BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 048533
         (591 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|255584314|ref|XP_002532893.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527353|gb|EEF29498.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 625

 Score =  902 bits (2331), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 426/573 (74%), Positives = 490/573 (85%)

Query: 1   MASLVALNSDTKFIKTISAIMLKGHWAKLLNPNIASSLTSTAIHKVLLNLYNCCHIPSLS 60
           MA++V L S+T+ ++ I A ++KG W  LL P I S LT++ +H+VL  L      P LS
Sbjct: 1   MAAVVTLRSETQLVQNICATVIKGGWNNLLRPKICSILTASTLHQVLYQLSLHSQGPCLS 60

Query: 61  CAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALV 120
            A FKW ES++PNYKHSLQS WTMIHILTK KH K+AQ++LEKIA RDFLST SVL+ALV
Sbjct: 61  WALFKWIESSIPNYKHSLQSSWTMIHILTKFKHLKTAQSLLEKIAYRDFLSTQSVLSALV 120

Query: 121 KIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRL 180
           ++HDDPD NSHV SWLVI YAN KM Q+ +QVF+ M V+   PHLHACTVLLNSLAKDRL
Sbjct: 121 RLHDDPDINSHVFSWLVIVYANTKMKQEAIQVFEHMMVNGFRPHLHACTVLLNSLAKDRL 180

Query: 181 TDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNT 240
           TDMVWKVYKKM ++GV ANIH+YNVLIHACCKS DV+K + LL EME K V  DLFTYNT
Sbjct: 181 TDMVWKVYKKMARIGVEANIHVYNVLIHACCKSGDVEKADNLLSEMESKCVFPDLFTYNT 240

Query: 241 LIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGAT 300
           LI+LYCKKGMHYEAL+VQDRMEREGI PDIVTYNSLIHGFC+EGRMREA RLF++I+ AT
Sbjct: 241 LISLYCKKGMHYEALSVQDRMEREGIKPDIVTYNSLIHGFCKEGRMREAMRLFKEIRDAT 300

Query: 301 PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRL 360
           PNHVTYTTLIDGYCR NDL++ALRLRE M A+G+YP VVTYNSILRKLC+ GRIRDAN+L
Sbjct: 301 PNHVTYTTLIDGYCRLNDLDQALRLREEMEAQGLYPTVVTYNSILRKLCEIGRIRDANKL 360

Query: 361 LNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCK 420
           LNEM+EKKI PDNVTCNTLINAYCKIGD  SA+KVKNRM+EAGL LDQFTYKALIHGFCK
Sbjct: 361 LNEMSEKKIEPDNVTCNTLINAYCKIGDMKSALKVKNRMVEAGLKLDQFTYKALIHGFCK 420

Query: 421 AKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSV 480
            +EMD AKELL  MLDAGFSPSYC+YSWLVDGYCN+ NEEA+LKL DEFV +GLCVD S+
Sbjct: 421 IREMDGAKELLLSMLDAGFSPSYCTYSWLVDGYCNQQNEEAVLKLPDEFVRKGLCVDKSL 480

Query: 481 YRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMY 540
           YRALIRRFCK+E+VDYA+++F+LMQ  G LGDSVIYTSLAYAYW+ G+  A SD+LD+MY
Sbjct: 481 YRALIRRFCKREQVDYAKKIFSLMQEKGTLGDSVIYTSLAYAYWKLGKANAASDLLDEMY 540

Query: 541 RRRLMITLKIYRSFSASYAKDNEILDLFWSHVV 573
           +RRLMITLKIYR+ +ASYA DN IL LFW+HVV
Sbjct: 541 KRRLMITLKIYRALNASYAGDNSILSLFWNHVV 573


>gi|224127568|ref|XP_002329310.1| predicted protein [Populus trichocarpa]
 gi|222870764|gb|EEF07895.1| predicted protein [Populus trichocarpa]
          Length = 593

 Score =  886 bits (2289), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 425/593 (71%), Positives = 498/593 (83%), Gaps = 6/593 (1%)

Query: 1   MASLVALNSDTKF-IKTISAIMLKGHWAKLLNPNIASS----LTSTA-IHKVLLNLYNCC 54
           MA+L  ++++T+  I++I A ++KG W  LL P   S+    +T+TA + +VLL+L    
Sbjct: 1   MATLTPISNETQLLIQSICASVIKGSWKNLLRPKFGSNDYHLITTTATVRQVLLHLSLYD 60

Query: 55  HIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS 114
             P LS A FKW ES+VPNYKHSLQS WTM++ILTK+KHFK+A   LE IA +DFLST S
Sbjct: 61  QSPCLSWALFKWIESSVPNYKHSLQSSWTMLYILTKHKHFKTAHAFLENIAFKDFLSTQS 120

Query: 115 VLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNS 174
           VL++LVKIHDDPD NSHVLSWLVI Y N KMT + +QVF+ MRV+   PHLHACTVLLNS
Sbjct: 121 VLSSLVKIHDDPDVNSHVLSWLVIVYGNSKMTHEAIQVFEHMRVNGFRPHLHACTVLLNS 180

Query: 175 LAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRAD 234
           LAKDRLTD VWK+YKKMV+LGVVANIH+YNVL+HACCKS DV+K EK+L EME K V  D
Sbjct: 181 LAKDRLTDTVWKIYKKMVKLGVVANIHVYNVLLHACCKSGDVEKAEKVLSEMELKCVFPD 240

Query: 235 LFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR 294
           LFTYNTLI+LYCKKGMHYEAL+VQDRME  GISPDI TYNSLI+GFCREGRMREA +LFR
Sbjct: 241 LFTYNTLISLYCKKGMHYEALSVQDRMEMAGISPDIFTYNSLIYGFCREGRMREAVQLFR 300

Query: 295 DIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRI 354
           DIK  TPNHVTYT+LIDGYCR NDL+EALRL+EVM+ KG+YP V+TYNSILRKLC+ GR+
Sbjct: 301 DIKDVTPNHVTYTSLIDGYCRVNDLDEALRLKEVMSEKGLYPTVITYNSILRKLCEGGRL 360

Query: 355 RDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKAL 414
           RDAN LLNEM+E+KI PDNVTCNTLINAYCKIGD  SA+KVK++M+ AGL LDQFTYKAL
Sbjct: 361 RDANILLNEMSERKIEPDNVTCNTLINAYCKIGDMRSALKVKDKMVGAGLKLDQFTYKAL 420

Query: 415 IHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGL 474
           IHGFCKAKE+D AKELLFGM+DAGFSPSYC+YSWLVD YC + NEEA++KL DE V RGL
Sbjct: 421 IHGFCKAKEIDKAKELLFGMMDAGFSPSYCTYSWLVDSYCKQQNEEAVIKLPDELVRRGL 480

Query: 475 CVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSD 534
           CVDVSVYRALIRRFCK EK+D AQR+  LM+  GI GDSV+YTSLAY YW+ G+    SD
Sbjct: 481 CVDVSVYRALIRRFCKIEKIDCAQRVLGLMKDKGIFGDSVVYTSLAYGYWKVGKVNVTSD 540

Query: 535 ILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKEMQ 587
           ILD+MY++RLMITLKIYRSF+ASYA DN IL LFW+HV++R LMSK+I K+MQ
Sbjct: 541 ILDEMYKKRLMITLKIYRSFNASYASDNSILSLFWNHVLERRLMSKNILKDMQ 593


>gi|225451899|ref|XP_002279045.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g38730-like [Vitis vinifera]
          Length = 590

 Score =  877 bits (2267), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 417/589 (70%), Positives = 497/589 (84%), Gaps = 7/589 (1%)

Query: 1   MASLVALNSDTKFIKTISAIMLKGHWAKLLNPNIASSLTSTAIHKVLLNLY--NCCHIPS 58
           MASLV    +T+  K +  I++KGHW  LL PN+ S+LTST +++VLLNL    CC    
Sbjct: 1   MASLVFQCGETQLAKIVCGIVVKGHWNSLLKPNVGSNLTSTILNQVLLNLSLDGCC---- 56

Query: 59  LSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNA 118
           +S AFFKW ES + N+KHSLQS WTMIH L K+K FK+AQN+LE+IA+RD+LS+PSVLNA
Sbjct: 57  VSWAFFKWVESNL-NHKHSLQSSWTMIHTLAKHKQFKTAQNLLERIAVRDYLSSPSVLNA 115

Query: 119 LVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKD 178
           +V+IHDDPD NS +LSWLVIFYAN +MTQD +QVF+ MRVH   PHLHACTVLLNSLAK 
Sbjct: 116 VVRIHDDPDSNSQILSWLVIFYANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKA 175

Query: 179 RLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTY 238
           RLT+MVWKVYKKMV++GVV NIH++NVLIHACCKS DV+K E+LL EME + +  DLFTY
Sbjct: 176 RLTNMVWKVYKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTY 235

Query: 239 NTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKG 298
           NTLI+LYCKKGMHYEAL +QDRMER G+SPDIVTYNSLI+GFCREGRMREA RLFR+I G
Sbjct: 236 NTLISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFREING 295

Query: 299 ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDAN 358
           ATPNHVTYTTLIDGYCR NDLEEALRLREVM  +G++PGVVTYNSILRKLC+EG+I+DAN
Sbjct: 296 ATPNHVTYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDAN 355

Query: 359 RLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGF 418
           RLLNEM+E+K+ PDNVTCNTLINAYCKIGD  SAMKVK +MLEAGL  DQFT+KALIHGF
Sbjct: 356 RLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGF 415

Query: 419 CKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDV 478
           CK  E+D AKE LF MLDAGFSPSY +YSWLVD Y +++N+EA+++L DE   +GL VD+
Sbjct: 416 CKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDI 475

Query: 479 SVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDD 538
           SVYRALIRR CK +K++ A+R+F LMQG G+ GDSV+YTSLAYAY++AG+  A SD+LD+
Sbjct: 476 SVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLDE 535

Query: 539 MYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKEMQ 587
           M +RRLMITLKIYR FSASYA D  IL LFW HV++R L+SK+I K +Q
Sbjct: 536 MDKRRLMITLKIYRCFSASYAGDGSILGLFWDHVIERRLISKNILKYIQ 584


>gi|147841262|emb|CAN75614.1| hypothetical protein VITISV_022293 [Vitis vinifera]
          Length = 590

 Score =  875 bits (2262), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 416/589 (70%), Positives = 496/589 (84%), Gaps = 7/589 (1%)

Query: 1   MASLVALNSDTKFIKTISAIMLKGHWAKLLNPNIASSLTSTAIHKVLLNLY--NCCHIPS 58
           MASLV    +T+  K +  I++KGHW  LL PN+ S+LTST +++VLLNL    CC    
Sbjct: 1   MASLVFQCGETQLAKIVCGIVVKGHWNSLLKPNVGSNLTSTILNQVLLNLSLDGCC---- 56

Query: 59  LSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNA 118
           +S AFFKW ES + N+ HSLQS WTMIH L K+K FK+AQN+LE+IA+RD+LS+PSVLNA
Sbjct: 57  VSWAFFKWVESNL-NHXHSLQSSWTMIHTLAKHKQFKTAQNLLERIAVRDYLSSPSVLNA 115

Query: 119 LVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKD 178
           +V+IHDDPD NS +LSWLVIFYAN +MTQD +QVF+ MRVH   PHLHACTVLLNSLAK 
Sbjct: 116 VVRIHDDPDSNSQILSWLVIFYANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKA 175

Query: 179 RLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTY 238
           RLT+MVWKVYKKMV++GVV NIH++NVLIHACCKS DV+K E+LL EME + +  DLFTY
Sbjct: 176 RLTNMVWKVYKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTY 235

Query: 239 NTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKG 298
           NTLI+LYCKKGMHYEAL +QDRMER G+SPDIVTYNSLI+GFCREGRMREA RLFR+I G
Sbjct: 236 NTLISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFREING 295

Query: 299 ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDAN 358
           ATPNHVTYTTLIDGYCR NDLEEALRLREVM  +G++PGVVTYNSILRKLC+EG+I+DAN
Sbjct: 296 ATPNHVTYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDAN 355

Query: 359 RLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGF 418
           RLLNEM+E+K+ PDNVTCNTLINAYCKIGD  SAMKVK +MLEAGL  DQFT+KALIHGF
Sbjct: 356 RLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGF 415

Query: 419 CKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDV 478
           CK  E+D AKE LF MLDAGFSPSY +YSWLVD Y +++N+EA+++L DE   +GL VD+
Sbjct: 416 CKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDI 475

Query: 479 SVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDD 538
           SVYRALIRR CK +K++ A+R+F LMQG G+ GDSV+YTSLAYAY++AG+  A SD+LD+
Sbjct: 476 SVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLDE 535

Query: 539 MYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKEMQ 587
           M +RRLMITLKIYR FSASYA D  IL LFW HV++R L+SK+I K +Q
Sbjct: 536 MDKRRLMITLKIYRCFSASYAGDGSILGLFWDHVIERRLISKNILKYIQ 584


>gi|449445409|ref|XP_004140465.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g38730-like [Cucumis sativus]
 gi|449518107|ref|XP_004166085.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g38730-like [Cucumis sativus]
          Length = 578

 Score =  818 bits (2113), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/575 (66%), Positives = 470/575 (81%), Gaps = 1/575 (0%)

Query: 13  FIKTISAIMLKGHWAKLLNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVP 72
            ++++ A+++KGHW  LL P I+SSLTS +IH++LL L   C  PSLS AFFKW E  +P
Sbjct: 4   LVQSMFAVVVKGHWNHLLKPKISSSLTSKSIHQILLRLSFYCSGPSLSWAFFKWVE-LIP 62

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHV 132
           +YKHSLQS W MI ILT++KHFK+AQ +LEKIA +DF+S+P VLNALV  +D+PD N+H+
Sbjct: 63  DYKHSLQSSWAMIFILTEHKHFKTAQGLLEKIAHKDFISSPLVLNALVTSYDNPDVNAHI 122

Query: 133 LSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMV 192
           LSWL+I Y N KM QD +QV + MR+H   P+LHACTVLLNSLAKDRLTD VWK YKKM+
Sbjct: 123 LSWLMIIYVNCKMPQDAIQVLEYMRLHGFKPNLHACTVLLNSLAKDRLTDTVWKSYKKMI 182

Query: 193 QLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHY 252
           ++GVV NIH+YNVLIHACCKS DV+K E+L+CEME K V  DL+TYNTLI+LY +K +HY
Sbjct: 183 RVGVVPNIHIYNVLIHACCKSGDVEKAEQLVCEMELKSVFPDLYTYNTLISLYSRKSLHY 242

Query: 253 EALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDG 312
           EAL VQDRMER G+SPDIVTYNSLI+GFC+EG+MREA +LFR+IK  +PNHVTYTTLIDG
Sbjct: 243 EALCVQDRMERAGVSPDIVTYNSLIYGFCKEGKMREAVKLFREIKDVSPNHVTYTTLIDG 302

Query: 313 YCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPD 372
           YCR ND EEALRL +VM AKG++ GV TYNS+LRKLC+EGRIRDAN+LLNEM E+K+ PD
Sbjct: 303 YCRVNDFEEALRLCKVMEAKGLHLGVATYNSVLRKLCEEGRIRDANKLLNEMGERKVEPD 362

Query: 373 NVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLF 432
           NVTCNTLINAYCKIGD  SA+KVK++ML+AGL LD FTYKALIHGFC  ++M+ AKELLF
Sbjct: 363 NVTCNTLINAYCKIGDMKSALKVKSKMLDAGLQLDSFTYKALIHGFCWVRDMESAKELLF 422

Query: 433 GMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKE 492
            MLD G SP YC+YSWLVDGYC   NE A++ LLDEF+++G CVD+SV RALIRR C +E
Sbjct: 423 CMLDVGLSPGYCTYSWLVDGYCELGNEGAIISLLDEFLTKGYCVDLSVCRALIRRLCHQE 482

Query: 493 KVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYR 552
           +V +A+++++ M   G+ GDSVIYTSLAYAYW+ G+    S++L +M +R L+I LK+YR
Sbjct: 483 RVGFAEKIYSTMHLRGVSGDSVIYTSLAYAYWKDGKSNLVSEMLSEMTKRSLLINLKLYR 542

Query: 553 SFSASYAKDNEILDLFWSHVVDRGLMSKHIFKEMQ 587
            F+ASY   N IL LFW HV +RGL+SK I KE+Q
Sbjct: 543 CFNASYGPHNSILHLFWDHVAERGLLSKSITKEIQ 577


>gi|356555026|ref|XP_003545840.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g38730-like [Glycine max]
          Length = 587

 Score =  808 bits (2088), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/586 (64%), Positives = 480/586 (81%), Gaps = 1/586 (0%)

Query: 4   LVALNSDTKFIKTISAIMLKGHWAKLLNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAF 63
           +V + S  +F+ ++ +I++KGHW  LL    AS+LTS+ IHKVLL L    +  S S  F
Sbjct: 1   MVLIGSHNQFVDSVCSIVVKGHWGNLLKVKNASALTSSTIHKVLLQLSLYGYGLSHSFPF 60

Query: 64  FKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIH 123
           FKW +S +P+Y HSLQ  W MIHILT++KHFK+AQ++LEKIA +DFLS+PSVL+ LV+ H
Sbjct: 61  FKWLDS-IPHYSHSLQCSWAMIHILTEHKHFKTAQHVLEKIAHKDFLSSPSVLSTLVRTH 119

Query: 124 DDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDM 183
           D+ + NS VLSWLVI YA  KMTQD +QVF+QMR+H + PHLHACTVLLNSL KD +T M
Sbjct: 120 DNQEVNSQVLSWLVIHYAKSKMTQDAIQVFEQMRLHEVKPHLHACTVLLNSLLKDGVTHM 179

Query: 184 VWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIA 243
           VWK+YK+MVQ+GVV NI++YN L HAC KS DV++ E+LL EM+ K V  D+FTYNTL++
Sbjct: 180 VWKIYKRMVQVGVVPNIYIYNCLFHACSKSGDVERAEQLLNEMDVKGVLQDIFTYNTLLS 239

Query: 244 LYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGATPNH 303
           LYCKKGMHYEAL++Q+RMEREGI+ DIV+YNSLI+GFC+EGRMREA R+F +IK ATPNH
Sbjct: 240 LYCKKGMHYEALSIQNRMEREGINLDIVSYNSLIYGFCKEGRMREAMRMFSEIKNATPNH 299

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
           VTYTTLIDGYC+ N+LEEAL++ ++M AKG+YPGVVTYNSILRKLC++GRIRDAN+LLNE
Sbjct: 300 VTYTTLIDGYCKTNELEEALKMCKLMEAKGLYPGVVTYNSILRKLCQDGRIRDANKLLNE 359

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
           M+E+K+  DN+TCNTLINAYCKIGD  SA+K KN+MLEAGL  D FTYKALIHGFCK  E
Sbjct: 360 MSERKLQADNITCNTLINAYCKIGDLKSALKFKNKMLEAGLKPDPFTYKALIHGFCKTNE 419

Query: 424 MDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRA 483
           ++ AKEL+F MLDAGF+PSYC+YSW+VDGY  K+N +A+L L DEF+SRG+C+DVSVYRA
Sbjct: 420 LESAKELMFSMLDAGFTPSYCTYSWIVDGYNKKDNMDAVLALPDEFLSRGICLDVSVYRA 479

Query: 484 LIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRR 543
           LIR  CK E++  A+RLF  M+G GI G+SVIYTS+AYAYW  G   A S +L++M RRR
Sbjct: 480 LIRSSCKVERIQCAERLFYHMEGKGISGESVIYTSIAYAYWNVGNVSAASSMLEEMARRR 539

Query: 544 LMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKEMQLR 589
           LMIT+K+YR FS S A +N++  +FW+HV+DRGLMS++   ++Q +
Sbjct: 540 LMITVKLYRCFSTSDANENKVSQIFWNHVMDRGLMSRNTMNKIQQK 585


>gi|357515141|ref|XP_003627859.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355521881|gb|AET02335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 731

 Score =  801 bits (2069), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/588 (64%), Positives = 480/588 (81%), Gaps = 2/588 (0%)

Query: 1   MASLVALNSDTK-FIKTISAIMLKGHWAKLLNPNIASSLTSTAIHKVLLNLYNCCHIPSL 59
           M S++ + +  K  I+++ AI++KG W  LL P  AS+LTST IH+V+L+L    + P  
Sbjct: 1   MKSMLMIETSNKHLIESVCAIIVKGDWNNLLKPKTASTLTSTTIHQVILHLKQHRYEPFF 60

Query: 60  SCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNAL 119
              FFKWA+S +P+Y HSL S W+MIH+LTK++HFK+AQ +L+K+A R+ LS+PSVL +L
Sbjct: 61  IFHFFKWAQS-IPHYTHSLHSSWSMIHMLTKHRHFKTAQQVLDKMAQREILSSPSVLTSL 119

Query: 120 VKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDR 179
           V+IHDDP+ NSHVLSW+VI YA  KMT D +QVF+QM + NL PHLHACTVL+NSL KD 
Sbjct: 120 VRIHDDPEVNSHVLSWIVIHYAKSKMTHDAVQVFEQMSLCNLKPHLHACTVLMNSLLKDG 179

Query: 180 LTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYN 239
           +T MVWKVYK+MVQ GVV NI++YN LIHAC KS DV++ E +L EME K V  D+FTYN
Sbjct: 180 ITSMVWKVYKRMVQDGVVPNIYVYNCLIHACSKSRDVERAEFILNEMEVKGVVPDIFTYN 239

Query: 240 TLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGA 299
           TLIALYCKKG+HYEAL+VQD+MEREGI+ DIV+YNSLI+GFC+EG+MREA R+F +IK A
Sbjct: 240 TLIALYCKKGLHYEALSVQDKMEREGINLDIVSYNSLIYGFCKEGKMREAMRMFGEIKDA 299

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
            PNHVTYTTLIDGYC+AN+ EEALRLRE+M AKG+YPGVVTYNSILRKLC +GRIRDAN+
Sbjct: 300 IPNHVTYTTLIDGYCKANEFEEALRLREMMVAKGLYPGVVTYNSILRKLCSDGRIRDANK 359

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
           LL+EM+E+K+  D+VTCNTLINAYCKIGD  SA+K K +MLEAGL  + FTYKALIHGFC
Sbjct: 360 LLHEMSERKVQADSVTCNTLINAYCKIGDLNSALKFKTKMLEAGLTPNSFTYKALIHGFC 419

Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
           K  E++ AKELLFGMLDAGFSP+Y +YSW+VD YC K+N +A+L L DEF+S+G C+++S
Sbjct: 420 KTSELESAKELLFGMLDAGFSPNYRTYSWIVDSYCKKDNTDAVLALPDEFLSKGFCLNIS 479

Query: 480 VYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
           +YRALIRR CK E+++ A++L   M+G GI GDSVIYTSLA++YW++G   A SD+L++M
Sbjct: 480 LYRALIRRLCKIERIECAEKLLYHMEGKGISGDSVIYTSLAFSYWKSGNTNAASDMLEEM 539

Query: 540 YRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKEMQ 587
            RRRLMIT+KIYR FSA  A  N++  +FW HVV+RGLMS++   ++Q
Sbjct: 540 ARRRLMITVKIYRCFSALDASQNKVSQMFWDHVVERGLMSRNTMYKIQ 587


>gi|15240991|ref|NP_198689.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171307|sp|Q9FKR3.1|PP404_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g38730
 gi|10176899|dbj|BAB10131.1| unnamed protein product [Arabidopsis thaliana]
 gi|332006971|gb|AED94354.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 596

 Score =  753 bits (1945), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 361/591 (61%), Positives = 456/591 (77%), Gaps = 6/591 (1%)

Query: 1   MASLVALNSDTKFIKTISAIMLKGHWAKLLNPNIASSLTSTAIHKVL---LNLYNCCHIP 57
           M +L++ N +    ++I A +LKG+W  +L   + S L  +AI   +   L+L++    P
Sbjct: 1   MVNLLSANREALIAQSICATVLKGNWKNILKHKVDSGLLKSAITTQVISELSLFSGYGGP 60

Query: 58  SLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLN 117
           SLS +FF W +S +P+ KHSLQS W MI ILTK+KHFK+A  +L+K+A R+ LS+P VL 
Sbjct: 61  SLSWSFFIWTDS-LPSSKHSLQSSWKMILILTKHKHFKTAHQLLDKLAQRELLSSPLVLR 119

Query: 118 ALVK-IHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLA 176
           +LV  + +DP+  SHV SWL+I+YA   M  D + VF+Q+R   L PHL ACTVLLNSL 
Sbjct: 120 SLVGGVSEDPEDVSHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLV 179

Query: 177 KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLF 236
           K RLTD VWK++KKMV+LGVVANIH+YNVL+HAC KS D +K EKLL EME K V  D+F
Sbjct: 180 KQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIF 239

Query: 237 TYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI 296
           TYNTLI++YCKK MH+EAL+VQDRMER G++P+IVTYNS IHGF REGRMREA RLFR+I
Sbjct: 240 TYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREI 299

Query: 297 KG-ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIR 355
           K   T NHVTYTTLIDGYCR ND++EALRLREVM ++G  PGVVTYNSILRKLC++GRIR
Sbjct: 300 KDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIR 359

Query: 356 DANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALI 415
           +ANRLL EM+ KKI PDN+TCNTLINAYCKI D  SA+KVK +M+E+GL LD ++YKALI
Sbjct: 360 EANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALI 419

Query: 416 HGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLC 475
           HGFCK  E++ AKE LF M++ GFSP Y +YSWLVDG+ N+N ++ + KLL+EF  RGLC
Sbjct: 420 HGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLC 479

Query: 476 VDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDI 535
            DV++YR LIRR CK E+VDYA+ LF  M+  G++GDSVI+T++AYAYWR G+    S +
Sbjct: 480 ADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASAL 539

Query: 536 LDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKEM 586
            D MY RRLM+ LK+Y+S SASYA DN++L  FWSHV DR L+SK I +EM
Sbjct: 540 FDVMYNRRLMVNLKLYKSISASYAGDNDVLRFFWSHVGDRCLISKSILREM 590


>gi|297805886|ref|XP_002870827.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297316663|gb|EFH47086.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 582

 Score =  733 bits (1891), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 353/578 (61%), Positives = 446/578 (77%), Gaps = 6/578 (1%)

Query: 1   MASLVALNSDTKFIKTISAIMLKGHWAKLLNPNIASSL-TSTAIHKVL--LNLYNCCHIP 57
           M +L++ N +    ++I A +LKG+W  +L   + S L  S+ I +V+  L+LY+    P
Sbjct: 1   MVNLLSANREALIAQSICATVLKGNWKNILKHKVDSGLLKSSIITQVISELSLYSGYGGP 60

Query: 58  SLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLN 117
           SLS +F+ W +S +P+ KHSLQS W MI ILTK+ HFK+A  +L+K++ R+ LS+P VL 
Sbjct: 61  SLSWSFYSWTDS-LPSCKHSLQSSWKMILILTKHNHFKTAHQLLDKLSQRELLSSPLVLR 119

Query: 118 ALVK-IHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLA 176
           +LV  + +DP+  SHV SWL+IFYA   M  D + VF+Q+    L PHL ACTVLLNSL 
Sbjct: 120 SLVGGVSEDPEVLSHVFSWLMIFYAKSGMINDSIAVFEQIMSCGLKPHLQACTVLLNSLV 179

Query: 177 KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLF 236
           K+RLTD VWK++KKMV+LGVVANIH+YNVL+HAC KS D +K EKLL EME K V  D+F
Sbjct: 180 KERLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDSEKAEKLLSEMEEKGVFPDIF 239

Query: 237 TYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI 296
           TYNTLI++YCKK MH+EAL+VQDRMER G++PDIVTYNSLIHGF REGRMREA RLFR I
Sbjct: 240 TYNTLISVYCKKSMHFEALSVQDRMERSGVAPDIVTYNSLIHGFSREGRMREATRLFRKI 299

Query: 297 KGAT-PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIR 355
           KG    NHVTYTTLIDGYCR ND++EALRLREVM ++G  PGVVTYNSILRKLC++GRIR
Sbjct: 300 KGVVMANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFCPGVVTYNSILRKLCEDGRIR 359

Query: 356 DANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALI 415
           +ANRLL EM+ KKI PDN+TCNTLINAYCKI D  SA+KVK +M+E+GL LD ++YKALI
Sbjct: 360 EANRLLTEMSVKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALI 419

Query: 416 HGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLC 475
           HGFCK  E+D AKE LF M++ G SP Y +YSWLVDG+ N+N ++ + KL +EF  RGLC
Sbjct: 420 HGFCKVLELDNAKEELFSMIEKGLSPGYSAYSWLVDGFYNQNKQDEITKLPEEFEKRGLC 479

Query: 476 VDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDI 535
            DV++YR LIRR CK E+VDYA+ LF  M+  G++GDSVIYT++AYAYWR G+    S +
Sbjct: 480 PDVALYRGLIRRICKLEQVDYAKVLFESMEKKGLMGDSVIYTTMAYAYWRTGKVTDASAL 539

Query: 536 LDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVV 573
            D MY RRLM+ LK+Y+S SASYA DN++L  FWSH++
Sbjct: 540 FDVMYNRRLMVNLKLYKSLSASYAGDNDVLRFFWSHLM 577


>gi|298204410|emb|CBI16890.3| unnamed protein product [Vitis vinifera]
          Length = 653

 Score =  647 bits (1670), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 329/592 (55%), Positives = 422/592 (71%), Gaps = 45/592 (7%)

Query: 1   MASLVALNSDTKFIKTISAIMLKGHWAKLLNPNIASSLTSTAIHKVLLNLY--NCCHIPS 58
           MASLV    +T+  K +  I++KGHW  LL PN+ S+LTST +++VLLNL    CC    
Sbjct: 26  MASLVFQCGETQLAKIVCGIVVKGHWNSLLKPNVGSNLTSTILNQVLLNLSLDGCC---- 81

Query: 59  LSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNA 118
           +S AFFKW ES + N+KHSLQS WTMIH L K+K FK+AQN+LE+IA+RD+LS+PSVLNA
Sbjct: 82  VSWAFFKWVESNL-NHKHSLQSSWTMIHTLAKHKQFKTAQNLLERIAVRDYLSSPSVLNA 140

Query: 119 LVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKD 178
           +V+IHDDPD NS +LSWLVIFYAN +MTQD +QVF+ MRVH   PHLHACTVLLNSLAK 
Sbjct: 141 VVRIHDDPDSNSQILSWLVIFYANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKA 200

Query: 179 RLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTY 238
           RLT+MVWKVYKKMV++GVV NIH++NVLIHACCKS DV+K E+LL EME + +  DLFTY
Sbjct: 201 RLTNMVWKVYKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTY 260

Query: 239 NTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCRE-GRMREARRL--FRD 295
           NTLI+LYCKKGMHYEAL +QDRMER G+SPDIVTYNSLI+GFCRE   + EA RL    +
Sbjct: 261 NTLISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREVNDLEEALRLREVME 320

Query: 296 IKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIR 355
           ++G  P  VTY +++   C    +++A RL   M+ + V P  VT N+++   CK G + 
Sbjct: 321 VEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMG 380

Query: 356 DANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALI 415
            A ++  +M E  + PD  T   LI+ +CK+ +  SA +    ML+A             
Sbjct: 381 SAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDA------------- 427

Query: 416 HGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLC 475
                                 GFSPSY +YSWLVD Y +++N+EA+++L DE   +GL 
Sbjct: 428 ----------------------GFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLF 465

Query: 476 VDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDI 535
           VD+SVYRALIRR CK +K++ A+R+F LMQG G+ GDSV+YTSLAYAY++AG+  A SD+
Sbjct: 466 VDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDM 525

Query: 536 LDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKEMQ 587
           LD+M +RRLMITLKIYR FSASYA D  IL LFW HV++R L+SK+I K +Q
Sbjct: 526 LDEMDKRRLMITLKIYRCFSASYAGDGSILGLFWDHVIERRLISKNILKYIQ 577


>gi|413939576|gb|AFW74127.1| hypothetical protein ZEAMMB73_460696 [Zea mays]
          Length = 581

 Score =  537 bits (1383), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 261/541 (48%), Positives = 369/541 (68%), Gaps = 15/541 (2%)

Query: 50  LYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKN-KHFKSAQNMLEKIALRD 108
           L+    +PS + AFF+    A+P   H L +   ++ +L  + +H  +A+ +L  ++LR 
Sbjct: 39  LHRLSPLPSAALAFFR----ALPP-PHPLDASLAVLRLLAPHPRHHTAARALLRDLSLRH 93

Query: 109 FLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHAC 168
            LS+P +L +L+          HV SWLV+  A      D ++VFD MR   L P  HAC
Sbjct: 94  PLSSPLLLPSLL-------AGPHVPSWLVLVLAQSARPHDAVRVFDHMRARGLAPDAHAC 146

Query: 169 TVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEF 228
           T LL +LA+ R+T    +V+ +M + G+ A  H+YN ++H C K+ D  + E ++  M+ 
Sbjct: 147 TALLTALARARMTATARRVFDEMARAGLAATTHVYNAMLHVCLKAGDAAQAEAIVTRMDA 206

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
             V  D F+YNT+IALYC+KGM YEA+  +DRM++EGI PD VT+NS IHG C+EGR++E
Sbjct: 207 AGVTLDRFSYNTVIALYCRKGMGYEAMCARDRMDKEGIRPDTVTWNSSIHGLCKEGRVKE 266

Query: 289 ARRLFRDIKGA--TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILR 346
           A +LF ++  A  TP++VTYTTLIDGYCRA ++EEA++LR  M A G+ PGV TYN+ILR
Sbjct: 267 AAQLFTEMVAAQATPDNVTYTTLIDGYCRAGNVEEAVKLRGRMEAAGMLPGVATYNAILR 326

Query: 347 KLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLML 406
           KLC++G +++ +RLL+EM+ +K+  D+VTCNTLINAYCK GD  SA KVK +M+E+GL L
Sbjct: 327 KLCEDGNMKEVHRLLHEMDGRKVQADHVTCNTLINAYCKRGDMTSACKVKKKMMESGLQL 386

Query: 407 DQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLL 466
           + FTYKALIHGFCKA+E+D AKE  F M+DAGFSP+Y  +SWLVDG+C KNN +A+L + 
Sbjct: 387 NHFTYKALIHGFCKARELDGAKEAFFQMVDAGFSPNYSVFSWLVDGFCKKNNADAVLAIP 446

Query: 467 DEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRA 526
           DE + RGL  D +VYR+LIRR C+K  VD AQR+F+ MQ  G++GDS++Y +LAY Y   
Sbjct: 447 DELMKRGLPPDKAVYRSLIRRLCRKGLVDQAQRVFDQMQSKGLVGDSLVYATLAYTYLTK 506

Query: 527 GEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKEM 586
           G P A  + LD M + +L IT +IY     SYA + E L++ W   ++RGL+ K ++K M
Sbjct: 507 GNPTAALNTLDGMTKNQLYITPQIYNCLCTSYADEKETLNMLWVRAIERGLIKKSVYKLM 566

Query: 587 Q 587
            
Sbjct: 567 H 567


>gi|242067062|ref|XP_002454820.1| hypothetical protein SORBIDRAFT_04g038070 [Sorghum bicolor]
 gi|241934651|gb|EES07796.1| hypothetical protein SORBIDRAFT_04g038070 [Sorghum bicolor]
          Length = 600

 Score =  533 bits (1373), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 256/498 (51%), Positives = 353/498 (70%), Gaps = 7/498 (1%)

Query: 92  KHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQ 151
           +H  +A+ +L  ++LR  LS+P +L +L+   D       V SWLV+  A      D L+
Sbjct: 81  RHHPAARALLRDLSLRHPLSSPLLLPSLLAAAD-----PRVPSWLVLVLAQSARPHDALR 135

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           VFDQMR   L P  HACT LL +LA+ R+T    +V+ +M + G+  + H+YN ++H C 
Sbjct: 136 VFDQMRARGLAPDAHACTALLTALARARMTATARRVFDEMARAGLAVSTHVYNAMLHVCL 195

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           K+ D  + E L+  M+   V  D F+YNT+IALYCKKGM YEA+ V+DRM++EGI  D V
Sbjct: 196 KAGDAARAEALVTRMDAAGVPLDRFSYNTVIALYCKKGMRYEAMCVRDRMDKEGIRADTV 255

Query: 272 TYNSLIHGFCREGRMREARRLFRDIKGA--TPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           T+NSLIHG C+ GR++EA +LF ++  A  TP++VTYTTLIDGYCRA ++EEA++LR  M
Sbjct: 256 TWNSLIHGLCKYGRVKEAAQLFTEMAAAQATPDNVTYTTLIDGYCRAGNIEEAVKLRGEM 315

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
            A G+ PGV TYN+ILRKLC++G++++ N+LLNEM+E+K+  D+VTCNTLINAYCK G  
Sbjct: 316 EATGMLPGVATYNAILRKLCEDGKMKEVNQLLNEMDERKVQADHVTCNTLINAYCKRGHM 375

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
            SA KVK +M+E+GL L+QFTYKALIHGFCKAKE+D AKE  F M+DAGFSP+Y  +SWL
Sbjct: 376 TSACKVKKKMMESGLQLNQFTYKALIHGFCKAKELDEAKEAFFQMVDAGFSPNYSVFSWL 435

Query: 450 VDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGI 509
           VDG+C KNN +A+L + DE + RGL  D +VYR+LIRR C+K  VD AQ++F+ MQ  G+
Sbjct: 436 VDGFCKKNNADAVLLIPDELMKRGLPPDKAVYRSLIRRLCRKGLVDQAQKVFDQMQSKGL 495

Query: 510 LGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFW 569
           +GDS++Y +LAY Y   G+P A S+ LD M + +L IT +IY     SYA + E L++ W
Sbjct: 496 VGDSLVYATLAYTYLTEGKPVAASNTLDGMAKNQLYITPQIYNCLCTSYADEKETLNILW 555

Query: 570 SHVVDRGLMSKHIFKEMQ 587
              ++RGL+ K ++K M 
Sbjct: 556 VRAIERGLIKKSVYKLMH 573


>gi|48716454|dbj|BAD23061.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           [Oryza sativa Japonica Group]
          Length = 580

 Score =  528 bits (1361), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 268/565 (47%), Positives = 371/565 (65%), Gaps = 22/565 (3%)

Query: 34  IASSLTSTAIHKVLLN---------LYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTM 84
           I S+LT    H  LL          L+    +PS + AFF+      P            
Sbjct: 16  IKSTLTQPHNHHHLLAASPSLLAAVLHRLSPLPSTALAFFRSLPPPHPLDASLALLRLLA 75

Query: 85  IHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLK 144
            H     +H  +A+++L  ++LR  LS+P +L +L+    DP    H+ SWL++  +   
Sbjct: 76  PH----PRHHPTARSLLRDLSLRHPLSSPLLLPSLLA---DP----HLPSWLLLLLSQSA 124

Query: 145 MTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYN 204
              D L+VFD MR   ++P  HA + LL +LAK R+T    KV+ +M + GV  N H+YN
Sbjct: 125 RPHDALRVFDHMRAREVVPDAHASSALLTALAKSRMTATARKVFDQMTRAGVAMNTHVYN 184

Query: 205 VLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMERE 264
            ++H C K+ D    E L+  M+   V  D F++NT+IALYC+KGM YEA+ V++RME +
Sbjct: 185 AMLHVCLKAGDAALAESLMTRMDAAGVPLDRFSFNTVIALYCRKGMQYEAMCVRERMENQ 244

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           G+  D+VT+NSLIHG C+E R++EA +L R++   G  P+HVTYTTL+DGYCRA DLEEA
Sbjct: 245 GVKADVVTWNSLIHGLCKERRVKEASQLLREMAMAGVAPDHVTYTTLVDGYCRAGDLEEA 304

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
           ++LR  M A G+ PGV TYN+ILRKLC++G++++ N LLNEM+E+K+  D+VTCNTLINA
Sbjct: 305 VKLRGEMEAMGMLPGVATYNAILRKLCEDGKMKEVNVLLNEMDERKVQADHVTCNTLINA 364

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           YCK GD  SA+KVK RM+E+GL LDQFTYKAL+HGFCKAKE+D AKE LF M+ AGFSP+
Sbjct: 365 YCKRGDMTSALKVKRRMMESGLQLDQFTYKALVHGFCKAKELDEAKEALFEMMGAGFSPN 424

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
           Y   SW+VDG CNKNN  A+L + DE + RG   D +VYR+LIRR CKK  +D A  +FN
Sbjct: 425 YSVLSWIVDGLCNKNNAVAVLAIPDELMKRGFPPDKAVYRSLIRRLCKKGFIDLAGNVFN 484

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDN 562
            MQG G+  D ++Y +LA AY  AG+P A  DIL++M +++L IT +IY     SYA + 
Sbjct: 485 EMQGKGLEADCLVYATLACAYLTAGKPVAALDILNEMAKKQLYITPQIYNCMCTSYADEK 544

Query: 563 EILDLFWSHVVDRGLMSKHIFKEMQ 587
             L++ W H ++RGL++K ++K M 
Sbjct: 545 GSLNMLWVHAIERGLITKSVYKVMH 569


>gi|326505288|dbj|BAK03031.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326529675|dbj|BAK04784.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 597

 Score =  525 bits (1351), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 257/535 (48%), Positives = 364/535 (68%), Gaps = 15/535 (2%)

Query: 56  IPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKN-KHFKSAQNMLEKIALRDFLSTPS 114
           +PS++ +FF+    A+P   H L +   ++ +L  + +H   A+ +L  ++LR  LS+P 
Sbjct: 46  LPSVALSFFR----ALPP-PHPLDASLALVRLLAAHPRHHPVARTLLRDLSLRHPLSSPL 100

Query: 115 VLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNS 174
           +L +L+          H+ SWL++  A      D ++VFD MR   L P  HACT LL S
Sbjct: 101 LLPSLL-------AEPHLPSWLLLALAQGGRAGDAVRVFDHMRAEGLAPDAHACTALLTS 153

Query: 175 LAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRAD 234
           LA+ R+T    +V+  M + GV  N H+YN ++H C K+ D  + E L+  M+   V  D
Sbjct: 154 LARARMTATARRVFDGMGRAGVAMNTHVYNAMLHVCLKAGDAARAEALMTRMDATGVPLD 213

Query: 235 LFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR 294
           LF++NT IALY +KGM YEA+ V+DRM  +G+  DIVT+N++IHG C+EGRM+EA +L R
Sbjct: 214 LFSFNTAIALYVRKGMQYEAMCVRDRMANDGVEADIVTWNTVIHGMCKEGRMKEASQLHR 273

Query: 295 DI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEG 352
           D+   G  P+ VTYTTL+DGYCRA D+ EA+ LR VM A+G+ PGV TYN+I+RKLC++G
Sbjct: 274 DMVAAGIEPDTVTYTTLVDGYCRAGDVGEAMNLRAVMEARGMLPGVATYNAIIRKLCEDG 333

Query: 353 RIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYK 412
           ++++ N LL+EM+E+K+  D+VTCNTLIN+Y K GD  SA KVK RM+E+GL LDQFTYK
Sbjct: 334 KMKEVNGLLSEMDERKVQADHVTCNTLINSYSKKGDMPSACKVKTRMMESGLQLDQFTYK 393

Query: 413 ALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSR 472
           ALIHGF KAK++D AKE LF M+ AGFSP+Y  +SWLVDG+  +NN +A+L + DE + R
Sbjct: 394 ALIHGFSKAKQLDEAKEALFEMMGAGFSPNYSVFSWLVDGFYKRNNADAVLLIPDELMKR 453

Query: 473 GLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKAC 532
           GL  D SVYR+LIRR CKK  VD AQ++ + MQG G+  D ++Y SLAYA   AG+  A 
Sbjct: 454 GLPPDKSVYRSLIRRLCKKRLVDLAQKVLHQMQGKGLEADCLVYASLAYAQLTAGKLAAA 513

Query: 533 SDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKEMQ 587
           SD L+DM +++L +T +IY     SY  + + L++FW H ++RGL+ K ++K M 
Sbjct: 514 SDTLNDMAKKQLSVTPQIYNCLCTSYGDEKQTLNMFWVHAIERGLIGKSVYKLMH 568


>gi|357144033|ref|XP_003573143.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g38730-like [Brachypodium distachyon]
          Length = 599

 Score =  515 bits (1327), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 254/542 (46%), Positives = 362/542 (66%), Gaps = 15/542 (2%)

Query: 50  LYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDF 109
           +++   +PS + AFF+      P             H     +H  +A+  +  ++LR  
Sbjct: 40  IHSLSPLPSSALAFFRALPPPHPLEASLALLRLLAPH----PRHHPAARAFILDLSLRHP 95

Query: 110 LSTPSVLNALVKIHDDPDGNSHVLSWLVIF--YANLKMTQDGLQVFDQMRVHNLMPHLHA 167
           LS+P +L +L+          HV SWL++   +++     D  +VFDQMR   L P  HA
Sbjct: 96  LSSPLLLPSLLS-------EPHVPSWLLLALSHSHSARPHDAARVFDQMRARGLAPDAHA 148

Query: 168 CTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEME 227
           CT LL +LA+ R+T    KV+ +M + GV  N H+YN ++H C K+ D  + E L+  M+
Sbjct: 149 CTALLTALARARMTATAHKVFNEMGRAGVAMNTHVYNAMLHVCLKARDALRAEGLMTRMD 208

Query: 228 FKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMR 287
              V  D F++NT+IALY +KGM YEA+ V++RM+ EG+ PDIVT+N++IHG C+EGRM+
Sbjct: 209 AAGVPLDRFSFNTVIALYVRKGMQYEAMCVRERMQDEGVEPDIVTWNTVIHGLCKEGRMK 268

Query: 288 EARRLFRDIKGAT--PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSIL 345
           EA +L  D+  A   P+ VTYTTL+DGYCR  D+ EA++LRE M A G+ PGV TYN+I+
Sbjct: 269 EAAQLRTDMIAAAVEPDTVTYTTLVDGYCRIGDVGEAVKLREEMEAGGMVPGVATYNAII 328

Query: 346 RKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLM 405
           RKLC++G++++ N LL+EM+ +K+  D+VTCNTLIN+Y K GD  SA KVK RM+E+GL 
Sbjct: 329 RKLCEDGKMKEVNGLLSEMDGRKVQADHVTCNTLINSYAKRGDMTSACKVKKRMMESGLQ 388

Query: 406 LDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKL 465
           LDQFTYKALIHGFCKAKE+D AKE LF M+  GFSP+Y  +SWLVDG+C KNN +A+L +
Sbjct: 389 LDQFTYKALIHGFCKAKELDEAKEALFEMMGRGFSPNYSVFSWLVDGFCKKNNTDAVLLI 448

Query: 466 LDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWR 525
            DE + RGL  D SVYR+LIRR CKK  VD AQ++ + MQG G+  D ++Y +LAYA+  
Sbjct: 449 PDELIKRGLPPDKSVYRSLIRRLCKKGLVDLAQKVLHQMQGKGLEVDCLVYATLAYAHLT 508

Query: 526 AGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKE 585
           AG+  A SDIL++M R+++ +T +IY     SY  +   L++FW H ++RGL++K ++K 
Sbjct: 509 AGKVAAASDILNEMARKQMSVTPQIYNCLCTSYGDEKATLNMFWVHTIERGLIAKSVYKL 568

Query: 586 MQ 587
           M 
Sbjct: 569 MH 570


>gi|218191860|gb|EEC74287.1| hypothetical protein OsI_09537 [Oryza sativa Indica Group]
          Length = 689

 Score =  491 bits (1264), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 245/471 (52%), Positives = 333/471 (70%), Gaps = 10/471 (2%)

Query: 95  KSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFD 154
           KSA+++L  ++LR  LS+P +L +L+    DP    H+ SWL++  +      D L+VFD
Sbjct: 174 KSARSLLRDLSLRHPLSSPLLLPSLLA---DP----HLPSWLLLLLSQSARPHDALRVFD 226

Query: 155 QMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSS 214
            MR   ++P  HA + LL +LAK R+T    KV+ +M + GV  N H+YN ++H C K+ 
Sbjct: 227 HMRAREVVPDAHASSALLTALAKSRMTATARKVFDQMTRAGVAMNTHVYNAMLHVCLKAG 286

Query: 215 DVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYN 274
           D    E L+  M+   V  D F++NT+IALYC+KGM YEA+ V++RME +G+  D+VT+N
Sbjct: 287 DAALAESLMTRMDAAGVPLDRFSFNTVIALYCRKGMQYEAMCVRERMENQGVKADVVTWN 346

Query: 275 SLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAK 332
           SLIHG C+E R++EA +L R++   G  P+HVTYTTL+DGYCRA DLEEA++LR  M A 
Sbjct: 347 SLIHGLCKERRVKEASQLLREMAMAGVAPDHVTYTTLVDGYCRAGDLEEAVKLRGEMEAM 406

Query: 333 GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
           G+ PGV TYN+ILRKLC++G++++ N LLNEM+E+K+  D+VTCNTLINAYCK GD  SA
Sbjct: 407 GMLPGVATYNAILRKLCEDGKMKEVNVLLNEMDERKVQADHVTCNTLINAYCKRGDMTSA 466

Query: 393 MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
           +KVK RM+E+GL LDQFTYKAL+HGFCKAKE+D AKE LF M+ AGFSP+Y   SW+VDG
Sbjct: 467 LKVKRRMMESGLQLDQFTYKALVHGFCKAKELDEAKEALFEMMGAGFSPNYSVLSWIVDG 526

Query: 453 YCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGD 512
            CNKNN  A+L + DE + RG   D +VYR+LIRR CKK  +D A  +FN MQG G+  D
Sbjct: 527 LCNKNNAVAVLAIPDELMKRGFPPDKAVYRSLIRRLCKKGFIDLAGNVFNEMQGKGLEAD 586

Query: 513 SVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYR-SFSASYAKDN 562
            ++Y +LA AY  AG+P A  DIL++M +++L IT +IY    S  +A D 
Sbjct: 587 CLVYATLACAYLTAGKPVAALDILNEMAKKQLYITPQIYNYKSSCKFAGDG 637



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 78/285 (27%), Positives = 131/285 (45%), Gaps = 2/285 (0%)

Query: 282 REGRMREARRLFRDIKG--ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVV 339
           +  R  +A R+F  ++     P+    + L+    ++     A ++ + M   GV     
Sbjct: 214 QSARPHDALRVFDHMRAREVVPDAHASSALLTALAKSRMTATARKVFDQMTRAGVAMNTH 273

Query: 340 TYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRM 399
            YN++L    K G    A  L+  M+   +  D  + NT+I  YC+ G    AM V+ RM
Sbjct: 274 VYNAMLHVCLKAGDAALAESLMTRMDAAGVPLDRFSFNTVIALYCRKGMQYEAMCVRERM 333

Query: 400 LEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNE 459
              G+  D  T+ +LIHG CK + +  A +LL  M  AG +P + +Y+ LVDGYC   + 
Sbjct: 334 ENQGVKADVVTWNSLIHGLCKERRVKEASQLLREMAMAGVAPDHVTYTTLVDGYCRAGDL 393

Query: 460 EALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
           E  +KL  E  + G+   V+ Y A++R+ C+  K+     L N M    +  D V   +L
Sbjct: 394 EEAVKLRGEMEAMGMLPGVATYNAILRKLCEDGKMKEVNVLLNEMDERKVQADHVTCNTL 453

Query: 520 AYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
             AY + G+  +   +   M    L +    Y++    + K  E+
Sbjct: 454 INAYCKRGDMTSALKVKRRMMESGLQLDQFTYKALVHGFCKAKEL 498



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 58/235 (24%), Positives = 116/235 (49%), Gaps = 2/235 (0%)

Query: 350 KEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQF 409
           +  R  DA R+ + M  +++ PD    + L+ A  K   TA+A KV ++M  AG+ ++  
Sbjct: 214 QSARPHDALRVFDHMRAREVVPDAHASSALLTALAKSRMTATARKVFDQMTRAGVAMNTH 273

Query: 410 TYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEF 469
            Y A++H   KA +  +A+ L+  M  AG      S++ ++  YC K  +   + + +  
Sbjct: 274 VYNAMLHVCLKAGDAALAESLMTRMDAAGVPLDRFSFNTVIALYCRKGMQYEAMCVRERM 333

Query: 470 VSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEP 529
            ++G+  DV  + +LI   CK+ +V  A +L   M   G+  D V YT+L   Y RAG+ 
Sbjct: 334 ENQGVKADVVTWNSLIHGLCKERRVKEASQLLREMAMAGVAPDHVTYTTLVDGYCRAGDL 393

Query: 530 KACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI--LDLFWSHVVDRGLMSKHI 582
           +    +  +M    ++  +  Y +      +D ++  +++  + + +R + + H+
Sbjct: 394 EEAVKLRGEMEAMGMLPGVATYNAILRKLCEDGKMKEVNVLLNEMDERKVQADHV 448


>gi|125584236|gb|EAZ25167.1| hypothetical protein OsJ_08968 [Oryza sativa Japonica Group]
          Length = 566

 Score =  447 bits (1150), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 239/527 (45%), Positives = 329/527 (62%), Gaps = 47/527 (8%)

Query: 34  IASSLTSTAIHKVLLN---------LYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTM 84
           I S+LT    H  LL          L+    +PS + AFF+      P            
Sbjct: 16  IKSTLTQPHNHHHLLAASPSLLAAVLHRLSPLPSTALAFFRSLPPPHPLDASLALLRLLA 75

Query: 85  IHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLK 144
            H     +H  +A+++L  ++LR  LS+P +L +L+    DP    H+ SWL++  +   
Sbjct: 76  PH----PRHHPTARSLLRDLSLRHPLSSPLLLPSLLA---DP----HLPSWLLLLLSQSA 124

Query: 145 MTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYN 204
              D L+VFD MR   ++P  HA + LL +LAK R+T    KV+ +M + GV  N H+YN
Sbjct: 125 RPHDALRVFDHMRAREVVPDAHASSALLTALAKSRMTATARKVFDQMTRAGVAMNTHVYN 184

Query: 205 VLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMERE 264
            ++H C K+ D    E L+  M+   V  D F++NT+IALYC+KGM YEA+ V++RME +
Sbjct: 185 AMLHVCLKAGDAALAESLMTRMDAAGVPLDRFSFNTVIALYCRKGMQYEAMCVRERMENQ 244

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALR 324
           G+  D+VT+NSLIHG C+E R++EA                           +DLEEA++
Sbjct: 245 GVKADVVTWNSLIHGLCKERRVKEA---------------------------SDLEEAVK 277

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           LR  M A G+ PGV TYN+ILRKLC++G++++ N LLNEM+E+K+  D+VTCNTLINAYC
Sbjct: 278 LRGEMEAMGMLPGVATYNAILRKLCEDGKMKEVNVLLNEMDERKVQADHVTCNTLINAYC 337

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           K GD  SA+KVK RM+E+GL LDQFTYKAL+HGFCKAKE+D AKE LF M+ AGFSP+Y 
Sbjct: 338 KRGDMTSALKVKRRMMESGLQLDQFTYKALVHGFCKAKELDEAKEALFEMMGAGFSPNYS 397

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
             SW+VDG CNKNN  A+L + DE + RG   D +VYR+LIRR CKK  +D A  +FN M
Sbjct: 398 VLSWIVDGLCNKNNAVAVLAIPDELMKRGFPPDKAVYRSLIRRLCKKGFIDLAGNVFNEM 457

Query: 505 QGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIY 551
           QG G+  D ++Y +LA AY  AG+P A  DIL++M +++L IT +IY
Sbjct: 458 QGKGLEADCLVYATLACAYLTAGKPVAALDILNEMAKKQLYITPQIY 504



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 68/285 (23%), Positives = 116/285 (40%), Gaps = 31/285 (10%)

Query: 282 REGRMREARRLFRDIKG--ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVV 339
           +  R  +A R+F  ++     P+    + L+    ++     A ++ + M   GV     
Sbjct: 122 QSARPHDALRVFDHMRAREVVPDAHASSALLTALAKSRMTATARKVFDQMTRAGVAMNTH 181

Query: 340 TYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRM 399
            YN++L    K G    A  L+  M+   +  D  + NT+I  YC+ G    AM V+ RM
Sbjct: 182 VYNAMLHVCLKAGDAALAESLMTRMDAAGVPLDRFSFNTVIALYCRKGMQYEAMCVRERM 241

Query: 400 LEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNE 459
              G+  D  T+ +LIHG CK + +  A +L                            E
Sbjct: 242 ENQGVKADVVTWNSLIHGLCKERRVKEASDL----------------------------E 273

Query: 460 EALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
           EA+ KL  E  + G+   V+ Y A++R+ C+  K+     L N M    +  D V   +L
Sbjct: 274 EAV-KLRGEMEAMGMLPGVATYNAILRKLCEDGKMKEVNVLLNEMDERKVQADHVTCNTL 332

Query: 520 AYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
             AY + G+  +   +   M    L +    Y++    + K  E+
Sbjct: 333 INAYCKRGDMTSALKVKRRMMESGLQLDQFTYKALVHGFCKAKEL 377



 Score = 42.0 bits (97), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 32/142 (22%), Positives = 57/142 (40%), Gaps = 2/142 (1%)

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           LV  +   K   +  +   +M      P+    + +++ L        V  +  ++++ G
Sbjct: 367 LVHGFCKAKELDEAKEALFEMMGAGFSPNYSVLSWIVDGLCNKNNAVAVLAIPDELMKRG 426

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
              +  +Y  LI   CK   +D    +  EM+ K + AD   Y TL   Y   G    AL
Sbjct: 427 FPPDKAVYRSLIRRLCKKGFIDLAGNVFNEMQGKGLEADCLVYATLACAYLTAGKPVAAL 486

Query: 256 AVQDRMEREG--ISPDIVTYNS 275
            + + M ++   I+P I  Y S
Sbjct: 487 DILNEMAKKQLYITPQIYNYKS 508


>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Vitis vinifera]
          Length = 746

 Score =  290 bits (741), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 169/581 (29%), Positives = 294/581 (50%), Gaps = 29/581 (4%)

Query: 31  NPNIASSLTSTAI-HKVLLNL------------------------YNCCHIPSLSCAFFK 65
           +PN ++SL+ + +  KVLLNL                        Y C     L   F  
Sbjct: 60  DPNQSTSLSDSFLTEKVLLNLKQGKLNSLRNLLFRLDSVVVVDVLYKCRENLQLGQRFID 119

Query: 66  WAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDD 125
              S  PN+KHSLQS   MIHIL +++    AQ ++ ++  +  +S   ++ +LV  + +
Sbjct: 120 SITSNCPNFKHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVESLVLTYGN 179

Query: 126 PDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVW 185
              N  V   LV  Y   +  ++G + F  ++   L   ++AC  LL  L K    D+ W
Sbjct: 180 CGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAW 239

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
           ++Y+++V+ GV  N++  N++I+A CK+  ++  +  L +ME K V  D+ TYNTLI  Y
Sbjct: 240 EIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAY 299

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNH 303
           C++G+  EA  + D M  +G+ P + TYN++I+G C+ G+   A+ +  ++   G +P+ 
Sbjct: 300 CRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDT 359

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
            TY  L+   CR +++ +A R+ + M ++GV P +V++++++  L K G +  A +   +
Sbjct: 360 ATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRD 419

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
           M    +APDNV    LI  +C+ G  + A+KV++ MLE G +LD  TY  +++G CK K 
Sbjct: 420 MKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKM 479

Query: 424 MDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRA 483
           +  A EL   M + G  P + +++ L++GY    N    + L +  + R L  DV  Y  
Sbjct: 480 LSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNT 539

Query: 484 LIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRR 543
           LI  FCK  +++    L+N M    I  + + Y  L   Y   G       + D+M  + 
Sbjct: 540 LIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKG 599

Query: 544 LMITLKIYRSFSASYAKDNEIL--DLFWSHVVDRGLMSKHI 582
              T+    +    Y +    +  D F S+++ +G++   I
Sbjct: 600 FEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGI 640



 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 135/508 (26%), Positives = 236/508 (46%), Gaps = 29/508 (5%)

Query: 84  MIHILTKNKHFKSAQNML----EKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIF 139
           MI+ L KN+  ++ ++ L    EK    D ++  +++NA                     
Sbjct: 260 MINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINA--------------------- 298

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
           Y    + ++  ++ D M    L P +     ++N L K         V  +M+++G+  +
Sbjct: 299 YCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPD 358

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
              YN+L+  CC++ ++   E++  EM  + V  DL +++ LI L  K G   +AL    
Sbjct: 359 TATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFR 418

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRAN 317
            M+  G++PD V Y  LI GFCR G M EA ++  ++  +G   + VTY T+++G C+  
Sbjct: 419 DMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEK 478

Query: 318 DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCN 377
            L EA  L   M  +GV+P   T+ +++    K+G +  A  L   M ++ + PD VT N
Sbjct: 479 MLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYN 538

Query: 378 TLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA 437
           TLI+ +CK  +     ++ N M+   +  +  +Y  LI+G+C    +  A  L   M++ 
Sbjct: 539 TLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEK 598

Query: 438 GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYA 497
           GF  +  + + +V GYC   N     + L   + +G+  D   Y  LI  F K+E +D A
Sbjct: 599 GFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRA 658

Query: 498 QRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSAS 557
             L N M+ +G+L D + Y  +   + R G  +    I+  M  R +      Y S    
Sbjct: 659 FALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLING 718

Query: 558 YAKDNEILDLFWSH--VVDRGLMSKHIF 583
           +   N + + F  H  ++ RG +    F
Sbjct: 719 HVTQNNLKEAFRVHDEMLQRGFVPDDKF 746



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 97/391 (24%), Positives = 171/391 (43%), Gaps = 63/391 (16%)

Query: 41  TAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKN-------KH 93
           TA + +LL    CC   ++  A   + E         L S   +I +L+KN       K+
Sbjct: 359 TATYNILL--VECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKY 416

Query: 94  FK-------SAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANL--- 143
           F+       +  N++  I +  F     V++  +K+ D+      VL   V+ Y  +   
Sbjct: 417 FRDMKNAGLAPDNVIYTILIGGFCRN-GVMSEALKVRDEMLEQGCVLD--VVTYNTILNG 473

Query: 144 ----KMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
               KM  +  ++F +M    + P  +  T L+N  +KD   +    +++ M+Q  +  +
Sbjct: 474 LCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPD 533

Query: 200 IHLYNVLIHACCKSSDVDKVEKL----------------------LC------------- 224
           +  YN LI   CK S+++KV +L                       C             
Sbjct: 534 VVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWD 593

Query: 225 EMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREG 284
           EM  K   A + T NT++  YC+ G   +A      M  +GI PD +TYN+LI+GF +E 
Sbjct: 594 EMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEE 653

Query: 285 RMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYN 342
            M  A  L   ++  G  P+ +TY  +++G+ R   ++EA  +   M  +GV P   TY 
Sbjct: 654 NMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYT 713

Query: 343 SILRKLCKEGRIRDANRLLNEMNEKKIAPDN 373
           S++     +  +++A R+ +EM ++   PD+
Sbjct: 714 SLINGHVTQNNLKEAFRVHDEMLQRGFVPDD 744


>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
          Length = 850

 Score =  289 bits (740), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 169/581 (29%), Positives = 293/581 (50%), Gaps = 29/581 (4%)

Query: 31  NPNIASSLTSTAI-HKVLLNL------------------------YNCCHIPSLSCAFFK 65
           +PN ++SL+ + +  KVLLNL                        Y C     L   F  
Sbjct: 164 DPNQSTSLSDSFLTEKVLLNLKQGKLNSLRNLLFRLDSVVVVDVLYKCRENLQLGQRFID 223

Query: 66  WAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDD 125
              S  PN+KHSLQS   MIHIL +++    AQ ++ ++  +  +S   ++ +LV  + +
Sbjct: 224 SITSNCPNFKHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVESLVLTYGN 283

Query: 126 PDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVW 185
              N  V   LV  Y   +  ++G + F  ++   L   ++AC  LL  L K    D+ W
Sbjct: 284 CGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAW 343

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
           ++Y+++V+ GV  N++  N++I+A CK+  ++  +  L +ME K V  D+ TYNTLI  Y
Sbjct: 344 EIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAY 403

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNH 303
           C++G+  EA  + D M  +G+ P + TYN++I+G C+ G+   A+ +  ++   G +P+ 
Sbjct: 404 CRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDT 463

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
            TY  L+   CR +++ +A R+ + M ++GV P +V++++++  L K G +  A +   +
Sbjct: 464 ATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRD 523

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
           M    +APDNV    LI  +C+ G  + A+KV++ MLE G  LD  TY  +++G CK K 
Sbjct: 524 MKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKM 583

Query: 424 MDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRA 483
           +  A EL   M + G  P + +++ L++GY    N    + L +  + R L  DV  Y  
Sbjct: 584 LSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNT 643

Query: 484 LIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRR 543
           LI  FCK  +++    L+N M    I  + + Y  L   Y   G       + D+M  + 
Sbjct: 644 LIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKG 703

Query: 544 LMITLKIYRSFSASYAKDNEIL--DLFWSHVVDRGLMSKHI 582
              T+    +    Y +    +  D F S+++ +G++   I
Sbjct: 704 FEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGI 744



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 135/508 (26%), Positives = 236/508 (46%), Gaps = 29/508 (5%)

Query: 84  MIHILTKNKHFKSAQNML----EKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIF 139
           MI+ L KN+  ++ ++ L    EK    D ++  +++NA                     
Sbjct: 364 MINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINA--------------------- 402

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
           Y    + ++  ++ D M    L P +     ++N L K         V  +M+++G+  +
Sbjct: 403 YCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPD 462

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
              YN+L+  CC++ ++   E++  EM  + V  DL +++ LI L  K G   +AL    
Sbjct: 463 TATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFR 522

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRAN 317
            M+  G++PD V Y  LI GFCR G M EA ++  ++  +G   + VTY T+++G C+  
Sbjct: 523 DMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEK 582

Query: 318 DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCN 377
            L EA  L   M  +GV+P   T+ +++    K+G +  A  L   M ++ + PD VT N
Sbjct: 583 MLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYN 642

Query: 378 TLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA 437
           TLI+ +CK  +     ++ N M+   +  +  +Y  LI+G+C    +  A  L   M++ 
Sbjct: 643 TLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEK 702

Query: 438 GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYA 497
           GF  +  + + +V GYC   N     + L   + +G+  D   Y  LI  F K+E +D A
Sbjct: 703 GFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRA 762

Query: 498 QRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSAS 557
             L N M+ +G+L D + Y  +   + R G  +    I+  M  R +      Y S    
Sbjct: 763 FALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLING 822

Query: 558 YAKDNEILDLFWSH--VVDRGLMSKHIF 583
           +   N + + F  H  ++ RG +    F
Sbjct: 823 HVTQNNLKEAFRVHDEMLQRGFVPDDKF 850



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 96/391 (24%), Positives = 169/391 (43%), Gaps = 63/391 (16%)

Query: 41  TAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKN-------KH 93
           TA + +LL    CC   ++  A   + E         L S   +I +L+KN       K+
Sbjct: 463 TATYNILL--VECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKY 520

Query: 94  FK-------SAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANL--- 143
           F+       +  N++  I +  F     V++  +K+ D+       L   V+ Y  +   
Sbjct: 521 FRDMKNAGLAPDNVIYTILIGGFCRN-GVMSEALKVRDEMLEQGCXLD--VVTYNTILNG 577

Query: 144 ----KMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
               KM  +  ++F +M    + P  +  T L+N   KD   +    +++ M+Q  +  +
Sbjct: 578 LCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPD 637

Query: 200 IHLYNVLIHACCKSSDVDKVEKL----------------------LC------------- 224
           +  YN LI   CK S+++KV +L                       C             
Sbjct: 638 VVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWD 697

Query: 225 EMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREG 284
           EM  K   A + T NT++  YC+ G   +A      M  +GI PD +TYN+LI+GF +E 
Sbjct: 698 EMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEE 757

Query: 285 RMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYN 342
            M  A  L   ++  G  P+ +TY  +++G+ R   ++EA  +   M  +GV P   TY 
Sbjct: 758 NMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYT 817

Query: 343 SILRKLCKEGRIRDANRLLNEMNEKKIAPDN 373
           S++     +  +++A R+ +EM ++   PD+
Sbjct: 818 SLINGHVTQNNLKEAFRVHDEMLQRGFVPDD 848


>gi|356499079|ref|XP_003518371.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Glycine max]
          Length = 615

 Score =  288 bits (736), Expect = 8e-75,   Method: Compositional matrix adjust.
 Identities = 164/503 (32%), Positives = 268/503 (53%), Gaps = 11/503 (2%)

Query: 34  IASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKH 93
           I  SLT   + K L+ L   C  PS   +FF    S  P ++H+L S+ TM+H L  ++ 
Sbjct: 77  ILPSLTPRHVSK-LITLNPLCLPPSSLLSFFNHLASR-PPFRHTLHSYCTMLHFLCLHRM 134

Query: 94  FKSAQNMLEKIALRDFLSTPS-----VLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQD 148
              A +++  +  R   ++ S     +L  + + H        V   L+  Y +   T D
Sbjct: 135 LPQAHSLVSFLVSRKGTNSASTLFSSILRTMPRHHHHHHSVGLVFDALISAYVDSGFTPD 194

Query: 149 GLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDM--VWKVYKKMVQLGVVANIHLYNVL 206
            +Q F  +  +     +  C  LL  + + R  ++   W +Y +++  G    I+ +NVL
Sbjct: 195 AVQCFRLVTKNKFPVPIRGCENLLRRVVRLRPVEIERSWALYLEVLDSGYPPKIYFFNVL 254

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           +H  CK+ DV     +  E+  + +R  + ++NTLI+  CK G   E   ++  ME EG+
Sbjct: 255 MHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSGDVEEGFRLKGVMESEGV 314

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
            PD+ T+++LI+G C+EGR+ E   LF ++  +G  PN VT+TTLIDG C+   ++ AL+
Sbjct: 315 CPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQCKGGKVDLALK 374

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
             ++M A+GV P +VTYN+++  LCK G +++A RL+NEM    + PD +T  TLI+  C
Sbjct: 375 NFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFTTLIDGCC 434

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           K GD  SA+++K RM+E G+ LD   + ALI G C+   +  A  +L  ML AGF P   
Sbjct: 435 KDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSAGFKPDDP 494

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
           +Y+ ++D +C K + +   KLL E  S G    V  Y AL+   CK+ ++  A+ L + M
Sbjct: 495 TYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMKNAKMLLDAM 554

Query: 505 QGNGILGDSVIYTSLAYAYWRAG 527
              G+  + + Y  L   + + G
Sbjct: 555 LNVGVAPNDITYNILLDGHSKHG 577



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 96/277 (34%), Positives = 153/277 (55%), Gaps = 2/277 (0%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEA 322
           G  P I  +N L+HGFC+ G +  AR +F +I  +G  P  V++ TLI G C++ D+EE 
Sbjct: 243 GYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSGDVEEG 302

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            RL+ VM ++GV P V T+++++  LCKEGR+ + + L +EM  + + P+ VT  TLI+ 
Sbjct: 303 FRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDG 362

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
            CK G    A+K    ML  G+  D  TY ALI+G CK  ++  A+ L+  M  +G  P 
Sbjct: 363 QCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPD 422

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +++ L+DG C   + E+ L++    V  G+ +D   + ALI   C++ +V  A R+  
Sbjct: 423 KITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLT 482

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
            M   G   D   YT +   + + G+ K    +L +M
Sbjct: 483 DMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEM 519



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 95/271 (35%), Positives = 155/271 (57%), Gaps = 5/271 (1%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           +G  +FD+M    L+P+    T L++   K    D+  K ++ M+  GV  ++  YN LI
Sbjct: 336 EGSLLFDEMCGRGLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALI 395

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           +  CK  D+ +  +L+ EM    ++ D  T+ TLI   CK G    AL ++ RM  EGI 
Sbjct: 396 NGLCKVGDLKEARRLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIE 455

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
            D V + +LI G CREGR+ +A R+  D+   G  P+  TYT +ID +C+  D++   +L
Sbjct: 456 LDDVAFTALISGLCREGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKL 515

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
            + M + G  PGVVTYN+++  LCK+G++++A  LL+ M    +AP+++T N L++ + K
Sbjct: 516 LKEMQSDGHVPGVVTYNALMNGLCKQGQMKNAKMLLDAMLNVGVAPNDITYNILLDGHSK 575

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIH 416
            G   S++ V     E GL+ D  +Y AL++
Sbjct: 576 HG---SSVDVDIFNSEKGLVTDYASYTALVN 603



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 77/276 (27%), Positives = 131/276 (47%), Gaps = 18/276 (6%)

Query: 271 VTYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMA 330
           + +++LI  +   G   +A + FR +   T N   +   I G C  N L   +RLR V  
Sbjct: 177 LVFDALISAYVDSGFTPDAVQCFRLV---TKNK--FPVPIRG-CE-NLLRRVVRLRPVEI 229

Query: 331 AK-----------GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTL 379
            +           G  P +  +N ++   CK G + +A  + +E+ ++ + P  V+ NTL
Sbjct: 230 ERSWALYLEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTL 289

Query: 380 INAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGF 439
           I+  CK GD     ++K  M   G+  D FT+ ALI+G CK   +D    L   M   G 
Sbjct: 290 ISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGL 349

Query: 440 SPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQR 499
            P+  +++ L+DG C     +  LK     +++G+  D+  Y ALI   CK   +  A+R
Sbjct: 350 VPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARR 409

Query: 500 LFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDI 535
           L N M  +G+  D + +T+L     + G+ ++  +I
Sbjct: 410 LVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEI 445


>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680 [Vitis vinifera]
 gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
          Length = 592

 Score =  276 bits (707), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 154/474 (32%), Positives = 257/474 (54%), Gaps = 6/474 (1%)

Query: 57  PSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFL-STPSV 115
           PSL  +FFKW  S   +++ S+ S+ TM H L  +K    AQ++L+ +  R    S  SV
Sbjct: 84  PSL-LSFFKWL-STQHHFRLSIHSYCTMTHFLCTHKMLSEAQSLLQFVVSRKGKNSASSV 141

Query: 116 LNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSL 175
             ++++       N  V S L+  Y +     D +Q F  +R HNL    H+C  L + L
Sbjct: 142 FTSVLEARGTHQSNL-VFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRL 200

Query: 176 AKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADL 235
            K  LT   W  Y++++  G   ++  +NVL+H  CK   +++ + L  E+  + +R  +
Sbjct: 201 MKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTV 260

Query: 236 FTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD 295
            ++NTLI  YCK G   +   ++  M    + PD+ TY+ LI+G C+EG++ +A +LF +
Sbjct: 261 VSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLE 320

Query: 296 I--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGR 353
           +  +G  PN VT+TTLI+G+C     +  + + + M  KGV P V+TYN+++  LCK G 
Sbjct: 321 MCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGD 380

Query: 354 IRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKA 413
           +R+A +L+ EM ++ + PD  T   LI+  CK GD  SA++++  M++ G+ LD   + A
Sbjct: 381 LREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTA 440

Query: 414 LIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
           LI GFC+  ++  A+  L  ML+AG  P   +Y+ ++ G+C K + +   KLL E    G
Sbjct: 441 LISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDG 500

Query: 474 LCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
               V  Y  L+   CK+ ++  A  L + M   G++ D + Y  L   + + G
Sbjct: 501 HVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLEGHCKHG 554



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 115/347 (33%), Positives = 188/347 (54%), Gaps = 8/347 (2%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           +F ++    L P + +   L+N   K    D  +++ + M++  V  ++  Y+VLI+  C
Sbjct: 247 LFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLC 306

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           K   +D   KL  EM  + +  +  T+ TLI  +C  G     + +  +M R+G+ PD++
Sbjct: 307 KEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVI 366

Query: 272 TYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           TYN+LI+G C+ G +REA++L  ++  +G  P+  TYT LIDG C+  DLE AL +R+ M
Sbjct: 367 TYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEM 426

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
             +G+    V + +++   C+EG++ +A R L EM E  I PD+ T   +I+ +CK GD 
Sbjct: 427 VKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDV 486

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
            +  K+   M   G +    TY  L++G CK  +M  A  LL  ML+ G  P   +Y+ L
Sbjct: 487 KTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNIL 546

Query: 450 VDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI---RRFCKKEK 493
           ++G+C   N E   KL  E   +GL  D   Y +LI   R+ CK+ +
Sbjct: 547 LEGHCKHGNREDFDKLQSE---KGLVQDYGSYTSLIGDLRKTCKERQ 590



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 98/277 (35%), Positives = 160/277 (57%), Gaps = 2/277 (0%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEA 322
           G  PD+  +N L+H  C+E ++ EA+ LF +I  +G  P  V++ TLI+GYC++ +L++ 
Sbjct: 220 GYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQG 279

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            RL+  M    V+P V TY+ ++  LCKEG++ DAN+L  EM ++ + P++VT  TLIN 
Sbjct: 280 FRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLING 339

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +C  G     M++  +ML  G+  D  TY  LI+G CK  ++  AK+L+  M   G  P 
Sbjct: 340 HCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPD 399

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ L+DG C + + E+ L++  E V  G+ +D   + ALI  FC++ +V  A+R   
Sbjct: 400 KFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLR 459

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
            M   GI  D   YT + + + + G+ K    +L +M
Sbjct: 460 EMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEM 496



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 88/369 (23%), Positives = 171/369 (46%), Gaps = 15/369 (4%)

Query: 201 HLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDR 260
           H + + IH+ C  +      K+L E +           + L  +  +KG +  +      
Sbjct: 97  HHFRLSIHSYCTMTHFLCTHKMLSEAQ-----------SLLQFVVSRKGKNSASSVFTSV 145

Query: 261 MEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKG---ATPNHVTYTTLIDGYCRAN 317
           +E  G     + ++ L++ +   G   +A + FR ++      P H +   L D   + N
Sbjct: 146 LEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFH-SCGYLFDRLMKLN 204

Query: 318 DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCN 377
               A    E +   G  P V  +N ++ +LCKE +I +A  L  E+ ++ + P  V+ N
Sbjct: 205 LTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFN 264

Query: 378 TLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA 437
           TLIN YCK G+     ++K  M+E  +  D FTY  LI+G CK  ++D A +L   M D 
Sbjct: 265 TLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDR 324

Query: 438 GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYA 497
           G  P+  +++ L++G+C     +  +++  + + +G+  DV  Y  LI   CK   +  A
Sbjct: 325 GLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREA 384

Query: 498 QRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSAS 557
           ++L   M   G+  D   YT L     + G+ ++  +I  +M +  + +    + +  + 
Sbjct: 385 KKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISG 444

Query: 558 YAKDNEILD 566
           + ++ ++++
Sbjct: 445 FCREGQVIE 453



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 73/263 (27%), Positives = 128/263 (48%), Gaps = 29/263 (11%)

Query: 98  QNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMR 157
           Q ML K    D ++  +++N L K+ D  +    V+          +MTQ GL+      
Sbjct: 354 QQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVI----------EMTQRGLK------ 397

Query: 158 VHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVD 217
                P     T+L++   K+   +   ++ K+MV+ G+  +   +  LI   C+   V 
Sbjct: 398 -----PDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVI 452

Query: 218 KVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLI 277
           + E+ L EM    ++ D  TY  +I  +CKKG       +   M+ +G  P +VTYN L+
Sbjct: 453 EAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLL 512

Query: 278 HGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVY 335
           +G C++G+M+ A  L   +   G  P+ +TY  L++G+C+  + E+  +L+   + KG+ 
Sbjct: 513 NGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLEGHCKHGNREDFDKLQ---SEKGLV 569

Query: 336 PGVVTYNSI---LRKLCKEGRIR 355
               +Y S+   LRK CKE + R
Sbjct: 570 QDYGSYTSLIGDLRKTCKERQKR 592


>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
          Length = 559

 Score =  276 bits (706), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 155/477 (32%), Positives = 257/477 (53%), Gaps = 9/477 (1%)

Query: 57  PSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFL-STPSV 115
           PSL  +FFKW  S   +++ S+ S+ TM H L  +K    AQ++L+ +  R    S  SV
Sbjct: 84  PSL-LSFFKWL-STQHHFRLSIHSYCTMTHFLCTHKMLSEAQSLLQFVVSRKGKNSASSV 141

Query: 116 LNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSL 175
             ++++       N  V S L+  Y +     D +Q F  +R HNL    H+C  L + L
Sbjct: 142 FTSVLEARGTHQSNL-VFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRL 200

Query: 176 AKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADL 235
            K  LT   W  Y++++  G   ++  +NVL+H  CK   +++ + L  E+  + +R  +
Sbjct: 201 MKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTV 260

Query: 236 FTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD 295
            ++NTLI  YCK G   +   ++  M    + PD+ TY+ LI+G C+EG++ +A +LF +
Sbjct: 261 VSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLE 320

Query: 296 I--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGR 353
           +  +G  PN VT+TTLI+G+C     +  + + + M  KGV P V+TYN+++  LCK G 
Sbjct: 321 MCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGD 380

Query: 354 IRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKA 413
           +R+A +L+ EM ++ + PD  T   LI+  CK GD  SA++++  M++ G+ LD   + A
Sbjct: 381 LREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTA 440

Query: 414 LIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
           LI GFC+  ++  A+  L  ML+AG  P   +Y+ ++ G+C K + +   KLL E    G
Sbjct: 441 LISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDG 500

Query: 474 LCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL---AYAYWRAG 527
               V  Y  L+   CK+ ++  A  L + M   G++ D + Y  L       W+ G
Sbjct: 501 HVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLERTLQAWKQG 557



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 98/277 (35%), Positives = 160/277 (57%), Gaps = 2/277 (0%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEA 322
           G  PD+  +N L+H  C+E ++ EA+ LF +I  +G  P  V++ TLI+GYC++ +L++ 
Sbjct: 220 GYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQG 279

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            RL+  M    V+P V TY+ ++  LCKEG++ DAN+L  EM ++ + P++VT  TLIN 
Sbjct: 280 FRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLING 339

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +C  G     M++  +ML  G+  D  TY  LI+G CK  ++  AK+L+  M   G  P 
Sbjct: 340 HCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPD 399

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ L+DG C + + E+ L++  E V  G+ +D   + ALI  FC++ +V  A+R   
Sbjct: 400 KFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLR 459

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
            M   GI  D   YT + + + + G+ K    +L +M
Sbjct: 460 EMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEM 496



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 88/369 (23%), Positives = 171/369 (46%), Gaps = 15/369 (4%)

Query: 201 HLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDR 260
           H + + IH+ C  +      K+L E +           + L  +  +KG +  +      
Sbjct: 97  HHFRLSIHSYCTMTHFLCTHKMLSEAQ-----------SLLQFVVSRKGKNSASSVFTSV 145

Query: 261 MEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKG---ATPNHVTYTTLIDGYCRAN 317
           +E  G     + ++ L++ +   G   +A + FR ++      P H +   L D   + N
Sbjct: 146 LEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFH-SCGYLFDRLMKLN 204

Query: 318 DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCN 377
               A    E +   G  P V  +N ++ +LCKE +I +A  L  E+ ++ + P  V+ N
Sbjct: 205 LTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFN 264

Query: 378 TLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA 437
           TLIN YCK G+     ++K  M+E  +  D FTY  LI+G CK  ++D A +L   M D 
Sbjct: 265 TLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDR 324

Query: 438 GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYA 497
           G  P+  +++ L++G+C     +  +++  + + +G+  DV  Y  LI   CK   +  A
Sbjct: 325 GLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREA 384

Query: 498 QRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSAS 557
           ++L   M   G+  D   YT L     + G+ ++  +I  +M +  + +    + +  + 
Sbjct: 385 KKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISG 444

Query: 558 YAKDNEILD 566
           + ++ ++++
Sbjct: 445 FCREGQVIE 453


>gi|357491947|ref|XP_003616261.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355517596|gb|AES99219.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 811

 Score =  276 bits (706), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 162/508 (31%), Positives = 273/508 (53%), Gaps = 12/508 (2%)

Query: 30  LNPNIASSLTSTAIHKV--LLNLYNCCHIPSLSC-AFFKWAESAVPNYKHSLQSHWTMIH 86
           LNP +   L S   H +  L+NL N   +P LS  +FF +  S  P ++H+L ++ TM H
Sbjct: 50  LNPTLKRILPSLTSHHITNLINL-NPLSLPPLSLFSFFNYLASRPP-FRHTLHNYSTMAH 107

Query: 87  ILTKNKHFKSAQNM----LEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYAN 142
            L+ +       ++    + K+      S  S L   V  H   + +  V   L+I Y +
Sbjct: 108 FLSSHNLLSQTHSLFLFIISKMGHHSSTSLISSLIQTVPTHHRHNHSVLVFDALIIAYTD 167

Query: 143 LKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAK-DRLTDMVWKVYKKMVQLGVVANIH 201
            +  +D +Q    ++ +N    +  C  LL  + K ++     W+ Y +++  G   N++
Sbjct: 168 SEFIEDAIQCLRLVKKNNFSIPVCGCDYLLRRVMKLNQQPGHCWEFYLEVLDYGYPPNVY 227

Query: 202 LYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRM 261
           L+N+L+H  CK  DV     +  E+  + +R  + ++NTLI+ YC+     E   ++  M
Sbjct: 228 LFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVEEGFVLKSVM 287

Query: 262 EREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDL 319
           E E ISPD+ TY++LI+G C+E R+ EA  LF ++   G  PN VT+TTLIDG C+   +
Sbjct: 288 ESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQCKHGKI 347

Query: 320 EEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTL 379
           + ALR  E+M  +G+ P ++TYN+++  LC++G +++A +LLNEM      PD +T  TL
Sbjct: 348 DLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKITFTTL 407

Query: 380 INAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGF 439
           ++  CK GD  SA+++K+RM+E G+ LD   + ALI G C+   +  A+ +L  ML AG 
Sbjct: 408 MDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKDMLSAGH 467

Query: 440 SPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQR 499
            P   +Y+ ++D +C K + +   KLL E    G    V  Y AL+  FCK+ ++  A+ 
Sbjct: 468 KPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQGQMKNAKM 527

Query: 500 LFNLMQGNGILGDSVIYTSLAYAYWRAG 527
           L + M    ++ + + +  L   + + G
Sbjct: 528 LLHAMLNMEVVPNDITFNILLDGHCKHG 555



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 98/302 (32%), Positives = 167/302 (55%), Gaps = 2/302 (0%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEA 322
           G  P++  +N L+HGFC+ G +  AR +F +I  +G  P+ V++ TLI GYCR+ ++EE 
Sbjct: 221 GYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVEEG 280

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
             L+ VM ++ + P V TY++++  LCKE R+ +AN L +EM E  + P+ VT  TLI+ 
Sbjct: 281 FVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDG 340

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
            CK G    A++    M + G+  D  TY ALI+G C+  ++  A++LL  M+  GF P 
Sbjct: 341 QCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPD 400

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +++ L+DG C   + ++ L++ D  V  G+ +D   + ALI   C+  +V  A+R+  
Sbjct: 401 KITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLK 460

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDN 562
            M   G   D   YT +   + + G+ K  + +L +M R   +  +  Y +    + K  
Sbjct: 461 DMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQG 520

Query: 563 EI 564
           ++
Sbjct: 521 QM 522



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 109/366 (29%), Positives = 192/366 (52%), Gaps = 26/366 (7%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           +FD+M    L+P+    T L++   K    D+  + ++ M   G+  ++  YN LI+  C
Sbjct: 318 LFDEMCEMGLVPNGVTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLC 377

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           +  D+ +  KLL EM     + D  T+ TL+   CK G    AL ++DRM  EGI  D V
Sbjct: 378 RDGDLKEARKLLNEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDV 437

Query: 272 TYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
            + +LI G CR+GR+R+A R+ +D+   G  P+  TYT +ID +C+  D++   +L + M
Sbjct: 438 AFTALISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEM 497

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
              G  PGVVTYN+++   CK+G++++A  LL+ M   ++ P+++T N L++ +CK G +
Sbjct: 498 QRDGRVPGVVTYNALMNGFCKQGQMKNAKMLLHAMLNMEVVPNDITFNILLDGHCKHGSS 557

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
               K+ N   E GL+ D  +Y AL++     + + I+K+ L  +L+    P++    + 
Sbjct: 558 VD-FKIFNG--EKGLVSDYASYTALVN-----ESIKISKDQLKSVLEC---PTHIGIQYR 606

Query: 450 VD-GYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRF------CKKE------KVDY 496
            +   C+        ++  EF+  G+ + V +     RR+      C+K       ++ Y
Sbjct: 607 QNTDMCSCIQSLQFSQIFTEFLRVGVVLSVCISIPYERRYFGCYSQCQKPELSDRLQIPY 666

Query: 497 AQRLFN 502
            +R F 
Sbjct: 667 ERRYFG 672



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 113/234 (48%)

Query: 333 GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
           G  P V  +N ++   CK G + +A  + +E++ + + P  V+ NTLI+ YC+  +    
Sbjct: 221 GYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVEEG 280

Query: 393 MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
             +K+ M    +  D FTY ALI+G CK   ++ A  L   M + G  P+  +++ L+DG
Sbjct: 281 FVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDG 340

Query: 453 YCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGD 512
            C     +  L+  +    RG+  D+  Y ALI   C+   +  A++L N M GNG   D
Sbjct: 341 QCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPD 400

Query: 513 SVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
            + +T+L     + G+  +  +I D M    + +    + +  +   +D  + D
Sbjct: 401 KITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRD 454



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/167 (26%), Positives = 76/167 (45%)

Query: 398 RMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKN 457
            +L+ G   + + +  L+HGFCK  ++  A+ +   +   G  PS  S++ L+ GYC   
Sbjct: 216 EVLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSK 275

Query: 458 NEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYT 517
           N E    L     S  +  DV  Y ALI   CK+ +V+ A  LF+ M   G++ + V +T
Sbjct: 276 NVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFT 335

Query: 518 SLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
           +L     + G+        + M  R +   L  Y +      +D ++
Sbjct: 336 TLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDL 382


>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  273 bits (698), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 151/494 (30%), Positives = 250/494 (50%), Gaps = 5/494 (1%)

Query: 69  SAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDG 128
           S++P ++H+ QS+  M + L+ ++ F+  Q+++  +  R    + + + A +        
Sbjct: 92  SSIPTFRHTSQSYCAMANFLSAHQMFQECQSIIRFLVSRKGKDSAASVFAAILDTAGTRC 151

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           ++ V   L+I Y +     D +Q F  +R  N     H C  LL+ +        +W  Y
Sbjct: 152 SNFVFDALMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMINSNSPVTIWTFY 211

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
            ++++ G    +  YN+LI+  CK   +   + +  E+  + +R    ++NTLI   CK 
Sbjct: 212 SEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKS 271

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTY 306
               E   ++  ME   I PD+ TY+ LIHG C+EGR+  A +LF ++  +G  PN +T+
Sbjct: 272 RNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITF 331

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
           T LIDG CR+  ++ A+     M   GV P +V YN++L  LCK G +  A +L++EM  
Sbjct: 332 TALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRM 391

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
             + PD +T  TLI+ YCK GD  SAM+++  M E G++LD   + ALI GFC+   +  
Sbjct: 392 VGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRD 451

Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
           A+  L  M++AG  P   +Y+ ++DGYC K N +   KLL E    G    V  Y  L+ 
Sbjct: 452 AERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMN 511

Query: 487 RFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMI 546
             CK+ ++  A  L   M   G+  D + Y  L   + + G+     D+L     + L++
Sbjct: 512 GLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGK---AEDLLKLRNEKGLIV 568

Query: 547 TLKIYRSFSASYAK 560
               Y S  + Y K
Sbjct: 569 DYAYYTSLVSEYNK 582



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 84/326 (25%), Positives = 154/326 (47%), Gaps = 4/326 (1%)

Query: 244 LYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGAT--- 300
           L  +KG    A      ++  G       +++L+  +   G + +A + FR ++ +    
Sbjct: 127 LVSRKGKDSAASVFAAILDTAGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVRNSNFQI 186

Query: 301 PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRL 360
           P H     L+D    +N           +   G  P V  YN ++ K CKEG IRDA  +
Sbjct: 187 PFHGC-GYLLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLI 245

Query: 361 LNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCK 420
            NE+ ++ + P  V+ NTLIN  CK  +     ++K  M E  +  D FTY  LIHG CK
Sbjct: 246 FNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCK 305

Query: 421 AKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSV 480
              +D+A++L   M   G  P+  +++ L+DG C     ++ +    + ++ G+  D+ +
Sbjct: 306 EGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVM 365

Query: 481 YRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMY 540
           Y  L+   CK   V+ A++L + M+  G+  D + YT+L   Y + G+ ++  +I   M 
Sbjct: 366 YNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMN 425

Query: 541 RRRLMITLKIYRSFSASYAKDNEILD 566
              +++    + +  + + +D  + D
Sbjct: 426 EEGVVLDNVAFTALISGFCRDGRVRD 451


>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  269 bits (687), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 150/494 (30%), Positives = 249/494 (50%), Gaps = 5/494 (1%)

Query: 69  SAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDG 128
           S++P ++H+ QS+  M + L+ ++ F+  Q+++  +  R    + + + A +        
Sbjct: 92  SSIPTFRHTSQSYCAMANFLSAHQMFQECQSIIRFLVSRKGKDSAASVFAAILDTAGTRC 151

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           ++ V   L+I Y +     D +Q F  +R  N     H C  LL+ +        +W  Y
Sbjct: 152 SNFVFDALMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMINSNSPVTIWTFY 211

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
            ++++ G    +  YN+LI+  CK   +   + +  E+  + +R    ++NTLI   CK 
Sbjct: 212 SEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKS 271

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTY 306
               E   ++  ME   I PD+ TY+ LIHG C+EGR+  A +LF ++  +G  PN +T+
Sbjct: 272 RNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITF 331

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
           T LIDG  R+  ++ A+     M   GV P +V YN++L  LCK G +  A +L++EM  
Sbjct: 332 TALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKM 391

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
             + PD +T  TLI+ YCK GD  SAM+++  M E G++LD   + ALI GFC+   +  
Sbjct: 392 VGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRD 451

Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
           A+  L  M++AG  P   +Y+ ++DGYC K N +   KLL E    G    V  Y  L+ 
Sbjct: 452 AERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMN 511

Query: 487 RFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMI 546
             CK+ ++  A  L   M   G+  D + Y  L   + + G+     D+L     + L++
Sbjct: 512 GLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGK---AEDLLKLRNEKGLIV 568

Query: 547 TLKIYRSFSASYAK 560
               Y S  + Y K
Sbjct: 569 DYAYYTSLVSEYNK 582



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 83/326 (25%), Positives = 153/326 (46%), Gaps = 4/326 (1%)

Query: 244 LYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGAT--- 300
           L  +KG    A      ++  G       +++L+  +   G + +A + FR ++ +    
Sbjct: 127 LVSRKGKDSAASVFAAILDTAGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVRNSNFQI 186

Query: 301 PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRL 360
           P H     L+D    +N           +   G  P V  YN ++ K CKEG IRDA  +
Sbjct: 187 PFHGC-GYLLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLI 245

Query: 361 LNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCK 420
            NE+ ++ + P  V+ NTLIN  CK  +     ++K  M E  +  D FTY  LIHG CK
Sbjct: 246 FNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCK 305

Query: 421 AKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSV 480
              +D+A++L   M   G  P+  +++ L+DG       ++ +    + ++ G+  D+ +
Sbjct: 306 EGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVM 365

Query: 481 YRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMY 540
           Y  L+   CK   V+ A++L + M+  G+  D + YT+L   Y + G+ ++  +I   M 
Sbjct: 366 YNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMN 425

Query: 541 RRRLMITLKIYRSFSASYAKDNEILD 566
              +++    + +  + + +D  + D
Sbjct: 426 EEGVVLDNVAFTALISGFCRDGRVRD 451


>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 716

 Score =  265 bits (678), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 164/549 (29%), Positives = 274/549 (49%), Gaps = 18/549 (3%)

Query: 36  SSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFK 95
           S+LT T I ++L     C + P L     +   S  PN   S+ +  T+IH L ++K   
Sbjct: 64  STLTLTLIPQLL---QKCQNYPLLLPNLIQTIASTSPN--PSIIA--TLIHFLVQSKKLP 116

Query: 96  SAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSH---VLSWLVIFYANLKMTQDGLQV 152
            AQ++L +I  +  +S   V+++L+        ++    V   L+  Y   +  ++G + 
Sbjct: 117 EAQSLLLRIIRKSGVSHVEVIDSLISTSSSNLNSNQNVVVFDLLIRTYVQARKLREGSEA 176

Query: 153 FDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCK 212
           F  +R       ++AC  LL ++ K    D+ WKVY+  V+ G + N++  N++++A CK
Sbjct: 177 FQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYEDFVKSGNIVNVYTLNIMVNALCK 236

Query: 213 SSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVT 272
              +D V   L EME K V ADL TYNTL+  YC++G+  EA  + D M  +G+ P + T
Sbjct: 237 DGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFT 296

Query: 273 YNSLIHGFCREGRMREARRLFRDIKGAT--PNHVTYTTLIDGYCRANDLEEALRLREVMA 330
           YN+LI+G C+EG    A+R+  ++ G    PN  T+  ++   CR  D+ EA R+   M 
Sbjct: 297 YNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEML 356

Query: 331 AKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTA 390
            +GV P +++++SI+    + G +  A     +M    + PD V    LIN YC+  D +
Sbjct: 357 QRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVS 416

Query: 391 SAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLV 450
            A+K++N M+E G ++D  TY  L++G C+ K +D A EL   M++ G  P + + + L+
Sbjct: 417 GALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLI 476

Query: 451 DGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGIL 510
            GYC   N    L L +    R L  DV  Y  L+  FCK  +++ A+ L+  M    I 
Sbjct: 477 HGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIF 536

Query: 511 GDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASY------AKDNEI 564
              + ++ L   +   G       + D+M  + +  TL    +    Y      +K N+ 
Sbjct: 537 PSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDF 596

Query: 565 LDLFWSHVV 573
           L+   S  V
Sbjct: 597 LNTMISEGV 605



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 107/364 (29%), Positives = 193/364 (53%), Gaps = 2/364 (0%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           +VF++M    ++P L + + ++   +++         ++KM  +G+V +  +Y +LI+  
Sbjct: 350 RVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGY 409

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           C++ DV    K+  EM  +    D+ TYNTL+   C+  M  +A  +   M   G+ PD 
Sbjct: 410 CRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDF 469

Query: 271 VTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
            T  +LIHG+C++G M +A  LF    ++   P+ VTY TL+DG+C+  ++E+A  L   
Sbjct: 470 YTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYD 529

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M ++ ++P  ++++ ++   C  G + +A RL +EM EK I P  VTCNT+I  Y + G+
Sbjct: 530 MISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGN 589

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
            + A    N M+  G+  D  TY  LI+ F K +  D A  L+  M + G  P+  +Y+ 
Sbjct: 590 LSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNA 649

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG 508
           ++ G+      +    +L + + +G+  D S Y +LI  +  K+ +  A R+ + M   G
Sbjct: 650 ILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQRG 709

Query: 509 ILGD 512
            + D
Sbjct: 710 FVPD 713



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 121/452 (26%), Positives = 215/452 (47%), Gaps = 4/452 (0%)

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           LV  Y    +  +   + D M    L P L     L+N L K+   +   +V  +M+ +G
Sbjct: 265 LVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVG 324

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
           +  N   +N ++   C+  DV + E++  EM  + V  DL ++++++ ++ + G    AL
Sbjct: 325 LCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRAL 384

Query: 256 AVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGY 313
           A  ++M+  G+ PD V Y  LI+G+CR   +  A ++  ++  +G   + VTY TL++G 
Sbjct: 385 AYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGL 444

Query: 314 CRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDN 373
           CR   L++A  L + M  +GV+P   T  +++   CK+G +  A  L   M  + + PD 
Sbjct: 445 CRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDV 504

Query: 374 VTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFG 433
           VT NTL++ +CK+G+   A ++   M+   +     ++  LI+GFC    +  A  L   
Sbjct: 505 VTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDE 564

Query: 434 MLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEK 493
           M + G  P+  + + ++ GY    N       L+  +S G+  D   Y  LI  F K+E 
Sbjct: 565 MKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEEN 624

Query: 494 VDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRS 553
            D A  L N M+  G+L + V Y ++   + R G  +    +L  M  + +      Y S
Sbjct: 625 FDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTS 684

Query: 554 FSASYAKDNEILDLFWSH--VVDRGLMSKHIF 583
               Y   + + + F  H  ++ RG +    F
Sbjct: 685 LINGYVSKDNMKEAFRVHDEMLQRGFVPDDKF 716



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 84/339 (24%), Positives = 157/339 (46%), Gaps = 29/339 (8%)

Query: 41  TAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSA--- 97
           T I+ +L+N Y  C    +S A     E         + ++ T+++ L + K    A   
Sbjct: 399 TVIYTILINGY--CRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADEL 456

Query: 98  -QNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQM 156
            + M+E+    DF +  ++++   K     DGN               MT+  L +F+ M
Sbjct: 457 FKEMVERGVFPDFYTLTTLIHGYCK-----DGN---------------MTK-ALSLFETM 495

Query: 157 RVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDV 216
            + +L P +     L++   K    +   +++  M+   +  +   +++LI+  C    V
Sbjct: 496 TLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLV 555

Query: 217 DKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSL 276
            +  +L  EM+ K ++  L T NT+I  Y + G   +A    + M  EG+ PD +TYN+L
Sbjct: 556 SEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTL 615

Query: 277 IHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGV 334
           I+ F +E     A  L  ++  +G  PN VTY  ++ G+ R   ++EA  +   M  KG+
Sbjct: 616 INSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGI 675

Query: 335 YPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDN 373
            P   TY S++     +  +++A R+ +EM ++   PD+
Sbjct: 676 NPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQRGFVPDD 714


>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Vitis vinifera]
          Length = 656

 Score =  264 bits (675), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 170/584 (29%), Positives = 280/584 (47%), Gaps = 20/584 (3%)

Query: 1   MASLVALNSDTKFIKTISAIMLKGHWAKLLNPNIASSLTSTAIHKVLLNLYNCCHIPSLS 60
           +AS  +    T+ + + S +  + H+ + ++PN+  +L S         LYN C  P L 
Sbjct: 60  LASSESTPPITEEVISKSVLSSQWHFIEQVSPNLTPALISNV-------LYNLCSKPQLV 112

Query: 61  CAFFKWAESAVPNYKHSL--QSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNA 118
             F          + H L  +S+   + +L +    K A  +L+++      +   + + 
Sbjct: 113 SDFIHHL------HPHCLDTKSYCLAVVLLARLPSPKLALQLLKQVMGTRIATNRELFDE 166

Query: 119 LVKIHDDPDGNSH-VLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAK 177
           L    D     S  V   LV     L+   +  + F  M+   ++P +  C  +L+   K
Sbjct: 167 LTLSRDRLSVKSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLK 226

Query: 178 DRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFT 237
               +M W +Y +M +L + + ++ +N++++  CK   + K  + +  ME    + ++ +
Sbjct: 227 LNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVS 286

Query: 238 YNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK 297
           YNT+I  Y  +G    A  + D M  +GI PD  TY SLI G C+EGR+ EA  LF  + 
Sbjct: 287 YNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMV 346

Query: 298 --GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIR 355
             G  PN VTY TLIDGYC   DLE A   R+ M  KG+ P V TYN ++  L  EGR+ 
Sbjct: 347 EIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMG 406

Query: 356 DANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALI 415
           +A+ ++ EM +K I PD +T N LIN Y + G+   A  + N ML  G+     TY +LI
Sbjct: 407 EADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLI 466

Query: 416 HGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLC 475
           +   +   M  A +L   +LD G SP    ++ +VDG+C   N E    LL E   + + 
Sbjct: 467 YVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVP 526

Query: 476 VDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDI 535
            D   +  L++  C++ KV+ A+ L + M+  GI  D + Y +L   Y R G+ K    +
Sbjct: 527 PDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRV 586

Query: 536 LDDMYRRRLMITLKIYRSFSASYAKDNE--ILDLFWSHVVDRGL 577
            D+M       TL  Y +      K+ E  + +     +V++G+
Sbjct: 587 RDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGI 630



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 114/384 (29%), Positives = 200/384 (52%), Gaps = 19/384 (4%)

Query: 74  YKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVL 133
           +K ++ S+ T+IH  +   + + A+ +L+ + ++                 +PD  S+  
Sbjct: 280 FKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGI---------------EPD--SYTY 322

Query: 134 SWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQ 193
             L+         ++   +FD+M    L+P+      L++        +  +    +MV+
Sbjct: 323 GSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVK 382

Query: 194 LGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYE 253
            G++ ++  YN+L+HA      + + + ++ EM  K +  D  TYN LI  Y + G   +
Sbjct: 383 KGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKK 442

Query: 254 ALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLID 311
           A  + + M  +GI P  VTY SLI+   R  RM+EA  LF  I  +G +P+ + +  ++D
Sbjct: 443 AFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVD 502

Query: 312 GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAP 371
           G+C   ++E A  L + M  K V P  VT+N++++  C+EG++ +A  LL+EM  + I P
Sbjct: 503 GHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKP 562

Query: 372 DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
           D+++ NTLI+ Y + GD   A +V++ ML  G      TY ALI   CK +E D+A+ELL
Sbjct: 563 DHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELL 622

Query: 432 FGMLDAGFSPSYCSYSWLVDGYCN 455
             M++ G SP   +Y  L++G  N
Sbjct: 623 KEMVNKGISPDDSTYLSLIEGMGN 646



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 66/305 (21%), Positives = 129/305 (42%), Gaps = 54/305 (17%)

Query: 54  CHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTP 113
           C+   L  AF    E        S+ ++  ++H L        A +M++++  +  +   
Sbjct: 365 CNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGII--- 421

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
                       PD  ++  + L+  Y+     +    + ++M    + P     T L+ 
Sbjct: 422 ------------PDAITY--NILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIY 467

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
            L++         +++K++  GV  ++ ++N ++   C + +V++   LL EM+ K V  
Sbjct: 468 VLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPP 527

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           D  T+NTL+   C++G   EA  + D M+R GI PD ++YN+LI G+ R G +++A R+ 
Sbjct: 528 DEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVR 587

Query: 294 RDI-------------------------------------KGATPNHVTYTTLIDGYCRA 316
            ++                                     KG +P+  TY +LI+G    
Sbjct: 588 DEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNV 647

Query: 317 NDLEE 321
           + L E
Sbjct: 648 DTLVE 652


>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
          Length = 634

 Score =  264 bits (675), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 170/584 (29%), Positives = 280/584 (47%), Gaps = 20/584 (3%)

Query: 1   MASLVALNSDTKFIKTISAIMLKGHWAKLLNPNIASSLTSTAIHKVLLNLYNCCHIPSLS 60
           +AS  +    T+ + + S +  + H+ + ++PN+  +L S         LYN C  P L 
Sbjct: 38  LASSESTPPITEEVISKSVLSSQWHFIEQVSPNLTPALISNV-------LYNLCSKPQLV 90

Query: 61  CAFFKWAESAVPNYKHSL--QSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNA 118
             F          + H L  +S+   + +L +    K A  +L+++      +   + + 
Sbjct: 91  SDFIHHL------HPHCLDTKSYCLAVVLLARLPSPKLALQLLKQVMGTRIATNRELFDE 144

Query: 119 LVKIHDDPDGNSH-VLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAK 177
           L    D     S  V   LV     L+   +  + F  M+   ++P +  C  +L+   K
Sbjct: 145 LTLSRDRLSVKSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLK 204

Query: 178 DRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFT 237
               +M W +Y +M +L + + ++ +N++++  CK   + K  + +  ME    + ++ +
Sbjct: 205 LNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVS 264

Query: 238 YNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK 297
           YNT+I  Y  +G    A  + D M  +GI PD  TY SLI G C+EGR+ EA  LF  + 
Sbjct: 265 YNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMV 324

Query: 298 --GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIR 355
             G  PN VTY TLIDGYC   DLE A   R+ M  KG+ P V TYN ++  L  EGR+ 
Sbjct: 325 EIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMG 384

Query: 356 DANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALI 415
           +A+ ++ EM +K I PD +T N LIN Y + G+   A  + N ML  G+     TY +LI
Sbjct: 385 EADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLI 444

Query: 416 HGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLC 475
           +   +   M  A +L   +LD G SP    ++ +VDG+C   N E    LL E   + + 
Sbjct: 445 YVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVP 504

Query: 476 VDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDI 535
            D   +  L++  C++ KV+ A+ L + M+  GI  D + Y +L   Y R G+ K    +
Sbjct: 505 PDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRV 564

Query: 536 LDDMYRRRLMITLKIYRSFSASYAKDNE--ILDLFWSHVVDRGL 577
            D+M       TL  Y +      K+ E  + +     +V++G+
Sbjct: 565 RDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGI 608



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 114/384 (29%), Positives = 200/384 (52%), Gaps = 19/384 (4%)

Query: 74  YKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVL 133
           +K ++ S+ T+IH  +   + + A+ +L+ + ++                 +PD  S+  
Sbjct: 258 FKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGI---------------EPD--SYTY 300

Query: 134 SWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQ 193
             L+         ++   +FD+M    L+P+      L++        +  +    +MV+
Sbjct: 301 GSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVK 360

Query: 194 LGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYE 253
            G++ ++  YN+L+HA      + + + ++ EM  K +  D  TYN LI  Y + G   +
Sbjct: 361 KGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKK 420

Query: 254 ALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLID 311
           A  + + M  +GI P  VTY SLI+   R  RM+EA  LF  I  +G +P+ + +  ++D
Sbjct: 421 AFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVD 480

Query: 312 GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAP 371
           G+C   ++E A  L + M  K V P  VT+N++++  C+EG++ +A  LL+EM  + I P
Sbjct: 481 GHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKP 540

Query: 372 DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
           D+++ NTLI+ Y + GD   A +V++ ML  G      TY ALI   CK +E D+A+ELL
Sbjct: 541 DHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELL 600

Query: 432 FGMLDAGFSPSYCSYSWLVDGYCN 455
             M++ G SP   +Y  L++G  N
Sbjct: 601 KEMVNKGISPDDSTYLSLIEGMGN 624



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 66/305 (21%), Positives = 129/305 (42%), Gaps = 54/305 (17%)

Query: 54  CHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTP 113
           C+   L  AF    E        S+ ++  ++H L        A +M++++  +  +   
Sbjct: 343 CNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGII--- 399

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
                       PD  ++  + L+  Y+     +    + ++M    + P     T L+ 
Sbjct: 400 ------------PDAITY--NILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIY 445

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
            L++         +++K++  GV  ++ ++N ++   C + +V++   LL EM+ K V  
Sbjct: 446 VLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPP 505

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           D  T+NTL+   C++G   EA  + D M+R GI PD ++YN+LI G+ R G +++A R+ 
Sbjct: 506 DEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVR 565

Query: 294 RDI-------------------------------------KGATPNHVTYTTLIDGYCRA 316
            ++                                     KG +P+  TY +LI+G    
Sbjct: 566 DEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNV 625

Query: 317 NDLEE 321
           + L E
Sbjct: 626 DTLVE 630


>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Glycine max]
          Length = 623

 Score =  263 bits (671), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 151/500 (30%), Positives = 254/500 (50%), Gaps = 5/500 (1%)

Query: 69  SAVPNYKHSLQ--SHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDP 126
           S + N+ HSL   +    I +L +    K + N+++++ L    +  ++ + L    D  
Sbjct: 82  SHLQNHPHSLDLATSSLAICVLYRLPSPKPSINLIQRLILSPTCTNRTIFDELALARDRV 141

Query: 127 DGNSH-VLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVW 185
           D  +  +   LV  Y  LK   + L+ F  ++    +P++  C  +L+   K   T M W
Sbjct: 142 DAKTTLIFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAW 201

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
            +Y +M ++ + ++++ +N++I+  CK   + K ++ +  ME   V+ ++ TYNT+I  +
Sbjct: 202 VLYAEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGH 261

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNH 303
           C +G    A  +   M+ +G+ PD  TYNS I G C+EGR+ EA  L   +   G  PN 
Sbjct: 262 CLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNA 321

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
           VTY  LIDGYC   DL++A   R+ M +KG+   +VTYN  +  L  EGR+ DA+ ++ E
Sbjct: 322 VTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKE 381

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
           M EK + PD VT N LIN YC+ GD   A  + + M+  G+     TY +LI+   K   
Sbjct: 382 MREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNR 441

Query: 424 MDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRA 483
           M  A  L   +   G  P    ++ L+DG+C   N +   +LL E  +  +  D   Y  
Sbjct: 442 MKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNT 501

Query: 484 LIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRR 543
           L++ +C++ KV+ A++L + M+  GI  D + Y +L   Y + G+ K    + D+M    
Sbjct: 502 LMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTG 561

Query: 544 LMITLKIYRSFSASYAKDNE 563
              T+  Y +      K+ E
Sbjct: 562 FDPTILTYNALIQGLCKNQE 581



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 107/338 (31%), Positives = 183/338 (54%), Gaps = 2/338 (0%)

Query: 187 VYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYC 246
           +++ M   G+  + + YN  I   CK   +++   L+C+M    +  +  TYN LI  YC
Sbjct: 273 IFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYC 332

Query: 247 KKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHV 304
            KG   +A A +D M  +GI   +VTYN  IH    EGRM +A  + +++  KG  P+ V
Sbjct: 333 NKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAV 392

Query: 305 TYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM 364
           T+  LI+GYCR  D + A  L + M  KG+ P +VTY S++  L K  R+++A+ L +++
Sbjct: 393 THNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKI 452

Query: 365 NEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEM 424
            ++ + PD +  N LI+ +C  G+   A ++   M    ++ D+ TY  L+ G+C+  ++
Sbjct: 453 QQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKV 512

Query: 425 DIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRAL 484
           + A++LL  M   G  P + SY+ L+ GY  + + +   ++ DE ++ G    +  Y AL
Sbjct: 513 EEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNAL 572

Query: 485 IRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYA 522
           I+  CK ++ ++A+ L   M   GI  D   Y S+  A
Sbjct: 573 IQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSIIEA 610



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 74/243 (30%), Positives = 129/243 (53%), Gaps = 2/243 (0%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D   +  +MR   +MP      +L+N   +       + +  +MV  G+   +  Y  LI
Sbjct: 374 DADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLI 433

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           +   K + + + + L  +++ + +  D+  +N LI  +C  G    A  +   M+   + 
Sbjct: 434 YVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVL 493

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRL 325
           PD +TYN+L+ G+CREG++ EAR+L  ++K  G  P+H++Y TLI GY +  D+++A R+
Sbjct: 494 PDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRV 553

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
           R+ M   G  P ++TYN++++ LCK      A  LL EM  K I PD+ T  ++I A   
Sbjct: 554 RDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSIIEAMET 613

Query: 386 IGD 388
           + D
Sbjct: 614 VDD 616



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 52/171 (30%), Positives = 93/171 (54%), Gaps = 2/171 (1%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           +F +++   L+P +     L++    +   D  +++ K+M  + V+ +   YN L+   C
Sbjct: 448 LFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYC 507

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           +   V++  +LL EM+ + ++ D  +YNTLI+ Y K+G   +A  V+D M   G  P I+
Sbjct: 508 REGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTIL 567

Query: 272 TYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLE 320
           TYN+LI G C+      A  L +++  KG TP+  TY ++I+     +DLE
Sbjct: 568 TYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSIIEAMETVDDLE 618



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 54/224 (24%), Positives = 91/224 (40%), Gaps = 22/224 (9%)

Query: 38  LTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSA 97
           +     H +L+N Y  C       AF    E      + +L ++ ++I++L K    K A
Sbjct: 388 MPDAVTHNILINGY--CRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEA 445

Query: 98  QNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGL------- 150
             +  KI     L    V NAL+  H   +GN      L+    N+K+  D +       
Sbjct: 446 DALFSKIQQEGLLPDIIVFNALIDGHC-ANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQ 504

Query: 151 ------------QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVA 198
                       Q+ D+M+   + P   +   L++  +K       ++V  +M+  G   
Sbjct: 505 GYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDP 564

Query: 199 NIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLI 242
            I  YN LI   CK+ + +  E+LL EM  K +  D  TY ++I
Sbjct: 565 TILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSII 608


>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 719

 Score =  262 bits (670), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 150/552 (27%), Positives = 269/552 (48%), Gaps = 4/552 (0%)

Query: 31  NPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTK 90
           N N+ + L       V+  LY C +  SL   F        PN+KH+  S   MIHIL +
Sbjct: 56  NSNVRNHLIRLNPLAVVEVLYRCRNDLSLGQRFVDQLGFNFPNFKHTSLSLSAMIHILVR 115

Query: 91  NKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGL 150
           +     AQ+ + ++  R  +S   ++N+LV  + +   N  V   L+  +   +  ++  
Sbjct: 116 SGRLSDAQSCVLRMIRRSGVSRVEIVNSLVSTYSNCGSNDSVFDLLIRTFVQARKLREAY 175

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           + F  +R       + AC  L+ SL +    ++ W++Y+++ + GV  N++  N++++A 
Sbjct: 176 EAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEISRSGVGVNVYTLNIMVNAL 235

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           CK   ++KV   L E++ K V  D+ TYNTLI+ Y  +G+  EA  +   M  +G SP +
Sbjct: 236 CKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGV 295

Query: 271 VTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
            TYN++I+G C+ G+   A+ +F ++   G +P+  TY +L+   C+  D  E   +   
Sbjct: 296 YTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSD 355

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M ++ V P +V ++S++    + G +  A    N + E  + PDNV    LI  YC+ G 
Sbjct: 356 MRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGM 415

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
            + AM ++N ML+ G  +D  TY  ++HG CK K +  A +L   M + G  P   + + 
Sbjct: 416 ISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTI 475

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG 508
           L+DG+C   N +  ++L  +   + + +DV  Y  L+  F K   +D A+ ++  M    
Sbjct: 476 LIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKE 535

Query: 509 ILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD-- 566
           IL   + ++ L  A    G       + D+M  + +  T+ I  S    Y +     D  
Sbjct: 536 ILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGE 595

Query: 567 LFWSHVVDRGLM 578
           +F   ++  G +
Sbjct: 596 IFLEKMISEGFV 607



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 115/446 (25%), Positives = 207/446 (46%), Gaps = 39/446 (8%)

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           L+  Y++  + ++  ++   M      P ++    ++N L K    +   +V+ +M++ G
Sbjct: 266 LISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSG 325

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADL---------FT--------- 237
           +  +   Y  L+   CK  D  + E +  +M  +DV  DL         FT         
Sbjct: 326 LSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKAL 385

Query: 238 -----------------YNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGF 280
                            Y  LI  YC+KGM  EA+ +++ M ++G + D+VTYN+++HG 
Sbjct: 386 MYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGL 445

Query: 281 CREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGV 338
           C+   + EA +LF ++  +G  P+  T T LIDG+C+  +L+ A+ L + M  K +   V
Sbjct: 446 CKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDV 505

Query: 339 VTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNR 398
           VTYN++L    K G I  A  +  +M  K+I P  ++ + L+NA C  G  + A +V + 
Sbjct: 506 VTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDE 565

Query: 399 MLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNN 458
           M+   +        ++I G+C++      +  L  M+  GF P   SY+ L+ G+  + N
Sbjct: 566 MISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEEN 625

Query: 459 EEALLKLLDEFVSR--GLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIY 516
                 L+ +   +  GL  DV  Y +++  FC++ ++  A+ +   M   G+  D   Y
Sbjct: 626 MSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRSTY 685

Query: 517 TSLAYAYWRAGEPKACSDILDDMYRR 542
           TSL   +             D+M +R
Sbjct: 686 TSLINGFVSQDNLTEAFRFHDEMLQR 711



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 93/332 (28%), Positives = 174/332 (52%), Gaps = 4/332 (1%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           L  F+ ++   L+P     T+L+    +  +      +  +M+Q G   ++  YN ++H 
Sbjct: 385 LMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHG 444

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
            CK   + + +KL  EM  + +  D +T   LI  +CK G    A+ +  +M+ + I  D
Sbjct: 445 LCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLD 504

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLRE 327
           +VTYN+L+ GF + G +  A+ ++ D+  K   P  ++++ L++  C    L EA R+ +
Sbjct: 505 VVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWD 564

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
            M +K + P V+  NS+++  C+ G   D    L +M  +   PD ++ NTLI  + K  
Sbjct: 565 EMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEE 624

Query: 388 DTASAMKVKNRMLE--AGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
           + + A  +  +M E   GL+ D FTY +++HGFC+  +M  A+ +L  M++ G +P   +
Sbjct: 625 NMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRST 684

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVD 477
           Y+ L++G+ +++N     +  DE + RG   D
Sbjct: 685 YTSLINGFVSQDNLTEAFRFHDEMLQRGFSPD 716



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 71/298 (23%), Positives = 142/298 (47%), Gaps = 21/298 (7%)

Query: 80  SHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIF 139
           ++ T++H L K K    A  +  ++  R                  PD  S+ L+ L+  
Sbjct: 437 TYNTILHGLCKRKMLGEADKLFNEMTERGLF---------------PD--SYTLTILIDG 479

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
           +  L   Q+ +++F +M+   +   +     LL+   K    D   +++  MV   ++  
Sbjct: 480 HCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPT 539

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
              +++L++A C    + +  ++  EM  K ++  +   N++I  YC+ G   +     +
Sbjct: 540 PISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLE 599

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK----GATPNHVTYTTLIDGYCR 315
           +M  EG  PD ++YN+LI+GF +E  M +A  L + ++    G  P+  TY +++ G+CR
Sbjct: 600 KMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCR 659

Query: 316 ANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDN 373
            N ++EA  +   M  +GV P   TY S++     +  + +A R  +EM ++  +PD+
Sbjct: 660 ENQMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRGFSPDD 717


>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 677

 Score =  259 bits (662), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 140/497 (28%), Positives = 252/497 (50%), Gaps = 4/497 (0%)

Query: 90  KNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDG 149
           ++K    AQ ++ ++  R  +S   ++ +L+ +      ++ V   L+  Y   +   +G
Sbjct: 75  RSKRLSDAQTLILRMIRRSGVSRVEIVESLISMSSTCGVDNLVFDLLIRSYVQARKLNEG 134

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
              F  +R    +  ++AC  LL  L K    D+ W+VY ++ + G+  N++  N++++A
Sbjct: 135 TDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVYNEIARSGIELNVYTLNIMVNA 194

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
            CK   +D V+  L +ME K + AD+ TYNTLI  YC++G+  EA  V + M  +G+ P 
Sbjct: 195 LCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPT 254

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLRE 327
           + TYN++I+G C++GR   A+ +F ++   G +P+  TY TL+   CR N+  EA  +  
Sbjct: 255 LFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFS 314

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
            M  +GV P +++++S++    + G +  A     +M    + PDNV    LIN YC+ G
Sbjct: 315 DMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNG 374

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
             + A++++++MLE G  LD   Y  +++G CK K +  A  L   M++ G  P +C+++
Sbjct: 375 MMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFT 434

Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGN 507
            L+ G+C + N    L L      + +  D+  Y  LI  FCK  +++ A  L+N M   
Sbjct: 435 TLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISR 494

Query: 508 GILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI--L 565
            I  + + Y  L   Y   G       + D+M R+ +  TL    +    Y +  ++   
Sbjct: 495 KIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKA 554

Query: 566 DLFWSHVVDRGLMSKHI 582
           D F   ++  G+    I
Sbjct: 555 DEFLGKMISEGVGPDSI 571



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 114/444 (25%), Positives = 215/444 (48%), Gaps = 37/444 (8%)

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           L+  Y    +  +  +V + M    L P L     ++N L K         V+ +M+ +G
Sbjct: 226 LINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIG 285

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIAL----------- 244
           +  +   YN L+   C++++  + + +  +M  + V  DL ++++LI +           
Sbjct: 286 LSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQAL 345

Query: 245 ------------------------YCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGF 280
                                   YC+ GM  EAL ++D+M  +G + D+V YN++++G 
Sbjct: 346 MYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGL 405

Query: 281 CREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGV 338
           C++  + +A  LF ++  +G  P+  T+TTLI G+C+  ++ +AL L  +M  K + P +
Sbjct: 406 CKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDI 465

Query: 339 VTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNR 398
           VTYN ++   CK   +  AN L NEM  +KI P++++   L+N YC +G  + A ++ + 
Sbjct: 466 VTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDE 525

Query: 399 MLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNN 458
           M+  G+     T   +I G+C++ ++  A E L  M+  G  P   +Y+ L++G+     
Sbjct: 526 MIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEY 585

Query: 459 EEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTS 518
            +    L+++  ++GL  DV  Y  ++  FC++ ++  A+ +   M   GI  D   YT+
Sbjct: 586 MDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDPDRSTYTT 645

Query: 519 LAYAYWRAGEPKACSDILDDMYRR 542
           L   Y      K      D+M +R
Sbjct: 646 LINGYVSQDNLKEAFRFHDEMLQR 669



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 116/406 (28%), Positives = 206/406 (50%), Gaps = 4/406 (0%)

Query: 109 FLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHAC 168
           ++    V N ++ I   PD  ++  + L++         +   +F  M    + P L + 
Sbjct: 271 YVRAKGVFNEMLSIGLSPDTTTY--NTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISF 328

Query: 169 TVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEF 228
           + L+   +++   D     ++ M   G+V +  +Y +LI+  C++  + +  ++  +M  
Sbjct: 329 SSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLE 388

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
           +    D+  YNT++   CKK +  +A A+ D M   G+ PD  T+ +LIHG C+EG M +
Sbjct: 389 QGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGK 448

Query: 289 ARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILR 346
           A  LF  +  K   P+ VTY  LIDG+C+  ++E+A  L   M ++ ++P  ++Y  ++ 
Sbjct: 449 ALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVN 508

Query: 347 KLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLML 406
             C  G + +A RL +EM  K I P  VTCNT+I  YC+ GD + A +   +M+  G+  
Sbjct: 509 GYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGP 568

Query: 407 DQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLL 466
           D  TY  LI+GF K + MD A  L+  M   G  P   +Y+ +++G+C +   +    +L
Sbjct: 569 DSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELIL 628

Query: 467 DEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGD 512
            + + RG+  D S Y  LI  +  ++ +  A R  + M   G + D
Sbjct: 629 RKMIERGIDPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQRGFVPD 674



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 138/290 (47%), Gaps = 16/290 (5%)

Query: 100 MLEKIALRDFLSTPSVLNALVKIHDDPDGNS------------HVLSWLVIFYANLKMTQ 147
           MLE+    D ++  ++LN L K     D N+               ++  + + + K   
Sbjct: 386 MLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGN 445

Query: 148 DG--LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNV 205
            G  L +F  M   N+ P +    +L++   K    +   +++ +M+   +  N   Y +
Sbjct: 446 MGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAI 505

Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
           L++  C    V +  +L  EM  K ++  L T NT+I  YC+ G   +A     +M  EG
Sbjct: 506 LVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEG 565

Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFR--DIKGATPNHVTYTTLIDGYCRANDLEEAL 323
           + PD +TYN+LI+GF +   M +A  L    + KG  P+ VTY  +++G+CR   ++EA 
Sbjct: 566 VGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAE 625

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDN 373
            +   M  +G+ P   TY +++     +  +++A R  +EM ++   PD+
Sbjct: 626 LILRKMIERGIDPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQRGFVPDD 675


>gi|15218241|ref|NP_172439.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75097039|sp|O04491.1|PPR26_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g09680
 gi|2160161|gb|AAB60724.1| F21M12.7 gene product [Arabidopsis thaliana]
 gi|332190358|gb|AEE28479.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 607

 Score =  259 bits (661), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 147/500 (29%), Positives = 265/500 (53%), Gaps = 9/500 (1%)

Query: 32  PNIASSLTSTAIHKV--LLNLYNCCHIPSLSC-AFFKWAESAVPNYKHSLQSHWTMIHIL 88
           P+I   L S ++H V  L+N +N   +P  S  AFFK+  S  P ++ ++++++ +   L
Sbjct: 71  PSIRKVLPSLSVHHVVDLIN-HNPLSLPQRSIFAFFKFISSQ-PGFRFTVETYFVLARFL 128

Query: 89  TKNKHFKSAQNMLEKIALRDFL-STPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQ 147
             ++ F  AQ+++E +  R    S  SV  +LV++   P     ++  L+I Y +L    
Sbjct: 129 AVHEMFTEAQSLIELVVSRKGKNSASSVFISLVEMRVTP-MCGFLVDALMITYTDLGFIP 187

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D +Q F   R H     +  C  LL+ + K   T  +W  Y +++  G   N++++N+L+
Sbjct: 188 DAIQCFRLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILM 247

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           +  CK  ++   +K+  E+  + ++  + ++NTLI  YCK G   E   ++ +ME+    
Sbjct: 248 NKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTR 307

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
           PD+ TY++LI+  C+E +M  A  LF ++  +G  PN V +TTLI G+ R  +++     
Sbjct: 308 PDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKES 367

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
            + M +KG+ P +V YN+++   CK G +  A  +++ M  + + PD +T  TLI+ +C+
Sbjct: 368 YQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCR 427

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            GD  +A++++  M + G+ LD+  + AL+ G CK   +  A+  L  ML AG  P   +
Sbjct: 428 GGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVT 487

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+ ++D +C K + +   KLL E  S G    V  Y  L+   CK  ++  A  L + M 
Sbjct: 488 YTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAML 547

Query: 506 GNGILGDSVIYTSLAYAYWR 525
             G++ D + Y +L   + R
Sbjct: 548 NIGVVPDDITYNTLLEGHHR 567



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 71/241 (29%), Positives = 128/241 (53%), Gaps = 3/241 (1%)

Query: 327 EVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKI 386
           E++ A G    V  +N ++ K CKEG I DA ++ +E+ ++ + P  V+ NTLIN YCK+
Sbjct: 230 EILDA-GFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKV 288

Query: 387 GDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSY 446
           G+     ++K++M ++    D FTY ALI+  CK  +MD A  L   M   G  P+   +
Sbjct: 289 GNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIF 348

Query: 447 SWLVDGYCNKNNEEALLK-LLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           + L+ G+ ++N E  L+K    + +S+GL  D+ +Y  L+  FCK   +  A+ + + M 
Sbjct: 349 TTLIHGH-SRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMI 407

Query: 506 GNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEIL 565
             G+  D + YT+L   + R G+ +   +I  +M +  + +    + +      K+  ++
Sbjct: 408 RRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVI 467

Query: 566 D 566
           D
Sbjct: 468 D 468



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 69/244 (28%), Positives = 119/244 (48%)

Query: 298 GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDA 357
           G   N   +  L++ +C+  ++ +A ++ + +  + + P VV++N+++   CK G + + 
Sbjct: 235 GFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEG 294

Query: 358 NRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHG 417
            RL ++M + +  PD  T + LINA CK      A  + + M + GL+ +   +  LIHG
Sbjct: 295 FRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHG 354

Query: 418 FCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVD 477
             +  E+D+ KE    ML  G  P    Y+ LV+G+C   +  A   ++D  + RGL  D
Sbjct: 355 HSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPD 414

Query: 478 VSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILD 537
              Y  LI  FC+   V+ A  +   M  NGI  D V +++L     + G        L 
Sbjct: 415 KITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALR 474

Query: 538 DMYR 541
           +M R
Sbjct: 475 EMLR 478



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 47/190 (24%), Positives = 91/190 (47%)

Query: 376 CNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGML 435
           C  L++   K+  T +       +L+AG  L+ + +  L++ FCK   +  A+++   + 
Sbjct: 208 CGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEIT 267

Query: 436 DAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVD 495
                P+  S++ L++GYC   N +   +L  +        DV  Y ALI   CK+ K+D
Sbjct: 268 KRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMD 327

Query: 496 YAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFS 555
            A  LF+ M   G++ + VI+T+L + + R GE     +    M  + L   + +Y +  
Sbjct: 328 GAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLV 387

Query: 556 ASYAKDNEIL 565
             + K+ +++
Sbjct: 388 NGFCKNGDLV 397


>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
 gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
 gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
 gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
 gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 729

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 152/556 (27%), Positives = 268/556 (48%), Gaps = 4/556 (0%)

Query: 31  NPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTK 90
           N N+ + L       V+  LY C +  +L   F        PN+KH+  S   MIHIL +
Sbjct: 66  NNNVRNHLIRLNPLAVVEVLYRCRNDLTLGQRFVDQLGFHFPNFKHTSLSLSAMIHILVR 125

Query: 91  NKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGL 150
           +     AQ+ L ++  R  +S   ++N+L     +   N  V   L+  Y   +  ++  
Sbjct: 126 SGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIRTYVQARKLREAH 185

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           + F  +R       + AC  L+ SL +    ++ W VY+++ + GV  N++  N++++A 
Sbjct: 186 EAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNAL 245

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           CK   ++KV   L +++ K V  D+ TYNTLI+ Y  KG+  EA  + + M  +G SP +
Sbjct: 246 CKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGV 305

Query: 271 VTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
            TYN++I+G C+ G+   A+ +F ++   G +P+  TY +L+   C+  D+ E  ++   
Sbjct: 306 YTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSD 365

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M ++ V P +V ++S++    + G +  A    N + E  + PDNV    LI  YC+ G 
Sbjct: 366 MRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGM 425

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
            + AM ++N ML+ G  +D  TY  ++HG CK K +  A +L   M +    P   + + 
Sbjct: 426 ISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTI 485

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG 508
           L+DG+C   N +  ++L  +   + + +DV  Y  L+  F K   +D A+ ++  M    
Sbjct: 486 LIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKE 545

Query: 509 ILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD-- 566
           IL   + Y+ L  A    G       + D+M  + +  T+ I  S    Y +     D  
Sbjct: 546 ILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGE 605

Query: 567 LFWSHVVDRGLMSKHI 582
            F   ++  G +   I
Sbjct: 606 SFLEKMISEGFVPDCI 621



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 117/447 (26%), Positives = 210/447 (46%), Gaps = 41/447 (9%)

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           L+  Y++  + ++  ++ + M      P ++    ++N L K    +   +V+ +M++ G
Sbjct: 276 LISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSG 335

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADL---------FT--------- 237
           +  +   Y  L+   CK  DV + EK+  +M  +DV  DL         FT         
Sbjct: 336 LSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKAL 395

Query: 238 -----------------YNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGF 280
                            Y  LI  YC+KGM   A+ +++ M ++G + D+VTYN+++HG 
Sbjct: 396 MYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGL 455

Query: 281 CREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGV 338
           C+   + EA +LF ++  +   P+  T T LIDG+C+  +L+ A+ L + M  K +   V
Sbjct: 456 CKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDV 515

Query: 339 VTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNR 398
           VTYN++L    K G I  A  +  +M  K+I P  ++ + L+NA C  G  A A +V + 
Sbjct: 516 VTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDE 575

Query: 399 MLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNN 458
           M+   +        ++I G+C++      +  L  M+  GF P   SY+ L+ G+  + N
Sbjct: 576 MISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREEN 635

Query: 459 EE---ALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVI 515
                 L+K ++E    GL  DV  Y +++  FC++ ++  A+ +   M   G+  D   
Sbjct: 636 MSKAFGLVKKMEE-EQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRST 694

Query: 516 YTSLAYAYWRAGEPKACSDILDDMYRR 542
           YT +   +           I D+M +R
Sbjct: 695 YTCMINGFVSQDNLTEAFRIHDEMLQR 721



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 92/332 (27%), Positives = 176/332 (53%), Gaps = 4/332 (1%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           L  F+ ++   L+P     T+L+    +  +  +   +  +M+Q G   ++  YN ++H 
Sbjct: 395 LMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHG 454

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
            CK   + + +KL  EM  + +  D +T   LI  +CK G    A+ +  +M+ + I  D
Sbjct: 455 LCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLD 514

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLRE 327
           +VTYN+L+ GF + G +  A+ ++ D+  K   P  ++Y+ L++  C    L EA R+ +
Sbjct: 515 VVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWD 574

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
            M +K + P V+  NS+++  C+ G   D    L +M  +   PD ++ NTLI  + +  
Sbjct: 575 EMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREE 634

Query: 388 DTASAMKVKNRMLE--AGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
           + + A  +  +M E   GL+ D FTY +++HGFC+  +M  A+ +L  M++ G +P   +
Sbjct: 635 NMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRST 694

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVD 477
           Y+ +++G+ +++N     ++ DE + RG   D
Sbjct: 695 YTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/343 (23%), Positives = 158/343 (46%), Gaps = 23/343 (6%)

Query: 35  ASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHF 94
           A  +    I+ +L+  Y  C    +S A     E         + ++ T++H L K K  
Sbjct: 404 AGLIPDNVIYTILIQGY--CRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKML 461

Query: 95  KSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFD 154
             A  +  ++  R                  PD  S+ L+ L+  +  L   Q+ +++F 
Sbjct: 462 GEADKLFNEMTERALF---------------PD--SYTLTILIDGHCKLGNLQNAMELFQ 504

Query: 155 QMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSS 214
           +M+   +   +     LL+   K    D   +++  MV   ++     Y++L++A C   
Sbjct: 505 KMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKG 564

Query: 215 DVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYN 274
            + +  ++  EM  K+++  +   N++I  YC+ G   +  +  ++M  EG  PD ++YN
Sbjct: 565 HLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYN 624

Query: 275 SLIHGFCREGRMREARRLFRDIK----GATPNHVTYTTLIDGYCRANDLEEALRLREVMA 330
           +LI+GF RE  M +A  L + ++    G  P+  TY +++ G+CR N ++EA  +   M 
Sbjct: 625 TLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMI 684

Query: 331 AKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDN 373
            +GV P   TY  ++     +  + +A R+ +EM ++  +PD+
Sbjct: 685 ERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDD 727


>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
 gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
          Length = 610

 Score =  256 bits (654), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 141/504 (27%), Positives = 258/504 (51%), Gaps = 5/504 (0%)

Query: 84  MIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVK-IHDDPDGNSHVLSWLVIFYAN 142
           M+H+  +++    AQ ++ ++  R  +S   V+ ALV  +  +   N+ V   L+  Y  
Sbjct: 1   MVHVFVRSRRLSDAQALILRMIRRSGVSRVEVVEALVSSMCGNCGTNNLVFDLLIRTYVQ 60

Query: 143 LKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHL 202
            +  ++G + F  +R    +  ++AC  LL  L K    ++ W+V++++V+ G+  N++ 
Sbjct: 61  ARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVHREVVRSGIELNVYT 120

Query: 203 YNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRME 262
            N++++A CK    D V+  L EME   + AD+ TYNTLI  YC++G+  EA  + + M 
Sbjct: 121 LNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMA 180

Query: 263 REGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLE 320
            +G+ P + TYN++I+G C++GR   A+ +  ++   G +P+  TY TL+   CR ++  
Sbjct: 181 DKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFS 240

Query: 321 EALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLI 380
           EA  +   M  +GV P +V+++S++    +   +  A     +M +  + PDNV    L+
Sbjct: 241 EAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLM 300

Query: 381 NAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFS 440
           + YC+ G+   A+K+++ MLE G +LD   Y  +++G CK K +  A +L   M++ G  
Sbjct: 301 HGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGAL 360

Query: 441 PSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRL 500
           P + +++ L+ G+C   N    L L      R +  D+  Y  LI  FCK  +++ A  L
Sbjct: 361 PDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASEL 420

Query: 501 FNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAK 560
           ++ M    I  + + Y  L  AY   G       + D M  + +  TL    +    Y +
Sbjct: 421 WDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCR 480

Query: 561 --DNEILDLFWSHVVDRGLMSKHI 582
             D+   D F   ++ +G+   HI
Sbjct: 481 SGDSSKADEFLGRMIAKGVAPDHI 504



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 114/369 (30%), Positives = 197/369 (53%), Gaps = 8/369 (2%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           ++F +M    ++P L + + L+   +++R  D     ++ M + G+V +  +Y VL+H  
Sbjct: 244 EIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGY 303

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           C++ ++ +  K+  EM  +    D+  YNT++   CK+ M  +A  + D M   G  PD 
Sbjct: 304 CRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDF 363

Query: 271 VTYNSLIHGFCREGRMREARRLF-----RDIKGATPNHVTYTTLIDGYCRANDLEEALRL 325
            T+ +LIHG C++G M +A  LF     R+IK   P+ V Y TLIDG+C+  ++E+A  L
Sbjct: 364 YTFTTLIHGHCQDGNMTKALSLFGTMTQRNIK---PDIVAYNTLIDGFCKVGEMEKASEL 420

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
            + M ++ ++P  +TY  ++   C  G + +A RL + M EK I P  VTCNT+I  YC+
Sbjct: 421 WDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCR 480

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            GD++ A +   RM+  G+  D  +Y  LI+GF +   MD A   +  M   G  P   +
Sbjct: 481 SGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIIT 540

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+ +++G+C +   +    +L + + +G+  D S Y ALI     ++ ++ A R  + M 
Sbjct: 541 YNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEML 600

Query: 506 GNGILGDSV 514
             G   D V
Sbjct: 601 QRGFAPDDV 609



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 109/421 (25%), Positives = 209/421 (49%), Gaps = 37/421 (8%)

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           L+  Y    + ++  ++ + M    L P L     ++N L K         +  +M+ +G
Sbjct: 159 LIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIG 218

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIAL----------- 244
           +  +   YN L+   C+  +  + +++  EM  + V  DL ++++LIA+           
Sbjct: 219 LSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQAL 278

Query: 245 ------------------------YCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGF 280
                                   YC+ G   EAL ++D M  +G   D++ YN++++G 
Sbjct: 279 VYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGL 338

Query: 281 CREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGV 338
           C+E  + +A +LF ++  +GA P+  T+TTLI G+C+  ++ +AL L   M  + + P +
Sbjct: 339 CKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDI 398

Query: 339 VTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNR 398
           V YN+++   CK G +  A+ L + M  +KI P+++T   LINAYC +G  + A ++ + 
Sbjct: 399 VAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDV 458

Query: 399 MLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNN 458
           M+E G+     T   +I G+C++ +   A E L  M+  G +P + SY+ L++G+  ++N
Sbjct: 459 MIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDN 518

Query: 459 EEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTS 518
            +     +++    GL  D+  Y  ++  FC++ ++  A+ +   M   GI  D   YT+
Sbjct: 519 MDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTA 578

Query: 519 L 519
           L
Sbjct: 579 L 579


>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
          Length = 577

 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 156/517 (30%), Positives = 268/517 (51%), Gaps = 11/517 (2%)

Query: 8   NSDTKFIKTISAIMLKGHWAKLLNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWA 67
           NS T    TIS ++ K HW+KL      + +  T    +L +L+N    P L   +FKW 
Sbjct: 43  NSHTFDTPTISQLIAKQHWSKL-----KTIVKETNPSSLLQHLFNSEAQPDLILCYFKWT 97

Query: 68  ESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPD 127
           +       H+++    ++H+L   K++   + +L+  A     S  ++ ++L  +     
Sbjct: 98  QKEFGAI-HNVEQFCRLLHLLANAKNYNKIRALLDSFAKNAHYSNSTIFHSLSVLGSWGC 156

Query: 128 GNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKV 187
            NS ++  LV  Y         L+ FD+   +       +C  +L SL K+    +V  V
Sbjct: 157 ANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESV 216

Query: 188 YKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCK 247
           YK+M++  +  N+  ++V+I+  CK     K   ++ +M+       + TYNT+I  YCK
Sbjct: 217 YKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCK 276

Query: 248 KGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVT 305
            G  ++A A+   M  + I P+ +T+N LI GFCR+  +  A+++F ++  +G  PN VT
Sbjct: 277 AGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVT 336

Query: 306 YTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMN 365
           Y +LI+G C    L+EAL L++ M+  G+ P VVTYN+++   CK+  +++A  +L+++ 
Sbjct: 337 YNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIG 396

Query: 366 EKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMD 425
           ++ +AP+ +T NTLI+AY K G    A  +++ ML+ G+  +  TY  LI GFC+   + 
Sbjct: 397 KRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVK 456

Query: 426 IAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFV---SRGLCVDVSVYR 482
            A++L   M   G      +Y+ LVD  C K      ++LLDE      +G   ++  Y 
Sbjct: 457 EARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYN 516

Query: 483 ALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
            LI+ FC K K++ A RL N M   G++ +   Y  L
Sbjct: 517 VLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDIL 553



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 104/310 (33%), Positives = 169/310 (54%), Gaps = 5/310 (1%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           Q    V + M+     P +     +++   K         + K+MV   +  N   +N+L
Sbjct: 246 QKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNIL 305

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           I   C+  +V   +K+  EM+ + ++ ++ TYN+LI   C  G   EAL +QD+M   G+
Sbjct: 306 IDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGL 365

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
            P++VTYN+LI+GFC++  ++EAR +  DI  +G  PN +T+ TLID Y +A  +++A  
Sbjct: 366 KPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFL 425

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           LR +M   GV P V TYN ++   C+EG +++A +L  EM    +  D VT N L++A C
Sbjct: 426 LRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALC 485

Query: 385 KIGDTASAMKVKNRML---EAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
           K G+T  A+++ + M    + G   +  TY  LI GFC   +++ A  LL  ML+ G  P
Sbjct: 486 KKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIP 545

Query: 442 SYCSYSWLVD 451
           +  +Y  L D
Sbjct: 546 NRTTYDILRD 555



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 104/344 (30%), Positives = 183/344 (53%), Gaps = 2/344 (0%)

Query: 198 ANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAV 257
           AN  + ++L+ A  K+ ++D   +          R    + N ++    K+G      +V
Sbjct: 157 ANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESV 216

Query: 258 QDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCR 315
              M R  I  ++VT++ +I+G C+ G+ ++A  +  D+K  G +P+ +TY T+IDGYC+
Sbjct: 217 YKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCK 276

Query: 316 ANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVT 375
           A  + +A  L + M AK ++P  +T+N ++   C++  +  A ++  EM  + + P+ VT
Sbjct: 277 AGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVT 336

Query: 376 CNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGML 435
            N+LIN  C  G    A+ ++++M   GL  +  TY ALI+GFCK K +  A+E+L  + 
Sbjct: 337 YNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIG 396

Query: 436 DAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVD 495
             G +P+  +++ L+D Y      +    L    +  G+C +VS Y  LI  FC++  V 
Sbjct: 397 KRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVK 456

Query: 496 YAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
            A++L   M+GNG+  D V Y  L  A  + GE +    +LD+M
Sbjct: 457 EARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEM 500



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 72/246 (29%), Positives = 116/246 (47%), Gaps = 40/246 (16%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           +VF++M+   L P++     L+N L  +   D    +  KM  +G+  N+  YN LI+  
Sbjct: 320 KVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGF 379

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           CK   + +  ++L ++  + +  ++ T+NTLI  Y K G   +A  ++  M   G+ P++
Sbjct: 380 CKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNV 439

Query: 271 VTYNSLIHGFCREGRMREARRLFRDI---------------------------------- 296
            TYN LI GFCREG ++EAR+L +++                                  
Sbjct: 440 STYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDE 499

Query: 297 ------KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
                 KG   N VTY  LI G+C    LEEA RL   M  KG+ P   TY+ +  ++ +
Sbjct: 500 MTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMME 559

Query: 351 EGRIRD 356
           +G I D
Sbjct: 560 KGFIPD 565



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 79/278 (28%), Positives = 130/278 (46%), Gaps = 2/278 (0%)

Query: 302 NHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLL 361
           N +    L+  Y +  +++ AL   +     G     ++ N +L  L KEGRI     + 
Sbjct: 158 NSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVY 217

Query: 362 NEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKA 421
            EM  ++I  + VT + +IN  CK+G    A  V   M   G      TY  +I G+CKA
Sbjct: 218 KEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKA 277

Query: 422 KEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVY 481
            +M  A  LL  M+     P+  +++ L+DG+C   N  A  K+ +E   +GL  +V  Y
Sbjct: 278 GKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTY 337

Query: 482 RALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
            +LI   C   K+D A  L + M G G+  + V Y +L   + +    K   ++LDD+ +
Sbjct: 338 NSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGK 397

Query: 542 RRLMITLKIYRSFSASYAKDNEILDLFW--SHVVDRGL 577
           R L   +  + +   +Y K   + D F   S ++D G+
Sbjct: 398 RGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGV 435


>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  256 bits (653), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 144/517 (27%), Positives = 255/517 (49%), Gaps = 2/517 (0%)

Query: 50  LYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDF 109
           L+ C     L   F        PN+KHS  S   M+H L + +    AQ  + ++  +  
Sbjct: 107 LFRCRGDLHLGLKFIGLVSYHFPNFKHSSXSLSAMVHFLVRGRRLSEAQACILRMVRKSG 166

Query: 110 LSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACT 169
           +S   V+ +L+           +   LV  Y   K  ++G + F  +R   +   ++AC 
Sbjct: 167 VSRVKVVESLISTCFYFGSVGLIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACN 226

Query: 170 VLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFK 229
            LL  L +    D+ W++Y ++V+ G+  N++  N++++A CK    + V   L +ME K
Sbjct: 227 KLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGK 286

Query: 230 DVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA 289
            V AD+ TYNTLI  YC++G+  EA  + +     G+ P ++TYN++++G C+ G+   A
Sbjct: 287 GVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRA 346

Query: 290 RRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRK 347
           + +  ++   G TPN  TY TL+   CR +++ EA  + + M+ +GV P +V+++S++  
Sbjct: 347 KDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGV 406

Query: 348 LCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLD 407
           L + G +  A     EM    I PDNV    LI+ +C+ G  + A+K+++ ML  G  +D
Sbjct: 407 LARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMD 466

Query: 408 QFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLD 467
             TY   ++G CK K    A  L   M++ G  P + +++ L+ GYC   N +  L L +
Sbjct: 467 VVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFE 526

Query: 468 EFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
             V   L  D   Y  LI  FCK  ++  A+ L++ M    I+ D + Y ++   +  +G
Sbjct: 527 AMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSG 586

Query: 528 EPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
                 ++ D M  + +   L    +    Y +  ++
Sbjct: 587 LLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDM 623



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 133/447 (29%), Positives = 214/447 (47%), Gaps = 37/447 (8%)

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           L+  Y    + ++  Q+ +      + P L     +L  L K    D    V  +M+QLG
Sbjct: 298 LINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLG 357

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
           +  N   YN L+   C+  ++ + +++  EM  + V  DL ++++LI +  + G  Y+AL
Sbjct: 358 LTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQAL 417

Query: 256 AVQDRMEREGISPDIVTYNSLIHGFCREG------RMRE---ARRLFRDI---------- 296
                MER GI PD V Y  LI GFCR G      +MR+   AR  F D+          
Sbjct: 418 MHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGL 477

Query: 297 ------------------KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGV 338
                             +G  P+  T+TTLI GYC+  ++++AL L E M    + P  
Sbjct: 478 CKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDK 537

Query: 339 VTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNR 398
           VTYN+++   CK G +  A  L ++M  K I PD+++  T++N +C  G    A+ + ++
Sbjct: 538 VTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQ 597

Query: 399 MLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNN 458
           MLE G+  +  T   LI G+C++ +M  A E L  M+  G  P   SY+ L+DGY  + N
Sbjct: 598 MLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEAN 657

Query: 459 EEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTS 518
            E    L++E   RGL  ++  Y  ++  FC + K+  A+++   M   GI  D   Y+S
Sbjct: 658 LEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSS 717

Query: 519 LAYAYWRAGEPKACSDILDDMYRRRLM 545
           L   +      K      D+M +R L+
Sbjct: 718 LINGHVSQDNMKEAFRFHDEMLQRGLV 744



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 108/364 (29%), Positives = 194/364 (53%), Gaps = 2/364 (0%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           ++FD+M    ++P L + + L+  LA++         +++M + G+V +  +Y +LI   
Sbjct: 383 EIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGF 442

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           C++  +    K+  EM  +    D+ TYNT +   CKK M  +A  + + M   G+ PD 
Sbjct: 443 CRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDF 502

Query: 271 VTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
            T+ +LI G+C++G M +A  LF  +      P+ VTY TLIDG+C+A ++  A  L + 
Sbjct: 503 YTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDD 562

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M  K + P  ++Y ++L   C  G + +A  L ++M EK I P+ VTCNTLI  YC+ GD
Sbjct: 563 MIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGD 622

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
              A +  ++M+  G++ D F+Y  LI G+ K   ++ A  L+  M   G   +  +Y+ 
Sbjct: 623 MPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNL 682

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG 508
           +++G+C +   +   ++L + +  G+  D + Y +LI     ++ +  A R  + M   G
Sbjct: 683 ILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRG 742

Query: 509 ILGD 512
           ++ D
Sbjct: 743 LVPD 746



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 87/266 (32%), Positives = 146/266 (54%), Gaps = 2/266 (0%)

Query: 144 KMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLY 203
           KM  D   +F++M    ++P  +  T L+    KD   D    +++ MV+  +  +   Y
Sbjct: 481 KMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTY 540

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER 263
           N LI   CK+ ++ + ++L  +M  KD+  D  +Y T++  +C  G+  EAL + D+M  
Sbjct: 541 NTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLE 600

Query: 264 EGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEE 321
           +GI P++VT N+LI G+CR G M +A      +   G  P+  +Y TLIDGY +  +LE+
Sbjct: 601 KGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEK 660

Query: 322 ALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
           A  L   M  +G+   ++TYN IL   C EG++++A ++L +M E  I PD  T ++LIN
Sbjct: 661 AFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLIN 720

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLD 407
            +    +   A +  + ML+ GL+ D
Sbjct: 721 GHVSQDNMKEAFRFHDEMLQRGLVPD 746



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 84/312 (26%), Positives = 151/312 (48%), Gaps = 4/312 (1%)

Query: 271 VTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
           + Y+ L+  + +  ++RE    F+ +  KG + +      L+ G  R   ++ A  +   
Sbjct: 188 LIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGE 247

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           +   G+   V T N ++  LCK+ +  +    L++M  K +  D VT NTLINAYC+ G 
Sbjct: 248 VVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGL 307

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
              A ++ N     G+     TY A+++G CK  + D AK++L  ML  G +P+  +Y+ 
Sbjct: 308 VEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNT 367

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG 508
           L+   C ++N     ++ DE   RG+  D+  + +LI    +   +  A   F  M+ +G
Sbjct: 368 LLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSG 427

Query: 509 ILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI--LD 566
           I+ D+VIYT L   + R G       + D+M  R   + +  Y +F     K       D
Sbjct: 428 IVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADAD 487

Query: 567 LFWSHVVDRGLM 578
           + ++ +V+RG++
Sbjct: 488 MLFNEMVERGMV 499


>gi|297849270|ref|XP_002892516.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338358|gb|EFH68775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 607

 Score =  255 bits (651), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 151/498 (30%), Positives = 264/498 (53%), Gaps = 7/498 (1%)

Query: 33  NIASSLTSTAI-HKVLLNLYNCCHIPSLSC-AFFKWAESAVPNYKHSLQSHWTMIHILTK 90
           +I + L S ++ H V L   N   +P  S  AFFK+  S  P ++ ++++++ M   L  
Sbjct: 72  SIRNVLPSLSVRHVVDLINRNPLSLPHRSIFAFFKFISSQ-PEFRFTVETYFVMARFLAI 130

Query: 91  NKHFKSAQNMLEKIALRDFL-STPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDG 149
           ++ F  AQ+++E +  R    S  SV  +LV++   P  +  ++  L+I Y +L    D 
Sbjct: 131 HEMFVEAQSLIELVVSRKGKNSASSVFISLVEMRGTPMCD-FLVDALMITYMDLGFIPDV 189

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           +Q F   R HN +  +  C  LL+ + K   T  VW  Y +++  G   N++++N+L++ 
Sbjct: 190 IQCFRLSRKHNFVVPIRGCGNLLDRMMKLNPTGTVWGFYMEILDAGFPLNVYVFNILMNK 249

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
            CK  ++   +K+  E+  + +R  + ++NTLI  YCK G       ++  ME+    PD
Sbjct: 250 FCKEGNICDAQKVFDEITKRSLRPTVVSFNTLINGYCKVGNLDVGFRLKHHMEKSRTRPD 309

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLRE 327
           + TY++LI+  C+E +M  A RLF ++  +G  PN V +TTLI G+ R   ++      +
Sbjct: 310 VFTYSALINALCKENKMDGAHRLFYEMCERGLIPNDVIFTTLIHGHSRNGQIDLMKESYQ 369

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
            M +KG+ P +V YN+++   CK G +  A  +++ M  + + PD VT  TLI+ +C+ G
Sbjct: 370 KMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKVTYTTLIDGFCRGG 429

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
           D  +A++++  M + G+ LD+  + ALI G CK   +  A+  L  ML AG  P   +Y+
Sbjct: 430 DVDTALEIRKEMDQNGIELDRVGFSALICGMCKEGRVIDAERALREMLRAGMKPDDVTYT 489

Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGN 507
            ++D +C K + +   KLL E  S G   +V  Y  L+   CK  ++  A  L + M   
Sbjct: 490 MMMDAFCKKGDAQTGFKLLKEMQSDGHIPNVVTYNVLLNGLCKLGQMKNADMLLDAMLNV 549

Query: 508 GILGDSVIYTSLAYAYWR 525
           G++ D + Y +L   + R
Sbjct: 550 GVVPDDITYNTLLEGHHR 567



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 85/277 (30%), Positives = 151/277 (54%), Gaps = 2/277 (0%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEA 322
           G   ++  +N L++ FC+EG + +A+++F +I  +   P  V++ TLI+GYC+  +L+  
Sbjct: 235 GFPLNVYVFNILMNKFCKEGNICDAQKVFDEITKRSLRPTVVSFNTLINGYCKVGNLDVG 294

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            RL+  M      P V TY++++  LCKE ++  A+RL  EM E+ + P++V   TLI+ 
Sbjct: 295 FRLKHHMEKSRTRPDVFTYSALINALCKENKMDGAHRLFYEMCERGLIPNDVIFTTLIHG 354

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           + + G      +   +ML  GL  D   Y  L++GFCK  ++  A+ ++ GM+  G  P 
Sbjct: 355 HSRNGQIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPD 414

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ L+DG+C   + +  L++  E    G+ +D   + ALI   CK+ +V  A+R   
Sbjct: 415 KVTYTTLIDGFCRGGDVDTALEIRKEMDQNGIELDRVGFSALICGMCKEGRVIDAERALR 474

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
            M   G+  D V YT +  A+ + G+ +    +L +M
Sbjct: 475 EMLRAGMKPDDVTYTMMMDAFCKKGDAQTGFKLLKEM 511



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 88/275 (32%), Positives = 159/275 (57%), Gaps = 5/275 (1%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           ++F +M    L+P+    T L++  +++   D++ + Y+KM+  G+  +I LYN L++  
Sbjct: 331 RLFYEMCERGLIPNDVIFTTLIHGHSRNGQIDLMKESYQKMLSKGLQPDIVLYNTLVNGF 390

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           CK+ D+     ++  M  + +R D  TY TLI  +C+ G    AL ++  M++ GI  D 
Sbjct: 391 CKNGDLVAARNIVDGMIRRGLRPDKVTYTTLIDGFCRGGDVDTALEIRKEMDQNGIELDR 450

Query: 271 VTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
           V +++LI G C+EGR+ +A R  R++   G  P+ VTYT ++D +C+  D +   +L + 
Sbjct: 451 VGFSALICGMCKEGRVIDAERALREMLRAGMKPDDVTYTMMMDAFCKKGDAQTGFKLLKE 510

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M + G  P VVTYN +L  LCK G++++A+ LL+ M    + PD++T NTL+  + +  +
Sbjct: 511 MQSDGHIPNVVTYNVLLNGLCKLGQMKNADMLLDAMLNVGVVPDDITYNTLLEGHHRHAN 570

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
            +   K K    E G++ D  +YK+L++   +A +
Sbjct: 571 ASKHYKQKP---EIGIVADLASYKSLVNELYRASK 602



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 124/240 (51%), Gaps = 1/240 (0%)

Query: 327 EVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKI 386
           E++ A G    V  +N ++ K CKEG I DA ++ +E+ ++ + P  V+ NTLIN YCK+
Sbjct: 230 EILDA-GFPLNVYVFNILMNKFCKEGNICDAQKVFDEITKRSLRPTVVSFNTLINGYCKV 288

Query: 387 GDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSY 446
           G+     ++K+ M ++    D FTY ALI+  CK  +MD A  L + M + G  P+   +
Sbjct: 289 GNLDVGFRLKHHMEKSRTRPDVFTYSALINALCKENKMDGAHRLFYEMCERGLIPNDVIF 348

Query: 447 SWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQG 506
           + L+ G+      + + +   + +S+GL  D+ +Y  L+  FCK   +  A+ + + M  
Sbjct: 349 TTLIHGHSRNGQIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIR 408

Query: 507 NGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
            G+  D V YT+L   + R G+     +I  +M +  + +    + +      K+  ++D
Sbjct: 409 RGLRPDKVTYTTLIDGFCRGGDVDTALEIRKEMDQNGIELDRVGFSALICGMCKEGRVID 468



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 70/244 (28%), Positives = 117/244 (47%)

Query: 298 GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDA 357
           G   N   +  L++ +C+  ++ +A ++ + +  + + P VV++N+++   CK G +   
Sbjct: 235 GFPLNVYVFNILMNKFCKEGNICDAQKVFDEITKRSLRPTVVSFNTLINGYCKVGNLDVG 294

Query: 358 NRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHG 417
            RL + M + +  PD  T + LINA CK      A ++   M E GL+ +   +  LIHG
Sbjct: 295 FRLKHHMEKSRTRPDVFTYSALINALCKENKMDGAHRLFYEMCERGLIPNDVIFTTLIHG 354

Query: 418 FCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVD 477
             +  ++D+ KE    ML  G  P    Y+ LV+G+C   +  A   ++D  + RGL  D
Sbjct: 355 HSRNGQIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPD 414

Query: 478 VSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILD 537
              Y  LI  FC+   VD A  +   M  NGI  D V +++L     + G        L 
Sbjct: 415 KVTYTTLIDGFCRGGDVDTALEIRKEMDQNGIELDRVGFSALICGMCKEGRVIDAERALR 474

Query: 538 DMYR 541
           +M R
Sbjct: 475 EMLR 478



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 47/190 (24%), Positives = 90/190 (47%)

Query: 376 CNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGML 435
           C  L++   K+  T +       +L+AG  L+ + +  L++ FCK   +  A+++   + 
Sbjct: 208 CGNLLDRMMKLNPTGTVWGFYMEILDAGFPLNVYVFNILMNKFCKEGNICDAQKVFDEIT 267

Query: 436 DAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVD 495
                P+  S++ L++GYC   N +   +L           DV  Y ALI   CK+ K+D
Sbjct: 268 KRSLRPTVVSFNTLINGYCKVGNLDVGFRLKHHMEKSRTRPDVFTYSALINALCKENKMD 327

Query: 496 YAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFS 555
            A RLF  M   G++ + VI+T+L + + R G+     +    M  + L   + +Y +  
Sbjct: 328 GAHRLFYEMCERGLIPNDVIFTTLIHGHSRNGQIDLMKESYQKMLSKGLQPDIVLYNTLV 387

Query: 556 ASYAKDNEIL 565
             + K+ +++
Sbjct: 388 NGFCKNGDLV 397


>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  255 bits (651), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 144/517 (27%), Positives = 255/517 (49%), Gaps = 2/517 (0%)

Query: 50  LYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDF 109
           L+ C     L   F        PN+KHS  S   M+H L + +    AQ  + ++  +  
Sbjct: 107 LFRCRGDLHLGLKFIGLVSYHFPNFKHSSLSLSAMVHFLVRGRRLSEAQACILRMVRKSG 166

Query: 110 LSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACT 169
           +S   V+ +L+           +   LV  Y   K  ++G + F  +R   +   ++AC 
Sbjct: 167 VSRVKVVESLISTCFYFGSVGLIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACN 226

Query: 170 VLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFK 229
            LL  L +    D+ W++Y ++V+ G+  N++  N++++A CK    + V   L +ME K
Sbjct: 227 KLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGK 286

Query: 230 DVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA 289
            V AD+ TYNTLI  YC++G+  EA  + +     G+ P ++TYN++++G C+ G+   A
Sbjct: 287 GVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRA 346

Query: 290 RRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRK 347
           + +  ++   G TPN  TY TL+   CR +++ EA  + + M+ +GV P +V+++S++  
Sbjct: 347 KDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGV 406

Query: 348 LCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLD 407
           L + G +  A     EM    I PDNV    LI+ +C+ G  + A+K+++ ML  G  +D
Sbjct: 407 LARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMD 466

Query: 408 QFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLD 467
             TY   ++G CK K    A  L   M++ G  P + +++ L+ GYC   N +  L L +
Sbjct: 467 VVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFE 526

Query: 468 EFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
             V   L  D   Y  LI  FCK  ++  A+ L++ M    I+ D + Y ++   +  +G
Sbjct: 527 AMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSG 586

Query: 528 EPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
                 ++ D M  + +   L    +    Y +  ++
Sbjct: 587 LLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDM 623



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 133/447 (29%), Positives = 214/447 (47%), Gaps = 37/447 (8%)

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           L+  Y    + ++  Q+ +      + P L     +L  L K    D    V  +M+QLG
Sbjct: 298 LINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLG 357

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
           +  N   YN L+   C+  ++ + +++  EM  + V  DL ++++LI +  + G  Y+AL
Sbjct: 358 LTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQAL 417

Query: 256 AVQDRMEREGISPDIVTYNSLIHGFCREG------RMRE---ARRLFRDI---------- 296
                MER GI PD V Y  LI GFCR G      +MR+   AR  F D+          
Sbjct: 418 MHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGL 477

Query: 297 ------------------KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGV 338
                             +G  P+  T+TTLI GYC+  ++++AL L E M    + P  
Sbjct: 478 CKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDK 537

Query: 339 VTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNR 398
           VTYN+++   CK G +  A  L ++M  K I PD+++  T++N +C  G    A+ + ++
Sbjct: 538 VTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQ 597

Query: 399 MLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNN 458
           MLE G+  +  T   LI G+C++ +M  A E L  M+  G  P   SY+ L+DGY  + N
Sbjct: 598 MLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEAN 657

Query: 459 EEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTS 518
            E    L++E   RGL  ++  Y  ++  FC + K+  A+++   M   GI  D   Y+S
Sbjct: 658 LEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSS 717

Query: 519 LAYAYWRAGEPKACSDILDDMYRRRLM 545
           L   +      K      D+M +R L+
Sbjct: 718 LINGHVSQDNMKEAFRFHDEMLQRGLV 744



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 108/364 (29%), Positives = 194/364 (53%), Gaps = 2/364 (0%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           ++FD+M    ++P L + + L+  LA++         +++M + G+V +  +Y +LI   
Sbjct: 383 EIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGF 442

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           C++  +    K+  EM  +    D+ TYNT +   CKK M  +A  + + M   G+ PD 
Sbjct: 443 CRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDF 502

Query: 271 VTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
            T+ +LI G+C++G M +A  LF  +      P+ VTY TLIDG+C+A ++  A  L + 
Sbjct: 503 YTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDD 562

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M  K + P  ++Y ++L   C  G + +A  L ++M EK I P+ VTCNTLI  YC+ GD
Sbjct: 563 MIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGD 622

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
              A +  ++M+  G++ D F+Y  LI G+ K   ++ A  L+  M   G   +  +Y+ 
Sbjct: 623 MPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNL 682

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG 508
           +++G+C +   +   ++L + +  G+  D + Y +LI     ++ +  A R  + M   G
Sbjct: 683 ILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRG 742

Query: 509 ILGD 512
           ++ D
Sbjct: 743 LVPD 746



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 87/266 (32%), Positives = 146/266 (54%), Gaps = 2/266 (0%)

Query: 144 KMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLY 203
           KM  D   +F++M    ++P  +  T L+    KD   D    +++ MV+  +  +   Y
Sbjct: 481 KMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTY 540

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER 263
           N LI   CK+ ++ + ++L  +M  KD+  D  +Y T++  +C  G+  EAL + D+M  
Sbjct: 541 NTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLE 600

Query: 264 EGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEE 321
           +GI P++VT N+LI G+CR G M +A      +   G  P+  +Y TLIDGY +  +LE+
Sbjct: 601 KGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEK 660

Query: 322 ALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
           A  L   M  +G+   ++TYN IL   C EG++++A ++L +M E  I PD  T ++LIN
Sbjct: 661 AFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLIN 720

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLD 407
            +    +   A +  + ML+ GL+ D
Sbjct: 721 GHVSQDNMKEAFRFHDEMLQRGLVPD 746



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 84/312 (26%), Positives = 151/312 (48%), Gaps = 4/312 (1%)

Query: 271 VTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
           + Y+ L+  + +  ++RE    F+ +  KG + +      L+ G  R   ++ A  +   
Sbjct: 188 LIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGE 247

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           +   G+   V T N ++  LCK+ +  +    L++M  K +  D VT NTLINAYC+ G 
Sbjct: 248 VVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGL 307

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
              A ++ N     G+     TY A+++G CK  + D AK++L  ML  G +P+  +Y+ 
Sbjct: 308 VEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNT 367

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG 508
           L+   C ++N     ++ DE   RG+  D+  + +LI    +   +  A   F  M+ +G
Sbjct: 368 LLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSG 427

Query: 509 ILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI--LD 566
           I+ D+VIYT L   + R G       + D+M  R   + +  Y +F     K       D
Sbjct: 428 IVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADAD 487

Query: 567 LFWSHVVDRGLM 578
           + ++ +V+RG++
Sbjct: 488 MLFNEMVERGMV 499


>gi|224069254|ref|XP_002302938.1| predicted protein [Populus trichocarpa]
 gi|222844664|gb|EEE82211.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 141/474 (29%), Positives = 246/474 (51%), Gaps = 3/474 (0%)

Query: 57  PSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVL 116
           P    +FF +  S+ P + H++QS+ +M+H L  ++  + A+++L  +  R    + S +
Sbjct: 90  PKSLLSFFDFL-SSYPTFSHTVQSYCSMVHFLIAHRMNQQAESLLHFVVSRKGKGSASSV 148

Query: 117 NALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLA 176
            A +        +S V   L+  Y       D +Q F   + HNL    + C  LL  + 
Sbjct: 149 FASILETKGTLSSSFVFDALMSVYTEFGYVSDAIQCFRLTKKHNLKIPFNGCKCLLERMI 208

Query: 177 KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLF 236
           K     +  + Y +++  G   N++ +NVL++  CK   V   + +  E+    ++    
Sbjct: 209 KMSSPMVALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAV 268

Query: 237 TYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI 296
           ++NTLI  YCK G   E   ++  ME   + PD+ TY++LI G C+E ++ +A  LF+++
Sbjct: 269 SFNTLINGYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEM 328

Query: 297 --KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRI 354
             +G  PN VT+TTLI+G C+   ++ AL + + M  KG+   +V YN+++  LCK G  
Sbjct: 329 CDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYF 388

Query: 355 RDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKAL 414
           R+A + + EM ++ + PD  T  TL++  CK GD   A++++  M++ G+ LD   + A+
Sbjct: 389 REARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAI 448

Query: 415 IHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGL 474
           I G C+  ++  A+  L  ML AG  P   +Y+ ++DG+C K + +   KLL E  S G 
Sbjct: 449 ISGLCRDGKIVDAERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGH 508

Query: 475 CVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
              V  Y  L+   CK+ +V  A  L N M   G++ D + Y  L   + + G+
Sbjct: 509 IPGVITYNVLMNGLCKQGQVKNADMLLNAMLNLGVVPDDITYNILLQGHCKHGK 562



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 95/279 (34%), Positives = 158/279 (56%), Gaps = 5/279 (1%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           +D   +F +M    L+P+    T L+N   K+   D+  ++Y++M   G+ A++ LYN L
Sbjct: 319 EDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTL 378

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           I   CK     +  K + EM  + +  D FTY TL+   CK+G    AL ++  M +EGI
Sbjct: 379 IDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGI 438

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
             D V + ++I G CR+G++ +A R  R++   G  P+  TYT ++DG+C+  D++   +
Sbjct: 439 QLDNVAFTAIISGLCRDGKIVDAERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFK 498

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           L + M + G  PGV+TYN ++  LCK+G++++A+ LLN M    + PD++T N L+  +C
Sbjct: 499 LLKEMQSDGHIPGVITYNVLMNGLCKQGQVKNADMLLNAMLNLGVVPDDITYNILLQGHC 558

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
           K G       VK  M   GL+ D  +Y++L+H   KA +
Sbjct: 559 KHGKLGDFQNVKTEM---GLVSDYASYRSLLHELSKASK 594



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 93/277 (33%), Positives = 154/277 (55%), Gaps = 2/277 (0%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           G  P++ T+N L++  C+EG++++A+ +F +I+  G  P  V++ TLI+GYC++ +LEE 
Sbjct: 227 GYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGYCKSGNLEEG 286

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            RL+ VM    V+P V TY++++  LCKE ++ DAN L  EM ++ + P++VT  TLIN 
Sbjct: 287 FRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLING 346

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
            CK G    A+++  +M   GL  D   Y  LI G CK      A++ +  M   G  P 
Sbjct: 347 QCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPD 406

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ L+DG C + + E  L++  E V  G+ +D   + A+I   C+  K+  A+R   
Sbjct: 407 KFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLR 466

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
            M   G+  D   YT +   + + G+ K    +L +M
Sbjct: 467 EMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEM 503



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 83/329 (25%), Positives = 152/329 (46%), Gaps = 16/329 (4%)

Query: 247 KKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGATPNHVTY 306
           +KG    +      +E +G       +++L+  +   G + +A + FR     T  H   
Sbjct: 139 RKGKGSASSVFASILETKGTLSSSFVFDALMSVYTEFGYVSDAIQCFR----LTKKHNLK 194

Query: 307 TTLIDGYCRANDLEEALRLREVMAA---------KGVYPGVVTYNSILRKLCKEGRIRDA 357
                  C    LE  +++   M A          G  P V T+N ++ +LCKEG+++DA
Sbjct: 195 IPFNGCKCL---LERMIKMSSPMVALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDA 251

Query: 358 NRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHG 417
             + +E+ +  + P  V+ NTLIN YCK G+     ++K  M E  +  D FTY ALI G
Sbjct: 252 QLIFDEIRKTGLQPTAVSFNTLINGYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDG 311

Query: 418 FCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVD 477
            CK  +++ A  L   M D G  P+  +++ L++G C     +  L++  +  ++GL  D
Sbjct: 312 LCKECQLEDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKAD 371

Query: 478 VSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILD 537
           + +Y  LI   CK      A++    M   G++ D   YT+L     + G+ +   ++  
Sbjct: 372 LVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRK 431

Query: 538 DMYRRRLMITLKIYRSFSASYAKDNEILD 566
           +M +  + +    + +  +   +D +I+D
Sbjct: 432 EMVKEGIQLDNVAFTAIISGLCRDGKIVD 460



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 78/321 (24%), Positives = 140/321 (43%), Gaps = 2/321 (0%)

Query: 226 MEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGR 285
           +E K   +  F ++ L+++Y + G   +A+      ++  +         L+    +   
Sbjct: 153 LETKGTLSSSFVFDALMSVYTEFGYVSDAIQCFRLTKKHNLKIPFNGCKCLLERMIKMSS 212

Query: 286 MREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNS 343
              A   + +I   G  PN  T+  L++  C+   +++A  + + +   G+ P  V++N+
Sbjct: 213 PMVALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNT 272

Query: 344 ILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAG 403
           ++   CK G + +  RL   M E ++ PD  T + LI+  CK      A  +   M + G
Sbjct: 273 LINGYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRG 332

Query: 404 LMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALL 463
           L+ +  T+  LI+G CK   +D+A E+   M   G       Y+ L+DG C         
Sbjct: 333 LVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREAR 392

Query: 464 KLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAY 523
           K + E   RGL  D   Y  L+   CK+  ++ A  +   M   GI  D+V +T++    
Sbjct: 393 KFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGL 452

Query: 524 WRAGEPKACSDILDDMYRRRL 544
            R G+       L +M R  L
Sbjct: 453 CRDGKIVDAERTLREMLRAGL 473



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 99/203 (48%), Gaps = 5/203 (2%)

Query: 155 QMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSS 214
           +M    L+P     T LL+   K+   ++  ++ K+MV+ G+  +   +  +I   C+  
Sbjct: 397 EMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDG 456

Query: 215 DVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYN 274
            +   E+ L EM    ++ D  TY  ++  +CKKG       +   M+ +G  P ++TYN
Sbjct: 457 KIVDAERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYN 516

Query: 275 SLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAK 332
            L++G C++G+++ A  L   +   G  P+ +TY  L+ G+C+   L +    + V    
Sbjct: 517 VLMNGLCKQGQVKNADMLLNAMLNLGVVPDDITYNILLQGHCKHGKLGD---FQNVKTEM 573

Query: 333 GVYPGVVTYNSILRKLCKEGRIR 355
           G+     +Y S+L +L K  + R
Sbjct: 574 GLVSDYASYRSLLHELSKASKDR 596



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 57/246 (23%), Positives = 112/246 (45%), Gaps = 24/246 (9%)

Query: 75  KHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLS 134
           K  L  + T+I  L K  +F+ A+  + ++  R  +        L+      DG+     
Sbjct: 369 KADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLL------DGSCKEGD 422

Query: 135 WLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQL 194
             +      +M ++G+Q+ D +          A T +++ L +D       +  ++M++ 
Sbjct: 423 LELALEMRKEMVKEGIQL-DNV----------AFTAIISGLCRDGKIVDAERTLREMLRA 471

Query: 195 GVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEA 254
           G+  +   Y +++   CK  DV    KLL EM+       + TYN L+   CK+G    A
Sbjct: 472 GLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYNVLMNGLCKQGQVKNA 531

Query: 255 LAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK---GATPNHVTYTTLID 311
             + + M   G+ PD +TYN L+ G C+ G++ +    F+++K   G   ++ +Y +L+ 
Sbjct: 532 DMLLNAMLNLGVVPDDITYNILLQGHCKHGKLGD----FQNVKTEMGLVSDYASYRSLLH 587

Query: 312 GYCRAN 317
              +A+
Sbjct: 588 ELSKAS 593



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 64/143 (44%), Gaps = 3/143 (2%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D  +   +M    L P     T++++   K     M +K+ K+M   G +  +  YNVL+
Sbjct: 460 DAERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYNVLM 519

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           +  CK   V   + LL  M    V  D  TYN L+  +CK G   +   V+  M   G+ 
Sbjct: 520 NGLCKQGQVKNADMLLNAMLNLGVVPDDITYNILLQGHCKHGKLGDFQNVKTEM---GLV 576

Query: 268 PDIVTYNSLIHGFCREGRMREAR 290
            D  +Y SL+H   +  + R+ R
Sbjct: 577 SDYASYRSLLHELSKASKDRQKR 599


>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Glycine max]
          Length = 583

 Score =  253 bits (647), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 159/543 (29%), Positives = 276/543 (50%), Gaps = 46/543 (8%)

Query: 14  IKTISAIMLKGHWAKLLNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPN 73
           I TIS ++   HW++L  P+  +  T  AI   L  L+N      L   FF+W++     
Sbjct: 20  ISTISELLSNQHWSEL-KPHFRT--TKPAI--FLDQLFNAGVDSELVLRFFQWSQKEF-R 73

Query: 74  YKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVL 133
             + L++   ++H+L  +K +   ++ L+K+   +  +  SV ++L+   D P  N+ + 
Sbjct: 74  ISYGLETTGKVLHLLANSKKYSKVRSFLDKLVKNEKHTVSSVFHSLLLGGDRPCANALIT 133

Query: 134 SWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQ 193
             LV+ Y          +VF +++ +     L++C  LL++L K   T  +  VYK+M++
Sbjct: 134 DMLVLAYVTNLEIHSACEVFRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQYVYKEMIK 193

Query: 194 LGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMH-- 251
             +  N+  +N+ I+  CK+  ++K E ++ +++      ++ TYNTLI  +CKKG    
Sbjct: 194 RRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGK 253

Query: 252 -YEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTT 308
            Y A A+   M    I P+ +T+N+LI GFC++  +  A+  F ++  +G  PN VTY +
Sbjct: 254 MYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNS 313

Query: 309 LIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKK 368
           LI+G      L+EA+ L + M   G+ P +VT+N+++   CK+  I++A +L +++ E+ 
Sbjct: 314 LINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQD 373

Query: 369 IAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAG------------------------- 403
           + P+ +T NT+I+A+CK G       + N ML+ G                         
Sbjct: 374 LVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAK 433

Query: 404 ----------LMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGY 453
                     L  D  TY  LI G+CK  E   A++LL  ML+ G  P++ +Y+ L+DGY
Sbjct: 434 KLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGY 493

Query: 454 CNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDS 513
           C + N +A LK+  +    G   +V  Y  LI+ FCK  K++ A RL N M   G+  + 
Sbjct: 494 CMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNR 553

Query: 514 VIY 516
             Y
Sbjct: 554 TTY 556



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 83/294 (28%), Positives = 151/294 (51%), Gaps = 20/294 (6%)

Query: 83  TMIHILTKNKHFKSAQNMLEKI-------------ALRDFLSTPSVLNALVKIHDDPDG- 128
           T+I    K+++  +A+N  E++             +L + LS    L+  + + D   G 
Sbjct: 278 TLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGL 337

Query: 129 ----NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMV 184
               N    + L+  +   KM ++  ++FD +   +L+P+      ++++  K  + +  
Sbjct: 338 GLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEG 397

Query: 185 WKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIAL 244
           + ++  M+  G+  N+  YN LI   C++ +V   +KLL EME  +++AD+ TYN LI  
Sbjct: 398 FALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGG 457

Query: 245 YCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPN 302
           +CK G   +A  +   M   G+ P+ VTYN+L+ G+C EG ++ A ++   ++  G   N
Sbjct: 458 WCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRAN 517

Query: 303 HVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRD 356
            VTY  LI G+C+   LE+A RL   M  KG+ P   TY+ +  ++ ++G I D
Sbjct: 518 VVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTYDVVRLEMLEKGFIPD 571


>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 146/489 (29%), Positives = 251/489 (51%), Gaps = 7/489 (1%)

Query: 58  SLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLST-PSVL 116
           SL   F  WA S       S Q     +HILT+ K +K+AQ++ E++ +     T   + 
Sbjct: 62  SLVLKFLDWARS---QQFFSFQCKCLALHILTRYKLYKTAQSLAEEVVVNTVDETGEDLF 118

Query: 117 NALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLA 176
             L   +     +S V   +V   A + +    L + +  + +  MP + +   +L+++ 
Sbjct: 119 QCLKNSYYQCKSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVI 178

Query: 177 KDRLT-DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADL 235
           + + +  +   ++K+MV+ GV  N++ YN+LI   C + +++       EME      ++
Sbjct: 179 RTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNV 238

Query: 236 FTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD 295
            TYNT+I  YCK     EA  +   M  +G++P++++YN +I+G CREG+M+E   +  +
Sbjct: 239 VTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEE 298

Query: 296 I--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGR 353
           +  +   P+ VT+ TLI+GYC   +  +AL L   M   G+ P VVTY +++  +CK G 
Sbjct: 299 MSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGN 358

Query: 354 IRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKA 413
           +  A   L++M ++ + P+  T  TLI+ + + G    A ++   M+E G      TY A
Sbjct: 359 LNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNA 418

Query: 414 LIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
           LI+G C    M+ A  LL  M++ GF P   SYS ++ G+C     E   +L  E V++G
Sbjct: 419 LINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKG 478

Query: 474 LCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACS 533
           +  DV+ Y +LI+  CK+ ++     LF  M   G+  D V YTSL  AY   G+     
Sbjct: 479 ISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKAL 538

Query: 534 DILDDMYRR 542
            + D+M ++
Sbjct: 539 RLHDEMIQK 547



 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 115/363 (31%), Positives = 196/363 (53%), Gaps = 5/363 (1%)

Query: 141 ANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANI 200
            NL+M   GL  F +M  +  +P++     ++++  K R     +K+ + M   G+  N+
Sbjct: 217 GNLEM---GLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNL 273

Query: 201 HLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDR 260
             YNV+I+  C+   + +  ++L EM  +    D  T+NTLI  YC  G  ++AL +   
Sbjct: 274 ISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAE 333

Query: 261 MEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRAND 318
           M + G+SP++VTY +LI+  C+ G +  A      ++  G  PN  TYTTLIDG+ +   
Sbjct: 334 MVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGF 393

Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT 378
           L++A ++ + M   G  P ++TYN+++   C  GR+ DA+ LL EM E+   PD V+ +T
Sbjct: 394 LKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYST 453

Query: 379 LINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAG 438
           +I+ +C+  +   A ++K  M+  G+  D  TY +LI G CK + +    +L   ML  G
Sbjct: 454 IISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLG 513

Query: 439 FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQ 498
             P   +Y+ L++ YC + + +  L+L DE + +G   D+  Y  LI  F K+ +   A+
Sbjct: 514 LPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAK 573

Query: 499 RLF 501
           RL 
Sbjct: 574 RLL 576



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 130/451 (28%), Positives = 226/451 (50%), Gaps = 27/451 (5%)

Query: 129 NSHVLSWLVIFYANLKMTQ--DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWK 186
           N +++S+ V+     +  Q  +  ++ ++M     +P       L+N             
Sbjct: 270 NPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALV 329

Query: 187 VYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYC 246
           ++ +MV+ G+  N+  Y  LI++ CK+ ++++  + L +M  + +  +  TY TLI  + 
Sbjct: 330 LHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFS 389

Query: 247 KKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHV 304
           ++G   +A  +   M   G +P I+TYN+LI+G C  GRM +A  L +++  +G  P+ V
Sbjct: 390 QQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVV 449

Query: 305 TYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM 364
           +Y+T+I G+CR  +LE+A +L+  M AKG+ P V TY+S+++ LCK+ R+ +   L  EM
Sbjct: 450 SYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEM 509

Query: 365 NEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEM 424
               + PD VT  +LINAYC  GD   A+++ + M++ G   D  TY  LI+GF K    
Sbjct: 510 LSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRT 569

Query: 425 DIAKELLFGMLDAGFSPSYCSYSWLVD---------------GYCNKNNEEALLKLLDEF 469
             AK LL  +L     P+  +Y+ L+D               G+C K       ++L+  
Sbjct: 570 KEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESM 629

Query: 470 VSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEP 529
           + +G  ++  VY  +I    K   ++ A  L+  M  +G    SV   +LA + +  G+ 
Sbjct: 630 LQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKE 689

Query: 530 KACSDILDDMYRRRLMITLKIYRSFSASYAK 560
              + +LD         TLK  R   A+ AK
Sbjct: 690 VELNQLLD--------YTLKSCRITEAALAK 712



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 108/373 (28%), Positives = 193/373 (51%), Gaps = 6/373 (1%)

Query: 202 LYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLI-ALYCKKGMHYEALAVQDR 260
           ++++++ +C + + ++K   ++   +       + +YN ++ A+   K     A  +   
Sbjct: 134 VFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKE 193

Query: 261 MEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRAND 318
           M   G+SP++ TYN LI GFC  G +      F +++  G  PN VTY T+ID YC+   
Sbjct: 194 MVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRK 253

Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT 378
           + EA +L  +MA KG+ P +++YN ++  LC+EG++++ + +L EM++++  PD VT NT
Sbjct: 254 IGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNT 313

Query: 379 LINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAG 438
           LIN YC +G+   A+ +   M++ GL  +  TY  LI+  CKA  ++ A E L  M D G
Sbjct: 314 LINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRG 373

Query: 439 FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQ 498
             P+  +Y+ L+DG+  +   +   +++ E V  G    +  Y ALI   C   +++ A 
Sbjct: 374 LHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDAS 433

Query: 499 RLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASY 558
            L   M   G + D V Y+++   + R  E +    +  +M  + +   +  Y S     
Sbjct: 434 GLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGL 493

Query: 559 AKD---NEILDLF 568
            K     E+ DLF
Sbjct: 494 CKQRRLGEVCDLF 506



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 140/509 (27%), Positives = 242/509 (47%), Gaps = 39/509 (7%)

Query: 38  LTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSA 97
           L +   +  +++ Y  C +  +  AF      A+     +L S+  +I+ L +    K  
Sbjct: 235 LPNVVTYNTIIDAY--CKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKET 292

Query: 98  QNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHV------------LSWLVIFYANL-- 143
             +LE+++ R ++      N L+  + +  GN H             LS  V+ Y  L  
Sbjct: 293 SEILEEMSKRRYVPDRVTFNTLINGYCNV-GNFHQALVLHAEMVKNGLSPNVVTYTTLIN 351

Query: 144 KMTQDG-----LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVA 198
            M + G     ++  DQMR   L P+    T L++  ++       +++ K+MV+ G   
Sbjct: 352 SMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTP 411

Query: 199 NIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQ 258
            I  YN LI+  C    ++    LL EM  +    D+ +Y+T+I+ +C+     +A  ++
Sbjct: 412 TIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLK 471

Query: 259 DRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRA 316
             M  +GISPD+ TY+SLI G C++ R+ E   LF+++   G  P+ VTYT+LI+ YC  
Sbjct: 472 VEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIE 531

Query: 317 NDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTC 376
            DL++ALRL + M  KG  P +VTYN ++    K+ R ++A RLL ++  ++  P+ +T 
Sbjct: 532 GDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITY 591

Query: 377 NTLIN---------------AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKA 421
           NTLI+                +C  G    A +V   ML+ G  L++  Y  +IHG  K 
Sbjct: 592 NTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKV 651

Query: 422 KEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVY 481
             ++ A  L   ML +GF+P   +   L     ++  E  L +LLD  +      + ++ 
Sbjct: 652 GNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQLLDYTLKSCRITEAALA 711

Query: 482 RALIRRFCKKEKVDYAQRLFNLMQGNGIL 510
           + LI    K+  +D    +   M  +G+L
Sbjct: 712 KVLIGINSKEGNMDAVFNVLKDMALSGLL 740



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 101/380 (26%), Positives = 169/380 (44%), Gaps = 34/380 (8%)

Query: 79  QSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVI 138
           +++ T+I   ++    K A  +++++    F  T    NAL+        N H +     
Sbjct: 379 RTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALI--------NGHCI----- 425

Query: 139 FYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVA 198
               L   +D   +  +M     +P + + + +++   +++  +  +++  +MV  G+  
Sbjct: 426 ----LGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISP 481

Query: 199 NIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQ 258
           ++  Y+ LI   CK   + +V  L  EM    +  D  TY +LI  YC +G   +AL + 
Sbjct: 482 DVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLH 541

Query: 259 DRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLID----- 311
           D M ++G SPDIVTYN LI+GF ++ R +EA+RL   +  + + PN +TY TLID     
Sbjct: 542 DEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNL 601

Query: 312 ----------GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLL 361
                     G+C    + EA R+ E M  KG       YN I+    K G I  A  L 
Sbjct: 602 EFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLY 661

Query: 362 NEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKA 421
            EM     AP +VT   L  +    G      ++ +  L++  + +    K LI    K 
Sbjct: 662 KEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQLLDYTLKSCRITEAALAKVLIGINSKE 721

Query: 422 KEMDIAKELLFGMLDAGFSP 441
             MD    +L  M  +G  P
Sbjct: 722 GNMDAVFNVLKDMALSGLLP 741


>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 146/489 (29%), Positives = 251/489 (51%), Gaps = 7/489 (1%)

Query: 58  SLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLST-PSVL 116
           SL   F  WA S       S Q     +HILT+ K +K+AQ++ E++ +     T   + 
Sbjct: 62  SLVLKFLDWARS---QQFFSFQCKCLALHILTRYKLYKTAQSLAEEVVVNTVDETGEDLF 118

Query: 117 NALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLA 176
             L   +     +S V   +V   A + +    L + +  + +  MP + +   +L+++ 
Sbjct: 119 QCLKNSYYQCKSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVI 178

Query: 177 KDRLT-DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADL 235
           + + +  +   ++K+MV+ GV  N++ YN+LI   C + +++       EME      ++
Sbjct: 179 RTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNV 238

Query: 236 FTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD 295
            TYNT+I  YCK     EA  +   M  +G++P++++YN +I+G CREG+M+E   +  +
Sbjct: 239 VTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEE 298

Query: 296 I--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGR 353
           +  +   P+ VT+ TLI+GYC   +  +AL L   M   G+ P VVTY +++  +CK G 
Sbjct: 299 MSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGN 358

Query: 354 IRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKA 413
           +  A   L++M ++ + P+  T  TLI+ + + G    A ++   M+E G      TY A
Sbjct: 359 LNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNA 418

Query: 414 LIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
           LI+G C    M+ A  LL  M++ GF P   SYS ++ G+C     E   +L  E V++G
Sbjct: 419 LINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKG 478

Query: 474 LCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACS 533
           +  DV+ Y +LI+  CK+ ++     LF  M   G+  D V YTSL  AY   G+     
Sbjct: 479 ISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKAL 538

Query: 534 DILDDMYRR 542
            + D+M ++
Sbjct: 539 RLHDEMIQK 547



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 115/363 (31%), Positives = 196/363 (53%), Gaps = 5/363 (1%)

Query: 141 ANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANI 200
            NL+M   GL  F +M  +  +P++     ++++  K R     +K+ + M   G+  N+
Sbjct: 217 GNLEM---GLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNL 273

Query: 201 HLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDR 260
             YNV+I+  C+   + +  ++L EM  +    D  T+NTLI  YC  G  ++AL +   
Sbjct: 274 ISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAE 333

Query: 261 MEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRAND 318
           M + G+SP++VTY +LI+  C+ G +  A      ++  G  PN  TYTTLIDG+ +   
Sbjct: 334 MVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGF 393

Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT 378
           L++A ++ + M   G  P ++TYN+++   C  GR+ DA+ LL EM E+   PD V+ +T
Sbjct: 394 LKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYST 453

Query: 379 LINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAG 438
           +I+ +C+  +   A ++K  M+  G+  D  TY +LI G CK + +    +L   ML  G
Sbjct: 454 IISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLG 513

Query: 439 FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQ 498
             P   +Y+ L++ YC + + +  L+L DE + +G   D+  Y  LI  F K+ +   A+
Sbjct: 514 LPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAK 573

Query: 499 RLF 501
           RL 
Sbjct: 574 RLL 576



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 130/451 (28%), Positives = 226/451 (50%), Gaps = 27/451 (5%)

Query: 129 NSHVLSWLVIFYANLKMTQ--DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWK 186
           N +++S+ V+     +  Q  +  ++ ++M     +P       L+N             
Sbjct: 270 NPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALV 329

Query: 187 VYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYC 246
           ++ +MV+ G+  N+  Y  LI++ CK+ ++++  + L +M  + +  +  TY TLI  + 
Sbjct: 330 LHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFS 389

Query: 247 KKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHV 304
           ++G   +A  +   M   G +P I+TYN+LI+G C  GRM +A  L +++  +G  P+ V
Sbjct: 390 QQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVV 449

Query: 305 TYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM 364
           +Y+T+I G+CR  +LE+A +L+  M AKG+ P V TY+S+++ LCK+ R+ +   L  EM
Sbjct: 450 SYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEM 509

Query: 365 NEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEM 424
               + PD VT  +LINAYC  GD   A+++ + M++ G   D  TY  LI+GF K    
Sbjct: 510 LSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRT 569

Query: 425 DIAKELLFGMLDAGFSPSYCSYSWLVD---------------GYCNKNNEEALLKLLDEF 469
             AK LL  +L     P+  +Y+ L+D               G+C K       ++L+  
Sbjct: 570 KEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESM 629

Query: 470 VSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEP 529
           + +G  ++  VY  +I    K   ++ A  L+  M  +G    SV   +LA + +  G+ 
Sbjct: 630 LQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKE 689

Query: 530 KACSDILDDMYRRRLMITLKIYRSFSASYAK 560
              + +LD         TLK  R   A+ AK
Sbjct: 690 VELNQLLD--------YTLKSCRITEAALAK 712



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 108/373 (28%), Positives = 193/373 (51%), Gaps = 6/373 (1%)

Query: 202 LYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLI-ALYCKKGMHYEALAVQDR 260
           ++++++ +C + + ++K   ++   +       + +YN ++ A+   K     A  +   
Sbjct: 134 VFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKE 193

Query: 261 MEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRAND 318
           M   G+SP++ TYN LI GFC  G +      F +++  G  PN VTY T+ID YC+   
Sbjct: 194 MVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRK 253

Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT 378
           + EA +L  +MA KG+ P +++YN ++  LC+EG++++ + +L EM++++  PD VT NT
Sbjct: 254 IGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNT 313

Query: 379 LINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAG 438
           LIN YC +G+   A+ +   M++ GL  +  TY  LI+  CKA  ++ A E L  M D G
Sbjct: 314 LINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRG 373

Query: 439 FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQ 498
             P+  +Y+ L+DG+  +   +   +++ E V  G    +  Y ALI   C   +++ A 
Sbjct: 374 LHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDAS 433

Query: 499 RLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASY 558
            L   M   G + D V Y+++   + R  E +    +  +M  + +   +  Y S     
Sbjct: 434 GLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGL 493

Query: 559 AKD---NEILDLF 568
            K     E+ DLF
Sbjct: 494 CKQRRLGEVCDLF 506



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 140/509 (27%), Positives = 242/509 (47%), Gaps = 39/509 (7%)

Query: 38  LTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSA 97
           L +   +  +++ Y  C +  +  AF      A+     +L S+  +I+ L +    K  
Sbjct: 235 LPNVVTYNTIIDAY--CKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKET 292

Query: 98  QNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHV------------LSWLVIFYANL-- 143
             +LE+++ R ++      N L+  + +  GN H             LS  V+ Y  L  
Sbjct: 293 SEILEEMSKRRYVPDRVTFNTLINGYCNV-GNFHQALVLHAEMVKNGLSPNVVTYTTLIN 351

Query: 144 KMTQDG-----LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVA 198
            M + G     ++  DQMR   L P+    T L++  ++       +++ K+MV+ G   
Sbjct: 352 SMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTP 411

Query: 199 NIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQ 258
            I  YN LI+  C    ++    LL EM  +    D+ +Y+T+I+ +C+     +A  ++
Sbjct: 412 TIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLK 471

Query: 259 DRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRA 316
             M  +GISPD+ TY+SLI G C++ R+ E   LF+++   G  P+ VTYT+LI+ YC  
Sbjct: 472 VEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIE 531

Query: 317 NDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTC 376
            DL++ALRL + M  KG  P +VTYN ++    K+ R ++A RLL ++  ++  P+ +T 
Sbjct: 532 GDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITY 591

Query: 377 NTLIN---------------AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKA 421
           NTLI+                +C  G    A +V   ML+ G  L++  Y  +IHG  K 
Sbjct: 592 NTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKV 651

Query: 422 KEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVY 481
             ++ A  L   ML +GF+P   +   L     ++  E  L +LLD  +      + ++ 
Sbjct: 652 GNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQLLDYTLKSCRITEAALA 711

Query: 482 RALIRRFCKKEKVDYAQRLFNLMQGNGIL 510
           + LI    K+  +D    +   M  +G+L
Sbjct: 712 KVLIGINSKEGNMDAVFNVLKDMALSGLL 740



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 101/380 (26%), Positives = 169/380 (44%), Gaps = 34/380 (8%)

Query: 79  QSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVI 138
           +++ T+I   ++    K A  +++++    F  T    NAL+        N H +     
Sbjct: 379 RTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALI--------NGHCI----- 425

Query: 139 FYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVA 198
               L   +D   +  +M     +P + + + +++   +++  +  +++  +MV  G+  
Sbjct: 426 ----LGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISP 481

Query: 199 NIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQ 258
           ++  Y+ LI   CK   + +V  L  EM    +  D  TY +LI  YC +G   +AL + 
Sbjct: 482 DVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLH 541

Query: 259 DRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLID----- 311
           D M ++G SPDIVTYN LI+GF ++ R +EA+RL   +  + + PN +TY TLID     
Sbjct: 542 DEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNL 601

Query: 312 ----------GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLL 361
                     G+C    + EA R+ E M  KG       YN I+    K G I  A  L 
Sbjct: 602 EFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLY 661

Query: 362 NEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKA 421
            EM     AP +VT   L  +    G      ++ +  L++  + +    K LI    K 
Sbjct: 662 KEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQLLDYTLKSCRITEAALAKVLIGINSKE 721

Query: 422 KEMDIAKELLFGMLDAGFSP 441
             MD    +L  M  +G  P
Sbjct: 722 GNMDAVFNVLKDMALSGLLP 741


>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
          Length = 589

 Score =  252 bits (643), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 139/477 (29%), Positives = 249/477 (52%), Gaps = 4/477 (0%)

Query: 110 LSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACT 169
           +S   ++ +LV  + +   N  V   LV  Y   +  ++G + F  ++   L   ++AC 
Sbjct: 7   VSRVEIVESLVLTYGNCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACN 66

Query: 170 VLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFK 229
            LL  L K    D+ W++Y+++V+ GV  N++  N++I+A CK+  ++  +  L +ME K
Sbjct: 67  SLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEK 126

Query: 230 DVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA 289
            V  D+ TYNTLI  YC++G+  EA  + D M  +G+ P + TYN++I+G C+ G+   A
Sbjct: 127 GVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRA 186

Query: 290 RRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRK 347
           + +  ++   G +P+  TY  L+   CR +++ +A R+ + M ++GV P +V++++++  
Sbjct: 187 KGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGL 246

Query: 348 LCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLD 407
           L K G +  A +   +M    +APDNV    LI  +C+ G  + A+KV++ MLE G +LD
Sbjct: 247 LSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLD 306

Query: 408 QFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLD 467
             TY  +++G CK K +  A EL   M + G  P + +++ L++GY    N    + L +
Sbjct: 307 VVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFE 366

Query: 468 EFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
             + R L  DV  Y  LI  FCK  +++    L+N M    I  + + Y  L   Y   G
Sbjct: 367 MMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMG 426

Query: 528 EPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEIL--DLFWSHVVDRGLMSKHI 582
                  + D+M  +    T+    +    Y +    +  D F S+++ +G++   I
Sbjct: 427 CVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGI 483



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 135/508 (26%), Positives = 236/508 (46%), Gaps = 29/508 (5%)

Query: 84  MIHILTKNKHFKSAQNML----EKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIF 139
           MI+ L KN+  ++ ++ L    EK    D ++  +++NA                     
Sbjct: 103 MINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINA--------------------- 141

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
           Y    + ++  ++ D M    L P +     ++N L K         V  +M+++G+  +
Sbjct: 142 YCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPD 201

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
              YN+L+  CC++ ++   E++  EM  + V  DL +++ LI L  K G   +AL    
Sbjct: 202 TATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFR 261

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRAN 317
            M+  G++PD V Y  LI GFCR G M EA ++  ++  +G   + VTY T+++G C+  
Sbjct: 262 DMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEK 321

Query: 318 DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCN 377
            L EA  L   M  +GV+P   T+ +++    K+G +  A  L   M ++ + PD VT N
Sbjct: 322 MLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYN 381

Query: 378 TLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA 437
           TLI+ +CK  +     ++ N M+   +  +  +Y  LI+G+C    +  A  L   M++ 
Sbjct: 382 TLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEK 441

Query: 438 GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYA 497
           GF  +  + + +V GYC   N     + L   + +G+  D   Y  LI  F K+E +D A
Sbjct: 442 GFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRA 501

Query: 498 QRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSAS 557
             L N M+ +G+L D + Y  +   + R G  +    I+  M  R +      Y S    
Sbjct: 502 FALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLING 561

Query: 558 YAKDNEILDLFWSH--VVDRGLMSKHIF 583
           +   N + + F  H  ++ RG +    F
Sbjct: 562 HVTQNNLKEAFRVHDEMLQRGFVPDDKF 589



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 97/391 (24%), Positives = 171/391 (43%), Gaps = 63/391 (16%)

Query: 41  TAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKN-------KH 93
           TA + +LL    CC   ++  A   + E         L S   +I +L+KN       K+
Sbjct: 202 TATYNILL--VECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKY 259

Query: 94  FK-------SAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANL--- 143
           F+       +  N++  I +  F     V++  +K+ D+      VL   V+ Y  +   
Sbjct: 260 FRDMKNAGLAPDNVIYTILIGGFCRN-GVMSEALKVRDEMLEQGCVLD--VVTYNTILNG 316

Query: 144 ----KMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
               KM  +  ++F +M    + P  +  T L+N  +KD   +    +++ M+Q  +  +
Sbjct: 317 LCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPD 376

Query: 200 IHLYNVLIHACCKSSDVDKVEKL----------------------LC------------- 224
           +  YN LI   CK S+++KV +L                       C             
Sbjct: 377 VVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWD 436

Query: 225 EMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREG 284
           EM  K   A + T NT++  YC+ G   +A      M  +GI PD +TYN+LI+GF +E 
Sbjct: 437 EMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEE 496

Query: 285 RMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYN 342
            M  A  L   ++  G  P+ +TY  +++G+ R   ++EA  +   M  +GV P   TY 
Sbjct: 497 NMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYT 556

Query: 343 SILRKLCKEGRIRDANRLLNEMNEKKIAPDN 373
           S++     +  +++A R+ +EM ++   PD+
Sbjct: 557 SLINGHVTQNNLKEAFRVHDEMLQRGFVPDD 587


>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
 gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
          Length = 1013

 Score =  252 bits (643), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 162/554 (29%), Positives = 266/554 (48%), Gaps = 11/554 (1%)

Query: 30  LNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILT 89
           L+P   SSL           L+     P L   FF W+   +     +  +   +   L 
Sbjct: 79  LSPAAISSLVRRRPSPSSPRLH-----PKLLLDFFYWSSPQLAPSAPAPDAFAHLAMSLC 133

Query: 90  KNKHFKSAQNMLEKIALRDFLSTPSVLNALVK-IHDDPDGNSHVLSWLVIFYANLKMTQD 148
               F  A  +L K+ +R + S P VL ++ + + D    +  VL  LV  Y      QD
Sbjct: 134 AGSLFNLANGLLIKM-IRAYPSPPVVLASIHRALSDSGHRSPAVLDVLVDTYKKSGRVQD 192

Query: 149 GLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIH 208
             +V   MR   + P +  C  LL  L +     ++WKV + MV  G+  +++ Y+ LI 
Sbjct: 193 AAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMALLWKVREFMVGAGISPDVYTYSTLIE 252

Query: 209 ACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISP 268
           A CK  + D  +K+L EM  +    +  TYN LIA  C+ G   EA   +  ME  G+ P
Sbjct: 253 AYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVP 312

Query: 269 DIVTYNSLIHGFCREGRMREARRLFRDIKGAT--PNHVTYTTLIDGYCRANDLEEALRLR 326
           D  TY +LI+G C+  R  EA+ L  ++  A   PN V Y  LIDG+ R  + +EA ++ 
Sbjct: 313 DGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMI 372

Query: 327 EVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKI 386
           + M A GV P  +TY++++R LCK G++  A+ LL +M      PD +T N +I  + + 
Sbjct: 373 KEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRH 432

Query: 387 GDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSY 446
                A ++ + M  AG+  + +TY  +IHG C++ E + A +LL  M   G  P+   Y
Sbjct: 433 HSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVY 492

Query: 447 SWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQG 506
           + L+ GYC + N     ++ D+     +  D+  Y +LI    K  +V+ + + F  MQ 
Sbjct: 493 APLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQE 552

Query: 507 NGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI-- 564
            G+L +   Y+ L + Y + G+ ++   ++  M    L     IY     SY K ++I  
Sbjct: 553 RGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEK 612

Query: 565 LDLFWSHVVDRGLM 578
           +   +  ++D+G+M
Sbjct: 613 VSSTFKSMLDQGVM 626



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 126/440 (28%), Positives = 201/440 (45%), Gaps = 39/440 (8%)

Query: 126 PDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVW 185
           PDG ++    L+      + + +   + D+M    L P++     L++   ++   D  +
Sbjct: 312 PDGFTY--GALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAF 369

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
           K+ K+MV  GV  N   Y+ L+   CK   +D+   LL +M     R D  TYN +I  +
Sbjct: 370 KMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGH 429

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNH 303
            +     +A  +   ME  GISP++ TY+ +IHG C+ G   +A  L  ++  KG  PN 
Sbjct: 430 FRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNA 489

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
             Y  LI GYCR  ++  A  + + M    V P +  YNS++  L K GR+ ++ +   +
Sbjct: 490 FVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQ 549

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGL------------------- 404
           M E+ + P+  T + LI+ Y K GD  SA ++  RML+ GL                   
Sbjct: 550 MQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDD 609

Query: 405 ----------------MLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
                           MLD   Y  LIH    +  M+ A  +L G+   G  P    YS 
Sbjct: 610 IEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSS 669

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG 508
           L+ G C   + E    +LDE   +G+  ++  Y ALI   CK   + YA+ +FN +   G
Sbjct: 670 LISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKG 729

Query: 509 ILGDSVIYTSLAYAYWRAGE 528
           ++ + V YTSL     + G+
Sbjct: 730 LVPNCVTYTSLIDGSCKVGD 749



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 111/411 (27%), Positives = 201/411 (48%), Gaps = 2/411 (0%)

Query: 156 MRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSD 215
           M  + L+P       L+N L K R ++    +  +M    +  N+ +Y  LI    +  +
Sbjct: 305 MEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGN 364

Query: 216 VDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNS 275
            D+  K++ EM    V+ +  TY+ L+   CK G    A  +  +M R+   PD +TYN 
Sbjct: 365 ADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNL 424

Query: 276 LIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKG 333
           +I G  R    ++A RL  +++  G +PN  TY+ +I G C++ + E+A  L E M  KG
Sbjct: 425 IIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKG 484

Query: 334 VYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAM 393
           + P    Y  ++   C+EG +  A  + ++M +  + PD    N+LI    K+G    + 
Sbjct: 485 LKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEEST 544

Query: 394 KVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGY 453
           K   +M E GL+ ++FTY  LIHG+ K  +++ A++L+  MLD G  P+   Y  L++ Y
Sbjct: 545 KYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESY 604

Query: 454 CNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDS 513
              ++ E +       + +G+ +D  +Y  LI        ++ A R+ + ++ NG + D 
Sbjct: 605 FKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDV 664

Query: 514 VIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
            +Y+SL     +  + +    ILD+M ++ +   +  Y +      K  +I
Sbjct: 665 HVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDI 715



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 106/364 (29%), Positives = 181/364 (49%), Gaps = 10/364 (2%)

Query: 185 WKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIAL 244
           +++  +M   G+  N++ Y+++IH  C+S + +K   LL EM  K ++ + F Y  LI+ 
Sbjct: 439 FRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISG 498

Query: 245 YCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPN 302
           YC++G    A  + D+M +  + PD+  YNSLI G  + GR+ E+ + F  +  +G  PN
Sbjct: 499 YCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPN 558

Query: 303 HVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLN 362
             TY+ LI GY +  DLE A +L + M   G+ P  V Y  +L    K   I   +    
Sbjct: 559 EFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFK 618

Query: 363 EMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAK 422
            M ++ +  DN     LI+     G+  +A +V + + + G + D   Y +LI G CK  
Sbjct: 619 SMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTA 678

Query: 423 EMDIAKELLFGMLDA----GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDV 478
           +    +E  FG+LD     G  P+   Y+ L+DG C   +      + +  +++GL  + 
Sbjct: 679 D----REKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNC 734

Query: 479 SVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDD 538
             Y +LI   CK   +  A  L+N M   GI  D+ +Y+ L      AG+ +    ++++
Sbjct: 735 VTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEE 794

Query: 539 MYRR 542
           M+ R
Sbjct: 795 MFLR 798



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 129/482 (26%), Positives = 221/482 (45%), Gaps = 22/482 (4%)

Query: 62  AFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVK 121
           AF   +E        ++ ++  MIH L ++   + A ++LE++  +              
Sbjct: 438 AFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGL------------ 485

Query: 122 IHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLT 181
                  N+ V + L+  Y          ++FD+M   N++P L+    L+  L+K    
Sbjct: 486 -----KPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRV 540

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
           +   K + +M + G++ N   Y+ LIH   K+ D++  E+L+  M    ++ +   Y  L
Sbjct: 541 EESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDL 600

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GA 299
           +  Y K     +  +    M  +G+  D   Y  LIH     G M  A R+   I+  G+
Sbjct: 601 LESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGS 660

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
            P+   Y++LI G C+  D E+A  + + M+ KGV P +V YN+++  LCK G I  A  
Sbjct: 661 VPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARN 720

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
           + N +  K + P+ VT  +LI+  CK+GD ++A  + N ML  G+  D F Y  L  G  
Sbjct: 721 VFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCS 780

Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
            A +++ A  L+  M   G + S  S++ LVDG+C +   +  LKLL   + RGL  +  
Sbjct: 781 SAGDLEQAMFLIEEMFLRGHA-SISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNAL 839

Query: 480 VYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
               +I    +  K+     +F  +Q       +  ++SL       G  K   D++DDM
Sbjct: 840 TIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQG--KIPLDVVDDM 897

Query: 540 YR 541
            R
Sbjct: 898 IR 899



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 107/402 (26%), Positives = 171/402 (42%), Gaps = 56/402 (13%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N    S L+  Y      +   Q+  +M    L P+      LL S  K    + V   +
Sbjct: 558 NEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTF 617

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
           K M+  GV+ +  +Y +LIH    S +++   ++L  +E      D+  Y++LI+  CK 
Sbjct: 618 KSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKT 677

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTY 306
               +A  + D M ++G+ P+IV YN+LI G C+ G +  AR +F  I  KG  PN VTY
Sbjct: 678 ADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTY 737

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
           T+LIDG C+  D+  A  L   M A G+ P    Y+ +       G +  A  L+ EM  
Sbjct: 738 TSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFL 797

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKA----- 421
           +  A  + + N L++ +CK G     +K+ + ++  GL+ +  T + +I G  +A     
Sbjct: 798 RGHASIS-SFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSE 856

Query: 422 ----------------------------------------------KEMDIAKELLF-GM 434
                                                         KE ++ K L+   +
Sbjct: 857 VHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDV 916

Query: 435 LDAGFSPSYCS-YSWLVDGYCNKNNEEALLKLLDEFVSRGLC 475
           + A  +P  CS Y  +VD  C K      L LL E   RG+C
Sbjct: 917 IVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGIC 958



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 79/329 (24%), Positives = 148/329 (44%), Gaps = 58/329 (17%)

Query: 170 VLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFK 229
           +L+++L+     +  ++V   + + G V ++H+Y+ LI   CK++D +K   +L EM  K
Sbjct: 634 ILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKK 693

Query: 230 DVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA 289
            V  ++  YN LI   CK G    A  V + +  +G+ P+ VTY SLI G C+ G +  A
Sbjct: 694 GVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNA 753

Query: 290 RRLFRDI--KGATPNHVTYTTL----------------------------------IDGY 313
             L+ ++   G TP+   Y+ L                                  +DG+
Sbjct: 754 FYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISSFNNLVDGF 813

Query: 314 CRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM--------- 364
           C+   ++E L+L  V+  +G+ P  +T  +I+  L + G++ + + +  E+         
Sbjct: 814 CKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAA 873

Query: 365 -----------NEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKA 413
                      N+ KI  D V  + +I  +CK G+   A+ +++ ++     +   +Y A
Sbjct: 874 RHFSSLFMDMINQGKIPLDVV--DDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLA 931

Query: 414 LIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           ++   C+  ++  A  LL  M   G  PS
Sbjct: 932 IVDNLCRKGKLSEALNLLKEMDKRGICPS 960



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 62/250 (24%), Positives = 122/250 (48%), Gaps = 21/250 (8%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
            VF+ +    L+P+    T L++   K       + +Y +M+  G+  +  +Y+VL   C
Sbjct: 720 NVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGC 779

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
             + D+++   L+ EM F    A + ++N L+  +CK+G   E L +   +   G+ P+ 
Sbjct: 780 SSAGDLEQAMFLIEEM-FLRGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNA 838

Query: 271 VTYNSLIHGFCREGRMREARRLFRDIKGATPNHVT--YTTL------------------I 310
           +T  ++I G    G++ E   +F +++  T       +++L                  I
Sbjct: 839 LTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDMI 898

Query: 311 DGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIA 370
             +C+  +L++AL LR+V+ AK    G  +Y +I+  LC++G++ +A  LL EM+++ I 
Sbjct: 899 RDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGIC 958

Query: 371 PDNVTCNTLI 380
           P    C  L+
Sbjct: 959 PSENQCLILL 968


>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 643

 Score =  251 bits (642), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 161/569 (28%), Positives = 266/569 (46%), Gaps = 34/569 (5%)

Query: 25  HWAKLLNPNIASSLTSTAI----HKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQS 80
           H  K L PN++ SL S  +     K  L L    HI       FK  +         +++
Sbjct: 71  HLIKHLAPNLSPSLISATLLSLHKKSDLALQFVTHIG------FKGLD---------IKT 115

Query: 81  HWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSH-VLSWLVIF 139
               + +++++   KS  ++L++           V + L    D     S  V   L+  
Sbjct: 116 KCLAVAVVSRSPSPKSTLHLLKQTIESRVAGVKDVFHELAITRDRLGTKSSIVFDMLIRA 175

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
              LK   D  + FD M+   ++P +     +L+   K   T+ VW +Y +M +L + + 
Sbjct: 176 CCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEMFRLKIKST 235

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
           ++ +N++I+  CK   + K +  +  ME   V+ ++ TYNT+I  YC +G    A  V D
Sbjct: 236 VYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLD 295

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRAN 317
            M+  G+ PD  TY SLI G C+ G++ EA  +   +K  G  P  VTY TLIDGYC   
Sbjct: 296 IMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKG 355

Query: 318 DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCN 377
           DL +A   R+ M  + + P V TYN ++  L  EG++ +A+ ++ +M +  I PD++T N
Sbjct: 356 DLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYN 415

Query: 378 TLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA 437
            LIN YC+ G+   A  + + M+  G+     TY +LI+   K   M  A +L   ++  
Sbjct: 416 ILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIRE 475

Query: 438 GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYA 497
           G SP    ++ L+DG+C   N +    LL E   R +  D   Y  L++  C++ KV+ A
Sbjct: 476 GASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEA 535

Query: 498 QRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSAS 557
           + L   M+  GI  D + Y +L   Y + G+      I D+M       TL  Y +    
Sbjct: 536 RELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQG 595

Query: 558 YAKDNEILDLFWSHVVDRGLMSKHIFKEM 586
             K+ +            G +++ + KEM
Sbjct: 596 LCKNQQ------------GDLAEELLKEM 612



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 151/560 (26%), Positives = 253/560 (45%), Gaps = 47/560 (8%)

Query: 27  AKLLNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIH 86
           A+ L+PN ++       H+ LL+        S+  + +   +   PN   SL S      
Sbjct: 41  AETLHPNASTDSPLVITHQSLLD--------SIQSSQWHLIKHLAPNLSPSLISAT---- 88

Query: 87  ILTKNKHFKSAQNMLEKIALRDF-LSTPSVLNALVKIHDDPDGNSHVLSWLV-------- 137
           +L+ +K    A   +  I  +   + T  +  A+V     P    H+L   +        
Sbjct: 89  LLSLHKKSDLALQFVTHIGFKGLDIKTKCLAVAVVSRSPSPKSTLHLLKQTIESRVAGVK 148

Query: 138 -IFYANLKMTQDGLQ-----VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKM 191
            +F+  L +T+D L      VFD +        + AC  L       +  D  ++ +  M
Sbjct: 149 DVFH-ELAITRDRLGTKSSIVFDML--------IRACCEL-------KRGDDAFECFDMM 192

Query: 192 VQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMH 251
            + GVV  I  +N ++    K +  + V  L  EM    +++ ++T+N +I + CK+G  
Sbjct: 193 KEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIMINVLCKEGKL 252

Query: 252 YEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI---KGATPNHVTYTT 308
            +A      ME  G+ P++VTYN++IHG+C  GR+ E  R+  DI   +G  P+  TY +
Sbjct: 253 KKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRV-EGARMVLDIMKNRGVEPDSYTYGS 311

Query: 309 LIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKK 368
           LI G C+   LEEA  + E M   G+ P  VTYN+++   C +G +  A    +EM  + 
Sbjct: 312 LISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRA 371

Query: 369 IAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAK 428
           I P   T N LI+A    G    A  +   M ++G++ D  TY  LI+G+C+      A 
Sbjct: 372 ILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAF 431

Query: 429 ELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRF 488
            L   M+  G  P+  +Y+ L+     +N  +A   L ++ +  G   D+ ++ ALI   
Sbjct: 432 NLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGH 491

Query: 489 CKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITL 548
           C    +D A  L   M    I+ D V Y +L     R G+ +   ++L +M RR +    
Sbjct: 492 CANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDH 551

Query: 549 KIYRSFSASYAKDNEILDLF 568
             Y +  + Y+K  +I D F
Sbjct: 552 ISYNTLISGYSKRGDINDAF 571



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 61/247 (24%), Positives = 105/247 (42%), Gaps = 21/247 (8%)

Query: 44  HKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEK 103
           + +L+N Y  C   +   AF    E      + +L ++ ++I++L+K    K+A ++ EK
Sbjct: 414 YNILINGY--CRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEK 471

Query: 104 IALRDFLSTPSVL-NALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLM 162
           I +R+  S   ++ NAL+  H                 AN  + +    +  +M   N++
Sbjct: 472 I-IREGASPDLIMFNALIDGH----------------CANGNLDR-AFALLKEMDKRNIV 513

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
           P       L+    ++   +   ++ K+M + G+  +   YN LI    K  D++    +
Sbjct: 514 PDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTI 573

Query: 223 LCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR 282
             EM        L TYN LI   CK      A  +   M  +GI+PD  TY SLI G  +
Sbjct: 574 RDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEGIGK 633

Query: 283 EGRMREA 289
                EA
Sbjct: 634 VDDSSEA 640


>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 583

 Score =  251 bits (642), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 149/536 (27%), Positives = 281/536 (52%), Gaps = 11/536 (2%)

Query: 14  IKTISAIMLKGHWAKLLNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPN 73
           I TIS ++ K HW++L  P++  +  +T + ++L    N      L   FFKW++     
Sbjct: 20  IPTISELLSKQHWSEL-KPHLRVTKPATFLDQLL----NAGVDSELVLRFFKWSQKEY-R 73

Query: 74  YKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVL 133
             + L+    ++H L  +K +   ++ L+     +  +  SV ++L+     P   + ++
Sbjct: 74  LSYGLEPTSKVLHFLANSKRYSKVRSFLDSFVKNEKHTVSSVFHSLLLDGGRPGATALII 133

Query: 134 SWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQ 193
             LV+ Y          + F + + +     L +C  LL++L K+     V  VYK+M++
Sbjct: 134 DMLVLAYVKNLELHCAYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIK 193

Query: 194 LGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMH-- 251
             +  N++ +N+ I+  C++  ++K E  + +M+   +  ++ TYNTL+  YCK+G    
Sbjct: 194 RRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGK 253

Query: 252 -YEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTT 308
            Y+A A    M    I P+ VT+N+LI GFC++  +  A++ F +++  G  PN VTY +
Sbjct: 254 MYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNS 313

Query: 309 LIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKK 368
           LI+G C    LEEA+ L + M   G+ P +VTYN+++   CK+  +++A ++ +++++++
Sbjct: 314 LINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQE 373

Query: 369 IAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAK 428
           + P+ +T NT+I+AYCK G       + + ML+ G++ +  TY  LI G C+ +++  AK
Sbjct: 374 LVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAK 433

Query: 429 ELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRF 488
           ELL  M + G      +Y+ L+DG C  +      KLL+E  + GL  +   Y  L+  +
Sbjct: 434 ELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGY 493

Query: 489 CKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL 544
           C + K+  A  +   M+      + V Y  L   Y +  + +A + +L++M  + L
Sbjct: 494 CMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGL 549



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 70/221 (31%), Positives = 120/221 (54%), Gaps = 6/221 (2%)

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           L+  +   KM ++  +VFD +    L+P++     ++++  K+ + +  + +   M+  G
Sbjct: 349 LINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEG 408

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
           ++ N+  YN LI   C+  D+   ++LL EME K ++ D+ TYN LI   CK      A 
Sbjct: 409 ILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAE 468

Query: 256 AVQDRMEREGISPDIVTYNSLIHGFCREGRMREA----RRLFRDIKGATPNHVTYTTLID 311
            + + M   G+ P+ VTYN+L+ G+C EG+++ A     R+ ++ K   PN VTY  LI 
Sbjct: 469 KLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERK--QPNVVTYNVLIK 526

Query: 312 GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEG 352
           GYC+ N LE A  L   M  KG+ P   TY+ +  ++ ++G
Sbjct: 527 GYCKINKLEAANGLLNEMLEKGLNPNRTTYDIVRLEMLEKG 567



 Score = 48.5 bits (114), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 54/280 (19%), Positives = 106/280 (37%), Gaps = 61/280 (21%)

Query: 30  LNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILT 89
           L PNI +       +  L+N    C+   L  A   W +      K ++ ++  +I+   
Sbjct: 304 LKPNIVT-------YNSLIN--GLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFC 354

Query: 90  KNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDG 149
           K K  K A  + + ++ ++ +  P+V+                 + ++  Y    M ++G
Sbjct: 355 KKKMMKEATKVFDDVSKQELV--PNVI---------------TFNTMIDAYCKEGMMEEG 397

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
             +   M    ++P++     L+  L + +      ++  +M   G+  ++  YN+LI  
Sbjct: 398 FSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDG 457

Query: 210 CCKSSDVDKVEKLLCEM-----------------------------------EFKDVRAD 234
            CK+      EKLL EM                                   E +  + +
Sbjct: 458 LCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPN 517

Query: 235 LFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYN 274
           + TYN LI  YCK      A  + + M  +G++P+  TY+
Sbjct: 518 VVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYD 557


>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
 gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  251 bits (641), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 157/542 (28%), Positives = 266/542 (49%), Gaps = 14/542 (2%)

Query: 25  HWAKLLNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTM 84
           H+ K L   I  SL STA    L +L+     P L+  F     + +      ++S    
Sbjct: 26  HFIKHLAHKITPSLISTA----LTSLHKT---PDLAFQFV----THIGFGDLDIKSKCLA 74

Query: 85  IHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYA-NL 143
           + +++   + K +  +L++       S   V N L          ++VL  L+I     L
Sbjct: 75  MAVISHAPNSKPSLQLLKETINSGVYSIREVFNELGVARGVLGIKTYVLYDLLIRACCEL 134

Query: 144 KMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLY 203
           K   D  + FD M+   ++PH+HAC  +L+   K   T+  W +Y +M ++ + +++  +
Sbjct: 135 KRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMFRMRIKSSVVTF 194

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER 263
           N++I+  CK   + K ++ +  ME   ++ ++ TYNT+I  YC +G    A  + D M+ 
Sbjct: 195 NIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKC 254

Query: 264 EGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEE 321
            G+ PD  TY S I G C+EG++ EA  +   +K  G  P  VTY TLIDGYC   +LE 
Sbjct: 255 RGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEM 314

Query: 322 ALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
           A   R+ M  +G+ P V TYN ++  L  + ++ +A+ ++ EM+EK + PD+VT N LIN
Sbjct: 315 AFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILIN 374

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
            YC+ G+   A  + + M+  G+   + TY +LI+   K   M  A +L   ++  G  P
Sbjct: 375 GYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFP 434

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
               ++ L+DG+C   N +    +L E     +  D   +  L++  C++ KV+ A+ L 
Sbjct: 435 DLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELI 494

Query: 502 NLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKD 561
             M+  GI  D + Y +L   Y + G+ K    + D+M       TL  Y +      K+
Sbjct: 495 EEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKN 554

Query: 562 NE 563
            E
Sbjct: 555 EE 556



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 105/311 (33%), Positives = 169/311 (54%), Gaps = 2/311 (0%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           ++   + ++M+   L P       L++        +M +    KMV+ G++  +  YN+L
Sbjct: 278 EEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNML 337

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           IHA      +D+ + ++ EM  K +  D  TYN LI  YC+ G   +A  + D M  +GI
Sbjct: 338 IHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGI 397

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
            P  VTY SLI+   + GRM++A  LF  I  KG  P+ + +  LIDG+C   +++ A  
Sbjct: 398 QPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFA 457

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           + + M    V P  VT+N++++  C+EG++  A  L+ EM  + I PD+++ NTLI+ Y 
Sbjct: 458 MLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYS 517

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           K GD   A +V++ ML  G      TY ALI G CK +E D A++LL  M+  G +P+  
Sbjct: 518 KRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDN 577

Query: 445 SYSWLVDGYCN 455
           +Y  L++G  N
Sbjct: 578 TYLSLIEGIGN 588



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 86/313 (27%), Positives = 123/313 (39%), Gaps = 37/313 (11%)

Query: 302 NHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLL 361
            +V Y  LI   C     ++A    ++M  KGV P V   N +L    K  R   A  L 
Sbjct: 120 TYVLYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLY 179

Query: 362 NEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGF--- 418
            EM   +I    VT N +IN  CK G    A +    M   G+  +  TY  +IHG+   
Sbjct: 180 AEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSR 239

Query: 419 --------------------------------CKAKEMDIAKELLFGMLDAGFSPSYCSY 446
                                           CK  +++ A  +L  M + G  P+  +Y
Sbjct: 240 GRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTY 299

Query: 447 SWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQG 506
           + L+DGYCNK N E      D+ V  GL   VS Y  LI       K+D A  +   M  
Sbjct: 300 NTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSE 359

Query: 507 NGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI-- 564
            G++ DSV Y  L   Y R G  K    + D+M  + +  T   Y S     +K   +  
Sbjct: 360 KGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQ 419

Query: 565 LDLFWSHVVDRGL 577
            D  +  +V +G+
Sbjct: 420 ADDLFEKIVRKGI 432



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 70/277 (25%), Positives = 122/277 (44%), Gaps = 56/277 (20%)

Query: 38  LTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSA 97
           +  +  + +L+N Y  C   ++  AF    E      + +  ++ ++I++L+K    K A
Sbjct: 363 VPDSVTYNILINGY--CRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQA 420

Query: 98  QNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMR 157
            ++ EKI  +       + NAL+  H                 AN  M            
Sbjct: 421 DDLFEKIVRKGIFPDLIMFNALIDGH----------------CANGNM------------ 452

Query: 158 VHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVD 217
                               DR     + + K+M Q+ VV +   +N L+   C+   V+
Sbjct: 453 --------------------DR----AFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVE 488

Query: 218 KVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLI 277
              +L+ EM+ + ++ D  +YNTLI+ Y K+G   +A  V+D M   G +P ++TYN+LI
Sbjct: 489 AARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALI 548

Query: 278 HGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDG 312
            G C+      A +L +++  KG TPN  TY +LI+G
Sbjct: 549 QGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLIEG 585


>gi|356552005|ref|XP_003544362.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g09680-like [Glycine max]
          Length = 509

 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 131/367 (35%), Positives = 205/367 (55%), Gaps = 4/367 (1%)

Query: 165 LHACTVLLNSLAKDRLTDM--VWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
           +  C  LL  + + R  ++   W  Y +++  G   N   +NVL+H  CK   V     +
Sbjct: 105 VQGCENLLRRVVRLRPVELERSWAFYLEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLV 164

Query: 223 LCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR 282
             E+  + +R  + ++NTLI+  CK G   E   ++  ME E + PD+ T+++LI+G C+
Sbjct: 165 FDEIPKRGLRPTVVSFNTLISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCK 224

Query: 283 EGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVT 340
           EGR+ E   LF ++  KG  PN VT+T LIDG C+   ++ AL+  ++M A+GV P +VT
Sbjct: 225 EGRLDEGSLLFDEMCGKGLVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVT 284

Query: 341 YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML 400
           YN+++  LCK G +++A RL+NEM+   + PD +T  TLI+  CK GD  SA+++K RM+
Sbjct: 285 YNALINGLCKVGDLKEARRLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMV 344

Query: 401 EAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEE 460
           E G+ LD   +  LI G C+   +  A+ +L  ML AGF P   +Y+ +VD +C K N  
Sbjct: 345 EEGIELDDVAFTVLISGLCRDGRVHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVX 404

Query: 461 ALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLA 520
              KLL E  S G    V  Y AL+   CK+ +V  A+ L + M   G+  + + Y  L 
Sbjct: 405 MGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQVKNAKMLLDAMLNVGVAPNDITYNILL 464

Query: 521 YAYWRAG 527
             + + G
Sbjct: 465 EGHSKHG 471



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 108/350 (30%), Positives = 185/350 (52%), Gaps = 6/350 (1%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           VFD++    L P + +   L++   K    +  +++   M    V  ++  ++ LI+  C
Sbjct: 164 VFDEIPKRGLRPTVVSFNTLISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGLC 223

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           K   +D+   L  EM  K +  +  T+  LI   CK G    AL     M  +G+ PD+V
Sbjct: 224 KEGRLDEGSLLFDEMCGKGLVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLV 283

Query: 272 TYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           TYN+LI+G C+ G ++EARRL  ++   G  P+ +T+TTLIDG C+  D+E AL ++  M
Sbjct: 284 TYNALINGLCKVGDLKEARRLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRM 343

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
             +G+    V +  ++  LC++GR+ DA R+L +M      PD+ T   +++ +CK G+ 
Sbjct: 344 VEEGIELDDVAFTVLISGLCRDGRVHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNV 403

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
               K+   M   G +    TY AL++G CK  ++  AK LL  ML+ G +P+  +Y+ L
Sbjct: 404 XMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQVKNAKMLLDAMLNVGVAPNDITYNIL 463

Query: 450 VDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQR 499
           ++G+ +K+     + + +    +GL  D + Y AL+    K  K D+ +R
Sbjct: 464 LEGH-SKHGSSVDVDIFNS--EKGLVKDYASYTALVNESSKTSK-DHLKR 509



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 95/271 (35%), Positives = 154/271 (56%), Gaps = 5/271 (1%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           +G  +FD+M    L+P+    TVL++   K    D+  K ++ M+  GV  ++  YN LI
Sbjct: 230 EGSLLFDEMCGKGLVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALI 289

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           +  CK  D+ +  +L+ EM    +R D  T+ TLI   CK G    AL ++ RM  EGI 
Sbjct: 290 NGLCKVGDLKEARRLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIE 349

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
            D V +  LI G CR+GR+ +A R+ RD+   G  P+  TYT ++D +C+  ++    +L
Sbjct: 350 LDDVAFTVLISGLCRDGRVHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKL 409

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
            + M + G  PGVVTYN+++  LCK+G++++A  LL+ M    +AP+++T N L+  + K
Sbjct: 410 LKEMQSDGHVPGVVTYNALMNGLCKQGQVKNAKMLLDAMLNVGVAPNDITYNILLEGHSK 469

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIH 416
            G   S++ V     E GL+ D  +Y AL++
Sbjct: 470 HG---SSVDVDIFNSEKGLVKDYASYTALVN 497



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 94/302 (31%), Positives = 154/302 (50%), Gaps = 2/302 (0%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEA 322
           G  P+   +N L+HGFC+ G +  AR +F +I  +G  P  V++ TLI G C+A  +EE 
Sbjct: 137 GYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCCKAGAVEEG 196

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            RL+ VM ++ V P V T+++++  LCKEGR+ + + L +EM  K + P+ VT   LI+ 
Sbjct: 197 FRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFTVLIDG 256

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
            CK G    A+K    ML  G+  D  TY ALI+G CK  ++  A+ L+  M  +G  P 
Sbjct: 257 QCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASGLRPD 316

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +++ L+DG C   + E+ L++    V  G+ +D   +  LI   C+  +V  A+R+  
Sbjct: 317 RITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAERMLR 376

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDN 562
            M   G   D   YT +   + + G       +L +M     +  +  Y +      K  
Sbjct: 377 DMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQG 436

Query: 563 EI 564
           ++
Sbjct: 437 QV 438



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 67/261 (25%), Positives = 116/261 (44%), Gaps = 11/261 (4%)

Query: 317 NDLEEALRLREVMAAK-----------GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMN 365
           N L   +RLR V   +           G  P    +N ++   CK G +  A  + +E+ 
Sbjct: 110 NLLRRVVRLRPVELERSWAFYLEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIP 169

Query: 366 EKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMD 425
           ++ + P  V+ NTLI+  CK G      ++K  M    +  D FT+ ALI+G CK   +D
Sbjct: 170 KRGLRPTVVSFNTLISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLD 229

Query: 426 IAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
               L   M   G  P+  +++ L+DG C     +  LK     +++G+  D+  Y ALI
Sbjct: 230 EGSLLFDEMCGKGLVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALI 289

Query: 486 RRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
              CK   +  A+RL N M  +G+  D + +T+L     + G+ ++  +I   M    + 
Sbjct: 290 NGLCKVGDLKEARRLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIE 349

Query: 546 ITLKIYRSFSASYAKDNEILD 566
           +    +    +   +D  + D
Sbjct: 350 LDDVAFTVLISGLCRDGRVHD 370


>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
 gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
          Length = 751

 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 170/589 (28%), Positives = 290/589 (49%), Gaps = 24/589 (4%)

Query: 3   SLVALNSDTKFIKTISAIMLKGHWAKLLNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCA 62
           SL  L+S T  +    A+ L   +   LN +I+S +T      +LL   N     +L+  
Sbjct: 11  SLSTLSSPTDALLAEKALTLLKRYPYHLN-SISSQITPELASYLLLQTQN---DRTLTLK 66

Query: 63  FFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKI 122
           F  +A+   P+   +       +HILTK K +K+AQN+ + +A     S     N   + 
Sbjct: 67  FINFAK---PHQFFNPHCKCIALHILTKFKLYKTAQNLAQDLAEN---SVDEKGNYFFQC 120

Query: 123 HDDP----DGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKD 178
             D     + +S V   +V   + L   +  L + D  +++  MP + +   +L+S+ + 
Sbjct: 121 LKDTYFMCNSSSAVFDLVVKSCSYLNFIEKALNIVDLAKLNGFMPGVLSYNAILDSIVRC 180

Query: 179 RLTDM-VWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFT 237
           R   +   KVY++M+  GV  N+  YN+LI   C + +++   +   EME      ++ T
Sbjct: 181 RKPVIFAEKVYREMIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVT 240

Query: 238 YNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR--D 295
           YNT+I  YCK     EA  +   M  EG+ P+++TYN +I+G CR GR+ E   +    D
Sbjct: 241 YNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMD 300

Query: 296 IKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIR 355
            KG  P+ VTY TL++GYC+  +  +AL L   M   G+ P VVTY S++  +CK G + 
Sbjct: 301 RKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLN 360

Query: 356 DANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALI 415
            A    ++M+ + + P+ VT  +LIN + + G    A ++ + M+ +G      TY AL+
Sbjct: 361 RAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALL 420

Query: 416 HGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLC 475
           +G C +  M+ A  LL GM   G SP   SYS ++ G+C     +   ++  E V +G+ 
Sbjct: 421 NGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVS 480

Query: 476 VDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDI 535
            D   Y +LI+  C++ +++ A  LF  M    +L D   YTSL   Y + G+     ++
Sbjct: 481 PDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNL 540

Query: 536 LDDMYRRRLM---ITLKIYRSFSASYAKDNE----ILDLFWSHVVDRGL 577
            D+M ++  +   +T  +  +     A+  E    +L LF+   +  G+
Sbjct: 541 HDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGI 589



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 127/402 (31%), Positives = 213/402 (52%), Gaps = 24/402 (5%)

Query: 141 ANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANI 200
            NL+M   GL+ F++M  +  +P++     ++ +  K +  D  +K+ + M   G+  N+
Sbjct: 217 GNLEM---GLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNL 273

Query: 201 HLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDR 260
             YN++I+  C+   +++   +L EM+ K    D  TYNTL+  YCK G  ++AL +   
Sbjct: 274 LTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSE 333

Query: 261 MEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRAND 318
           M R G+ PD+VTY SLI+  C+ G +  A   F    ++G  PN VTYT+LI+G+ +   
Sbjct: 334 MLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGF 393

Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT 378
           ++EA R+ + M   G  P +VTYN++L   C  GR+ +A  LL  M  K ++PD V+ +T
Sbjct: 394 MDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYST 453

Query: 379 LINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAG 438
           +I  +C+  +   A ++   M+E G+  D  TY +LI G C+ + ++ A +L   ML+  
Sbjct: 454 IIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKS 513

Query: 439 FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQ 498
             P   +Y+ L++GYC + +    L L DE + +G   D   Y  LI    K+ +   A+
Sbjct: 514 LLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAK 573

Query: 499 RL-----FNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDI 535
           RL     ++    NGI  D++I              ++CSDI
Sbjct: 574 RLLLKLFYDESIPNGITYDTLI--------------ESCSDI 601



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 118/407 (28%), Positives = 200/407 (49%), Gaps = 17/407 (4%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           V  +M      P       L+N   K         ++ +M++ G+  ++  Y  LI+  C
Sbjct: 295 VLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMC 354

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           K+ ++++  +   +M  + +R +  TY +LI  + +KG   EA  + D M R G  P IV
Sbjct: 355 KAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIV 414

Query: 272 TYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           TYN+L++G C  GRM EA  L R +  KG +P+ V+Y+T+I G+CR  +L+ A ++   M
Sbjct: 415 TYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEM 474

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
             KGV P  +TY+S+++ LC++ R+ +A  L  EM  K + PD  T  +LIN YCK GD 
Sbjct: 475 VEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDL 534

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
             A+ + + M++ G + D  TY  LI+G  K      AK LL  +      P+  +Y  L
Sbjct: 535 NEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTL 594

Query: 450 VD---------------GYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKV 494
           ++               G+C K       ++ +  + R    + +VY  +I   C+   V
Sbjct: 595 IESCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNV 654

Query: 495 DYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
             A +L+  M   G +  +V   +L  A +  G  +  + ++ D+ R
Sbjct: 655 HKAHKLYKEMVDFGFIPHTVTIIALVKALYSEGMDEQLNLVIRDILR 701



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 115/379 (30%), Positives = 192/379 (50%), Gaps = 17/379 (4%)

Query: 149 GLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIH 208
            ++ FDQM V  L P+    T L+N  ++    D  ++++ +M++ G    I  YN L++
Sbjct: 362 AMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLN 421

Query: 209 ACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISP 268
             C S  +++   LL  ME K +  D+ +Y+T+IA +C+      A  +   M  +G+SP
Sbjct: 422 GHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSP 481

Query: 269 DIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLR 326
           D +TY+SLI G C + R+ EA  LF+++  K   P+  TYT+LI+GYC+  DL EAL L 
Sbjct: 482 DAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLH 541

Query: 327 EVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA---- 382
           + M  KG  P  VTYN ++  L K+ R R+A RLL ++   +  P+ +T +TLI +    
Sbjct: 542 DEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSDI 601

Query: 383 -----------YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
                      +C  G    A +V   M++     ++  Y  +IHG C+   +  A +L 
Sbjct: 602 EFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLY 661

Query: 432 FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
             M+D GF P   +   LV    ++  +E L  ++ + +      D  + +AL++   K+
Sbjct: 662 KEMVDFGFIPHTVTIIALVKALYSEGMDEQLNLVIRDILRSCKLSDAELSKALVQINHKE 721

Query: 492 EKVDYAQRLFNLMQGNGIL 510
             +D    L   M  +G L
Sbjct: 722 GNIDAVFNLLTEMAKDGFL 740



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 91/313 (29%), Positives = 145/313 (46%), Gaps = 17/313 (5%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           ++ + +   M    L P + + + ++    + +  D  +++  +MV+ GV  +   Y+ L
Sbjct: 430 EEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSL 489

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           I   C+   +++   L  EM  K +  D FTY +LI  YCK+G   EAL + D M ++G 
Sbjct: 490 IQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGF 549

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLID------------- 311
            PD VTYN LI+G  ++ R REA+RL   +    + PN +TY TLI+             
Sbjct: 550 LPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSDIEFKSVVAL 609

Query: 312 --GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI 369
             G+C    + EA ++ E M  +   P    YN I+   C++G +  A++L  EM +   
Sbjct: 610 IKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGF 669

Query: 370 APDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKE 429
            P  VT   L+ A    G       V   +L +  + D    KAL+    K   +D    
Sbjct: 670 IPHTVTIIALVKALYSEGMDEQLNLVIRDILRSCKLSDAELSKALVQINHKEGNIDAVFN 729

Query: 430 LLFGMLDAGFSPS 442
           LL  M   GF PS
Sbjct: 730 LLTEMAKDGFLPS 742



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/297 (22%), Positives = 126/297 (42%), Gaps = 19/297 (6%)

Query: 126 PDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVW 185
           PD  S+  S ++  +   +      Q+  +M    + P     + L+  L + R  +   
Sbjct: 446 PDVVSY--STIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEAC 503

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
            ++++M+   ++ +   Y  LI+  CK  D+++   L  EM  K    D  TYN LI   
Sbjct: 504 DLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGL 563

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIH---------------GFCREGRMREAR 290
            K+    EA  +  ++  +   P+ +TY++LI                GFC +G M EA 
Sbjct: 564 NKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEAD 623

Query: 291 RLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
           ++F  +  +   PN   Y  +I G+CR  ++ +A +L + M   G  P  VT  ++++ L
Sbjct: 624 QVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVTIIALVKAL 683

Query: 349 CKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLM 405
             EG     N ++ ++       D      L+    K G+  +   +   M + G +
Sbjct: 684 YSEGMDEQLNLVIRDILRSCKLSDAELSKALVQINHKEGNIDAVFNLLTEMAKDGFL 740


>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Vitis vinifera]
          Length = 609

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 161/549 (29%), Positives = 275/549 (50%), Gaps = 43/549 (7%)

Query: 8   NSDTKFIKTISAIMLKGHWAKLLNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWA 67
           NS T    TIS ++ K HW+KL      + +  T    +L +L+N    P L   +FKW 
Sbjct: 43  NSHTFDTPTISQLIAKQHWSKL-----KTIVKETNPSSLLQHLFNSEAQPDLILCYFKWT 97

Query: 68  ESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPD 127
           +       H+++    ++H+L   K++   + +L+  A     S  ++ ++L  +     
Sbjct: 98  QKEFGAI-HNVEQFCRLLHLLANAKNYNKIRALLDSFAKNAHYSNSTIFHSLSVLGSWGC 156

Query: 128 GNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKV 187
            NS ++  LV  Y         L+ FD+   +       +C  +L SL K+    +V  V
Sbjct: 157 ANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESV 216

Query: 188 YKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCK 247
           YK+M++  +  N+  ++V+I+  CK     K   ++ +M+       + TYNT+I  YCK
Sbjct: 217 YKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCK 276

Query: 248 KGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVT 305
            G  ++A A+   M  + I P+ +T+N LI GFCR+  +  A+++F +++  G  PN VT
Sbjct: 277 AGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVT 336

Query: 306 YTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMN 365
           Y +LI+G C    L+EAL L++ M+  G+ P VVTYN+++   CK+  +++A  +L+++ 
Sbjct: 337 YNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIG 396

Query: 366 EKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCK----- 420
           ++ +AP+ +T NTLI+AY K G    A  +++ ML+ G+  +  TY  LI GFC+     
Sbjct: 397 KRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVK 456

Query: 421 -----AKEMD-------------------------IAKELLFGMLDAGFSPSYCSYSWLV 450
                AKEM+                          A  LL  M + G +PS+ +Y+ L+
Sbjct: 457 EARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALI 516

Query: 451 DGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGIL 510
           DGY  + N  A L +      +G   ++  Y  LI+ FC K K++ A RL N M   G++
Sbjct: 517 DGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLI 576

Query: 511 GDSVIYTSL 519
            +   Y  L
Sbjct: 577 PNRTTYDIL 585



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 107/342 (31%), Positives = 173/342 (50%), Gaps = 37/342 (10%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           Q    V + M+     P +     +++   K         + K+MV   +  N   +N+L
Sbjct: 246 QKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNIL 305

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           I   C+  +V   +K+  EM+ + ++ ++ TYN+LI   C  G   EAL +QD+M   G+
Sbjct: 306 IDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGL 365

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
            P++VTYN+LI+GFC++  ++EAR +  DI  +G  PN +T+ TLID Y +A  +++A  
Sbjct: 366 KPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFL 425

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           LR +M   GV P V TYN ++   C+EG +++A +L  EM    +  D VT N L++A C
Sbjct: 426 LRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALC 485

Query: 385 KIGDTASAMKVKNRMLEAGL---------MLDQF-------------------------- 409
           K G+T  A+++ + M E GL         ++D +                          
Sbjct: 486 KKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIV 545

Query: 410 TYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVD 451
           TY  LI GFC   +++ A  LL  ML+ G  P+  +Y  L D
Sbjct: 546 TYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRD 587



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 107/366 (29%), Positives = 191/366 (52%), Gaps = 2/366 (0%)

Query: 198 ANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAV 257
           AN  + ++L+ A  K+ ++D   +          R    + N ++    K+G      +V
Sbjct: 157 ANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESV 216

Query: 258 QDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCR 315
              M R  I  ++VT++ +I+G C+ G+ ++A  +  D+K  G +P+ +TY T+IDGYC+
Sbjct: 217 YKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCK 276

Query: 316 ANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVT 375
           A  + +A  L + M AK ++P  +T+N ++   C++  +  A ++  EM  + + P+ VT
Sbjct: 277 AGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVT 336

Query: 376 CNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGML 435
            N+LIN  C  G    A+ ++++M   GL  +  TY ALI+GFCK K +  A+E+L  + 
Sbjct: 337 YNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIG 396

Query: 436 DAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVD 495
             G +P+  +++ L+D Y      +    L    +  G+C +VS Y  LI  FC++  V 
Sbjct: 397 KRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVK 456

Query: 496 YAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFS 555
            A++L   M+GNG+  D V Y  L  A  + GE +    +LD+M+   L  +   Y +  
Sbjct: 457 EARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALI 516

Query: 556 ASYAKD 561
             Y ++
Sbjct: 517 DGYFRE 522



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 76/223 (34%), Positives = 115/223 (51%), Gaps = 2/223 (0%)

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           L+  +   KM ++  ++ D +    L P++     L+++  K    D  + +   M+  G
Sbjct: 375 LINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTG 434

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
           V  N+  YN LI   C+  +V +  KL  EME   ++ADL TYN L+   CKKG   +A+
Sbjct: 435 VCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAV 494

Query: 256 AVQDRMEREGISPDIVTYNSLIHGFCREGRMREAR--RLFRDIKGATPNHVTYTTLIDGY 313
            + D M   G++P  +TYN+LI G+ REG    A   R   + KG   N VTY  LI G+
Sbjct: 495 RLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGF 554

Query: 314 CRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRD 356
           C    LEEA RL   M  KG+ P   TY+ +  ++ ++G I D
Sbjct: 555 CNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKGFIPD 597



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 79/278 (28%), Positives = 130/278 (46%), Gaps = 2/278 (0%)

Query: 302 NHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLL 361
           N +    L+  Y +  +++ AL   +     G     ++ N +L  L KEGRI     + 
Sbjct: 158 NSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVY 217

Query: 362 NEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKA 421
            EM  ++I  + VT + +IN  CK+G    A  V   M   G      TY  +I G+CKA
Sbjct: 218 KEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKA 277

Query: 422 KEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVY 481
            +M  A  LL  M+     P+  +++ L+DG+C   N  A  K+ +E   +GL  +V  Y
Sbjct: 278 GKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTY 337

Query: 482 RALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
            +LI   C   K+D A  L + M G G+  + V Y +L   + +    K   ++LDD+ +
Sbjct: 338 NSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGK 397

Query: 542 RRLMITLKIYRSFSASYAKDNEILDLFW--SHVVDRGL 577
           R L   +  + +   +Y K   + D F   S ++D G+
Sbjct: 398 RGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGV 435


>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Glycine max]
          Length = 757

 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 148/498 (29%), Positives = 250/498 (50%), Gaps = 17/498 (3%)

Query: 63  FFKWAESAVPNYKHSLQSHWT--MIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALV 120
           F  WA++    +      H     +HIL + K +++A ++   +A    L  P+  +   
Sbjct: 59  FLTWAQAQAQAHNFFFTPHCKCLALHILVRFKLYRTAHSLAADLAAT--LPDPTGASLFR 116

Query: 121 KIHD------DPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNS 174
            +HD       P  +S V   +V   + L      L +      H   P + +   +L++
Sbjct: 117 HLHDTFHLCSSPFSSSAVFDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDA 176

Query: 175 L-----AKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFK 229
           L     +  R  D   +V++ MV+ GV  N++ YNV+I       D++K    + +ME +
Sbjct: 177 LLRRSSSNHRDYDDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKE 236

Query: 230 DVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA 289
            +  ++ TYNTLI   CKK    EA+A+   M   G++ ++++YNS+I+G C +GRM E 
Sbjct: 237 GISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEV 296

Query: 290 RRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRK 347
             L  ++  KG  P+ VTY TL++G+C+  +L + L L   M  KG+ P VVTY +++  
Sbjct: 297 GELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINC 356

Query: 348 LCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLD 407
           +CK G +  A  + ++M  + + P+  T  TLI+ +C+ G    A KV + M+ +G    
Sbjct: 357 MCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPS 416

Query: 408 QFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLD 467
             TY AL+HG+C    +  A  +L GM++ G  P   SYS ++ G+C +       ++ +
Sbjct: 417 VVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKE 476

Query: 468 EFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
           E V +G+  D   Y +LI+  C ++K+  A  LF  M   G+  D V YTSL  AY   G
Sbjct: 477 EMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDG 536

Query: 528 EPKACSDILDDMYRRRLM 545
           E      + D+M +R  +
Sbjct: 537 ELSKALRLHDEMVQRGFL 554



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 119/375 (31%), Positives = 196/375 (52%), Gaps = 2/375 (0%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           + GL    +M    + P++     L+++  K +       + + M   GV AN+  YN +
Sbjct: 224 EKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSV 283

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           I+  C    + +V +L+ EM  K +  D  TYNTL+  +CK+G  ++ L +   M  +G+
Sbjct: 284 INGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGL 343

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEALR 324
           SP++VTY +LI+  C+ G +  A  +F    ++G  PN  TYTTLIDG+C+   + EA +
Sbjct: 344 SPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYK 403

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           +   M   G  P VVTYN+++   C  GR+++A  +L  M E+ + PD V+ +T+I  +C
Sbjct: 404 VLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFC 463

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           +  +   A ++K  M+E G++ D  TY +LI G C  +++  A +L   M+  G  P   
Sbjct: 464 RERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEV 523

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
           +Y+ L++ YC        L+L DE V RG   D   Y  LI    KK +   A+RL   +
Sbjct: 524 TYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKL 583

Query: 505 QGNGILGDSVIYTSL 519
                + D V Y +L
Sbjct: 584 FYEESVPDDVTYNTL 598



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 136/466 (29%), Positives = 231/466 (49%), Gaps = 51/466 (10%)

Query: 68  ESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIAL----RDFLSTPSVLNALVKIH 123
           E   PN    + ++ T+I    K K  K A  +L  +A+     + +S  SV+N L    
Sbjct: 236 EGISPN----VVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLC--- 288

Query: 124 DDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDM 183
                               +M++ G ++ ++MR   L+P       L+N   K+     
Sbjct: 289 -----------------GKGRMSEVG-ELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQ 330

Query: 184 VWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIA 243
              +  +MV  G+  N+  Y  LI+  CK+ ++ +  ++  +M  + +R +  TY TLI 
Sbjct: 331 GLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLID 390

Query: 244 LYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATP 301
            +C+KG+  EA  V   M   G SP +VTYN+L+HG+C  GR++EA  + R +  +G  P
Sbjct: 391 GFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPP 450

Query: 302 NHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLL 361
           + V+Y+T+I G+CR  +L +A +++E M  KGV P  VTY+S+++ LC + ++ +A  L 
Sbjct: 451 DVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLF 510

Query: 362 NEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKA 421
            EM  + + PD VT  +LINAYC  G+ + A+++ + M++ G + D  TY  LI+G  K 
Sbjct: 511 REMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKK 570

Query: 422 KEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVY 481
               +AK LL  +      P   +Y+ L++  C+ N          EF S          
Sbjct: 571 ARTKVAKRLLLKLFYEESVPDDVTYNTLIEN-CSNN----------EFKS---------V 610

Query: 482 RALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
             L++ FC K  ++ A R+F  M       ++ IY  + + + R G
Sbjct: 611 EGLVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRGG 656



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 112/361 (31%), Positives = 177/361 (49%), Gaps = 39/361 (10%)

Query: 261 MEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRAND 318
           M R G+SP++ TYN +I G   +G + +     R ++  G +PN VTY TLID  C+   
Sbjct: 198 MVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKK 257

Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT 378
           ++EA+ L   MA  GV   +++YNS++  LC +GR+ +   L+ EM  K + PD VT NT
Sbjct: 258 VKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNT 317

Query: 379 LINAY-----------------------------------CKIGDTASAMKVKNRMLEAG 403
           L+N +                                   CK G+ + A+++ ++M   G
Sbjct: 318 LVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRG 377

Query: 404 LMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALL 463
           L  ++ TY  LI GFC+   M+ A ++L  M+ +GFSPS  +Y+ LV GYC     +  +
Sbjct: 378 LRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAV 437

Query: 464 KLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAY 523
            +L   V RGL  DV  Y  +I  FC++ ++  A ++   M   G+L D+V Y+SL    
Sbjct: 438 GILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGL 497

Query: 524 WRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSH--VVDRGLMSKH 581
               +     D+  +M RR L      Y S   +Y  D E+      H  +V RG +  +
Sbjct: 498 CLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDN 557

Query: 582 I 582
           +
Sbjct: 558 V 558



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 112/386 (29%), Positives = 191/386 (49%), Gaps = 17/386 (4%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           +++FDQMRV  L P+    T L++   +  L +  +KV  +M+  G   ++  YN L+H 
Sbjct: 367 VEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHG 426

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
            C    V +   +L  M  + +  D+ +Y+T+IA +C++    +A  +++ M  +G+ PD
Sbjct: 427 YCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPD 486

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLRE 327
            VTY+SLI G C + ++ EA  LFR++  +G  P+ VTYT+LI+ YC   +L +ALRL +
Sbjct: 487 TVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHD 546

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN------ 381
            M  +G  P  VTY+ ++  L K+ R + A RLL ++  ++  PD+VT NTLI       
Sbjct: 547 EMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIENCSNNE 606

Query: 382 ---------AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLF 432
                     +C  G    A +V   ML+     +   Y  +IHG  +   +  A  L  
Sbjct: 607 FKSVEGLVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRGGNVHKAYNLYM 666

Query: 433 GMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKE 492
            +  + F+    +   LV     +   + L +LL   +      D  V + L+    K+ 
Sbjct: 667 ELEHSSFACHTVAVIALVKALAREGMNDELSRLLQNILRSCRLNDAKVAKVLVEVNFKEG 726

Query: 493 KVDYAQRLFNLMQGNGILGDSVIYTS 518
            +D    +   M  +G+L D  I++S
Sbjct: 727 NMDAVLNVLTEMAKDGLLPDGGIHSS 752



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 102/440 (23%), Positives = 181/440 (41%), Gaps = 45/440 (10%)

Query: 20  IMLKGHWAKLLNPNIASSLTSTAIHKVLLNLYNC-CHIPSLSCAFFKWAESAVPNYKHSL 78
           ++L     K L+PN+ +  T          L NC C   +LS A   + +  V   + + 
Sbjct: 333 VLLSEMVGKGLSPNVVTYTT----------LINCMCKAGNLSRAVEIFDQMRVRGLRPNE 382

Query: 79  QSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVI 138
           +++ T+I    +      A  +L ++ +  F  +PSV+     +H               
Sbjct: 383 RTYTTLIDGFCQKGLMNEAYKVLSEMIVSGF--SPSVVTYNALVHG-------------- 426

Query: 139 FYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVA 198
            Y  L   Q+ + +   M    L P + + + ++    ++R     +++ ++MV+ GV+ 
Sbjct: 427 -YCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLP 485

Query: 199 NIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQ 258
           +   Y+ LI   C    + +   L  EM  + +  D  TY +LI  YC  G   +AL + 
Sbjct: 486 DTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLH 545

Query: 259 DRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLID----- 311
           D M + G  PD VTY+ LI+G  ++ R + A+RL   +  + + P+ VTY TLI+     
Sbjct: 546 DEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIENCSNN 605

Query: 312 ----------GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLL 361
                     G+C    + EA R+ + M  +   P    YN ++    + G +  A  L 
Sbjct: 606 EFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRGGNVHKAYNLY 665

Query: 362 NEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKA 421
            E+     A   V    L+ A  + G      ++   +L +  + D    K L+    K 
Sbjct: 666 MELEHSSFACHTVAVIALVKALAREGMNDELSRLLQNILRSCRLNDAKVAKVLVEVNFKE 725

Query: 422 KEMDIAKELLFGMLDAGFSP 441
             MD    +L  M   G  P
Sbjct: 726 GNMDAVLNVLTEMAKDGLLP 745



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 66/254 (25%), Positives = 112/254 (44%), Gaps = 5/254 (1%)

Query: 306 YTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIR-----DANRL 360
           +  ++    R   + +AL L  +    G  P V++YN++L  L +          DA R+
Sbjct: 135 FDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRDYDDAERV 194

Query: 361 LNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCK 420
             +M    ++P+  T N +I      GD    +    +M + G+  +  TY  LI   CK
Sbjct: 195 FRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCK 254

Query: 421 AKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSV 480
            K++  A  LL  M   G + +  SY+ +++G C K     + +L++E   +GL  D   
Sbjct: 255 KKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVT 314

Query: 481 YRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMY 540
           Y  L+  FCK+  +     L + M G G+  + V YT+L     +AG      +I D M 
Sbjct: 315 YNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMR 374

Query: 541 RRRLMITLKIYRSF 554
            R L    + Y + 
Sbjct: 375 VRGLRPNERTYTTL 388



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/158 (22%), Positives = 71/158 (44%), Gaps = 2/158 (1%)

Query: 422 KEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVY 481
           ++ D A+ +   M+  G SP+  +Y+ ++ G  ++ + E  L  + +    G+  +V  Y
Sbjct: 186 RDYDDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTY 245

Query: 482 RALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
             LI   CKK+KV  A  L   M   G+  + + Y S+       G      +++++M  
Sbjct: 246 NTLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRG 305

Query: 542 RRLMITLKIYRSFSASYAKDNEILD--LFWSHVVDRGL 577
           + L+     Y +    + K+  +    +  S +V +GL
Sbjct: 306 KGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGL 343


>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 999

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 161/495 (32%), Positives = 248/495 (50%), Gaps = 12/495 (2%)

Query: 63  FFKWAES--AVPNYKHSLQSHWTMIHI-LTKNKHFKSAQNMLEKIALRDFLSTPSVLNAL 119
           FF W+ S  + P Y HS    ++++ I L  +     A NMLEK+ L+       +L++L
Sbjct: 106 FFHWSSSKMSTPQYLHS----YSILAIRLCNSGLIHQADNMLEKL-LQTRKPPLEILDSL 160

Query: 120 VKIHDDPDG-NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKD 178
           V+ + +  G N  V    +  +  L    +   VF         P L  C  L+  L K 
Sbjct: 161 VRCYREFGGSNLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKA 220

Query: 179 RLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTY 238
            +  + WKVY  MV+  +V +++ Y  +I A CK  DV K + +L EME K+ + +LFTY
Sbjct: 221 NMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEME-KECKPNLFTY 279

Query: 239 NTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI-- 296
           N  I   C+ G   EAL V+  M  +G+ PD  TY  L+ GFC++ R +EA+ +F  +  
Sbjct: 280 NAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPS 339

Query: 297 KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRD 356
            G  PN  TYT LIDG+ +  ++EEALR+++ M  +G+   VVTYN+++  + K G +  
Sbjct: 340 SGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAK 399

Query: 357 ANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIH 416
           A  L NEM    I PD  T N LI+ Y K  D A A ++   M    L    FTY  LI 
Sbjct: 400 AMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLIS 459

Query: 417 GFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCV 476
           G C + ++  A E+L  M+  G  P+   Y  L+  Y  ++  E  ++LL   ++ G+  
Sbjct: 460 GLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLP 519

Query: 477 DVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDIL 536
           D+  Y  LI   C+ +KV+ A+ L   M   GI  ++  Y +    Y ++GE +      
Sbjct: 520 DLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYF 579

Query: 537 DDMYRRRLMITLKIY 551
            DM    ++    IY
Sbjct: 580 KDMLSSGIVPNNVIY 594



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 126/425 (29%), Positives = 205/425 (48%), Gaps = 7/425 (1%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           Q   +V DQM  + + P++     L+ +  ++   +M  ++ K M+  GV+ ++  YN L
Sbjct: 468 QKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCL 527

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           I   C++  V++ + LL +M  K ++ +  TY   I LY K G    A      M   GI
Sbjct: 528 IIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGI 587

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
            P+ V Y  LI G C  G   EA   F+ +  KG  P+   Y+ +I    +    +EA+ 
Sbjct: 588 VPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMG 647

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN--A 382
           +       GV P V  YNS++   CKEG I  A++L +EM    I P+ V  NTLIN   
Sbjct: 648 VFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYG 707

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL-LFGMLDAGFSP 441
           YCK G+   A K+ + M+  G+  D + Y  LI G C  KE ++ K L LF         
Sbjct: 708 YCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDG-C-GKEGNLEKALSLFHEAQQKSVG 765

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
           S  +++ L+D +C         +L D+ V + L  ++  Y  LI  + K E ++ A++LF
Sbjct: 766 SLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLF 825

Query: 502 NLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKD 561
             M+   I+ +++ YTSL  +Y + G       +  DM  R +      Y   +++Y K+
Sbjct: 826 LDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKE 885

Query: 562 NEILD 566
            + L+
Sbjct: 886 GKSLE 890



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 114/436 (26%), Positives = 202/436 (46%), Gaps = 6/436 (1%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           + L+V   M    L P  H  T+L++   K + +     +++ M   G+  N   Y  LI
Sbjct: 294 EALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALI 353

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
               K  ++++  ++  EM  + ++ ++ TYN +I    K G   +A+++ + M   GI 
Sbjct: 354 DGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIE 413

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDIKG--ATPNHVTYTTLIDGYCRANDLEEALRL 325
           PD  TYN LI G+ +   M +A  L  ++K    TP+  TY+ LI G C ++DL++A  +
Sbjct: 414 PDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEV 473

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
            + M   GV P V  Y ++++   +E R   A  LL  M    + PD    N LI   C+
Sbjct: 474 LDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCR 533

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
                 A  +   M E G+  +  TY A I+ + K+ E+ +A+     ML +G  P+   
Sbjct: 534 AKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVI 593

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+ L+ G+C+  N    L      + +GL  D+  Y A+I    K  K   A  +F    
Sbjct: 594 YTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFL 653

Query: 506 GNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSF--SASYAKDNE 563
             G++ D  +Y SL   + + G+ +  S + D+M    +   + +Y +      Y K   
Sbjct: 654 KTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGN 713

Query: 564 ILDLF--WSHVVDRGL 577
           + + F  +  ++ +G+
Sbjct: 714 LTEAFKLFDEMISKGI 729



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 113/419 (26%), Positives = 204/419 (48%), Gaps = 7/419 (1%)

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           L+I     K  ++   +   M    + P+ H     +N  +K     +  + +K M+  G
Sbjct: 527 LIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSG 586

Query: 196 VVANIHLYNVLIHACCKSSD-VDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEA 254
           +V N  +Y +LI   C   + V+ +    C +E K +  D+  Y+ +I    K G   EA
Sbjct: 587 IVPNNVIYTILIKGHCDVGNTVEALSTFKCMLE-KGLIPDIRAYSAIIHSLSKNGKTKEA 645

Query: 255 LAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLID- 311
           + V  +  + G+ PD+  YNSLI GFC+EG + +A +L+ ++   G  PN V Y TLI+ 
Sbjct: 646 MGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLIND 705

Query: 312 -GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIA 370
            GYC++ +L EA +L + M +KG+ P    Y  ++    KEG +  A  L +E  +K + 
Sbjct: 706 YGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVG 765

Query: 371 PDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL 430
             +   N+LI+++CK G    A ++ + M++  L  +  TY  LI  + KA+ M+ A++L
Sbjct: 766 SLSAF-NSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQL 824

Query: 431 LFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCK 490
              M      P+  +Y+ L+  Y    N   ++ L  +  +RG+  D   Y  +   +CK
Sbjct: 825 FLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCK 884

Query: 491 KEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLK 549
           + K   A +L N     GI  +  ++ +L +   +  +     ++L +M +  L ++ K
Sbjct: 885 EGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSK 943



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 111/417 (26%), Positives = 200/417 (47%), Gaps = 5/417 (1%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N+H     +  Y+     Q   + F  M    ++P+    T+L+        T      +
Sbjct: 555 NAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTF 614

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
           K M++ G++ +I  Y+ +IH+  K+    +   +  +     V  D+F YN+LI+ +CK+
Sbjct: 615 KCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKE 674

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLI--HGFCREGRMREARRLFRDI--KGATPNHV 304
           G   +A  + D M   GI+P+IV YN+LI  +G+C+ G + EA +LF ++  KG +P+  
Sbjct: 675 GDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGY 734

Query: 305 TYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM 364
            Y  LIDG  +  +LE+AL L      K V   +  +NS++   CK G++ +A  L ++M
Sbjct: 735 IYCILIDGCGKEGNLEKALSLFHEAQQKSV-GSLSAFNSLIDSFCKHGKVIEARELFDDM 793

Query: 365 NEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEM 424
            +KK+ P+ VT   LI+AY K      A ++   M    ++ +  TY +L+  + +    
Sbjct: 794 VDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNR 853

Query: 425 DIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRAL 484
                L   M   G +    +Y  +   YC +      LKLL++ +  G+ ++  V+ AL
Sbjct: 854 FKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDAL 913

Query: 485 IRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
           I   CK++++     L + M    +   S    +L   ++++G     S +L  M R
Sbjct: 914 IFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQR 970



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 109/392 (27%), Positives = 187/392 (47%), Gaps = 3/392 (0%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N+ + + L+  + ++  T + L  F  M    L+P + A + +++SL+K+  T     V+
Sbjct: 590 NNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVF 649

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIA--LYC 246
            K ++ GVV ++ LYN LI   CK  D++K  +L  EM    +  ++  YNTLI    YC
Sbjct: 650 LKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYC 709

Query: 247 KKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGATPNHVT- 305
           K G   EA  + D M  +GISPD   Y  LI G  +EG + +A  LF + +  +   ++ 
Sbjct: 710 KSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSA 769

Query: 306 YTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMN 365
           + +LID +C+   + EA  L + M  K + P +VTY  ++    K   + +A +L  +M 
Sbjct: 770 FNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDME 829

Query: 366 EKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMD 425
            + I P+ +T  +L+ +Y +IG+    + +   M   G+  D   Y  +   +CK  +  
Sbjct: 830 TRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSL 889

Query: 426 IAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
            A +LL   L  G       +  L+   C +     +L+LL E     L +       L+
Sbjct: 890 EALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLL 949

Query: 486 RRFCKKEKVDYAQRLFNLMQGNGILGDSVIYT 517
             F K    D A ++  +MQ  G +  S+  T
Sbjct: 950 LGFYKSGNEDEASKVLGVMQRLGWVPTSLSLT 981


>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 152/554 (27%), Positives = 275/554 (49%), Gaps = 19/554 (3%)

Query: 33  NIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTM---IHILT 89
            + SSLT + I + LLNL+     P +   F         ++ H L    T+   I I+ 
Sbjct: 59  QVESSLTPSLISQTLLNLHES---PQVVLDFLN-------HFHHKLSDARTLCLAIVIVA 108

Query: 90  KNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDG--NSHVLSWLVIFYANLKMTQ 147
           +    K A ++L++       ++   +   +    D  G  +S V  +L+    ++    
Sbjct: 109 RLPSPKPALHLLKQALGGGTTNSIREIFEFLAASRDRLGFKSSIVFDYLIKSCCDMNRAD 168

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           +  + F  M+   ++P +  C  LL+   K   T+  W +Y +M +L + ++++ +N++I
Sbjct: 169 EAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMI 228

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           +  CK   + K +  +  ME   V+ ++ TYNT++  YC  G    A A+   M+R+ I 
Sbjct: 229 NVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIE 288

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
           PD  TY SLI G C++GR+ EA ++F ++  KG  P+ V Y TLIDG+C   +L+ A   
Sbjct: 289 PDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAY 348

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
           ++ M  KG+ P + TYNS++  L  E R  +A  ++ E+ EK I+PD +T N LIN YC+
Sbjct: 349 KDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCR 408

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
             +   A  + + ML +G+   + TY +L+H   K   M  A +L   +   G  P    
Sbjct: 409 CANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIM 468

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           ++ L+DG+C+ +N +   +LL +     +  D   +  +++  C++ KV+ A+ LF+ M+
Sbjct: 469 FNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMK 528

Query: 506 GNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNE-- 563
             GI  D + + +L   Y R G+ K    + ++M       T+  Y +      K+ E  
Sbjct: 529 RRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGD 588

Query: 564 ILDLFWSHVVDRGL 577
           + +     +V +G+
Sbjct: 589 LAEELLKEMVSKGM 602



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 104/313 (33%), Positives = 168/313 (53%), Gaps = 2/313 (0%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           ++  ++F++M    L P       L++        DM      +M++ G+   +  YN L
Sbjct: 308 EEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSL 367

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           IHA       D+ E ++ E++ K +  D  TYN LI  YC+     +A  + D M   GI
Sbjct: 368 IHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGI 427

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
            P   TY SL+H   ++ RM+EA  LF+ I  +G  P+ + +  LIDG+C  ++++ A  
Sbjct: 428 KPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFE 487

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           L + M    V P  VT+N+I++  C+EG++ +A  L +EM  + I PD+++ NTLI+ Y 
Sbjct: 488 LLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYS 547

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           + GD   A +V+N ML+ G      TY AL+ G CK +E D+A+ELL  M+  G +P   
Sbjct: 548 RRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDT 607

Query: 445 SYSWLVDGYCNKN 457
           +Y  L++G    N
Sbjct: 608 TYFTLIEGIAKVN 620



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 67/282 (23%), Positives = 125/282 (44%), Gaps = 54/282 (19%)

Query: 77  SLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWL 136
           ++ ++ ++IH L   +    A+ M+++I  +                  PD  ++  + L
Sbjct: 360 TMSTYNSLIHALFMEQRTDEAECMIKEIQEKGI---------------SPDAITY--NIL 402

Query: 137 VIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGV 196
           +  Y      +    + D+M    + P     T LL+ L+K         ++KK+   GV
Sbjct: 403 INGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGV 462

Query: 197 VANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALA 256
           + ++ ++N LI   C +S+V    +LL +M+   V  D  T+NT++  +C++G   EA  
Sbjct: 463 LPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARE 522

Query: 257 VQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI-------------------- 296
           + D M+R GI PD +++N+LI G+ R G +++A R+  ++                    
Sbjct: 523 LFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLC 582

Query: 297 -----------------KGATPNHVTYTTLIDGYCRANDLEE 321
                            KG TP+  TY TLI+G  + N  +E
Sbjct: 583 KNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDE 624


>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g05670, mitochondrial; Flags: Precursor
 gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
 gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
          Length = 741

 Score =  248 bits (633), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 152/509 (29%), Positives = 252/509 (49%), Gaps = 10/509 (1%)

Query: 63  FFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFL----STPSVLNA 118
           FF WA S       +L+S   +IH+   +K  K AQ+++     R  L    S     + 
Sbjct: 107 FFDWARS---RRDSNLESLCIVIHLAVASKDLKVAQSLISSFWERPKLNVTDSFVQFFDL 163

Query: 119 LVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKD 178
           LV  + D   +  V         +  + ++  +VF++M  + L+  + +C V L  L+KD
Sbjct: 164 LVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKD 223

Query: 179 -RLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFT 237
              T     V+++  ++GV  N+  YN++IH  C+   + +   LL  ME K    D+ +
Sbjct: 224 CYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVIS 283

Query: 238 YNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI- 296
           Y+T++  YC+ G   +   + + M+R+G+ P+   Y S+I   CR  ++ EA   F ++ 
Sbjct: 284 YSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMI 343

Query: 297 -KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIR 355
            +G  P+ V YTTLIDG+C+  D+  A +    M ++ + P V+TY +I+   C+ G + 
Sbjct: 344 RQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMV 403

Query: 356 DANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALI 415
           +A +L +EM  K + PD+VT   LIN YCK G    A +V N M++AG   +  TY  LI
Sbjct: 404 EAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLI 463

Query: 416 HGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLC 475
            G CK  ++D A ELL  M   G  P+  +Y+ +V+G C   N E  +KL+ EF + GL 
Sbjct: 464 DGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLN 523

Query: 476 VDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDI 535
            D   Y  L+  +CK  ++D AQ +   M G G+    V +  L   +   G  +    +
Sbjct: 524 ADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKL 583

Query: 536 LDDMYRRRLMITLKIYRSFSASYAKDNEI 564
           L+ M  + +      + S    Y   N +
Sbjct: 584 LNWMLAKGIAPNATTFNSLVKQYCIRNNL 612



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 123/413 (29%), Positives = 218/413 (52%), Gaps = 2/413 (0%)

Query: 156 MRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSD 215
           M +    P + + + ++N   +    D VWK+ + M + G+  N ++Y  +I   C+   
Sbjct: 272 MELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICK 331

Query: 216 VDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNS 275
           + + E+   EM  + +  D   Y TLI  +CK+G    A      M    I+PD++TY +
Sbjct: 332 LAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTA 391

Query: 276 LIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKG 333
           +I GFC+ G M EA +LF ++  KG  P+ VT+T LI+GYC+A  +++A R+   M   G
Sbjct: 392 IISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAG 451

Query: 334 VYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAM 393
             P VVTY +++  LCKEG +  AN LL+EM +  + P+  T N+++N  CK G+   A+
Sbjct: 452 CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 511

Query: 394 KVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGY 453
           K+      AGL  D  TY  L+  +CK+ EMD A+E+L  ML  G  P+  +++ L++G+
Sbjct: 512 KLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGF 571

Query: 454 CNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDS 513
           C     E   KLL+  +++G+  + + + +L++++C +  +  A  ++  M   G+  D 
Sbjct: 572 CLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDG 631

Query: 514 VIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
             Y +L   + +A   K    +  +M  +   +++  Y      + K  + L+
Sbjct: 632 KTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLE 684



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 151/537 (28%), Positives = 258/537 (48%), Gaps = 23/537 (4%)

Query: 26  WAKLLNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMI 85
           + K+LN  +  S+ S  ++   L+  +C    +    F ++ E  V     ++ S+  +I
Sbjct: 198 FEKMLNYGLVLSVDSCNVYLTRLS-KDCYKTATAIIVFREFPEVGVC---WNVASYNIVI 253

Query: 86  HILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKM 145
           H + +    K A ++L  + L+ +  TP V++                S +V  Y     
Sbjct: 254 HFVCQLGRIKEAHHLLLLMELKGY--TPDVIS---------------YSTVVNGYCRFGE 296

Query: 146 TQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNV 205
                ++ + M+   L P+ +    ++  L +        + + +M++ G++ +  +Y  
Sbjct: 297 LDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTT 356

Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
           LI   CK  D+    K   EM  +D+  D+ TY  +I+ +C+ G   EA  +   M  +G
Sbjct: 357 LIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG 416

Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEAL 323
           + PD VT+  LI+G+C+ G M++A R+   +   G +PN VTYTTLIDG C+  DL+ A 
Sbjct: 417 LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSAN 476

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
            L   M   G+ P + TYNSI+  LCK G I +A +L+ E     +  D VT  TL++AY
Sbjct: 477 ELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAY 536

Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY 443
           CK G+   A ++   ML  GL     T+  L++GFC    ++  ++LL  ML  G +P+ 
Sbjct: 537 CKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNA 596

Query: 444 CSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNL 503
            +++ LV  YC +NN +A   +  +  SRG+  D   Y  L++  CK   +  A  LF  
Sbjct: 597 TTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQE 656

Query: 504 MQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAK 560
           M+G G       Y+ L   + +  +     ++ D M R  L    +I+  FS +  K
Sbjct: 657 MKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYK 713



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/227 (25%), Positives = 111/227 (48%), Gaps = 1/227 (0%)

Query: 341 YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK-IGDTASAMKVKNRM 399
           ++   + L   G +R+A R+  +M    +     +CN  +    K    TA+A+ V    
Sbjct: 178 FDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREF 237

Query: 400 LEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNE 459
            E G+  +  +Y  +IH  C+   +  A  LL  M   G++P   SYS +V+GYC     
Sbjct: 238 PEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGEL 297

Query: 460 EALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
           + + KL++    +GL  +  +Y ++I   C+  K+  A+  F+ M   GIL D+V+YT+L
Sbjct: 298 DKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTL 357

Query: 520 AYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
              + + G+ +A S    +M+ R +   +  Y +  + + +  ++++
Sbjct: 358 IDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVE 404



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 59/254 (23%), Positives = 105/254 (41%), Gaps = 1/254 (0%)

Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEG-RIRDANRLLNEMNEKKIAPDNVTCN 377
           L EA R+ E M   G+   V + N  L +L K+  +   A  +  E  E  +  +  + N
Sbjct: 191 LREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYN 250

Query: 378 TLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA 437
            +I+  C++G    A  +   M   G   D  +Y  +++G+C+  E+D   +L+  M   
Sbjct: 251 IVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRK 310

Query: 438 GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYA 497
           G  P+   Y  ++   C         +   E + +G+  D  VY  LI  FCK+  +  A
Sbjct: 311 GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAA 370

Query: 498 QRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSAS 557
            + F  M    I  D + YT++   + + G+      +  +M+ + L      +      
Sbjct: 371 SKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELING 430

Query: 558 YAKDNEILDLFWSH 571
           Y K   + D F  H
Sbjct: 431 YCKAGHMKDAFRVH 444


>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
            thaliana]
          Length = 1184

 Score =  248 bits (633), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 152/509 (29%), Positives = 252/509 (49%), Gaps = 10/509 (1%)

Query: 63   FFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFL----STPSVLNA 118
            FF WA S       +L+S   +IH+   +K  K AQ+++     R  L    S     + 
Sbjct: 550  FFDWARS---RRDSNLESLCIVIHLAVASKDLKVAQSLISSFWERPKLNVTDSFVQFFDL 606

Query: 119  LVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKD 178
            LV  + D   +  V         +  + ++  +VF++M  + L+  + +C V L  L+KD
Sbjct: 607  LVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKD 666

Query: 179  -RLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFT 237
               T     V+++  ++GV  N+  YN++IH  C+   + +   LL  ME K    D+ +
Sbjct: 667  CYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVIS 726

Query: 238  YNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI- 296
            Y+T++  YC+ G   +   + + M+R+G+ P+   Y S+I   CR  ++ EA   F ++ 
Sbjct: 727  YSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMI 786

Query: 297  -KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIR 355
             +G  P+ V YTTLIDG+C+  D+  A +    M ++ + P V+TY +I+   C+ G + 
Sbjct: 787  RQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMV 846

Query: 356  DANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALI 415
            +A +L +EM  K + PD+VT   LIN YCK G    A +V N M++AG   +  TY  LI
Sbjct: 847  EAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLI 906

Query: 416  HGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLC 475
             G CK  ++D A ELL  M   G  P+  +Y+ +V+G C   N E  +KL+ EF + GL 
Sbjct: 907  DGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLN 966

Query: 476  VDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDI 535
             D   Y  L+  +CK  ++D AQ +   M G G+    V +  L   +   G  +    +
Sbjct: 967  ADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKL 1026

Query: 536  LDDMYRRRLMITLKIYRSFSASYAKDNEI 564
            L+ M  + +      + S    Y   N +
Sbjct: 1027 LNWMLAKGIAPNATTFNSLVKQYCIRNNL 1055



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 123/413 (29%), Positives = 218/413 (52%), Gaps = 2/413 (0%)

Query: 156  MRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSD 215
            M +    P + + + ++N   +    D VWK+ + M + G+  N ++Y  +I   C+   
Sbjct: 715  MELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICK 774

Query: 216  VDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNS 275
            + + E+   EM  + +  D   Y TLI  +CK+G    A      M    I+PD++TY +
Sbjct: 775  LAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTA 834

Query: 276  LIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKG 333
            +I GFC+ G M EA +LF ++  KG  P+ VT+T LI+GYC+A  +++A R+   M   G
Sbjct: 835  IISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAG 894

Query: 334  VYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAM 393
              P VVTY +++  LCKEG +  AN LL+EM +  + P+  T N+++N  CK G+   A+
Sbjct: 895  CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 954

Query: 394  KVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGY 453
            K+      AGL  D  TY  L+  +CK+ EMD A+E+L  ML  G  P+  +++ L++G+
Sbjct: 955  KLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGF 1014

Query: 454  CNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDS 513
            C     E   KLL+  +++G+  + + + +L++++C +  +  A  ++  M   G+  D 
Sbjct: 1015 CLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDG 1074

Query: 514  VIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
              Y +L   + +A   K    +  +M  +   +++  Y      + K  + L+
Sbjct: 1075 KTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLE 1127



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 151/537 (28%), Positives = 258/537 (48%), Gaps = 23/537 (4%)

Query: 26   WAKLLNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMI 85
            + K+LN  +  S+ S  ++   L+  +C    +    F ++ E  V     ++ S+  +I
Sbjct: 641  FEKMLNYGLVLSVDSCNVYLTRLS-KDCYKTATAIIVFREFPEVGV---CWNVASYNIVI 696

Query: 86   HILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKM 145
            H + +    K A ++L  + L+ +  TP V++                S +V  Y     
Sbjct: 697  HFVCQLGRIKEAHHLLLLMELKGY--TPDVIS---------------YSTVVNGYCRFGE 739

Query: 146  TQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNV 205
                 ++ + M+   L P+ +    ++  L +        + + +M++ G++ +  +Y  
Sbjct: 740  LDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTT 799

Query: 206  LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
            LI   CK  D+    K   EM  +D+  D+ TY  +I+ +C+ G   EA  +   M  +G
Sbjct: 800  LIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG 859

Query: 266  ISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEAL 323
            + PD VT+  LI+G+C+ G M++A R+   +   G +PN VTYTTLIDG C+  DL+ A 
Sbjct: 860  LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSAN 919

Query: 324  RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
             L   M   G+ P + TYNSI+  LCK G I +A +L+ E     +  D VT  TL++AY
Sbjct: 920  ELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAY 979

Query: 384  CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY 443
            CK G+   A ++   ML  GL     T+  L++GFC    ++  ++LL  ML  G +P+ 
Sbjct: 980  CKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNA 1039

Query: 444  CSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNL 503
             +++ LV  YC +NN +A   +  +  SRG+  D   Y  L++  CK   +  A  LF  
Sbjct: 1040 TTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQE 1099

Query: 504  MQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAK 560
            M+G G       Y+ L   + +  +     ++ D M R  L    +I+  FS +  K
Sbjct: 1100 MKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYK 1156



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/227 (25%), Positives = 111/227 (48%), Gaps = 1/227 (0%)

Query: 341 YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK-IGDTASAMKVKNRM 399
           ++   + L   G +R+A R+  +M    +     +CN  +    K    TA+A+ V    
Sbjct: 621 FDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREF 680

Query: 400 LEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNE 459
            E G+  +  +Y  +IH  C+   +  A  LL  M   G++P   SYS +V+GYC     
Sbjct: 681 PEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGEL 740

Query: 460 EALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
           + + KL++    +GL  +  +Y ++I   C+  K+  A+  F+ M   GIL D+V+YT+L
Sbjct: 741 DKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTL 800

Query: 520 AYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
              + + G+ +A S    +M+ R +   +  Y +  + + +  ++++
Sbjct: 801 IDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVE 847



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 59/254 (23%), Positives = 105/254 (41%), Gaps = 1/254 (0%)

Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEG-RIRDANRLLNEMNEKKIAPDNVTCN 377
           L EA R+ E M   G+   V + N  L +L K+  +   A  +  E  E  +  +  + N
Sbjct: 634 LREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYN 693

Query: 378 TLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA 437
            +I+  C++G    A  +   M   G   D  +Y  +++G+C+  E+D   +L+  M   
Sbjct: 694 IVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRK 753

Query: 438 GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYA 497
           G  P+   Y  ++   C         +   E + +G+  D  VY  LI  FCK+  +  A
Sbjct: 754 GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAA 813

Query: 498 QRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSAS 557
            + F  M    I  D + YT++   + + G+      +  +M+ + L      +      
Sbjct: 814 SKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELING 873

Query: 558 YAKDNEILDLFWSH 571
           Y K   + D F  H
Sbjct: 874 YCKAGHMKDAFRVH 887


>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 762

 Score =  248 bits (633), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 146/495 (29%), Positives = 251/495 (50%), Gaps = 12/495 (2%)

Query: 58  SLSCAFFKWAESAVPNYKHSLQSHWT--MIHILTKNKHFKSAQNMLEKIALR-DFLSTPS 114
           +L+  F  WA +  P +     SH     +HILT+ K +K+AQ + +++AL     S  S
Sbjct: 72  TLTLKFLTWARNH-PFF----DSHCKCLSLHILTRFKLYKTAQTLAQELALSASDPSGSS 126

Query: 115 VLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNS 174
           +   L   +   + +S V   +V  Y++L M    +   +  +    MP + +   +L++
Sbjct: 127 IFQCLKDSYHVYNSSSAVFDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDA 186

Query: 175 LAKDR--LTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVR 232
           + + R  +     +VY++M++  V  N++ YN+LI   C   ++ K      EME     
Sbjct: 187 IVRSRGSVKLSAEEVYREMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCL 246

Query: 233 ADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRL 292
            ++ TYNTLI  YCK G   EA  +   M  +G+ P++++YN +I+G CREG M+EA  +
Sbjct: 247 PNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEI 306

Query: 293 FRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
             ++  KG TP+ VTY TL++GYC+  +  +AL +   M   GV P VVTY +++  +CK
Sbjct: 307 LEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCK 366

Query: 351 EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
              +  A    ++M  + + P+  T  TLI+ + + G    A ++ N M E+G      T
Sbjct: 367 ARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVT 426

Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFV 470
           Y A IHG C  + M+ A  ++  M++ G +P   SYS ++ G+C K   +   ++  E V
Sbjct: 427 YNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMV 486

Query: 471 SRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPK 530
            +G+  D   Y +LI+  C+  ++  A  L   M   G+  D   YT+L  AY   G+  
Sbjct: 487 EKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLN 546

Query: 531 ACSDILDDMYRRRLM 545
               + D+M  +  +
Sbjct: 547 KALHLHDEMIHKGFL 561



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 135/413 (32%), Positives = 215/413 (52%), Gaps = 6/413 (1%)

Query: 110 LSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACT 169
           LS   V   +++    P  N +  + L+  + ++   Q GL  F +M  +  +P++    
Sbjct: 196 LSAEEVYREMIRSRVSP--NVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYN 253

Query: 170 VLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFK 229
            L+++  K    D  + + K M   G+  N+  YNV+I+  C+   + +  ++L EM +K
Sbjct: 254 TLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYK 313

Query: 230 DVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA 289
               D  TYNTL+  YCK+G  ++AL +   M R G+SP +VTY +LI+  C+   +  A
Sbjct: 314 GFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRA 373

Query: 290 RRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRK 347
              F    I+G  PN  TYTTLIDG+ R   L EA R+   M   G  P VVTYN+ +  
Sbjct: 374 MEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHG 433

Query: 348 LCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLD 407
            C   R+ +A  ++ EM EK +APD V+ +T+I+ +C+ G+   A ++K  M+E G+  D
Sbjct: 434 HCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPD 493

Query: 408 QFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLD 467
             TY +LI G C+ + +  A +L   MLD G  P   +Y+ L++ YC + +    L L D
Sbjct: 494 AVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHD 553

Query: 468 EFVSRGLCVDVSVYRALIRRFCKKEKVDYAQR-LFNLMQGNGILGDSVIYTSL 519
           E + +G   D   Y  LI    K+ +   A+R LF L+    +  D V Y +L
Sbjct: 554 EMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSD-VTYDTL 605



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 120/412 (29%), Positives = 207/412 (50%), Gaps = 17/412 (4%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           ++  ++ ++M      P       LLN   K+        ++ +MV+ GV  ++  Y  L
Sbjct: 301 KEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTAL 360

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           I++ CK+ ++++  +   +M  + +R +  TY TLI  + ++G+  EA  + + M   G 
Sbjct: 361 INSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGF 420

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
           SP +VTYN+ IHG C   RM EA  + +++  KG  P+ V+Y+T+I G+CR  +L+ A +
Sbjct: 421 SPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQ 480

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           +++ M  KGV P  VTY+S+++ LC+  R+ +A  L  EM +  + PD  T  TLINAYC
Sbjct: 481 MKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYC 540

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
             GD   A+ + + M+  G + D  TY  LI+G  K      AK LLF ++     PS  
Sbjct: 541 VEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDV 600

Query: 445 SYSWLVD---------------GYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFC 489
           +Y  L++               G+C K       ++ +  V R      +VY  +I   C
Sbjct: 601 TYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHC 660

Query: 490 KKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
           +   +  A  L+  M  +G +  +V   +L  A ++ G  +  S+++ D  R
Sbjct: 661 RGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIGDTLR 712



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 130/512 (25%), Positives = 235/512 (45%), Gaps = 39/512 (7%)

Query: 38  LTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSA 97
           L +   +  L++ Y  C +  +  AF      +    + +L S+  +I+ L +    K A
Sbjct: 246 LPNVVTYNTLIDAY--CKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEA 303

Query: 98  QNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHV------------LSWLVIFYANL-- 143
             +LE++  + F       N L+  +   +GN H             +S  V+ Y  L  
Sbjct: 304 WEILEEMGYKGFTPDEVTYNTLLNGYCK-EGNFHQALVIHAEMVRNGVSPSVVTYTALIN 362

Query: 144 -----KMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVA 198
                +     ++ FDQMR+  L P+    T L++  ++  L +  +++  +M + G   
Sbjct: 363 SMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSP 422

Query: 199 NIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQ 258
           ++  YN  IH  C    +++   ++ EM  K +  D+ +Y+T+I+ +C+KG    A  ++
Sbjct: 423 SVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMK 482

Query: 259 DRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRA 316
             M  +G+SPD VTY+SLI G C   R+ EA  L +++   G  P+  TYTTLI+ YC  
Sbjct: 483 QEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVE 542

Query: 317 NDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTC 376
            DL +AL L + M  KG  P  VTY+ ++  L K+ R R+A RLL ++  ++  P +VT 
Sbjct: 543 GDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTY 602

Query: 377 NTLIN---------------AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKA 421
           +TLI                 +C  G    A +V   M+E      +  Y  +IHG C+ 
Sbjct: 603 DTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRG 662

Query: 422 KEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVY 481
             +  A  L   M+ +GF P   +   L+     +   E + +++ + +      +  + 
Sbjct: 663 GNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIGDTLRSCRLNEAELA 722

Query: 482 RALIRRFCKKEKVDYAQRLFNLMQGNGILGDS 513
           + L+    K+  ++    +   M  +G+L +S
Sbjct: 723 KVLVEINHKEGNMEAVLNVLTDMAKDGLLPNS 754



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 88/346 (25%), Positives = 163/346 (47%), Gaps = 6/346 (1%)

Query: 238 YNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCRE-GRMR-EARRLFRD 295
           ++ ++  Y    M  +A+   +  +  G  P +++YNS++    R  G ++  A  ++R+
Sbjct: 145 FDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYRE 204

Query: 296 I--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGR 353
           +     +PN  TY  LI G+C   +L++ L     M   G  P VVTYN+++   CK GR
Sbjct: 205 MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 264

Query: 354 IRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKA 413
           I +A  LL  M+ K + P+ ++ N +IN  C+ G    A ++   M   G   D+ TY  
Sbjct: 265 IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNT 324

Query: 414 LIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
           L++G+CK      A  +   M+  G SPS  +Y+ L++  C   N    ++  D+   RG
Sbjct: 325 LLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRG 384

Query: 474 LCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACS 533
           L  +   Y  LI  F ++  ++ A R+ N M  +G     V Y +  + +      +   
Sbjct: 385 LRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEAL 444

Query: 534 DILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFW--SHVVDRGL 577
            ++ +M  + L   +  Y +  + + +  E+   F     +V++G+
Sbjct: 445 GVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGV 490


>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  248 bits (633), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 152/554 (27%), Positives = 274/554 (49%), Gaps = 19/554 (3%)

Query: 33  NIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTM---IHILT 89
            + SSLT + I + LLNL+     P +   F         ++ H L    T+   I I+ 
Sbjct: 59  QVESSLTPSLISQTLLNLHES---PQVVLDFLN-------HFHHKLSDARTLCLAIVIVA 108

Query: 90  KNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDG--NSHVLSWLVIFYANLKMTQ 147
           +    K A ++L +       ++   +   +    D  G  +S V  +L+    ++    
Sbjct: 109 RLPSPKPALHLLRQALGGGTTNSIREIFEFLAASRDRLGFKSSIVFDYLIKSCCDMNRAD 168

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           +  + F  M+   ++P +  C  LL+   K   T+  W +Y +M +L + ++++ +N++I
Sbjct: 169 EAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMI 228

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           +  CK   + K +  +  ME   V+ ++ TYNT++  YC  G    A A+   M+R+ I 
Sbjct: 229 NVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIE 288

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
           PD  TY SLI G C++GR+ EA ++F ++  KG  P+ V Y TLIDG+C   +L+ A   
Sbjct: 289 PDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAY 348

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
           ++ M  KG+ P + TYNS++  L  E R  +A  ++ E+ EK I+PD +T N LIN YC+
Sbjct: 349 KDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCR 408

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
             +   A  + + ML +G+   + TY +L+H   K   M  A +L   +   G  P    
Sbjct: 409 CANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIM 468

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           ++ L+DG+C+ +N +   +LL +     +  D   +  +++  C++ KV+ A+ LF+ M+
Sbjct: 469 FNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMK 528

Query: 506 GNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNE-- 563
             GI  D + + +L   Y R G+ K    + ++M       T+  Y +      K+ E  
Sbjct: 529 RRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGD 588

Query: 564 ILDLFWSHVVDRGL 577
           + +     +V +G+
Sbjct: 589 LAEELLKEMVSKGM 602



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 104/313 (33%), Positives = 168/313 (53%), Gaps = 2/313 (0%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           ++  ++F++M    L P       L++        DM      +M++ G+   +  YN L
Sbjct: 308 EEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSL 367

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           IHA       D+ E ++ E++ K +  D  TYN LI  YC+     +A  + D M   GI
Sbjct: 368 IHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGI 427

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
            P   TY SL+H   ++ RM+EA  LF+ I  +G  P+ + +  LIDG+C  ++++ A  
Sbjct: 428 KPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFE 487

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           L + M    V P  VT+N+I++  C+EG++ +A  L +EM  + I PD+++ NTLI+ Y 
Sbjct: 488 LLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYS 547

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           + GD   A +V+N ML+ G      TY AL+ G CK +E D+A+ELL  M+  G +P   
Sbjct: 548 RRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDT 607

Query: 445 SYSWLVDGYCNKN 457
           +Y  L++G    N
Sbjct: 608 TYFTLIEGIAKVN 620



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/282 (23%), Positives = 124/282 (43%), Gaps = 54/282 (19%)

Query: 77  SLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWL 136
           ++ ++ ++IH L   +    A+ M+++I  +                  PD  ++  + L
Sbjct: 360 TMSTYNSLIHALFMEQRTDEAECMIKEIQEKGI---------------SPDAITY--NIL 402

Query: 137 VIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGV 196
           +  Y      +    + D+M    + P     T LL+ L+K         ++KK+   GV
Sbjct: 403 INGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGV 462

Query: 197 VANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALA 256
           + +  ++N LI   C +S+V    +LL +M+   V  D  T+NT++  +C++G   EA  
Sbjct: 463 LPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARE 522

Query: 257 VQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI-------------------- 296
           + D M+R GI PD +++N+LI G+ R G +++A R+  ++                    
Sbjct: 523 LFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLC 582

Query: 297 -----------------KGATPNHVTYTTLIDGYCRANDLEE 321
                            KG TP+  TY TLI+G  + N  +E
Sbjct: 583 KNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDE 624


>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
          Length = 1167

 Score =  248 bits (633), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 151/490 (30%), Positives = 248/490 (50%), Gaps = 6/490 (1%)

Query: 94  FKSAQNMLEKIALRDFLSTPSVLNALVK-IHDDPDGNSHVLSWLVIFYANLKMTQDGLQV 152
           F  A  +L K+ +R + S P VL ++ + + D    +  VL  LV  Y      QD  +V
Sbjct: 11  FNLANGLLIKM-IRAYPSPPVVLASIHRALSDSGHRSPAVLDVLVDTYKKSGRVQDAAEV 69

Query: 153 FDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCK 212
              MR   L P +  C  LL  L +     ++WKV + MV  G+  +++ Y+ LI A CK
Sbjct: 70  VLMMRDRGLAPSIRCCNALLKDLLRADAMALLWKVREFMVGAGISPDVYTYSTLIEAYCK 129

Query: 213 SSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVT 272
             + D  +K+L EM  +    +  TYN LIA  C+ G   EA   +  ME  G+ PD  T
Sbjct: 130 VREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFT 189

Query: 273 YNSLIHGFCREGRMREARRLFRDIKGAT--PNHVTYTTLIDGYCRANDLEEALRLREVMA 330
           Y +LI+G C+  R  EA+ L  ++  A   PN V Y  LIDG+ R  + +EA ++ + M 
Sbjct: 190 YGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMV 249

Query: 331 AKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTA 390
           A GV P  +TY++++R LCK G++  A+ LL +M      PD +T N +I  + +  +  
Sbjct: 250 AAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKK 309

Query: 391 SAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLV 450
            A ++ + M  AG+  + +TY  +IHG C++ E + A +LL  M   G  P+   Y+ L+
Sbjct: 310 DAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLI 369

Query: 451 DGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGIL 510
            GYC + N     ++ D+     +  D+  Y +LI    K  +V+ + + F  MQ  G+L
Sbjct: 370 SGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLL 429

Query: 511 GDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI--LDLF 568
            +   Y+ L + Y + G+ ++   ++  M    L     IY     SY K ++I  +   
Sbjct: 430 PNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSST 489

Query: 569 WSHVVDRGLM 578
           +  ++D+G+M
Sbjct: 490 FKSMLDQGVM 499



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 125/440 (28%), Positives = 200/440 (45%), Gaps = 39/440 (8%)

Query: 126 PDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVW 185
           PDG ++    L+      + + +   + D+M    L P++     L++   ++   D  +
Sbjct: 185 PDGFTY--GALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAF 242

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
           K+ K+MV  GV  N   Y+ L+   CK   +D+   LL +M     R D  TYN +I  +
Sbjct: 243 KMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGH 302

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNH 303
            +     +A  +   ME  GISP++ TY+ +IHG C+ G   +A  L  ++  KG  PN 
Sbjct: 303 FRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNA 362

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
             Y  LI GYCR  ++  A  + + M    V P +  YNS++  L K GR+ ++ +   +
Sbjct: 363 FVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQ 422

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGL------------------- 404
           M E+ + P+  T + LI+ Y K GD  SA ++  RML+ GL                   
Sbjct: 423 MQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDD 482

Query: 405 ----------------MLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
                           MLD   Y  LIH    +  M+ A  +L  +   G  P    YS 
Sbjct: 483 IEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSS 542

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG 508
           L+ G C   + E    +LDE   +G+  ++  Y ALI   CK   + YA+ +FN +   G
Sbjct: 543 LISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKG 602

Query: 509 ILGDSVIYTSLAYAYWRAGE 528
           ++ + V YTSL     + G+
Sbjct: 603 LVPNCVTYTSLIDGSCKVGD 622



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 111/411 (27%), Positives = 201/411 (48%), Gaps = 2/411 (0%)

Query: 156 MRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSD 215
           M  + L+P       L+N L K R ++    +  +M    +  N+ +Y  LI    +  +
Sbjct: 178 MEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGN 237

Query: 216 VDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNS 275
            D+  K++ EM    V+ +  TY+ L+   CK G    A  +  +M R+   PD +TYN 
Sbjct: 238 ADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNL 297

Query: 276 LIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKG 333
           +I G  R    ++A RL  +++  G +PN  TY+ +I G C++ + E+A  L E M  KG
Sbjct: 298 IIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKG 357

Query: 334 VYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAM 393
           + P    Y  ++   C+EG +  A  + ++M +  + PD    N+LI    K+G    + 
Sbjct: 358 LKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEEST 417

Query: 394 KVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGY 453
           K   +M E GL+ ++FTY  LIHG+ K  +++ A++L+  MLD G  P+   Y  L++ Y
Sbjct: 418 KYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESY 477

Query: 454 CNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDS 513
              ++ E +       + +G+ +D  +Y  LI        ++ A R+ + ++ NG + D 
Sbjct: 478 FKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDV 537

Query: 514 VIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
            +Y+SL     +  + +    ILD+M ++ +   +  Y +      K  +I
Sbjct: 538 HVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDI 588



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 106/364 (29%), Positives = 181/364 (49%), Gaps = 10/364 (2%)

Query: 185 WKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIAL 244
           +++  +M   G+  N++ Y+++IH  C+S + +K   LL EM  K ++ + F Y  LI+ 
Sbjct: 312 FRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISG 371

Query: 245 YCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPN 302
           YC++G    A  + D+M +  + PD+  YNSLI G  + GR+ E+ + F  +  +G  PN
Sbjct: 372 YCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPN 431

Query: 303 HVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLN 362
             TY+ LI GY +  DLE A +L + M   G+ P  V Y  +L    K   I   +    
Sbjct: 432 EFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFK 491

Query: 363 EMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAK 422
            M ++ +  DN     LI+     G+  +A +V + + + G + D   Y +LI G CK  
Sbjct: 492 SMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTA 551

Query: 423 EMDIAKELLFGMLDA----GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDV 478
           +    +E  FG+LD     G  P+   Y+ L+DG C   +      + +  +++GL  + 
Sbjct: 552 D----REKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNC 607

Query: 479 SVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDD 538
             Y +LI   CK   +  A  L+N M   GI  D+ +Y+ L      AG+ +    ++++
Sbjct: 608 VTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEE 667

Query: 539 MYRR 542
           M+ R
Sbjct: 668 MFLR 671



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 129/482 (26%), Positives = 222/482 (46%), Gaps = 22/482 (4%)

Query: 62  AFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVK 121
           AF   +E        ++ ++  MIH L ++   + A ++LE++  +              
Sbjct: 311 AFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGL------------ 358

Query: 122 IHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLT 181
                  N+ V + L+  Y          ++FD+M   N++P L+    L+  L+K    
Sbjct: 359 -----KPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRV 413

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
           +   K + +M + G++ N   Y+ LIH   K+ D++  E+L+  M    ++ +   Y  L
Sbjct: 414 EESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDL 473

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GA 299
           +  Y K     +  +    M  +G+  D   Y  LIH     G M  A R+  +I+  G+
Sbjct: 474 LESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGS 533

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
            P+   Y++LI G C+  D E+A  + + M+ KGV P +V YN+++  LCK G I  A  
Sbjct: 534 VPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARN 593

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
           + N +  K + P+ VT  +LI+  CK+GD ++A  + N ML  G+  D F Y  L  G  
Sbjct: 594 VFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCS 653

Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
            A +++ A  L+  M   G + S  S++ LVDG+C +   +  LKLL   + RGL  +  
Sbjct: 654 SAGDLEQAMFLIEEMFLRGHA-SISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNAL 712

Query: 480 VYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
               +I    +  K+     +F  +Q       +  ++SL       G  K   D++DDM
Sbjct: 713 TIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQG--KIPLDVVDDM 770

Query: 540 YR 541
            R
Sbjct: 771 IR 772



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 58/236 (24%), Positives = 117/236 (49%), Gaps = 21/236 (8%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           VF+ +    L+P+    T L++   K       + +Y +M+  G+  +  +Y+VL   C 
Sbjct: 594 VFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCS 653

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
            + D+++   L+ EM F    A + ++N L+  +CK+G   E L +   +   G+ P+ +
Sbjct: 654 SAGDLEQAMFLIEEM-FLRGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNAL 712

Query: 272 TYNSLIHGFCREGRMREARRLFRDIKGATPNHVT--YTTL------------------ID 311
           T  ++I G    G++ E   +F +++  T       +++L                  I 
Sbjct: 713 TIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIR 772

Query: 312 GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEK 367
            +C+  +L++AL LR+V+ AK    G  +Y +I+  LC++G++ +A  LL EM+++
Sbjct: 773 DHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKR 828


>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 1032

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 160/495 (32%), Positives = 248/495 (50%), Gaps = 12/495 (2%)

Query: 63  FFKWAES--AVPNYKHSLQSHWTMIHI-LTKNKHFKSAQNMLEKIALRDFLSTPSVLNAL 119
           FF W+ S  + P Y HS    ++++ I L  +     A NMLEK+ L+       +L++L
Sbjct: 106 FFYWSSSKMSTPQYLHS----YSILAIRLCNSGLIHQADNMLEKL-LQTRKPPLEILDSL 160

Query: 120 VKIHDDPDG-NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKD 178
           V+ + +  G N  V    +  +  L    +   VF         P L  C  L+  L K 
Sbjct: 161 VRCYREFGGSNLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKA 220

Query: 179 RLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTY 238
            +  + WKVY  MV+  +V +++ Y  +I A CK  DV K + +L EME K+ + +LFTY
Sbjct: 221 NMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEME-KECKPNLFTY 279

Query: 239 NTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI-- 296
           N  I   C+ G   EAL V+  M  +G+ PD  TY  L+ GFC++ R +EA+ +F  +  
Sbjct: 280 NAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPS 339

Query: 297 KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRD 356
            G  PN  TYT LIDG+ +  ++EEALR+++ M  +G+   VVTYN+++  + K G +  
Sbjct: 340 SGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAK 399

Query: 357 ANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIH 416
           A  L NEM    + PD  T N LI+ Y K  D A A ++   M    L    FTY  LI 
Sbjct: 400 AMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLIS 459

Query: 417 GFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCV 476
           G C + ++  A E+L  M+  G  P+   Y  L+  Y  ++  E  ++LL   ++ G+  
Sbjct: 460 GLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLP 519

Query: 477 DVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDIL 536
           D+  Y  LI   C+ +KV+ A+ L   M   GI  ++  Y +    Y ++GE +      
Sbjct: 520 DLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYF 579

Query: 537 DDMYRRRLMITLKIY 551
            DM    ++    IY
Sbjct: 580 KDMLSSGIVPNNVIY 594



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 127/458 (27%), Positives = 220/458 (48%), Gaps = 40/458 (8%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           Q   +V DQM  + + P++     L+ +  ++   +M  ++ K M+  GV+ ++  YN L
Sbjct: 468 QKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCL 527

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY--------------------- 245
           I   C++  V++ + LL +M  K ++ +  TY   I LY                     
Sbjct: 528 IIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGI 587

Query: 246 --------------CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARR 291
                         C  G   EAL+    M  +G+ PDI  Y+++IH   + G+ +EA  
Sbjct: 588 VPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMG 647

Query: 292 LFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLC 349
           +F      G  P+   Y +LI G+C+  D+E+A +L + M   G+ P +V YN+++  LC
Sbjct: 648 VFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLC 707

Query: 350 KEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQF 409
           K G +  A  L +E+ EK + PD VT +T+I+ YCK G+   A K+ + M+  G+  D +
Sbjct: 708 KLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGY 767

Query: 410 TYKALIHGFCKAKEMDIAKEL-LFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
            Y  LI G C  KE ++ K L LF         S  +++ L+D +C         +L D+
Sbjct: 768 IYCILIDG-C-GKEGNLEKALSLFHEAQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDD 825

Query: 469 FVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
            V + L  ++  Y  LI  + K E ++ A++LF  M+   I+ +++ YTSL  +Y + G 
Sbjct: 826 MVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGN 885

Query: 529 PKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
                 +  DM  R +      Y   +++Y K+ + L+
Sbjct: 886 RFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLE 923



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 122/412 (29%), Positives = 202/412 (49%), Gaps = 3/412 (0%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           ++  +M+   L P     +VL++ L          +V  +M++ GV  N+ +Y  LI A 
Sbjct: 437 ELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAY 496

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
            + S  +   +LL  M    V  DLF YN LI   C+     EA  +   M  +GI P+ 
Sbjct: 497 VQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNA 556

Query: 271 VTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
            TY + I+ + + G ++ A R F+D+   G  PN+V YT LI G+C   +  EAL   + 
Sbjct: 557 HTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKC 616

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M  KG+ P +  Y++I+  L K G+ ++A  +  +  +  + PD    N+LI+ +CK GD
Sbjct: 617 MLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGD 676

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
              A ++ + ML  G+  +   Y  LI+G CK  E+  A+EL   + +    P   +YS 
Sbjct: 677 IEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYST 736

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG 508
           ++DGYC   N     KL DE +S+G+  D  +Y  LI    K+  ++ A  LF+  Q   
Sbjct: 737 IIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKS 796

Query: 509 ILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAK 560
           + G    + SL  ++ + G+     ++ DDM  ++L   +  Y     +Y K
Sbjct: 797 V-GSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGK 847



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 121/456 (26%), Positives = 215/456 (47%), Gaps = 6/456 (1%)

Query: 126 PDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVW 185
           PDG+++ L  LV  +   K +++   +F+ M    L P+    T L++   K+   +   
Sbjct: 309 PDGHTYTL--LVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEAL 366

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
           ++  +M+  G+  N+  YN +I    K+ ++ K   L  EM    +  D +TYN LI  Y
Sbjct: 367 RIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGY 426

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNH 303
            K     +A  +   M+   ++P   TY+ LI G C    +++A  +   +   G  PN 
Sbjct: 427 LKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNV 486

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
             Y TLI  Y + +  E A+ L ++M A GV P +  YN ++  LC+  ++ +A  LL +
Sbjct: 487 FMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVD 546

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
           M EK I P+  T    IN Y K G+   A +    ML +G++ +   Y  LI G C    
Sbjct: 547 MGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGN 606

Query: 424 MDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRA 483
              A      ML+ G  P   +YS ++         +  + +  +F+  G+  DV +Y +
Sbjct: 607 TVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNS 666

Query: 484 LIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRR 543
           LI  FCK+  ++ A +L++ M  NGI  + V+Y +L     + GE     ++ D++  + 
Sbjct: 667 LISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKD 726

Query: 544 LMITLKIYRSFSASYAKDNEILDLF--WSHVVDRGL 577
           L+  +  Y +    Y K   + + F  +  ++ +G+
Sbjct: 727 LVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGI 762



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 117/423 (27%), Positives = 212/423 (50%), Gaps = 3/423 (0%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N+H     +  Y+     Q   + F  M    ++P+    T+L+        T      +
Sbjct: 555 NAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTF 614

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
           K M++ G++ +I  Y+ +IH+  K+    +   +  +     V  D+F YN+LI+ +CK+
Sbjct: 615 KCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKE 674

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTY 306
           G   +A  + D M   GI+P+IV YN+LI+G C+ G + +AR LF +I  K   P+ VTY
Sbjct: 675 GDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTY 734

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
           +T+IDGYC++ +L EA +L + M +KG+ P    Y  ++    KEG +  A  L +E  +
Sbjct: 735 STIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQ 794

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
           K +   +   N+LI+++CK G    A ++ + M++  L  +  TY  LI  + KA+ M+ 
Sbjct: 795 KSVGSLSAF-NSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEE 853

Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
           A++L   M      P+  +Y+ L+  Y    N   ++ L  +  +RG+  D   Y  +  
Sbjct: 854 AEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMAS 913

Query: 487 RFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMI 546
            +CK+ K   A +L N     GI  +  ++ +L +   +  +     ++L +M +  L +
Sbjct: 914 AYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSL 973

Query: 547 TLK 549
           + K
Sbjct: 974 SSK 976



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 118/415 (28%), Positives = 210/415 (50%), Gaps = 3/415 (0%)

Query: 129  NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
            N+ + + L+  + ++  T + L  F  M    L+P + A + +++SL+K+  T     V+
Sbjct: 590  NNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVF 649

Query: 189  KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
             K ++ GVV ++ LYN LI   CK  D++K  +L  EM    +  ++  YNTLI   CK 
Sbjct: 650  LKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKL 709

Query: 249  GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTY 306
            G   +A  + D +E + + PD+VTY+++I G+C+ G + EA +LF ++  KG +P+   Y
Sbjct: 710  GEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIY 769

Query: 307  TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
              LIDG  +  +LE+AL L      K V   +  +NS++   CK G++ +A  L ++M +
Sbjct: 770  CILIDGCGKEGNLEKALSLFHEAQQKSV-GSLSAFNSLIDSFCKHGKVIEARELFDDMVD 828

Query: 367  KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
            KK+ P+ VT   LI+AY K      A ++   M    ++ +  TY +L+  + +      
Sbjct: 829  KKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFK 888

Query: 427  AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
               L   M   G +    +Y  +   YC +      LKLL++ +  G+ ++  V+ ALI 
Sbjct: 889  MISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIF 948

Query: 487  RFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
              CK++++     L + M    +   S    +L   ++++G     S +L  M R
Sbjct: 949  HLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQR 1003


>gi|410109901|gb|AFV61030.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           microcephala]
          Length = 431

 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 131/428 (30%), Positives = 234/428 (54%), Gaps = 4/428 (0%)

Query: 62  AFFKWAES-AVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS-VLNAL 119
           +FF W  S A  N++H+L S+ TMIH L  ++    A+++++ +  R    + S V  A+
Sbjct: 2   SFFTWLSSPANSNFRHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAI 61

Query: 120 VKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDR 179
           ++       + +V S L+  Y      +D ++ +   R H     +  C  +L  L K +
Sbjct: 62  LETRGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPIDTCRKVLEHLMKLK 121

Query: 180 LTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYN 239
              +VW  Y+++++ G  A+++ +N+L+H  CK  D+   + +   +    +R  + +YN
Sbjct: 122 YFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRLAQSVFDAITKWGLRPSVVSYN 181

Query: 240 TLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IK 297
           TL+  Y + G   E   ++  M   G+ PD+ TY+ LI+G C+E +M +A  LF +  +K
Sbjct: 182 TLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVK 241

Query: 298 GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDA 357
           G  PN VT+TTLIDG+C+   ++ A+ + + M ++ + P ++TYN+++  LCK+G ++ A
Sbjct: 242 GLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQA 301

Query: 358 NRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHG 417
           + L++EM+ K + PD +T  TLI+  CK GD  SA + + RM++  + LD+  Y ALI G
Sbjct: 302 HHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISG 361

Query: 418 FCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVD 477
            C+      A+++L  ML  G  P   +Y+ +++ +C K +     KLL E    G    
Sbjct: 362 LCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPS 421

Query: 478 VSVYRALI 485
           V  Y  L+
Sbjct: 422 VVTYNVLM 429



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 93/279 (33%), Positives = 149/279 (53%), Gaps = 2/279 (0%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           G    +  +N L+H FC++G +R A+ +F  I   G  P+ V+Y TL++GY R  DL+E 
Sbjct: 137 GYPASLYFFNILMHRFCKDGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEG 196

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            RL+  M A GV P V TY+ ++  LCKE ++ DAN L +EM  K + P+ VT  TLI+ 
Sbjct: 197 FRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDG 256

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +CK G    AM++  +ML   L  D  TY  LI+G CK  ++  A  L+  M   G  P 
Sbjct: 257 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPD 316

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ L+DG C + + ++  +     +   + +D   Y ALI   C++ +   A+++  
Sbjct: 317 KITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLR 376

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
            M   G+  D+  YT +   + + G+    S +L +M R
Sbjct: 377 EMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQR 415



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 92/329 (27%), Positives = 153/329 (46%), Gaps = 40/329 (12%)

Query: 230 DVRADLFTYNTLIALYCKKGMHYEALA-VQDRMEREGISP-----------------DIV 271
           + R  L +Y T+I   C   M  EA + +Q  + R+G                    DI 
Sbjct: 14  NFRHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAILETRGTQRSDIY 73

Query: 272 TYNSLIHGFCREGRMREA---RRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
            ++ LI  +   G +R+A    RL R+ K   P        ID  CR   LE  ++L+  
Sbjct: 74  VFSGLITAYLESGFLRDAIECYRLTREHKFWVP--------IDT-CR-KVLEHLMKLKYF 123

Query: 329 MAAKGVYPGVVT---------YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTL 379
               G Y  ++          +N ++ + CK+G IR A  + + + +  + P  V+ NTL
Sbjct: 124 KLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRLAQSVFDAITKWGLRPSVVSYNTL 183

Query: 380 INAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGF 439
           +N Y ++GD     ++K+ ML +G+  D +TY  LI+G CK  +MD A EL   ML  G 
Sbjct: 184 MNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGL 243

Query: 440 SPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQR 499
            P+  +++ L+DG+C     +  +++  + +S+ L  D+  Y  LI   CKK  +  A  
Sbjct: 244 VPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHH 303

Query: 500 LFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
           L + M   G+  D + YT+L     + G+
Sbjct: 304 LIDEMSVKGLKPDKITYTTLIDGCCKEGD 332



 Score = 85.1 bits (209), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 64/288 (22%), Positives = 121/288 (42%), Gaps = 20/288 (6%)

Query: 272 TYNSLIHGFCREGRMREARRLFR-------------------DIKGATPNHV-TYTTLID 311
           +Y ++IH  C    + EA+ L +                   + +G   + +  ++ LI 
Sbjct: 21  SYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAILETRGTQRSDIYVFSGLIT 80

Query: 312 GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAP 371
            Y  +  L +A+    +      +  + T   +L  L K    +       E+ E     
Sbjct: 81  AYLESGFLRDAIECYRLTREHKFWVPIDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPA 140

Query: 372 DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
                N L++ +CK GD   A  V + + + GL     +Y  L++G+ +  ++D    L 
Sbjct: 141 SLYFFNILMHRFCKDGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLK 200

Query: 432 FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
             ML +G  P   +YS L++G C ++  +   +L DE + +GL  +   +  LI   CK 
Sbjct: 201 SAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKN 260

Query: 492 EKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
            +VD A  ++  M    +  D + Y +L Y   + G+ K    ++D+M
Sbjct: 261 GRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEM 308



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 64/129 (49%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
            + D+M V  L P     T L++   K+   D  ++  K+M+Q  +  +   Y  LI   
Sbjct: 303 HLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGL 362

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           C+       EK+L EM    ++ D  TY  +I  +CKKG  ++   +   M+R+G  P +
Sbjct: 363 CQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSV 422

Query: 271 VTYNSLIHG 279
           VTYN L++G
Sbjct: 423 VTYNVLMNG 431


>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein
           [Arabidopsis lyrata subsp. lyrata]
 gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 1164

 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 143/468 (30%), Positives = 239/468 (51%), Gaps = 10/468 (2%)

Query: 63  FFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFL----STPSVLNA 118
           FF WA S       +L+S   +IH+   +K  K AQ+++     R  L    S     + 
Sbjct: 530 FFDWARS---RRDSNLESLCIVIHLAVASKDLKVAQSLISSFWERPKLNVTESFVQFFDL 586

Query: 119 LVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKD 178
           LV  + D   +  V            M  +  +VF++M  + L+  + +C V L  L+KD
Sbjct: 587 LVYTYKDWGSDPRVFDVFFQVLVEFGMLPEARKVFEKMLNYGLVLSVDSCNVYLARLSKD 646

Query: 179 -RLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFT 237
              T     V+++  ++GV  N+  YN++IH  C+   +++   LL  ME K    D+ +
Sbjct: 647 CNKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVIS 706

Query: 238 YNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI- 296
           Y+T+I  YC+ G   +   + ++M+++G+ P+  TY S+I   CR  ++ EA   F ++ 
Sbjct: 707 YSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMI 766

Query: 297 -KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIR 355
            +G  P+ + YTTL+DG+C+  D+  A +    M ++ + P V+TY +I+   C+ G + 
Sbjct: 767 GQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMV 826

Query: 356 DANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALI 415
           +A +L +EM  + + PD +T   L+N YCK G    A +V N M++AG   +  TY  LI
Sbjct: 827 EAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLI 886

Query: 416 HGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLC 475
            G CK  ++D A ELL  M   G  P+  +Y+ +V+G C   N E  +KL+ EF + GL 
Sbjct: 887 DGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLN 946

Query: 476 VDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAY 523
            D   Y  L+  +CK  ++D AQ +   M G G+    V +  L   +
Sbjct: 947 ADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGF 994



 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 120/413 (29%), Positives = 216/413 (52%), Gaps = 2/413 (0%)

Query: 156  MRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSD 215
            M +    P + + + ++N   +    D VWK+ +KM Q G+  N + Y  +I   C+   
Sbjct: 695  MELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICK 754

Query: 216  VDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNS 275
            + + E+   EM  + +  D   Y TL+  +CK+G    A      M    I+PD++TY +
Sbjct: 755  LAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTA 814

Query: 276  LIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKG 333
            +I GFC+ G M EA +LF ++  +G  P+ +T+T L++GYC+A  +++A R+   M   G
Sbjct: 815  IISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAG 874

Query: 334  VYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAM 393
              P VVTY +++  LCKEG +  AN LL+EM +  + P+  T N+++N  CK G+   A+
Sbjct: 875  CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 934

Query: 394  KVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGY 453
            K+      AGL  D  TY  L+  +CK+ EMD A+E+L  ML  G  P+  +++ L++G+
Sbjct: 935  KLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGF 994

Query: 454  CNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDS 513
            C     E   KLL+  +++G+  + + +  L++++C +  +  A  ++  M   G+  D 
Sbjct: 995  CLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDG 1054

Query: 514  VIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
              Y +L   +  A   K    +  +M  +   +++  Y      + K  + ++
Sbjct: 1055 KTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVE 1107



 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 125/412 (30%), Positives = 210/412 (50%), Gaps = 2/412 (0%)

Query: 151  QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
            ++ ++M+   L P+ +    ++  L +        + + +M+  G++ +  +Y  L+   
Sbjct: 725  KLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGF 784

Query: 211  CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
            CK  D+    K   EM  +D+  D+ TY  +I+ +C+ G   EA  +   M   G+ PDI
Sbjct: 785  CKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDI 844

Query: 271  VTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
            +T+  L++G+C+ G +++A R+   +   G +PN VTYTTLIDG C+  DL+ A  L   
Sbjct: 845  ITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHE 904

Query: 329  MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
            M   G+ P + TYNSI+  LCK G I +A +L+ E     +  D VT  TL++AYCK G+
Sbjct: 905  MWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGE 964

Query: 389  TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
               A ++   ML  GL     T+  L++GFC    ++  ++LL  ML  G +P+  +++ 
Sbjct: 965  MDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNC 1024

Query: 449  LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG 508
            LV  YC +NN +A   +  +  SRG+  D   Y  L++  C    +  A  LF  M+G G
Sbjct: 1025 LVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKG 1084

Query: 509  ILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAK 560
                   Y+ L   +++  +     +I D M R  L    +I+  FS +  K
Sbjct: 1085 FSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDGLAADKEIFDFFSDTKYK 1136



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 54/227 (23%), Positives = 113/227 (49%), Gaps = 1/227 (0%)

Query: 341 YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK-IGDTASAMKVKNRM 399
           ++   + L + G + +A ++  +M    +     +CN  +    K    TA+A+ V    
Sbjct: 601 FDVFFQVLVEFGMLPEARKVFEKMLNYGLVLSVDSCNVYLARLSKDCNKTATAIIVFREF 660

Query: 400 LEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNE 459
            E G+  +  +Y  +IH  C+   ++ A  LL  M   G++P   SYS +++GYC     
Sbjct: 661 PEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGEL 720

Query: 460 EALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
           + + KL+++   +GL  +   Y ++I   C+  K+  A+  F+ M G GIL D+++YT+L
Sbjct: 721 DKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTL 780

Query: 520 AYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
              + + G+ +A S    +M+ R +   +  Y +  + + +  ++++
Sbjct: 781 VDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVE 827



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 60/254 (23%), Positives = 106/254 (41%), Gaps = 1/254 (0%)

Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKE-GRIRDANRLLNEMNEKKIAPDNVTCN 377
           L EA ++ E M   G+   V + N  L +L K+  +   A  +  E  E  +  +  + N
Sbjct: 614 LPEARKVFEKMLNYGLVLSVDSCNVYLARLSKDCNKTATAIIVFREFPEVGVCWNVASYN 673

Query: 378 TLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA 437
            +I+  C++G    A  +   M   G   D  +Y  +I+G+C+  E+D   +L+  M   
Sbjct: 674 IVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQK 733

Query: 438 GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYA 497
           G  P+  +Y  ++   C         +   E + +G+  D  VY  L+  FCK+  +  A
Sbjct: 734 GLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAA 793

Query: 498 QRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSAS 557
            + F  M    I  D + YT++   + + G+      +  +M  R L   +  +      
Sbjct: 794 SKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNG 853

Query: 558 YAKDNEILDLFWSH 571
           Y K   I D F  H
Sbjct: 854 YCKAGHIKDAFRVH 867


>gi|255578729|ref|XP_002530223.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223530270|gb|EEF32170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 517

 Score =  244 bits (624), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 139/466 (29%), Positives = 256/466 (54%), Gaps = 9/466 (1%)

Query: 10  DTKFIKTISAIMLKGHWAKLLNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAES 69
           D  F+    + ++   W KL   ++++ LT   +  +LL +    H+  LS  FF W ++
Sbjct: 31  DLDFVNVAHSHLIHSDWKKL--TSLSTHLTPFRVKHILLKIQKD-HV--LSLEFFNWVQT 85

Query: 70  AVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVL-NALVKIHDDPDG 128
             P+  H+L++H  ++HILTKN+ FKSA+ +L+ + ++ F+  P  L  A++  +   D 
Sbjct: 86  ENPS-SHTLETHSMILHILTKNRKFKSAELILKSVLVKGFIDLPDKLFEAILYSYRMCDS 144

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           +  V   L    A++K  ++    F QM+ +  +P + +C   L+SL      D+    Y
Sbjct: 145 SPRVFDSLFKTLAHMKKFRNATDTFLQMKGYGFLPTVESCNAYLSSLLDLHRVDIALAFY 204

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
           K+M +  +  N++  N+++ A CKS  ++K  ++  EME   +  +  +YNTLI  YC+K
Sbjct: 205 KEMRRCRISPNVYTRNMVMRAFCKSGKLEKAVQVFEEMESVGISPNDTSYNTLIMGYCRK 264

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTY 306
           G+   A+ +++ M  +G+  ++VT+NSLI GFC+EG++ EA ++F ++K     PN +TY
Sbjct: 265 GLLNSAVKLKNSMRAKGVEANVVTFNSLIDGFCKEGKLHEASKVFSEMKVLNVAPNTITY 324

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
            TLI+G+ +  + E   RL E M+  GV   ++TYN+++  LCKEG+ + A  ++ E+++
Sbjct: 325 NTLINGHSQMGNSEMGRRLYEEMSRNGVKADILTYNALILGLCKEGKTKKAAYMVKELDK 384

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
           + + P+  T + LI+  C   ++  A ++   M+  G   ++ T+  L+  FCK ++ + 
Sbjct: 385 ENLVPNASTFSALISGQCIRNNSDRAFQLYKSMVRIGCHPNEQTFNMLVSAFCKNEDFEG 444

Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSR 472
           A  +L  M +  F+P     S +  G C    E   +KL  E  +R
Sbjct: 445 AFLVLMEMFERCFTPGSDVLSEIYHGLCCCGKEHLAMKLSSELKAR 490



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 83/246 (33%), Positives = 137/246 (55%), Gaps = 2/246 (0%)

Query: 254 ALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLID 311
           ALA    M R  ISP++ T N ++  FC+ G++ +A ++F +++  G +PN  +Y TLI 
Sbjct: 200 ALAFYKEMRRCRISPNVYTRNMVMRAFCKSGKLEKAVQVFEEMESVGISPNDTSYNTLIM 259

Query: 312 GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAP 371
           GYCR   L  A++L+  M AKGV   VVT+NS++   CKEG++ +A+++ +EM    +AP
Sbjct: 260 GYCRKGLLNSAVKLKNSMRAKGVEANVVTFNSLIDGFCKEGKLHEASKVFSEMKVLNVAP 319

Query: 372 DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
           + +T NTLIN + ++G++    ++   M   G+  D  TY ALI G CK  +   A  ++
Sbjct: 320 NTITYNTLINGHSQMGNSEMGRRLYEEMSRNGVKADILTYNALILGLCKEGKTKKAAYMV 379

Query: 432 FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
             +      P+  ++S L+ G C +NN +   +L    V  G   +   +  L+  FCK 
Sbjct: 380 KELDKENLVPNASTFSALISGQCIRNNSDRAFQLYKSMVRIGCHPNEQTFNMLVSAFCKN 439

Query: 492 EKVDYA 497
           E  + A
Sbjct: 440 EDFEGA 445



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 68/255 (26%), Positives = 122/255 (47%), Gaps = 4/255 (1%)

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDIKGAT--PNHVTYTTLIDGYCRANDLEEALR 324
           SP +  ++SL        + R A   F  +KG    P   +    +      + ++ AL 
Sbjct: 145 SPRV--FDSLFKTLAHMKKFRNATDTFLQMKGYGFLPTVESCNAYLSSLLDLHRVDIALA 202

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
             + M    + P V T N ++R  CK G++  A ++  EM    I+P++ + NTLI  YC
Sbjct: 203 FYKEMRRCRISPNVYTRNMVMRAFCKSGKLEKAVQVFEEMESVGISPNDTSYNTLIMGYC 262

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           + G   SA+K+KN M   G+  +  T+ +LI GFCK  ++  A ++   M     +P+  
Sbjct: 263 RKGLLNSAVKLKNSMRAKGVEANVVTFNSLIDGFCKEGKLHEASKVFSEMKVLNVAPNTI 322

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
           +Y+ L++G+    N E   +L +E    G+  D+  Y ALI   CK+ K   A  +   +
Sbjct: 323 TYNTLINGHSQMGNSEMGRRLYEEMSRNGVKADILTYNALILGLCKEGKTKKAAYMVKEL 382

Query: 505 QGNGILGDSVIYTSL 519
               ++ ++  +++L
Sbjct: 383 DKENLVPNASTFSAL 397



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 67/285 (23%), Positives = 133/285 (46%), Gaps = 2/285 (0%)

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGA--TPNHVTYTTLIDGYCRAN 317
           +M+  G  P + + N+ +       R+  A   +++++    +PN  T   ++  +C++ 
Sbjct: 171 QMKGYGFLPTVESCNAYLSSLLDLHRVDIALAFYKEMRRCRISPNVYTRNMVMRAFCKSG 230

Query: 318 DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCN 377
            LE+A+++ E M + G+ P   +YN+++   C++G +  A +L N M  K +  + VT N
Sbjct: 231 KLEKAVQVFEEMESVGISPNDTSYNTLIMGYCRKGLLNSAVKLKNSMRAKGVEANVVTFN 290

Query: 378 TLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA 437
           +LI+ +CK G    A KV + M    +  +  TY  LI+G  +    ++ + L   M   
Sbjct: 291 SLIDGFCKEGKLHEASKVFSEMKVLNVAPNTITYNTLINGHSQMGNSEMGRRLYEEMSRN 350

Query: 438 GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYA 497
           G      +Y+ L+ G C +   +    ++ E     L  + S + ALI   C +   D A
Sbjct: 351 GVKADILTYNALILGLCKEGKTKKAAYMVKELDKENLVPNASTFSALISGQCIRNNSDRA 410

Query: 498 QRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRR 542
            +L+  M   G   +   +  L  A+ +  + +    +L +M+ R
Sbjct: 411 FQLYKSMVRIGCHPNEQTFNMLVSAFCKNEDFEGAFLVLMEMFER 455



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 52/217 (23%), Positives = 97/217 (44%)

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M   G  P V + N+ L  L    R+  A     EM   +I+P+  T N ++ A+CK G 
Sbjct: 172 MKGYGFLPTVESCNAYLSSLLDLHRVDIALAFYKEMRRCRISPNVYTRNMVMRAFCKSGK 231

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
              A++V   M   G+  +  +Y  LI G+C+   ++ A +L   M   G   +  +++ 
Sbjct: 232 LEKAVQVFEEMESVGISPNDTSYNTLIMGYCRKGLLNSAVKLKNSMRAKGVEANVVTFNS 291

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG 508
           L+DG+C +       K+  E     +  +   Y  LI    +    +  +RL+  M  NG
Sbjct: 292 LIDGFCKEGKLHEASKVFSEMKVLNVAPNTITYNTLINGHSQMGNSEMGRRLYEEMSRNG 351

Query: 509 ILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
           +  D + Y +L     + G+ K  + ++ ++ +  L+
Sbjct: 352 VKADILTYNALILGLCKEGKTKKAAYMVKELDKENLV 388



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 46/223 (20%), Positives = 104/223 (46%)

Query: 341 YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML 400
           ++S+ + L    + R+A     +M      P   +CN  +++   +     A+     M 
Sbjct: 149 FDSLFKTLAHMKKFRNATDTFLQMKGYGFLPTVESCNAYLSSLLDLHRVDIALAFYKEMR 208

Query: 401 EAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEE 460
              +  + +T   ++  FCK+ +++ A ++   M   G SP+  SY+ L+ GYC K    
Sbjct: 209 RCRISPNVYTRNMVMRAFCKSGKLEKAVQVFEEMESVGISPNDTSYNTLIMGYCRKGLLN 268

Query: 461 ALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLA 520
           + +KL +   ++G+  +V  + +LI  FCK+ K+  A ++F+ M+   +  +++ Y +L 
Sbjct: 269 SAVKLKNSMRAKGVEANVVTFNSLIDGFCKEGKLHEASKVFSEMKVLNVAPNTITYNTLI 328

Query: 521 YAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNE 563
             + + G  +    + ++M R  +   +  Y +      K+ +
Sbjct: 329 NGHSQMGNSEMGRRLYEEMSRNGVKADILTYNALILGLCKEGK 371


>gi|410109947|gb|AFV61053.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           salviifolia]
          Length = 431

 Score =  244 bits (624), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 131/428 (30%), Positives = 233/428 (54%), Gaps = 4/428 (0%)

Query: 62  AFFKWAES-AVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS-VLNAL 119
           +FF W  S A   ++H+L S+ TMIH L  ++ F  A+++L+ +  R    + S V  A+
Sbjct: 2   SFFTWLSSPANSTFRHTLHSYCTMIHFLCTHQMFSEAKSLLQVVVSRKGKGSASAVFAAI 61

Query: 120 VKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDR 179
           ++       + +V S L+  Y      +D ++ +   R H L      C  +L  L K +
Sbjct: 62  LETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEYLMKLK 121

Query: 180 LTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYN 239
              +VW  Y+++++ G  A+++ +N+L+H  CK  D+   + +   +    +R    +YN
Sbjct: 122 YFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSAVSYN 181

Query: 240 TLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IK 297
           TL+  Y + G+  E   ++  M   G+ PD+ TY+ LI+G  +E +M +A  LF +  +K
Sbjct: 182 TLMNGYIRLGVLDEGFRLKSAMLASGVQPDVYTYSVLINGLSKESKMDDADELFDEMLVK 241

Query: 298 GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDA 357
           G  PN VT+TTLIDG+C+   ++ A+ + + M ++ + P ++TYN+++  LCK+G ++ A
Sbjct: 242 GLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQA 301

Query: 358 NRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHG 417
           + L+++M+ K + PD +T  TLI+  CK GD  SA + + RM++  + LD   Y ALI G
Sbjct: 302 HDLIDDMSRKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDDVVYTALISG 361

Query: 418 FCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVD 477
            C+      A+++L  ML  G +P   +Y+ +++ +C K +     KLL E    G    
Sbjct: 362 LCQEGRSVDAEKMLREMLSVGLNPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPS 421

Query: 478 VSVYRALI 485
           V  Y  L+
Sbjct: 422 VVTYNVLM 429



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 91/279 (32%), Positives = 150/279 (53%), Gaps = 2/279 (0%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           G    +  +N L+H FC++G +R A+ +F  I   G  P+ V+Y TL++GY R   L+E 
Sbjct: 137 GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSAVSYNTLMNGYIRLGVLDEG 196

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            RL+  M A GV P V TY+ ++  L KE ++ DA+ L +EM  K + P+ VT  TLI+ 
Sbjct: 197 FRLKSAMLASGVQPDVYTYSVLINGLSKESKMDDADELFDEMLVKGLVPNGVTFTTLIDG 256

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +CK G    AM++  +ML   L+ D  TY  LI+G CK  ++  A +L+  M   G  P 
Sbjct: 257 HCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSRKGLKPD 316

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ L+DG C + + ++  +     +   + +D  VY ALI   C++ +   A+++  
Sbjct: 317 KITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLR 376

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
            M   G+  D+  YT +   + + G+    S +L +M R
Sbjct: 377 EMLSVGLNPDTGTYTMIINEFCKKGDVWKGSKLLKEMQR 415



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 86/324 (26%), Positives = 147/324 (45%), Gaps = 34/324 (10%)

Query: 232 RADLFTYNTLIALYCKKGMHYEALAV-QDRMEREGISP-----------------DIVTY 273
           R  L +Y T+I   C   M  EA ++ Q  + R+G                    DI  +
Sbjct: 16  RHTLHSYCTMIHFLCTHQMFSEAKSLLQVVVSRKGKGSASAVFAAILETKGTQRSDIYVF 75

Query: 274 NSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKG 333
           + LI  +   G +R+A   +R     T  H  +       CR   LE  ++L+      G
Sbjct: 76  SGLITAYLESGFLRDAIECYR----LTREHKLWVPF--DTCRKV-LEYLMKLKYFKLVWG 128

Query: 334 VYPGVVT---------YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
            Y  ++          +N ++ + CK+G IR A  + + + +  + P  V+ NTL+N Y 
Sbjct: 129 FYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSAVSYNTLMNGYI 188

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           ++G      ++K+ ML +G+  D +TY  LI+G  K  +MD A EL   ML  G  P+  
Sbjct: 189 RLGVLDEGFRLKSAMLASGVQPDVYTYSVLINGLSKESKMDDADELFDEMLVKGLVPNGV 248

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
           +++ L+DG+C     +  +++  + +S+ L  D+  Y  LI   CKK  +  A  L + M
Sbjct: 249 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDM 308

Query: 505 QGNGILGDSVIYTSLAYAYWRAGE 528
              G+  D + YT+L     + G+
Sbjct: 309 SRKGLKPDKITYTTLIDGCCKEGD 332



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 69/293 (23%), Positives = 123/293 (41%), Gaps = 20/293 (6%)

Query: 272 TYNSLIHGFCREGRMREARRLFR-------------------DIKGATPNHV-TYTTLID 311
           +Y ++IH  C      EA+ L +                   + KG   + +  ++ LI 
Sbjct: 21  SYCTMIHFLCTHQMFSEAKSLLQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLIT 80

Query: 312 GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAP 371
            Y  +  L +A+    +     ++    T   +L  L K    +       E+ E     
Sbjct: 81  AYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEYLMKLKYFKLVWGFYEEILECGYPA 140

Query: 372 DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
                N L++ +CK GD   A  V + + + GL     +Y  L++G+ +   +D    L 
Sbjct: 141 SLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSAVSYNTLMNGYIRLGVLDEGFRLK 200

Query: 432 FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
             ML +G  P   +YS L++G   ++  +   +L DE + +GL  +   +  LI   CK 
Sbjct: 201 SAMLASGVQPDVYTYSVLINGLSKESKMDDADELFDEMLVKGLVPNGVTFTTLIDGHCKN 260

Query: 492 EKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL 544
            +VD A  ++  M    +L D + Y +L Y   + G+ K   D++DDM R+ L
Sbjct: 261 GRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSRKGL 313



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 66/139 (47%), Gaps = 3/139 (2%)

Query: 141 ANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANI 200
            +LK   D   + D M    L P     T L++   K+   D  ++  K+M+Q  +  + 
Sbjct: 296 GDLKQAHD---LIDDMSRKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDD 352

Query: 201 HLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDR 260
            +Y  LI   C+       EK+L EM    +  D  TY  +I  +CKKG  ++   +   
Sbjct: 353 VVYTALISGLCQEGRSVDAEKMLREMLSVGLNPDTGTYTMIINEFCKKGDVWKGSKLLKE 412

Query: 261 MEREGISPDIVTYNSLIHG 279
           M+R+G  P +VTYN L++G
Sbjct: 413 MQRDGHVPSVVTYNVLMNG 431


>gi|410109937|gb|AFV61048.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           pusilla]
          Length = 431

 Score =  244 bits (624), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 130/428 (30%), Positives = 230/428 (53%), Gaps = 4/428 (0%)

Query: 62  AFFKWAESAV-PNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS-VLNAL 119
           +FF W  S     ++H+L S+ TMIH L  ++ F  A+++++ +  R    + S V  A+
Sbjct: 2   SFFTWLSSPSNSTFRHTLHSYCTMIHFLCTHQMFSEAKSLIQVVVSRKGKGSASAVFAAI 61

Query: 120 VKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDR 179
           ++       + +V S L+  Y      +D ++ +   R H L      C  +L  L K +
Sbjct: 62  LETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLK 121

Query: 180 LTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYN 239
              +VW  Y+++++ G  A+++ +N+L+H  CK  D+   + +   +    +R  + +YN
Sbjct: 122 YFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYN 181

Query: 240 TLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IK 297
           TL+  Y + G   E   ++  M   G+ PD  TY+ LI+G C+E +M +A  LF +  +K
Sbjct: 182 TLMNGYIRLGDLDEGFRLKSAMLASGVQPDXYTYSVLINGLCKESKMDDANELFDEMLVK 241

Query: 298 GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDA 357
           G  PN VT+TTLIDG+C+   ++ A+ + + M ++ + P ++TYN+++  LCK+G ++ A
Sbjct: 242 GLVPNGVTFTTLIDGHCKKGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQA 301

Query: 358 NRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHG 417
           N L++EM  K + PD +T  TLI+  CK GD  +A + + RM++  + LD   Y ALI G
Sbjct: 302 NDLIDEMVMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISG 361

Query: 418 FCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVD 477
            C+      A+++L  ML  G  P   +Y+ +++ +C K +     +LL E    G    
Sbjct: 362 LCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSRLLKEMQRNGHVPS 421

Query: 478 VSVYRALI 485
           V  Y  L+
Sbjct: 422 VVTYNVLM 429



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 93/279 (33%), Positives = 150/279 (53%), Gaps = 2/279 (0%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           G    +  +N L+H FC++G +R A+ +F  I   G  P+ V+Y TL++GY R  DL+E 
Sbjct: 137 GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEG 196

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            RL+  M A GV P   TY+ ++  LCKE ++ DAN L +EM  K + P+ VT  TLI+ 
Sbjct: 197 FRLKSAMLASGVQPDXYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDG 256

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +CK G    AM++  RML   L+ D  TY  LI+G CK  ++  A +L+  M+  G  P 
Sbjct: 257 HCKKGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMVMKGLKPD 316

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ L+DG C + + +   +     +   + +D   Y ALI   C++ +   A+++  
Sbjct: 317 KITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLR 376

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
            M   G+  D+  YT +   + + G+    S +L +M R
Sbjct: 377 EMLSVGLKPDTGTYTMIINEFCKKGDVWKGSRLLKEMQR 415



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 89/324 (27%), Positives = 149/324 (45%), Gaps = 34/324 (10%)

Query: 232 RADLFTYNTLIALYCKKGMHYEALA-VQDRMEREGISP-----------------DIVTY 273
           R  L +Y T+I   C   M  EA + +Q  + R+G                    DI  +
Sbjct: 16  RHTLHSYCTMIHFLCTHQMFSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVF 75

Query: 274 NSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKG 333
           + LI  +   G +R+A   +R     T  H  +       CR   LE  ++L+      G
Sbjct: 76  SGLITAYLESGFLRDAIECYR----LTREHKLWVPF--DTCRKV-LEHLMKLKYFKLVWG 128

Query: 334 VYPGVVT---------YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
            Y  ++          +N ++ + CK+G IR A  + + + +  + P  V+ NTL+N Y 
Sbjct: 129 FYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 188

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           ++GD     ++K+ ML +G+  D +TY  LI+G CK  +MD A EL   ML  G  P+  
Sbjct: 189 RLGDLDEGFRLKSAMLASGVQPDXYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGV 248

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
           +++ L+DG+C K   +  +++    +S+ L  D+  Y  LI   CKK  +  A  L + M
Sbjct: 249 TFTTLIDGHCKKGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEM 308

Query: 505 QGNGILGDSVIYTSLAYAYWRAGE 528
              G+  D + YT+L     + G+
Sbjct: 309 VMKGLKPDKITYTTLIDGCCKEGD 332



 Score = 65.5 bits (158), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 3/139 (2%)

Query: 141 ANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANI 200
            +LK   D   + D+M +  L P     T L++   K+   D  ++  K+M+Q  +  + 
Sbjct: 296 GDLKQAND---LIDEMVMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDD 352

Query: 201 HLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDR 260
             Y  LI   C+       EK+L EM    ++ D  TY  +I  +CKKG  ++   +   
Sbjct: 353 VAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSRLLKE 412

Query: 261 MEREGISPDIVTYNSLIHG 279
           M+R G  P +VTYN L++G
Sbjct: 413 MQRNGHVPSVVTYNVLMNG 431


>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Cucumis sativus]
          Length = 786

 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 160/561 (28%), Positives = 272/561 (48%), Gaps = 22/561 (3%)

Query: 36  SSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFK 95
           S+L    + K+LL L      P L+  FFKWA S V  ++H+ +S+  ++H++ + + + 
Sbjct: 125 SALAPIWVSKILLGLR---EDPKLALKFFKWAGSQV-GFRHTTESYCIIVHLVFRARMYT 180

Query: 96  SAQNMLEKIAL--RDFLSTP--SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQ 151
            A + ++++ +  R  +  P  ++ + L    +     S V   L   +  L + ++  +
Sbjct: 181 DAHDTVKEVIMNSRMDMGFPVCNIFDMLWSTRNICVSGSGVFDVLFSVFVELGLLEEANE 240

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
            F +MR    +P   +C  LL+ L+K     +V K +  M+  G+  ++  YNV+I   C
Sbjct: 241 CFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLC 300

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           K  D++   +L  +M    +  D+ TYN+LI  Y K G   E  ++ + M+  G  PDI+
Sbjct: 301 KEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDII 360

Query: 272 TYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           TYN LI+ +C+  +M  A   F ++K  G  PN VTY+TLID +C+   ++ A++L   M
Sbjct: 361 TYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDM 420

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
              G+ P   TY S++   CK G + +A +LLN+M +  +  + VT   L++  CK G  
Sbjct: 421 RRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRM 480

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
             A +V   ML+ G+  +Q  Y AL+HG+ KA+ M+ A ++L  M +    P    Y  +
Sbjct: 481 IEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSI 540

Query: 450 VDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGI 509
           + G+C++   E    +L+E  SRG+  +  +   +I  + K  K   A   F  MQ  G+
Sbjct: 541 IWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGV 600

Query: 510 LGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFW 569
               V Y  L     +AG  +   D    M    L   + +Y S      K+N I     
Sbjct: 601 EATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIES--- 657

Query: 570 SHVVDRGLMSKHIFKEMQLRN 590
                    +K +F EMQ R 
Sbjct: 658 ---------AKKLFDEMQCRG 669



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 131/473 (27%), Positives = 228/473 (48%), Gaps = 23/473 (4%)

Query: 77  SLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVL--NALVKIHDDPDGNSHVLS 134
           S+ ++  MI  L K    ++++ +   + +R+   +P V+  N+L+      DG      
Sbjct: 288 SVFTYNVMIDYLCKEGDLENSRRLF--VQMREMGLSPDVVTYNSLI------DG------ 333

Query: 135 WLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQL 194
                Y  +   ++   +F++M+    +P +     L+N   K       ++ + +M   
Sbjct: 334 -----YGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNN 388

Query: 195 GVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEA 254
           G+  N+  Y+ LI A CK   +    KL  +M    +  + FTY +LI   CK G   EA
Sbjct: 389 GLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEA 448

Query: 255 LAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDG 312
             + + M + G+  +IVTY +L+ G C+ GRM EA  +FR +   G +PN   YT L+ G
Sbjct: 449 WKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHG 508

Query: 313 YCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPD 372
           Y +A  +E+A+++ + M    + P ++ Y SI+   C + ++ +   +L EM  + I+ +
Sbjct: 509 YIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISAN 568

Query: 373 NVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLF 432
            V   T+I+AY K G ++ A+     M + G+     TY  LI G CKA  +++A +   
Sbjct: 569 PVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFC 628

Query: 433 GMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKE 492
            ML  G  P+   Y+ L+DG C  N  E+  KL DE   RG+  D++ + ALI    K  
Sbjct: 629 RMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHG 688

Query: 493 KVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
            +  A  L + M    I  D  +YTSL   + + GE        ++M  + ++
Sbjct: 689 NLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGIL 741



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 107/414 (25%), Positives = 185/414 (44%), Gaps = 37/414 (8%)

Query: 134 SWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQ 193
           S L+  +    M Q  +++F  MR   L+P+    T L+++  K       WK+   M+Q
Sbjct: 398 STLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQ 457

Query: 194 LGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYE 253
            GV  NI  Y  L+   CK+  + + E++   M    +  +   Y  L+  Y K     +
Sbjct: 458 AGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMED 517

Query: 254 ALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLID 311
           A+ +  +M    I PD++ Y S+I G C + ++ E + +  ++K  G + N V  TT+ID
Sbjct: 518 AMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIID 577

Query: 312 GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAP 371
            Y +A    +AL   + M   GV   +VTY  ++  LCK G +  A              
Sbjct: 578 AYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELA-------------- 623

Query: 372 DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
                   ++ +C             RML  GL  +   Y +LI G CK   ++ AK+L 
Sbjct: 624 --------VDYFC-------------RMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLF 662

Query: 432 FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
             M   G +P   +++ L+DG     N +  L L+       +  D+ VY +L+  F + 
Sbjct: 663 DEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQC 722

Query: 492 EKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
            ++  A++ FN M   GIL + V+   L   Y++ G+     ++ ++M R  L+
Sbjct: 723 GELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEMERMGLI 776



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 83/293 (28%), Positives = 135/293 (46%), Gaps = 2/293 (0%)

Query: 122 IHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLT 181
           + D    N  V + LV  Y   +  +D +++  QM   N+ P L     ++      R  
Sbjct: 491 LKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKL 550

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
           +    + ++M   G+ AN  +   +I A  K+           EM+   V A + TY  L
Sbjct: 551 EETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVL 610

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGA 299
           I   CK G+   A+    RM   G+ P++  Y SLI G C+   +  A++LF ++  +G 
Sbjct: 611 IDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGM 670

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
           TP+   +T LIDG  +  +L+EAL L   M    +   +  Y S++    + G +  A +
Sbjct: 671 TPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARK 730

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYK 412
             NEM EK I P+ V C  L+  Y K G    A+++KN M   GL+ +  T +
Sbjct: 731 FFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEMERMGLITESATMQ 783


>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Vitis vinifera]
          Length = 939

 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 141/516 (27%), Positives = 265/516 (51%), Gaps = 6/516 (1%)

Query: 57  PSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIA-LRDFLSTPSV 115
           P+ S  FF++  S   N++ +++S+  ++HIL++ + +   +  L ++  L  F    +V
Sbjct: 82  PTASLGFFQFV-SKQQNFRPNVKSYCKLVHILSRGRMYDETRAYLNQLVDLCKFKDRGNV 140

Query: 116 L-NALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNS 174
           + + LV ++ +   +  V   ++  Y    +T++ L VFD M     +P L +C  LLN+
Sbjct: 141 IWDELVGVYREFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNN 200

Query: 175 LAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRAD 234
           L K+  T     VY++M+++G+V ++ + +++++A CK   VD+    + +ME   V  +
Sbjct: 201 LVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPN 260

Query: 235 LFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR 294
           + TY++LI  Y   G    A  V   M  +G+S ++VTY  LI G+C++ +M EA ++ R
Sbjct: 261 IVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLR 320

Query: 295 DIK---GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
            ++      P+   Y  LIDGYCR   +++A+RL + M   G+   +   NS++   CK 
Sbjct: 321 GMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKR 380

Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
           G I +A  ++  M +  + PD+ + NTL++ YC+ G T+ A  + ++ML+ G+     TY
Sbjct: 381 GEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTY 440

Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
             L+ G C+    D A ++   M+  G +P    YS L+DG     N E    L  + ++
Sbjct: 441 NTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILA 500

Query: 472 RGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKA 531
           RG       +  +I   CK  K+  A+ +F+ M+  G   D + Y +L   Y +A     
Sbjct: 501 RGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQ 560

Query: 532 CSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDL 567
              +   M R  +  ++++Y S  +   K   ++++
Sbjct: 561 AFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEV 596



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 149/544 (27%), Positives = 228/544 (41%), Gaps = 86/544 (15%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHV 132
           N K    S+ T++    +  H   A N+ +K+       T    N L+K      G   V
Sbjct: 397 NLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLK------GLCRV 450

Query: 133 LSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMV 192
            ++            D LQ++  M    + P     + LL+ L K    +    ++K ++
Sbjct: 451 GAF-----------DDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDIL 499

Query: 193 QLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHY 252
             G   +   +N +I   CK   + + E++  +M+      D  TY TLI  YCK     
Sbjct: 500 ARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVG 559

Query: 253 EALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLI 310
           +A  V+  MERE ISP I  YNSLI G  +  R+ E   L  +  I+G TPN VTY  LI
Sbjct: 560 QAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALI 619

Query: 311 D-----------------------------------GYCRANDLEEALRLREVMAAKGVY 335
           D                                   G  R   ++EA  L + M   G +
Sbjct: 620 DGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFF 679

Query: 336 P--------------------------------GVVTYNSILRKLCKEGRIRDANRLLNE 363
           P                                  + YN  +  LCK G++ DA R  + 
Sbjct: 680 PDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSM 739

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
           ++ K   PDN T  TLI+ Y   G+   A ++++ ML  GL+ +  TY ALI+G CK++ 
Sbjct: 740 LSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSEN 799

Query: 424 MDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRA 483
           +D A+ L   +   G  P+  +Y+ L+DGYC   N +A  KL D+ +  G+   V  Y A
Sbjct: 800 VDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSA 859

Query: 484 LIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRR 543
           LI   CK   ++ + +L N M   G+    + Y +L   Y R+GE +    + D M+ R 
Sbjct: 860 LINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGYIRSGEMQKIHKLYDMMHIRC 919

Query: 544 LMIT 547
           L  T
Sbjct: 920 LSTT 923



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 30/126 (23%), Positives = 61/126 (48%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           ++F ++    L P++     L++   K    D  +K+  KM++ G+  ++  Y+ LI+  
Sbjct: 805 RLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGL 864

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           CK  D+++  KLL +M    V + L  Y TL+  Y + G   +   + D M    +S   
Sbjct: 865 CKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGYIRSGEMQKIHKLYDMMHIRCLSTTA 924

Query: 271 VTYNSL 276
           +++  +
Sbjct: 925 ISHKQV 930


>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
 gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
          Length = 609

 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 155/555 (27%), Positives = 278/555 (50%), Gaps = 31/555 (5%)

Query: 15  KTISAIMLKGHWAK---LLNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAV 71
           +T++AI+   H  +    + P+++    ++   +++  + N      L+ AFF+WA +++
Sbjct: 11  RTVTAILNLLHSGRPWSAIEPDLSPFSGASTTPRIVGRVVNSLKDAKLALAFFRWAPASI 70

Query: 72  PNYKHSLQSHWTMIHILTKNKHFKSAQNMLEK--------------IALRDFLSTPSVLN 117
           P + H+  S  +++ +L + K  + A ++                 I +  F +   +  
Sbjct: 71  PGFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHA 130

Query: 118 ALVKIHD------DPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVL 171
           AL  + +       PD  +H  + ++   AN     DG    D +R     P++   T L
Sbjct: 131 ALELLEEMKSAGFAPDAFTH--TPIITAMANAG-DLDG--AMDHLRSMGCDPNVVTYTAL 185

Query: 172 LNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDV 231
           + + A+ +  +   K+ ++M + G   N+  YNVL+ A CK S V   + ++ +M     
Sbjct: 186 IAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGF 245

Query: 232 RADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARR 291
             ++ T+N+L+  +CK+G   +A  +   M  +G+ P++VTY++LI G C+  +  EA+ 
Sbjct: 246 APNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKE 305

Query: 292 LFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLC 349
           +  ++K  G TP+  TY+ LI G C+A+ +EEA ++   MA  G  P VV Y+SI+   C
Sbjct: 306 VLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFC 365

Query: 350 KEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLML-DQ 408
           K G++ +A + L EM +++ +PD VT NT+I+  CK+G  A A  +  +M E+G +L D 
Sbjct: 366 KSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDV 425

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
            TY  +I+G CK+  +  A++LL  M  AG +P   +Y+ ++DG C     E    LL  
Sbjct: 426 VTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQG 485

Query: 469 FVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
               G   +V  Y  LI   CK  KVD A+R+   M+  G   + V Y ++      +G 
Sbjct: 486 MKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGR 545

Query: 529 PKACSDILDDMYRRR 543
            K    ++  M   R
Sbjct: 546 IKEAQQLVQRMKDGR 560



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 85/304 (27%), Positives = 147/304 (48%), Gaps = 5/304 (1%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEA 322
           G S    ++NSL+    R  + REA  LFR   +    P+  +Y  +I G+C A DL  A
Sbjct: 72  GFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAA 131

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
           L L E M + G  P   T+  I+  +   G   D +  ++ +      P+ VT   LI A
Sbjct: 132 LELLEEMKSAGFAPDAFTHTPIITAMANAG---DLDGAMDHLRSMGCDPNVVTYTALIAA 188

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           + +      AMK+   M E G   +  TY  L+   CK   +  A++++  M++ GF+P+
Sbjct: 189 FARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPN 248

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +++ LVDG+C + N +   KLL   V++G+  +V  Y ALI   CK +K   A+ +  
Sbjct: 249 VMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLE 308

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDN 562
            M+  G+  D+  Y++L +   +A + +    +L  M        + +Y S   ++ K  
Sbjct: 309 EMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSG 368

Query: 563 EILD 566
           ++L+
Sbjct: 369 KLLE 372



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 58/251 (23%), Positives = 111/251 (44%), Gaps = 23/251 (9%)

Query: 81  HWTMIHILTKNKHFKSAQNMLEKIALR----DFLSTPSVLNALVKI-------------H 123
           + ++IH   K+     AQ  L+++  +    D ++  +V++ L K+              
Sbjct: 357 YSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQ 416

Query: 124 DDPDGNSHVLSWLVIFYANLK--MTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAK-DRL 180
           +  D    V+++  +     K  M  +  ++ D+M      P +   T +++ L K  RL
Sbjct: 417 ESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRL 476

Query: 181 TDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNT 240
            +  + + + M + G   N+  Y  LI   CK+  VD+ E+++ EM       +L TYNT
Sbjct: 477 EEAEY-LLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNT 535

Query: 241 LIALYCKKGMHYEALAVQDRME--REGISPDIVTYNSLIHGFCREGRMREARRLFRDIKG 298
           ++   C  G   EA  +  RM+  R   SPD  TY ++++       ++EA +L   +K 
Sbjct: 536 MVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQMKS 595

Query: 299 ATPNHVTYTTL 309
            T +     +L
Sbjct: 596 TTSSQQEQGSL 606


>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
          Length = 1037

 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 141/515 (27%), Positives = 264/515 (51%), Gaps = 6/515 (1%)

Query: 57  PSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIA-LRDFLSTPSV 115
           P+ S  FF++  S   N++ +++S+  ++HIL++ + +   +  L ++  L  F    +V
Sbjct: 82  PTASLGFFQFV-SKQQNFRPNVKSYCKLVHILSRGRMYDETRAYLNQLVDLCKFKDRGNV 140

Query: 116 L-NALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNS 174
           + + LV ++ +   +  V   ++  Y    +T++ L VFD M     +P L +C  LLN+
Sbjct: 141 IWDELVGVYREFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNN 200

Query: 175 LAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRAD 234
           L K+  T     VY++M+++G+V ++ + +++++A CK   VD+    + +ME   V  +
Sbjct: 201 LVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPN 260

Query: 235 LFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR 294
           + TY++LI  Y   G    A  V   M  +G+S ++VTY  LI G+C++ +M EA ++ R
Sbjct: 261 IVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLR 320

Query: 295 DIK---GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
            ++      P+   Y  LIDGYCR   +++A+RL + M   G+   +   NS++   CK 
Sbjct: 321 GMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKR 380

Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
           G I +A  ++  M +  + PD+ + NTL++ YC+ G T+ A  + ++ML+ G+     TY
Sbjct: 381 GEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTY 440

Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
             L+ G C+    D A ++   M+  G +P    YS L+DG     N E    L  + ++
Sbjct: 441 NTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILA 500

Query: 472 RGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKA 531
           RG       +  +I   CK  K+  A+ +F+ M+  G   D + Y +L   Y +A     
Sbjct: 501 RGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQ 560

Query: 532 CSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
              +   M R  +  ++++Y S  +   K   +++
Sbjct: 561 AFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVE 595



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 140/495 (28%), Positives = 220/495 (44%), Gaps = 24/495 (4%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHV 132
           N K    S+ T++    +  H   A N+ +K+       T    N L+K      G   V
Sbjct: 397 NLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLK------GLCRV 450

Query: 133 LSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMV 192
            ++            D LQ++  M    + P     + LL+ L K    +    ++K ++
Sbjct: 451 GAF-----------DDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDIL 499

Query: 193 QLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHY 252
             G   +   +N +I   CK   + + E++  +M+      D  TY TLI  YCK     
Sbjct: 500 ARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVG 559

Query: 253 EALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLI 310
           +A  V+  MERE ISP I  YNSLI G  +  R+ E   L  +  I+G TPN VTY  LI
Sbjct: 560 QAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALI 619

Query: 311 DGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIA 370
           DG+C+   L++A      M   G+   ++  ++++  L + GRI +AN L+ +M +    
Sbjct: 620 DGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFF 679

Query: 371 PDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL 430
           PD+         Y  I   A ++   +   +  L+ +   Y   I G CK  ++D A+  
Sbjct: 680 PDHECFLKSDIRYAAIQKIADSL---DESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRF 736

Query: 431 LFGMLD-AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFC 489
            F ML   GF P   +Y  L+ GY    N +   +L DE + RGL  ++  Y ALI   C
Sbjct: 737 -FSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLC 795

Query: 490 KKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLK 549
           K E VD AQRLF+ +   G+  + V Y +L   Y + G   A   + D M    +  ++ 
Sbjct: 796 KSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVV 855

Query: 550 IYRSFSASYAKDNEI 564
            Y +      K  +I
Sbjct: 856 TYSALINGLCKHGDI 870



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 131/500 (26%), Positives = 216/500 (43%), Gaps = 62/500 (12%)

Query: 23  KGHWAKLLNPNIASSLTSTAIHKVLLN----LYNCCHIPSLSCAFFKWAESAVPNYKHSL 78
           +GH ++  N  +   +    I   +L     L   C + +   A   W            
Sbjct: 415 EGHTSEAFN--LCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDE 472

Query: 79  QSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALV-----------------K 121
             + T++  L K ++F+ A  + + I  R F  +    N ++                 K
Sbjct: 473 VGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDK 532

Query: 122 IHD---DPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKD 178
           + D    PDG ++    L+  Y          +V   M    + P +     L++ L K 
Sbjct: 533 MKDLGCSPDGITY--RTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKS 590

Query: 179 RLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTY 238
           R       +  +M   G+  NI  Y  LI   CK   +DK      EM    + A++   
Sbjct: 591 RRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIIC 650

Query: 239 NTLIALYCKKGMHYEALAVQDRMEREGISPD----------------------------- 269
           +T+++   + G   EA  +  +M   G  PD                             
Sbjct: 651 STMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFL 710

Query: 270 ---IVTYNSLIHGFCREGRMREARRLFR--DIKGATPNHVTYTTLIDGYCRANDLEEALR 324
               + YN  I G C+ G++ +ARR F    +KG  P++ TY TLI GY  A +++EA R
Sbjct: 711 LPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFR 770

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           LR+ M  +G+ P +VTYN+++  LCK   +  A RL +++++K + P+ VT NTLI+ YC
Sbjct: 771 LRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYC 830

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           KIG+  +A K+K++M+E G+     TY ALI+G CK  +++ + +LL  M+ AG      
Sbjct: 831 KIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLI 890

Query: 445 SYSWLVDGYCNKNNEEALLK 464
            Y  LV G    +N   + K
Sbjct: 891 EYCTLVQGGFKTSNYNEMSK 910


>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
          Length = 839

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 141/516 (27%), Positives = 265/516 (51%), Gaps = 6/516 (1%)

Query: 57  PSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIA-LRDFLSTPSV 115
           P+ S  FF++  S   N++ +++S+  ++HIL++ + +   +  L ++  L  F    +V
Sbjct: 48  PTASLGFFQFV-SKQQNFRPNVKSYCKLVHILSRGRMYDETRAYLNQLVDLCKFKDRGNV 106

Query: 116 L-NALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNS 174
           + + LV ++ +   +  V   ++  Y    +T++ L VFD M     +P L +C  LLN+
Sbjct: 107 IWDELVGVYREFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNN 166

Query: 175 LAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRAD 234
           L K+  T     VY++M+++G+V ++ + +++++A CK   VD+    + +ME   V  +
Sbjct: 167 LVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPN 226

Query: 235 LFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR 294
           + TY++LI  Y   G    A  V   M  +G+S ++VTY  LI G+C++ +M EA ++ R
Sbjct: 227 IVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLR 286

Query: 295 DIK---GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
            ++      P+   Y  LIDGYCR   +++A+RL + M   G+   +   NS++   CK 
Sbjct: 287 GMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKR 346

Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
           G I +A  ++  M +  + PD+ + NTL++ YC+ G T+ A  + ++ML+ G+     TY
Sbjct: 347 GEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTY 406

Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
             L+ G C+    D A ++   M+  G +P    YS L+DG     N E    L  + ++
Sbjct: 407 NTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILA 466

Query: 472 RGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKA 531
           RG       +  +I   CK  K+  A+ +F+ M+  G   D + Y +L   Y +A     
Sbjct: 467 RGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQ 526

Query: 532 CSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDL 567
              +   M R  +  ++++Y S  +   K   ++++
Sbjct: 527 AFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEV 562



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 130/473 (27%), Positives = 218/473 (46%), Gaps = 69/473 (14%)

Query: 161 LMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVE 220
           L+P   A  VL++   +    D   ++  +M++LG+  N+ + N LI+  CK  ++ + E
Sbjct: 294 LVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAE 353

Query: 221 KLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGF 280
            ++  M   +++ D ++YNTL+  YC++G   EA  + D+M +EGI P ++TYN+L+ G 
Sbjct: 354 GVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGL 413

Query: 281 CREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGV 338
           CR G   +A +++  +  +G  P+ V Y+TL+DG  +  + E A  L + + A+G     
Sbjct: 414 CRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSR 473

Query: 339 VTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKN- 397
           +T+N+++  LCK G++ +A  + ++M +   +PD +T  TLI+ YCK  +   A KVK  
Sbjct: 474 ITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGA 533

Query: 398 ------------------------RMLEA----------GLMLDQFTYKALIHGFCKAKE 423
                                   R++E           GL  +  TY ALI G+CK   
Sbjct: 534 MEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGM 593

Query: 424 MDIAKELLFGMLDAGFSPSYCSYSWLVDG-YCNKNNEEALLKL----------------- 465
           +D A    F M + G S +    S +V G Y     +EA L +                 
Sbjct: 594 LDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLK 653

Query: 466 --------------LDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILG 511
                         LDE     L  +  VY   I   CK  KVD A+R F+++   G + 
Sbjct: 654 SDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVP 713

Query: 512 DSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
           D+  Y +L + Y  AG       + D+M RR L+  +  Y +      K   +
Sbjct: 714 DNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENV 766



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 137/470 (29%), Positives = 212/470 (45%), Gaps = 24/470 (5%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHV 132
           N K    S+ T++    +  H   A N+ +K+       T    N L+K      G   V
Sbjct: 363 NLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLK------GLCRV 416

Query: 133 LSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMV 192
            ++            D LQ++  M    + P     + LL+ L K    +    ++K ++
Sbjct: 417 GAF-----------DDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDIL 465

Query: 193 QLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHY 252
             G   +   +N +I   CK   + + E++  +M+      D  TY TLI  YCK     
Sbjct: 466 ARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVG 525

Query: 253 EALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLI 310
           +A  V+  MERE ISP I  YNSLI G  +  R+ E   L  +  I+G TPN VTY  LI
Sbjct: 526 QAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALI 585

Query: 311 DGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIA 370
           DG+C+   L++A      M   G+   ++  ++++  L + GRI +AN L+ +M +    
Sbjct: 586 DGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFF 645

Query: 371 PDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL 430
           PD+         Y  I   A ++   +   +  L+ +   Y   I G CK  ++D A+  
Sbjct: 646 PDHECFLKSDIRYAAIQKIADSL---DESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRF 702

Query: 431 LFGMLD-AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFC 489
            F ML   GF P   +Y  L+ GY    N +   +L DE + RGL  ++  Y ALI   C
Sbjct: 703 -FSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLC 761

Query: 490 KKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
           K E VD AQRLF+ +   G+  + V Y +L   Y + G   A   + D M
Sbjct: 762 KSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKM 811



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 113/440 (25%), Positives = 189/440 (42%), Gaps = 62/440 (14%)

Query: 23  KGHWAKLLNPNIASSLTSTAIHKVLLN----LYNCCHIPSLSCAFFKWAESAVPNYKHSL 78
           +GH ++  N  +   +    I   +L     L   C + +   A   W            
Sbjct: 381 EGHTSEAFN--LCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDE 438

Query: 79  QSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALV-----------------K 121
             + T++  L K ++F+ A  + + I  R F  +    N ++                 K
Sbjct: 439 VGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDK 498

Query: 122 IHD---DPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKD 178
           + D    PDG ++    L+  Y          +V   M    + P +     L++ L K 
Sbjct: 499 MKDLGCSPDGITY--RTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKS 556

Query: 179 RLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTY 238
           R    V  +  +M   G+  NI  Y  LI   CK   +DK      EM    + A++   
Sbjct: 557 RRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIIC 616

Query: 239 NTLIALYCKKGMHYEALAVQDRMEREGISPD----------------------------- 269
           +T+++   + G   EA  +  +M   G  PD                             
Sbjct: 617 STMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFL 676

Query: 270 ---IVTYNSLIHGFCREGRMREARRLFR--DIKGATPNHVTYTTLIDGYCRANDLEEALR 324
               + YN  I G C+ G++ +ARR F    +KG  P++ TY TLI GY  A +++EA R
Sbjct: 677 LPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFR 736

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           LR+ M  +G+ P +VTYN+++  LCK   +  A RL +++++K + P+ VT NTLI+ YC
Sbjct: 737 LRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYC 796

Query: 385 KIGDTASAMKVKNRMLEAGL 404
           KIG+  +A K+K++M+E G+
Sbjct: 797 KIGNMDAAFKLKDKMIEEGI 816



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 57/145 (39%), Positives = 84/145 (57%), Gaps = 2/145 (1%)

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
           ++ N  +YN+ I   CK+  VD   +    +  K    D FTY TLI  Y   G   EA 
Sbjct: 676 LLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAF 735

Query: 256 AVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGY 313
            ++D M R G+ P+IVTYN+LI+G C+   +  A+RLF  +  KG  PN VTY TLIDGY
Sbjct: 736 RLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGY 795

Query: 314 CRANDLEEALRLREVMAAKGVYPGV 338
           C+  +++ A +L++ M  +G+ P +
Sbjct: 796 CKIGNMDAAFKLKDKMIEEGISPSI 820



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 67/123 (54%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D  + F  + +   +P       L++  +     D  +++  +M++ G+V NI  YN LI
Sbjct: 698 DARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALI 757

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           +  CKS +VD+ ++L  ++  K +  ++ TYNTLI  YCK G    A  ++D+M  EGIS
Sbjct: 758 NGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGIS 817

Query: 268 PDI 270
           P I
Sbjct: 818 PSI 820


>gi|410109953|gb|AFV61056.1| pentatricopeptide repeat-containing protein 11, partial [Nashia
           inaguensis]
          Length = 431

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 130/428 (30%), Positives = 229/428 (53%), Gaps = 4/428 (0%)

Query: 62  AFFKWAES-AVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS-VLNAL 119
           +FF W  S A   ++H+L S+ TMIH L  ++    A+++++ +  R    + S V   +
Sbjct: 2   SFFTWLSSPANSTFRHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFATI 61

Query: 120 VKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDR 179
           ++       + +V S L+  Y      +D ++ +   R H L      C  +L  L K R
Sbjct: 62  LETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLR 121

Query: 180 LTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYN 239
              +VW  Y+++++ G  A+++ +N+L+H  CK  D+   + +   +    +R  + +YN
Sbjct: 122 YFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYN 181

Query: 240 TLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IK 297
           TL+  Y + G   E   ++  M   G+ PD+ TY+ LI+G C+E +M +A  LF +  +K
Sbjct: 182 TLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVK 241

Query: 298 GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDA 357
           G  PN VT+TTLI G+C+   ++ A+ + + M ++ + P ++TYN+++  LCK+G ++ A
Sbjct: 242 GLIPNGVTFTTLIXGHCKNGRVDLAMEIYKXMLSQSLLPDLITYNTLIYGLCKKGDLKQA 301

Query: 358 NRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHG 417
           + L++EM+ K + PD  T  TLI+  CK GD  +A K + RM++  + LD   Y ALI G
Sbjct: 302 HXLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFKHRKRMIQGNIRLDDVAYTALISG 361

Query: 418 FCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVD 477
            C+      A+++L  ML  G  P   +Y+ +++ +C K +     KLL E    G    
Sbjct: 362 LCQEGRSVDAEKMLREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHVPS 421

Query: 478 VSVYRALI 485
           V  Y  L+
Sbjct: 422 VVTYNVLM 429



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 94/279 (33%), Positives = 146/279 (52%), Gaps = 2/279 (0%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           G    +  +N L+H FC++G +R A+ +F  I   G  P+ V+Y TL++GY R  DL+E 
Sbjct: 137 GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEG 196

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            RL+  M A GV P V TY+ ++  LCKE ++ DAN L +EM  K + P+ VT  TLI  
Sbjct: 197 FRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIXG 256

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +CK G    AM++   ML   L+ D  TY  LI+G CK  ++  A  L+  M   G  P 
Sbjct: 257 HCKNGRVDLAMEIYKXMLSQSLLPDLITYNTLIYGLCKKGDLKQAHXLIDEMSMKGLKPD 316

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ L+DG C + + +   K     +   + +D   Y ALI   C++ +   A+++  
Sbjct: 317 KFTYTTLIDGCCKEGDLDTAFKHRKRMIQGNIRLDDVAYTALISGLCQEGRSVDAEKMLR 376

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
            M   G+  D   YT +   + + G+    S +L +M R
Sbjct: 377 EMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEMQR 415



 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 64/128 (50%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           + D+M +  L P     T L++   K+   D  +K  K+M+Q  +  +   Y  LI   C
Sbjct: 304 LIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFKHRKRMIQGNIRLDDVAYTALISGLC 363

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           +       EK+L EM    ++ D+ TY  +I  +CKKG  ++   +   M+R G  P +V
Sbjct: 364 QEGRSVDAEKMLREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHVPSVV 423

Query: 272 TYNSLIHG 279
           TYN L++G
Sbjct: 424 TYNVLMNG 431


>gi|410109889|gb|AFV61024.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           camara]
          Length = 431

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 132/428 (30%), Positives = 231/428 (53%), Gaps = 4/428 (0%)

Query: 62  AFFKWAES-AVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS-VLNAL 119
           +FF W  S A   ++H+L S+ TMIH L  ++    A++++E +  R    + S V  A+
Sbjct: 2   SFFTWLSSPANSTFRHTLHSYCTMIHFLCTHQLLSEAKSLIEVVVSRKGKGSASAVFAAV 61

Query: 120 VKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDR 179
           ++   +   + +V S L+  Y      +D ++ +   R H L      C  +L  L K +
Sbjct: 62  LETKGNQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLK 121

Query: 180 LTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYN 239
              +VW  Y+++++ G  A+++ +N+L+H  CK  D+   + +   +    +R  + +YN
Sbjct: 122 YFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYN 181

Query: 240 TLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IK 297
           TL+  Y + G   E   ++  M   G+ PD+ TY+ LI+G C+E +M  A  LF +  +K
Sbjct: 182 TLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVK 241

Query: 298 GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDA 357
           G  PN VT+TTLIDG+C+   ++ A+ + + M ++ + P ++TYN+++  LCK+G ++ A
Sbjct: 242 GLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQA 301

Query: 358 NRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHG 417
           + L++EM+ K + PD  T  TLI+  CK GD  +A + + RM++  + LD   Y ALI G
Sbjct: 302 HDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISG 361

Query: 418 FCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVD 477
            C+      A+++L  ML  G  P   +Y+ +V+ +C K +     KLL E    G    
Sbjct: 362 LCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIVNEFCKKGDVWKGSKLLKEMQRDGHAPS 421

Query: 478 VSVYRALI 485
           V  Y  L+
Sbjct: 422 VVTYNVLM 429



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 92/279 (32%), Positives = 149/279 (53%), Gaps = 2/279 (0%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           G    +  +N L+H FC++G +R A+ +F  I   G  P+ V+Y TL++GY R  DL+E 
Sbjct: 137 GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEG 196

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            RL+  M A GV P V TY+ ++  LCKE ++  AN L +EM  K + P+ VT  TLI+ 
Sbjct: 197 FRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDG 256

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +CK G    AM++  +ML   L+ D  TY  LI+G CK  ++  A +L+  M   G  P 
Sbjct: 257 HCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPD 316

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ L+DG C + + +   +     +   + +D   Y ALI   C++ +   A+++  
Sbjct: 317 KFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLR 376

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
            M   G+  D+  YT +   + + G+    S +L +M R
Sbjct: 377 EMLSVGLKPDTGTYTMIVNEFCKKGDVWKGSKLLKEMQR 415



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 75/269 (27%), Positives = 129/269 (47%), Gaps = 16/269 (5%)

Query: 269 DIVTYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
           DI  ++ LI  +   G +R+A   +R     T  H  +       CR   LE  ++L+  
Sbjct: 71  DIYVFSGLITAYLESGFLRDAIECYR----LTREHKLWVPF--DTCR-KVLEHLMKLKYF 123

Query: 329 MAAKGVYPGVVT---------YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTL 379
               G Y  ++          +N ++ + CK+G IR A  + + + +  + P  V+ NTL
Sbjct: 124 KLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTL 183

Query: 380 INAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGF 439
           +N Y ++GD     ++K+ ML +G+  D +TY  LI+G CK  +MD A  L   ML  G 
Sbjct: 184 MNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGL 243

Query: 440 SPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQR 499
            P+  +++ L+DG+C     +  +++  + +S+ L  D+  Y  LI   CKK  +  A  
Sbjct: 244 VPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHD 303

Query: 500 LFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
           L + M   G+  D   YT+L     + G+
Sbjct: 304 LIDEMSMKGLKPDKFTYTTLIDGCCKEGD 332



 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 40/139 (28%), Positives = 69/139 (49%), Gaps = 3/139 (2%)

Query: 141 ANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANI 200
            +LK   D   + D+M +  L P     T L++   K+   D  ++  K+M+Q  +  + 
Sbjct: 296 GDLKQAHD---LIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDD 352

Query: 201 HLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDR 260
             Y  LI   C+       EK+L EM    ++ D  TY  ++  +CKKG  ++   +   
Sbjct: 353 VAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIVNEFCKKGDVWKGSKLLKE 412

Query: 261 MEREGISPDIVTYNSLIHG 279
           M+R+G +P +VTYN L++G
Sbjct: 413 MQRDGHAPSVVTYNVLMNG 431


>gi|410109899|gb|AFV61029.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           micrantha]
          Length = 431

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 131/428 (30%), Positives = 231/428 (53%), Gaps = 4/428 (0%)

Query: 62  AFFKWAES-AVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS-VLNAL 119
           +FF W  S A   ++H+L S+ TMIH L  ++    A++++E +  R    + S V  A+
Sbjct: 2   SFFTWLSSPANSTFRHTLHSYCTMIHFLCTHQMLSEAKSLIEVVVSRKGKGSASAVFAAV 61

Query: 120 VKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDR 179
           ++   +   + +V S L+  Y      +D ++ +   R H L      C  +L  L K +
Sbjct: 62  LETKGNQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLK 121

Query: 180 LTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYN 239
              +VW  Y+++++ G  A+++ +N+L+H  CK  D+   + +   +    +R  + +YN
Sbjct: 122 YFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYN 181

Query: 240 TLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IK 297
           TL+  Y + G   E   ++  M   G+ PD+ TY+ LI+G C+E +M  A  LF +  +K
Sbjct: 182 TLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANELFDEMLVK 241

Query: 298 GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDA 357
           G  PN VT+TTLIDG+C+   ++ A+ + + M ++ + P ++TYN+++  LCK+G ++ A
Sbjct: 242 GLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQA 301

Query: 358 NRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHG 417
           + L++EM+ K + PD  T  TLI+  CK GD  +A + + RM++  + LD   Y ALI G
Sbjct: 302 HDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISG 361

Query: 418 FCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVD 477
            C+      A+++L  ML  G  P   +Y+ +++ +C K +     KLL E    G    
Sbjct: 362 LCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMHRDGHAPS 421

Query: 478 VSVYRALI 485
           V  Y  L+
Sbjct: 422 VVTYNVLM 429



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 92/279 (32%), Positives = 150/279 (53%), Gaps = 2/279 (0%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           G    +  +N L+H FC++G +R A+ +F  I   G  P+ V+Y TL++GY R  DL+E 
Sbjct: 137 GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEG 196

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            RL+  M A GV P V TY+ ++  LCKE ++  AN L +EM  K + P+ VT  TLI+ 
Sbjct: 197 FRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNGVTFTTLIDG 256

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +CK G    AM++  +ML   L+ D  TY  LI+G CK  ++  A +L+  M   G  P 
Sbjct: 257 HCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPD 316

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ L+DG C + + +   +     +   + +D   Y ALI   C++ +   A+++  
Sbjct: 317 KFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLR 376

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
            M   G+  D+  YT +   + + G+    S +L +M+R
Sbjct: 377 EMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMHR 415



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 148/324 (45%), Gaps = 34/324 (10%)

Query: 232 RADLFTYNTLIALYCKKGMHYEALA-VQDRMEREGISP-----------------DIVTY 273
           R  L +Y T+I   C   M  EA + ++  + R+G                    DI  +
Sbjct: 16  RHTLHSYCTMIHFLCTHQMLSEAKSLIEVVVSRKGKGSASAVFAAVLETKGNQRSDIYVF 75

Query: 274 NSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKG 333
           + LI  +   G +R+A   +R     T  H  +       CR   LE  ++L+      G
Sbjct: 76  SGLITAYLESGFLRDAIECYR----LTREHKLWVPF--DTCRKV-LEHLMKLKYFKLVWG 128

Query: 334 VYPGVVT---------YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
            Y  ++          +N ++ + CK+G IR A  + + + +  + P  V+ NTL+N Y 
Sbjct: 129 FYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 188

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           ++GD     ++K+ ML +G+  D +TY  LI+G CK  +MD A EL   ML  G  P+  
Sbjct: 189 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNGV 248

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
           +++ L+DG+C     +  +++  + +S+ L  D+  Y  LI   CKK  +  A  L + M
Sbjct: 249 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEM 308

Query: 505 QGNGILGDSVIYTSLAYAYWRAGE 528
              G+  D   YT+L     + G+
Sbjct: 309 SMKGLKPDKFTYTTLIDGCCKEGD 332



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 68/139 (48%), Gaps = 3/139 (2%)

Query: 141 ANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANI 200
            +LK   D   + D+M +  L P     T L++   K+   D  ++  K+M+Q  +  + 
Sbjct: 296 GDLKQAHD---LIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDD 352

Query: 201 HLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDR 260
             Y  LI   C+       EK+L EM    ++ D  TY  +I  +CKKG  ++   +   
Sbjct: 353 VAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKE 412

Query: 261 MEREGISPDIVTYNSLIHG 279
           M R+G +P +VTYN L++G
Sbjct: 413 MHRDGHAPSVVTYNVLMNG 431


>gi|255660838|gb|ACU25588.1| pentatricopeptide repeat-containing protein [Neosparton
           ephedroides]
          Length = 418

 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 127/404 (31%), Positives = 217/404 (53%), Gaps = 3/404 (0%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS-VLNALVKIHDDPDGNSH 131
            ++H+L S+ TMIH L  ++    A+N+++ +  R    + S V  A+++       + +
Sbjct: 8   TFRHTLHSYCTMIHFLCTHQMLPEAKNLIQIVVSRKGKDSASAVFEAILEAKGAQRSDVY 67

Query: 132 VLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKM 191
           V S L+  Y       D L+ F   R H        C  +L    K +    VW  YK++
Sbjct: 68  VFSGLITAYLESGFLHDALECFRLTREHKFWVPFDTCRKVLEHFMKLKYFKSVWGFYKEI 127

Query: 192 VQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMH 251
           ++ G  A+++ +N+L+H  CK  ++   + +  E+    +R  + ++NTL+  Y + G  
Sbjct: 128 LECGYPASLYFFNILMHRFCKEGEMRLAQSVFDEITKWGLRPSVVSFNTLMNGYIRLGDL 187

Query: 252 YEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTL 309
            E   ++  M   GI PD+ TY+ LI+G C+E +M +A  LF ++   G  PN VT+TTL
Sbjct: 188 DEGFRLKSAMHGSGIQPDVYTYSVLINGLCKESKMNDANELFDEMIGNGLVPNGVTFTTL 247

Query: 310 IDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI 369
           IDG+C+   ++ A+   + M  +G  P ++TYN+++  LCKEG ++ A  L++EM+ K +
Sbjct: 248 IDGHCKTGSIDLAMEAYKEMLRQGFSPDLITYNTLIYGLCKEGDLKQAQDLIDEMSMKGL 307

Query: 370 APDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKE 429
            PD +T  TLI+  CK GD  +A K K RM++  + LD   Y ALI G C+  +   A++
Sbjct: 308 KPDKITYTTLIDGSCKEGDLETAFKYKKRMIKENIRLDDVAYTALISGLCREGQSVGAEK 367

Query: 430 LLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
           +L  ML  G  P   +Y+ +++ +C K + +   KLL E    G
Sbjct: 368 MLREMLSVGLKPDNGTYTMIINEFCKKGDVKMGSKLLKEMQRDG 411



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 105/348 (30%), Positives = 168/348 (48%), Gaps = 39/348 (11%)

Query: 232 RADLFTYNTLIALYCKKGMHYEALAVQDRMERE--------------------------- 264
           R+D++ ++ LI  Y + G  ++AL    R+ RE                           
Sbjct: 63  RSDVYVFSGLITAYLESGFLHDALECF-RLTREHKFWVPFDTCRKVLEHFMKLKYFKSVW 121

Query: 265 ---------GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGY 313
                    G    +  +N L+H FC+EG MR A+ +F +I   G  P+ V++ TL++GY
Sbjct: 122 GFYKEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDEITKWGLRPSVVSFNTLMNGY 181

Query: 314 CRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDN 373
            R  DL+E  RL+  M   G+ P V TY+ ++  LCKE ++ DAN L +EM    + P+ 
Sbjct: 182 IRLGDLDEGFRLKSAMHGSGIQPDVYTYSVLINGLCKESKMNDANELFDEMIGNGLVPNG 241

Query: 374 VTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFG 433
           VT  TLI+ +CK G    AM+    ML  G   D  TY  LI+G CK  ++  A++L+  
Sbjct: 242 VTFTTLIDGHCKTGSIDLAMEAYKEMLRQGFSPDLITYNTLIYGLCKEGDLKQAQDLIDE 301

Query: 434 MLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEK 493
           M   G  P   +Y+ L+DG C + + E   K     +   + +D   Y ALI   C++ +
Sbjct: 302 MSMKGLKPDKITYTTLIDGSCKEGDLETAFKYKKRMIKENIRLDDVAYTALISGLCREGQ 361

Query: 494 VDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
              A+++   M   G+  D+  YT +   + + G+ K  S +L +M R
Sbjct: 362 SVGAEKMLREMLSVGLKPDNGTYTMIINEFCKKGDVKMGSKLLKEMQR 409



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 78/300 (26%), Positives = 143/300 (47%), Gaps = 17/300 (5%)

Query: 239 NTLIALYCKKGMHYEALAVQDRMEREGIS-PDIVTYNSLIHGFCREGRMREARRLFRDIK 297
           N +  +  +KG    +   +  +E +G    D+  ++ LI  +   G + +A   FR   
Sbjct: 34  NLIQIVVSRKGKDSASAVFEAILEAKGAQRSDVYVFSGLITAYLESGFLHDALECFR--- 90

Query: 298 GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVT---------YNSILRKL 348
             T  H  +       CR   LE  ++L+   +  G Y  ++          +N ++ + 
Sbjct: 91  -LTREHKFWVPF--DTCRKV-LEHFMKLKYFKSVWGFYKEILECGYPASLYFFNILMHRF 146

Query: 349 CKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ 408
           CKEG +R A  + +E+ +  + P  V+ NTL+N Y ++GD     ++K+ M  +G+  D 
Sbjct: 147 CKEGEMRLAQSVFDEITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHGSGIQPDV 206

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
           +TY  LI+G CK  +M+ A EL   M+  G  P+  +++ L+DG+C   + +  ++   E
Sbjct: 207 YTYSVLINGLCKESKMNDANELFDEMIGNGLVPNGVTFTTLIDGHCKTGSIDLAMEAYKE 266

Query: 469 FVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
            + +G   D+  Y  LI   CK+  +  AQ L + M   G+  D + YT+L     + G+
Sbjct: 267 MLRQGFSPDLITYNTLIYGLCKEGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGD 326



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 87/310 (28%), Positives = 144/310 (46%), Gaps = 29/310 (9%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKI---ALRDFLSTPSVLNALVKIHDDPDGN 129
            Y  SL     ++H   K    + AQ++ ++I    LR     PSV++            
Sbjct: 131 GYPASLYFFNILMHRFCKEGEMRLAQSVFDEITKWGLR-----PSVVS------------ 173

Query: 130 SHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYK 189
               + L+  Y  L    +G ++   M    + P ++  +VL+N L K+   +   +++ 
Sbjct: 174 ---FNTLMNGYIRLGDLDEGFRLKSAMHGSGIQPDVYTYSVLINGLCKESKMNDANELFD 230

Query: 190 KMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKG 249
           +M+  G+V N   +  LI   CK+  +D   +   EM  +    DL TYNTLI   CK+G
Sbjct: 231 EMIGNGLVPNGVTFTTLIDGHCKTGSIDLAMEAYKEMLRQGFSPDLITYNTLIYGLCKEG 290

Query: 250 MHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA----RRLFRDIKGATPNHVT 305
              +A  + D M  +G+ PD +TY +LI G C+EG +  A    +R+ ++      + V 
Sbjct: 291 DLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFKYKKRMIKE--NIRLDDVA 348

Query: 306 YTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMN 365
           YT LI G CR      A ++   M + G+ P   TY  I+ + CK+G ++  ++LL EM 
Sbjct: 349 YTALISGLCREGQSVGAEKMLREMLSVGLKPDNGTYTMIINEFCKKGDVKMGSKLLKEMQ 408

Query: 366 EKKIAPDNVT 375
                P  VT
Sbjct: 409 RDGHVPCVVT 418



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/294 (22%), Positives = 121/294 (41%), Gaps = 17/294 (5%)

Query: 272 TYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAA 331
           +Y ++IH  C    + EA+ L + +                  +  D   A+    ++ A
Sbjct: 15  SYCTMIHFLCTHQMLPEAKNLIQIVVSR---------------KGKDSASAV-FEAILEA 58

Query: 332 KGVY-PGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTA 390
           KG     V  ++ ++    + G + DA        E K      TC  ++  + K+    
Sbjct: 59  KGAQRSDVYVFSGLITAYLESGFLHDALECFRLTREHKFWVPFDTCRKVLEHFMKLKYFK 118

Query: 391 SAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLV 450
           S       +LE G     + +  L+H FCK  EM +A+ +   +   G  PS  S++ L+
Sbjct: 119 SVWGFYKEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDEITKWGLRPSVVSFNTLM 178

Query: 451 DGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGIL 510
           +GY    + +   +L       G+  DV  Y  LI   CK+ K++ A  LF+ M GNG++
Sbjct: 179 NGYIRLGDLDEGFRLKSAMHGSGIQPDVYTYSVLINGLCKESKMNDANELFDEMIGNGLV 238

Query: 511 GDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
            + V +T+L   + + G      +   +M R+     L  Y +      K+ ++
Sbjct: 239 PNGVTFTTLIDGHCKTGSIDLAMEAYKEMLRQGFSPDLITYNTLIYGLCKEGDL 292


>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
 gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
          Length = 747

 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 154/535 (28%), Positives = 269/535 (50%), Gaps = 13/535 (2%)

Query: 22  LKGHWAKLLNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSH 81
           LK H  +L   +++++ T  A   +LL   N      L   F  WA    P+   +L+  
Sbjct: 32  LKRHPYQL--HHLSANFTPEAASNLLLKSQNN---QELILKFLTWAN---PHQFFTLRCK 83

Query: 82  WTMIHILTKNKHFKSAQNMLEKIALR--DFLSTPSVLNALVKIHDDPDGNSHVLSWLVIF 139
              +HILT+ K +K+AQ + E +A +  D      V  +L + +D  +  S V   +V  
Sbjct: 84  CITLHILTRFKLYKTAQTLAEDVAAKTLDDEDASLVFRSLQETYDLCNSTSSVFDLVVKS 143

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKD-RLTDMVWKVYKKMVQLGVVA 198
           Y+ L +    L +    + H  MP + +   +L++  +  R       V+K+M+Q  V  
Sbjct: 144 YSRLCLIDKALSIVHLSQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLQSQVSP 203

Query: 199 NIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQ 258
           N+  YN+LI   C + ++D   +    ME K    ++ TYNTLI  YCK     +   + 
Sbjct: 204 NVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELL 263

Query: 259 DRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRA 316
             M  +G+ P++++YN +I+G CREGRM+E   +  ++  +G + + VTY TLI GYC+ 
Sbjct: 264 RSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKE 323

Query: 317 NDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTC 376
            +  +AL +   M   G+ P V+TY S++  +CK G +  A   L++M  + + P+  T 
Sbjct: 324 GNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTY 383

Query: 377 NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD 436
            TL++ + + G    A +V   M++ G      TY ALI+G C A +M  A  +L  M +
Sbjct: 384 TTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKE 443

Query: 437 AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDY 496
            G +P   SYS ++ G+C   + +  L++  + V++G+  D   Y +LI+ FC++ +   
Sbjct: 444 KGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKE 503

Query: 497 AQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIY 551
           A  LF+ M   G+  D   YT+L  AY   G+ +    + ++M  + ++  +  Y
Sbjct: 504 ACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTY 558



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 119/355 (33%), Positives = 195/355 (54%), Gaps = 2/355 (0%)

Query: 149 GLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIH 208
            L+ FD+M     +P++     L++   K R  D  +++ + M   G+  N+  YNV+I+
Sbjct: 224 ALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVIN 283

Query: 209 ACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISP 268
             C+   + ++  +L EM  +    D  TYNTLI  YCK+G  ++AL +   M R G+SP
Sbjct: 284 GLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSP 343

Query: 269 DIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEALRLR 326
            ++TY SLIH  C+ G M  A        ++G  PN  TYTTL+DG+ +   + EA R+ 
Sbjct: 344 SVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVL 403

Query: 327 EVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKI 386
           + M   G  P VVTYN+++   C  G++ DA  +L +M EK + PD V+ +T+++ +C+ 
Sbjct: 404 KEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRS 463

Query: 387 GDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSY 446
            D   A++VK +M+  G+  D  TY +LI GFC+ +    A +L   ML  G  P   +Y
Sbjct: 464 YDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTY 523

Query: 447 SWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
           + L++ YC + + +  ++L +E V +G+  DV  Y  LI    K+ +   A+RL 
Sbjct: 524 TALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLL 578



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 128/459 (27%), Positives = 225/459 (49%), Gaps = 54/459 (11%)

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDR--------LTDMVWKV 187
           L+  Y  L+   DG ++   M +  L P+L +  V++N L ++         LT+M  + 
Sbjct: 246 LIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRG 305

Query: 188 YK---------------------------KMVQLGVVANIHLYNVLIHACCKSSDVDKVE 220
           Y                            +M++ G+  ++  Y  LIH+ CK+ ++++  
Sbjct: 306 YSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRAT 365

Query: 221 KLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGF 280
           + L +M  + +  +  TY TL+  + +KG   EA  V   M   G SP +VTYN+LI+G 
Sbjct: 366 EFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGH 425

Query: 281 CREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGV 338
           C  G+M +A  +  D+K  G TP+ V+Y+T++ G+CR+ D++EALR++  M AKG+ P  
Sbjct: 426 CIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDT 485

Query: 339 VTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNR 398
           +TY+S+++  C++ R ++A  L +EM    + PD  T   LINAYC  GD   A+++ N 
Sbjct: 486 ITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNE 545

Query: 399 MLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNN 458
           M+E G++ D  TY  LI+G  K      AK LL  +      PS  +Y  L++  C+   
Sbjct: 546 MVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIEN-CSNIE 604

Query: 459 EEALLKLLDEFVSRGLCV----------------DVSVYRALIRRFCKKEKVDYAQRLFN 502
            ++++ L+  F  +G+                  D + Y  +I   C+   +  A  L+ 
Sbjct: 605 FKSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYK 664

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
            M  +G L  +V   +L     + G+    + ++ ++ R
Sbjct: 665 EMVKSGFLLHTVTVIALVKTLHKEGKVNELNSVIANVLR 703



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 115/416 (27%), Positives = 188/416 (45%), Gaps = 75/416 (18%)

Query: 238 YNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGR-MREARRLFRDI 296
           ++ ++  Y +  +  +AL++    +  G  P +++YN+++    R  R +  A  +F+++
Sbjct: 137 FDLVVKSYSRLCLIDKALSIVHLSQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196

Query: 297 --KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSI------LRK- 347
                +PN  TY  LI G+C A +L+ ALR  + M  KG  P VVTYN++      LRK 
Sbjct: 197 LQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKI 256

Query: 348 ----------------------------LCKEGRIRDANRLLNEMNEKKIAPDNVTCNTL 379
                                       LC+EGR+++ + +L EMN++  + D VT NTL
Sbjct: 257 DDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTL 316

Query: 380 INAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL-------- 431
           I  YCK G+   A+ +   ML  GL     TY +LIH  CKA  M+ A E L        
Sbjct: 317 IKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGL 376

Query: 432 -------------FG--------------MLDAGFSPSYCSYSWLVDGYCNKNNEEALLK 464
                        F               M+D GFSPS  +Y+ L++G+C        + 
Sbjct: 377 CPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIA 436

Query: 465 LLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYW 524
           +L++   +GL  DV  Y  ++  FC+   VD A R+   M   GI  D++ Y+SL   + 
Sbjct: 437 VLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFC 496

Query: 525 RAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSH--VVDRGLM 578
                K   D+ D+M R  L      Y +   +Y  + ++      H  +V++G++
Sbjct: 497 EQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVL 552



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 88/341 (25%), Positives = 165/341 (48%), Gaps = 43/341 (12%)

Query: 79  QSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVL--NALVKIHDDPDGNSHVLSWL 136
           +++ T++   ++  +   A  +L+++    F  +PSV+  NAL+        N H ++  
Sbjct: 381 RTYTTLVDGFSQKGYMNEAYRVLKEMIDNGF--SPSVVTYNALI--------NGHCIAGK 430

Query: 137 VIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGV 196
           ++         D + V + M+   L P + + + +L+   +    D   +V +KMV  G+
Sbjct: 431 MV---------DAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGI 481

Query: 197 VANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALA 256
             +   Y+ LI   C+     +   L  EM    +  D FTY  LI  YC +G   +A+ 
Sbjct: 482 KPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQ 541

Query: 257 VQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYC 314
           + + M  +G+ PD+VTY+ LI+G  ++ R REA+RL   +  + + P+ VTY TLI+   
Sbjct: 542 LHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIEN-- 599

Query: 315 RANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNV 374
             +++E              +  VV   S+++  C +G + +A+++   M EK   PD  
Sbjct: 600 -CSNIE--------------FKSVV---SLIKGFCMKGMMTEADQVFESMLEKNHKPDGT 641

Query: 375 TCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALI 415
             N +I+ +C+ GD   A  +   M+++G +L   T  AL+
Sbjct: 642 AYNVMIHGHCRGGDIRKAYSLYKEMVKSGFLLHTVTVIALV 682


>gi|410109913|gb|AFV61036.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           aristata]
          Length = 431

 Score =  242 bits (617), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 129/428 (30%), Positives = 230/428 (53%), Gaps = 4/428 (0%)

Query: 62  AFFKWAES-AVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS-VLNAL 119
           +FF W  S A   ++H+L  + TMIH L  ++    A+++++ +  R    + S V  A+
Sbjct: 2   SFFTWLSSPANSTFRHTLHXYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAI 61

Query: 120 VKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDR 179
            +       + +V S L+  Y      +D ++ +   R H        C  +L  L K +
Sbjct: 62  XETXGTQRSDJYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLK 121

Query: 180 LTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYN 239
              +VW  Y+++++ G  A+++ +N+L+H  CK  D+   + +   +    +R  + +YN
Sbjct: 122 YFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYN 181

Query: 240 TLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IK 297
           TL+  Y + G   E   ++  M   G+ PD+ TY+ LI+G C+E +M +A  LF +  +K
Sbjct: 182 TLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVK 241

Query: 298 GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDA 357
           G  PN VT+TTLIDG+C+   ++ A+ + + M ++ + P ++TYN+++  LCK+G ++ A
Sbjct: 242 GLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQA 301

Query: 358 NRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHG 417
           + L++EM+ K + PD +T  TLI+  CK GD  SA + + RM++  + LD+  Y ALI G
Sbjct: 302 HHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISG 361

Query: 418 FCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVD 477
            C+      A+++L  ML  G  P   +Y+ +++ +C K +     KLL E    G    
Sbjct: 362 LCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGXKLLKEMQRDGHVPS 421

Query: 478 VSVYRALI 485
           V  Y  L+
Sbjct: 422 VVTYNVLM 429



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 92/279 (32%), Positives = 148/279 (53%), Gaps = 2/279 (0%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           G    +  +N L+H FC++G +R A+ +F  I   G  P+ V+Y TL++GY R  DL+E 
Sbjct: 137 GYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEG 196

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            RL+  M A GV P V TY+ ++  LCKE ++ DAN L +EM  K + P+ VT  TLI+ 
Sbjct: 197 FRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDG 256

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +CK G    AM++  +ML   L  D  TY  LI+G CK  ++  A  L+  M   G  P 
Sbjct: 257 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPD 316

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ L+DG C + + ++  +     +   + +D   Y ALI   C++ +   A+++  
Sbjct: 317 KITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLR 376

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
            M   G+  D+  YT +   + + G+      +L +M R
Sbjct: 377 EMLSVGLKPDARTYTMIINEFCKKGDVWKGXKLLKEMQR 415



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 89/327 (27%), Positives = 149/327 (45%), Gaps = 40/327 (12%)

Query: 232 RADLFTYNTLIALYCKKGMHYEALA-VQDRMEREGISP-----------------DIVTY 273
           R  L  Y T+I   C   M  EA + +Q  + R+G                    DJ  +
Sbjct: 16  RHTLHXYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAIXETXGTQRSDJYVF 75

Query: 274 NSLIHGFCREGRMREA---RRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMA 330
           + LI  +   G +R+A    RL R+ K   P            CR   LE  ++L+    
Sbjct: 76  SGLITAYLESGFLRDAIECYRLTREHKFWVPFDT---------CRKV-LEHLMKLKYFKL 125

Query: 331 AKGVYPGVVT---------YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
             G Y  ++          +N ++ + CK+G IR A  + + + +  + P  V+ NTL+N
Sbjct: 126 VWGFYEEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMN 185

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
            Y ++GD     ++K+ ML +G+  D +TY  LI+G CK  +MD A EL   ML  G  P
Sbjct: 186 GYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVP 245

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
           +  +++ L+DG+C     +  +++  + +S+ L  D+  Y  LI   CKK  +  A  L 
Sbjct: 246 NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLI 305

Query: 502 NLMQGNGILGDSVIYTSLAYAYWRAGE 528
           + M   G+  D + YT+L     + G+
Sbjct: 306 DEMSVKGLKPDKITYTTLIDGCCKEGD 332



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 66/287 (22%), Positives = 118/287 (41%), Gaps = 20/287 (6%)

Query: 273 YNSLIHGFCREGRMREARRLF-----RDIKGATP---------------NHVTYTTLIDG 312
           Y ++IH  C    + EA+ L      R  KG+                 +   ++ LI  
Sbjct: 22  YCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAIXETXGTQRSDJYVFSGLITA 81

Query: 313 YCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPD 372
           Y  +  L +A+    +      +    T   +L  L K    +       E+ E      
Sbjct: 82  YLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPAS 141

Query: 373 NVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLF 432
               N L++ +CK GD   A  V + + + GL     +Y  L++G+ +  ++D    L  
Sbjct: 142 LYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKS 201

Query: 433 GMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKE 492
            ML +G  P   +YS L++G C ++  +   +L DE + +GL  +   +  LI   CK  
Sbjct: 202 AMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNG 261

Query: 493 KVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
           +VD A  ++  M    +  D + Y +L Y   + G+ K    ++D+M
Sbjct: 262 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEM 308



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 64/129 (49%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
            + D+M V  L P     T L++   K+   D  ++  K+M+Q  +  +   Y  LI   
Sbjct: 303 HLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGL 362

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           C+       EK+L EM    ++ D  TY  +I  +CKKG  ++   +   M+R+G  P +
Sbjct: 363 CQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGXKLLKEMQRDGHVPSV 422

Query: 271 VTYNSLIHG 279
           VTYN L++G
Sbjct: 423 VTYNVLMNG 431


>gi|255660860|gb|ACU25599.1| pentatricopeptide repeat-containing protein [Petrea racemosa]
          Length = 418

 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 128/402 (31%), Positives = 222/402 (55%), Gaps = 3/402 (0%)

Query: 75  KHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS-VLNALVKIHDDPDGNSHVL 133
           +H+LQS+ TMIH L  ++ F  A+++++ +  R    + S V  A+++       + +V 
Sbjct: 10  RHTLQSYCTMIHFLCTHQMFLEAKSLIQTVVSRKGKDSASAVFAAILETKGTQRSDIYVF 69

Query: 134 SWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQ 193
           S L+  Y      +D ++ F   + H+       C  +L  L K +   +VW  YK++++
Sbjct: 70  SGLITAYLESGFIRDAIECFRLTKKHSFRVPFDTCRNVLEHLMKXKYFKLVWGFYKEILE 129

Query: 194 LGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYE 253
            G  A+++ +N+L+H  CK  ++   + +   +    +R  + ++NTL+  Y K G   E
Sbjct: 130 CGYPASLYFFNILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDE 189

Query: 254 ALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLID 311
              +++ M   G+ PD+ TY+ LI+G C+E RM EA  LF ++   G  PN VT+TTLID
Sbjct: 190 GFRLKNAMRASGVQPDVYTYSVLINGLCKESRMDEANGLFGEMLDNGLVPNGVTFTTLID 249

Query: 312 GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAP 371
           G+C+   L+ A+ +   M  +G  P VVTYN+++  LCK+G ++ A  LL+EM+ K + P
Sbjct: 250 GHCKNGRLDLAMDIYRQMLNQGFSPDVVTYNTLIYGLCKKGDLKQARYLLDEMSRKGLKP 309

Query: 372 DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
           D +T  TLI+  CK GD  +A +++ RM++  + LD   Y ALI G C+      A+++L
Sbjct: 310 DKITYTTLIDGSCKEGDLETAFELRERMIKESIRLDDVVYTALIFGLCQEGRAVDAEKML 369

Query: 432 FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
             ML  G  P   +Y+ +++ +C K + +   +LL E    G
Sbjct: 370 REMLRVGLKPDDETYTMIMNEFCKKGDVKKASELLREMQRNG 411



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 97/279 (34%), Positives = 151/279 (54%), Gaps = 2/279 (0%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           G    +  +N L+H FC+EG MR A+ +F  I   G  P+ V++ TL++GY +  DL+E 
Sbjct: 131 GYPASLYFFNILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEG 190

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            RL+  M A GV P V TY+ ++  LCKE R+ +AN L  EM +  + P+ VT  TLI+ 
Sbjct: 191 FRLKNAMRASGVQPDVYTYSVLINGLCKESRMDEANGLFGEMLDNGLVPNGVTFTTLIDG 250

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +CK G    AM +  +ML  G   D  TY  LI+G CK  ++  A+ LL  M   G  P 
Sbjct: 251 HCKNGRLDLAMDIYRQMLNQGFSPDVVTYNTLIYGLCKKGDLKQARYLLDEMSRKGLKPD 310

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ L+DG C + + E   +L +  +   + +D  VY ALI   C++ +   A+++  
Sbjct: 311 KITYTTLIDGSCKEGDLETAFELRERMIKESIRLDDVVYTALIFGLCQEGRAVDAEKMLR 370

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
            M   G+  D   YT +   + + G+ K  S++L +M R
Sbjct: 371 EMLRVGLKPDDETYTMIMNEFCKKGDVKKASELLREMQR 409



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 95/363 (26%), Positives = 165/363 (45%), Gaps = 34/363 (9%)

Query: 231 VRADLFTYNTLIALYCKKGMHYEALA-VQDRMEREGISP-----------------DIVT 272
           VR  L +Y T+I   C   M  EA + +Q  + R+G                    DI  
Sbjct: 9   VRHTLQSYCTMIHFLCTHQMFLEAKSLIQTVVSRKGKDSASAVFAAILETKGTQRSDIYV 68

Query: 273 YNSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAK 332
           ++ LI  +   G +R+A   FR  K  +   V + T     CR N LE  ++ +      
Sbjct: 69  FSGLITAYLESGFIRDAIECFRLTKKHS-FRVPFDT-----CR-NVLEHLMKXKYFKLVW 121

Query: 333 GVYPGVVT---------YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
           G Y  ++          +N ++ + CKEG +R A  + + + +  + P  V+ NTL+N Y
Sbjct: 122 GFYKEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMNGY 181

Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY 443
            K+GD     ++KN M  +G+  D +TY  LI+G CK   MD A  L   MLD G  P+ 
Sbjct: 182 IKLGDLDEGFRLKNAMRASGVQPDVYTYSVLINGLCKESRMDEANGLFGEMLDNGLVPNG 241

Query: 444 CSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNL 503
            +++ L+DG+C     +  + +  + +++G   DV  Y  LI   CKK  +  A+ L + 
Sbjct: 242 VTFTTLIDGHCKNGRLDLAMDIYRQMLNQGFSPDVVTYNTLIYGLCKKGDLKQARYLLDE 301

Query: 504 MQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNE 563
           M   G+  D + YT+L     + G+ +   ++ + M +  + +   +Y +      ++  
Sbjct: 302 MSRKGLKPDKITYTTLIDGSCKEGDLETAFELRERMIKESIRLDDVVYTALIFGLCQEGR 361

Query: 564 ILD 566
            +D
Sbjct: 362 AVD 364



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 92/308 (29%), Positives = 145/308 (47%), Gaps = 25/308 (8%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKI---ALRDFLSTPSVLNALVKIHDDPDGN 129
            Y  SL     ++H   K    + AQ++ + I    LR     PSV++            
Sbjct: 131 GYPASLYFFNILMHRFCKEGEMRLAQSVFDAITKWGLR-----PSVVS------------ 173

Query: 130 SHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYK 189
               + L+  Y  L    +G ++ + MR   + P ++  +VL+N L K+   D    ++ 
Sbjct: 174 ---FNTLMNGYIKLGDLDEGFRLKNAMRASGVQPDVYTYSVLINGLCKESRMDEANGLFG 230

Query: 190 KMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKG 249
           +M+  G+V N   +  LI   CK+  +D    +  +M  +    D+ TYNTLI   CKKG
Sbjct: 231 EMLDNGLVPNGVTFTTLIDGHCKNGRLDLAMDIYRQMLNQGFSPDVVTYNTLIYGLCKKG 290

Query: 250 MHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF-RDIKGATP-NHVTYT 307
              +A  + D M R+G+ PD +TY +LI G C+EG +  A  L  R IK +   + V YT
Sbjct: 291 DLKQARYLLDEMSRKGLKPDKITYTTLIDGSCKEGDLETAFELRERMIKESIRLDDVVYT 350

Query: 308 TLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEK 367
            LI G C+     +A ++   M   G+ P   TY  I+ + CK+G ++ A+ LL EM   
Sbjct: 351 ALIFGLCQEGRAVDAEKMLREMLRVGLKPDDETYTMIMNEFCKKGDVKKASELLREMQRN 410

Query: 368 KIAPDNVT 375
              P  VT
Sbjct: 411 GRVPCVVT 418



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 84/335 (25%), Positives = 151/335 (45%), Gaps = 2/335 (0%)

Query: 232 RADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARR 291
           R+D++ ++ LI  Y + G   +A+      ++        T  +++    +    +    
Sbjct: 63  RSDIYVFSGLITAYLESGFIRDAIECFRLTKKHSFRVPFDTCRNVLEHLMKXKYFKLVWG 122

Query: 292 LFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLC 349
            +++I   G   +   +  L+  +C+  ++  A  + + +   G+ P VV++N+++    
Sbjct: 123 FYKEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMNGYI 182

Query: 350 KEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQF 409
           K G + +  RL N M    + PD  T + LIN  CK      A  +   ML+ GL+ +  
Sbjct: 183 KLGDLDEGFRLKNAMRASGVQPDVYTYSVLINGLCKESRMDEANGLFGEMLDNGLVPNGV 242

Query: 410 TYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEF 469
           T+  LI G CK   +D+A ++   ML+ GFSP   +Y+ L+ G C K + +    LLDE 
Sbjct: 243 TFTTLIDGHCKNGRLDLAMDIYRQMLNQGFSPDVVTYNTLIYGLCKKGDLKQARYLLDEM 302

Query: 470 VSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEP 529
             +GL  D   Y  LI   CK+  ++ A  L   M    I  D V+YT+L +   + G  
Sbjct: 303 SRKGLKPDKITYTTLIDGSCKEGDLETAFELRERMIKESIRLDDVVYTALIFGLCQEGRA 362

Query: 530 KACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
                +L +M R  L    + Y      + K  ++
Sbjct: 363 VDAEKMLREMLRVGLKPDDETYTMIMNEFCKKGDV 397


>gi|224113637|ref|XP_002316529.1| predicted protein [Populus trichocarpa]
 gi|222859594|gb|EEE97141.1| predicted protein [Populus trichocarpa]
          Length = 678

 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 158/525 (30%), Positives = 266/525 (50%), Gaps = 12/525 (2%)

Query: 9   SDTKFIKTISAIMLKGHWAKLLNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAE 68
           SD   ++ I   + +  W   L  N+AS LT+  + +V+    N    P L   F+ W  
Sbjct: 53  SDDVVLRAICVNLKQRRW-NFLEKNLAS-LTNALVSRVVCEFRN---TPQLVLEFYNWVG 107

Query: 69  SAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDG 128
               +  HSL+   ++IH+L  ++ +  A +++  +   + LS   VL AL   +   + 
Sbjct: 108 EK-KSVLHSLEISCSVIHVLVNSRRYDDALSLMGNLMTVNGLSPLEVLEALNNSYGICES 166

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N  V   LV     +  T    +V  ++++      +HA    L+ L K       W VY
Sbjct: 167 NHAVFDALVRACTQIGATVGACEVIKKLQIEGCWVTIHAWNNFLSHLIKVNEIHRFWIVY 226

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
           K+MV  G + N++ +NV++HA CK   + +   +   +    +  ++ T+N ++   CK 
Sbjct: 227 KEMVSYGYMENVNTFNVVVHALCKDCKLQEALSVFYRILKSGIWPNVVTFNMMVDGACKM 286

Query: 249 GMHYEALAVQDRME---REGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNH 303
           G    AL +  +ME      I P+ VTYNSLI GFC+ G +  A  L  ++      PN 
Sbjct: 287 GDMDLALKLVRKMEIMSAGSIKPNSVTYNSLIDGFCKIGGITVAEELRNEMMKIDIEPNV 346

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
            TY T+I+GY RA  LEEALRL + M  +G+ P  V YNSI+  L  EG +  A+ +  +
Sbjct: 347 RTYATMIEGYSRAGCLEEALRLCDEMVERGLLPNSVVYNSIMHWLYMEGDVDGASLVFTD 406

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
           M++K+I  D  TC+ L    C+ G   +A+K  N++LE  L+ D F++  LI+  CK+  
Sbjct: 407 MSDKQIPLDKFTCSILTRGLCRNGYITTALKFLNQVLENNLIEDAFSHNILINFLCKSNN 466

Query: 424 MDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRA 483
              A++LL  M   G  P   ++  L+DG+C + N E+ +++ D+ V      ++ VY +
Sbjct: 467 FAAARQLLARMYVRGLVPDVVTFGTLIDGHCKEGNIESAVQVYDKMVKGEEKPNLLVYNS 526

Query: 484 LIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
           +I   CK   VD A+ L +++Q  G++ D++ Y +L   Y+  G+
Sbjct: 527 IINGLCKDGLVDVARSLVDVLQRMGLV-DTITYNTLINGYFNCGK 570



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 94/350 (26%), Positives = 170/350 (48%), Gaps = 7/350 (2%)

Query: 149 GLQVFDQMRVH----NLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYN 204
           G+ V +++R      ++ P++     ++   ++    +   ++  +MV+ G++ N  +YN
Sbjct: 326 GITVAEELRNEMMKIDIEPNVRTYATMIEGYSRAGCLEEALRLCDEMVERGLLPNSVVYN 385

Query: 205 VLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMERE 264
            ++H      DVD    +  +M  K +  D FT + L    C+ G    AL   +++   
Sbjct: 386 SIMHWLYMEGDVDGASLVFTDMSDKQIPLDKFTCSILTRGLCRNGYITTALKFLNQVLEN 445

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEA 322
            +  D  ++N LI+  C+      AR+L     ++G  P+ VT+ TLIDG+C+  ++E A
Sbjct: 446 NLIEDAFSHNILINFLCKSNNFAAARQLLARMYVRGLVPDVVTFGTLIDGHCKEGNIESA 505

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
           +++ + M      P ++ YNSI+  LCK+G + D  R L ++ ++    D +T NTLIN 
Sbjct: 506 VQVYDKMVKGEEKPNLLVYNSIINGLCKDGLV-DVARSLVDVLQRMGLVDTITYNTLING 564

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           Y   G    A K+   M  AG++    TY  +I   CK   +  AKEL+  M+  G  P 
Sbjct: 565 YFNCGKFDKAFKLSTLMQNAGILASSATYNTVIKFLCKFGCVQEAKELMTMMVLWGVLPD 624

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKE 492
             +Y  LV       + E +++L D  V +G+  D   Y  ++    ++E
Sbjct: 625 NITYRTLVININKNCSAEEVIELHDYMVLKGVVPDKLTYENIVSPLLQEE 674



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 93/369 (25%), Positives = 169/369 (45%), Gaps = 5/369 (1%)

Query: 198 ANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAV 257
           +N  +++ L+ AC +        +++ +++ +     +  +N  ++   K    +    V
Sbjct: 166 SNHAVFDALVRACTQIGATVGACEVIKKLQIEGCWVTIHAWNNFLSHLIKVNEIHRFWIV 225

Query: 258 QDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCR 315
              M   G   ++ T+N ++H  C++ +++EA  +F  I   G  PN VT+  ++DG C+
Sbjct: 226 YKEMVSYGYMENVNTFNVVVHALCKDCKLQEALSVFYRILKSGIWPNVVTFNMMVDGACK 285

Query: 316 ANDLEEALRL---REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPD 372
             D++ AL+L    E+M+A  + P  VTYNS++   CK G I  A  L NEM +  I P+
Sbjct: 286 MGDMDLALKLVRKMEIMSAGSIKPNSVTYNSLIDGFCKIGGITVAEELRNEMMKIDIEPN 345

Query: 373 NVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLF 432
             T  T+I  Y + G    A+++ + M+E GL+ +   Y +++H      ++D A  +  
Sbjct: 346 VRTYATMIEGYSRAGCLEEALRLCDEMVERGLLPNSVVYNSIMHWLYMEGDVDGASLVFT 405

Query: 433 GMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKE 492
            M D        + S L  G C        LK L++ +   L  D   +  LI   CK  
Sbjct: 406 DMSDKQIPLDKFTCSILTRGLCRNGYITTALKFLNQVLENNLIEDAFSHNILINFLCKSN 465

Query: 493 KVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYR 552
               A++L   M   G++ D V + +L   + + G  ++   + D M +      L +Y 
Sbjct: 466 NFAAARQLLARMYVRGLVPDVVTFGTLIDGHCKEGNIESAVQVYDKMVKGEEKPNLLVYN 525

Query: 553 SFSASYAKD 561
           S      KD
Sbjct: 526 SIINGLCKD 534



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 89/366 (24%), Positives = 178/366 (48%), Gaps = 24/366 (6%)

Query: 54  CHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTP 113
           C I  ++ A     E    + + +++++ TMI   ++    + A  + +++  R  L   
Sbjct: 322 CKIGGITVAEELRNEMMKIDIEPNVRTYATMIEGYSRAGCLEEALRLCDEMVERGLLPNS 381

Query: 114 SVLNALVK---IHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTV 170
            V N+++    +  D DG S V       + ++   Q  L  F              C++
Sbjct: 382 VVYNSIMHWLYMEGDVDGASLV-------FTDMSDKQIPLDKF-------------TCSI 421

Query: 171 LLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKD 230
           L   L ++       K   ++++  ++ +   +N+LI+  CKS++     +LL  M  + 
Sbjct: 422 LTRGLCRNGYITTALKFLNQVLENNLIEDAFSHNILINFLCKSNNFAAARQLLARMYVRG 481

Query: 231 VRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREAR 290
           +  D+ T+ TLI  +CK+G    A+ V D+M +    P+++ YNS+I+G C++G +  AR
Sbjct: 482 LVPDVVTFGTLIDGHCKEGNIESAVQVYDKMVKGEEKPNLLVYNSIINGLCKDGLVDVAR 541

Query: 291 RLFRDI-KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLC 349
            L   + +    + +TY TLI+GY      ++A +L  +M   G+     TYN++++ LC
Sbjct: 542 SLVDVLQRMGLVDTITYNTLINGYFNCGKFDKAFKLSTLMQNAGILASSATYNTVIKFLC 601

Query: 350 KEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQF 409
           K G +++A  L+  M    + PDN+T  TL+    K       +++ + M+  G++ D+ 
Sbjct: 602 KFGCVQEAKELMTMMVLWGVLPDNITYRTLVININKNCSAEEVIELHDYMVLKGVVPDKL 661

Query: 410 TYKALI 415
           TY+ ++
Sbjct: 662 TYENIV 667


>gi|410109933|gb|AFV61046.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           micromera]
          Length = 431

 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 130/428 (30%), Positives = 227/428 (53%), Gaps = 4/428 (0%)

Query: 62  AFFKWAES-AVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS-VLNAL 119
           +FF W  S A   ++H+L S+ TMIH L  ++    A+++++ +  R    + S V  A+
Sbjct: 2   SFFTWLSSPANSTFRHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASXVFAAI 61

Query: 120 VKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDR 179
           ++       + +V S L+  Y      +D ++ +   R H        C  +L  L K +
Sbjct: 62  LETKGTQRSDIYVFSGLIXAYLESGFLRDAIECYRLTREHKFXXPFDTCRKVLEHLMKLK 121

Query: 180 LTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYN 239
              +VW  YK++++ G   +++ +N+L+H  CK  D+     +   +    +R  + +YN
Sbjct: 122 YFKLVWGFYKEILECGYPXSLYFFNILMHRFCKDGDIRVAXSVFDAITKWGLRPSVVSYN 181

Query: 240 TLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IK 297
           TL+  Y + G   E   ++  M   G+ PD+ TY+ LI+G C+E +M +A  LF +  +K
Sbjct: 182 TLMNGYIRLGDLDEGFRLKSAMXASGVQPDVYTYSVLINGLCKEXKMDDANELFDEMLVK 241

Query: 298 GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDA 357
           G  PN VT+TTLIDG+C+   ++ A+ + + M ++ + P ++TYN ++  LCK+G ++ A
Sbjct: 242 GLVPNXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNXLIYGLCKKGDLKQA 301

Query: 358 NRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHG 417
           N L+ EM+ K + PD +T  TLI+  CK G+  +A + + RM+E  + LD   Y ALI G
Sbjct: 302 NDLIXEMSMKGLKPDKITYTTLIDGCCKEGNLBTAFEHRXRMIEENIRLDDVAYTALISG 361

Query: 418 FCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVD 477
            C+      A+++L  ML  G  P   +Y+ +++ +C K +     KLL E    G    
Sbjct: 362 LCQEGRXVDAEKMLRXMLSVGLKPDAXTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPS 421

Query: 478 VSVYRALI 485
           V  Y  L+
Sbjct: 422 VVTYNVLM 429



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 94/279 (33%), Positives = 149/279 (53%), Gaps = 2/279 (0%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           G    +  +N L+H FC++G +R A  +F  I   G  P+ V+Y TL++GY R  DL+E 
Sbjct: 137 GYPXSLYFFNILMHRFCKDGDIRVAXSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEG 196

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            RL+  M A GV P V TY+ ++  LCKE ++ DAN L +EM  K + P+ VT  TLI+ 
Sbjct: 197 FRLKSAMXASGVQPDVYTYSVLINGLCKEXKMDDANELFDEMLVKGLVPNXVTFTTLIDG 256

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +CK G    AM++  +ML   L+ D  TY  LI+G CK  ++  A +L+  M   G  P 
Sbjct: 257 HCKNGRVDLAMEIYKQMLSQSLLPDLITYNXLIYGLCKKGDLKQANDLIXEMSMKGLKPD 316

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ L+DG C + N +   +     +   + +D   Y ALI   C++ +   A+++  
Sbjct: 317 KITYTTLIDGCCKEGNLBTAFEHRXRMIEENIRLDDVAYTALISGLCQEGRXVDAEKMLR 376

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
            M   G+  D+  YT +   + + G+    S +L +M R
Sbjct: 377 XMLSVGLKPDAXTYTMIINEFCKKGDVWKGSKLLKEMQR 415



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 88/318 (27%), Positives = 145/318 (45%), Gaps = 40/318 (12%)

Query: 232 RADLFTYNTLIALYCKKGMHYEALA-VQDRMEREGISP-----------------DIVTY 273
           R  L +Y T+I   C   M  EA + +Q  + R+G                    DI  +
Sbjct: 16  RHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASXVFAAILETKGTQRSDIYVF 75

Query: 274 NSLIHGFCREGRMREA---RRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMA 330
           + LI  +   G +R+A    RL R+ K   P            CR   LE  ++L+    
Sbjct: 76  SGLIXAYLESGFLRDAIECYRLTREHKFXXPFDT---------CR-KVLEHLMKLKYFKL 125

Query: 331 AKGVYPGVVT---------YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
             G Y  ++          +N ++ + CK+G IR A  + + + +  + P  V+ NTL+N
Sbjct: 126 VWGFYKEILECGYPXSLYFFNILMHRFCKDGDIRVAXSVFDAITKWGLRPSVVSYNTLMN 185

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
            Y ++GD     ++K+ M  +G+  D +TY  LI+G CK  +MD A EL   ML  G  P
Sbjct: 186 GYIRLGDLDEGFRLKSAMXASGVQPDVYTYSVLINGLCKEXKMDDANELFDEMLVKGLVP 245

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
           +  +++ L+DG+C     +  +++  + +S+ L  D+  Y  LI   CKK  +  A  L 
Sbjct: 246 NXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNXLIYGLCKKGDLKQANDLI 305

Query: 502 NLMQGNGILGDSVIYTSL 519
             M   G+  D + YT+L
Sbjct: 306 XEMSMKGLKPDKITYTTL 323



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 65/139 (46%), Gaps = 3/139 (2%)

Query: 141 ANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANI 200
            +LK   D   +  +M +  L P     T L++   K+   B  ++   +M++  +  + 
Sbjct: 296 GDLKQAND---LIXEMSMKGLKPDKITYTTLIDGCCKEGNLBTAFEHRXRMIEENIRLDD 352

Query: 201 HLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDR 260
             Y  LI   C+       EK+L  M    ++ D  TY  +I  +CKKG  ++   +   
Sbjct: 353 VAYTALISGLCQEGRXVDAEKMLRXMLSVGLKPDAXTYTMIINEFCKKGDVWKGSKLLKE 412

Query: 261 MEREGISPDIVTYNSLIHG 279
           M+R+G  P +VTYN L++G
Sbjct: 413 MQRDGHVPSVVTYNVLMNG 431


>gi|297803426|ref|XP_002869597.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315433|gb|EFH45856.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 538

 Score =  241 bits (616), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 138/462 (29%), Positives = 252/462 (54%), Gaps = 9/462 (1%)

Query: 10  DTKFIKTISAIMLKGHWAKLLNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAES 69
           D  F+    + +++  W KL    ++  L S  +  VLL +        LS  FF WA++
Sbjct: 53  DLDFVNVAHSHLIQSDWDKL--NKLSDHLDSFRVKNVLLKIQKDY---LLSFEFFNWAKT 107

Query: 70  AVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS-VLNALVKIHDDPDG 128
             P   HSL++H  ++H LTKN+ FKSA+++L  + +   +  P+ V +AL+  + + D 
Sbjct: 108 RNP-ASHSLETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFDALLYSYRECDS 166

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
              V   L   +A+LK  ++    F QM+ +  +P + +C   ++SL      D+  + Y
Sbjct: 167 TPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFY 226

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
           ++M +  +  N +  N+++   C+S  +DK  +LL +ME    RA   +YNTLIA +C+K
Sbjct: 227 REMRRCKISPNTYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATHVSYNTLIAGHCEK 286

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGAT--PNHVTY 306
           G+   AL +++ M + G+ P++VT+N+LIHGFCR  +++EA ++F ++K     PN VTY
Sbjct: 287 GLLSSALKLKNMMGKNGLQPNVVTFNTLIHGFCRAVKLQEASKVFGEMKALNLPPNTVTY 346

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
            TLI+GY +  D E A R  E M   G+   ++TYN+++  LCK+ + R A + + E+++
Sbjct: 347 NTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNTLILGLCKQAKTRKAAQFVKELDK 406

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
           + + P++ T + LI   C   +     ++   M+ +G   ++ T+  LI  FCK ++ D 
Sbjct: 407 ENLVPNSSTFSALIMGQCVRRNADRGFELYKSMIRSGCHPNEQTFNILISAFCKNEDFDG 466

Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
           A ++L  M+         +   + +G  ++  ++ + +LL E
Sbjct: 467 AAQVLREMVRRSIPLDSRTVHQVCNGLNHQGKDQLVKELLQE 508



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/239 (19%), Positives = 94/239 (39%), Gaps = 37/239 (15%)

Query: 341 YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML 400
           ++S+ +      + R+A     +M +    P   +CN  +++    G    A++    M 
Sbjct: 171 FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMR 230

Query: 401 EAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEE 460
              +  + +T   ++ G+C++ ++D   ELL  M   GF  ++ S               
Sbjct: 231 RCKISPNTYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATHVS--------------- 275

Query: 461 ALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLA 520
                               Y  LI   C+K  +  A +L N+M  NG+  + V + +L 
Sbjct: 276 --------------------YNTLIAGHCEKGLLSSALKLKNMMGKNGLQPNVVTFNTLI 315

Query: 521 YAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAK--DNEILDLFWSHVVDRGL 577
           + + RA + +  S +  +M    L      Y +    Y++  D+E+   F+  +V  G+
Sbjct: 316 HGFCRAVKLQEASKVFGEMKALNLPPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGI 374


>gi|410109921|gb|AFV61040.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           filifolia]
          Length = 431

 Score =  241 bits (615), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 129/428 (30%), Positives = 232/428 (54%), Gaps = 4/428 (0%)

Query: 62  AFFKWAES-AVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS-VLNAL 119
           +FF W  S A   ++H+L S+ TMIH L  ++    A+++++ +  R    + S V  A+
Sbjct: 2   SFFTWLSSPANSTFRHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAI 61

Query: 120 VKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDR 179
           ++       + +V S L+  Y      +D ++ +   R + L      C  +L  L K +
Sbjct: 62  LETKGTQRSDIYVFSGLITGYLESGFLRDAIECYRLTRENKLCVPFDTCRKVLEHLMKLK 121

Query: 180 LTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYN 239
              +VW  Y+++++ G  A+++ +N+L+H  CK  D+   + +   +    +R  + +YN
Sbjct: 122 YFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYN 181

Query: 240 TLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IK 297
           TL+  Y + G   E   ++  M   G+ PD+ TY+ LI+G C+E +M +A +LF +  +K
Sbjct: 182 TLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKENKMDDANKLFDEMLVK 241

Query: 298 GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDA 357
              PN VT+TTLIDG+C+   ++ A+ + + M ++ + P ++TYN+++  LCK+G ++ A
Sbjct: 242 ALVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQA 301

Query: 358 NRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHG 417
           N L++EM+ K + PD +T  TLI+  CK GD  +A + + RM++  + LD   Y ALI G
Sbjct: 302 NDLIDEMSMKGLQPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISG 361

Query: 418 FCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVD 477
            C+      A+++L  ML  G  P   +Y+ +++ +C K +     KLL E    G    
Sbjct: 362 LCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPS 421

Query: 478 VSVYRALI 485
           V  Y  L+
Sbjct: 422 VVTYNVLM 429



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 93/279 (33%), Positives = 151/279 (54%), Gaps = 2/279 (0%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           G    +  +N L+H FC++G +R A+ +F  I   G  P+ V+Y TL++GY R  DL+E 
Sbjct: 137 GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEG 196

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            RL+  M A GV P V TY+ ++  LCKE ++ DAN+L +EM  K + P+ VT  TLI+ 
Sbjct: 197 FRLKSAMLASGVQPDVYTYSVLINGLCKENKMDDANKLFDEMLVKALVPNGVTFTTLIDG 256

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +CK G    AM++  +ML   L+ D  TY  LI+G CK  ++  A +L+  M   G  P 
Sbjct: 257 HCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMSMKGLQPD 316

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ L+DG C + + +   +     +   + +D   Y ALI   C++ +   A+++  
Sbjct: 317 KITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLR 376

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
            M   G+  D+  YT +   + + G+    S +L +M R
Sbjct: 377 EMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQR 415



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 89/327 (27%), Positives = 150/327 (45%), Gaps = 40/327 (12%)

Query: 232 RADLFTYNTLIALYCKKGMHYEALA-VQDRMEREGISP-----------------DIVTY 273
           R  L +Y T+I   C   M  EA + +Q  + R+G                    DI  +
Sbjct: 16  RHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVF 75

Query: 274 NSLIHGFCREGRMREA---RRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMA 330
           + LI G+   G +R+A    RL R+ K   P            CR   LE  ++L+    
Sbjct: 76  SGLITGYLESGFLRDAIECYRLTRENKLCVPFDT---------CRKV-LEHLMKLKYFKL 125

Query: 331 AKGVYPGVVT---------YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
             G Y  ++          +N ++ + CK+G IR A  + + + +  + P  V+ NTL+N
Sbjct: 126 VWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMN 185

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
            Y ++GD     ++K+ ML +G+  D +TY  LI+G CK  +MD A +L   ML     P
Sbjct: 186 GYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKENKMDDANKLFDEMLVKALVP 245

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
           +  +++ L+DG+C     +  +++  + +S+ L  D+  Y  LI   CKK  +  A  L 
Sbjct: 246 NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLI 305

Query: 502 NLMQGNGILGDSVIYTSLAYAYWRAGE 528
           + M   G+  D + YT+L     + G+
Sbjct: 306 DEMSMKGLQPDKITYTTLIDGCCKEGD 332



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 68/139 (48%), Gaps = 3/139 (2%)

Query: 141 ANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANI 200
            +LK   D   + D+M +  L P     T L++   K+   D  ++  K+M+Q  +  + 
Sbjct: 296 GDLKQAND---LIDEMSMKGLQPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDD 352

Query: 201 HLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDR 260
             Y  LI   C+       EK+L EM    ++ D  TY  +I  +CKKG  ++   +   
Sbjct: 353 VAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKE 412

Query: 261 MEREGISPDIVTYNSLIHG 279
           M+R+G  P +VTYN L++G
Sbjct: 413 MQRDGHVPSVVTYNVLMNG 431


>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At2g02150-like [Cucumis
           sativus]
          Length = 822

 Score =  241 bits (614), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 159/561 (28%), Positives = 270/561 (48%), Gaps = 22/561 (3%)

Query: 36  SSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFK 95
           S+L    + K+LL L      P L+  FFKWA S V  ++H+ +S+  ++H++ + + + 
Sbjct: 66  SALAPIWVSKILLGLR---EDPKLALKFFKWAGSQV-GFRHTTESYCIIVHLVFRARMYT 121

Query: 96  SAQNMLEKIAL--RDFLSTP--SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQ 151
            A + ++++ +  R  +  P  ++ + L    +     S V   L   +  L + ++  +
Sbjct: 122 DAHDTVKEVIMNSRMDMGFPVCNIFDMLWSTRNICVSGSGVFDVLFSVFVELGLLEEANE 181

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
            F +MR    +P   +C  LL+ L+K     +V K +  M+  G+  ++  YNV+I   C
Sbjct: 182 CFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLC 241

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           K  D++   +L  +M    +  D+ TYN+LI  Y K G   E  ++ + M+  G  PDI+
Sbjct: 242 KEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDII 301

Query: 272 TYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           TYN LI+ +C+  +M  A   F ++K  G  PN VTY+TLID +C+   ++ A++L   M
Sbjct: 302 TYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDM 361

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
              G+ P   TY S++   CK G + +A +LLN+M +  +  + VT   L++  CK G  
Sbjct: 362 RRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRM 421

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
             A +V   ML+ G+  +Q  Y AL+HG+ KA+ M+ A ++L  M +    P    Y  +
Sbjct: 422 IEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSI 481

Query: 450 VDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGI 509
           + G+C++   E    +L+E  SRG+  +  +   +I  + K  K   A   F  MQ  G+
Sbjct: 482 IWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGV 541

Query: 510 LGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFW 569
               V Y  L      AG  +   D    M    L   + +Y S       +N I     
Sbjct: 542 EATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIES--- 598

Query: 570 SHVVDRGLMSKHIFKEMQLRN 590
                    +K +F EMQ R 
Sbjct: 599 ---------AKKLFDEMQCRG 610



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 131/473 (27%), Positives = 229/473 (48%), Gaps = 23/473 (4%)

Query: 77  SLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVL--NALVKIHDDPDGNSHVLS 134
           S+ ++  MI  L K    ++++ +   + +R+   +P V+  N+L+      DG      
Sbjct: 229 SVFTYNVMIDYLCKEGDLENSRRLF--VQMREMGLSPDVVTYNSLI------DG------ 274

Query: 135 WLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQL 194
                Y  +   ++   +F++M+    +P +     L+N   K       ++ + +M   
Sbjct: 275 -----YGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNN 329

Query: 195 GVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEA 254
           G+  N+  Y+ LI A CK   +    KLL +M    +  + FTY +LI   CK G   EA
Sbjct: 330 GLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEA 389

Query: 255 LAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDG 312
             + + M + G+  +IVTY +L+ G C+ GRM EA  +FR +   G +PN   YT L+ G
Sbjct: 390 WKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHG 449

Query: 313 YCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPD 372
           Y +A  +E+A+++ + M    + P ++ Y SI+   C + ++ +   +L EM  + I+ +
Sbjct: 450 YIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISAN 509

Query: 373 NVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLF 432
            V   T+I+AY K G ++ A+     M + G+     TY  LI G C+A  +++A +   
Sbjct: 510 PVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFC 569

Query: 433 GMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKE 492
            ML  G  P+   Y+ L+DG C  N  E+  KL DE   RG+  D++ + ALI    K  
Sbjct: 570 RMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHG 629

Query: 493 KVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
            +  A  L + M    I  D  +YTSL   + + GE        ++M  + ++
Sbjct: 630 NLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGIL 682



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 114/430 (26%), Positives = 206/430 (47%), Gaps = 4/430 (0%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           S+ N +  +   PD  ++  + L+  Y   +      + F +M+ + L P++   + L++
Sbjct: 286 SLFNEMKDVGCVPDIITY--NGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLID 343

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
           +  K+ +     K+   M + G++ N   Y  LI A CK+ ++ +  KLL +M    V+ 
Sbjct: 344 AFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKL 403

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           ++ TY  L+   CK G   EA  V   M ++GISP+   Y +L+HG+ +  RM +A ++ 
Sbjct: 404 NIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKIL 463

Query: 294 RDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
           + +      P+ + Y ++I G+C    LEE   + E M ++G+    V   +I+    K 
Sbjct: 464 KQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKA 523

Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
           G+  DA     EM +  +    VT   LI+  C+ G    A+    RML  GL  +   Y
Sbjct: 524 GKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVY 583

Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
            +LI G C    ++ AK+L   M   G +P   +++ L+DG     N +  L L+     
Sbjct: 584 TSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTE 643

Query: 472 RGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKA 531
             +  D+ VY +L+  F +  ++  A++ FN M   GIL + V+   L   Y++ G+   
Sbjct: 644 LAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDE 703

Query: 532 CSDILDDMYR 541
             ++ ++M R
Sbjct: 704 AIELKNEMER 713



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 98/202 (48%), Gaps = 5/202 (2%)

Query: 146 TQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNV 205
           + D L  F +M+   +   +    VL++ L +  + ++    + +M+ LG+  N+ +Y  
Sbjct: 526 SSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTS 585

Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
           LI   C ++ ++  +KL  EM+ + +  D+  +  LI    K G   EAL +  RM    
Sbjct: 586 LIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELA 645

Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEAL 323
           I  D+  Y SL+ GF + G + +AR+ F ++  KG  P  V    L+  Y +   L+EA+
Sbjct: 646 IEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAI 705

Query: 324 RLR---EVMAAKGVYPGVVTYN 342
            L+   E MA    +   + YN
Sbjct: 706 ELKNEMERMAYSFEFDAQLAYN 727


>gi|410109903|gb|AFV61031.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           montevidensis]
          Length = 431

 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 128/428 (29%), Positives = 230/428 (53%), Gaps = 4/428 (0%)

Query: 62  AFFKWAES-AVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS-VLNAL 119
           +FF W  S A   ++H+L S+ TMIH L  ++    A+++++ +  R    + S V  A+
Sbjct: 2   SFFTWLSSPANSTFRHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAI 61

Query: 120 VKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDR 179
            +       + +V S L+  Y      +D ++ +   R H        C  +L  L K +
Sbjct: 62  FETKGTQRSDLYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLK 121

Query: 180 LTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYN 239
              +VW  Y+++++ G  A+++ +N+L+H  CK  D+   + +   +    +R  + +YN
Sbjct: 122 YFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYN 181

Query: 240 TLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IK 297
           TL+  Y + G   E   ++  M   G+ PD+ TY+ LI+G C+E ++ +A  LF +  +K
Sbjct: 182 TLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVK 241

Query: 298 GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDA 357
           G  PN VT+TTLIDG+C+   ++ A+ + + M ++ + P ++TYN+++  LCK+G ++ A
Sbjct: 242 GLVPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQA 301

Query: 358 NRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHG 417
           + L++EM+ K + PD +T  TLI+  CK GD  +A + + RM++    LD   Y ALI G
Sbjct: 302 HHLIDEMSMKGLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISG 361

Query: 418 FCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVD 477
            C+  +   A+++L  ML  G  P   +Y+ +++ +C K +     KLL E    G    
Sbjct: 362 LCREGQSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPS 421

Query: 478 VSVYRALI 485
           V  Y  L+
Sbjct: 422 VVTYNVLM 429



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 95/279 (34%), Positives = 148/279 (53%), Gaps = 2/279 (0%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           G    +  +N L+H FC++G +R A+ +F  I   G  P+ V+Y TL++GY R  DL+E 
Sbjct: 137 GYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEG 196

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            RL+  M A GV P V TY+ ++  LCKE +I DAN L +EM  K + P++VT  TLI+ 
Sbjct: 197 FRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDG 256

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +CK G    AM++  +ML   L  D  TY  LI+G CK  ++  A  L+  M   G  P 
Sbjct: 257 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPD 316

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ L+DG C   + +   +     +     +D  VY ALI   C++ +   A+++  
Sbjct: 317 KITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGQSVDAEKMLR 376

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
            M   G+  D+  YT +   + + G+    S +L +M R
Sbjct: 377 EMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQR 415



 Score =  125 bits (313), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 87/318 (27%), Positives = 147/318 (46%), Gaps = 40/318 (12%)

Query: 232 RADLFTYNTLIALYCKKGMHYEALA-VQDRMEREGISP-----------------DIVTY 273
           R  L +Y T+I   C   M  EA + +Q  + R+G                    D+  +
Sbjct: 16  RHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAIFETKGTQRSDLYVF 75

Query: 274 NSLIHGFCREGRMREA---RRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMA 330
           + LI  +   G +R+A    RL R+ K   P            CR   LE  ++L+    
Sbjct: 76  SGLITAYLESGFLRDAIECYRLTREHKFWVPFDT---------CRKV-LEHLMKLKYFKL 125

Query: 331 AKGVYPGVVT---------YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
             G Y  ++          +N ++ + CK+G IR A  + + + +  + P  V+ NTL+N
Sbjct: 126 VWGFYEEILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMN 185

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
            Y ++GD     ++K+ ML +G+  D +TY  LI+G CK  ++D A EL   ML  G  P
Sbjct: 186 GYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVP 245

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
           +  +++ L+DG+C     +  +++  + +S+ L  D+  Y  LI   CKK  +  A  L 
Sbjct: 246 NSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLI 305

Query: 502 NLMQGNGILGDSVIYTSL 519
           + M   G+  D + YT+L
Sbjct: 306 DEMSMKGLKPDKITYTTL 323



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 64/129 (49%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
            + D+M +  L P     T L++   KD   D  ++  K+M+Q     +  +Y  LI   
Sbjct: 303 HLIDEMSMKGLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGL 362

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           C+       EK+L EM    ++ D  TY  +I  +CKKG  ++   +   M+R+G  P +
Sbjct: 363 CREGQSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSV 422

Query: 271 VTYNSLIHG 279
           VTYN L++G
Sbjct: 423 VTYNVLMNG 431


>gi|255660844|gb|ACU25591.1| pentatricopeptide repeat-containing protein [Rhaphithamnus
           venustus]
          Length = 418

 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 122/404 (30%), Positives = 223/404 (55%), Gaps = 3/404 (0%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS-VLNALVKIHDDPDGNSH 131
            ++H+L S+ TMIH L  ++    A+++++ +  R    + S V  A+++       + +
Sbjct: 8   TFRHTLHSYCTMIHFLCTHQMLLEAKSLIQIVVSRKGKDSASAVFAAILETKGTQRSDIY 67

Query: 132 VLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKM 191
           V S L+  Y      +D ++ F   R H        C  +L  L K +   +VW  YK++
Sbjct: 68  VFSGLITAYLESGFIRDAIEFFRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYKEI 127

Query: 192 VQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMH 251
           ++ G  A+++ +N+L+H  CK  ++   + +   +    +R  + ++NTL++ Y + G  
Sbjct: 128 LECGYPASLYFFNILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMSGYIRLGDL 187

Query: 252 YEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTL 309
            E   ++  M   G+ PD+ TY+ LI+G C+E +M EA  LF ++   G  PN VT+TTL
Sbjct: 188 DEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEANELFNEMLDNGLVPNGVTFTTL 247

Query: 310 IDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI 369
           IDG+C+   ++ A+ + + + ++G  P ++TYN+++  LCK+G ++ A  L++EM+ K++
Sbjct: 248 IDGHCKNGRVDLAMEIYKQLLSQGFSPDLITYNTLIFGLCKKGDLKQARDLIDEMSMKEL 307

Query: 370 APDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKE 429
            PD +T  TLI+  CK GD  +A + + RM++  + LD   Y ALI G C+      A++
Sbjct: 308 KPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEK 367

Query: 430 LLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
           +L GML  G  P   +Y+ +++ +C K + +   KLL E    G
Sbjct: 368 MLRGMLSVGLKPDNGTYTMIINEFCKKGDVKTGSKLLKEMXRDG 411



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 93/279 (33%), Positives = 148/279 (53%), Gaps = 2/279 (0%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           G    +  +N L+H FC+EG MR A+ +F  I   G  P+ V++ TL+ GY R  DL+E 
Sbjct: 131 GYPASLYFFNILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMSGYIRLGDLDEG 190

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            RL+  M A GV P V TY+ ++  LCKE ++ +AN L NEM +  + P+ VT  TLI+ 
Sbjct: 191 FRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEANELFNEMLDNGLVPNGVTFTTLIDG 250

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +CK G    AM++  ++L  G   D  TY  LI G CK  ++  A++L+  M      P 
Sbjct: 251 HCKNGRVDLAMEIYKQLLSQGFSPDLITYNTLIFGLCKKGDLKQARDLIDEMSMKELKPD 310

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ L+DG C + + E   +     +   + +D   Y ALI   C++ +   A+++  
Sbjct: 311 KITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLR 370

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
            M   G+  D+  YT +   + + G+ K  S +L +M R
Sbjct: 371 GMLSVGLKPDNGTYTMIINEFCKKGDVKTGSKLLKEMXR 409



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 90/341 (26%), Positives = 157/341 (46%), Gaps = 39/341 (11%)

Query: 232 RADLFTYNTLIALYCKKGMHYEALA-VQDRMEREGISP-----------------DIVTY 273
           R  L +Y T+I   C   M  EA + +Q  + R+G                    DI  +
Sbjct: 10  RHTLHSYCTMIHFLCTHQMLLEAKSLIQIVVSRKGKDSASAVFAAILETKGTQRSDIYVF 69

Query: 274 NSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKG 333
           + LI  +   G +R+A   FR     T  H  +       CR   LE  ++L+      G
Sbjct: 70  SGLITAYLESGFIRDAIEFFR----LTREHKFWVPF--DTCRKV-LEHLMKLKYFKLVWG 122

Query: 334 VYPGVVT---------YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
            Y  ++          +N ++ + CKEG +R A  + + + +  + P  V+ NTL++ Y 
Sbjct: 123 FYKEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMSGYI 182

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           ++GD     ++K+ M  +G+  D +TY  LI+G CK  +MD A EL   MLD G  P+  
Sbjct: 183 RLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEANELFNEMLDNGLVPNGV 242

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
           +++ L+DG+C     +  +++  + +S+G   D+  Y  LI   CKK  +  A+ L + M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQLLSQGFSPDLITYNTLIFGLCKKGDLKQARDLIDEM 302

Query: 505 QGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
               +  D + YT+L     + G+ +   +     YR+R++
Sbjct: 303 SMKELKPDKITYTTLIDGSCKEGDLETAFE-----YRKRMI 338



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 79/266 (29%), Positives = 131/266 (49%), Gaps = 8/266 (3%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           SV +A+ K    P   S   + L+  Y  L    +G ++   M    + P ++  +VL+N
Sbjct: 157 SVFDAITKWGLRPSVVS--FNTLMSGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLIN 214

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
            L K+   D   +++ +M+  G+V N   +  LI   CK+  VD   ++  ++  +    
Sbjct: 215 GLCKESKMDEANELFNEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQLLSQGFSP 274

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA---- 289
           DL TYNTLI   CKKG   +A  + D M  + + PD +TY +LI G C+EG +  A    
Sbjct: 275 DLITYNTLIFGLCKKGDLKQARDLIDEMSMKELKPDKITYTTLIDGSCKEGDLETAFEYR 334

Query: 290 RRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLC 349
           +R+ ++      + V YT LI G C+     +A ++   M + G+ P   TY  I+ + C
Sbjct: 335 KRMIKE--NIRLDDVAYTALISGLCQEGRSVDAEKMLRGMLSVGLKPDNGTYTMIINEFC 392

Query: 350 KEGRIRDANRLLNEMNEKKIAPDNVT 375
           K+G ++  ++LL EM      P  VT
Sbjct: 393 KKGDVKTGSKLLKEMXRDGHVPCVVT 418


>gi|410109883|gb|AFV61021.1| pentatricopeptide repeat-containing protein 11, partial
           [Burroughsia fastigiata]
          Length = 431

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 128/428 (29%), Positives = 228/428 (53%), Gaps = 4/428 (0%)

Query: 62  AFFKWAES-AVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS-VLNAL 119
           +FF W  S A   ++H+L S+ TMIH +  ++ F  A+++++ +  R    + S V  A+
Sbjct: 2   SFFTWLSSPANSTFRHTLXSYCTMIHFVCTHQMFSEAKSLIQVVVSRKGKGSASAVFAAI 61

Query: 120 VKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDR 179
           ++   +   + +V S L+  Y      +D ++ +   R H        C  +L  L K +
Sbjct: 62  LETKGNQRSDIYVFSGLITAYLESGFLRDAVECYRLTREHKFWLPFDTCRKVLEHLMKLK 121

Query: 180 LTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYN 239
              +VW  Y++ ++ G  A+++ +N+L H  CK  D+   + +   +    +R  + +YN
Sbjct: 122 YFKLVWGFYEEFLECGYPASLYFFNILXHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYN 181

Query: 240 TLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IK 297
           TL+  Y + G   E   ++  M   G+ PD+ TY+ LI+G C+E +M  A  LF +  +K
Sbjct: 182 TLMNGYIRLGDLDEGFKLKSAMHASGVXPDVYTYSVLINGLCKESKMDXANELFDEMLVK 241

Query: 298 GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDA 357
           G  PN VT+TTLIDG+C+   ++ A+ + + M ++ + P ++TYN+++  LCK+G +  A
Sbjct: 242 GLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQA 301

Query: 358 NRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHG 417
           + L++EM+ K + PD +T  TLI+  CK GD  +A + + RM++  + LD   Y ALI G
Sbjct: 302 HDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISG 361

Query: 418 FCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVD 477
            C+      A++++  ML  G  P   +Y+ +++  C K +     KLL E    G    
Sbjct: 362 LCQEGRSVDAEKMMREMLSVGLKPDTGTYTMIINEVCKKGDVGKGSKLLKEMQXDGHAPS 421

Query: 478 VSVYRALI 485
           V  Y  L+
Sbjct: 422 VVTYNVLM 429



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 91/277 (32%), Positives = 147/277 (53%), Gaps = 2/277 (0%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           G    +  +N L H FC+EG +R A+ +F  I   G  P+ V+Y TL++GY R  DL+E 
Sbjct: 137 GYPASLYFFNILXHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEG 196

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            +L+  M A GV P V TY+ ++  LCKE ++  AN L +EM  K + P+ VT  TLI+ 
Sbjct: 197 FKLKSAMHASGVXPDVYTYSVLINGLCKESKMDXANELFDEMLVKGLVPNGVTFTTLIDG 256

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +CK G    AM++  +ML   L+ D  TY  LI+G CK  +++ A +L+  M   G  P 
Sbjct: 257 HCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHDLIDEMSMKGLKPD 316

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ L+DG C + + +   +     +   + +D   Y ALI   C++ +   A+++  
Sbjct: 317 KITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMMR 376

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
            M   G+  D+  YT +     + G+    S +L +M
Sbjct: 377 EMLSVGLKPDTGTYTMIINEVCKKGDVGKGSKLLKEM 413



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 91/324 (28%), Positives = 149/324 (45%), Gaps = 34/324 (10%)

Query: 232 RADLFTYNTLIALYCKKGMHYEALA-VQDRMEREGISP-----------------DIVTY 273
           R  L +Y T+I   C   M  EA + +Q  + R+G                    DI  +
Sbjct: 16  RHTLXSYCTMIHFVCTHQMFSEAKSLIQVVVSRKGKGSASAVFAAILETKGNQRSDIYVF 75

Query: 274 NSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKG 333
           + LI  +   G +R+A   +R     T  H  +       CR   LE  ++L+      G
Sbjct: 76  SGLITAYLESGFLRDAVECYR----LTREHKFWLPF--DTCR-KVLEHLMKLKYFKLVWG 128

Query: 334 VY--------PGVVTYNSIL-RKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
            Y        P  + + +IL  + CKEG IR A  + + + +  + P  V+ NTL+N Y 
Sbjct: 129 FYEEFLECGYPASLYFFNILXHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 188

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           ++GD     K+K+ M  +G+  D +TY  LI+G CK  +MD A EL   ML  G  P+  
Sbjct: 189 RLGDLDEGFKLKSAMHASGVXPDVYTYSVLINGLCKESKMDXANELFDEMLVKGLVPNGV 248

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
           +++ L+DG+C     +  +++  + +S+ L  D+  Y  LI   CKK  ++ A  L + M
Sbjct: 249 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHDLIDEM 308

Query: 505 QGNGILGDSVIYTSLAYAYWRAGE 528
              G+  D + YT+L     + G+
Sbjct: 309 SMKGLKPDKITYTTLIDGCCKEGD 332



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 62/128 (48%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           + D+M +  L P     T L++   K+   D  ++  K+M+Q  +  +   Y  LI   C
Sbjct: 304 LIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLC 363

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           +       EK++ EM    ++ D  TY  +I   CKKG   +   +   M+ +G +P +V
Sbjct: 364 QEGRSVDAEKMMREMLSVGLKPDTGTYTMIINEVCKKGDVGKGSKLLKEMQXDGHAPSVV 423

Query: 272 TYNSLIHG 279
           TYN L++G
Sbjct: 424 TYNVLMNG 431


>gi|410109955|gb|AFV61057.1| pentatricopeptide repeat-containing protein 11, partial [Phyla
           nodiflora]
          Length = 431

 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 129/428 (30%), Positives = 230/428 (53%), Gaps = 4/428 (0%)

Query: 62  AFFKWAES-AVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS-VLNAL 119
           +FF W  S A   ++H+L S+  MIH L  ++ F  A+++++ +  R    + S V  A+
Sbjct: 2   SFFTWLSSPANSTFRHTLHSYCAMIHFLCSHQMFSEAKSLIQVVVSRKGKGSASAVFAAI 61

Query: 120 VKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDR 179
           ++       + +V S L+  Y  L   +D +  +   R H        C  +L  L K +
Sbjct: 62  LETKGTQRSDIYVFSGLITAYLELGFLRDAIDCYRLTREHKFCVPFDTCRKVLEHLMKLK 121

Query: 180 LTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYN 239
              +VW  Y+++++ G  A+++ +N+L+H  CK  D+   + +   +    +R  + +YN
Sbjct: 122 YFKLVWGFYEEILECGYPASLYFFNILMHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYN 181

Query: 240 TLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--K 297
           TL+  Y + G   E   ++  M   G+ PD+ TY+ LI+G C+E +M +A +LF ++  K
Sbjct: 182 TLMNGYIRLGDLDEGFRLKSAMHASGVHPDVYTYSVLINGLCKESKMDDANKLFDEMLEK 241

Query: 298 GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDA 357
           G  PN VT+TTLIDG+C+   ++ A+ + + M ++ + P +VTYN+++  LCK+G ++ A
Sbjct: 242 GLVPNSVTFTTLIDGHCKNGWVDLAMEIYKQMLSQSLLPDLVTYNALIYGLCKKGDLKQA 301

Query: 358 NRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHG 417
           + L++EM+   + PD +T  TLI+  CK GD  +A + +  M++  + LD   Y ALI G
Sbjct: 302 HDLIDEMSMXGLKPDKITYTTLIDGCCKEGDLDTAFEHRKMMIQENIRLDDVAYTALISG 361

Query: 418 FCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVD 477
            C+      A+++L  ML  G  P   +Y+ +++ +C K +     KLL E    G    
Sbjct: 362 LCQEGRSVDAEKMLREMLSVGLKPDTRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPS 421

Query: 478 VSVYRALI 485
           V  Y  L+
Sbjct: 422 VVTYNVLM 429



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 96/279 (34%), Positives = 155/279 (55%), Gaps = 2/279 (0%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           G    +  +N L+H FC+EG +R A+ +F  I   G  P+ V+Y TL++GY R  DL+E 
Sbjct: 137 GYPASLYFFNILMHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEG 196

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            RL+  M A GV+P V TY+ ++  LCKE ++ DAN+L +EM EK + P++VT  TLI+ 
Sbjct: 197 FRLKSAMHASGVHPDVYTYSVLINGLCKESKMDDANKLFDEMLEKGLVPNSVTFTTLIDG 256

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +CK G    AM++  +ML   L+ D  TY ALI+G CK  ++  A +L+  M   G  P 
Sbjct: 257 HCKNGWVDLAMEIYKQMLSQSLLPDLVTYNALIYGLCKKGDLKQAHDLIDEMSMXGLKPD 316

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ L+DG C + + +   +     +   + +D   Y ALI   C++ +   A+++  
Sbjct: 317 KITYTTLIDGCCKEGDLDTAFEHRKMMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLR 376

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
            M   G+  D+  YT +   + + G+    S +L +M R
Sbjct: 377 EMLSVGLKPDTRTYTMIINEFCKKGDVWKGSKLLKEMQR 415



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 3/139 (2%)

Query: 141 ANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANI 200
            +LK   D   + D+M +  L P     T L++   K+   D  ++  K M+Q  +  + 
Sbjct: 296 GDLKQAHD---LIDEMSMXGLKPDKITYTTLIDGCCKEGDLDTAFEHRKMMIQENIRLDD 352

Query: 201 HLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDR 260
             Y  LI   C+       EK+L EM    ++ D  TY  +I  +CKKG  ++   +   
Sbjct: 353 VAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTRTYTMIINEFCKKGDVWKGSKLLKE 412

Query: 261 MEREGISPDIVTYNSLIHG 279
           M+R+G  P +VTYN L++G
Sbjct: 413 MQRDGHVPSVVTYNVLMNG 431


>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
 gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
 gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 747

 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 155/535 (28%), Positives = 267/535 (49%), Gaps = 13/535 (2%)

Query: 22  LKGHWAKLLNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSH 81
           LK H  +L   +++++ T  A   +LL   N     +L   F  WA    P+   +L+  
Sbjct: 32  LKRHPYQL--HHLSANFTPEAASNLLLKSQN---DQALILKFLNWAN---PHQFFTLRCK 83

Query: 82  WTMIHILTKNKHFKSAQNMLEKIALR--DFLSTPSVLNALVKIHDDPDGNSHVLSWLVIF 139
              +HILTK K +K+AQ + E +A +  D      V  +L + +D     S V   +V  
Sbjct: 84  CITLHILTKFKLYKTAQILAEDVAAKTLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKS 143

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKD-RLTDMVWKVYKKMVQLGVVA 198
           Y+ L +    L +    + H  MP + +   +L++  +  R       V+K+M++  V  
Sbjct: 144 YSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSP 203

Query: 199 NIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQ 258
           N+  YN+LI   C + ++D    L  +ME K    ++ TYNTLI  YCK     +   + 
Sbjct: 204 NVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLL 263

Query: 259 DRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRA 316
             M  +G+ P++++YN +I+G CREGRM+E   +  ++  +G + + VTY TLI GYC+ 
Sbjct: 264 RSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKE 323

Query: 317 NDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTC 376
            +  +AL +   M   G+ P V+TY S++  +CK G +  A   L++M  + + P+  T 
Sbjct: 324 GNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTY 383

Query: 377 NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD 436
            TL++ + + G    A +V   M + G      TY ALI+G C   +M+ A  +L  M +
Sbjct: 384 TTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKE 443

Query: 437 AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDY 496
            G SP   SYS ++ G+C   + +  L++  E V +G+  D   Y +LI+ FC++ +   
Sbjct: 444 KGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKE 503

Query: 497 AQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIY 551
           A  L+  M   G+  D   YT+L  AY   G+ +    + ++M  + ++  +  Y
Sbjct: 504 ACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTY 558



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 123/355 (34%), Positives = 195/355 (54%), Gaps = 2/355 (0%)

Query: 149 GLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIH 208
            L +FD+M     +P++     L++   K R  D  +K+ + M   G+  N+  YNV+I+
Sbjct: 224 ALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVIN 283

Query: 209 ACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISP 268
             C+   + +V  +L EM  +    D  TYNTLI  YCK+G  ++AL +   M R G++P
Sbjct: 284 GLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTP 343

Query: 269 DIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEALRLR 326
            ++TY SLIH  C+ G M  A        ++G  PN  TYTTL+DG+ +   + EA R+ 
Sbjct: 344 SVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVL 403

Query: 327 EVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKI 386
             M   G  P VVTYN+++   C  G++ DA  +L +M EK ++PD V+ +T+++ +C+ 
Sbjct: 404 REMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRS 463

Query: 387 GDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSY 446
            D   A++VK  M+E G+  D  TY +LI GFC+ +    A +L   ML  G  P   +Y
Sbjct: 464 YDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTY 523

Query: 447 SWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
           + L++ YC + + E  L+L +E V +G+  DV  Y  LI    K+ +   A+RL 
Sbjct: 524 TALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLL 578



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 139/513 (27%), Positives = 240/513 (46%), Gaps = 72/513 (14%)

Query: 74  YKHSLQSHWTMIHILTKN---KHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNS 130
           +K  L+S  +  ++ T N   + F  A N+   + L D + T   L  +V  +   DG  
Sbjct: 193 FKEMLESQVSP-NVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDG-- 249

Query: 131 HVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDR--------LTD 182
                    Y  L+   DG ++   M +  L P+L +  V++N L ++         LT+
Sbjct: 250 ---------YCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTE 300

Query: 183 MVWKVYK---------------------------KMVQLGVVANIHLYNVLIHACCKSSD 215
           M  + Y                            +M++ G+  ++  Y  LIH+ CK+ +
Sbjct: 301 MNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGN 360

Query: 216 VDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNS 275
           +++  + L +M  + +  +  TY TL+  + +KG   EA  V   M   G SP +VTYN+
Sbjct: 361 MNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNA 420

Query: 276 LIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKG 333
           LI+G C  G+M +A  +  D+K  G +P+ V+Y+T++ G+CR+ D++EALR++  M  KG
Sbjct: 421 LINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKG 480

Query: 334 VYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAM 393
           + P  +TY+S+++  C++ R ++A  L  EM    + PD  T   LINAYC  GD   A+
Sbjct: 481 IKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKAL 540

Query: 394 KVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGY 453
           ++ N M+E G++ D  TY  LI+G  K      AK LL  +      PS  +Y  L++  
Sbjct: 541 QLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENC 600

Query: 454 CNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDS 513
            N                    ++     +LI+ FC K  +  A ++F  M G     D 
Sbjct: 601 SN--------------------IEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDG 640

Query: 514 VIYTSLAYAYWRAGEPKACSDILDDMYRRRLMI 546
             Y  + + + RAG+ +    +  +M +   ++
Sbjct: 641 TAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLL 673



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 125/442 (28%), Positives = 214/442 (48%), Gaps = 43/442 (9%)

Query: 178 DRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFT 237
           D    +V+K  ++   L   +   ++++++ +  + S +DK   ++   +       + +
Sbjct: 113 DEYASLVFKSLQETYDL-CYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLS 171

Query: 238 YNTLI--ALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF-- 293
           YN ++   +  K+ + +     ++ +E + +SP++ TYN LI GFC  G +  A  LF  
Sbjct: 172 YNAVLDATIRSKRNISFAENVFKEMLESQ-VSPNVFTYNILIRGFCFAGNIDVALTLFDK 230

Query: 294 RDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGR 353
            + KG  PN VTY TLIDGYC+   +++  +L   MA KG+ P +++YN ++  LC+EGR
Sbjct: 231 METKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGR 290

Query: 354 IRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKA 413
           +++ + +L EMN +  + D VT NTLI  YCK G+   A+ +   ML  GL     TY +
Sbjct: 291 MKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTS 350

Query: 414 LIHGFCKAKEMDIAKELLFGML-----------------------------------DAG 438
           LIH  CKA  M+ A E L  M                                    D G
Sbjct: 351 LIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNG 410

Query: 439 FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQ 498
           FSPS  +Y+ L++G+C     E  + +L++   +GL  DV  Y  ++  FC+   VD A 
Sbjct: 411 FSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEAL 470

Query: 499 RLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASY 558
           R+   M   GI  D++ Y+SL   +      K   D+ ++M R  L      Y +   +Y
Sbjct: 471 RVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAY 530

Query: 559 AKDNEILDLFWSH--VVDRGLM 578
             + ++      H  +V++G++
Sbjct: 531 CMEGDLEKALQLHNEMVEKGVL 552



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 102/386 (26%), Positives = 174/386 (45%), Gaps = 38/386 (9%)

Query: 79  QSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVL--NALVKIHDDPDGNSHVLSWL 136
           +++ T++   ++  +   A  +L ++    F  +PSV+  NAL+        N H ++  
Sbjct: 381 RTYTTLVDGFSQKGYMNEAYRVLREMNDNGF--SPSVVTYNALI--------NGHCVTG- 429

Query: 137 VIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGV 196
                  KM +D + V + M+   L P + + + +L+   +    D   +V ++MV+ G+
Sbjct: 430 -------KM-EDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGI 481

Query: 197 VANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALA 256
             +   Y+ LI   C+     +   L  EM    +  D FTY  LI  YC +G   +AL 
Sbjct: 482 KPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQ 541

Query: 257 VQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLID--- 311
           + + M  +G+ PD+VTY+ LI+G  ++ R REA+RL   +  + + P+ VTY TLI+   
Sbjct: 542 LHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCS 601

Query: 312 ------------GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
                       G+C    + EA ++ E M  K   P    YN ++   C+ G IR A  
Sbjct: 602 NIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYT 661

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
           L  EM +       VT   L+ A  K G       V   +L +  + +    K L+    
Sbjct: 662 LYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINH 721

Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCS 445
           +   MD+  ++L  M   GF P+  S
Sbjct: 722 REGNMDVVLDVLAEMAKDGFLPNGIS 747


>gi|410109941|gb|AFV61050.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           rhodocnemis]
          Length = 428

 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 129/426 (30%), Positives = 229/426 (53%), Gaps = 4/426 (0%)

Query: 64  FKWAES-AVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS-VLNALVK 121
           F W  S A   ++H+L S+ TMIH L  ++    A+++++ +  R    + S V  A+++
Sbjct: 1   FTWLSSPANSTFRHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAILE 60

Query: 122 IHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLT 181
                  + +V S L+  Y      +D ++ +   R H L      C  +L  L K +  
Sbjct: 61  TKGTQRSDIYVFSGLITAYLETGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYF 120

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
            +VW  Y+++++ G  A+++ +N+L+H  CK  D+   + +   +    +R  + +YNTL
Sbjct: 121 KLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTL 180

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGA 299
           +  Y + G   E   ++  M   G+ PD+ TY+ LI+G C+E +M +A  LF +  +KG 
Sbjct: 181 MNGYIRLGHLDEGFRLKSAMLASGVLPDVYTYSVLINGLCKESKMDDANELFDEMLVKGL 240

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
            PN VT+TTLIDG+C+   ++ A+ + + M ++ + P ++TYN+++  LCK+G ++ A+ 
Sbjct: 241 IPNGVTFTTLIDGHCKNGRVDFAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHD 300

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
           L++EM+ K + PD  T  TLI+  CK GD  +A + + RM++  + LD   Y ALI G C
Sbjct: 301 LIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYAALISGLC 360

Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
           +      A+++L  ML  G  P   +Y+ +++ +C K +     KLL E    G    V 
Sbjct: 361 QEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAPSVV 420

Query: 480 VYRALI 485
            Y  L+
Sbjct: 421 TYNVLM 426



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 93/279 (33%), Positives = 149/279 (53%), Gaps = 2/279 (0%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           G    +  +N L+H FC++G +R A+ +F  I   G  P+ V+Y TL++GY R   L+E 
Sbjct: 134 GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGHLDEG 193

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            RL+  M A GV P V TY+ ++  LCKE ++ DAN L +EM  K + P+ VT  TLI+ 
Sbjct: 194 FRLKSAMLASGVLPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDG 253

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +CK G    AM++  RML   L+ D  TY  LI+G CK  ++  A +L+  M   G  P 
Sbjct: 254 HCKNGRVDFAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPD 313

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ L+DG C + + +   +     +   + +D   Y ALI   C++ +   A+++  
Sbjct: 314 KFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYAALISGLCQEGRSVDAEKMLR 373

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
            M   G+  D+  YT +   + + G+    S +L +M R
Sbjct: 374 EMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQR 412



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 147/324 (45%), Gaps = 34/324 (10%)

Query: 232 RADLFTYNTLIALYCKKGMHYEALA-VQDRMEREGISP-----------------DIVTY 273
           R  L +Y T+I   C   M  EA + +Q  + R+G                    DI  +
Sbjct: 13  RHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVF 72

Query: 274 NSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKG 333
           + LI  +   G +R+A   +R     T  H  +       CR   LE  ++L+      G
Sbjct: 73  SGLITAYLETGFLRDAIECYR----LTREHKLWVPF--DTCR-KVLEHLMKLKYFKLVWG 125

Query: 334 VYPGVVT---------YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
            Y  ++          +N ++ + CK+G IR A  + + + +  + P  V+ NTL+N Y 
Sbjct: 126 FYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 185

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           ++G      ++K+ ML +G++ D +TY  LI+G CK  +MD A EL   ML  G  P+  
Sbjct: 186 RLGHLDEGFRLKSAMLASGVLPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGV 245

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
           +++ L+DG+C     +  +++    +S+ L  D+  Y  LI   CKK  +  A  L + M
Sbjct: 246 TFTTLIDGHCKNGRVDFAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEM 305

Query: 505 QGNGILGDSVIYTSLAYAYWRAGE 528
              G+  D   YT+L     + G+
Sbjct: 306 SMKGLKPDKFTYTTLIDGCCKEGD 329



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 68/139 (48%), Gaps = 3/139 (2%)

Query: 141 ANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANI 200
            +LK   D   + D+M +  L P     T L++   K+   D  ++  K+M+Q  +  + 
Sbjct: 293 GDLKQAHD---LIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDD 349

Query: 201 HLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDR 260
             Y  LI   C+       EK+L EM    ++ D  TY  +I  +CKKG  ++   +   
Sbjct: 350 VAYAALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKE 409

Query: 261 MEREGISPDIVTYNSLIHG 279
           M+R G +P +VTYN L++G
Sbjct: 410 MQRNGHAPSVVTYNVLMNG 428


>gi|410109943|gb|AFV61051.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           rotundifolia]
          Length = 425

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 127/422 (30%), Positives = 227/422 (53%), Gaps = 3/422 (0%)

Query: 67  AESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS-VLNALVKIHDD 125
           +  A   ++H+L S+ TMIH L  ++ F  A+++++ +  R    + S V  A+++    
Sbjct: 2   SSPANSTFRHTLHSYCTMIHFLCTHQMFSEAKSLIQVVVSRKGKGSASAVFAAILETKGT 61

Query: 126 PDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVW 185
              + +V S L+  Y      +D ++ +   R H L      C  +L  L K +   +VW
Sbjct: 62  QRSDIYVFSGLITAYLESGFLRDAIECYTLTREHKLWVPFDTCRKVLEHLMKLKYFKLVW 121

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
             Y+ +++ G  A+++ +N+L+H  CK  D+   + +   +    +R  + +YNTL+  Y
Sbjct: 122 GFYEDILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGY 181

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNH 303
            + G   E   ++  M   G+ PD+ TY+ LI+G C+E +M +A  LF +  +KG  PN 
Sbjct: 182 IRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNG 241

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
           VT+TTLIDG+C+   ++ A+ + + M ++ + P ++TYN+++  LCK+G ++ A+ L++E
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDE 301

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
           M+ K + PD  T  TLI+  CK GD  +A + + RM++  + LD   Y ALI G C+   
Sbjct: 302 MSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGR 361

Query: 424 MDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRA 483
              A+++L  ML  G  P   +Y+ +++ +C K +     KLL E    G    V  Y  
Sbjct: 362 SVDAEKMLREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAPSVVTYNV 421

Query: 484 LI 485
           L+
Sbjct: 422 LM 423



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 93/279 (33%), Positives = 148/279 (53%), Gaps = 2/279 (0%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           G    +  +N L+H FC++G +R A+ +F  I   G  P+ V+Y TL++GY R  DL+E 
Sbjct: 131 GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEG 190

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            RL+  M A GV P V TY+ ++  LCKE ++ DAN L +EM  K + P+ VT  TLI+ 
Sbjct: 191 FRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDG 250

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +CK G    AM++  +ML   L  D  TY  LI+G CK  ++  A +L+  M   G  P 
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPD 310

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ L+DG C + + +   +     +   + +D   Y ALI   C++ +   A+++  
Sbjct: 311 KFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLR 370

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
            M   G+  D   YT +   + + G+    S +L +M R
Sbjct: 371 EMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEMQR 409



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 147/324 (45%), Gaps = 34/324 (10%)

Query: 232 RADLFTYNTLIALYCKKGMHYEALA-VQDRMEREGISP-----------------DIVTY 273
           R  L +Y T+I   C   M  EA + +Q  + R+G                    DI  +
Sbjct: 10  RHTLHSYCTMIHFLCTHQMFSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVF 69

Query: 274 NSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKG 333
           + LI  +   G +R+A   +      T  H  +       CR   LE  ++L+      G
Sbjct: 70  SGLITAYLESGFLRDAIECYT----LTREHKLWVPF--DTCRKV-LEHLMKLKYFKLVWG 122

Query: 334 VYPGVVT---------YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
            Y  ++          +N ++ + CK+G IR A  + + + +  + P  V+ NTL+N Y 
Sbjct: 123 FYEDILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 182

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           ++GD     ++K+ ML +G+  D +TY  LI+G CK  +MD A EL   ML  G  P+  
Sbjct: 183 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGV 242

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
           +++ L+DG+C     +  +++  + +S+ L  D+  Y  LI   CKK  +  A  L + M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEM 302

Query: 505 QGNGILGDSVIYTSLAYAYWRAGE 528
              G+  D   YT+L     + G+
Sbjct: 303 SMKGLKPDKFTYTTLIDGCCKEGD 326



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 69/139 (49%), Gaps = 3/139 (2%)

Query: 141 ANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANI 200
            +LK   D   + D+M +  L P     T L++   K+   D  ++  K+M+Q  +  + 
Sbjct: 290 GDLKQAHD---LIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDD 346

Query: 201 HLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDR 260
             Y  LI   C+       EK+L EM    ++ D+ TY  +I  +CKKG  ++   +   
Sbjct: 347 VAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKE 406

Query: 261 MEREGISPDIVTYNSLIHG 279
           M+R G +P +VTYN L++G
Sbjct: 407 MQRNGHAPSVVTYNVLMNG 425


>gi|255660826|gb|ACU25582.1| pentatricopeptide repeat-containing protein [Phyla dulcis]
          Length = 418

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 122/410 (29%), Positives = 225/410 (54%), Gaps = 3/410 (0%)

Query: 67  AESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS-VLNALVKIHDD 125
           +  A   ++H+L S+ TMIH L  ++ F  A+++++ +  R    + S V  A+++   +
Sbjct: 2   SSPANSTFRHTLHSYCTMIHFLCTHQMFSEAKSLIQVVVSRKGKGSASAVFAAIIETKGN 61

Query: 126 PDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVW 185
              + +V S L+  Y      +D ++ +   R H        C  +L  L K +  ++VW
Sbjct: 62  QRSDIYVFSGLITAYLESGFLRDAVECYRLTREHKFWVPFDTCKKMLEHLVKLKYFNLVW 121

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
             Y+++++ G  A+++ +N+L+H  CK  D+   + +   +    +R  + +YNTL+  Y
Sbjct: 122 AFYEEILECGYPASLYFFNILMHRFCKEGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGY 181

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNH 303
            + G   E   ++  M   G+ PD+ TY+ LI+G C+E +M +A  LF +  +KG  PN 
Sbjct: 182 IRLGDLNEGFKLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFEEMLVKGLVPNG 241

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
           VT+TTLIDG+C+   ++ A+ + + M ++ + P ++TYN+++  LCK+G +  A+ L++E
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEVYKQMLSQSLLPDLITYNTLIYGLCKKGALNQAHDLMDE 301

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
           M+ K + PD +T  TLI+  CK GD  +A + + RM++  + LD   Y ALI G C+   
Sbjct: 302 MSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGR 361

Query: 424 MDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
              A++++  ML  G  P   +Y+ +++ +C K +     KLL E    G
Sbjct: 362 SVDAEKMMREMLSFGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDG 411



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 94/279 (33%), Positives = 148/279 (53%), Gaps = 2/279 (0%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           G    +  +N L+H FC+EG +R A+ +F  I   G  P+ V+Y TL++GY R  DL E 
Sbjct: 131 GYPASLYFFNILMHRFCKEGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLNEG 190

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            +L+  M A GV P V TY+ ++  LCKE ++ DAN L  EM  K + P+ VT  TLI+ 
Sbjct: 191 FKLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFEEMLVKGLVPNGVTFTTLIDG 250

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +CK G    AM+V  +ML   L+ D  TY  LI+G CK   ++ A +L+  M   G  P 
Sbjct: 251 HCKNGRVDLAMEVYKQMLSQSLLPDLITYNTLIYGLCKKGALNQAHDLMDEMSMKGLKPD 310

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ L+DG C + + +   +     +   + +D   Y ALI   C++ +   A+++  
Sbjct: 311 KITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMMR 370

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
            M   G+  D+  YT +   + + G+    S +L +M R
Sbjct: 371 EMLSFGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQR 409



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 82/266 (30%), Positives = 135/266 (50%), Gaps = 8/266 (3%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           SV +A+ K    P   S+  + L+  Y  L    +G ++   M    + P ++  +VL+N
Sbjct: 157 SVFDAITKWGLRPSVVSY--NTLMNGYIRLGDLNEGFKLKSAMHASGVQPDVYTYSVLIN 214

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
            L K+   D   +++++M+  G+V N   +  LI   CK+  VD   ++  +M  + +  
Sbjct: 215 GLCKESKMDDANELFEEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEVYKQMLSQSLLP 274

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA---- 289
           DL TYNTLI   CKKG   +A  + D M  +G+ PD +TY +LI G C+EG +  A    
Sbjct: 275 DLITYNTLIYGLCKKGALNQAHDLMDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHR 334

Query: 290 RRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLC 349
           +R+ ++      + V YT LI G C+     +A ++   M + G+ P   TY  I+ + C
Sbjct: 335 KRMIQE--NIRLDDVAYTALISGLCQEGRSVDAEKMMREMLSFGLKPDTGTYTMIINEFC 392

Query: 350 KEGRIRDANRLLNEMNEKKIAPDNVT 375
           K+G +   ++LL EM     AP  VT
Sbjct: 393 KKGDVWKGSKLLKEMQRDGHAPSVVT 418



 Score =  125 bits (313), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 87/318 (27%), Positives = 147/318 (46%), Gaps = 22/318 (6%)

Query: 232 RADLFTYNTLIALYCKKGMHYEALA-VQDRMEREGISP-----------------DIVTY 273
           R  L +Y T+I   C   M  EA + +Q  + R+G                    DI  +
Sbjct: 10  RHTLHSYCTMIHFLCTHQMFSEAKSLIQVVVSRKGKGSASAVFAAIIETKGNQRSDIYVF 69

Query: 274 NSLIHGFCREGRMREA---RRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMA 330
           + LI  +   G +R+A    RL R+ K   P   T   +++   +           E + 
Sbjct: 70  SGLITAYLESGFLRDAVECYRLTREHKFWVPFD-TCKKMLEHLVKLKYFNLVWAFYEEIL 128

Query: 331 AKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTA 390
             G    +  +N ++ + CKEG IR A  + + + +  + P  V+ NTL+N Y ++GD  
Sbjct: 129 ECGYPASLYFFNILMHRFCKEGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLN 188

Query: 391 SAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLV 450
              K+K+ M  +G+  D +TY  LI+G CK  +MD A EL   ML  G  P+  +++ L+
Sbjct: 189 EGFKLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFEEMLVKGLVPNGVTFTTLI 248

Query: 451 DGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGIL 510
           DG+C     +  +++  + +S+ L  D+  Y  LI   CKK  ++ A  L + M   G+ 
Sbjct: 249 DGHCKNGRVDLAMEVYKQMLSQSLLPDLITYNTLIYGLCKKGALNQAHDLMDEMSMKGLK 308

Query: 511 GDSVIYTSLAYAYWRAGE 528
            D + YT+L     + G+
Sbjct: 309 PDKITYTTLIDGCCKEGD 326


>gi|255660836|gb|ACU25587.1| pentatricopeptide repeat-containing protein [Lampayo castellani]
          Length = 418

 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 123/404 (30%), Positives = 218/404 (53%), Gaps = 3/404 (0%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS-VLNALVKIHDDPDGNSH 131
            ++H+L S+ TMIH L  ++    A+N+++ +  R    + S V  A+++       + +
Sbjct: 8   TFRHTLHSYCTMIHFLCTHQMLPEAKNLIQIVVSRKGKDSASAVFEAILEAKGAQRSDVY 67

Query: 132 VLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKM 191
           V S L+  Y       D L+ F   R H        C  +L    K +   +VW  YK++
Sbjct: 68  VFSGLITAYLESGFLHDALECFRLTREHKFWVPFDTCRKVLEHFMKLKYFKLVWGFYKEI 127

Query: 192 VQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMH 251
           ++ G  A+++ +N+L+H  CK  ++   + +  E+    +R  + ++NTL+  Y + G  
Sbjct: 128 LECGYPASLYFFNILMHRFCKEGEMRLAQSVFDEITKWGLRPSVVSFNTLMNGYIRLGDL 187

Query: 252 YEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTL 309
            E   ++  M   G+ PD+ TY+ LI+G C+E +M +A  LF ++   G  PN VT+TTL
Sbjct: 188 DEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMNDANELFGEMIGNGLVPNGVTFTTL 247

Query: 310 IDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI 369
           IDG+C+   ++ A+   + M  +G  P ++TYN+++  LCK+G ++ A  L++EM+ K +
Sbjct: 248 IDGHCKTGSIDLAMETYKEMLRQGFSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGL 307

Query: 370 APDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKE 429
            PD +T  TLI+  CK GD  +A+  + RM++  + LD   Y ALI G C+  +   A++
Sbjct: 308 KPDKITYTTLIDGSCKEGDLETALYYRKRMIKENIRLDDVAYTALISGLCREGQSVDAEK 367

Query: 430 LLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
           +L  ML  G  P   +Y+ +++ +C K + +   KLL E    G
Sbjct: 368 MLREMLSVGLKPDNGTYTMIINEFCKKGDVKTGSKLLKEMQRDG 411



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 107/348 (30%), Positives = 168/348 (48%), Gaps = 39/348 (11%)

Query: 232 RADLFTYNTLIALYCKKGMHYEALAVQDRMERE--------------------------- 264
           R+D++ ++ LI  Y + G  ++AL    R+ RE                           
Sbjct: 63  RSDVYVFSGLITAYLESGFLHDALECF-RLTREHKFWVPFDTCRKVLEHFMKLKYFKLVW 121

Query: 265 ---------GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGY 313
                    G    +  +N L+H FC+EG MR A+ +F +I   G  P+ V++ TL++GY
Sbjct: 122 GFYKEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDEITKWGLRPSVVSFNTLMNGY 181

Query: 314 CRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDN 373
            R  DL+E  RL+  M A GV P V TY+ ++  LCKE ++ DAN L  EM    + P+ 
Sbjct: 182 IRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMNDANELFGEMIGNGLVPNG 241

Query: 374 VTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFG 433
           VT  TLI+ +CK G    AM+    ML  G   D  TY  LI+G CK  ++  A++L+  
Sbjct: 242 VTFTTLIDGHCKTGSIDLAMETYKEMLRQGFSPDLITYNTLIYGLCKKGDLKQAQDLIDE 301

Query: 434 MLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEK 493
           M   G  P   +Y+ L+DG C + + E  L      +   + +D   Y ALI   C++ +
Sbjct: 302 MSMKGLKPDKITYTTLIDGSCKEGDLETALYYRKRMIKENIRLDDVAYTALISGLCREGQ 361

Query: 494 VDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
              A+++   M   G+  D+  YT +   + + G+ K  S +L +M R
Sbjct: 362 SVDAEKMLREMLSVGLKPDNGTYTMIINEFCKKGDVKTGSKLLKEMQR 409



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 84/318 (26%), Positives = 149/318 (46%), Gaps = 23/318 (7%)

Query: 239 NTLIALYCKKGMHYEALAVQDRMEREGIS-PDIVTYNSLIHGFCREGRMREARRLFRDIK 297
           N +  +  +KG    +   +  +E +G    D+  ++ LI  +   G + +A   FR   
Sbjct: 34  NLIQIVVSRKGKDSASAVFEAILEAKGAQRSDVYVFSGLITAYLESGFLHDALECFR--- 90

Query: 298 GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVT---------YNSILRKL 348
             T  H  +       CR   LE  ++L+      G Y  ++          +N ++ + 
Sbjct: 91  -LTREHKFWVPF--DTCR-KVLEHFMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRF 146

Query: 349 CKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ 408
           CKEG +R A  + +E+ +  + P  V+ NTL+N Y ++GD     ++K+ M  +G+  D 
Sbjct: 147 CKEGEMRLAQSVFDEITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDV 206

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
           +TY  LI+G CK  +M+ A EL   M+  G  P+  +++ L+DG+C   + +  ++   E
Sbjct: 207 YTYSVLINGLCKESKMNDANELFGEMIGNGLVPNGVTFTTLIDGHCKTGSIDLAMETYKE 266

Query: 469 FVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
            + +G   D+  Y  LI   CKK  +  AQ L + M   G+  D + YT+L     + G 
Sbjct: 267 MLRQGFSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEG- 325

Query: 529 PKACSDILDDMYRRRLMI 546
                D+   +Y R+ MI
Sbjct: 326 -----DLETALYYRKRMI 338



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 88/310 (28%), Positives = 145/310 (46%), Gaps = 29/310 (9%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKI---ALRDFLSTPSVLNALVKIHDDPDGN 129
            Y  SL     ++H   K    + AQ++ ++I    LR     PSV++            
Sbjct: 131 GYPASLYFFNILMHRFCKEGEMRLAQSVFDEITKWGLR-----PSVVS------------ 173

Query: 130 SHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYK 189
               + L+  Y  L    +G ++   M    + P ++  +VL+N L K+   +   +++ 
Sbjct: 174 ---FNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMNDANELFG 230

Query: 190 KMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKG 249
           +M+  G+V N   +  LI   CK+  +D   +   EM  +    DL TYNTLI   CKKG
Sbjct: 231 EMIGNGLVPNGVTFTTLIDGHCKTGSIDLAMETYKEMLRQGFSPDLITYNTLIYGLCKKG 290

Query: 250 MHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA----RRLFRDIKGATPNHVT 305
              +A  + D M  +G+ PD +TY +LI G C+EG +  A    +R+ ++      + V 
Sbjct: 291 DLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETALYYRKRMIKE--NIRLDDVA 348

Query: 306 YTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMN 365
           YT LI G CR     +A ++   M + G+ P   TY  I+ + CK+G ++  ++LL EM 
Sbjct: 349 YTALISGLCREGQSVDAEKMLREMLSVGLKPDNGTYTMIINEFCKKGDVKTGSKLLKEMQ 408

Query: 366 EKKIAPDNVT 375
                P  VT
Sbjct: 409 RDGHVPCVVT 418



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 65/293 (22%), Positives = 117/293 (39%), Gaps = 20/293 (6%)

Query: 272 TYNSLIHGFCREGRMREARRLFR-------------------DIKGATPNHV-TYTTLID 311
           +Y ++IH  C    + EA+ L +                   + KGA  + V  ++ LI 
Sbjct: 15  SYCTMIHFLCTHQMLPEAKNLIQIVVSRKGKDSASAVFEAILEAKGAQRSDVYVFSGLIT 74

Query: 312 GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAP 371
            Y  +  L +AL    +      +    T   +L    K    +       E+ E     
Sbjct: 75  AYLESGFLHDALECFRLTREHKFWVPFDTCRKVLEHFMKLKYFKLVWGFYKEILECGYPA 134

Query: 372 DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
                N L++ +CK G+   A  V + + + GL     ++  L++G+ +  ++D    L 
Sbjct: 135 SLYFFNILMHRFCKEGEMRLAQSVFDEITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLK 194

Query: 432 FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
             M  +G  P   +YS L++G C ++      +L  E +  GL  +   +  LI   CK 
Sbjct: 195 SAMHASGVQPDVYTYSVLINGLCKESKMNDANELFGEMIGNGLVPNGVTFTTLIDGHCKT 254

Query: 492 EKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL 544
             +D A   +  M   G   D + Y +L Y   + G+ K   D++D+M  + L
Sbjct: 255 GSIDLAMETYKEMLRQGFSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGL 307


>gi|410109885|gb|AFV61022.1| pentatricopeptide repeat-containing protein 11, partial
           [Coelocarpum swinglei]
          Length = 429

 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 127/427 (29%), Positives = 226/427 (52%), Gaps = 4/427 (0%)

Query: 63  FFKWAESAV-PNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS-VLNALV 120
           FF W        ++H+L S+ TMIH L  ++    A+N+++ +  R   ++ S V  A++
Sbjct: 1   FFTWLSFPTNSTFRHTLHSYCTMIHFLCTHQMLPEAKNLIQVVVSRKGKNSASAVFAAIL 60

Query: 121 KIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRL 180
           +       + +V S L+  Y      +D ++ +   R H        C  +L  L K + 
Sbjct: 61  ETQGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKY 120

Query: 181 TDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNT 240
             +VW  YK++++ G  A+++ +N+L+H  CK  D+     +   +    +R  + ++NT
Sbjct: 121 FKLVWXFYKEILECGYPASLYFFNILMHRFCKEGDIRVALSVFDAITKWGLRPSVVSFNT 180

Query: 241 LIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KG 298
           L+  Y + G   E   ++  M   G+ PD+ TY+ LI+G C+E +M +A  LF ++  KG
Sbjct: 181 LMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKG 240

Query: 299 ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDAN 358
             PN VT+TTLIDG+C+   ++ A+ + + M ++ + P ++TYN+++  LCK+G ++ A 
Sbjct: 241 LVPNGVTFTTLIDGHCKNGRVDLAMEVYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQ 300

Query: 359 RLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGF 418
            L++EM  K + PD ++  TLI+  CK GD  +A + + RM++  + LD   Y ALI G 
Sbjct: 301 DLIDEMRMKGLKPDKISYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGL 360

Query: 419 CKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDV 478
           C+      A+++L  ML  G  P   +Y+ +++ +C K +     KLL E    G    V
Sbjct: 361 CQEGRSIDAEKMLREMLSVGLRPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSV 420

Query: 479 SVYRALI 485
             Y  L+
Sbjct: 421 VTYNVLM 427



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 96/279 (34%), Positives = 150/279 (53%), Gaps = 2/279 (0%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           G    +  +N L+H FC+EG +R A  +F  I   G  P+ V++ TL++GY R  DL+E 
Sbjct: 135 GYPASLYFFNILMHRFCKEGDIRVALSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEG 194

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            RL+  M A GV P V TY+ ++  LCKE ++ DAN L +EM +K + P+ VT  TLI+ 
Sbjct: 195 FRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDG 254

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +CK G    AM+V  +ML   L  D  TY  LI+G CK  ++  A++L+  M   G  P 
Sbjct: 255 HCKNGRVDLAMEVYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMRMKGLKPD 314

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             SY+ L+DG C + + E   +     +   + +D   Y ALI   C++ +   A+++  
Sbjct: 315 KISYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSIDAEKMLR 374

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
            M   G+  D+  YT +   + + G+    S +L +M R
Sbjct: 375 EMLSVGLRPDTGTYTMIINEFCKKGDVWTGSKLLKEMQR 413



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 86/305 (28%), Positives = 148/305 (48%), Gaps = 27/305 (8%)

Query: 239 NTLIALYCKKGMHYEALAVQDRMEREGIS-PDIVTYNSLIHGFCREGRMREA---RRLFR 294
           N +  +  +KG +  +      +E +G    DI  ++ LI  +   G +R+A    RL R
Sbjct: 38  NLIQVVVSRKGKNSASAVFAAILETQGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTR 97

Query: 295 DIKGATPNHVTYTTLIDGYCRANDLEEALRLR----------EVMAAKGVYPG-VVTYNS 343
           + K   P            CR   LE  ++L+          E++     YP  +  +N 
Sbjct: 98  EHKFWVPFDT---------CRKV-LEHLMKLKYFKLVWXFYKEILECG--YPASLYFFNI 145

Query: 344 ILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAG 403
           ++ + CKEG IR A  + + + +  + P  V+ NTL+N Y ++GD     ++K+ M  +G
Sbjct: 146 LMHRFCKEGDIRVALSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASG 205

Query: 404 LMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALL 463
           +  D +TY  LI+G CK  +MD A EL   MLD G  P+  +++ L+DG+C     +  +
Sbjct: 206 VQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAM 265

Query: 464 KLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAY 523
           ++  + +S+ L  D+  Y  LI   CKK  +  AQ L + M+  G+  D + YT+L    
Sbjct: 266 EVYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMRMKGLKPDKISYTTLIDGC 325

Query: 524 WRAGE 528
            + G+
Sbjct: 326 CKEGD 330



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 85/358 (23%), Positives = 151/358 (42%), Gaps = 14/358 (3%)

Query: 232 RADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARR 291
           R+D++ ++ LI  Y + G   +A+                T   ++    +    +    
Sbjct: 67  RSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWX 126

Query: 292 LFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLC 349
            +++I   G   +   +  L+  +C+  D+  AL + + +   G+ P VV++N+++    
Sbjct: 127 FYKEILECGYPASLYFFNILMHRFCKEGDIRVALSVFDAITKWGLRPSVVSFNTLMNGYI 186

Query: 350 KEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQF 409
           + G + +  RL + M+   + PD  T + LIN  CK      A ++ + ML+ GL+ +  
Sbjct: 187 RLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGV 246

Query: 410 TYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEF 469
           T+  LI G CK   +D+A E+   ML    SP   +Y+ L+ G C K + +    L+DE 
Sbjct: 247 TFTTLIDGHCKNGRVDLAMEVYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 306

Query: 470 VSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEP 529
             +GL  D   Y  LI   CK+  ++ A      M    I  D V YT+L     + G  
Sbjct: 307 RMKGLKPDKISYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRS 366

Query: 530 KACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKEMQ 587
                +L +M    L      Y      + K  ++    W+           + KEMQ
Sbjct: 367 IDAEKMLREMLSVGLRPDTGTYTMIINEFCKKGDV----WT--------GSKLLKEMQ 412



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/293 (21%), Positives = 123/293 (41%), Gaps = 20/293 (6%)

Query: 272 TYNSLIHGFCREGRMREARRLFR-------------------DIKGATPNHV-TYTTLID 311
           +Y ++IH  C    + EA+ L +                   + +G   + +  ++ LI 
Sbjct: 19  SYCTMIHFLCTHQMLPEAKNLIQVVVSRKGKNSASAVFAAILETQGTQRSDIYVFSGLIT 78

Query: 312 GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAP 371
            Y  +  L +A+    +      +    T   +L  L K    +       E+ E     
Sbjct: 79  AYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWXFYKEILECGYPA 138

Query: 372 DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
                N L++ +CK GD   A+ V + + + GL     ++  L++G+ +  ++D    L 
Sbjct: 139 SLYFFNILMHRFCKEGDIRVALSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLK 198

Query: 432 FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
             M  +G  P   +YS L++G C ++  +   +L DE + +GL  +   +  LI   CK 
Sbjct: 199 SAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKN 258

Query: 492 EKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL 544
            +VD A  ++  M    +  D + Y +L Y   + G+ K   D++D+M  + L
Sbjct: 259 GRVDLAMEVYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMRMKGL 311



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/139 (30%), Positives = 70/139 (50%), Gaps = 3/139 (2%)

Query: 141 ANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANI 200
            +LK  QD   + D+MR+  L P   + T L++   K+   +  ++  K+M+Q  +  + 
Sbjct: 294 GDLKQAQD---LIDEMRMKGLKPDKISYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDD 350

Query: 201 HLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDR 260
             Y  LI   C+       EK+L EM    +R D  TY  +I  +CKKG  +    +   
Sbjct: 351 VAYTALISGLCQEGRSIDAEKMLREMLSVGLRPDTGTYTMIINEFCKKGDVWTGSKLLKE 410

Query: 261 MEREGISPDIVTYNSLIHG 279
           M+R+G  P +VTYN L++G
Sbjct: 411 MQRDGHVPSVVTYNVLMNG 429


>gi|410109931|gb|AFV61045.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           macrophylla]
          Length = 431

 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 127/428 (29%), Positives = 231/428 (53%), Gaps = 4/428 (0%)

Query: 62  AFFKWAES-AVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS-VLNAL 119
           +FF W  S A   ++H+L S+ TMIH L  ++    A+++++ +  R    + S V  A+
Sbjct: 2   SFFTWLSSPANSTFRHTLHSYCTMIHFLCTHQMLWEAKSLIQVVVSRKGKGSASAVFAAI 61

Query: 120 VKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDR 179
           ++       + +V S L+  Y      +D ++ +   R H        C  +L  L K +
Sbjct: 62  LETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLK 121

Query: 180 LTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYN 239
              +VW  YK++++ G  A+++ +N+L+H  CK  D+   + +   +    +R  + +YN
Sbjct: 122 YFKLVWGFYKEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYN 181

Query: 240 TLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IK 297
           TL+  Y + G   E   ++  M   G+ PD+ TY+ LI+G C+E +M +A  LF +  +K
Sbjct: 182 TLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVK 241

Query: 298 GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDA 357
           G  PN V +TTLIDG+C+   ++ A+ + + M ++ + P ++TYN+++  LCK+G ++  
Sbjct: 242 GLVPNGVIFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQV 301

Query: 358 NRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHG 417
           + L++EM+ K + PD +T  TLI+  CK GD  +A + + +M++  + LD+  Y ALI G
Sbjct: 302 HHLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKQMIQENIRLDEVAYTALISG 361

Query: 418 FCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVD 477
            C+      A+++L  ML+ G  P   +Y+ +++ +C K +     KLL E    G    
Sbjct: 362 LCQEGRSVDAEKMLREMLNVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPS 421

Query: 478 VSVYRALI 485
           V  Y  L+
Sbjct: 422 VVTYNVLM 429



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 91/279 (32%), Positives = 148/279 (53%), Gaps = 2/279 (0%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           G    +  +N L+H FC++G +R A+ +F  I   G  P+ V+Y TL++GY R  DL+E 
Sbjct: 137 GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEG 196

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            RL+  M A GV P V TY+ ++  LCKE ++ DAN L +EM  K + P+ V   TLI+ 
Sbjct: 197 FRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVIFTTLIDG 256

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +CK G    AM++  +ML   L+ D  TY  LI+G CK  ++     L+  M   G  P 
Sbjct: 257 HCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQVHHLIDEMSMKGLKPD 316

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ L+DG C + + +   +   + +   + +D   Y ALI   C++ +   A+++  
Sbjct: 317 KITYTTLIDGCCKEGDLDTAFEHRKQMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLR 376

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
            M   G+  D+  YT +   + + G+    S +L +M R
Sbjct: 377 EMLNVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQR 415



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 89/327 (27%), Positives = 149/327 (45%), Gaps = 40/327 (12%)

Query: 232 RADLFTYNTLIALYCKKGMHYEALA-VQDRMEREGISP-----------------DIVTY 273
           R  L +Y T+I   C   M +EA + +Q  + R+G                    DI  +
Sbjct: 16  RHTLHSYCTMIHFLCTHQMLWEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVF 75

Query: 274 NSLIHGFCREGRMREA---RRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMA 330
           + LI  +   G +R+A    RL R+ K   P            CR   LE  ++L+    
Sbjct: 76  SGLITAYLESGFLRDAIECYRLTREHKFWVPFDT---------CR-KVLEHLMKLKYFKL 125

Query: 331 AKGVYPGVVT---------YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
             G Y  ++          +N ++ + CK+G IR A  + + + +  + P  V+ NTL+N
Sbjct: 126 VWGFYKEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMN 185

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
            Y ++GD     ++K+ ML +G+  D +TY  LI+G CK  +MD A EL   ML  G  P
Sbjct: 186 GYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVP 245

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
           +   ++ L+DG+C     +  +++  + +S+ L  D+  Y  LI   CKK  +     L 
Sbjct: 246 NGVIFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQVHHLI 305

Query: 502 NLMQGNGILGDSVIYTSLAYAYWRAGE 528
           + M   G+  D + YT+L     + G+
Sbjct: 306 DEMSMKGLKPDKITYTTLIDGCCKEGD 332



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 64/129 (49%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
            + D+M +  L P     T L++   K+   D  ++  K+M+Q  +  +   Y  LI   
Sbjct: 303 HLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKQMIQENIRLDEVAYTALISGL 362

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           C+       EK+L EM    ++ D  TY  +I  +CKKG  ++   +   M+R+G  P +
Sbjct: 363 CQEGRSVDAEKMLREMLNVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSV 422

Query: 271 VTYNSLIHG 279
           VTYN L++G
Sbjct: 423 VTYNVLMNG 431


>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Glycine max]
          Length = 742

 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 131/408 (32%), Positives = 221/408 (54%), Gaps = 2/408 (0%)

Query: 155 QMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSS 214
           QM     +P + + +V+++   +      V K+ +++ + G+  N + YN +I   CK+ 
Sbjct: 277 QMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTG 336

Query: 215 DVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYN 274
            V + E++L  M+ + +  D   Y TLI+ + K G       + D M+R+ I PD VTY 
Sbjct: 337 RVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYT 396

Query: 275 SLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAK 332
           S+IHG C+ G++ EAR+LF ++  KG  P+ VTYT LIDGYC+A +++EA  L   M  K
Sbjct: 397 SMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEK 456

Query: 333 GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
           G+ P VVTY +++  LCK G +  AN LL+EM+EK + P+  T N LIN  CK+G+   A
Sbjct: 457 GLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQA 516

Query: 393 MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
           +K+   M  AG   D  TY  ++  +CK  EM  A ELL  MLD G  P+  +++ L++G
Sbjct: 517 VKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNG 576

Query: 453 YCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGD 512
           +C     E   +L+   + +G+  + + + +L++++C +  +     ++  M   G++ D
Sbjct: 577 FCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPD 636

Query: 513 SVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAK 560
           +  Y  L   + +A   K    +  +M  +   +T   Y S    + K
Sbjct: 637 TNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYK 684



 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 142/512 (27%), Positives = 257/512 (50%), Gaps = 16/512 (3%)

Query: 63  FFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVK- 121
           FF WA         SL+S   ++ I   +K  + A  ++ +   +  L   +  +   + 
Sbjct: 113 FFDWARL---RRDPSLESLCIVVQIAVASKDLRMAHRLVFEFWEKPHLDVGNSFDRFTER 169

Query: 122 -IHDDPDGNSHVLSWLVIFYANLKMTQDGL-----QVFDQMRVHNLMPHLHACTVLLNSL 175
            I+   D  +H L + V F     + + GL     ++FD++  + ++  + +C + L  L
Sbjct: 170 LIYTYKDWGAHPLVFDVFFQV---LVEAGLLLEAGKLFDKLLNYGVLVSVDSCNLFLARL 226

Query: 176 AKD-RLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRAD 234
           +         ++V+++  ++GV  N   YN+++H  C+   V +   LL +MEF+    D
Sbjct: 227 SNSFDGIRTAFRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPD 286

Query: 235 LFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR 294
           + +Y+ ++  YC+     + L + + ++R+G+ P+  TYNS+I   C+ GR+ EA ++ R
Sbjct: 287 VVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLR 346

Query: 295 DIKGAT--PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEG 352
            +K     P++V YTTLI G+ ++ ++    +L + M  K + P  VTY S++  LC+ G
Sbjct: 347 VMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAG 406

Query: 353 RIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYK 412
           ++ +A +L +EM  K + PD VT   LI+ YCK G+   A  + N+M+E GL  +  TY 
Sbjct: 407 KVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYT 466

Query: 413 ALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSR 472
           AL+ G CK  E+DIA ELL  M + G  P+ C+Y+ L++G C   N E  +KL++E    
Sbjct: 467 ALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLA 526

Query: 473 GLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKAC 532
           G   D   Y  ++  +CK  ++  A  L  +M   G+    V +  L   +  +G  +  
Sbjct: 527 GFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDG 586

Query: 533 SDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
             ++  M  + +M     + S    Y   N +
Sbjct: 587 ERLIKWMLDKGIMPNATTFNSLMKQYCIRNNM 618



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 141/488 (28%), Positives = 243/488 (49%), Gaps = 24/488 (4%)

Query: 80  SHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIF 139
           S+  ++H+L +    K A ++L ++  R                + PD    V+S+ VI 
Sbjct: 254 SYNIILHLLCQLGKVKEAHSLLIQMEFRG---------------NVPD----VVSYSVIV 294

Query: 140 YANLKMTQDG--LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVV 197
               ++ Q G  L++ ++++   L P+ +    +++ L K        +V + M    + 
Sbjct: 295 DGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIF 354

Query: 198 ANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAV 257
            +  +Y  LI    KS +V    KL  EM+ K +  D  TY ++I   C+ G   EA  +
Sbjct: 355 PDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKL 414

Query: 258 QDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCR 315
              M  +G+ PD VTY +LI G+C+ G M+EA  L   +  KG TPN VTYT L+DG C+
Sbjct: 415 FSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCK 474

Query: 316 ANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVT 375
             +++ A  L   M+ KG+ P V TYN+++  LCK G I  A +L+ EM+     PD +T
Sbjct: 475 CGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTIT 534

Query: 376 CNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGML 435
             T+++AYCK+G+ A A ++   ML+ GL     T+  L++GFC +  ++  + L+  ML
Sbjct: 535 YTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWML 594

Query: 436 DAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVD 495
           D G  P+  +++ L+  YC +NN  A +++     ++G+  D + Y  LI+  CK   + 
Sbjct: 595 DKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMK 654

Query: 496 YAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSF- 554
            A  L   M   G    +  Y SL   +++  + +    + ++M     +   +IY  F 
Sbjct: 655 EAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFV 714

Query: 555 SASYAKDN 562
             +Y + N
Sbjct: 715 DVNYEEGN 722



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 118/412 (28%), Positives = 207/412 (50%), Gaps = 2/412 (0%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N +  + ++ F        +  QV   M+   + P     T L++   K     + +K++
Sbjct: 321 NQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLF 380

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
            +M +  +V +   Y  +IH  C++  V +  KL  EM  K ++ D  TY  LI  YCK 
Sbjct: 381 DEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKA 440

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTY 306
           G   EA ++ ++M  +G++P++VTY +L+ G C+ G +  A  L  ++  KG  PN  TY
Sbjct: 441 GEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTY 500

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
             LI+G C+  ++E+A++L E M   G +P  +TY +I+   CK G +  A+ LL  M +
Sbjct: 501 NALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLD 560

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
           K + P  VT N L+N +C  G      ++   ML+ G+M +  T+ +L+  +C    M  
Sbjct: 561 KGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRA 620

Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
             E+  GM   G  P   +Y+ L+ G+C   N +    L  E V +G  +  + Y +LI+
Sbjct: 621 TIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIK 680

Query: 487 RFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDD 538
            F K++K + A++LF  M+ +G + +  IY       +  G  +   ++ D+
Sbjct: 681 GFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFVDVNYEEGNWENTLELCDE 732


>gi|410109887|gb|AFV61023.1| pentatricopeptide repeat-containing protein 11, partial [Junellia
           succulentifolia]
          Length = 429

 Score =  238 bits (607), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 124/427 (29%), Positives = 227/427 (53%), Gaps = 4/427 (0%)

Query: 63  FFKWAESAV-PNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS-VLNALV 120
           FF W  S     ++H+LQS+ TMIH L  ++    A+ +++ +  R    + S V  A++
Sbjct: 1   FFTWLSSPTNSTFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAIL 60

Query: 121 KIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRL 180
           +       + +V S ++  Y      +D ++ +   + H        C  +L  L K + 
Sbjct: 61  ETKGTQRSDIYVFSGIITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKY 120

Query: 181 TDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNT 240
             +VW  Y++ ++ G  A+++ +N+L+H+ CK  ++   + +   +    +R  + ++NT
Sbjct: 121 FKLVWGFYEESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNT 180

Query: 241 LIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KG 298
           L+  Y K G   E   ++  M+  G+ PD+ TY+ LI+G C+E +M +   LF ++   G
Sbjct: 181 LMNGYIKLGDLNEXFRLKKAMQASGVQPDVYTYSVLINGLCKESKMDDXNELFDEMLDXG 240

Query: 299 ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDAN 358
             PN VT+TTLIDG+C+   ++ A+ + + M ++ + P +VTYN+++  LCK+G ++ A 
Sbjct: 241 LVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLVTYNTLIYGLCKKGDLKQAQ 300

Query: 359 RLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGF 418
            L++EM+ K + PD +T  TLI+  CK GD  +A + + RM++  + LD   Y ALI G 
Sbjct: 301 DLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRXRMIKENIRLDDVAYTALISGL 360

Query: 419 CKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDV 478
           C+      A+++L  ML  G  P   +Y+ +++ +C K +     KL+ E    G    V
Sbjct: 361 CQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSV 420

Query: 479 SVYRALI 485
             Y  L+
Sbjct: 421 VTYNVLM 427



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 89/279 (31%), Positives = 148/279 (53%), Gaps = 2/279 (0%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           G    +  +N L+H FC+EG +R A+ +F  I   G  P+ V++ TL++GY +  DL E 
Sbjct: 135 GYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEX 194

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            RL++ M A GV P V TY+ ++  LCKE ++ D N L +EM +  + P+ VT  TLI+ 
Sbjct: 195 FRLKKAMQASGVQPDVYTYSVLINGLCKESKMDDXNELFDEMLDXGLVPNGVTFTTLIDG 254

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +CK G    AM++  +ML   L  D  TY  LI+G CK  ++  A++L+  M   G  P 
Sbjct: 255 HCKNGRVDLAMEIYKQMLSQSLSPDLVTYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPD 314

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ L+DG C + + E   +     +   + +D   Y ALI   C++ +   A+++  
Sbjct: 315 KITYTTLIDGSCKEGDLETAFEYRXRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLR 374

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
            M   G+  +   YT +   + + G+    S ++ +M R
Sbjct: 375 EMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQR 413



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 94/344 (27%), Positives = 154/344 (44%), Gaps = 45/344 (13%)

Query: 232 RADLFTYNTLIALYCKKGMHYEALA-VQDRMEREGISP-----------------DIVTY 273
           R  L +Y T+I   C   M  EA   +Q  + R+G                    DI  +
Sbjct: 14  RHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVF 73

Query: 274 NSLIHGFCREGRMREARRLFRDIKGATPNH---VTYTTLIDGYCRANDLEEALRLREVMA 330
           + +I  +   G +R+A   +R     T  H   V + T     CR   LE  ++L+    
Sbjct: 74  SGIITAYLESGFLRDAIECYR----LTKEHKFRVPFDT-----CRKV-LEHLMKLKYFKL 123

Query: 331 AKGVY---------PGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
             G Y           +  +N ++   CKEG IR A  + + + +  + P  V+ NTL+N
Sbjct: 124 VWGFYEESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMN 183

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
            Y K+GD     ++K  M  +G+  D +TY  LI+G CK  +MD   EL   MLD G  P
Sbjct: 184 GYIKLGDLNEXFRLKKAMQASGVQPDVYTYSVLINGLCKESKMDDXNELFDEMLDXGLVP 243

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
           +  +++ L+DG+C     +  +++  + +S+ L  D+  Y  LI   CKK  +  AQ L 
Sbjct: 244 NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLVTYNTLIYGLCKKGDLKQAQDLI 303

Query: 502 NLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
           + M   G+  D + YT+L     + G+ +   +     YR R++
Sbjct: 304 DEMSMKGLKPDKITYTTLIDGSCKEGDLETAFE-----YRXRMI 342



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/139 (27%), Positives = 68/139 (48%), Gaps = 3/139 (2%)

Query: 141 ANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANI 200
            +LK  QD   + D+M +  L P     T L++   K+   +  ++   +M++  +  + 
Sbjct: 294 GDLKQAQD---LIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRXRMIKENIRLDD 350

Query: 201 HLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDR 260
             Y  LI   C+       EK+L EM    ++ ++ TY  +I  +CKKG  +    +   
Sbjct: 351 VAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKE 410

Query: 261 MEREGISPDIVTYNSLIHG 279
           M+R+G  P +VTYN L++G
Sbjct: 411 MQRDGYVPSVVTYNVLMNG 429


>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Brachypodium distachyon]
          Length = 718

 Score =  238 bits (607), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 137/406 (33%), Positives = 217/406 (53%), Gaps = 4/406 (0%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           V D MR     P++     L+ +  +    D   ++   M + GV  ++  +N +++  C
Sbjct: 177 VGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLC 236

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           K+  ++   K+  EM  + +  D  +YNTL++ YCK G  +EALAV   M ++G+ PD+V
Sbjct: 237 KAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVV 296

Query: 272 TYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           T+ SLIH  CR G +  A  L   ++  G   N  T+T LIDG+CR   L++AL   + M
Sbjct: 297 TFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEM 356

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
               + P VV YN ++   CK GR+ +A  L++EM  K + PD VT +T+++ YCKIGDT
Sbjct: 357 RECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDT 416

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
            SA ++  +ML+ G++ D  TY +LI G C+ + +  A EL   ML  G  P   +Y+ L
Sbjct: 417 DSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTL 476

Query: 450 VDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGI 509
           +DG+C + N +  L L DE + +G+  DV  Y  LI    K  +   AQRL   +     
Sbjct: 477 IDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDP 536

Query: 510 LGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITL-KIYRSF 554
           + D++ Y +L +   R  E K+   +L     + LM    K+Y+S 
Sbjct: 537 VPDNIKYEALMHC-CRTAEFKSVVALLKGFSMKGLMNQADKVYQSM 581



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 118/392 (30%), Positives = 207/392 (52%), Gaps = 4/392 (1%)

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
           P L A   +L +L+   L     ++   M++ GV  N++ YN+L+ A C     ++   +
Sbjct: 118 PSLLAYNAVLLALSDASLPS-ARRLLASMLRDGVAPNVYTYNILVRALCARGQREEALGV 176

Query: 223 LC-EMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFC 281
           +  +M       ++ TYNTL+A +C+ G    A  +   M   G+ P +VT+N++++G C
Sbjct: 177 VGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLC 236

Query: 282 REGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVV 339
           + GRM +AR++F ++  +G TP+ V+Y TL+ GYC+A  L EAL +   MA KGV P VV
Sbjct: 237 KAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVV 296

Query: 340 TYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRM 399
           T+ S++  +C+ G +  A  L+ +M E+ +  +  T   LI+ +C+ G    A+     M
Sbjct: 297 TFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEM 356

Query: 400 LEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNE 459
            E  +      Y  LI+G+CK   MD A+EL+  M   G  P   +YS ++ GYC   + 
Sbjct: 357 RECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDT 416

Query: 460 EALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
           ++  +L  + + +G+  D   Y +LIR  C++ ++  A  LF  M   G+  D   YT+L
Sbjct: 417 DSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTL 476

Query: 520 AYAYWRAGEPKACSDILDDMYRRRLMITLKIY 551
              + + G  +    + D+M ++ ++  +  Y
Sbjct: 477 IDGHCKEGNVQKALSLHDEMIKKGVLPDVVTY 508



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 123/412 (29%), Positives = 203/412 (49%), Gaps = 21/412 (5%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           +D  ++FD+M    L P   +   L++   K         V+ +M Q GVV ++  +  L
Sbjct: 242 EDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSL 301

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           IHA C++ ++++   L+ +M  + +R + FT+  LI  +C+ G   +AL     M    I
Sbjct: 302 IHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRI 361

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
            P +V YN LI+G+C+ GRM EAR L  ++  KG  P+ VTY+T++ GYC+  D + A  
Sbjct: 362 QPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFE 421

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           L   M  KGV P  +TY+S++R LC+E R+ DA  L  +M +  + PD  T  TLI+ +C
Sbjct: 422 LNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHC 481

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           K G+   A+ + + M++ G++ D  TY  LI G  K+     A+ LLF +      P   
Sbjct: 482 KEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNI 541

Query: 445 SYSWLVDGYCNKNNE-EALLKLLDEFVSRGLC----------------VDVSVYRALIRR 487
            Y  L+  +C +  E ++++ LL  F  +GL                 +D SVY  LI  
Sbjct: 542 KYEALM--HCCRTAEFKSVVALLKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHG 599

Query: 488 FCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
            C+   +  A      +   G   +S    SL    +  G      +++ ++
Sbjct: 600 HCRGGNIMKALSFHKQLLRCGFSPNSTSTISLVRGLFEEGMTVEADNVIQEL 651



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 96/309 (31%), Positives = 167/309 (54%), Gaps = 3/309 (0%)

Query: 261 MEREGISPDIVTYNSLIHGFCREGRMREARRLFRD-IKGA--TPNHVTYTTLIDGYCRAN 317
           M R+G++P++ TYN L+   C  G+  EA  +  D ++GA   PN VTY TL+  +CRA 
Sbjct: 145 MLRDGVAPNVYTYNILVRALCARGQREEALGVVGDDMRGAGCAPNVVTYNTLVAAFCRAG 204

Query: 318 DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCN 377
           +++ A RL  VM   GV P +VT+N+++  LCK GR+ DA ++ +EM  + + PD V+ N
Sbjct: 205 EVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYN 264

Query: 378 TLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA 437
           TL++ YCK G    A+ V   M + G++ D  T+ +LIH  C+A  ++ A  L+  M + 
Sbjct: 265 TLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRER 324

Query: 438 GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYA 497
           G   +  +++ L+DG+C     +  L  + E     +   V  Y  LI  +CK  ++D A
Sbjct: 325 GLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEA 384

Query: 498 QRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSAS 557
           + L + M+  G+  D V Y+++   Y + G+  +  ++   M ++ ++     Y S    
Sbjct: 385 RELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRG 444

Query: 558 YAKDNEILD 566
             ++  + D
Sbjct: 445 LCEERRLGD 453



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 136/465 (29%), Positives = 220/465 (47%), Gaps = 48/465 (10%)

Query: 75  KHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVK-------IHDD-- 125
           + SL +  T+++ L K    + A+ M +++A           N LV        +H+   
Sbjct: 222 RPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALA 281

Query: 126 -----------PDGNSHVLSWLVIFYANLKMT--QDGLQVFDQMRVHNLMPHLHACTVLL 172
                      PD    V+++  + +A  +    +  + +  QMR   L  +    T L+
Sbjct: 282 VFAEMAQKGVVPD----VVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALI 337

Query: 173 NSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVR 232
           +   ++   D      K+M +  +  ++  YNVLI+  CK   +D+  +L+ EME K ++
Sbjct: 338 DGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMK 397

Query: 233 ADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRL 292
            D+ TY+T+++ YCK G    A  +  +M ++G+ PD +TY+SLI G C E R+ +A  L
Sbjct: 398 PDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACEL 457

Query: 293 FRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
           F  +   G  P+  TYTTLIDG+C+  ++++AL L + M  KGV P VVTY+ ++  L K
Sbjct: 458 FEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSK 517

Query: 351 EGRIRDANRLLNEMNEKKIAPDNVT-------CNT--------LINAYCKIGDTASAMKV 395
             R ++A RLL ++  +   PDN+        C T        L+  +   G    A KV
Sbjct: 518 SARTKEAQRLLFKLYYEDPVPDNIKYEALMHCCRTAEFKSVVALLKGFSMKGLMNQADKV 577

Query: 396 KNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLF--GMLDAGFSPSYCSYSWLVDGY 453
              ML+    LD   Y  LIHG C+    +I K L F   +L  GFSP+  S   LV G 
Sbjct: 578 YQSMLDRHWKLDGSVYSVLIHGHCRGG--NIMKALSFHKQLLRCGFSPNSTSTISLVRGL 635

Query: 454 CNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQ 498
             +        ++ E ++     D    +ALI    +KE V Y Q
Sbjct: 636 FEEGMTVEADNVIQELLNCCSLADAETSKALI-DLNRKEGVGYFQ 679



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 69/231 (29%), Positives = 115/231 (49%), Gaps = 2/231 (0%)

Query: 298 GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDA 357
           G  P+ + Y  ++     A+ L  A RL   M   GV P V TYN ++R LC  G+  +A
Sbjct: 115 GYAPSLLAYNAVLLALSDAS-LPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEA 173

Query: 358 NRLL-NEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIH 416
             ++ ++M     AP+ VT NTL+ A+C+ G+  +A ++   M E G+     T+  +++
Sbjct: 174 LGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVN 233

Query: 417 GFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCV 476
           G CKA  M+ A+++   M   G +P   SY+ LV GYC        L +  E   +G+  
Sbjct: 234 GLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVP 293

Query: 477 DVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
           DV  + +LI   C+   ++ A  L   M+  G+  +   +T+L   + R G
Sbjct: 294 DVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNG 344


>gi|297793693|ref|XP_002864731.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297310566|gb|EFH40990.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 732

 Score =  238 bits (606), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 152/469 (32%), Positives = 240/469 (51%), Gaps = 17/469 (3%)

Query: 78  LQSHWTMIHILTKNKHFKSAQNMLEKIA--LRDFLSTPS-----VLNALVKIHDDPDGNS 130
           LQS   +IH+LT    +  A+ +++ +   LR + S P+     + NAL  I   P  + 
Sbjct: 109 LQSFSAVIHVLTGAHKYTLARCLIKSLIERLRRY-SEPTNISHRLFNALEDIQS-PKFSI 166

Query: 131 HVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKK 190
            V S L++ +  + + +D L V  +MR     P   AC  +LN L + R  D VW  Y+ 
Sbjct: 167 GVFSLLIMEFLEMGLFEDALWVSREMRCS---PDSKACLAILNGLVRRRRFDSVWVDYQL 223

Query: 191 MVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGM 250
           M+  G+V ++H+Y+VL   C K     K EKLL EM    V+ +++ Y   I   C++  
Sbjct: 224 MISRGLVPDVHIYSVLFQCCFKQGFPSKKEKLLDEMTSLGVKPNVYIYTIYIRDLCRENK 283

Query: 251 HYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGAT--PNHVTYTT 308
             EA  + + M+  G+ P++ TY+++I G+C+ G +R+A  L+++I  A   PN V + T
Sbjct: 284 MEEAEKMFELMKIHGVVPNLYTYSAMIDGYCKTGNLRQAYGLYKEILVAELLPNVVVFGT 343

Query: 309 LIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKK 368
           L+DG+C+A +L  A  L   M   GV P +  YN ++   CK G + +A  LL+EM    
Sbjct: 344 LVDGFCKARELVAARSLFVHMVKFGVDPNLYVYNCLIHGQCKSGNMLEAMGLLSEMESLN 403

Query: 369 IAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAK 428
           ++PD  T   LIN  C     A A ++  RM    +     TY +LIHGFCK   ++ A 
Sbjct: 404 LSPDVFTYTILINGLCTEERLAEANRLFQRMKNERIFPSSVTYNSLIHGFCKEYNIEKAL 463

Query: 429 ELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRF 488
           +L   M  +G  P+  ++S L+DGYC   N +A + L  E   +G+  DV  Y  LI   
Sbjct: 464 DLCSEMTSSGVEPNIITFSTLIDGYCKVRNIKAAMGLYFEMTIKGIVPDVVTYTTLIDAH 523

Query: 489 CKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILD 537
            K+  +  A RL++ M   GI  +   +  L   +W+ G     SD +D
Sbjct: 524 FKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGR---LSDAID 569



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 105/371 (28%), Positives = 164/371 (44%), Gaps = 50/371 (13%)

Query: 119 LVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKD 178
           L+KIH     N +  S ++  Y      +    ++ ++ V  L+P++     L++   K 
Sbjct: 293 LMKIHGVVP-NLYTYSAMIDGYCKTGNLRQAYGLYKEILVAELLPNVVVFGTLVDGFCKA 351

Query: 179 RLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTY 238
           R       ++  MV+ GV  N+++YN LIH  CKS ++ +   LL EME  ++  D+FTY
Sbjct: 352 RELVAARSLFVHMVKFGVDPNLYVYNCLIHGQCKSGNMLEAMGLLSEMESLNLSPDVFTY 411

Query: 239 NTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--- 295
             LI   C +    EA  +  RM+ E I P  VTYNSLIHGFC+E  + +A  L  +   
Sbjct: 412 TILINGLCTEERLAEANRLFQRMKNERIFPSSVTYNSLIHGFCKEYNIEKALDLCSEMTS 471

Query: 296 ----------------------------------IKGATPNHVTYTTLIDGYCRANDLEE 321
                                             IKG  P+ VTYTTLID + +  +++E
Sbjct: 472 SGVEPNIITFSTLIDGYCKVRNIKAAMGLYFEMTIKGIVPDVVTYTTLIDAHFKEANMKE 531

Query: 322 ALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNV------- 374
           ALRL   M   G++P   T+  ++    KEGR+ DA     E N+       V       
Sbjct: 532 ALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSDAIDFYLENNQAATGKSIVQRSCWKY 591

Query: 375 ---TCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
              TC  LI   C+ G    A +  + M   G+  D ++Y +++    + K +     L 
Sbjct: 592 VGFTC--LIEGLCQNGYILRASRFFSDMKSGGVTPDIWSYVSMLKAHLREKRITDTMMLH 649

Query: 432 FGMLDAGFSPS 442
             M+  G  P+
Sbjct: 650 CDMIKTGILPN 660



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 87/316 (27%), Positives = 140/316 (44%), Gaps = 37/316 (11%)

Query: 261 MEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRAND 318
           M   G+ PD+  Y+ L     ++G   +  +L  ++   G  PN   YT  I   CR N 
Sbjct: 224 MISRGLVPDVHIYSVLFQCCFKQGFPSKKEKLLDEMTSLGVKPNVYIYTIYIRDLCRENK 283

Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT 378
           +EEA ++ E+M   GV P + TY++++   CK G +R A  L  E+   ++ P+ V   T
Sbjct: 284 MEEAEKMFELMKIHGVVPNLYTYSAMIDGYCKTGNLRQAYGLYKEILVAELLPNVVVFGT 343

Query: 379 LINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAG 438
           L++ +CK  +  +A  +   M++ G+  + + Y  LIHG CK+  M  A  LL  M    
Sbjct: 344 LVDGFCKARELVAARSLFVHMVKFGVDPNLYVYNCLIHGQCKSGNMLEAMGLLSEMESLN 403

Query: 439 FS-----------------------------------PSYCSYSWLVDGYCNKNNEEALL 463
            S                                   PS  +Y+ L+ G+C + N E  L
Sbjct: 404 LSPDVFTYTILINGLCTEERLAEANRLFQRMKNERIFPSSVTYNSLIHGFCKEYNIEKAL 463

Query: 464 KLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAY 523
            L  E  S G+  ++  +  LI  +CK   +  A  L+  M   GI+ D V YT+L  A+
Sbjct: 464 DLCSEMTSSGVEPNIITFSTLIDGYCKVRNIKAAMGLYFEMTIKGIVPDVVTYTTLIDAH 523

Query: 524 WRAGEPKACSDILDDM 539
           ++    K    +  DM
Sbjct: 524 FKEANMKEALRLYSDM 539


>gi|410109915|gb|AFV61037.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           brasiliensis]
          Length = 427

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 128/424 (30%), Positives = 227/424 (53%), Gaps = 4/424 (0%)

Query: 66  WAES-AVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS-VLNALVKIH 123
           W  S A   ++H+L S+ TMIH L  ++    A+ +++ +  R    + S V  A+++  
Sbjct: 2   WLSSPANSTFRHTLHSYCTMIHFLCTHQMLSEAKXLIQVVVSRKGKGSASAVFAAILETK 61

Query: 124 DDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDM 183
                +  V S L+  Y   +  +D ++ +   R H        C  +L  L K +   +
Sbjct: 62  GTQRSDIFVFSGLITAYLESEFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKL 121

Query: 184 VWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIA 243
           VW  YK +++ G  A+++ +N+L+H  CK  D+   + +   +    +R  + +YNTL+ 
Sbjct: 122 VWGFYKXILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMN 181

Query: 244 LYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATP 301
            Y + G   E   ++  M   G+ PD+ TY+ LI+G C+E +M +A  LF +  +KG  P
Sbjct: 182 GYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVP 241

Query: 302 NHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLL 361
           N VT+TTLIDG+C+   ++ A+ + + M ++ + P ++TYN+++  LCK+G ++ A+ L+
Sbjct: 242 NGVTFTTLIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHHLI 301

Query: 362 NEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKA 421
           +EM+ K + PD +T  TLI+  CK GD  +A + + RM++  + LD   Y ALI G C+ 
Sbjct: 302 DEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIXLDDVAYTALISGLCQE 361

Query: 422 KEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVY 481
                A+++L  ML  G  P+  +Y+ +++ +C K +     KLL E    G    V  Y
Sbjct: 362 GRSVDAEKMLREMLSVGLKPNXRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTY 421

Query: 482 RALI 485
             L+
Sbjct: 422 NVLM 425



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 93/279 (33%), Positives = 148/279 (53%), Gaps = 2/279 (0%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           G    +  +N L+H FC++G +R A+ +F  I   G  P+ V+Y TL++GY R  DL+E 
Sbjct: 133 GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEG 192

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            RL+  M A GV P V TY+ ++  LCKE ++ DAN L +EM  K + P+ VT  TLI+ 
Sbjct: 193 FRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDG 252

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +CK G    AM++  RML   L+ D  TY  LI+G CK  ++  A  L+  M   G  P 
Sbjct: 253 HCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPD 312

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ L+DG C + + +   +     +   + +D   Y ALI   C++ +   A+++  
Sbjct: 313 KITYTTLIDGCCKEGDLDTAFEHRKRMIQENIXLDDVAYTALISGLCQEGRSVDAEKMLR 372

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
            M   G+  +   YT +   + + G+    S +L +M R
Sbjct: 373 EMLSVGLKPNXRTYTMIINEFCKKGDVWKGSKLLKEMQR 411



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 146/324 (45%), Gaps = 34/324 (10%)

Query: 232 RADLFTYNTLIALYCKKGMHYEA-LAVQDRMEREGISP-----------------DIVTY 273
           R  L +Y T+I   C   M  EA   +Q  + R+G                    DI  +
Sbjct: 12  RHTLHSYCTMIHFLCTHQMLSEAKXLIQVVVSRKGKGSASAVFAAILETKGTQRSDIFVF 71

Query: 274 NSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKG 333
           + LI  +     +R+A   +R     T  H  +       CR   LE  ++L+      G
Sbjct: 72  SGLITAYLESEFLRDAIECYR----LTREHKFWVPF--DTCR-KVLEHLMKLKYFKLVWG 124

Query: 334 VYPGVVT---------YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
            Y  ++          +N ++ + CK+G IR A  + + + +  + P  V+ NTL+N Y 
Sbjct: 125 FYKXILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 184

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           ++GD     ++K+ ML +G+  D +TY  LI+G CK  +MD A EL   ML  G  P+  
Sbjct: 185 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGV 244

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
           +++ L+DG+C     +  +++    +S+ L  D+  Y  LI   CKK  +  A  L + M
Sbjct: 245 TFTTLIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHHLIDEM 304

Query: 505 QGNGILGDSVIYTSLAYAYWRAGE 528
              G+  D + YT+L     + G+
Sbjct: 305 SMKGLKPDKITYTTLIDGCCKEGD 328



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 64/129 (49%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
            + D+M +  L P     T L++   K+   D  ++  K+M+Q  +  +   Y  LI   
Sbjct: 299 HLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIXLDDVAYTALISGL 358

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           C+       EK+L EM    ++ +  TY  +I  +CKKG  ++   +   M+R+G  P +
Sbjct: 359 CQEGRSVDAEKMLREMLSVGLKPNXRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSV 418

Query: 271 VTYNSLIHG 279
           VTYN L++G
Sbjct: 419 VTYNVLMNG 427


>gi|255660834|gb|ACU25586.1| pentatricopeptide repeat-containing protein [Dipyrena glaberrima]
          Length = 418

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 122/404 (30%), Positives = 220/404 (54%), Gaps = 3/404 (0%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS-VLNALVKIHDDPDGNSH 131
            ++H+L S+ TMIH L  ++    A+ +++ +  R    + S V  A+++       + +
Sbjct: 8   TFRHTLHSYCTMIHFLCTHQMLLEAKTLIQIVVSRKGKDSASAVFAAILETKGTQRSDIY 67

Query: 132 VLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKM 191
           V S L+  Y      +D ++ +   R H        C  +L  L K +   +VW  YK++
Sbjct: 68  VFSGLITAYLESGFLRDAIECYRLTREHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYKEI 127

Query: 192 VQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMH 251
           ++ G  A+++ +N+L+H  CK  ++   + +   +    +R  + ++NTL+  Y ++G  
Sbjct: 128 LECGYPASLYFFNILMHRFCKEGEIRLSQSVFDAIRKWGLRPSVVSFNTLMNGYIRQGDL 187

Query: 252 YEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTL 309
            +   ++  M   G+ PD+ TY+ LI+G C+E +M EA  LF ++  KG  PN VT+TTL
Sbjct: 188 DKGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEANELFXEMLDKGLVPNGVTFTTL 247

Query: 310 IDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI 369
           IDG+C+   ++ A+ + + M ++ + P ++TYN+++  LCK+G ++ A  L+NEM+ K +
Sbjct: 248 IDGHCKNGKVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQARNLINEMSMKGL 307

Query: 370 APDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKE 429
            PD +T  TLI+  CK GD  +A + + RM+E  + LD   Y ALI G C+      A++
Sbjct: 308 KPDKITYTTLIDGSCKDGDLETAFEYRKRMIEENIRLDDVAYTALISGLCQEGRSVDAEK 367

Query: 430 LLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
           +L  ML  G  P   +Y+ +++ +C K +     KLL E    G
Sbjct: 368 MLREMLSVGLKPDSGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 92/279 (32%), Positives = 149/279 (53%), Gaps = 2/279 (0%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           G    +  +N L+H FC+EG +R ++ +F  I+  G  P+ V++ TL++GY R  DL++ 
Sbjct: 131 GYPASLYFFNILMHRFCKEGEIRLSQSVFDAIRKWGLRPSVVSFNTLMNGYIRQGDLDKG 190

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            RL+  M A GV P V TY+ ++  LCKE ++ +AN L  EM +K + P+ VT  TLI+ 
Sbjct: 191 FRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEANELFXEMLDKGLVPNGVTFTTLIDG 250

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +CK G    AM++  +ML   L  D  TY  LI+G CK  ++  A+ L+  M   G  P 
Sbjct: 251 HCKNGKVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQARNLINEMSMKGLKPD 310

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ L+DG C   + E   +     +   + +D   Y ALI   C++ +   A+++  
Sbjct: 311 KITYTTLIDGSCKDGDLETAFEYRKRMIEENIRLDDVAYTALISGLCQEGRSVDAEKMLR 370

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
            M   G+  DS  YT +   + + G+    S +L +M R
Sbjct: 371 EMLSVGLKPDSGTYTMIINEFCKKGDVWTGSKLLKEMQR 409



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 94/344 (27%), Positives = 157/344 (45%), Gaps = 45/344 (13%)

Query: 232 RADLFTYNTLIALYCKKGMHYEALA-VQDRMEREGISP-----------------DIVTY 273
           R  L +Y T+I   C   M  EA   +Q  + R+G                    DI  +
Sbjct: 10  RHTLHSYCTMIHFLCTHQMLLEAKTLIQIVVSRKGKDSASAVFAAILETKGTQRSDIYVF 69

Query: 274 NSLIHGFCREGRMREA---RRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMA 330
           + LI  +   G +R+A    RL R+ K   P            CR   LE  ++L+    
Sbjct: 70  SGLITAYLESGFLRDAIECYRLTREHKFRVPFDT---------CRKV-LEHLMKLKYFKL 119

Query: 331 AKGVYPGVVT---------YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
             G Y  ++          +N ++ + CKEG IR +  + + + +  + P  V+ NTL+N
Sbjct: 120 VWGFYKEILECGYPASLYFFNILMHRFCKEGEIRLSQSVFDAIRKWGLRPSVVSFNTLMN 179

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
            Y + GD     ++K+ M  +G+  D +TY  LI+G CK  +MD A EL   MLD G  P
Sbjct: 180 GYIRQGDLDKGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEANELFXEMLDKGLVP 239

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
           +  +++ L+DG+C     +  +++  + +S+ L  D+  Y  LI   CKK  +  A+ L 
Sbjct: 240 NGVTFTTLIDGHCKNGKVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQARNLI 299

Query: 502 NLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
           N M   G+  D + YT+L     + G+ +   +     YR+R++
Sbjct: 300 NEMSMKGLKPDKITYTTLIDGSCKDGDLETAFE-----YRKRMI 338



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 75/261 (28%), Positives = 125/261 (47%), Gaps = 37/261 (14%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           VFD +R   L P + +   L+N   +    D  +++   M   GV  +++ Y+VLI+  C
Sbjct: 158 VFDAIRKWGLRPSVVSFNTLMNGYIRQGDLDKGFRLKSAMHASGVQPDVYTYSVLINGLC 217

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           K S +D+  +L  EM  K +  +  T+ TLI  +CK G    A+ +  +M  + +SPD++
Sbjct: 218 KESKMDEANELFXEMLDKGLVPNGVTFTTLIDGHCKNGKVDLAMEIYKQMLSQSLSPDLI 277

Query: 272 TYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTL-------------------- 309
           TYN+LI+G C++G +++AR L  ++  KG  P+ +TYTTL                    
Sbjct: 278 TYNTLIYGLCKKGDLKQARNLINEMSMKGLKPDKITYTTLIDGSCKDGDLETAFEYRKRM 337

Query: 310 ---------------IDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRI 354
                          I G C+     +A ++   M + G+ P   TY  I+ + CK+G +
Sbjct: 338 IEENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDSGTYTMIINEFCKKGDV 397

Query: 355 RDANRLLNEMNEKKIAPDNVT 375
              ++LL EM      P  VT
Sbjct: 398 WTGSKLLKEMQRDGHVPSVVT 418


>gi|255660848|gb|ACU25593.1| pentatricopeptide repeat-containing protein [Citharexylum
           ligustrinum]
          Length = 418

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 122/410 (29%), Positives = 222/410 (54%), Gaps = 3/410 (0%)

Query: 67  AESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFL-STPSVLNALVKIHDD 125
           ++     ++H+L S+ TMIH L+ ++    A+++++ +  R    S  +V  A+++    
Sbjct: 2   SQPGNSTFRHTLHSYCTMIHFLSTHQRILEAKSLIQIVVSRKGKDSASAVFAAILETKGA 61

Query: 126 PDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVW 185
              + +V S L+  Y      +D ++ F   R H        C  +L  L K +   +VW
Sbjct: 62  QRSDIYVFSGLITAYLESGFLRDAIECFRLTRKHKFWVPFDTCRKVLEHLMKLKYFKLVW 121

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
             YK++++ G   +++ +N+L+H  CK  ++   + +   +    +R  + ++NTLI  Y
Sbjct: 122 GFYKEILECGYPTSLYFFNILMHRFCKEGEIRLAQSVFDAITKCGLRPSVVSFNTLINGY 181

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNH 303
            + G   +   ++  M   G+ PD+ T   LI+G C+E +M EA  LF ++  KG  PN 
Sbjct: 182 IRLGDLDKGFRLKTAMHASGVHPDVYTNTVLINGLCKESKMDEANELFNEMLDKGLVPNG 241

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
           VT+TTLIDG+C++  ++ AL + + M  +G  P ++TYN+++  LC++G ++ A  L+ E
Sbjct: 242 VTFTTLIDGHCKSGRVDLALEIYKQMLRQGYSPDLITYNTLIYGLCRKGDLKQARDLIVE 301

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
           M+ K + PD +T  TLI+  CK GD  +A +++ RM+E  + LD   Y ALI G C+   
Sbjct: 302 MSMKGLKPDKITYTTLIDGSCKEGDLETAFELRKRMIEESIRLDDVAYTALISGLCQEGR 361

Query: 424 MDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
              A+++L  ML  G  P   +Y+ +++G+C + + +   KLL E    G
Sbjct: 362 AVDAEKMLREMLSVGLKPENGTYTMIINGFCKQGDVKTASKLLKEMQRDG 411



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 92/279 (32%), Positives = 152/279 (54%), Gaps = 2/279 (0%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           G    +  +N L+H FC+EG +R A+ +F  I   G  P+ V++ TLI+GY R  DL++ 
Sbjct: 131 GYPTSLYFFNILMHRFCKEGEIRLAQSVFDAITKCGLRPSVVSFNTLINGYIRLGDLDKG 190

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            RL+  M A GV+P V T   ++  LCKE ++ +AN L NEM +K + P+ VT  TLI+ 
Sbjct: 191 FRLKTAMHASGVHPDVYTNTVLINGLCKESKMDEANELFNEMLDKGLVPNGVTFTTLIDG 250

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +CK G    A+++  +ML  G   D  TY  LI+G C+  ++  A++L+  M   G  P 
Sbjct: 251 HCKSGRVDLALEIYKQMLRQGYSPDLITYNTLIYGLCRKGDLKQARDLIVEMSMKGLKPD 310

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ L+DG C + + E   +L    +   + +D   Y ALI   C++ +   A+++  
Sbjct: 311 KITYTTLIDGSCKEGDLETAFELRKRMIEESIRLDDVAYTALISGLCQEGRAVDAEKMLR 370

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
            M   G+  ++  YT +   + + G+ K  S +L +M R
Sbjct: 371 EMLSVGLKPENGTYTMIINGFCKQGDVKTASKLLKEMQR 409



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 82/310 (26%), Positives = 143/310 (46%), Gaps = 22/310 (7%)

Query: 269 DIVTYNSLIHGFCREGRMREARRLFRDIKGATPNH---VTYTTLIDGYCRANDLEEALRL 325
           DI  ++ LI  +   G +R+A   FR     T  H   V + T     CR   LE  ++L
Sbjct: 65  DIYVFSGLITAYLESGFLRDAIECFR----LTRKHKFWVPFDT-----CR-KVLEHLMKL 114

Query: 326 REVMAAKGVYPGVVT---------YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTC 376
           +      G Y  ++          +N ++ + CKEG IR A  + + + +  + P  V+ 
Sbjct: 115 KYFKLVWGFYKEILECGYPTSLYFFNILMHRFCKEGEIRLAQSVFDAITKCGLRPSVVSF 174

Query: 377 NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD 436
           NTLIN Y ++GD     ++K  M  +G+  D +T   LI+G CK  +MD A EL   MLD
Sbjct: 175 NTLINGYIRLGDLDKGFRLKTAMHASGVHPDVYTNTVLINGLCKESKMDEANELFNEMLD 234

Query: 437 AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDY 496
            G  P+  +++ L+DG+C     +  L++  + + +G   D+  Y  LI   C+K  +  
Sbjct: 235 KGLVPNGVTFTTLIDGHCKSGRVDLALEIYKQMLRQGYSPDLITYNTLIYGLCRKGDLKQ 294

Query: 497 AQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSA 556
           A+ L   M   G+  D + YT+L     + G+ +   ++   M    + +    Y +  +
Sbjct: 295 ARDLIVEMSMKGLKPDKITYTTLIDGSCKEGDLETAFELRKRMIEESIRLDDVAYTALIS 354

Query: 557 SYAKDNEILD 566
              ++   +D
Sbjct: 355 GLCQEGRAVD 364



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 82/264 (31%), Positives = 129/264 (48%), Gaps = 4/264 (1%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           SV +A+ K    P   S   + L+  Y  L     G ++   M    + P ++  TVL+N
Sbjct: 157 SVFDAITKCGLRPSVVS--FNTLINGYIRLGDLDKGFRLKTAMHASGVHPDVYTNTVLIN 214

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
            L K+   D   +++ +M+  G+V N   +  LI   CKS  VD   ++  +M  +    
Sbjct: 215 GLCKESKMDEANELFNEMLDKGLVPNGVTFTTLIDGHCKSGRVDLALEIYKQMLRQGYSP 274

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           DL TYNTLI   C+KG   +A  +   M  +G+ PD +TY +LI G C+EG +  A  L 
Sbjct: 275 DLITYNTLIYGLCRKGDLKQARDLIVEMSMKGLKPDKITYTTLIDGSCKEGDLETAFELR 334

Query: 294 RDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
           + +  +    + V YT LI G C+     +A ++   M + G+ P   TY  I+   CK+
Sbjct: 335 KRMIEESIRLDDVAYTALISGLCQEGRAVDAEKMLREMLSVGLKPENGTYTMIINGFCKQ 394

Query: 352 GRIRDANRLLNEMNEKKIAPDNVT 375
           G ++ A++LL EM      P  VT
Sbjct: 395 GDVKTASKLLKEMQRDGHVPCVVT 418


>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 920

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 151/549 (27%), Positives = 266/549 (48%), Gaps = 21/549 (3%)

Query: 34  IASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKH 93
           +  +L   A+ +V L+       P  +   F+ A S     + SL SH  ++HIL + + 
Sbjct: 68  LTPALLQAALRRVRLD-------PDAALHLFRLAPS-----RPSLVSHAQLLHILARARR 115

Query: 94  FKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVF 153
           F  A+ +L  +          +   L +++ D   ++     L+  +A+       L VF
Sbjct: 116 FHDARALLSSLPPH----AEPLFPHLAEVYRDFTFSAVSFDLLLRAHADAGQLSSALNVF 171

Query: 154 DQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKS 213
           D M      P L +C  LLN L +     M   VY +M   GV+ +     ++  A C+ 
Sbjct: 172 DGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRD 231

Query: 214 SDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTY 273
             V +  + + EME   +  +L  Y+ ++  YC  G   +A  + + ++R+G+SP++VTY
Sbjct: 232 GRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTY 291

Query: 274 NSLIHGFCREGRMREARRLFRDIKGATP---NHVTYTTLIDGYCRANDLEEALRLREVMA 330
             L+ G+C++GRM EA R+ +++K       + V Y  +I+GYC+   +++A R+R  M 
Sbjct: 292 TLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMR 351

Query: 331 AKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTA 390
             G++  +  YN+++  LCK GR+ +  ++L EM +  + PD  + NTLI+ YC+ G   
Sbjct: 352 DAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMR 411

Query: 391 SAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLV 450
            A ++   M+  GL     TY  L+ GFC    +D A  L F ML  G +P+  S S L+
Sbjct: 412 KAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLL 471

Query: 451 DGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGIL 510
           DG       E  L L  E ++RGL  +V  +  +I   CK  ++  A+ L + M+     
Sbjct: 472 DGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCP 531

Query: 511 GDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASY--AKDNEILDLF 568
            DS+ Y +L   Y + G+    + +++ M       +++++ SF   +  AK    ++  
Sbjct: 532 PDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDI 591

Query: 569 WSHVVDRGL 577
            S +  RGL
Sbjct: 592 HSEMSARGL 600



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 128/438 (29%), Positives = 221/438 (50%), Gaps = 14/438 (3%)

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG-VVA 198
           Y  +  T+D  ++ + ++   L P++   T+L+    KD   +   +V K+M + G +V 
Sbjct: 263 YCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVV 322

Query: 199 NIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQ 258
           +   Y ++I+  C+   +D   ++  EM    +  +LF YNT+I   CK G   E   V 
Sbjct: 323 DEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVL 382

Query: 259 DRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRA 316
             ME  G+ PD  +YN+LI G+CREG MR+A  + R +   G     +TY TL+ G+C  
Sbjct: 383 QEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSL 442

Query: 317 NDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTC 376
           + +++ALRL  +M  +GV P  ++ +++L  L K G+   A  L  E   + +A + +T 
Sbjct: 443 HAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITF 502

Query: 377 NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD 436
           NT+IN  CKIG  A A ++ +RM E     D  TY+ L  G+CK  ++  A  L+  M  
Sbjct: 503 NTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEH 562

Query: 437 AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDY 496
            GF+PS   ++  + G+        +  +  E  +RGL  ++  Y ALI  +CK+  +  
Sbjct: 563 LGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHE 622

Query: 497 AQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSA 556
           A  L+  M  NG+  +  I ++L   +++ G+    + +L        ++ + +    S 
Sbjct: 623 ACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQK------LVNIDMIPGCSI 676

Query: 557 SYAKDNEILDLFWSHVVD 574
           S  + ++I     SHVVD
Sbjct: 677 STIEIDKI-----SHVVD 689



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 118/471 (25%), Positives = 204/471 (43%), Gaps = 82/471 (17%)

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
           + +L    D L+++  M    + P+  +C+ LL+ L K   T+    ++K+ +  G+  N
Sbjct: 439 FCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKN 498

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
           +  +N +I+  CK   + + E+LL  M+      D  TY TL   YCK G    A  + +
Sbjct: 499 VITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMN 558

Query: 260 RMER-----------------------------------EGISPDIVTYNSLIHGFCREG 284
           +ME                                     G+SP++VTY +LI G+C+EG
Sbjct: 559 KMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEG 618

Query: 285 RMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGV---- 338
            + EA  L+ ++   G  PN    + L+  + +   ++EA  + + +    + PG     
Sbjct: 619 NLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSIST 678

Query: 339 ----------------------VTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTC 376
                                 V +N I+  LCK GRI DA  L   +  K+  PDN T 
Sbjct: 679 IEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTY 738

Query: 377 NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD 436
           ++LI+     G    A  +++ ML AGL  +  TY +LI+G CK+ ++  A  L   +  
Sbjct: 739 SSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQS 798

Query: 437 AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDY 496
            G SP+  +Y+ L+D YC +       KL  + V  G                    ++ 
Sbjct: 799 KGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGY-------------------MEE 839

Query: 497 AQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMIT 547
           A +L + M  N +  + + Y +L + Y ++G  +  S + D+M+ R L+ T
Sbjct: 840 AIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLPT 890



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 119/427 (27%), Positives = 193/427 (45%), Gaps = 64/427 (14%)

Query: 83  TMIHILTKNK-HFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYA 141
           T+   L KN   F +  N L KI          +L+ + ++   PD     L++  +F  
Sbjct: 490 TLARGLAKNVITFNTVINGLCKIG--RMAEAEELLDRMKELRCPPDS----LTYRTLFDG 543

Query: 142 NLKMTQDGLQVFDQMRVHNLMPHL-HACTV-LLNSLAKDRLTDMVW----KVYKKMVQLG 195
             K+ Q G        + N M HL  A +V + NS          W     ++ +M   G
Sbjct: 544 YCKLGQLGTAT----HLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARG 599

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
           +  N+  Y  LI   CK  ++ +   L  EM    +  ++F  + L++ + K+G   EA 
Sbjct: 600 LSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEAN 659

Query: 256 AVQDRMEREGISPDI--------------------------VTYNSLIHGFCREGRMREA 289
            V  ++    + P                            V +N +I G C+ GR+ +A
Sbjct: 660 LVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADA 719

Query: 290 RRLFRDIKGAT--PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRK 347
           + LF  ++     P++ TY++LI G   +  ++EA  LR+VM + G+ P ++TYNS++  
Sbjct: 720 KSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYG 779

Query: 348 LCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLD 407
           LCK G++  A  L N++  K I+P+ +T NTLI+ YCK G T  A K+K +M+E G M +
Sbjct: 780 LCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGYMEE 839

Query: 408 QFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLD 467
                              A +LL  M++    P+Y +Y  L+ GY    N E + KL D
Sbjct: 840 -------------------AIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYD 880

Query: 468 EFVSRGL 474
           E   RGL
Sbjct: 881 EMHIRGL 887



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 115/509 (22%), Positives = 203/509 (39%), Gaps = 67/509 (13%)

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
           Y       D  +V ++MR   +  +L     ++N L K    + V KV ++M  +G+  +
Sbjct: 334 YCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPD 393

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYC------------- 246
            + YN LI   C+   + K  ++   M    + A   TYNTL+  +C             
Sbjct: 394 KYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWF 453

Query: 247 ----------------------KKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREG 284
                                 K G   +AL +       G++ +++T+N++I+G C+ G
Sbjct: 454 LMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIG 513

Query: 285 RMREARRLFRDIKG--ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYN 342
           RM EA  L   +K     P+ +TY TL DGYC+   L  A  L   M   G  P V  +N
Sbjct: 514 RMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFN 573

Query: 343 SILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEA 402
           S +       +    N + +EM+ + ++P+ VT   LI  +CK G+   A  +   M+  
Sbjct: 574 SFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNN 633

Query: 403 GLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS--------------- 447
           G+  + F   AL+  F K  ++D A  +L  +++    P  CS S               
Sbjct: 634 GMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPG-CSISTIEIDKISHVVDTIA 692

Query: 448 ----------W--LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVD 495
                     W  ++ G C          L +   ++    D   Y +LI        +D
Sbjct: 693 DGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSID 752

Query: 496 YAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFS 555
            A  L ++M   G+  + + Y SL Y   ++G+     ++ + +  + +      Y +  
Sbjct: 753 EAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLI 812

Query: 556 ASYAKDNEILDLF--WSHVVDRGLMSKHI 582
             Y K+ +  + F     +V+ G M + I
Sbjct: 813 DEYCKEGKTTEAFKLKQKMVEEGYMEEAI 841


>gi|410109927|gb|AFV61043.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           javanica]
          Length = 431

 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 129/428 (30%), Positives = 225/428 (52%), Gaps = 4/428 (0%)

Query: 62  AFFKWAES-AVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS-VLNAL 119
           +FF W  S A   ++H+L S+ TMIH L  ++ F  A+++++ +  R    + S V  A+
Sbjct: 2   SFFTWLSSPANSTFRHTLHSYCTMIHFLCTHQMFSEAKSLIQVVVSRKGKGSASAVFAAI 61

Query: 120 VKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDR 179
           ++       + +V S L+  Y      +D ++ +   R H L      C  +L  L K R
Sbjct: 62  LETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLR 121

Query: 180 LTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYN 239
              +VW  Y+++++ G  A+++ +N+L+H  CK  D+   + +   +    +R  + +YN
Sbjct: 122 YFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPXVXSYN 181

Query: 240 TLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--K 297
           TL+  Y + G   E   ++  M   G+ PD+ TY+ LI+G  +E  M +   LF ++  K
Sbjct: 182 TLMNGYIRLGXLDEGFRLKSAMXASGVQPDVYTYSVLINGLXKESXMDDXNELFDEMLXK 241

Query: 298 GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDA 357
           G  PN VT+TTLIDG+C+   ++ A+ + + M ++ + P  +TYN++   LCK+G +  A
Sbjct: 242 GLVPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQXLXPDFITYNTLXYGLCKKGDLNQA 301

Query: 358 NRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHG 417
           + L++EM+ K + PD  T  TLI+  CK GD  +A + + RM++  + LD   Y ALI G
Sbjct: 302 HGLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIXLDDVAYTALISG 361

Query: 418 FCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVD 477
            C+      A+++L  ML  G  P   +Y+ +++ +C K +     K L E    G    
Sbjct: 362 LCQEGRSXDAEKMLREMLSVGLKPDXGTYTMIINEFCKKGDVWKGXKXLKEMQRNGHVPX 421

Query: 478 VSVYRALI 485
           V  Y  L+
Sbjct: 422 VVTYNVLM 429



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 88/279 (31%), Positives = 141/279 (50%), Gaps = 2/279 (0%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           G    +  +N L+H FC++G +R A+ +F  I   G  P   +Y TL++GY R   L+E 
Sbjct: 137 GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPXVXSYNTLMNGYIRLGXLDEG 196

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            RL+  M A GV P V TY+ ++  L KE  + D N L +EM  K + P++VT  TLI+ 
Sbjct: 197 FRLKSAMXASGVQPDVYTYSVLINGLXKESXMDDXNELFDEMLXKGLVPNSVTFTTLIDG 256

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +CK G    AM++  +ML   L  D  TY  L +G CK  +++ A  L+  M   G  P 
Sbjct: 257 HCKNGRVDLAMEIYKQMLSQXLXPDFITYNTLXYGLCKKGDLNQAHGLIDEMSMKGLKPD 316

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ L+DG C + + +A  +     +   + +D   Y ALI   C++ +   A+++  
Sbjct: 317 KFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIXLDDVAYTALISGLCQEGRSXDAEKMLR 376

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
            M   G+  D   YT +   + + G+       L +M R
Sbjct: 377 EMLSVGLKPDXGTYTMIINEFCKKGDVWKGXKXLKEMQR 415



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 87/268 (32%), Positives = 138/268 (51%), Gaps = 2/268 (0%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           VFD +    L P + +   L+N   +    D  +++   M   GV  +++ Y+VLI+   
Sbjct: 164 VFDAITKWGLRPXVXSYNTLMNGYIRLGXLDEGFRLKSAMXASGVQPDVYTYSVLINGLX 223

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           K S +D   +L  EM  K +  +  T+ TLI  +CK G    A+ +  +M  + + PD +
Sbjct: 224 KESXMDDXNELFDEMLXKGLVPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQXLXPDFI 283

Query: 272 TYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           TYN+L +G C++G + +A  L  ++  KG  P+  TYTTLIDG C+  DL+ A   R+ M
Sbjct: 284 TYNTLXYGLCKKGDLNQAHGLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRM 343

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
             + +    V Y +++  LC+EGR  DA ++L EM    + PD  T   +IN +CK GD 
Sbjct: 344 IQENIXLDDVAYTALISGLCQEGRSXDAEKMLREMLSVGLKPDXGTYTMIINEFCKKGDV 403

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHG 417
               K    M   G +    TY  L++G
Sbjct: 404 WKGXKXLKEMQRNGHVPXVVTYNVLMNG 431



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 86/341 (25%), Positives = 149/341 (43%), Gaps = 39/341 (11%)

Query: 232 RADLFTYNTLIALYCKKGMHYEALA-VQDRMEREGISP-----------------DIVTY 273
           R  L +Y T+I   C   M  EA + +Q  + R+G                    DI  +
Sbjct: 16  RHTLHSYCTMIHFLCTHQMFSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVF 75

Query: 274 NSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKG 333
           + LI  +   G +R+A   +R     T  H  +       CR   LE  ++LR      G
Sbjct: 76  SGLITAYLESGFLRDAIECYR----LTREHKLWVPF--DTCR-KVLEHLMKLRYFKLVWG 128

Query: 334 VYPGVVT---------YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
            Y  ++          +N ++ + CK+G IR A  + + + +  + P   + NTL+N Y 
Sbjct: 129 FYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPXVXSYNTLMNGYI 188

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           ++G      ++K+ M  +G+  D +TY  LI+G  K   MD   EL   ML  G  P+  
Sbjct: 189 RLGXLDEGFRLKSAMXASGVQPDVYTYSVLINGLXKESXMDDXNELFDEMLXKGLVPNSV 248

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
           +++ L+DG+C     +  +++  + +S+ L  D   Y  L    CKK  ++ A  L + M
Sbjct: 249 TFTTLIDGHCKNGRVDLAMEIYKQMLSQXLXPDFITYNTLXYGLCKKGDLNQAHGLIDEM 308

Query: 505 QGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
              G+  D   YT+L     + G+  A  +     +R+R++
Sbjct: 309 SMKGLKPDKFTYTTLIDGCCKEGDLDAAFE-----HRKRMI 344



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 82/321 (25%), Positives = 136/321 (42%), Gaps = 24/321 (7%)

Query: 232 RADLFTYNTLIALYCKKGMHYEALAVQDRMEREG---ISPDI----------VTYNSLIH 278
           R+D++ ++ LI  Y + G   +A+    R+ RE    +  D           + Y  L+ 
Sbjct: 69  RSDIYVFSGLITAYLESGFLRDAIECY-RLTREHKLWVPFDTCRKVLEHLMKLRYFKLVW 127

Query: 279 GFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGV 338
           GF  E  + E         G   +   +  L+  +C+  D+  A  + + +   G+ P V
Sbjct: 128 GFYEE--ILEC--------GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPXV 177

Query: 339 VTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNR 398
            +YN+++    + G + +  RL + M    + PD  T + LIN   K        ++ + 
Sbjct: 178 XSYNTLMNGYIRLGXLDEGFRLKSAMXASGVQPDVYTYSVLINGLXKESXMDDXNELFDE 237

Query: 399 MLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNN 458
           ML  GL+ +  T+  LI G CK   +D+A E+   ML     P + +Y+ L  G C K +
Sbjct: 238 MLXKGLVPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQXLXPDFITYNTLXYGLCKKGD 297

Query: 459 EEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTS 518
                 L+DE   +GL  D   Y  LI   CK+  +D A      M    I  D V YT+
Sbjct: 298 LNQAHGLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIXLDDVAYTA 357

Query: 519 LAYAYWRAGEPKACSDILDDM 539
           L     + G       +L +M
Sbjct: 358 LISGLCQEGRSXDAEKMLREM 378


>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
 gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
          Length = 1320

 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 129/387 (33%), Positives = 210/387 (54%), Gaps = 2/387 (0%)

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
           D V K+  ++   G+  + ++YN +I   CK+ +V + E+LL  M    V  D   Y T+
Sbjct: 294 DKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTV 353

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGA 299
           I+ +CK G    A  + D M R+ I PDIVTY S+IHG C+ G+M EAR +F +  +KG 
Sbjct: 354 ISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGL 413

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
            P+ VTYT LIDGYC+A +++EA  +   M  KG+ P VVTY ++   LCK G I  AN 
Sbjct: 414 EPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANE 473

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
           LL+EM+ K + P+  T NT++N  CKIG+    +K+   M  AG   D  TY  L+  +C
Sbjct: 474 LLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYC 533

Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
           K  EM  A ELL  ML+    P+  +++ L++G+C     E   +L++  + +G+  + +
Sbjct: 534 KMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNAT 593

Query: 480 VYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
            + +L++++C K  +     ++  M   G++ DS  Y  L   + +A   K    +  +M
Sbjct: 594 TFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEM 653

Query: 540 YRRRLMITLKIYRSFSASYAKDNEILD 566
             +   +T   Y +    + K  + ++
Sbjct: 654 VEKGYSVTAATYDALIRGFYKRKKFVE 680



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 118/391 (30%), Positives = 198/391 (50%), Gaps = 2/391 (0%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           Q+   MR   + P     T +++   K        K++ +M +  +V +I  Y  +IH  
Sbjct: 333 QLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGI 392

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           CKS  + +  ++  EM  K +  D  TY  LI  YCK G   EA +V ++M ++G++P++
Sbjct: 393 CKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNV 452

Query: 271 VTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
           VTY +L  G C+ G +  A  L  ++  KG  PN  TY T+++G C+  ++E+ ++L E 
Sbjct: 453 VTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEE 512

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M   G YP  +TY +++   CK G +  A+ LL  M  K++ P  VT N L+N +C  G 
Sbjct: 513 MDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGM 572

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
                ++   MLE G+M +  T+ +L+  +C    M    E+   M D G  P   +Y+ 
Sbjct: 573 LEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNI 632

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG 508
           L+ G+C   N +    L  E V +G  V  + Y ALIR F K++K   A++LF  M+ +G
Sbjct: 633 LIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHG 692

Query: 509 ILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
           ++ +  IY       +  G  +   ++ D+ 
Sbjct: 693 LVAEKDIYDIFVDVNYEEGNWEITLELCDEF 723



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 128/416 (30%), Positives = 210/416 (50%), Gaps = 3/416 (0%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           L++ D+++   L P  +    ++  L K+       ++ + M + GV  +  +Y  +I  
Sbjct: 297 LKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISG 356

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
            CK  +V    KL  EM  K +  D+ TY ++I   CK G   EA  + + M  +G+ PD
Sbjct: 357 FCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPD 416

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLRE 327
            VTY +LI G+C+ G M+EA  +   +  KG TPN VTYT L DG C+  +++ A  L  
Sbjct: 417 EVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLH 476

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
            M+ KG+ P V TYN+I+  LCK G I    +L+ EM+     PD +T  TL++AYCK+G
Sbjct: 477 EMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMG 536

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
           + A A ++   ML   L     T+  L++GFC +  ++  + L+  ML+ G  P+  +++
Sbjct: 537 EMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFN 596

Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGN 507
            L+  YC KNN  A  ++      RG+  D + Y  LI+  CK   +  A  L   M   
Sbjct: 597 SLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEK 656

Query: 508 GILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSF-SASYAKDN 562
           G    +  Y +L   +++  +      + ++M +  L+    IY  F   +Y + N
Sbjct: 657 GYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFVDVNYEEGN 712



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 101/327 (30%), Positives = 168/327 (51%), Gaps = 2/327 (0%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           +  ++F++M V  L P     T L++   K       + V+ +MVQ G+  N+  Y  L 
Sbjct: 400 EAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALA 459

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
              CK+ ++D   +LL EM  K ++ +++TYNT++   CK G   + + + + M+  G  
Sbjct: 460 DGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFY 519

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
           PD +TY +L+  +C+ G M +A  L R +  K   P  VT+  L++G+C +  LE+  RL
Sbjct: 520 PDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERL 579

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
            E M  KG+ P   T+NS++++ C +  +R    +   M+++ + PD+ T N LI  +CK
Sbjct: 580 IEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCK 639

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
             +   A  +   M+E G  +   TY ALI GF K K+   A++L   M   G       
Sbjct: 640 ARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDI 699

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSR 472
           Y   VD    + N E  L+L DEF++ 
Sbjct: 700 YDIFVDVNYEEGNWEITLELCDEFMTE 726



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 129/251 (51%)

Query: 314 CRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDN 373
           C    ++ A+++ E     GV    V+ N +L  LC+ G++R+A+ LL +M ++   PD 
Sbjct: 218 CNFEGIKIAVKVFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDV 277

Query: 374 VTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFG 433
           V+   +++ YC+IG+    +K+ + +   GL  D++ Y  +I   CK  E+  A++LL G
Sbjct: 278 VSYGVVVSGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRG 337

Query: 434 MLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEK 493
           M   G  P    Y+ ++ G+C   N  A  KL DE   + +  D+  Y ++I   CK  K
Sbjct: 338 MRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGK 397

Query: 494 VDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRS 553
           +  A+ +FN M   G+  D V YT+L   Y +AGE K    + + M ++ L   +  Y +
Sbjct: 398 MVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTA 457

Query: 554 FSASYAKDNEI 564
            +    K+ EI
Sbjct: 458 LADGLCKNGEI 468


>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
 gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
          Length = 939

 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 151/549 (27%), Positives = 266/549 (48%), Gaps = 21/549 (3%)

Query: 34  IASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKH 93
           +  +L   A+ +V L+       P  +   F+ A S     + SL SH  ++HIL + + 
Sbjct: 68  LTPALLQAALRRVRLD-------PDAALHLFRLAPS-----RPSLVSHAQLLHILARARR 115

Query: 94  FKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVF 153
           F  A+ +L  +          +   L +++ D   ++     L+  +A+       L VF
Sbjct: 116 FHDARALLSSLPPH----AEPLFPHLAEVYRDFTFSAVSFDLLLRAHADAGQLSSALNVF 171

Query: 154 DQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKS 213
           D M      P L +C  LLN L +     M   VY +M   GV+ +     ++  A C+ 
Sbjct: 172 DGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRD 231

Query: 214 SDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTY 273
             V +  + + EME   +  +L  Y+ ++  YC  G   +A  + + ++R+G+SP++VTY
Sbjct: 232 GRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTY 291

Query: 274 NSLIHGFCREGRMREARRLFRDIKGATP---NHVTYTTLIDGYCRANDLEEALRLREVMA 330
             L+ G+C++GRM EA R+ +++K       + V Y  +I+GYC+   +++A R+R  M 
Sbjct: 292 TLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMR 351

Query: 331 AKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTA 390
             G++  +  YN+++  LCK GR+ +  ++L EM +  + PD  + NTLI+ YC+ G   
Sbjct: 352 DAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMR 411

Query: 391 SAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLV 450
            A ++   M+  GL     TY  L+ GFC    +D A  L F ML  G +P+  S S L+
Sbjct: 412 KAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLL 471

Query: 451 DGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGIL 510
           DG       E  L L  E ++RGL  +V  +  +I   CK  ++  A+ L + M+     
Sbjct: 472 DGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCP 531

Query: 511 GDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASY--AKDNEILDLF 568
            DS+ Y +L   Y + G+    + +++ M       +++++ SF   +  AK    ++  
Sbjct: 532 PDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDI 591

Query: 569 WSHVVDRGL 577
            S +  RGL
Sbjct: 592 HSEMSARGL 600



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 128/438 (29%), Positives = 221/438 (50%), Gaps = 14/438 (3%)

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG-VVA 198
           Y  +  T+D  ++ + ++   L P++   T+L+    KD   +   +V K+M + G +V 
Sbjct: 263 YCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVV 322

Query: 199 NIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQ 258
           +   Y ++I+  C+   +D   ++  EM    +  +LF YNT+I   CK G   E   V 
Sbjct: 323 DEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVL 382

Query: 259 DRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRA 316
             ME  G+ PD  +YN+LI G+CREG MR+A  + R +   G     +TY TL+ G+C  
Sbjct: 383 QEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSL 442

Query: 317 NDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTC 376
           + +++ALRL  +M  +GV P  ++ +++L  L K G+   A  L  E   + +A + +T 
Sbjct: 443 HAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITF 502

Query: 377 NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD 436
           NT+IN  CKIG  A A ++ +RM E     D  TY+ L  G+CK  ++  A  L+  M  
Sbjct: 503 NTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEH 562

Query: 437 AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDY 496
            GF+PS   ++  + G+        +  +  E  +RGL  ++  Y ALI  +CK+  +  
Sbjct: 563 LGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHE 622

Query: 497 AQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSA 556
           A  L+  M  NG+  +  I ++L   +++ G+    + +L        ++ + +    S 
Sbjct: 623 ACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQK------LVNIDMIPGCSI 676

Query: 557 SYAKDNEILDLFWSHVVD 574
           S  + ++I     SHVVD
Sbjct: 677 STIEIDKI-----SHVVD 689



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 123/471 (26%), Positives = 211/471 (44%), Gaps = 63/471 (13%)

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
           + +L    D L+++  M    + P+  +C+ LL+ L K   T+    ++K+ +  G+  N
Sbjct: 439 FCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKN 498

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
           +  +N +I+  CK   + + E+LL  M+      D  TY TL   YCK G    A  + +
Sbjct: 499 VITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMN 558

Query: 260 RMER-----------------------------------EGISPDIVTYNSLIHGFCREG 284
           +ME                                     G+SP++VTY +LI G+C+EG
Sbjct: 559 KMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEG 618

Query: 285 RMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGV---- 338
            + EA  L+ ++   G  PN    + L+  + +   ++EA  + + +    + PG     
Sbjct: 619 NLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSIST 678

Query: 339 ----------------------VTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTC 376
                                 V +N I+  LCK GRI DA  L   +  K+  PDN T 
Sbjct: 679 IEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTY 738

Query: 377 NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD 436
           ++LI+     G    A  +++ ML AGL  +  TY +LI+G CK+ ++  A  L   +  
Sbjct: 739 SSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQS 798

Query: 437 AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDY 496
            G SP+  +Y+ L+D YC +       KL  + V  G+   V  Y  LI   C +  ++ 
Sbjct: 799 KGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEE 858

Query: 497 AQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMIT 547
           A +L + M  N +  + + Y +L + Y ++G  +  S + D+M+ R L+ T
Sbjct: 859 AIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLPT 909



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 123/443 (27%), Positives = 205/443 (46%), Gaps = 57/443 (12%)

Query: 66  WAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDD 125
           W E+       ++ +  T+I+ L K      A+ +L+++                ++   
Sbjct: 487 WKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMK---------------ELRCP 531

Query: 126 PDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHL-HACTV-LLNSLAKDRLTDM 183
           PD     L++  +F    K+ Q G        + N M HL  A +V + NS         
Sbjct: 532 PDS----LTYRTLFDGYCKLGQLGTAT----HLMNKMEHLGFAPSVEMFNSFITGHFIAK 583

Query: 184 VW----KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYN 239
            W     ++ +M   G+  N+  Y  LI   CK  ++ +   L  EM    +  ++F  +
Sbjct: 584 QWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICS 643

Query: 240 TLIALYCKKGMHYEALAVQDRMEREGISPDI--------------------------VTY 273
            L++ + K+G   EA  V  ++    + P                            V +
Sbjct: 644 ALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMW 703

Query: 274 NSLIHGFCREGRMREARRLFRDIKGAT--PNHVTYTTLIDGYCRANDLEEALRLREVMAA 331
           N +I G C+ GR+ +A+ LF  ++     P++ TY++LI G   +  ++EA  LR+VM +
Sbjct: 704 NVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLS 763

Query: 332 KGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTAS 391
            G+ P ++TYNS++  LCK G++  A  L N++  K I+P+ +T NTLI+ YCK G T  
Sbjct: 764 AGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTE 823

Query: 392 AMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVD 451
           A K+K +M+E G+     TY  LI+G C    M+ A +LL  M++    P+Y +Y  L+ 
Sbjct: 824 AFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLIH 883

Query: 452 GYCNKNNEEALLKLLDEFVSRGL 474
           GY    N E + KL DE   RGL
Sbjct: 884 GYIKSGNMEEISKLYDEMHIRGL 906



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 83/305 (27%), Positives = 154/305 (50%), Gaps = 13/305 (4%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
            +   ++ +M  + + P++  C+ L++   K+   D    V +K+V + ++    +  + 
Sbjct: 621 HEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTI- 679

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
                   ++DK+  ++  +   +  +    +N +I   CK G   +A ++ + +  +  
Sbjct: 680 --------EIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRF 731

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI---KGATPNHVTYTTLIDGYCRANDLEEAL 323
            PD  TY+SLIHG    G + EA  L RD+    G TPN +TY +LI G C++  L  A+
Sbjct: 732 LPDNFTYSSLIHGCAASGSIDEAFSL-RDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAV 790

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
            L   + +KG+ P  +TYN+++ + CKEG+  +A +L  +M E+ I P  +T + LI   
Sbjct: 791 NLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGL 850

Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY 443
           C  G    A+K+ ++M+E  +  +  TY  LIHG+ K+  M+   +L   M   G  P+ 
Sbjct: 851 CTQGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLPTN 910

Query: 444 CSYSW 448
              +W
Sbjct: 911 WIGNW 915


>gi|410109935|gb|AFV61047.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           origanoides]
          Length = 431

 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 128/428 (29%), Positives = 229/428 (53%), Gaps = 4/428 (0%)

Query: 62  AFFKWAES-AVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS-VLNAL 119
           +FF W  S A   ++H+L S+ TMIH L  ++ F  A+++++ +  R    + S V  A+
Sbjct: 2   SFFTWLSSPANSTFRHTLHSYCTMIHFLCTHQMFSEAKSLIQVVVSRKGKGSASXVFAAI 61

Query: 120 VKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDR 179
           ++       + +V S L+  Y      +D ++ +   R H L      C  +L  L K +
Sbjct: 62  LETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEYLMKLK 121

Query: 180 LTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYN 239
              +VW  Y+++++ G  A+++ +N+L+H  CK  D+   + +   +    +R  + + N
Sbjct: 122 YFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSXN 181

Query: 240 TLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IK 297
           TL+  Y + G   E   ++  M   G+ PD+ TY+ LI+G C+E +M +A   F +  +K
Sbjct: 182 TLMNGYIRLGDLDEGFRLKSVMLASGVQPDVYTYSVLINGLCKESKMDDANEXFDEMLVK 241

Query: 298 GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDA 357
           G  PN VT+TTLIDG+C+   ++ A  + + M ++ + P ++TYN+++  LCK+G ++ A
Sbjct: 242 GLVPNGVTFTTLIDGHCKNGRVDLAKEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQA 301

Query: 358 NRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHG 417
           + L+++M+ K + PD +T  TLIB  CK GD  SA + + RM++  + LD   Y ALI G
Sbjct: 302 HDLIDDMSMKGLKPDKITYTTLIBGCCKEGDLDSAFEHRKRMIQENIRLDDVVYTALISG 361

Query: 418 FCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVD 477
            C+      A+++L  ML     P   +Y+ +++ +C K +     KLL E    G    
Sbjct: 362 LCQEGRSVDAEKMLREMLSVRLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHAPS 421

Query: 478 VSVYRALI 485
           V  Y  L+
Sbjct: 422 VVTYNVLM 429



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 90/279 (32%), Positives = 149/279 (53%), Gaps = 2/279 (0%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           G    +  +N L+H FC++G +R A+ +F  I   G  P+ V+  TL++GY R  DL+E 
Sbjct: 137 GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSXNTLMNGYIRLGDLDEG 196

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            RL+ VM A GV P V TY+ ++  LCKE ++ DAN   +EM  K + P+ VT  TLI+ 
Sbjct: 197 FRLKSVMLASGVQPDVYTYSVLINGLCKESKMDDANEXFDEMLVKGLVPNGVTFTTLIDG 256

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +CK G    A ++  +ML   L+ D  TY  LI+G CK  ++  A +L+  M   G  P 
Sbjct: 257 HCKNGRVDLAKEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSMKGLKPD 316

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ L+BG C + + ++  +     +   + +D  VY ALI   C++ +   A+++  
Sbjct: 317 KITYTTLIBGCCKEGDLDSAFEHRKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLR 376

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
            M    +  D+  YT +   + + G+    S +L +M R
Sbjct: 377 EMLSVRLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQR 415



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 90/362 (24%), Positives = 161/362 (44%), Gaps = 34/362 (9%)

Query: 232 RADLFTYNTLIALYCKKGMHYEALA-VQDRMEREGISP-----------------DIVTY 273
           R  L +Y T+I   C   M  EA + +Q  + R+G                    DI  +
Sbjct: 16  RHTLHSYCTMIHFLCTHQMFSEAKSLIQVVVSRKGKGSASXVFAAILETKGTQRSDIYVF 75

Query: 274 NSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKG 333
           + LI  +   G +R+A   +R     T  H  +       CR   LE  ++L+      G
Sbjct: 76  SGLITAYLESGFLRDAIECYR----LTREHKLWVPF--DTCRKV-LEYLMKLKYFKLVWG 128

Query: 334 VYPGVVT---------YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
            Y  ++          +N ++ + CK+G IR A  + + + +  + P  V+ NTL+N Y 
Sbjct: 129 FYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSXNTLMNGYI 188

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           ++GD     ++K+ ML +G+  D +TY  LI+G CK  +MD A E    ML  G  P+  
Sbjct: 189 RLGDLDEGFRLKSVMLASGVQPDVYTYSVLINGLCKESKMDDANEXFDEMLVKGLVPNGV 248

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
           +++ L+DG+C     +   ++  + +S+ L  D+  Y  LI   CKK  +  A  L + M
Sbjct: 249 TFTTLIDGHCKNGRVDLAKEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDM 308

Query: 505 QGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
              G+  D + YT+L     + G+  +  +    M +  + +   +Y +  +   ++   
Sbjct: 309 SMKGLKPDKITYTTLIBGCCKEGDLDSAFEHRKRMIQENIRLDDVVYTALISGLCQEGRS 368

Query: 565 LD 566
           +D
Sbjct: 369 VD 370



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 88/346 (25%), Positives = 147/346 (42%), Gaps = 24/346 (6%)

Query: 232 RADLFTYNTLIALYCKKGMHYEALAVQDRMEREG---ISPDI----------VTYNSLIH 278
           R+D++ ++ LI  Y + G   +A+    R+ RE    +  D           + Y  L+ 
Sbjct: 69  RSDIYVFSGLITAYLESGFLRDAIECY-RLTREHKLWVPFDTCRKVLEYLMKLKYFKLVW 127

Query: 279 GFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGV 338
           GF  E  + E         G   +   +  L+  +C+  D+  A  + + +   G+ P V
Sbjct: 128 GFYEE--ILEC--------GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSV 177

Query: 339 VTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNR 398
           V+ N+++    + G + +  RL + M    + PD  T + LIN  CK      A +  + 
Sbjct: 178 VSXNTLMNGYIRLGDLDEGFRLKSVMLASGVQPDVYTYSVLINGLCKESKMDDANEXFDE 237

Query: 399 MLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNN 458
           ML  GL+ +  T+  LI G CK   +D+AKE+   ML     P   +Y+ L+ G C K +
Sbjct: 238 MLVKGLVPNGVTFTTLIDGHCKNGRVDLAKEIYKQMLSQSLLPDLITYNTLIYGLCKKGD 297

Query: 459 EEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTS 518
            +    L+D+   +GL  D   Y  LI   CK+  +D A      M    I  D V+YT+
Sbjct: 298 LKQAHDLIDDMSMKGLKPDKITYTTLIBGCCKEGDLDSAFEHRKRMIQENIRLDDVVYTA 357

Query: 519 LAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
           L     + G       +L +M   RL      Y      + K  ++
Sbjct: 358 LISGLCQEGRSVDAEKMLREMLSVRLKPDTGTYTMIINEFCKKGDV 403



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 69/139 (49%), Gaps = 3/139 (2%)

Query: 141 ANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANI 200
            +LK   D   + D M +  L P     T L+B   K+   D  ++  K+M+Q  +  + 
Sbjct: 296 GDLKQAHD---LIDDMSMKGLKPDKITYTTLIBGCCKEGDLDSAFEHRKRMIQENIRLDD 352

Query: 201 HLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDR 260
            +Y  LI   C+       EK+L EM    ++ D  TY  +I  +CKKG  ++   +   
Sbjct: 353 VVYTALISGLCQEGRSVDAEKMLREMLSVRLKPDTGTYTMIINEFCKKGDVWKGSKLLKE 412

Query: 261 MEREGISPDIVTYNSLIHG 279
           M+R+G +P +VTYN L++G
Sbjct: 413 MQRDGHAPSVVTYNVLMNG 431


>gi|255660842|gb|ACU25590.1| pentatricopeptide repeat-containing protein [Priva cordifolia]
          Length = 418

 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 123/404 (30%), Positives = 220/404 (54%), Gaps = 3/404 (0%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS-VLNALVKIHDDPDGNSH 131
            ++H+L S+ TMIH L  ++    A+++++ I  R    + S V  A+++       + +
Sbjct: 8   TFRHTLHSYCTMIHFLCTHQMLPEAKSLIQVIVSRKGKDSASAVFAAILETKGTQRSDIY 67

Query: 132 VLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKM 191
           V S L+  Y      +D L+ F   R H        C  +L+ L K +   +VW  YK++
Sbjct: 68  VFSGLITAYLESGFLRDALECFRLSREHKFWVPFDTCRKVLDHLMKLKYFKLVWGFYKEI 127

Query: 192 VQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMH 251
           ++ G  A+++ +N+L+H  CK  ++   + +   +    ++  + ++NTL+  Y K G+ 
Sbjct: 128 LECGYPASLYFFNILMHRFCKEGEIRLAQLVFDAITKWGLKPSVVSFNTLMNGYIKMGIL 187

Query: 252 YEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTL 309
            E   +++ M   G  PD+ TY+ LI+G C+E +M EA  LF ++  KG  PN VT+TTL
Sbjct: 188 DEGFRLKNAMHASGAQPDVYTYSVLINGLCKESKMDEAHELFDEMLEKGLVPNGVTFTTL 247

Query: 310 IDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI 369
           IDG+C+   L+ A+ + + + ++G+ P ++TYN+++   CK+G ++    L++EM+ K +
Sbjct: 248 IDGHCKNGKLDLAMEIYKQILSQGLSPDLITYNTLIYGFCKKGDLKQTRDLIDEMSMKGL 307

Query: 370 APDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKE 429
            PD +T  TLI+  CK GD  +A + + +M+E  + LD   Y ALI G CK      A++
Sbjct: 308 KPDKITYTTLIDGSCKEGDLETAFEYRKKMIEENIRLDDVVYTALISGLCKEGRSVDAEK 367

Query: 430 LLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
           +L  ML  G  P   +Y+ +++ +C   +     KLL E    G
Sbjct: 368 MLREMLSVGLKPDSGTYTIVMNEFCKNGDVNTGSKLLKEMQRDG 411



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 93/279 (33%), Positives = 152/279 (54%), Gaps = 2/279 (0%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           G    +  +N L+H FC+EG +R A+ +F  I   G  P+ V++ TL++GY +   L+E 
Sbjct: 131 GYPASLYFFNILMHRFCKEGEIRLAQLVFDAITKWGLKPSVVSFNTLMNGYIKMGILDEG 190

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            RL+  M A G  P V TY+ ++  LCKE ++ +A+ L +EM EK + P+ VT  TLI+ 
Sbjct: 191 FRLKNAMHASGAQPDVYTYSVLINGLCKESKMDEAHELFDEMLEKGLVPNGVTFTTLIDG 250

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +CK G    AM++  ++L  GL  D  TY  LI+GFCK  ++   ++L+  M   G  P 
Sbjct: 251 HCKNGKLDLAMEIYKQILSQGLSPDLITYNTLIYGFCKKGDLKQTRDLIDEMSMKGLKPD 310

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ L+DG C + + E   +   + +   + +D  VY ALI   CK+ +   A+++  
Sbjct: 311 KITYTTLIDGSCKEGDLETAFEYRKKMIEENIRLDDVVYTALISGLCKEGRSVDAEKMLR 370

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
            M   G+  DS  YT +   + + G+    S +L +M R
Sbjct: 371 EMLSVGLKPDSGTYTIVMNEFCKNGDVNTGSKLLKEMQR 409



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 94/362 (25%), Positives = 163/362 (45%), Gaps = 34/362 (9%)

Query: 232 RADLFTYNTLIALYCKKGMHYEALA-VQDRMEREGISP-----------------DIVTY 273
           R  L +Y T+I   C   M  EA + +Q  + R+G                    DI  +
Sbjct: 10  RHTLHSYCTMIHFLCTHQMLPEAKSLIQVIVSRKGKDSASAVFAAILETKGTQRSDIYVF 69

Query: 274 NSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKG 333
           + LI  +   G +R+A   FR +       V + T     CR   L+  ++L+      G
Sbjct: 70  SGLITAYLESGFLRDALECFR-LSREHKFWVPFDT-----CRKV-LDHLMKLKYFKLVWG 122

Query: 334 VYPGVVT---------YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
            Y  ++          +N ++ + CKEG IR A  + + + +  + P  V+ NTL+N Y 
Sbjct: 123 FYKEILECGYPASLYFFNILMHRFCKEGEIRLAQLVFDAITKWGLKPSVVSFNTLMNGYI 182

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           K+G      ++KN M  +G   D +TY  LI+G CK  +MD A EL   ML+ G  P+  
Sbjct: 183 KMGILDEGFRLKNAMHASGAQPDVYTYSVLINGLCKESKMDEAHELFDEMLEKGLVPNGV 242

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
           +++ L+DG+C     +  +++  + +S+GL  D+  Y  LI  FCKK  +   + L + M
Sbjct: 243 TFTTLIDGHCKNGKLDLAMEIYKQILSQGLSPDLITYNTLIYGFCKKGDLKQTRDLIDEM 302

Query: 505 QGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
              G+  D + YT+L     + G+ +   +    M    + +   +Y +  +   K+   
Sbjct: 303 SMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKKMIEENIRLDDVVYTALISGLCKEGRS 362

Query: 565 LD 566
           +D
Sbjct: 363 VD 364



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 68/238 (28%), Positives = 120/238 (50%), Gaps = 2/238 (0%)

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
           Y  + +  +G ++ + M      P ++  +VL+N L K+   D   +++ +M++ G+V N
Sbjct: 181 YIKMGILDEGFRLKNAMHASGAQPDVYTYSVLINGLCKESKMDEAHELFDEMLEKGLVPN 240

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
              +  LI   CK+  +D   ++  ++  + +  DL TYNTLI  +CKKG   +   + D
Sbjct: 241 GVTFTTLIDGHCKNGKLDLAMEIYKQILSQGLSPDLITYNTLIYGFCKKGDLKQTRDLID 300

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRAN 317
            M  +G+ PD +TY +LI G C+EG +  A    + +  +    + V YT LI G C+  
Sbjct: 301 EMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKKMIEENIRLDDVVYTALISGLCKEG 360

Query: 318 DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVT 375
              +A ++   M + G+ P   TY  ++ + CK G +   ++LL EM      P  VT
Sbjct: 361 RSVDAEKMLREMLSVGLKPDSGTYTIVMNEFCKNGDVNTGSKLLKEMQRDGHVPSVVT 418


>gi|255660846|gb|ACU25592.1| pentatricopeptide repeat-containing protein [Tamonea boxiana]
          Length = 418

 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 122/404 (30%), Positives = 221/404 (54%), Gaps = 3/404 (0%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS-VLNALVKIHDDPDGNSH 131
            ++H+L ++ TMIH L  ++    A+++++ +  R    + S V  A+++       + +
Sbjct: 8   TFRHTLHTYCTMIHFLCTHQMLLEAKSLIQIVVSRKGKDSASAVFAAILETKGTQRSDIY 67

Query: 132 VLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKM 191
           V S L+  Y      +D ++ F   R H L      C  +L  L K +   +VW  YK++
Sbjct: 68  VFSGLINAYLESGFVRDAIECFRLTREHKLRVPFDTCRKVLEHLMKLKYFKLVWGFYKEI 127

Query: 192 VQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMH 251
           ++ G  A+++ +N+L+H  CK  ++   + +   +    +R  + ++NTL+  Y + G  
Sbjct: 128 LECGYPASLYFFNILMHRFCKEGEIWIAQSVFDSITKWGLRPSVVSFNTLMNGYIRLGDL 187

Query: 252 YEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTL 309
            +   +++ M   G+ PD+ TY+ LI+G C+E +M EA  LF ++  KG  PN VT+TTL
Sbjct: 188 DQGFKLKNAMHASGVQPDVYTYSVLINGLCKESKMNEANDLFNEMLDKGLVPNGVTFTTL 247

Query: 310 IDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI 369
           IDG+C+   ++ A+   + M ++   P ++TYN+++  LCK+G ++ A  LL+EM  K +
Sbjct: 248 IDGHCKNGKVDSAMETYKQMLSQCFLPDLITYNTLIYGLCKKGDLKQAQDLLDEMRMKGL 307

Query: 370 APDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKE 429
            PD +T  TLI+  CK GD  SA +++  M++  + LD   Y ALI G C+      A++
Sbjct: 308 KPDKITYTTLIDGNCKEGDLDSAFELRETMVKESIRLDDVAYTALISGLCQEGRATDAEK 367

Query: 430 LLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
           +L  ML  G  P   +Y+ +++ +C K + +   KLL E   +G
Sbjct: 368 MLREMLSVGLKPDNGTYTMIINEFCKKEDVKTAAKLLKEMQRQG 411



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 92/280 (32%), Positives = 154/280 (55%), Gaps = 2/280 (0%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           G    +  +N L+H FC+EG +  A+ +F  I   G  P+ V++ TL++GY R  DL++ 
Sbjct: 131 GYPASLYFFNILMHRFCKEGEIWIAQSVFDSITKWGLRPSVVSFNTLMNGYIRLGDLDQG 190

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            +L+  M A GV P V TY+ ++  LCKE ++ +AN L NEM +K + P+ VT  TLI+ 
Sbjct: 191 FKLKNAMHASGVQPDVYTYSVLINGLCKESKMNEANDLFNEMLDKGLVPNGVTFTTLIDG 250

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +CK G   SAM+   +ML    + D  TY  LI+G CK  ++  A++LL  M   G  P 
Sbjct: 251 HCKNGKVDSAMETYKQMLSQCFLPDLITYNTLIYGLCKKGDLKQAQDLLDEMRMKGLKPD 310

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ L+DG C + + ++  +L +  V   + +D   Y ALI   C++ +   A+++  
Sbjct: 311 KITYTTLIDGNCKEGDLDSAFELRETMVKESIRLDDVAYTALISGLCQEGRATDAEKMLR 370

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRR 542
            M   G+  D+  YT +   + +  + K  + +L +M R+
Sbjct: 371 EMLSVGLKPDNGTYTMIINEFCKKEDVKTAAKLLKEMQRQ 410



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 95/365 (26%), Positives = 166/365 (45%), Gaps = 40/365 (10%)

Query: 232 RADLFTYNTLIALYCKKGMHYEALA-VQDRMEREGISP-----------------DIVTY 273
           R  L TY T+I   C   M  EA + +Q  + R+G                    DI  +
Sbjct: 10  RHTLHTYCTMIHFLCTHQMLLEAKSLIQIVVSRKGKDSASAVFAAILETKGTQRSDIYVF 69

Query: 274 NSLIHGFCREGRMREARRLFRDIKGATPNH---VTYTTLIDGYCRANDLEEALRLREVMA 330
           + LI+ +   G +R+A   FR     T  H   V + T     CR   LE  ++L+    
Sbjct: 70  SGLINAYLESGFVRDAIECFR----LTREHKLRVPFDT-----CRKV-LEHLMKLKYFKL 119

Query: 331 AKGVYPGVVT---------YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
             G Y  ++          +N ++ + CKEG I  A  + + + +  + P  V+ NTL+N
Sbjct: 120 VWGFYKEILECGYPASLYFFNILMHRFCKEGEIWIAQSVFDSITKWGLRPSVVSFNTLMN 179

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
            Y ++GD     K+KN M  +G+  D +TY  LI+G CK  +M+ A +L   MLD G  P
Sbjct: 180 GYIRLGDLDQGFKLKNAMHASGVQPDVYTYSVLINGLCKESKMNEANDLFNEMLDKGLVP 239

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
           +  +++ L+DG+C     ++ ++   + +S+    D+  Y  LI   CKK  +  AQ L 
Sbjct: 240 NGVTFTTLIDGHCKNGKVDSAMETYKQMLSQCFLPDLITYNTLIYGLCKKGDLKQAQDLL 299

Query: 502 NLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKD 561
           + M+  G+  D + YT+L     + G+  +  ++ + M +  + +    Y +  +   ++
Sbjct: 300 DEMRMKGLKPDKITYTTLIDGNCKEGDLDSAFELRETMVKESIRLDDVAYTALISGLCQE 359

Query: 562 NEILD 566
               D
Sbjct: 360 GRATD 364



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 78/241 (32%), Positives = 119/241 (49%), Gaps = 8/241 (3%)

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
           Y  L     G ++ + M    + P ++  +VL+N L K+   +    ++ +M+  G+V N
Sbjct: 181 YIRLGDLDQGFKLKNAMHASGVQPDVYTYSVLINGLCKESKMNEANDLFNEMLDKGLVPN 240

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
              +  LI   CK+  VD   +   +M  +    DL TYNTLI   CKKG   +A  + D
Sbjct: 241 GVTFTTLIDGHCKNGKVDSAMETYKQMLSQCFLPDLITYNTLIYGLCKKGDLKQAQDLLD 300

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYC--- 314
            M  +G+ PD +TY +LI G C+EG +  A  L   +  +    + V YT LI G C   
Sbjct: 301 EMRMKGLKPDKITYTTLIDGNCKEGDLDSAFELRETMVKESIRLDDVAYTALISGLCQEG 360

Query: 315 RANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNV 374
           RA D E+ LR    M + G+ P   TY  I+ + CK+  ++ A +LL EM  +   P  V
Sbjct: 361 RATDAEKMLR---EMLSVGLKPDNGTYTMIINEFCKKEDVKTAAKLLKEMQRQGHVPCVV 417

Query: 375 T 375
           T
Sbjct: 418 T 418


>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 179/597 (29%), Positives = 283/597 (47%), Gaps = 74/597 (12%)

Query: 32  PNIASSLTSTAIHKVLLNLYNCCHI-PSLSC-AFFKWAESAVPNYKHSLQSHWTMI---- 85
           P++ SSL S  +H +L N     HI  + SC  FF +       YK  L+++ T+I    
Sbjct: 50  PSLLSSLNSQTVHLILSN-----HILTAESCLDFFHFIRKNY--YKPDLRAYITLIFKLY 102

Query: 86  -----HILTKNKHFKSAQNMLEKIALRDFLSTP-SVLNALVKIHDDPDGNSH-------- 131
                  L K++ F   +++    A+ D L  P +V+ +LV   DD    S         
Sbjct: 103 RSRKSDKLHKSQKFAEIRHLFNCAAVDDGLRVPVTVIASLV---DDACNESKCNRAKFKE 159

Query: 132 -VLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKK 190
                L   YA+ KM  + L+ F+ M          +C V L +L +    D   + +++
Sbjct: 160 KFFDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRR 219

Query: 191 MVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK-- 248
           MV L V   ++   +++   CK  DV+   KL+ E+  K V+A++ TYN  I  Y K+  
Sbjct: 220 MVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLD 279

Query: 249 -GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVT 305
            G   E L +   ME+EG++ ++VTY  LIHGF   G++ EA+RLF ++  KG   +   
Sbjct: 280 LGGVAEILTL---MEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYV 336

Query: 306 YTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMN 365
           YT++I   CR+ +++ AL L + M  KG+ P   TY +++  +CK G++  A  L+NEM 
Sbjct: 337 YTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQ 396

Query: 366 EKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMD 425
            K I  + V  NTLI+ YC+ G    A++++  M + GL  D F Y ++  G CK    D
Sbjct: 397 GKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKD 456

Query: 426 IAKELLFGMLDAGFSPS----------YC-------------------------SYSWLV 450
            AK LLF M++ G SP+          YC                         +Y+ L+
Sbjct: 457 EAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLI 516

Query: 451 DGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGIL 510
           DGY  + N +   KL DE  +RGL  DV    +LI   C   KVD A +LF+ M   G++
Sbjct: 517 DGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLV 576

Query: 511 GDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDL 567
            + V YT++     + G  +    + D+M    L     +Y S   S    +E + +
Sbjct: 577 PNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSLHSADESISM 633


>gi|357509511|ref|XP_003625044.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355500059|gb|AES81262.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 521

 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 142/468 (30%), Positives = 253/468 (54%), Gaps = 13/468 (2%)

Query: 10  DTKFIKTISAIMLKGHWAKLLNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAES 69
           D  FI    +  +   W KL  P  + +LT   I  +LL L N      LS  FF W ++
Sbjct: 40  DLDFINIFHSHFIHSQWEKL-TP-FSKTLTPFKIQHILLKLQNDA---VLSLKFFNWVQT 94

Query: 70  AVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGN 129
             PN  H+L +H  ++HILTKN++FK+AQ++  KI   +     S+L++    +  P   
Sbjct: 95  HNPN-SHTLHTHSFLLHILTKNRNFKTAQSIFSKIITTNSNLFESLLHSYTLCNSSP--- 150

Query: 130 SHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYK 189
             V   L   +A++   ++    F +M+ +   P + +C   L+S+   +  ++V   Y+
Sbjct: 151 -LVFDTLFKTFAHMNKLRNATDTFVKMKEYGFFPTVESCNAFLSSMLYLKRPELVVSFYR 209

Query: 190 KMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKG 249
           +M +  +  N++  N+++ A CK  +++K  ++L +M+   +  ++ T+N+LI+ YC KG
Sbjct: 210 QMRRNRISPNVYTINMVVSAYCKLGELNKASEVLEKMKDMGLCPNVVTFNSLISGYCDKG 269

Query: 250 MHYEALAVQD-RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGA--TPNHVTY 306
           +   AL V+D  M + G+ P++VT+N+LI+GFC+EG++ EA R+F ++K A   PN VTY
Sbjct: 270 LLGLALKVRDLMMGKNGVFPNVVTFNTLINGFCKEGKLHEANRVFSEMKLANVAPNVVTY 329

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
            TLI+G+ +A + E  + L E M    V   ++TYN ++  LCKEG+ + A  ++ E+++
Sbjct: 330 NTLINGFGQAGNSEMGIGLFEEMERNKVKADILTYNGLILGLCKEGKTKKAAYMVKELDK 389

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
             + P+  T + LI   C   ++  A  V   M+ +G   ++ T++ L   FCK ++ D 
Sbjct: 390 GNLVPNASTFSALIAGQCVRNNSERAFLVYRSMVRSGFSPNENTFRMLASAFCKNEDFDG 449

Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGL 474
           A ++L  ML+   +P     S +  G C    ++  L L  E  ++ L
Sbjct: 450 AVQVLRDMLERFMTPDSSILSEVYSGLCRCGRKQFALMLCSEIEAKRL 497



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 124/442 (28%), Positives = 210/442 (47%), Gaps = 32/442 (7%)

Query: 130 SHVLSWLVIFYANLKMTQDG---LQVFDQMRVHNLMPH-LHACTVLLNSLAKDRLTDMVW 185
           S  L+   I +  LK+  D    L+ F+ ++ HN   H LH  + LL+ L K+R      
Sbjct: 63  SKTLTPFKIQHILLKLQNDAVLSLKFFNWVQTHNPNSHTLHTHSFLLHILTKNRNFKTAQ 122

Query: 186 KVYKKMVQLGVVANIHLYNVLIHA--CCKSSDV--DKVEKLLCEMEFKDVRADLF----- 236
            ++ K++      N +L+  L+H+   C SS +  D + K    M       D F     
Sbjct: 123 SIFSKII----TTNSNLFESLLHSYTLCNSSPLVFDTLFKTFAHMNKLRNATDTFVKMKE 178

Query: 237 --------TYNTLIA--LYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRM 286
                   + N  ++  LY K+      ++   +M R  ISP++ T N ++  +C+ G +
Sbjct: 179 YGFFPTVESCNAFLSSMLYLKRP--ELVVSFYRQMRRNRISPNVYTINMVVSAYCKLGEL 236

Query: 287 REARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAK-GVYPGVVTYNS 343
            +A  +   +K  G  PN VT+ +LI GYC    L  AL++R++M  K GV+P VVT+N+
Sbjct: 237 NKASEVLEKMKDMGLCPNVVTFNSLISGYCDKGLLGLALKVRDLMMGKNGVFPNVVTFNT 296

Query: 344 ILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAG 403
           ++   CKEG++ +ANR+ +EM    +AP+ VT NTLIN + + G++   + +   M    
Sbjct: 297 LINGFCKEGKLHEANRVFSEMKLANVAPNVVTYNTLINGFGQAGNSEMGIGLFEEMERNK 356

Query: 404 LMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALL 463
           +  D  TY  LI G CK  +   A  ++  +      P+  ++S L+ G C +NN E   
Sbjct: 357 VKADILTYNGLILGLCKEGKTKKAAYMVKELDKGNLVPNASTFSALIAGQCVRNNSERAF 416

Query: 464 KLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAY 523
            +    V  G   + + +R L   FCK E  D A ++   M    +  DS I + +    
Sbjct: 417 LVYRSMVRSGFSPNENTFRMLASAFCKNEDFDGAVQVLRDMLERFMTPDSSILSEVYSGL 476

Query: 524 WRAGEPKACSDILDDMYRRRLM 545
            R G  +    +  ++  +RL+
Sbjct: 477 CRCGRKQFALMLCSEIEAKRLL 498



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 77/283 (27%), Positives = 139/283 (49%), Gaps = 4/283 (1%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N + ++ +V  Y  L       +V ++M+   L P++     L++      L  +  KV 
Sbjct: 219 NVYTINMVVSAYCKLGELNKASEVLEKMKDMGLCPNVVTFNSLISGYCDKGLLGLALKVR 278

Query: 189 KKMV-QLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCK 247
             M+ + GV  N+  +N LI+  CK   + +  ++  EM+  +V  ++ TYNTLI  + +
Sbjct: 279 DLMMGKNGVFPNVVTFNTLINGFCKEGKLHEANRVFSEMKLANVAPNVVTYNTLINGFGQ 338

Query: 248 KGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI-KGA-TPNHVT 305
            G     + + + MER  +  DI+TYN LI G C+EG+ ++A  + +++ KG   PN  T
Sbjct: 339 AGNSEMGIGLFEEMERNKVKADILTYNGLILGLCKEGKTKKAAYMVKELDKGNLVPNAST 398

Query: 306 YTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMN 365
           ++ LI G C  N+ E A  +   M   G  P   T+  +    CK      A ++L +M 
Sbjct: 399 FSALIAGQCVRNNSERAFLVYRSMVRSGFSPNENTFRMLASAFCKNEDFDGAVQVLRDML 458

Query: 366 EKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ 408
           E+ + PD+   + + +  C+ G    A+ + +  +EA  +L Q
Sbjct: 459 ERFMTPDSSILSEVYSGLCRCGRKQFALMLCSE-IEAKRLLPQ 500



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 58/281 (20%), Positives = 123/281 (43%), Gaps = 21/281 (7%)

Query: 272 TYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAA 331
           T++ L+H   +    + A+ +F  I   T N   + +L+  Y   N              
Sbjct: 104 THSFLLHILTKNRNFKTAQSIFSKI--ITTNSNLFESLLHSYTLCNS------------- 148

Query: 332 KGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTAS 391
                  + ++++ +      ++R+A     +M E    P   +CN  +++   +     
Sbjct: 149 -----SPLVFDTLFKTFAHMNKLRNATDTFVKMKEYGFFPTVESCNAFLSSMLYLKRPEL 203

Query: 392 AMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVD 451
            +    +M    +  + +T   ++  +CK  E++ A E+L  M D G  P+  +++ L+ 
Sbjct: 204 VVSFYRQMRRNRISPNVYTINMVVSAYCKLGELNKASEVLEKMKDMGLCPNVVTFNSLIS 263

Query: 452 GYCNKNNEEALLKLLDEFVSR-GLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGIL 510
           GYC+K      LK+ D  + + G+  +V  +  LI  FCK+ K+  A R+F+ M+   + 
Sbjct: 264 GYCDKGLLGLALKVRDLMMGKNGVFPNVVTFNTLINGFCKEGKLHEANRVFSEMKLANVA 323

Query: 511 GDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIY 551
            + V Y +L   + +AG  +    + ++M R ++   +  Y
Sbjct: 324 PNVVTYNTLINGFGQAGNSEMGIGLFEEMERNKVKADILTY 364


>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Vitis vinifera]
          Length = 625

 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 178/587 (30%), Positives = 279/587 (47%), Gaps = 74/587 (12%)

Query: 32  PNIASSLTSTAIHKVLLNLYNCCHI-PSLSCA-FFKWAESAVPNYKHSLQSHWTMI---- 85
           P++ SSL S  +H +L N     HI  + SC  FF +       YK  L+++ T+I    
Sbjct: 46  PSLLSSLNSQTVHLILSN-----HILTAESCLDFFHFIRKNY--YKPDLRAYITLIFKLY 98

Query: 86  -----HILTKNKHFKSAQNMLEKIALRDFLSTP-SVLNALVKIHDDPDGNSH-------- 131
                  L K++ F   +++    A+ D L  P +V+ +LV   DD    S         
Sbjct: 99  RSRKSDKLHKSQKFAEIRHLFNCAAVDDGLRVPVTVIASLV---DDACNESKCNRAKFKE 155

Query: 132 -VLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKK 190
                L   YA+ KM  + L+ F+ M          +C V L +L +    D   + +++
Sbjct: 156 KFFDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRR 215

Query: 191 MVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK-- 248
           MV L V   ++   +++   CK  DV+   KL+ E+  K V+A++ TYN  I  Y K+  
Sbjct: 216 MVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLD 275

Query: 249 -GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVT 305
            G   E L +   ME+EG++ ++VTY  LIHGF   G++ EA+RLF ++  KG   +   
Sbjct: 276 LGGVAEILTL---MEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYV 332

Query: 306 YTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMN 365
           YT++I   CR+ +++ AL L + M  KG+ P   TY +++  +CK G++  A  L+NEM 
Sbjct: 333 YTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQ 392

Query: 366 EKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMD 425
            K I  + V  NTLI+ YC+ G    A++++  M + GL  D F Y ++  G CK    D
Sbjct: 393 GKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKD 452

Query: 426 IAKELLFGMLDAGFSPS----------YC-------------------------SYSWLV 450
            AK LLF M++ G SP+          YC                         +Y+ L+
Sbjct: 453 EAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLI 512

Query: 451 DGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGIL 510
           DGY  + N +   KL DE  +RGL  DV    +LI   C   KVD A +LF+ M   G++
Sbjct: 513 DGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLV 572

Query: 511 GDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSAS 557
            + V YT++     + G  +    + D+M    L     +Y S   S
Sbjct: 573 PNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGS 619



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 128/274 (46%), Gaps = 19/274 (6%)

Query: 77  SLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWL 136
           S  ++  +IH + K    ++AQ ++ ++  +     P + N L+      DG        
Sbjct: 364 SAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLI------DG-------- 409

Query: 137 VIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGV 196
              Y    M  + L++   M    L   + A   + + L K    D    +   MV+ GV
Sbjct: 410 ---YCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGV 466

Query: 197 VANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALA 256
             N   +  LI   CK  +  + +++  EME K    ++ TYN LI  Y K+G   EA  
Sbjct: 467 SPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHK 526

Query: 257 VQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYC 314
           ++D +E  G+ PD+ T  SLIHG C +G++  A +LF ++  +G  PN VTYT +I G  
Sbjct: 527 LKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLS 586

Query: 315 RANDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
           +    EEA +L + M   G+ P    Y+S++  L
Sbjct: 587 KDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSL 620


>gi|225447562|ref|XP_002269867.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
           mitochondrial-like [Vitis vinifera]
          Length = 616

 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 140/462 (30%), Positives = 250/462 (54%), Gaps = 9/462 (1%)

Query: 10  DTKFIKTISAIMLKGHWAKLLNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAES 69
           D  F+    + ++   WAKL   ++++ LT   +  ++L +    H+  LS  FF W ++
Sbjct: 129 DLDFVNVAHSHLINSDWAKL--NSMSTGLTPYRMKHIMLKIKKD-HV--LSFEFFNWVKA 183

Query: 70  AVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVL-NALVKIHDDPDG 128
             PN + +L+++  ++HILTKN  FKSA+++L+ I     +  PS L  A++  +   D 
Sbjct: 184 QNPNCQ-TLETYSIILHILTKNHKFKSAESVLKGILGSGSIDHPSKLFEAILYSYRICDS 242

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           +  V   L   YA +K  ++ + VF QM+ +  +P + +C   +++    +  D+    Y
Sbjct: 243 SPCVFDSLFKTYAQMKKLRNAIDVFCQMKDYGFLPRVESCNAYISASISLQRGDIALTFY 302

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
           ++M +  +  N++  N+++ A CK   ++K  ++   ME       + +YNTLIA YC K
Sbjct: 303 REMQRYRISPNVYTLNMVMCAFCKWGKLEKAIEVFKRMETMGFSPTITSYNTLIAGYCNK 362

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKG--ATPNHVTY 306
           G+    + ++  ME+ G+ PD VT+N+LI+GFCR G++ EA ++F ++K     PN +TY
Sbjct: 363 GLLNSGMKLKILMEKNGVRPDDVTFNTLINGFCRGGKLHEANKIFSEMKANDVVPNTITY 422

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
            TLI+GY +  + E   RL + M   G+   ++TYN+++  LC EGR + A  L+ E++ 
Sbjct: 423 NTLINGYSQVGNSEMGGRLHDEMLRNGIKADILTYNALILGLCMEGRTKKAAYLVKELDR 482

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
           + + P++ T + LI   C   ++  A ++   M+ +G   +  T+K LI  FCK ++ D 
Sbjct: 483 ENLVPNSSTFSALITGQCVRKNSERAFQLYKSMIRSGCHPNYHTFKMLISTFCKNEDFDG 542

Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
           A E++  M +   +P   + S L  G      EE  LKL  E
Sbjct: 543 AVEVVREMSERSIAPDSDTLSELCRGLWLSGKEELALKLCKE 584



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 87/294 (29%), Positives = 148/294 (50%), Gaps = 2/294 (0%)

Query: 254 ALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLID 311
           AL     M+R  ISP++ T N ++  FC+ G++ +A  +F+ ++  G +P   +Y TLI 
Sbjct: 298 ALTFYREMQRYRISPNVYTLNMVMCAFCKWGKLEKAIEVFKRMETMGFSPTITSYNTLIA 357

Query: 312 GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAP 371
           GYC    L   ++L+ +M   GV P  VT+N+++   C+ G++ +AN++ +EM    + P
Sbjct: 358 GYCNKGLLNSGMKLKILMEKNGVRPDDVTFNTLINGFCRGGKLHEANKIFSEMKANDVVP 417

Query: 372 DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
           + +T NTLIN Y ++G++    ++ + ML  G+  D  TY ALI G C       A  L+
Sbjct: 418 NTITYNTLINGYSQVGNSEMGGRLHDEMLRNGIKADILTYNALILGLCMEGRTKKAAYLV 477

Query: 432 FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
             +      P+  ++S L+ G C + N E   +L    +  G   +   ++ LI  FCK 
Sbjct: 478 KELDRENLVPNSSTFSALITGQCVRKNSERAFQLYKSMIRSGCHPNYHTFKMLISTFCKN 537

Query: 492 EKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
           E  D A  +   M    I  DS   + L    W +G+ +    +  +M  + LM
Sbjct: 538 EDFDGAVEVVREMSERSIAPDSDTLSELCRGLWLSGKEELALKLCKEMEMKHLM 591



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 65/249 (26%), Positives = 111/249 (44%), Gaps = 2/249 (0%)

Query: 273 YNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMA 330
           ++SL   + +  ++R A  +F  +K  G  P   +    I         + AL     M 
Sbjct: 247 FDSLFKTYAQMKKLRNAIDVFCQMKDYGFLPRVESCNAYISASISLQRGDIALTFYREMQ 306

Query: 331 AKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTA 390
              + P V T N ++   CK G++  A  +   M     +P   + NTLI  YC  G   
Sbjct: 307 RYRISPNVYTLNMVMCAFCKWGKLEKAIEVFKRMETMGFSPTITSYNTLIAGYCNKGLLN 366

Query: 391 SAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLV 450
           S MK+K  M + G+  D  T+  LI+GFC+  ++  A ++   M      P+  +Y+ L+
Sbjct: 367 SGMKLKILMEKNGVRPDDVTFNTLINGFCRGGKLHEANKIFSEMKANDVVPNTITYNTLI 426

Query: 451 DGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGIL 510
           +GY    N E   +L DE +  G+  D+  Y ALI   C + +   A  L   +    ++
Sbjct: 427 NGYSQVGNSEMGGRLHDEMLRNGIKADILTYNALILGLCMEGRTKKAAYLVKELDRENLV 486

Query: 511 GDSVIYTSL 519
            +S  +++L
Sbjct: 487 PNSSTFSAL 495



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/216 (25%), Positives = 103/216 (47%), Gaps = 4/216 (1%)

Query: 341 YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML 400
           ++S+ +   +  ++R+A  +  +M +    P   +CN  I+A   +     A+     M 
Sbjct: 247 FDSLFKTYAQMKKLRNAIDVFCQMKDYGFLPRVESCNAYISASISLQRGDIALTFYREMQ 306

Query: 401 EAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKN--N 458
              +  + +T   ++  FCK  +++ A E+   M   GFSP+  SY+ L+ GYCNK   N
Sbjct: 307 RYRISPNVYTLNMVMCAFCKWGKLEKAIEVFKRMETMGFSPTITSYNTLIAGYCNKGLLN 366

Query: 459 EEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTS 518
               LK+L E    G+  D   +  LI  FC+  K+  A ++F+ M+ N ++ +++ Y +
Sbjct: 367 SGMKLKILME--KNGVRPDDVTFNTLINGFCRGGKLHEANKIFSEMKANDVVPNTITYNT 424

Query: 519 LAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSF 554
           L   Y + G  +    + D+M R  +   +  Y + 
Sbjct: 425 LINGYSQVGNSEMGGRLHDEMLRNGIKADILTYNAL 460



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 62/275 (22%), Positives = 111/275 (40%), Gaps = 4/275 (1%)

Query: 275 SLIHGFCREGRMREARRLFRDI----KGATPNHVTYTTLIDGYCRANDLEEALRLREVMA 330
           S++ G    G +    +LF  I    +    +   + +L   Y +   L  A+ +   M 
Sbjct: 212 SVLKGILGSGSIDHPSKLFEAILYSYRICDSSPCVFDSLFKTYAQMKKLRNAIDVFCQMK 271

Query: 331 AKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTA 390
             G  P V + N+ +       R   A     EM   +I+P+  T N ++ A+CK G   
Sbjct: 272 DYGFLPRVESCNAYISASISLQRGDIALTFYREMQRYRISPNVYTLNMVMCAFCKWGKLE 331

Query: 391 SAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLV 450
            A++V  RM   G      +Y  LI G+C    ++   +L   M   G  P   +++ L+
Sbjct: 332 KAIEVFKRMETMGFSPTITSYNTLIAGYCNKGLLNSGMKLKILMEKNGVRPDDVTFNTLI 391

Query: 451 DGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGIL 510
           +G+C         K+  E  +  +  +   Y  LI  + +    +   RL + M  NGI 
Sbjct: 392 NGFCRGGKLHEANKIFSEMKANDVVPNTITYNTLINGYSQVGNSEMGGRLHDEMLRNGIK 451

Query: 511 GDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
            D + Y +L       G  K  + ++ ++ R  L+
Sbjct: 452 ADILTYNALILGLCMEGRTKKAAYLVKELDRENLV 486



 Score = 52.4 bits (124), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 43/220 (19%), Positives = 90/220 (40%), Gaps = 2/220 (0%)

Query: 343 SILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTC--NTLINAYCKIGDTASAMKVKNRML 400
           S+L+ +   G I   ++L   +       D+  C  ++L   Y ++    +A+ V  +M 
Sbjct: 212 SVLKGILGSGSIDHPSKLFEAILYSYRICDSSPCVFDSLFKTYAQMKKLRNAIDVFCQMK 271

Query: 401 EAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEE 460
           + G +    +  A I      +  DIA      M     SP+  + + ++  +C     E
Sbjct: 272 DYGFLPRVESCNAYISASISLQRGDIALTFYREMQRYRISPNVYTLNMVMCAFCKWGKLE 331

Query: 461 ALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLA 520
             +++     + G    ++ Y  LI  +C K  ++   +L  LM+ NG+  D V + +L 
Sbjct: 332 KAIEVFKRMETMGFSPTITSYNTLIAGYCNKGLLNSGMKLKILMEKNGVRPDDVTFNTLI 391

Query: 521 YAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAK 560
             + R G+    + I  +M    ++     Y +    Y++
Sbjct: 392 NGFCRGGKLHEANKIFSEMKANDVVPNTITYNTLINGYSQ 431


>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
 gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
          Length = 659

 Score =  234 bits (598), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 139/431 (32%), Positives = 220/431 (51%), Gaps = 25/431 (5%)

Query: 80  SHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIF 139
           ++  +IH L + +    A  +L+++  +D              H D    + V + L+  
Sbjct: 94  TYCILIHGLCQCQRIDEAYQLLDEMIQKD-------------CHPD----AAVYNCLIAG 136

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
              +        V   M   + +P +   T L+    +    D   K+ +KM + G+  +
Sbjct: 137 LCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPD 196

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
              YN L++  CK + +++V KLL EM       D F+YNT++A  C+ G + EA  + +
Sbjct: 197 TVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILE 256

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKG--ATPNHVTYTTLIDGYCRAN 317
           +M  +   PD+VTYNSL+ GFC+  +M EA RL  D+ G    P  +TYTTLI G+ RA+
Sbjct: 257 KMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRAD 316

Query: 318 DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCN 377
            L +A R+ E M   G+ P +VTYN +L  LCK G++ +A+ LL  M EK  APD VT +
Sbjct: 317 RLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYS 376

Query: 378 TLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA 437
            L+N  CK+G    A  +   MLE G   +  T+  +I GFCKA ++D   ++L  M + 
Sbjct: 377 ILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEV 436

Query: 438 GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYA 497
             +P   +YS L+DGYC  N      ++ D F   G+  D + Y +++   C   KV+ A
Sbjct: 437 SCTPDVVTYSTLIDGYCKAN------RMQDAFAILGISPDKASYSSMLEGLCSTGKVEEA 490

Query: 498 QRLFNLMQGNG 508
           Q + +LM   G
Sbjct: 491 QEVMDLMTKQG 501



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 122/368 (33%), Positives = 181/368 (49%), Gaps = 2/368 (0%)

Query: 203 YNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRME 262
           Y +LIH  C+   +D+  +LL EM  KD   D   YN LIA  CK G    A  V   M 
Sbjct: 95  YCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMML 154

Query: 263 REGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLE 320
                PD++TY SLI G C+   + EAR+L   +K  G TP+ V Y  L++G C+ N LE
Sbjct: 155 ERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLE 214

Query: 321 EALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLI 380
           E  +L E M   G  P   +YN+++  LC+ G+  +A ++L +M EKK  PD VT N+L+
Sbjct: 215 EVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLM 274

Query: 381 NAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFS 440
           + +CK+     A ++   M+         TY  LI GF +A  +  A  ++  M  AG S
Sbjct: 275 DGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGIS 334

Query: 441 PSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRL 500
           P   +Y+ L+DG C     E   +LL+  V +    DV  Y  L+   CK  KVD A+ L
Sbjct: 335 PDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLL 394

Query: 501 FNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAK 560
             +M   G   + V + ++   + +AG+      +L+ M        +  Y +    Y K
Sbjct: 395 LEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCK 454

Query: 561 DNEILDLF 568
            N + D F
Sbjct: 455 ANRMQDAF 462



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 111/366 (30%), Positives = 188/366 (51%), Gaps = 2/366 (0%)

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
           P      +L++ L + +  D  +++  +M+Q     +  +YN LI   CK   +D    +
Sbjct: 90  PTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNV 149

Query: 223 LCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR 282
           L  M  +    D+ TY +LI   C+     EA  + ++M+  G++PD V YN+L++G C+
Sbjct: 150 LKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCK 209

Query: 283 EGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVT 340
           + ++ E  +L  ++   G  P+  +Y T++   C +   EEA ++ E M  K   P VVT
Sbjct: 210 QNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVT 269

Query: 341 YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML 400
           YNS++   CK  ++ +A RLL +M  ++ AP  +T  TLI  + +    A A +V   M 
Sbjct: 270 YNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMF 329

Query: 401 EAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEE 460
           +AG+  D  TY  L+ G CKA +++ A ELL  M++   +P   +YS LV+G C     +
Sbjct: 330 KAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVD 389

Query: 461 ALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLA 520
               LL+  + RG   ++  +  +I  FCK  KVD   ++  LM+      D V Y++L 
Sbjct: 390 DARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLI 449

Query: 521 YAYWRA 526
             Y +A
Sbjct: 450 DGYCKA 455



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 124/443 (27%), Positives = 216/443 (48%), Gaps = 27/443 (6%)

Query: 80  SHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIF 139
           S+ T++  L ++  ++ A  +LEK+  +         N+L+      DG           
Sbjct: 234 SYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLM------DG----------- 276

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAK-DRLTDMVWKVYKKMVQLGVVA 198
           +  +    +  ++ + M      P +   T L+   ++ DRL D  ++V + M + G+  
Sbjct: 277 FCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLAD-AYRVMEDMFKAGISP 335

Query: 199 NIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQ 258
           ++  YN L+   CK+  +++  +LL  M  KD   D+ TY+ L+   CK G   +A  + 
Sbjct: 336 DLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLL 395

Query: 259 DRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRA 316
           + M   G  P++VT+N++I GFC+ G++ E  ++   +K    TP+ VTY+TLIDGYC+A
Sbjct: 396 EMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKA 455

Query: 317 NDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTC 376
           N      R+++  A  G+ P   +Y+S+L  LC  G++ +A  +++ M ++   P +   
Sbjct: 456 N------RMQDAFAILGISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHY 509

Query: 377 NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD 436
             +I   C +     A+K+   M E G   + +TY  LI+G CK K ++ A  +L  ML+
Sbjct: 510 ALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLE 569

Query: 437 AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDY 496
            G  P   +Y+ L+DG+C  N  +A  +        G   D   Y  LI  FC+   V+ 
Sbjct: 570 KGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEK 629

Query: 497 AQRLFNLMQGNGILGDSVIYTSL 519
           A  +  LM   G   D+  Y SL
Sbjct: 630 AIEVMQLMLEKGCNPDAATYFSL 652



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 96/315 (30%), Positives = 155/315 (49%)

Query: 237 TYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI 296
           TY  LI  + + G     L + + M     SPD++T+N+++  +C+ G +  A   FR  
Sbjct: 26  TYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDLDRALSHFRGK 85

Query: 297 KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRD 356
              +P   TY  LI G C+   ++EA +L + M  K  +P    YN ++  LCK G+I  
Sbjct: 86  MWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDA 145

Query: 357 ANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIH 416
           A  +L  M E+   PD +T  +LI   C+      A K+  +M E+GL  D   Y AL++
Sbjct: 146 ARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLN 205

Query: 417 GFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCV 476
           G CK  +++   +LL  M++AG  P   SY+ +V   C     E   K+L++ + +    
Sbjct: 206 GLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGP 265

Query: 477 DVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDIL 536
           DV  Y +L+  FCK  K+D A+RL   M G       + YT+L   + RA        ++
Sbjct: 266 DVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVM 325

Query: 537 DDMYRRRLMITLKIY 551
           +DM++  +   L  Y
Sbjct: 326 EDMFKAGISPDLVTY 340



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 90/304 (29%), Positives = 149/304 (49%), Gaps = 6/304 (1%)

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR- 324
           P   TY +LI GF R G  +    +  ++  +  +P+ +T+ T++  YC+  DL+ AL  
Sbjct: 22  PSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDLDRALSH 81

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
            R  M      P   TY  ++  LC+  RI +A +LL+EM +K   PD    N LI   C
Sbjct: 82  FRGKMWCS---PTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLC 138

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           K+G   +A  V   MLE   + D  TY +LI G C+   +D A++L+  M ++G +P   
Sbjct: 139 KMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTV 198

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
           +Y+ L++G C +N  E + KLL+E V  G   D   Y  ++   C+  K + A ++   M
Sbjct: 199 AYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKM 258

Query: 505 QGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
                  D V Y SL   + +  +      +L+DM  RR   T+  Y +    +++ + +
Sbjct: 259 IEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRL 318

Query: 565 LDLF 568
            D +
Sbjct: 319 ADAY 322



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 66/239 (27%), Positives = 112/239 (46%), Gaps = 10/239 (4%)

Query: 115 VLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNS 174
           VL  + ++   PD  ++  S L+  Y      QD   +        + P   + + +L  
Sbjct: 429 VLELMKEVSCTPDVVTY--STLIDGYCKANRMQDAFAIL------GISPDKASYSSMLEG 480

Query: 175 LAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRAD 234
           L      +   +V   M + G       Y ++I   C     D+  K+L  M  +    +
Sbjct: 481 LCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPN 540

Query: 235 LFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR 294
           L+TY+ LI   CK     +A+ V D M  +G  PD+ TY SLI GFC+  +M  A + F+
Sbjct: 541 LYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFK 600

Query: 295 DIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
            ++  G  P+ + Y  LI G+C++ ++E+A+ + ++M  KG  P   TY S++R L  E
Sbjct: 601 TMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNPDAATYFSLMRSLTTE 659



 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 47/208 (22%), Positives = 89/208 (42%), Gaps = 4/208 (1%)

Query: 76  HSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSW 135
           + +Q  + ++ I      + S   MLE +     +     +  L+     P  +SH  + 
Sbjct: 456 NRMQDAFAILGISPDKASYSS---MLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSH-YAL 511

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           ++    +++   + L++   M      P+L+  ++L+N L K +  +    V   M++ G
Sbjct: 512 IIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKG 571

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
            V ++  Y  LI   CK + +D   +    M       D   YN LI+ +C+ G   +A+
Sbjct: 572 CVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAI 631

Query: 256 AVQDRMEREGISPDIVTYNSLIHGFCRE 283
            V   M  +G +PD  TY SL+     E
Sbjct: 632 EVMQLMLEKGCNPDAATYFSLMRSLTTE 659


>gi|410109923|gb|AFV61041.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           hederifolia]
          Length = 431

 Score =  234 bits (597), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 129/428 (30%), Positives = 230/428 (53%), Gaps = 4/428 (0%)

Query: 62  AFFKWAES-AVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS-VLNAL 119
           +FF W  S A   ++H+L S+ TMIH L  ++    A+++++ +  R    + S V   +
Sbjct: 2   SFFTWLSSPANSTFRHTLHSYCTMIHFLCTHQMLLEAKSLIQVVVSRKGKGSASAVFATI 61

Query: 120 VKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDR 179
           ++       + +VLS L+  Y      +D ++ +   R H L      C  +L  L K +
Sbjct: 62  LETKGTQRSDIYVLSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLK 121

Query: 180 LTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYN 239
              +VW  Y+++++ G  A+++ +N+L+H  CK  D+   + +   +    +R  + +YN
Sbjct: 122 YFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYN 181

Query: 240 TLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IK 297
           TL+  Y + G   E   ++  M   G+ PD+ TY+ LI+G C+E +M +A  LF +  +K
Sbjct: 182 TLMNGYIRLGDLNEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVK 241

Query: 298 GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDA 357
           G  PN VT+TTLIDG+C+   ++ A+ + + M ++ + P ++TYN+++  L K+G ++ A
Sbjct: 242 GLIPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQCLLPDLITYNTLIYGLXKKGDLKQA 301

Query: 358 NRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHG 417
           + L++EM+ K + PD  T  TLI+  CK GD  +A + + RM++  + LD   Y ALI G
Sbjct: 302 HDLIDEMSMKGLKPDKFTYXTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISG 361

Query: 418 FCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVD 477
            C+      A+++L  ML  G  P   +Y+ +++ +C K +     KLL E    G    
Sbjct: 362 LCQEGRSVDAEKMLREMLSVGLKPDDRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPS 421

Query: 478 VSVYRALI 485
           V  Y  L+
Sbjct: 422 VVTYNVLM 429



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 92/279 (32%), Positives = 146/279 (52%), Gaps = 2/279 (0%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           G    +  +N L+H FC++G +R A+ +F  I   G  P+ V+Y TL++GY R  DL E 
Sbjct: 137 GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLNEG 196

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            RL+  M A GV P V TY+ ++  LCKE ++ DAN L +EM  K + P+ VT  TLI+ 
Sbjct: 197 FRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDG 256

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +CK G    AM++  +ML   L+ D  TY  LI+G  K  ++  A +L+  M   G  P 
Sbjct: 257 HCKNGRVDLAMEIYKQMLSQCLLPDLITYNTLIYGLXKKGDLKQAHDLIDEMSMKGLKPD 316

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y  L+DG C + + +   +     +   + +D   Y ALI   C++ +   A+++  
Sbjct: 317 KFTYXTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLR 376

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
            M   G+  D   YT +   + + G+    S +L +M R
Sbjct: 377 EMLSVGLKPDDRTYTMIINEFCKKGDVWKGSKLLKEMQR 415



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 86/324 (26%), Positives = 145/324 (44%), Gaps = 34/324 (10%)

Query: 232 RADLFTYNTLIALYCKKGMHYEALA-VQDRMEREGISP-----------------DIVTY 273
           R  L +Y T+I   C   M  EA + +Q  + R+G                    DI   
Sbjct: 16  RHTLHSYCTMIHFLCTHQMLLEAKSLIQVVVSRKGKGSASAVFATILETKGTQRSDIYVL 75

Query: 274 NSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKG 333
           + LI  +   G +R+A   +R     T  H  +       CR   LE  ++L+      G
Sbjct: 76  SGLITAYLESGFLRDAIECYR----LTREHKLWVPF--DTCRKV-LEHLMKLKYFKLVWG 128

Query: 334 VYPGVVT---------YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
            Y  ++          +N ++ + CK+G IR A  + + + +  + P  V+ NTL+N Y 
Sbjct: 129 FYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 188

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           ++GD     ++K+ ML +G+  D +TY  LI+G CK  +MD A EL   ML  G  P+  
Sbjct: 189 RLGDLNEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGV 248

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
           +++ L+DG+C     +  +++  + +S+ L  D+  Y  LI    KK  +  A  L + M
Sbjct: 249 TFTTLIDGHCKNGRVDLAMEIYKQMLSQCLLPDLITYNTLIYGLXKKGDLKQAHDLIDEM 308

Query: 505 QGNGILGDSVIYTSLAYAYWRAGE 528
              G+  D   Y +L     + G+
Sbjct: 309 SMKGLKPDKFTYXTLIDGCCKEGD 332



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/139 (28%), Positives = 67/139 (48%), Gaps = 3/139 (2%)

Query: 141 ANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANI 200
            +LK   D   + D+M +  L P       L++   K+   D  ++  K+M+Q  +  + 
Sbjct: 296 GDLKQAHD---LIDEMSMKGLKPDKFTYXTLIDGCCKEGDLDTAFEHRKRMIQENIRLDD 352

Query: 201 HLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDR 260
             Y  LI   C+       EK+L EM    ++ D  TY  +I  +CKKG  ++   +   
Sbjct: 353 VAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDDRTYTMIINEFCKKGDVWKGSKLLKE 412

Query: 261 MEREGISPDIVTYNSLIHG 279
           M+R+G  P +VTYN L++G
Sbjct: 413 MQRDGHVPSVVTYNVLMNG 431


>gi|449444614|ref|XP_004140069.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
           mitochondrial-like [Cucumis sativus]
 gi|449528063|ref|XP_004171026.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
           mitochondrial-like [Cucumis sativus]
          Length = 536

 Score =  234 bits (597), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 137/435 (31%), Positives = 239/435 (54%), Gaps = 9/435 (2%)

Query: 10  DTKFIKTISAIMLKGHWAKLLNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAES 69
           D  F+  + + ++   W+KL    ++  LT+  +  +LL          LS  FF W  +
Sbjct: 53  DLDFVNVVHSHLIHSDWSKL--DCLSMGLTAFRVKHILLKTQK---DYVLSLEFFNWVAT 107

Query: 70  AVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVL-NALVKIHDDPDG 128
             P+  H+L++H  ++HILTK + FKSA+++L  I     +  PS L  +L+  +   D 
Sbjct: 108 QNPS-SHTLETHCIILHILTKRRKFKSAESILRSIIESCSIDFPSKLFESLLYSYRLCDS 166

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           + HV   L   +A+LK  ++    F +M+ +  +P + +C   L+SL      D+    Y
Sbjct: 167 SPHVFDLLFKTFAHLKKFRNASDTFCRMKDYGFLPTVESCNAYLSSLLNFSRGDIALAFY 226

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
           ++M +  +  N +  N++I ACCK   +DK   +  EM       ++ +YNTLIA YC K
Sbjct: 227 REMRRSRIYPNSYTLNLVICACCKLGRLDKANVVFEEMGTMGFSPNVASYNTLIAGYCNK 286

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGA--TPNHVTY 306
           G+   A+ ++  ME+ G+ PD+VT+N+L++GFC+ G+++EA +LF ++KG   +P  VTY
Sbjct: 287 GLLSSAMKLRSVMEKNGVPPDVVTFNTLVNGFCKVGKLQEASKLFGEMKGMSLSPTTVTY 346

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
             LI+GY +A + E   RL E M+   V   ++TYN+++  LCKEG+ + A  L+ E++E
Sbjct: 347 NILINGYSKAGNCEMGNRLFEEMSRFQVKADILTYNALILGLCKEGKTKKAAYLVRELDE 406

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
           K + P+  T + LI   C    +  A ++   M+++       T++ L+  FC+ ++ D 
Sbjct: 407 KGLVPNASTFSALIYGQCVQKQSERAFQIYKSMIKSSFTPCDQTFRMLLSTFCENEDYDG 466

Query: 427 AKELLFGMLDAGFSP 441
           A +LL  ML+   +P
Sbjct: 467 AVQLLEEMLNRHKAP 481



 Score =  108 bits (270), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 65/242 (26%), Positives = 114/242 (47%)

Query: 322 ALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
           AL     M    +YP   T N ++   CK GR+  AN +  EM     +P+  + NTLI 
Sbjct: 222 ALAFYREMRRSRIYPNSYTLNLVICACCKLGRLDKANVVFEEMGTMGFSPNVASYNTLIA 281

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
            YC  G  +SAMK+++ M + G+  D  T+  L++GFCK  ++  A +L   M     SP
Sbjct: 282 GYCNKGLLSSAMKLRSVMEKNGVPPDVVTFNTLVNGFCKVGKLQEASKLFGEMKGMSLSP 341

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
           +  +Y+ L++GY    N E   +L +E     +  D+  Y ALI   CK+ K   A  L 
Sbjct: 342 TTVTYNILINGYSKAGNCEMGNRLFEEMSRFQVKADILTYNALILGLCKEGKTKKAAYLV 401

Query: 502 NLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKD 561
             +   G++ ++  +++L Y      + +    I   M +       + +R   +++ ++
Sbjct: 402 RELDEKGLVPNASTFSALIYGQCVQKQSERAFQIYKSMIKSSFTPCDQTFRMLLSTFCEN 461

Query: 562 NE 563
            +
Sbjct: 462 ED 463



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 52/211 (24%), Positives = 93/211 (44%)

Query: 353 RIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYK 412
           + R+A+     M +    P   +CN  +++         A+     M  + +  + +T  
Sbjct: 183 KFRNASDTFCRMKDYGFLPTVESCNAYLSSLLNFSRGDIALAFYREMRRSRIYPNSYTLN 242

Query: 413 ALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSR 472
            +I   CK   +D A  +   M   GFSP+  SY+ L+ GYCNK    + +KL       
Sbjct: 243 LVICACCKLGRLDKANVVFEEMGTMGFSPNVASYNTLIAGYCNKGLLSSAMKLRSVMEKN 302

Query: 473 GLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKAC 532
           G+  DV  +  L+  FCK  K+  A +LF  M+G  +   +V Y  L   Y +AG  +  
Sbjct: 303 GVPPDVVTFNTLVNGFCKVGKLQEASKLFGEMKGMSLSPTTVTYNILINGYSKAGNCEMG 362

Query: 533 SDILDDMYRRRLMITLKIYRSFSASYAKDNE 563
           + + ++M R ++   +  Y +      K+ +
Sbjct: 363 NRLFEEMSRFQVKADILTYNALILGLCKEGK 393



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/235 (25%), Positives = 92/235 (39%), Gaps = 13/235 (5%)

Query: 311 DGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIA 370
           D +CR  D              G  P V + N+ L  L    R   A     EM   +I 
Sbjct: 189 DTFCRMKDY-------------GFLPTVESCNAYLSSLLNFSRGDIALAFYREMRRSRIY 235

Query: 371 PDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL 430
           P++ T N +I A CK+G    A  V   M   G   +  +Y  LI G+C    +  A +L
Sbjct: 236 PNSYTLNLVICACCKLGRLDKANVVFEEMGTMGFSPNVASYNTLIAGYCNKGLLSSAMKL 295

Query: 431 LFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCK 490
              M   G  P   +++ LV+G+C     +   KL  E     L      Y  LI  + K
Sbjct: 296 RSVMEKNGVPPDVVTFNTLVNGFCKVGKLQEASKLFGEMKGMSLSPTTVTYNILINGYSK 355

Query: 491 KEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
               +   RLF  M    +  D + Y +L     + G+ K  + ++ ++  + L+
Sbjct: 356 AGNCEMGNRLFEEMSRFQVKADILTYNALILGLCKEGKTKKAAYLVRELDEKGLV 410


>gi|15226583|ref|NP_179165.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216226|sp|Q9ZQF1.1|PP152_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g15630, mitochondrial; Flags: Precursor
 gi|4335729|gb|AAD17407.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|330251331|gb|AEC06425.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 627

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 153/556 (27%), Positives = 259/556 (46%), Gaps = 21/556 (3%)

Query: 33  NIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNK 92
           ++A  LT + +   LL+L      P+L+  F     + +  Y+   Q+    I +++K  
Sbjct: 64  HVADKLTPSLVSTTLLSL---VKTPNLAFNFV----NHIDLYRLDFQTQCLAIAVISKLS 116

Query: 93  HFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVL-SWLVIFYANLKMTQDGLQ 151
             K    +L+++      S  ++ + LV  HD  +  S +L   LV     L+M  + ++
Sbjct: 117 SPKPVTQLLKEVVTSRKNSIRNLFDELVLAHDRLETKSTILFDLLVRCCCQLRMVDEAIE 176

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
            F  M+     P    C  +L  L++    +  W  Y  M ++ + +N++ +N++I+  C
Sbjct: 177 CFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLC 236

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           K   + K +  L  ME   ++  + TYNTL+  +  +G    A  +   M+ +G  PD+ 
Sbjct: 237 KEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQ 296

Query: 272 TYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAA 331
           TYN ++   C EGR  E  R  ++I G  P+ V+Y  LI G     DLE A   R+ M  
Sbjct: 297 TYNPILSWMCNEGRASEVLREMKEI-GLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVK 355

Query: 332 KGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTAS 391
           +G+ P   TYN+++  L  E +I  A  L+ E+ EK I  D+VT N LIN YC+ GD   
Sbjct: 356 QGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKK 415

Query: 392 AMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVD 451
           A  + + M+  G+   QFTY +LI+  C+  +   A EL   ++  G  P     + L+D
Sbjct: 416 AFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMD 475

Query: 452 GYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILG 511
           G+C   N +    LL E     +  D   Y  L+R  C + K + A+ L   M+  GI  
Sbjct: 476 GHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKP 535

Query: 512 DSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSH 571
           D + Y +L   Y + G+ K    + D+M       TL  Y +     +K+ E        
Sbjct: 536 DHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQE-------- 587

Query: 572 VVDRGLMSKHIFKEMQ 587
               G +++ + +EM+
Sbjct: 588 ----GELAEELLREMK 599



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 125/407 (30%), Positives = 197/407 (48%), Gaps = 35/407 (8%)

Query: 75  KHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHD---------- 124
           K ++ +   MI++L K    K A+  L  + +     T    N LV+             
Sbjct: 222 KSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARL 281

Query: 125 ----------DPDGNSH--VLSWLVIFYANLKMTQDGL--QVFDQMRVHNLMPHLHACTV 170
                      PD  ++  +LSW         M  +G   +V  +M+   L+P   +  +
Sbjct: 282 IISEMKSKGFQPDMQTYNPILSW---------MCNEGRASEVLREMKEIGLVPDSVSYNI 332

Query: 171 LLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKD 230
           L+   + +   +M +    +MV+ G+V   + YN LIH     + ++  E L+ E+  K 
Sbjct: 333 LIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKG 392

Query: 231 VRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREAR 290
           +  D  TYN LI  YC+ G   +A A+ D M  +GI P   TY SLI+  CR+ + REA 
Sbjct: 393 IVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREAD 452

Query: 291 RLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
            LF  +  KG  P+ V   TL+DG+C   +++ A  L + M    + P  VTYN ++R L
Sbjct: 453 ELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGL 512

Query: 349 CKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ 408
           C EG+  +A  L+ EM  + I PD+++ NTLI+ Y K GDT  A  V++ ML  G     
Sbjct: 513 CGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTL 572

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCN 455
            TY AL+ G  K +E ++A+ELL  M   G  P+  S+  +++   N
Sbjct: 573 LTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMSN 619



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/281 (22%), Positives = 121/281 (43%), Gaps = 20/281 (7%)

Query: 52  NCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLS 111
            C +   L  AF    E        +  ++ T+IH L      ++A+ ++ +I  +  + 
Sbjct: 336 GCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVL 395

Query: 112 TPSVLNALVK-------------IHDD--PDG---NSHVLSWLVIFYANLKMTQDGLQVF 153
                N L+              +HD+   DG        + L+        T++  ++F
Sbjct: 396 DSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELF 455

Query: 154 DQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKS 213
           +++    + P L     L++        D  + + K+M  + +  +   YN L+   C  
Sbjct: 456 EKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGE 515

Query: 214 SDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTY 273
              ++  +L+ EM+ + ++ D  +YNTLI+ Y KKG    A  V+D M   G +P ++TY
Sbjct: 516 GKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTY 575

Query: 274 NSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDG 312
           N+L+ G  +      A  L R++K  G  PN  ++ ++I+ 
Sbjct: 576 NALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEA 616


>gi|410109939|gb|AFV61049.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           rehmannii]
          Length = 420

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 129/417 (30%), Positives = 225/417 (53%), Gaps = 5/417 (1%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFL-STPSVLNALVKIHDDPDGNSH 131
            ++H+L S+ T IH L  ++ F  A+++++ +  R    S  +V  A+++       + +
Sbjct: 3   TFRHTLHSYCTTIHFLCTHQMFSEAKSLIQVVVSRKGKGSAXAVFAAILETKGTQRSDIY 62

Query: 132 VLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKM 191
           V S L+  Y      +D ++ +   R H L      C  +L  L K R   +VW  Y+++
Sbjct: 63  VFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLRYFKLVWGFYEEI 122

Query: 192 VQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFK-DVRADLFTYNTLIALYCKKGM 250
           ++ G  A+++ +N+L+H  CK  D+ +V  L+ +   K  +R  + +YNTL+  Y + G 
Sbjct: 123 LECGYPASLYFFNILMHRFCKDGDI-RVAPLVFDAITKWGLRPSVVSYNTLMNGYIRLGD 181

Query: 251 HYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTT 308
             E   ++  M   G+ PD+ TY+ LI+G C+E  M +A  LF +  +KG  PN VT+TT
Sbjct: 182 LDEGFRLKSAMRASGVQPDVYTYSVLINGLCKESXMDDANELFDEMLVKGLVPNXVTFTT 241

Query: 309 LIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKK 368
           LIDG+C+   ++ A+ + + M ++ + P ++TYN+++  LCK+G +  A+ L++EM  K 
Sbjct: 242 LIDGHCKNGRVDLAMEIYKQMLSQXLLPDJITYNTLVYGLCKKGDLNQAHGLIDEMXXKG 301

Query: 369 IAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAK 428
           + PD  T  TLI+  CK GD  +A + + RM++  + LD   Y ALI G C+      A+
Sbjct: 302 LKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSXDAE 361

Query: 429 ELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
           ++L  ML  G  P   +Y+ +++ +C K +     KLL E    G    V  Y  L+
Sbjct: 362 KMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHVPXVVTYNVLM 418



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 93/279 (33%), Positives = 149/279 (53%), Gaps = 2/279 (0%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           G    +  +N L+H FC++G +R A  +F  I   G  P+ V+Y TL++GY R  DL+E 
Sbjct: 126 GYPASLYFFNILMHRFCKDGDIRVAPLVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEG 185

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            RL+  M A GV P V TY+ ++  LCKE  + DAN L +EM  K + P+ VT  TLI+ 
Sbjct: 186 FRLKSAMRASGVQPDVYTYSVLINGLCKESXMDDANELFDEMLVKGLVPNXVTFTTLIDG 245

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +CK G    AM++  +ML   L+ D  TY  L++G CK  +++ A  L+  M   G  P 
Sbjct: 246 HCKNGRVDLAMEIYKQMLSQXLLPDJITYNTLVYGLCKKGDLNQAHGLIDEMXXKGLKPD 305

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ L+DG C + + +A  +     +   + +D   Y ALI   C++ +   A+++  
Sbjct: 306 KFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSXDAEKMLR 365

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
            M   G+  D+  YT +   + + G+    S +L +M R
Sbjct: 366 EMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQR 404



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 90/341 (26%), Positives = 154/341 (45%), Gaps = 39/341 (11%)

Query: 232 RADLFTYNTLIALYCKKGMHYEALA-VQDRMEREGISP-----------------DIVTY 273
           R  L +Y T I   C   M  EA + +Q  + R+G                    DI  +
Sbjct: 5   RHTLHSYCTTIHFLCTHQMFSEAKSLIQVVVSRKGKGSAXAVFAAILETKGTQRSDIYVF 64

Query: 274 NSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKG 333
           + LI  +   G +R+A   +R     T  H  +       CR   LE  ++LR      G
Sbjct: 65  SGLITAYLESGFLRDAIECYR----LTREHKLWVPF--DTCRKV-LEHLMKLRYFKLVWG 117

Query: 334 VYPGVVT---------YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
            Y  ++          +N ++ + CK+G IR A  + + + +  + P  V+ NTL+N Y 
Sbjct: 118 FYEEILECGYPASLYFFNILMHRFCKDGDIRVAPLVFDAITKWGLRPSVVSYNTLMNGYI 177

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           ++GD     ++K+ M  +G+  D +TY  LI+G CK   MD A EL   ML  G  P+  
Sbjct: 178 RLGDLDEGFRLKSAMRASGVQPDVYTYSVLINGLCKESXMDDANELFDEMLVKGLVPNXV 237

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
           +++ L+DG+C     +  +++  + +S+ L  D+  Y  L+   CKK  ++ A  L + M
Sbjct: 238 TFTTLIDGHCKNGRVDLAMEIYKQMLSQXLLPDJITYNTLVYGLCKKGDLNQAHGLIDEM 297

Query: 505 QGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
              G+  D   YT+L     + G+  A  +     +R+R++
Sbjct: 298 XXKGLKPDKFTYTTLIDGCCKEGDLDAAFE-----HRKRMI 333



 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 62/128 (48%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           + D+M    L P     T L++   K+   D  ++  K+M+Q  +  +   Y  LI   C
Sbjct: 293 LIDEMXXKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTALISGLC 352

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           +       EK+L EM    ++ D  TY  +I  +CKKG  ++   +   M+R G  P +V
Sbjct: 353 QEGRSXDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHVPXVV 412

Query: 272 TYNSLIHG 279
           TYN L++G
Sbjct: 413 TYNVLMNG 420


>gi|410109911|gb|AFV61035.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           alba]
          Length = 413

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 125/411 (30%), Positives = 221/411 (53%), Gaps = 3/411 (0%)

Query: 78  LQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS-VLNALVKIHDDPDGNSHVLSWL 136
           L S+ TMIH L  ++ F  A+++++ +  R    + S V  A+++       + +V S L
Sbjct: 1   LHSYCTMIHFLCTHQMFSEAKSLIQXVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGL 60

Query: 137 VIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGV 196
           +  Y      +D ++ +   R H L      C  +L  L K R   +VW  Y+++++ G 
Sbjct: 61  ITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLRYFKLVWGFYEEILECGY 120

Query: 197 VANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALA 256
            A+++ +N+L+H  CK  D+   + +   +    +R  + +YNTL+  Y + G   E   
Sbjct: 121 PASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFR 180

Query: 257 VQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYC 314
           ++  M   G+ PD+ TY+ LI+G C+E +M +A  LF +  +KG  PN VT+TTLIDG+C
Sbjct: 181 LKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHC 240

Query: 315 RANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNV 374
           +   ++ A+ + + M ++ + P ++TYN+++  LCK+G +  A+ L++EM+ K + PD  
Sbjct: 241 KNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHGLIDEMSMKGLKPDKF 300

Query: 375 TCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGM 434
           T  TLI+  CK GD  +A + + RM++  + LD   Y A+I G C+      A+++L  M
Sbjct: 301 TYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTAIISGLCQEGRPVDAEKMLREM 360

Query: 435 LDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
           L  G  P   +Y+ +++ +C K +     KLL E    G    V  Y  L+
Sbjct: 361 LSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHVPSVXTYNVLM 411



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 94/289 (32%), Positives = 155/289 (53%), Gaps = 2/289 (0%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           G    +  +N L+H FC++G +R A+ +F  I   G  P+ V+Y TL++GY R  DL+E 
Sbjct: 119 GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEG 178

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            RL+  M A GV P V TY+ ++  LCKE ++ DAN L +EM  K + P+ VT  TLI+ 
Sbjct: 179 FRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDG 238

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +CK G    AM++  +ML   L+ D  TY  LI+G CK  +++ A  L+  M   G  P 
Sbjct: 239 HCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHGLIDEMSMKGLKPD 298

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ L+DG C + + +A  +     +   + +D   Y A+I   C++ +   A+++  
Sbjct: 299 KFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTAIISGLCQEGRPVDAEKMLR 358

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIY 551
            M   G+  D+  YT +   + + G+    S +L +M R   + ++  Y
Sbjct: 359 EMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHVPSVXTY 407



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 91/338 (26%), Positives = 156/338 (46%), Gaps = 39/338 (11%)

Query: 235 LFTYNTLIALYCKKGMHYEALA-VQDRMEREGISP-----------------DIVTYNSL 276
           L +Y T+I   C   M  EA + +Q  + R+G                    DI  ++ L
Sbjct: 1   LHSYCTMIHFLCTHQMFSEAKSLIQXVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGL 60

Query: 277 IHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYP 336
           I  +   G +R+A   +R     T  H  +       CR   LE  ++LR      G Y 
Sbjct: 61  ITAYLESGFLRDAIECYR----LTREHKLWVPF--DTCRKV-LEHLMKLRYFKLVWGFYE 113

Query: 337 GVVT---------YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
            ++          +N ++ + CK+G IR A  + + + +  + P  V+ NTL+N Y ++G
Sbjct: 114 EILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLG 173

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
           D     ++K+ ML +G+  D +TY  LI+G CK  +MD A EL   ML  G  P+  +++
Sbjct: 174 DLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFT 233

Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGN 507
            L+DG+C     +  +++  + +S+ L  D+  Y  LI   CKK  ++ A  L + M   
Sbjct: 234 TLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHGLIDEMSMK 293

Query: 508 GILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
           G+  D   YT+L     + G+  A  +     +R+R++
Sbjct: 294 GLKPDKFTYTTLIDGCCKEGDLDAAFE-----HRKRMI 326



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 62/128 (48%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           + D+M +  L P     T L++   K+   D  ++  K+M+Q  +  +   Y  +I   C
Sbjct: 286 LIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTAIISGLC 345

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           +       EK+L EM    ++ D  TY  +I  +CKKG  ++   +   M+R G  P + 
Sbjct: 346 QEGRPVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHVPSVX 405

Query: 272 TYNSLIHG 279
           TYN L++G
Sbjct: 406 TYNVLMNG 413


>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 624

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 161/574 (28%), Positives = 272/574 (47%), Gaps = 48/574 (8%)

Query: 9   SDTKFIKTISAIMLKGHWAKLLNPNIASSLTSTA----------IHKVLLNLYNCCHIPS 58
           ++TKF++ I     + H+ K L PN+  SL S+           +  +L +L+   H   
Sbjct: 38  TETKFLEYIQTS--QWHFIKHLAPNLTPSLLSSTLPTLHQNPILVETLLSHLHRHPHCLD 95

Query: 59  LS------CAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIAL-RDFLS 111
           L+      C  ++     +P+ K S        HIL    H  +   +  +++L R+ L+
Sbjct: 96  LNTRCITLCILYR-----LPSPKPSF-------HILQPILHTTTPTVIFNELSLARNRLN 143

Query: 112 TPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVL 171
             + L               V   L+  Y   +   + L+  + M+ + ++P    C  L
Sbjct: 144 VKTTL---------------VFDLLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSL 188

Query: 172 LNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDV 231
           L+ L K     M W VY++MV++ + ++I  +N++I+  C+     K +  +  ME   V
Sbjct: 189 LSLLLKLNKIKMAWFVYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGV 248

Query: 232 RADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARR 291
           + ++ TYNT+I  YC +G    A  +   M+ + + PD  TYNS I   C+E R+ EA  
Sbjct: 249 KPNVVTYNTVINGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASG 308

Query: 292 LFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLC 349
           +   +   G  PN VTY  LIDG C   DL++A   R+ M  +G+   V TYN ++  L 
Sbjct: 309 VLCKLLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALF 368

Query: 350 KEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQF 409
            E RI +A  ++ EM EK + PD VT N  IN YC+ G+   A+ + + M+E  +     
Sbjct: 369 LEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVE 428

Query: 410 TYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEF 469
           TY +LI  F K   M  A+E     +  G  P    ++ L+DG+C   N +   +LL E 
Sbjct: 429 TYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEM 488

Query: 470 VSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEP 529
            +  +  D   +  L++ +C++ KV+ A++L + M+  GI  D + Y +L   Y + G+ 
Sbjct: 489 DNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDM 548

Query: 530 KACSDILDDMYRRRLMITLKIYRSFSASYAKDNE 563
           K   ++ D+M       TL  Y +    Y+K  E
Sbjct: 549 KDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGE 582



 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 131/428 (30%), Positives = 210/428 (49%), Gaps = 21/428 (4%)

Query: 62  AFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVK 121
           A+F + E    N K S+ +   MI+IL +   +K A++ +  + +          N ++ 
Sbjct: 201 AWFVYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVI- 259

Query: 122 IHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLT 181
                  N + L             +   ++F  M+  NL P  +     ++ L K+R  
Sbjct: 260 -------NGYCLRGKF---------EAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRI 303

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
           +    V  K+++ G+V N   YN LI  CC   D+DK      EM  + + A +FTYN L
Sbjct: 304 EEASGVLCKLLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLL 363

Query: 242 I-ALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KG 298
           I AL+ +K +  EA  +   M  +G+ PD+VTYN  I+G+CR G  ++A  LF ++  K 
Sbjct: 364 IHALFLEKRIE-EAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKN 422

Query: 299 ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDAN 358
             P   TYT+LID + + N + EA    +    +G+ P ++ +N+++   C  G I  A 
Sbjct: 423 IRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAF 482

Query: 359 RLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGF 418
           +LL EM+  K+ PD VT NTL+  YC+      A K+ + M E G+  D  +Y  LI G+
Sbjct: 483 QLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGY 542

Query: 419 CKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDV 478
            K  +M  A E+   ML  GF P+  +Y+ L+ GY      +   +LL E  S+G+  D 
Sbjct: 543 SKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDD 602

Query: 479 SVYRALIR 486
           S Y  +I 
Sbjct: 603 STYLYVIE 610



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 108/364 (29%), Positives = 185/364 (50%), Gaps = 2/364 (0%)

Query: 155 QMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSS 214
            M V+ + P++     ++N        +   K++K M    +  + + YN  I   CK  
Sbjct: 242 HMEVYGVKPNVVTYNTVINGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKER 301

Query: 215 DVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYN 274
            +++   +LC++    +  +  TYN LI   C KG   +A A +D M   GI   + TYN
Sbjct: 302 RIEEASGVLCKLLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYN 361

Query: 275 SLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAK 332
            LIH    E R+ EA  + +++  KG  P+ VTY   I+GYCR  + ++AL L + M  K
Sbjct: 362 LLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEK 421

Query: 333 GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
            + P V TY S++    K  R+ +A     +  ++ + PD +  N LI+ +C  G+   A
Sbjct: 422 NIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRA 481

Query: 393 MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
            ++   M  A ++ D+ T+  L+ G+C+ ++++ AK+LL  M + G  P + SY+ L+ G
Sbjct: 482 FQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISG 541

Query: 453 YCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGD 512
           Y  + + +  L++ DE +S G    +  Y ALI+ + K  + D+A+ L   MQ  GI  D
Sbjct: 542 YSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPD 601

Query: 513 SVIY 516
              Y
Sbjct: 602 DSTY 605



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 121/432 (28%), Positives = 210/432 (48%), Gaps = 23/432 (5%)

Query: 159 HNLMPHLHACT--VLLN--SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSS 214
           H L P LH  T  V+ N  SLA++RL                V    ++++L+ A C+  
Sbjct: 117 HILQPILHTTTPTVIFNELSLARNRLN---------------VKTTLVFDLLLSAYCQFR 161

Query: 215 DVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYN 274
             D+  + L  M+  ++     T N+L++L  K      A  V + M +  I   IVT+N
Sbjct: 162 KPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWFVYEEMVKMNIKSSIVTFN 221

Query: 275 SLIHGFCREGRMREARRLF--RDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAK 332
            +I+  CREG+ ++A+      ++ G  PN VTY T+I+GYC     E A ++ + M  K
Sbjct: 222 IMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFEAASKIFKTMKDK 281

Query: 333 GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
            + P   TYNS + +LCKE RI +A+ +L ++ E  + P+ VT N LI+  C  GD   A
Sbjct: 282 NLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALIDGCCNKGDLDKA 341

Query: 393 MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
              ++ M+  G++   FTY  LIH     K ++ A++++  M + G  P   +Y+  ++G
Sbjct: 342 FAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQING 401

Query: 453 YCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGD 512
           YC   N +  L L DE V + +   V  Y +LI  F K+ ++  A+  F      G+L D
Sbjct: 402 YCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPD 461

Query: 513 SVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDL--FWS 570
            +++ +L   +   G       +L +M   +++     + +    Y ++ ++ +      
Sbjct: 462 IIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLD 521

Query: 571 HVVDRGLMSKHI 582
            + +RG+   HI
Sbjct: 522 EMKERGIKPDHI 533



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 75/306 (24%), Positives = 134/306 (43%), Gaps = 54/306 (17%)

Query: 53  CCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLST 112
           CC+   L  AF    E        S+ ++  +IH L   K  + A++M+++  +R+    
Sbjct: 332 CCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKE--MREKGVE 389

Query: 113 PSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLL 172
           P V+   ++I+                Y      +  L +FD+M   N+ P +   T L+
Sbjct: 390 PDVVTYNIQING---------------YCRCGNAKKALSLFDEMVEKNIRPTVETYTSLI 434

Query: 173 NSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVR 232
           +   K        + +KK ++ G++ +I ++N LI   C + ++D+  +LL EM+   V 
Sbjct: 435 DVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVV 494

Query: 233 ADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRL 292
            D  T+NTL+  YC++    EA  + D M+  GI PD ++YN+LI G+ + G M++A  +
Sbjct: 495 PDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEV 554

Query: 293 FRDI-------------------------------------KGATPNHVTYTTLIDGYCR 315
           F ++                                     KG TP+  TY  +I+    
Sbjct: 555 FDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYVIEAMKT 614

Query: 316 ANDLEE 321
            +DL E
Sbjct: 615 NDDLVE 620


>gi|297832060|ref|XP_002883912.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297329752|gb|EFH60171.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 623

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 144/511 (28%), Positives = 241/511 (47%), Gaps = 14/511 (2%)

Query: 78  LQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVL-SWL 136
            Q+    I +++K    KS   +L+++      S   + + LV  HD     S +L  ++
Sbjct: 103 FQTQCLAIAVVSKLSSPKSVTQLLKEVVSTRKNSVRDLFDELVLAHDRLQTKSTILFDFM 162

Query: 137 VIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGV 196
           V FY  L+M  + ++ F  M+     P    C  +L+ L++    +  W  Y  M ++ +
Sbjct: 163 VRFYCQLRMVDEAIECFYLMKEKGFDPKTETCNHILSLLSRLNRIENAWVFYADMYRMEI 222

Query: 197 VANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALA 256
            +N++ +N++I+  CK   + K +  L  ME   ++  + TYNTL+  Y  +G    A  
Sbjct: 223 KSNVYTFNIMINVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLRGRIEGARM 282

Query: 257 VQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRA 316
           +   M+ +G  PD+ TYN ++   C EGR  E  R  + I G  P+ V+Y  LI G    
Sbjct: 283 IISEMKSKGFQPDLQTYNPILSWMCNEGRASEVLREMKGI-GLVPDSVSYNILIRGCSNN 341

Query: 317 NDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTC 376
            DLE A   R+ M  +G+ P   TYN+++  L  E +I  A  L+ E+ EK I  D+VT 
Sbjct: 342 GDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTY 401

Query: 377 NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD 436
           N +IN YC+ GD   A  + + M+  G+   QFTY +LI+  C+  +   A EL   ++ 
Sbjct: 402 NIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREADELFEKVVG 461

Query: 437 AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDY 496
            G  P     + L+DG+C   N +    LL E     +  D   Y  L+R  C + K + 
Sbjct: 462 KGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKFEE 521

Query: 497 AQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSA 556
           A+ L   M+  GI  D + Y +L   Y + G+ K    + D+M       TL  Y +   
Sbjct: 522 ARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFIVRDEMLSLGFNPTLLTYNALLK 581

Query: 557 SYAKDNEILDLFWSHVVDRGLMSKHIFKEMQ 587
             +K+ +            G +++ + +EM+
Sbjct: 582 GLSKNQD------------GELAEELLREMK 600



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 127/431 (29%), Positives = 209/431 (48%), Gaps = 24/431 (5%)

Query: 52  NCCHIPSL-------SCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNML--- 101
            C HI SL         A+  +A+      K ++ +   MI++L K    K A+  L   
Sbjct: 193 TCNHILSLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIM 252

Query: 102 EKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVI--FYANLK--------MTQDGL- 150
           E   ++  + T + L     +    +G   ++S +    F  +L+        M  +G  
Sbjct: 253 ESFGIKPTIVTYNTLVQGYSLRGRIEGARMIISEMKSKGFQPDLQTYNPILSWMCNEGRA 312

Query: 151 -QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
            +V  +M+   L+P   +  +L+   + +   +  +    +MV+ G+V   + YN LIH 
Sbjct: 313 SEVLREMKGIGLVPDSVSYNILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHG 372

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
               + ++  E L+ E+  K +  D  TYN +I  YC+ G   +A A+ D M  +GI P 
Sbjct: 373 LFMENKIEAAEILIREIREKGIVLDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPT 432

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLRE 327
             TY SLI+  CR  + REA  LF  +  KG  P+ V   TL+DG+C   +++ A  L +
Sbjct: 433 QFTYTSLIYVLCRRNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLK 492

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
            M    + P  VTYN ++R LC EG+  +A  L+ EM  + I PD+++ NTLI+ Y K G
Sbjct: 493 EMDRMNIDPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKG 552

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
           DT  A  V++ ML  G      TY AL+ G  K ++ ++A+ELL  M   G  P+  S+ 
Sbjct: 553 DTKHAFIVRDEMLSLGFNPTLLTYNALLKGLSKNQDGELAEELLREMKSEGIVPNDSSFC 612

Query: 448 WLVDGYCNKNN 458
            +++     +N
Sbjct: 613 SVIEAMSKSDN 623


>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Vitis vinifera]
          Length = 718

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 161/560 (28%), Positives = 260/560 (46%), Gaps = 43/560 (7%)

Query: 57  PSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVL 116
           P ++   F+WAES  P ++ S      ++ IL +N   +SA  ++E++   +      ++
Sbjct: 95  PRMALRLFRWAESQ-PGFRRSEFVFCAILEILAQNNLMRSAYWVMERVINANM---HRIV 150

Query: 117 NALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLA 176
           + L+      + +  +L  L+  Y+   M +  L VFD+M    L P +  C  +L  L 
Sbjct: 151 DVLIGGCVSSEVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILR 210

Query: 177 KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEM---------- 226
              L     +VY+ M + G+   I  YN L+ + CK   V +   LL EM          
Sbjct: 211 DKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDV 270

Query: 227 -------------EFKDVRA------------DLFTYNTLIALYCKKGMHYEALAVQDRM 261
                        EF+  +               +TYN LI  Y  KGM  EAL++Q+ M
Sbjct: 271 TYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEM 330

Query: 262 EREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDL 319
             +G SP + TYNS I+G C+ GRM +A +   D+      P+ V+Y TLI GYCR  +L
Sbjct: 331 VLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNL 390

Query: 320 EEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTL 379
            +A  L + + +  ++P +VTYN++L  LC++G +  A +L  EM  + IAPD VT   L
Sbjct: 391 MKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTIL 450

Query: 380 INAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGF 439
           +N  CK+G  + A +  + ML  GL LD + Y   I G  K  +   A  L   ML  GF
Sbjct: 451 VNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGF 510

Query: 440 SPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQR 499
            P    Y+ +VDG C   N E   +LL + VS G+  D   Y ++I    +  ++   + 
Sbjct: 511 PPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGRE 570

Query: 500 LFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYA 559
           +F  M   G+    V YT L + +   G  +       +M  + ++  +  Y S      
Sbjct: 571 IFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLC 630

Query: 560 KDNEILDL--FWSHVVDRGL 577
           K   +     F++ +V++G+
Sbjct: 631 KVRRMDQAYNFFAEMVEKGI 650



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 111/414 (26%), Positives = 194/414 (46%), Gaps = 39/414 (9%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAK-DRLTDMVWKV 187
           +++  + L+  Y N  M  + L + ++M +    P +      +  L K  R++D + ++
Sbjct: 303 SAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQL 362

Query: 188 YKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCK 247
              M+   ++ ++  YN LI+  C+  ++ K   L  E+    +   + TYNTL+   C+
Sbjct: 363 -SDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCR 421

Query: 248 KGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI----------- 296
           +G    A  ++  M  EGI+PDIVTY  L++G C+ G +  A+  F ++           
Sbjct: 422 QGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYA 481

Query: 297 --------------------------KGATPNHVTYTTLIDGYCRANDLEEALRLREVMA 330
                                     KG  P+ + Y  ++DG C+  +LEEA  L + M 
Sbjct: 482 YATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMV 541

Query: 331 AKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTA 390
           + GV P  VTY SI+    + GR+R    +  EM  K + P  VT   LI+ +   G   
Sbjct: 542 SDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLE 601

Query: 391 SAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLV 450
            A    + M E G++ +  TY +LI+G CK + MD A      M++ G  P+  SY+ L+
Sbjct: 602 RAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILI 661

Query: 451 DGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
           +  CN  N +  L L  + + RG+  D   + AL+++  K  K+   ++L +L+
Sbjct: 662 NENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGKDCKLQAVRQLESLL 715



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 97/333 (29%), Positives = 162/333 (48%), Gaps = 2/333 (0%)

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
           ++MV  G    +  YN  I+  CK   +    + L +M   ++  D+ +YNTLI  YC+ 
Sbjct: 328 EEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRL 387

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTY 306
           G   +A  + D +    + P IVTYN+L+ G CR+G +  A++L  ++  +G  P+ VTY
Sbjct: 388 GNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTY 447

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
           T L++G C+   L  A    + M  +G+      Y + +    K G    A  L  EM  
Sbjct: 448 TILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLA 507

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
           K   PD +  N +++  CK+G+   A ++  +M+  G++ D  TY ++IH   +   +  
Sbjct: 508 KGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRK 567

Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
            +E+ + ML  G +PS  +Y+ L+ G+  K   E       E   +G+  +V  Y +LI 
Sbjct: 568 GREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLIN 627

Query: 487 RFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
             CK  ++D A   F  M   GI  +   YT L
Sbjct: 628 GLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTIL 660


>gi|334184106|ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546751|sp|P0C894.1|PP143_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At2g02150
 gi|330250459|gb|AEC05553.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 761

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 149/517 (28%), Positives = 251/517 (48%), Gaps = 43/517 (8%)

Query: 37  SLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKS 96
           +L    + +VL+ L      P L+  FFKW+ +    +KHS++S+  + HIL   + +  
Sbjct: 105 TLAPIWVPRVLVELK---EDPKLAFKFFKWSMTR-NGFKHSVESYCIVAHILFCARMYYD 160

Query: 97  AQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQM 156
           A ++L+++ L    +   V + L    +       V   L     +L M ++ +Q F +M
Sbjct: 161 ANSVLKEMVLSK--ADCDVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKM 218

Query: 157 RVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDV 216
           +   + P   +C                                   N L+H   K    
Sbjct: 219 KRFRVFPKTRSC-----------------------------------NGLLHRFAKLGKT 243

Query: 217 DKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSL 276
           D V++   +M     R  +FTYN +I   CK+G    A  + + M+  G+ PD VTYNS+
Sbjct: 244 DDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSM 303

Query: 277 IHGFCREGRMREARRLFRDIKG--ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGV 334
           I GF + GR+ +    F ++K     P+ +TY  LI+ +C+   L   L     M   G+
Sbjct: 304 IDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGL 363

Query: 335 YPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMK 394
            P VV+Y++++   CKEG ++ A +   +M    + P+  T  +LI+A CKIG+ + A +
Sbjct: 364 KPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFR 423

Query: 395 VKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYC 454
           + N ML+ G+  +  TY ALI G C A+ M  A+EL   M  AG  P+  SY+ L+ G+ 
Sbjct: 424 LGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFV 483

Query: 455 NKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSV 514
              N +  L+LL+E   RG+  D+ +Y   I   C  EK++ A+ + N M+  GI  +S+
Sbjct: 484 KAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSL 543

Query: 515 IYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIY 551
           IYT+L  AY+++G P     +LD+M    + +T+  +
Sbjct: 544 IYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTF 580



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 118/468 (25%), Positives = 217/468 (46%), Gaps = 20/468 (4%)

Query: 75  KHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLS 134
           + ++ ++  MI  + K    ++A+ + E++  R  +      N+++      DG      
Sbjct: 259 RPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMI------DG------ 306

Query: 135 WLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQL 194
                +  +    D +  F++M+     P +     L+N   K     +  + Y++M   
Sbjct: 307 -----FGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGN 361

Query: 195 GVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEA 254
           G+  N+  Y+ L+ A CK   + +  K   +M    +  + +TY +LI   CK G   +A
Sbjct: 362 GLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDA 421

Query: 255 LAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF--RDIKGATPNHVTYTTLIDG 312
             + + M + G+  ++VTY +LI G C   RM+EA  LF   D  G  PN  +Y  LI G
Sbjct: 422 FRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHG 481

Query: 313 YCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPD 372
           + +A +++ AL L   +  +G+ P ++ Y + +  LC   +I  A  ++NEM E  I  +
Sbjct: 482 FVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKAN 541

Query: 373 NVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLF 432
           ++   TL++AY K G+    + + + M E  + +   T+  LI G CK K +  A +   
Sbjct: 542 SLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFN 601

Query: 433 GML-DAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
            +  D G   +   ++ ++DG C  N  EA   L ++ V +GL  D + Y +L+    K+
Sbjct: 602 RISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQ 661

Query: 492 EKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
             V  A  L + M   G+  D + YTSL +      + +     L++M
Sbjct: 662 GNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEM 709



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 94/320 (29%), Positives = 154/320 (48%), Gaps = 2/320 (0%)

Query: 237 TYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI 296
            ++ L ++    GM  EA+    +M+R  + P   + N L+H F + G+  + +R F+D+
Sbjct: 194 VFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDM 253

Query: 297 --KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRI 354
              GA P   TY  +ID  C+  D+E A  L E M  +G+ P  VTYNS++    K GR+
Sbjct: 254 IGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRL 313

Query: 355 RDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKAL 414
            D      EM +    PD +T N LIN +CK G     ++    M   GL  +  +Y  L
Sbjct: 314 DDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTL 373

Query: 415 IHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGL 474
           +  FCK   M  A +    M   G  P+  +Y+ L+D  C   N     +L +E +  G+
Sbjct: 374 VDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGV 433

Query: 475 CVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSD 534
             +V  Y ALI   C  E++  A+ LF  M   G++ +   Y +L + + +A       +
Sbjct: 434 EWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALE 493

Query: 535 ILDDMYRRRLMITLKIYRSF 554
           +L+++  R +   L +Y +F
Sbjct: 494 LLNELKGRGIKPDLLLYGTF 513



 Score =  121 bits (304), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 97/375 (25%), Positives = 175/375 (46%), Gaps = 9/375 (2%)

Query: 134 SWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAK-DRLTDMVWKVYKKMV 192
           S LV  +    M Q  ++ +  MR   L+P+ +  T L+++  K   L+D  +++  +M+
Sbjct: 371 STLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSD-AFRLGNEML 429

Query: 193 QLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHY 252
           Q+GV  N+  Y  LI   C +  + + E+L  +M+   V  +L +YN LI  + K     
Sbjct: 430 QVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMD 489

Query: 253 EALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLI 310
            AL + + ++  GI PD++ Y + I G C   ++  A+ +  ++K  G   N + YTTL+
Sbjct: 490 RALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLM 549

Query: 311 DGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM-NEKKI 369
           D Y ++ +  E L L + M    +   VVT+  ++  LCK   +  A    N + N+  +
Sbjct: 550 DAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGL 609

Query: 370 APDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKE 429
             +      +I+  CK     +A  +  +M++ GL+ D+  Y +L+ G  K   +  A  
Sbjct: 610 QANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALA 669

Query: 430 LLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVD----VSVYRALI 485
           L   M + G      +Y+ LV G  + N  +     L+E +  G+  D    +SV +   
Sbjct: 670 LRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHY 729

Query: 486 RRFCKKEKVDYAQRL 500
              C  E V+    L
Sbjct: 730 ELGCIDEAVELQSYL 744



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 82/355 (23%), Positives = 163/355 (45%), Gaps = 20/355 (5%)

Query: 54  CHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTP 113
           C I +LS AF    E      + ++ ++  +I  L   +  K A+ +  K+     +   
Sbjct: 413 CKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNL 472

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           +  NAL  IH                +   K     L++ ++++   + P L      + 
Sbjct: 473 ASYNAL--IHG---------------FVKAKNMDRALELLNELKGRGIKPDLLLYGTFIW 515

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
            L      +    V  +M + G+ AN  +Y  L+ A  KS +  +   LL EM+  D+  
Sbjct: 516 GLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEV 575

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMERE-GISPDIVTYNSLIHGFCREGRMREARRL 292
            + T+  LI   CK  +  +A+   +R+  + G+  +   + ++I G C++ ++  A  L
Sbjct: 576 TVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTL 635

Query: 293 FRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
           F  +  KG  P+   YT+L+DG  +  ++ EAL LR+ MA  G+   ++ Y S++  L  
Sbjct: 636 FEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSH 695

Query: 351 EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLM 405
             +++ A   L EM  + I PD V C +++  + ++G    A+++++ +++  L+
Sbjct: 696 CNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMKHQLL 750



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 59/233 (25%), Positives = 103/233 (44%)

Query: 336 PGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKV 395
           PG   ++++   L   G + +A +  ++M   ++ P   +CN L++ + K+G T    + 
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 249

Query: 396 KNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCN 455
              M+ AG     FTY  +I   CK  +++ A+ L   M   G  P   +Y+ ++DG+  
Sbjct: 250 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 309

Query: 456 KNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVI 515
               +  +   +E        DV  Y ALI  FCK  K+      +  M+GNG+  + V 
Sbjct: 310 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 369

Query: 516 YTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLF 568
           Y++L  A+ + G  +       DM R  L+     Y S   +  K   + D F
Sbjct: 370 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAF 422


>gi|410109949|gb|AFV61054.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           turbinata]
          Length = 413

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 126/411 (30%), Positives = 222/411 (54%), Gaps = 3/411 (0%)

Query: 78  LQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNA-LVKIHDDPDGNSHVLSWL 136
           L S+ TMIH L  ++    A+++++ +  R    + SV+ A +++       + +V S L
Sbjct: 1   LHSYCTMIHFLCTHQMLSEAKSLIQLVVSRKGKGSASVVFATILETKGTQRSDIYVFSGL 60

Query: 137 VIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGV 196
           +  Y      +D ++ +   R H L      C  +L  L K R   +VW  Y+++++ G 
Sbjct: 61  ITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKMLEHLMKLRYFKLVWGFYEEILECGY 120

Query: 197 VANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALA 256
            A+++ +N+L+H  CK  D+   + +   +    +R  + +YNTL+  Y + G   E   
Sbjct: 121 PASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFR 180

Query: 257 VQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYC 314
           ++  M   G+ PD+ TY+ LI+G C+E +M +A  LF +  +KG  PN VT+TTLIDG+C
Sbjct: 181 LKSAMLANGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHC 240

Query: 315 RANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNV 374
           +   ++ A+ + + M ++ + P ++TYN+++  LCK G ++ A+ L++EM+ K + PD  
Sbjct: 241 KNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKNGDLKQAHDLIDEMSMKGLKPDKF 300

Query: 375 TCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGM 434
           T  TLI+  CK GD  +A K + RM++  + LD   Y ALI G C+  +   A+++L  M
Sbjct: 301 TYTTLIDGCCKEGDLDTAFKHRKRMIQENIRLDDVAYTALISGLCQEGQSVDAEKMLREM 360

Query: 435 LDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
           L  G  P   +Y+ +++ +C K +     KLL E    G    V  Y  L+
Sbjct: 361 LSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAPSVVTYNVLM 411



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 95/279 (34%), Positives = 149/279 (53%), Gaps = 2/279 (0%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           G    +  +N L+H FC++G +R A+ +F  I   G  P+ V+Y TL++GY R  DL+E 
Sbjct: 119 GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEG 178

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            RL+  M A GV P V TY+ ++  LCKE ++ DAN L +EM  K + P+ VT  TLI+ 
Sbjct: 179 FRLKSAMLANGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDG 238

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +CK G    AM++  RML   L+ D  TY  LI+G CK  ++  A +L+  M   G  P 
Sbjct: 239 HCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKNGDLKQAHDLIDEMSMKGLKPD 298

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ L+DG C + + +   K     +   + +D   Y ALI   C++ +   A+++  
Sbjct: 299 KFTYTTLIDGCCKEGDLDTAFKHRKRMIQENIRLDDVAYTALISGLCQEGQSVDAEKMLR 358

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
            M   G+  D   YT +   + + G+    S +L +M R
Sbjct: 359 EMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEMQR 397



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/139 (30%), Positives = 69/139 (49%), Gaps = 3/139 (2%)

Query: 141 ANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANI 200
            +LK   D   + D+M +  L P     T L++   K+   D  +K  K+M+Q  +  + 
Sbjct: 278 GDLKQAHD---LIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFKHRKRMIQENIRLDD 334

Query: 201 HLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDR 260
             Y  LI   C+       EK+L EM    ++ D+ TY  +I  +CKKG  ++   +   
Sbjct: 335 VAYTALISGLCQEGQSVDAEKMLREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKE 394

Query: 261 MEREGISPDIVTYNSLIHG 279
           M+R G +P +VTYN L++G
Sbjct: 395 MQRNGHAPSVVTYNVLMNG 413


>gi|255660830|gb|ACU25584.1| pentatricopeptide repeat-containing protein [Xeroaloysia
           ovatifolia]
          Length = 418

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 119/404 (29%), Positives = 221/404 (54%), Gaps = 3/404 (0%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS-VLNALVKIHDDPDGNSH 131
            ++H+L S+ TMIH+L  ++    A+++++ +  R    + S V  A+++       + +
Sbjct: 8   TFRHTLDSYCTMIHLLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIY 67

Query: 132 VLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKM 191
           V S L+  Y      +D ++ +   R H        C  +L  L K +   +VW  Y+++
Sbjct: 68  VFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEI 127

Query: 192 VQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMH 251
           ++ G  A+++ +N+L+H  CK  D+   + +   +    +R  + ++NTL+  Y + G  
Sbjct: 128 LECGYPASLYFFNILMHKFCKDGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDL 187

Query: 252 YEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTL 309
            E   ++  M   G+ PD+ TY+ LI+G C+E +M +A  LF ++  KG  PN VT+TTL
Sbjct: 188 DEGFRLKTAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTL 247

Query: 310 IDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI 369
           IDG+C+   ++ A+ + + M ++ + P ++TYN+++  LC++G ++ A  L++EM+ K +
Sbjct: 248 IDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCRKGDLKQARDLIDEMSMKGL 307

Query: 370 APDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKE 429
            PD +T  TLI+  CK GD  +A + + RM++  + LD   Y ALI G C+      A++
Sbjct: 308 KPDKITYTTLIDGXCKEGDLETAFEHRKRMIQENIQLDDVGYTALISGLCQEGRYLDAEK 367

Query: 430 LLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
           +L  ML  G  P   +Y+ +++ +C K +     KLL E    G
Sbjct: 368 VLREMLSVGLKPDTITYTMIINEFCKKGDVWTGSKLLKEMQRDG 411



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 92/279 (32%), Positives = 152/279 (54%), Gaps = 2/279 (0%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           G    +  +N L+H FC++G +R A+ +F  I   G  P+ V++ TL++GY R  DL+E 
Sbjct: 131 GYPASLYFFNILMHKFCKDGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEG 190

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            RL+  M A GV P V TY+ ++  LCKE ++ DAN L +EM +K + P+ VT  TLI+ 
Sbjct: 191 FRLKTAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDG 250

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +CK G    AM++  +ML   L  D  TY  LI+G C+  ++  A++L+  M   G  P 
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCRKGDLKQARDLIDEMSMKGLKPD 310

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ L+DG C + + E   +     +   + +D   Y ALI   C++ +   A+++  
Sbjct: 311 KITYTTLIDGXCKEGDLETAFEHRKRMIQENIQLDDVGYTALISGLCQEGRYLDAEKVLR 370

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
            M   G+  D++ YT +   + + G+    S +L +M R
Sbjct: 371 EMLSVGLKPDTITYTMIINEFCKKGDVWTGSKLLKEMQR 409



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 92/327 (28%), Positives = 151/327 (46%), Gaps = 40/327 (12%)

Query: 232 RADLFTYNTLIALYCKKGMHYEALA-VQDRMEREGISP-----------------DIVTY 273
           R  L +Y T+I L C   M  EA + +Q  + R+G                    DI  +
Sbjct: 10  RHTLDSYCTMIHLLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVF 69

Query: 274 NSLIHGFCREGRMREA---RRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMA 330
           + LI  +   G +R+A    RL R+ K   P            CR   LE  ++L+    
Sbjct: 70  SGLITAYLESGFLRDAIECYRLTREHKFWVPFDT---------CRKV-LEHLMKLKYFKL 119

Query: 331 AKGVYPGVVT---------YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
             G Y  ++          +N ++ K CK+G IR A  + N + +  + P  V+ NTL+N
Sbjct: 120 VWGFYEEILECGYPASLYFFNILMHKFCKDGDIRVAQSVFNAITKWGLRPSVVSFNTLMN 179

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
            Y ++GD     ++K  M  +G+  D +TY  LI+G CK  +MD A EL   MLD G  P
Sbjct: 180 GYIRLGDLDEGFRLKTAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVP 239

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
           +  +++ L+DG+C     +  +++  + +S+ L  D+  Y  LI   C+K  +  A+ L 
Sbjct: 240 NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCRKGDLKQARDLI 299

Query: 502 NLMQGNGILGDSVIYTSLAYAYWRAGE 528
           + M   G+  D + YT+L     + G+
Sbjct: 300 DEMSMKGLKPDKITYTTLIDGXCKEGD 326



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 82/272 (30%), Positives = 134/272 (49%), Gaps = 8/272 (2%)

Query: 108 DFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHA 167
           D     SV NA+ K    P   S   + L+  Y  L    +G ++   M    + P ++ 
Sbjct: 151 DIRVAQSVFNAITKWGLRPSVVS--FNTLMNGYIRLGDLDEGFRLKTAMHASGVQPDVYT 208

Query: 168 CTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEME 227
            +VL+N L K+   D   +++ +M+  G+V N   +  LI   CK+  VD   ++  +M 
Sbjct: 209 YSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQML 268

Query: 228 FKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMR 287
            + +  DL TYNTLI   C+KG   +A  + D M  +G+ PD +TY +LI G C+EG + 
Sbjct: 269 SQSLSPDLITYNTLIYGLCRKGDLKQARDLIDEMSMKGLKPDKITYTTLIDGXCKEGDLE 328

Query: 288 EA----RRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNS 343
            A    +R+ ++      + V YT LI G C+     +A ++   M + G+ P  +TY  
Sbjct: 329 TAFEHRKRMIQE--NIQLDDVGYTALISGLCQEGRYLDAEKVLREMLSVGLKPDTITYTM 386

Query: 344 ILRKLCKEGRIRDANRLLNEMNEKKIAPDNVT 375
           I+ + CK+G +   ++LL EM      P  VT
Sbjct: 387 IINEFCKKGDVWTGSKLLKEMQRDGQMPSVVT 418



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/317 (22%), Positives = 129/317 (40%), Gaps = 20/317 (6%)

Query: 272 TYNSLIHGFCREGRMREARRLFR-------------------DIKGATPNHV-TYTTLID 311
           +Y ++IH  C    + EA+ L +                   + KG   + +  ++ LI 
Sbjct: 15  SYCTMIHLLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLIT 74

Query: 312 GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAP 371
            Y  +  L +A+    +      +    T   +L  L K    +       E+ E     
Sbjct: 75  AYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPA 134

Query: 372 DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
                N L++ +CK GD   A  V N + + GL     ++  L++G+ +  ++D    L 
Sbjct: 135 SLYFFNILMHKFCKDGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLK 194

Query: 432 FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
             M  +G  P   +YS L++G C ++  +   +L DE + +GL  +   +  LI   CK 
Sbjct: 195 TAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKN 254

Query: 492 EKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIY 551
            +VD A  ++  M    +  D + Y +L Y   R G+ K   D++D+M  + L      Y
Sbjct: 255 GRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCRKGDLKQARDLIDEMSMKGLKPDKITY 314

Query: 552 RSFSASYAKDNEILDLF 568
            +      K+ ++   F
Sbjct: 315 TTLIDGXCKEGDLETAF 331


>gi|15240249|ref|NP_200948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171473|sp|Q9FLJ4.1|PP440_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g61400
 gi|9757861|dbj|BAB08495.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010079|gb|AED97462.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 654

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 149/489 (30%), Positives = 246/489 (50%), Gaps = 12/489 (2%)

Query: 63  FFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALR-DFLSTPS-----VL 116
            F+ +  +  +  + LQS   +IH+LT    +  A+ +++ +  R    S PS     + 
Sbjct: 60  LFETSSRSRVSKSNDLQSFSAVIHVLTGAHKYTLARCLIKSLIERLKRHSEPSNMSHRLF 119

Query: 117 NALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLA 176
           NAL  I   P  +  V S L++ +  + + ++ L V  +M+     P   AC  +LN L 
Sbjct: 120 NALEDIQS-PKFSIGVFSLLIMEFLEMGLFEEALWVSREMKCS---PDSKACLSILNGLV 175

Query: 177 KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLF 236
           + R  D VW  Y+ M+  G+V ++H+Y VL   C K     K EKLL EM    ++ +++
Sbjct: 176 RRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVY 235

Query: 237 TYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI 296
            Y   I   C+     EA  + + M++ G+ P++ TY+++I G+C+ G +R+A  L+++I
Sbjct: 236 IYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEI 295

Query: 297 KGAT--PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRI 354
             A   PN V + TL+DG+C+A +L  A  L   M   GV P +  YN ++   CK G +
Sbjct: 296 LVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNM 355

Query: 355 RDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKAL 414
            +A  LL+EM    ++PD  T   LIN  C     A A ++  +M    +     TY +L
Sbjct: 356 LEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSL 415

Query: 415 IHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGL 474
           IHG+CK   M+ A +L   M  +G  P+  ++S L+DGYCN  + +A + L  E   +G+
Sbjct: 416 IHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGI 475

Query: 475 CVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSD 534
             DV  Y ALI    K+  +  A RL++ M   GI  +   +  L   +W+ G      D
Sbjct: 476 VPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAID 535

Query: 535 ILDDMYRRR 543
              +  ++R
Sbjct: 536 FYQENNQQR 544



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 106/362 (29%), Positives = 180/362 (49%), Gaps = 2/362 (0%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N +  S ++  Y      +    ++ ++ V  L+P++     L++   K R       ++
Sbjct: 268 NLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLF 327

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
             MV+ GV  N+++YN LIH  CKS ++ +   LL EME  ++  D+FTY  LI   C +
Sbjct: 328 VHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIE 387

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTY 306
               EA  +  +M+ E I P   TYNSLIHG+C+E  M +A  L  ++   G  PN +T+
Sbjct: 388 DQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITF 447

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
           +TLIDGYC   D++ A+ L   M  KG+ P VVTY +++    KE  +++A RL ++M E
Sbjct: 448 STLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLE 507

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
             I P++ T   L++ + K G  + A+       +     +   +  LI G C+   +  
Sbjct: 508 AGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILR 567

Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
           A      M   G +P  CSY  ++ G+  +      + L  + +  G+  ++ V + L R
Sbjct: 568 ASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLVNQLLAR 627

Query: 487 RF 488
            +
Sbjct: 628 FY 629



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/328 (26%), Positives = 142/328 (43%), Gaps = 39/328 (11%)

Query: 107 RDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLH 166
           R+ ++  S+   +VK   DP  N +V + L+  +       + + +  +M   NL P + 
Sbjct: 318 RELVTARSLFVHMVKFGVDP--NLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVF 375

Query: 167 ACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEM 226
             T+L+N L  +       ++++KM    +  +   YN LIH  CK  ++++   L  EM
Sbjct: 376 TYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEM 435

Query: 227 EFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRM 286
               V  ++ T++TLI  YC       A+ +   M  +GI PD+VTY +LI    +E  M
Sbjct: 436 TASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANM 495

Query: 287 REARRLFRDI--KGATPN-----------------------------------HVTYTTL 309
           +EA RL+ D+   G  PN                                   HV +T L
Sbjct: 496 KEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCL 555

Query: 310 IDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI 369
           I+G C+   +  A R    M + G+ P + +Y S+L+   +E RI D   L  +M +  I
Sbjct: 556 IEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGI 615

Query: 370 APDNVTCNTLINAYCKIGDTASAMKVKN 397
            P+ +    L   Y   G   SA  + N
Sbjct: 616 LPNLLVNQLLARFYQANGYVKSACFLTN 643


>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
 gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
          Length = 717

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 136/412 (33%), Positives = 219/412 (53%), Gaps = 5/412 (1%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG-VVANIHLYNV 205
           ++ + V   MR     P+      L+ +  +    D   +V   M + G    N+  +N 
Sbjct: 169 EEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNS 228

Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
           +++  CK+  ++   K+  EM  + +  D+ +YNTL++ YCK G  +E+LAV   M + G
Sbjct: 229 MVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRG 288

Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEAL 323
           + PD+VT+ SLIH  C+ G + +A  L   ++  G   N VT+T LIDG+C+   L++AL
Sbjct: 289 LVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDAL 348

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
              E M   G+ P VV YN+++   CK GR+  A  L+ EM  K++ PD VT +T+I+ Y
Sbjct: 349 LAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGY 408

Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY 443
           CK+G+  SA ++  +ML+ G++ D  TY +LI G C+ K ++ A EL   ML  G  P  
Sbjct: 409 CKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDE 468

Query: 444 CSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNL 503
            +Y+ L+DG+C + N E  L L DE + +G+  DV  Y  LI    K  +   A RL   
Sbjct: 469 FTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFK 528

Query: 504 MQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITL-KIYRSF 554
           +     + D++ Y +L     +A E K+   +L     + LM    K+Y+S 
Sbjct: 529 LYHEDPVPDNIKYDALMLCCSKA-EFKSVVALLKGFCMKGLMKEADKVYQSM 579



 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 119/392 (30%), Positives = 207/392 (52%), Gaps = 4/392 (1%)

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
           P + A   +L +L+   L     +    M++ GV  N++ YN+L+ A C    +++   +
Sbjct: 116 PSVPAYNAVLLALSDASLPS-ARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGV 174

Query: 223 LCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG-ISPDIVTYNSLIHGFC 281
           + +M       +  TYNTL+A +C+ G    A  V   M  EG   P++VT+NS+++G C
Sbjct: 175 VGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLC 234

Query: 282 REGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVV 339
           + GRM  AR++F ++  +G  P+ V+Y TL+ GYC+   L E+L +   M  +G+ P VV
Sbjct: 235 KAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVV 294

Query: 340 TYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRM 399
           T+ S++   CK G +  A  L+ +M E+ +  + VT   LI+ +CK G    A+     M
Sbjct: 295 TFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEM 354

Query: 400 LEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNE 459
            + G+      Y ALI+G+CK   MD+A+EL+  M      P   +YS ++ GYC   N 
Sbjct: 355 RKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNL 414

Query: 460 EALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
           ++  +L  + + +G+  D   Y +LIR  C++++++ A  LF  M   G+  D   YT+L
Sbjct: 415 DSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTL 474

Query: 520 AYAYWRAGEPKACSDILDDMYRRRLMITLKIY 551
              + + G  +    + D+M R+ ++  +  Y
Sbjct: 475 IDGHCKEGNVEKALSLHDEMIRKGVLPDVVTY 506



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 129/407 (31%), Positives = 205/407 (50%), Gaps = 19/407 (4%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           +VFD+M    L P + +   LL+   K         V+ +M Q G+V ++  +  LIHA 
Sbjct: 244 KVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHAT 303

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           CK+ ++++   L+ +M  + +R +  T+  LI  +CKKG   +AL   + M + GI P +
Sbjct: 304 CKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSV 363

Query: 271 VTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
           V YN+LI+G+C+ GRM  AR L R++  K   P+ VTY+T+I GYC+  +L+ A +L + 
Sbjct: 364 VCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQK 423

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M  KGV P  +TY+S++R LC+E R+ DA  L   M +  + PD  T  TLI+ +CK G+
Sbjct: 424 MLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGN 483

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
              A+ + + M+  G++ D  TY  LI+G  K+     A  LLF +      P    Y  
Sbjct: 484 VEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDA 543

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLC----------------VDVSVYRALIRRFCKKE 492
           L+   C+K   ++++ LL  F  +GL                 +D SVY  LI   C+  
Sbjct: 544 LML-CCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGG 602

Query: 493 KVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
            V  A      M  +G   +S    SL    +  G      + + D+
Sbjct: 603 NVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDL 649



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 141/469 (30%), Positives = 226/469 (48%), Gaps = 52/469 (11%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALR----DFLSTPSVLNALVKI---HDD 125
           N K +L +  +M++ L K    + A+ + +++       D +S  ++L+   K+   H+ 
Sbjct: 218 NAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHES 277

Query: 126 -------------PDGNSHVLSWLVIFYANLKMT--QDGLQVFDQMRVHNLMPHLHACTV 170
                        PD    V+++  + +A  K    +  + +  QMR   L  +    T 
Sbjct: 278 LAVFSEMTQRGLVPD----VVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTA 333

Query: 171 LLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKD 230
           L++   K    D      ++M + G+  ++  YN LI+  CK   +D   +L+ EME K 
Sbjct: 334 LIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKR 393

Query: 231 VRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREAR 290
           V+ D+ TY+T+I+ YCK G    A  +  +M ++G+ PD +TY+SLI G C E R+ +A 
Sbjct: 394 VKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDAC 453

Query: 291 RLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
            LF ++   G  P+  TYTTLIDG+C+  ++E+AL L + M  KGV P VVTY+ ++  L
Sbjct: 454 ELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGL 513

Query: 349 CKEGRIRDANRLLNEMNEKKIAPDNVT-------CN--------TLINAYCKIGDTASAM 393
            K  R ++A+RLL ++  +   PDN+        C+         L+  +C  G    A 
Sbjct: 514 SKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEAD 573

Query: 394 KVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGY 453
           KV   ML+    LD   Y  LIHG C+   +  A      ML +GFSP+  S   LV G 
Sbjct: 574 KVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGL 633

Query: 454 CNKNNEEALLKLLDEFVSRGLC----VDVSVYRALIRRFCKKEKVDYAQ 498
                EE ++   D  +   L      D    +ALI    +KE +DY Q
Sbjct: 634 F----EEGMVVEADNAIQDLLTCCPLADAEASKALI-DLNRKEGMDYFQ 677



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 169/309 (54%), Gaps = 3/309 (0%)

Query: 261 MEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGA--TPNHVTYTTLIDGYCRAND 318
           M R G++P++ TYN L+   C  GR+ EA  +  D++GA   PN VTY TL+  +CRA +
Sbjct: 143 MLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 202

Query: 319 LEEALRLREVMAAKG-VYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCN 377
           L+ A R+  +M  +G   P +VT+NS++  LCK GR+  A ++ +EM  + +APD V+ N
Sbjct: 203 LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 262

Query: 378 TLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA 437
           TL++ YCK+G    ++ V + M + GL+ D  T+ +LIH  CKA  ++ A  L+  M + 
Sbjct: 263 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 322

Query: 438 GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYA 497
           G   +  +++ L+DG+C K   +  L  ++E    G+   V  Y ALI  +CK  ++D A
Sbjct: 323 GLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLA 382

Query: 498 QRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSAS 557
           + L   M+   +  D V Y+++   Y + G   +   +   M ++ ++     Y S    
Sbjct: 383 RELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRG 442

Query: 558 YAKDNEILD 566
             ++  + D
Sbjct: 443 LCEEKRLND 451



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 72/231 (31%), Positives = 116/231 (50%), Gaps = 2/231 (0%)

Query: 298 GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDA 357
           G  P+   Y  ++     A+ L  A R    M   GV P V TYN ++R LC  GR+ +A
Sbjct: 113 GYAPSVPAYNAVLLALSDAS-LPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171

Query: 358 NRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAG-LMLDQFTYKALIH 416
             ++ +M     AP+ VT NTL+ A+C+ G+   A +V + M E G    +  T+ ++++
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVN 231

Query: 417 GFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCV 476
           G CKA  M+ A+++   M+  G +P   SY+ L+ GYC        L +  E   RGL  
Sbjct: 232 GLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVP 291

Query: 477 DVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
           DV  + +LI   CK   ++ A  L   M+  G+  + V +T+L   + + G
Sbjct: 292 DVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKG 342



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 64/297 (21%), Positives = 120/297 (40%), Gaps = 39/297 (13%)

Query: 40  STAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSA-- 97
           S   +  L+N Y  C +  +  A     E      K  + ++ T+I    K  +  SA  
Sbjct: 362 SVVCYNALINGY--CKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQ 419

Query: 98  --QNMLEKIALRDFLSTPSVLNAL----------------VKIHDDPDGNSHVLSWLVIF 139
             Q ML+K  L D ++  S++  L                +++   PD  ++  + L+  
Sbjct: 420 LNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTY--TTLIDG 477

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
           +      +  L + D+M    ++P +   +VL+N L+K   T    ++  K+     V +
Sbjct: 478 HCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPD 537

Query: 200 IHLYNVLIHAC---------------CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIAL 244
              Y+ L+  C               C    + + +K+   M  ++ + D   Y+ LI  
Sbjct: 538 NIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHG 597

Query: 245 YCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGATP 301
           +C+ G   +AL+   +M R G SP+  +  SL+ G   EG + EA    +D+    P
Sbjct: 598 HCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLTCCP 654


>gi|410109897|gb|AFV61028.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           macropoda]
          Length = 412

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 124/410 (30%), Positives = 222/410 (54%), Gaps = 3/410 (0%)

Query: 79  QSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS-VLNALVKIHDDPDGNSHVLSWLV 137
            S+ TMIH L   +    A+++++ +  R    + S V  A+V+       + +V S L+
Sbjct: 1   HSYCTMIHFLCTQQMLSEAKSLIQVVVSRKGKGSASAVFAAIVETKGTQRSDLYVFSGLI 60

Query: 138 IFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVV 197
             Y      +D ++ +   R H        C  +L  L K +   +VW  Y+++++ G  
Sbjct: 61  TAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYP 120

Query: 198 ANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAV 257
           A+++ +N+L+H  CK  D+   + +   +    +R  + +YNTL+  Y + G   E   +
Sbjct: 121 ASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL 180

Query: 258 QDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCR 315
           +  M   G+ PD+ TY+ LI+G C+E +M +A  LF +  +KG  PN VT+TTLIDG+C+
Sbjct: 181 KSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCK 240

Query: 316 ANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVT 375
              ++ A+ + + M ++ + P ++TYN+++  LCK+G ++ A+ L++EM+ K++ PD +T
Sbjct: 241 NGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKELKPDKIT 300

Query: 376 CNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGML 435
             TLI+  CK GD  SA + + RM++  + LD+  Y ALI G C+      A+++L  ML
Sbjct: 301 YTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREML 360

Query: 436 DAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
           + G  P   +Y+ +++ +C K +     KLL E    G    V  Y  L+
Sbjct: 361 NVGLKPDSRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLM 410



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 93/279 (33%), Positives = 148/279 (53%), Gaps = 2/279 (0%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           G    +  +N L+H FC++G +R A+ +F  I   G  P+ V+Y TL++GY R  DL+E 
Sbjct: 118 GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEG 177

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            RL+  M A GV P V TY+ ++  LCKE ++ DAN L +EM  K + P+ VT  TLI+ 
Sbjct: 178 FRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDG 237

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +CK G    AM++  +ML   L  D  TY  LI+G CK  ++  A  L+  M      P 
Sbjct: 238 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKELKPD 297

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ L+DG C + + ++  +     +   + +D   Y ALI   C++ +   A+++  
Sbjct: 298 KITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLR 357

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
            M   G+  DS  YT +   + + G+    S +L +M R
Sbjct: 358 EMLNVGLKPDSRTYTMIINEFCKKGDVWKGSKLLKEMQR 396



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 84/319 (26%), Positives = 147/319 (46%), Gaps = 34/319 (10%)

Query: 237 TYNTLIALYCKKGMHYEALA-VQDRMEREGISP-----------------DIVTYNSLIH 278
           +Y T+I   C + M  EA + +Q  + R+G                    D+  ++ LI 
Sbjct: 2   SYCTMIHFLCTQQMLSEAKSLIQVVVSRKGKGSASAVFAAIVETKGTQRSDLYVFSGLIT 61

Query: 279 GFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGV 338
            +   G +R+A   +R     T  H  +       CR   LE  ++L+      G Y  +
Sbjct: 62  AYLESGFLRDAIECYR----LTREHKFWVPF--DTCRKV-LEHLMKLKYFKLVWGFYEEI 114

Query: 339 VT---------YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
           +          +N ++ + CK+G IR A  + + + +  + P  V+ NTL+N Y ++GD 
Sbjct: 115 LECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDL 174

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
               ++K+ ML +G+  D +TY  LI+G CK  +MD A EL   ML  G  P+  +++ L
Sbjct: 175 DEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTL 234

Query: 450 VDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGI 509
           +DG+C     +  +++  + +S+ L  D+  Y  LI   CKK  +  A  L + M    +
Sbjct: 235 IDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKEL 294

Query: 510 LGDSVIYTSLAYAYWRAGE 528
             D + YT+L     + G+
Sbjct: 295 KPDKITYTTLIDGCCKEGD 313



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 66/293 (22%), Positives = 123/293 (41%), Gaps = 20/293 (6%)

Query: 272 TYNSLIHGFCREGRMREARRLFR-------------------DIKGATPNHV-TYTTLID 311
           +Y ++IH  C +  + EA+ L +                   + KG   + +  ++ LI 
Sbjct: 2   SYCTMIHFLCTQQMLSEAKSLIQVVVSRKGKGSASAVFAAIVETKGTQRSDLYVFSGLIT 61

Query: 312 GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAP 371
            Y  +  L +A+    +      +    T   +L  L K    +       E+ E     
Sbjct: 62  AYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPA 121

Query: 372 DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
                N L++ +CK GD   A  V + + + GL     +Y  L++G+ +  ++D    L 
Sbjct: 122 SLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLK 181

Query: 432 FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
             ML +G  P   +YS L++G C ++  +   +L DE + +GL  +   +  LI   CK 
Sbjct: 182 SAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKN 241

Query: 492 EKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL 544
            +VD A  ++  M    +  D + Y +L Y   + G+ K    ++D+M  + L
Sbjct: 242 GRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKEL 294



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 64/129 (49%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
            + D+M +  L P     T L++   K+   D  ++  K+M+Q  +  +   Y  LI   
Sbjct: 284 HLIDEMSMKELKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGL 343

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           C+       EK+L EM    ++ D  TY  +I  +CKKG  ++   +   M+R+G  P +
Sbjct: 344 CQEGRSVDAEKMLREMLNVGLKPDSRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSV 403

Query: 271 VTYNSLIHG 279
           VTYN L++G
Sbjct: 404 VTYNVLMNG 412


>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
          Length = 694

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 136/412 (33%), Positives = 219/412 (53%), Gaps = 5/412 (1%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG-VVANIHLYNV 205
           ++ + V   MR     P+      L+ +  +    D   +V   M + G    N+  +N 
Sbjct: 169 EEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNS 228

Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
           +++  CK+  ++   K+  EM  + +  D+ +YNTL++ YCK G  +E+LAV   M + G
Sbjct: 229 MVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRG 288

Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEAL 323
           + PD+VT+ SLIH  C+ G + +A  L   ++  G   N VT+T LIDG+C+   L++AL
Sbjct: 289 LVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDAL 348

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
              E M   G+ P VV YN+++   CK GR+  A  L+ EM  K++ PD VT +T+I+ Y
Sbjct: 349 LAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGY 408

Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY 443
           CK+G+  SA ++  +ML+ G++ D  TY +LI G C+ K ++ A EL   ML  G  P  
Sbjct: 409 CKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDE 468

Query: 444 CSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNL 503
            +Y+ L+DG+C + N E  L L DE + +G+  DV  Y  LI    K  +   A RL   
Sbjct: 469 FTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFK 528

Query: 504 MQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITL-KIYRSF 554
           +     + D++ Y +L     +A E K+   +L     + LM    K+Y+S 
Sbjct: 529 LYHEDPVPDNIKYDALMLCCSKA-EFKSVVALLKGFCMKGLMKEADKVYQSM 579



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 119/392 (30%), Positives = 207/392 (52%), Gaps = 4/392 (1%)

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
           P + A   +L +L+   L     +    M++ GV  N++ YN+L+ A C    +++   +
Sbjct: 116 PSVPAYNAVLLALSDASLPS-ARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGV 174

Query: 223 LCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG-ISPDIVTYNSLIHGFC 281
           + +M       +  TYNTL+A +C+ G    A  V   M  EG   P++VT+NS+++G C
Sbjct: 175 VGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLC 234

Query: 282 REGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVV 339
           + GRM  AR++F ++  +G  P+ V+Y TL+ GYC+   L E+L +   M  +G+ P VV
Sbjct: 235 KAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVV 294

Query: 340 TYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRM 399
           T+ S++   CK G +  A  L+ +M E+ +  + VT   LI+ +CK G    A+     M
Sbjct: 295 TFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEM 354

Query: 400 LEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNE 459
            + G+      Y ALI+G+CK   MD+A+EL+  M      P   +YS ++ GYC   N 
Sbjct: 355 RKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNL 414

Query: 460 EALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
           ++  +L  + + +G+  D   Y +LIR  C++++++ A  LF  M   G+  D   YT+L
Sbjct: 415 DSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTL 474

Query: 520 AYAYWRAGEPKACSDILDDMYRRRLMITLKIY 551
              + + G  +    + D+M R+ ++  +  Y
Sbjct: 475 IDGHCKEGNVEKALSLHDEMIRKGVLPDVVTY 506



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 101/314 (32%), Positives = 172/314 (54%), Gaps = 6/314 (1%)

Query: 261 MEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGA--TPNHVTYTTLIDGYCRAND 318
           M R G++P++ TYN L+   C  GR+ EA  +  D++GA   PN VTY TL+  +CRA +
Sbjct: 143 MLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 202

Query: 319 LEEALRLREVMAAKG-VYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCN 377
           L+ A R+  +M  +G   P +VT+NS++  LCK GR+  A ++ +EM  + +APD V+ N
Sbjct: 203 LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 262

Query: 378 TLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA 437
           TL++ YCK+G    ++ V + M + GL+ D  T+ +LIH  CKA  ++ A  L+  M + 
Sbjct: 263 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 322

Query: 438 GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYA 497
           G   +  +++ L+DG+C K   +  L  ++E    G+   V  Y ALI  +CK  ++D A
Sbjct: 323 GLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLA 382

Query: 498 QRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSAS 557
           + L   M+   +  D V Y+++   Y + G   +   +   M ++ ++     Y S    
Sbjct: 383 RELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRG 442

Query: 558 YAKD---NEILDLF 568
             ++   N+  +LF
Sbjct: 443 LCEEKRLNDACELF 456



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 125/454 (27%), Positives = 194/454 (42%), Gaps = 95/454 (20%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           +VFD+M    L P + +   LL+   K         V+ +M Q G+V ++  +  LIHA 
Sbjct: 244 KVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHAT 303

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISP-- 268
           CK+ ++++   L+ +M  + +R +  T+  LI  +CKKG   +AL   + M + GI P  
Sbjct: 304 CKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSV 363

Query: 269 ---------------------------------DIVTYNSLIHGFCREG----------- 284
                                            D+VTY+++I G+C+ G           
Sbjct: 364 VCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQK 423

Query: 285 ------------------------RMREARRLFRDI--KGATPNHVTYTTLIDGYCRAND 318
                                   R+ +A  LF ++   G  P+  TYTTLIDG+C+  +
Sbjct: 424 MLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGN 483

Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVT--- 375
           +E+AL L + M  KGV P VVTY+ ++  L K  R ++A+RLL ++  +   PDN+    
Sbjct: 484 VEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDA 543

Query: 376 ----CN--------TLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
               C+         L+  +C  G    A KV   ML+    LD   Y  LIHG C+   
Sbjct: 544 LMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGN 603

Query: 424 MDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLC----VDVS 479
           +  A      ML +GFSP+  S   LV G      EE ++   D  +   L      D  
Sbjct: 604 VRKALSFHKQMLRSGFSPNSTSTISLVRGLF----EEGMVVEADNAIQDLLTCCPLADAE 659

Query: 480 VYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDS 513
             +ALI    K+  VD    +   M  +G+L  S
Sbjct: 660 ASKALIDLNRKEGNVDALIDVLCGMARDGLLPSS 693



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 72/231 (31%), Positives = 116/231 (50%), Gaps = 2/231 (0%)

Query: 298 GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDA 357
           G  P+   Y  ++     A+ L  A R    M   GV P V TYN ++R LC  GR+ +A
Sbjct: 113 GYAPSVPAYNAVLLALSDAS-LPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171

Query: 358 NRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAG-LMLDQFTYKALIH 416
             ++ +M     AP+ VT NTL+ A+C+ G+   A +V + M E G    +  T+ ++++
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVN 231

Query: 417 GFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCV 476
           G CKA  M+ A+++   M+  G +P   SY+ L+ GYC        L +  E   RGL  
Sbjct: 232 GLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVP 291

Query: 477 DVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
           DV  + +LI   CK   ++ A  L   M+  G+  + V +T+L   + + G
Sbjct: 292 DVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKG 342



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 69/285 (24%), Positives = 138/285 (48%), Gaps = 22/285 (7%)

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           L+  Y  L       ++  +M    + P +   + +++   K    D  +++ +KM++ G
Sbjct: 369 LINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKG 428

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
           V+ +   Y+ LI   C+   ++   +L   M    V+ D FTY TLI  +CK+G   +AL
Sbjct: 429 VLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKAL 488

Query: 256 AVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGY 313
           ++ D M R+G+ PD+VTY+ LI+G  +  R +EA RL   +  +   P+++ Y  L+   
Sbjct: 489 SLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALM--- 545

Query: 314 CRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDN 373
                         +  +K  +  VV   ++L+  C +G +++A+++   M ++    D 
Sbjct: 546 --------------LCCSKAEFKSVV---ALLKGFCMKGLMKEADKVYQSMLDRNWKLDG 588

Query: 374 VTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGF 418
              + LI+ +C+ G+   A+    +ML +G   +  +  +L+ G 
Sbjct: 589 SVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGL 633



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/289 (24%), Positives = 130/289 (44%), Gaps = 17/289 (5%)

Query: 134 SWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQ 193
           S ++  Y  +       Q+  +M    ++P     + L+  L +++  +   ++++ M+Q
Sbjct: 402 STIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQ 461

Query: 194 LGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYE 253
           LGV  +   Y  LI   CK  +V+K   L  EM  K V  D+ TY+ LI    K     E
Sbjct: 462 LGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKE 521

Query: 254 ALAVQDRMEREGISPDIVTYN---------------SLIHGFCREGRMREARRLFRDI-- 296
           A  +  ++  E   PD + Y+               +L+ GFC +G M+EA ++++ +  
Sbjct: 522 AHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLD 581

Query: 297 KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRD 356
           +    +   Y+ LI G+CR  ++ +AL   + M   G  P   +  S++R L +EG + +
Sbjct: 582 RNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVE 641

Query: 357 ANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLM 405
           A+  + ++       D      LI+   K G+  + + V   M   GL+
Sbjct: 642 ADNAIQDLLTCCPLADAEASKALIDLNRKEGNVDALIDVLCGMARDGLL 690


>gi|410109879|gb|AFV61019.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
           macrostachya]
          Length = 414

 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 122/412 (29%), Positives = 224/412 (54%), Gaps = 3/412 (0%)

Query: 77  SLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS-VLNALVKIHDDPDGNSHVLSW 135
           +L S+ TMIH L  ++    A+++++ +  R    + S V  A+++       + +V S 
Sbjct: 1   TLDSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSG 60

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           L+  Y      +D ++ +   R H        C  +L  + K +   +VW  Y+++++ G
Sbjct: 61  LITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHMMKLKYFKLVWGFYEEILECG 120

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
             A+++ +N+L+H  CK  D+   + +   +    +R  + ++NTL+  Y + G   E  
Sbjct: 121 YPASLYFFNILMHRFCKEGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGF 180

Query: 256 AVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGY 313
            ++  M   G+ PD+ TY+ LI+G C+E +M +A  LF ++  KG  PN VT+TTLIDG+
Sbjct: 181 RLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGH 240

Query: 314 CRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDN 373
           C++  ++ A+ + + M ++ + P ++TYN+++  LCK+G ++ A+ L++EM+ K + PD 
Sbjct: 241 CKSGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDK 300

Query: 374 VTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFG 433
           +T  TLI+  CK GD  +A + + RM++  + LD   Y ALI G C+      A+++L  
Sbjct: 301 ITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAEKVLRE 360

Query: 434 MLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
           ML AG  P   +Y+ +++ +C K +     KLL E    G    V  Y  L+
Sbjct: 361 MLSAGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNVLM 412



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 94/279 (33%), Positives = 150/279 (53%), Gaps = 2/279 (0%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           G    +  +N L+H FC+EG +R A+ +F  I   G  P+ V++ TL++GY R  DL+E 
Sbjct: 120 GYPASLYFFNILMHRFCKEGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEG 179

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            RL+  M A GV P V TY+ ++  LCKE ++ DAN L +EM +K + P+ VT  TLI+ 
Sbjct: 180 FRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDG 239

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +CK G    AM++  +ML   L  D  TY  LI+G CK  ++  A +L+  M   G  P 
Sbjct: 240 HCKSGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPD 299

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ L+DG C + + E   +     +   + +D   Y ALI   C++ +   A+++  
Sbjct: 300 KITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAEKVLR 359

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
            M   G+  D+  YT +   + + G+    S +L +M R
Sbjct: 360 EMLSAGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQR 398



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 86/330 (26%), Positives = 152/330 (46%), Gaps = 17/330 (5%)

Query: 247 KKGMHYEALAVQDRMEREGIS-PDIVTYNSLIHGFCREGRMREARRLFRDIKGATPNHVT 305
           +KG    +      +E +G    DI  ++ LI  +   G +R+A   +R     T  H  
Sbjct: 31  RKGKGSASAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYR----LTREHKF 86

Query: 306 YTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVT---------YNSILRKLCKEGRIRD 356
           +       CR   LE  ++L+      G Y  ++          +N ++ + CKEG IR 
Sbjct: 87  WVPF--DTCRKV-LEHMMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKEGDIRV 143

Query: 357 ANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIH 416
           A  + N + +  + P  V+ NTL+N Y ++GD     ++K+ M  +G+  D +TY  LI+
Sbjct: 144 AQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLIN 203

Query: 417 GFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCV 476
           G CK  +MD A EL   MLD G  P+  +++ L+DG+C     +  +++  + +S+ L  
Sbjct: 204 GLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKSGRVDLAMEIYKQMLSQSLSP 263

Query: 477 DVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDIL 536
           D+  Y  LI   CKK  +  A  L + M   G+  D + YT+L     + G+ +   +  
Sbjct: 264 DLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLETAFEHR 323

Query: 537 DDMYRRRLMITLKIYRSFSASYAKDNEILD 566
             M +  + +    Y +  +   ++   LD
Sbjct: 324 KRMIQENIRLDDVAYTALISGLCQEGRYLD 353



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 92/369 (24%), Positives = 156/369 (42%), Gaps = 36/369 (9%)

Query: 232 RADLFTYNTLIALYCKKGMHYEALAVQDRMEREG---ISPDI----------VTYNSLIH 278
           R+D++ ++ LI  Y + G   +A+    R+ RE    +  D           + Y  L+ 
Sbjct: 52  RSDIYVFSGLITAYLESGFLRDAIECY-RLTREHKFWVPFDTCRKVLEHMMKLKYFKLVW 110

Query: 279 GFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGV 338
           GF  E  + E         G   +   +  L+  +C+  D+  A  +   +   G+ P V
Sbjct: 111 GFYEE--ILEC--------GYPASLYFFNILMHRFCKEGDIRVAQSVFNAITKWGLRPSV 160

Query: 339 VTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNR 398
           V++N+++    + G + +  RL + M+   + PD  T + LIN  CK      A ++ + 
Sbjct: 161 VSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDE 220

Query: 399 MLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNN 458
           ML+ GL+ +  T+  LI G CK+  +D+A E+   ML    SP   +Y+ L+ G C K +
Sbjct: 221 MLDKGLVPNGVTFTTLIDGHCKSGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGD 280

Query: 459 EEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTS 518
            +    L+DE   +GL  D   Y  LI   CK+  ++ A      M    I  D V YT+
Sbjct: 281 LKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTA 340

Query: 519 LAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLM 578
           L     + G       +L +M    L      Y      + K  ++    W+        
Sbjct: 341 LISGLCQEGRYLDAEKVLREMLSAGLKPDTGTYTMIINEFCKKGDV----WT-------- 388

Query: 579 SKHIFKEMQ 587
              + KEMQ
Sbjct: 389 GSKLLKEMQ 397



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 65/293 (22%), Positives = 122/293 (41%), Gaps = 20/293 (6%)

Query: 272 TYNSLIHGFCREGRMREARRLFR-------------------DIKGATPNHV-TYTTLID 311
           +Y ++IH  C    + EA+ L +                   + KG   + +  ++ LI 
Sbjct: 4   SYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLIT 63

Query: 312 GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAP 371
            Y  +  L +A+    +      +    T   +L  + K    +       E+ E     
Sbjct: 64  AYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHMMKLKYFKLVWGFYEEILECGYPA 123

Query: 372 DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
                N L++ +CK GD   A  V N + + GL     ++  L++G+ +  ++D    L 
Sbjct: 124 SLYFFNILMHRFCKEGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLK 183

Query: 432 FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
             M  +G  P   +YS L++G C ++  +   +L DE + +GL  +   +  LI   CK 
Sbjct: 184 SAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKS 243

Query: 492 EKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL 544
            +VD A  ++  M    +  D + Y +L Y   + G+ K   D++D+M  + L
Sbjct: 244 GRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGL 296



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/139 (28%), Positives = 67/139 (48%), Gaps = 3/139 (2%)

Query: 141 ANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANI 200
            +LK   D   + D+M +  L P     T L++   K+   +  ++  K+M+Q  +  + 
Sbjct: 279 GDLKQAHD---LIDEMSMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDD 335

Query: 201 HLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDR 260
             Y  LI   C+       EK+L EM    ++ D  TY  +I  +CKKG  +    +   
Sbjct: 336 VAYTALISGLCQEGRYLDAEKVLREMLSAGLKPDTGTYTMIINEFCKKGDVWTGSKLLKE 395

Query: 261 MEREGISPDIVTYNSLIHG 279
           M+R+G  P +VTYN L++G
Sbjct: 396 MQRDGHVPSVVTYNVLMNG 414


>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
          Length = 1078

 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 161/560 (28%), Positives = 260/560 (46%), Gaps = 43/560 (7%)

Query: 57  PSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVL 116
           P ++   F+WAES  P ++ S      ++ IL +N   +SA  ++E++   +      ++
Sbjct: 95  PRMALRLFRWAESQ-PGFRRSEFVFCAILEILAQNNLMRSAYWVMERVINANM---HRIV 150

Query: 117 NALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLA 176
           + L+      + +  +L  L+  Y+   M +  L VFD+M    L P +  C  +L  L 
Sbjct: 151 DVLIGGCVSSEVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILR 210

Query: 177 KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEM---------- 226
              L     +VY+ M + G+   I  YN L+ + CK   V +   LL EM          
Sbjct: 211 DKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDV 270

Query: 227 -------------EFKDVRA------------DLFTYNTLIALYCKKGMHYEALAVQDRM 261
                        EF+  +               +TYN LI  Y  KGM  EAL++Q+ M
Sbjct: 271 TYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEM 330

Query: 262 EREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDL 319
             +G SP + TYNS I+G C+ GRM +A +   D+      P+ V+Y TLI GYCR  +L
Sbjct: 331 VLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNL 390

Query: 320 EEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTL 379
            +A  L + + +  ++P +VTYN++L  LC++G +  A +L  EM  + IAPD VT   L
Sbjct: 391 MKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTIL 450

Query: 380 INAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGF 439
           +N  CK+G  + A +  + ML  GL LD + Y   I G  K  +   A  L   ML  GF
Sbjct: 451 VNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGF 510

Query: 440 SPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQR 499
            P    Y+ +VDG C   N E   +LL + VS G+  D   Y ++I    +  ++   + 
Sbjct: 511 PPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGRE 570

Query: 500 LFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYA 559
           +F  M   G+    V YT L + +   G  +       +M  + ++  +  Y S      
Sbjct: 571 IFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLC 630

Query: 560 KDNEILDL--FWSHVVDRGL 577
           K   +     F++ +V++G+
Sbjct: 631 KVRRMDQAYNFFAEMVEKGI 650



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 108/393 (27%), Positives = 182/393 (46%), Gaps = 39/393 (9%)

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAK-DRLTDMVWKVYKKMVQL 194
           L+  Y N  M  + L + ++M +    P +      +  L K  R++D + ++   M+  
Sbjct: 310 LIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQL-SDMLAN 368

Query: 195 GVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEA 254
            ++ ++  YN LI+  C+  ++ K   L  E+    +   + TYNTL+   C++G    A
Sbjct: 369 NLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVA 428

Query: 255 LAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI------------------ 296
             ++  M  EGI+PDIVTY  L++G C+ G +  A+  F ++                  
Sbjct: 429 QQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVG 488

Query: 297 -------------------KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPG 337
                              KG  P+ + Y  ++DG C+  +LEEA  L + M + GV P 
Sbjct: 489 ELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPD 548

Query: 338 VVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKN 397
            VTY SI+    + GR+R    +  EM  K + P  VT   LI+ +   G    A    +
Sbjct: 549 YVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFS 608

Query: 398 RMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKN 457
            M E G++ +  TY +LI+G CK + MD A      M++ G  P+  SY+ L++  CN  
Sbjct: 609 EMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMG 668

Query: 458 NEEALLKLLDEFVSRGLCVDVSVYRALIRRFCK 490
           N +  L L  + + RG+  D   + AL+++  K
Sbjct: 669 NWQEALSLYKQMLDRGVQPDSCTHSALLKQLGK 701



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 97/333 (29%), Positives = 162/333 (48%), Gaps = 2/333 (0%)

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
           ++MV  G    +  YN  I+  CK   +    + L +M   ++  D+ +YNTLI  YC+ 
Sbjct: 328 EEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRL 387

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTY 306
           G   +A  + D +    + P IVTYN+L+ G CR+G +  A++L  ++  +G  P+ VTY
Sbjct: 388 GNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTY 447

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
           T L++G C+   L  A    + M  +G+      Y + +    K G    A  L  EM  
Sbjct: 448 TILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLA 507

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
           K   PD +  N +++  CK+G+   A ++  +M+  G++ D  TY ++IH   +   +  
Sbjct: 508 KGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRK 567

Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
            +E+ + ML  G +PS  +Y+ L+ G+  K   E       E   +G+  +V  Y +LI 
Sbjct: 568 GREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLIN 627

Query: 487 RFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
             CK  ++D A   F  M   GI  +   YT L
Sbjct: 628 GLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTIL 660



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 67/236 (28%), Positives = 122/236 (51%), Gaps = 2/236 (0%)

Query: 122 IHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLT 181
           +H+  + +S+  +  ++    L  T     + ++M      P L    V+++ L K    
Sbjct: 471 LHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNL 530

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
           +   ++ +KMV  GV+ +   Y  +IHA  ++  + K  ++  EM  K +   + TY  L
Sbjct: 531 EEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVL 590

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGA 299
           I  +  KG    A      M+ +GI P+++TYNSLI+G C+  RM +A   F ++  KG 
Sbjct: 591 IHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGI 650

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIR 355
            PN  +YT LI+  C   + +EAL L + M  +GV P   T++++L++L K+ +++
Sbjct: 651 FPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGKDCKLQ 706


>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
          Length = 1393

 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 131/385 (34%), Positives = 209/385 (54%), Gaps = 3/385 (0%)

Query: 146 TQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNV 205
           T D  Q+FDQM   ++ P+L A   +L++L K         +  K++Q G+  N+  YN+
Sbjct: 167 THDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNI 226

Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
            I   C++  + +  +L+  M    V  D+ TYNTLI   CKK M  EA+    RM  +G
Sbjct: 227 WIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQG 285

Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEAL 323
             PD  TYN++I G+C+   ++EA  L +D   KG  P+ VTY +LI+G C   D+E AL
Sbjct: 286 CLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERAL 345

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
            L     AKG+ P +V YNS+++ LC +G I  A +++NEM E+   PD  T N +IN  
Sbjct: 346 ELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGL 405

Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY 443
           CK+G+ + A  V N  +  G + D FT+  LI G+CK  ++D A +L+  M + G +P  
Sbjct: 406 CKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDT 465

Query: 444 CSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNL 503
            +Y+ +++G C       + +   E + +G   +   Y  LI  FC+  K++ A ++   
Sbjct: 466 ITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVK 525

Query: 504 MQGNGILGDSVIYTSLAYAYWRAGE 528
           M   G+  D+V + +L Y + R G+
Sbjct: 526 MSQEGLHPDAVSFNTLIYGFCRNGD 550



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 114/355 (32%), Positives = 181/355 (50%), Gaps = 2/355 (0%)

Query: 145 MTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYN 204
           M Q+ +    +M     +P       +++   K  +     ++ K  V  G V +   Y 
Sbjct: 270 MPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYC 329

Query: 205 VLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMERE 264
            LI+  C   DV++  +L  E + K ++ D+  YN+L+   C +G+   AL V + M  E
Sbjct: 330 SLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEE 389

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEA 322
           G  PDI TYN +I+G C+ G + +A  +  D  +KG  P+  T+ TLIDGYC+   L+ A
Sbjct: 390 GCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSA 449

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
           L+L E M   G+ P  +TYNS+L  LCK G++ + N    EM  K   P+ +T N LI  
Sbjct: 450 LQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIEN 509

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +C+      A KV  +M + GL  D  ++  LI+GFC+  +++ A  L   + + G+S +
Sbjct: 510 FCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSAT 569

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYA 497
             +++ L+  +  K N     K+ DE +S+G   D   YR LI   CK   VD A
Sbjct: 570 ADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRA 624



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 93/391 (23%), Positives = 155/391 (39%), Gaps = 69/391 (17%)

Query: 238 YNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSL--------------------- 276
           Y   I  Y + G   +A+   +RM+     P    YN++                     
Sbjct: 53  YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRML 112

Query: 277 --------------IHGFCREGRMREARRLFRDI--KGAT-------------------- 300
                         +  FC   R   A RL R +  +GA                     
Sbjct: 113 AAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQ 172

Query: 301 -----------PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLC 349
                      PN   +  ++   C+  D+ EA  L   +  +G+   + TYN  +R LC
Sbjct: 173 LFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLC 232

Query: 350 KEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQF 409
           + GR+ +A RL++ M    + PD VT NTLI   CK      AM    RM+  G + D F
Sbjct: 233 EAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDF 291

Query: 410 TYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEF 469
           TY  +I G+CK   +  A ELL   +  GF P   +Y  L++G C + + E  L+L +E 
Sbjct: 292 TYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEA 351

Query: 470 VSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEP 529
            ++G+  D+ VY +L++  C +  + +A ++ N M   G   D   Y  +     + G  
Sbjct: 352 QAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNI 411

Query: 530 KACSDILDDMYRRRLMITLKIYRSFSASYAK 560
              + +++D   +  +  +  + +    Y K
Sbjct: 412 SDATVVMNDAIMKGYLPDVFTFNTLIDGYCK 442



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 120/236 (50%), Gaps = 4/236 (1%)

Query: 149 GLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIH 208
            LQ+ ++M  + + P       +LN L K    + V + +++M+  G   N   YN+LI 
Sbjct: 449 ALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIE 508

Query: 209 ACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISP 268
             C+S+ +++  K++ +M  + +  D  ++NTLI  +C+ G    A  +  ++E +G S 
Sbjct: 509 NFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSA 568

Query: 269 DIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLR 326
              T+N+LI  F  +  M  A ++F ++  KG   +  TY  LIDG C+  +++ A    
Sbjct: 569 TADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHL 628

Query: 327 EVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
             M  KG  P + T+  ++  L    R+  A  +++ M +  + P+ V  +T++NA
Sbjct: 629 VEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEVV--DTILNA 682



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 73/317 (23%), Positives = 108/317 (34%), Gaps = 100/317 (31%)

Query: 303 HVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLN 362
           H  Y   I  Y RA  L +A+   E M      P    YN+I+  L        A+++  
Sbjct: 50  HPLYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYV 109

Query: 363 EMNEKKIAPDNVTCNTLIN------------------------AYCKI-------GDTAS 391
            M    ++PD  T    +                         AYC +       G T  
Sbjct: 110 RMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHD 169

Query: 392 AMKVKNRM-------------------------LEAGLMLDQ----------FTYKALIH 416
           A ++ ++M                         LEAGL+L +          FTY   I 
Sbjct: 170 ARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIR 229

Query: 417 GFCKAKEMDIAKELLFG----------------------------------MLDAGFSPS 442
           G C+A  +  A  L+ G                                  M++ G  P 
Sbjct: 230 GLCEAGRLPEAVRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPD 289

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ ++DGYC  +  +   +LL + V +G   D   Y +LI   C +  V+ A  LFN
Sbjct: 290 DFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFN 349

Query: 503 LMQGNGILGDSVIYTSL 519
             Q  GI  D V+Y SL
Sbjct: 350 EAQAKGIKPDIVVYNSL 366


>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
          Length = 1380

 Score =  232 bits (591), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 131/385 (34%), Positives = 209/385 (54%), Gaps = 3/385 (0%)

Query: 146 TQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNV 205
           T D  Q+FDQM   ++ P+L A   +L++L K         +  K++Q G+  N+  YN+
Sbjct: 168 THDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNI 227

Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
            I   C++  + +  +L+  M    V  D+ TYNTLI   CKK M  EA+    RM  +G
Sbjct: 228 WIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQG 286

Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEAL 323
             PD  TYN++I G+C+   ++EA  L +D   KG  P+ VTY +LI+G C   D+E AL
Sbjct: 287 CLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERAL 346

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
            L     AKG+ P +V YNS+++ LC +G I  A +++NEM E+   PD  T N +IN  
Sbjct: 347 ELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGL 406

Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY 443
           CK+G+ + A  V N  +  G + D FT+  LI G+CK  ++D A +L+  M + G +P  
Sbjct: 407 CKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDT 466

Query: 444 CSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNL 503
            +Y+ +++G C       + +   E + +G   +   Y  LI  FC+  K++ A ++   
Sbjct: 467 ITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVK 526

Query: 504 MQGNGILGDSVIYTSLAYAYWRAGE 528
           M   G+  D+V + +L Y + R G+
Sbjct: 527 MSQEGLHPDAVSFNTLIYGFCRNGD 551



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 114/355 (32%), Positives = 181/355 (50%), Gaps = 2/355 (0%)

Query: 145 MTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYN 204
           M Q+ +    +M     +P       +++   K  +     ++ K  V  G V +   Y 
Sbjct: 271 MPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYC 330

Query: 205 VLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMERE 264
            LI+  C   DV++  +L  E + K ++ D+  YN+L+   C +G+   AL V + M  E
Sbjct: 331 SLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEE 390

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEA 322
           G  PDI TYN +I+G C+ G + +A  +  D  +KG  P+  T+ TLIDGYC+   L+ A
Sbjct: 391 GCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSA 450

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
           L+L E M   G+ P  +TYNS+L  LCK G++ + N    EM  K   P+ +T N LI  
Sbjct: 451 LQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIEN 510

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +C+      A KV  +M + GL  D  ++  LI+GFC+  +++ A  L   + + G+S +
Sbjct: 511 FCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSAT 570

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYA 497
             +++ L+  +  K N     K+ DE +S+G   D   YR LI   CK   VD A
Sbjct: 571 ADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRA 625



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 93/391 (23%), Positives = 155/391 (39%), Gaps = 69/391 (17%)

Query: 238 YNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSL--------------------- 276
           Y   I  Y + G   +A+   +RM+     P    YN++                     
Sbjct: 54  YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRML 113

Query: 277 --------------IHGFCREGRMREARRLFRDI--KGAT-------------------- 300
                         +  FC   R   A RL R +  +GA                     
Sbjct: 114 AAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQ 173

Query: 301 -----------PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLC 349
                      PN   +  ++   C+  D+ EA  L   +  +G+   + TYN  +R LC
Sbjct: 174 LFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLC 233

Query: 350 KEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQF 409
           + GR+ +A RL++ M    + PD VT NTLI   CK      AM    RM+  G + D F
Sbjct: 234 EAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDF 292

Query: 410 TYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEF 469
           TY  +I G+CK   +  A ELL   +  GF P   +Y  L++G C + + E  L+L +E 
Sbjct: 293 TYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEA 352

Query: 470 VSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEP 529
            ++G+  D+ VY +L++  C +  + +A ++ N M   G   D   Y  +     + G  
Sbjct: 353 QAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNI 412

Query: 530 KACSDILDDMYRRRLMITLKIYRSFSASYAK 560
              + +++D   +  +  +  + +    Y K
Sbjct: 413 SDATVVMNDAIMKGYLPDVFTFNTLIDGYCK 443



 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 120/236 (50%), Gaps = 4/236 (1%)

Query: 149 GLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIH 208
            LQ+ ++M  + + P       +LN L K    + V + +++M+  G   N   YN+LI 
Sbjct: 450 ALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIE 509

Query: 209 ACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISP 268
             C+S+ +++  K++ +M  + +  D  ++NTLI  +C+ G    A  +  ++E +G S 
Sbjct: 510 NFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSA 569

Query: 269 DIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLR 326
              T+N+LI  F  +  M  A ++F ++  KG   +  TY  LIDG C+  +++ A    
Sbjct: 570 TADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHL 629

Query: 327 EVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
             M  KG  P + T+  ++  L    R+  A  +++ M +  + P+ V  +T++NA
Sbjct: 630 VEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEVV--DTILNA 683



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 73/317 (23%), Positives = 108/317 (34%), Gaps = 100/317 (31%)

Query: 303 HVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLN 362
           H  Y   I  Y RA  L +A+   E M      P    YN+I+  L        A+++  
Sbjct: 51  HPLYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYV 110

Query: 363 EMNEKKIAPDNVTCNTLIN------------------------AYCKI-------GDTAS 391
            M    ++PD  T    +                         AYC +       G T  
Sbjct: 111 RMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHD 170

Query: 392 AMKVKNRM-------------------------LEAGLMLDQ----------FTYKALIH 416
           A ++ ++M                         LEAGL+L +          FTY   I 
Sbjct: 171 ARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIR 230

Query: 417 GFCKAKEMDIAKELLFG----------------------------------MLDAGFSPS 442
           G C+A  +  A  L+ G                                  M++ G  P 
Sbjct: 231 GLCEAGRLPEAVRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPD 290

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ ++DGYC  +  +   +LL + V +G   D   Y +LI   C +  V+ A  LFN
Sbjct: 291 DFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFN 350

Query: 503 LMQGNGILGDSVIYTSL 519
             Q  GI  D V+Y SL
Sbjct: 351 EAQAKGIKPDIVVYNSL 367


>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 1011

 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 153/593 (25%), Positives = 289/593 (48%), Gaps = 13/593 (2%)

Query: 2   ASLVALNSDTKFIKTISAIMLKGHWAKLL-NPNIASSLTSTAIHKVLLNLYNCCHIPSLS 60
           +S  AL  +   ++ I+ ++   +W  L+ + +I   L +  I  V+L   N    P   
Sbjct: 15  SSSQALTQNEDSVREITTLLNSHNWQALMESSDIPKKLNTDIIRSVILQ--NQVGDPKRL 72

Query: 61  CAFFKWAES--AVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNA 118
             FF W++        +  L     +   L  +  +  A +++ K  +R+  S  +VL +
Sbjct: 73  LNFFYWSQHKMGTSTAQQDLDVLSALAVNLCNSNWYGPASDLI-KCIIRNSDSPLAVLGS 131

Query: 119 LVKIHDDPDG--NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLA 176
           +VK +   +G  NS +   L+  Y  +    + + VF   +     P L +C  LL  L 
Sbjct: 132 IVKCYRSCNGSPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLL 191

Query: 177 KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLF 236
           K    ++ WKV+  M    V+ +++ Y  +I A CK  +V   +++L EM  K    +L 
Sbjct: 192 KGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLV 251

Query: 237 TYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI 296
           TYN +I   C+  +  EA+ ++  M  +G+ PD+ TY+ LI+GFC E R REA+ +  ++
Sbjct: 252 TYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEM 311

Query: 297 --KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRI 354
              G  P  +TY  LIDG+ R  D+E+A R+++ M A G+   ++ +N++L  +CK G++
Sbjct: 312 IDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKM 371

Query: 355 RDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKAL 414
             A  ++ EM EK + PD+ T + LI  +C+  + A A ++ + M +  L     TY  +
Sbjct: 372 EKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVI 431

Query: 415 IHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGL 474
           I+G C+   +     +L  M+  G  P+   Y+ L+  +  +   E    +L+    +G+
Sbjct: 432 INGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGI 491

Query: 475 CVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSD 534
             DV  Y +LI  FCK ++++ A+     M    +  ++  Y +    Y +AGE +    
Sbjct: 492 LPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADR 551

Query: 535 ILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKEMQ 587
             ++M    ++  + IY +    + K+  + + F    V R ++S+ + +++Q
Sbjct: 552 YFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAF---SVFRFILSRRVLQDVQ 601



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 121/421 (28%), Positives = 214/421 (50%), Gaps = 2/421 (0%)

Query: 146 TQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNV 205
            +D  +V  +M      P+L    V++  L + RL D   ++ + MV  G+V +++ Y++
Sbjct: 231 VKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDI 290

Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
           LI+  C      + + +L EM    ++ +  TYN LI  + ++G   +A  ++D M   G
Sbjct: 291 LINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACG 350

Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEAL 323
           I  +++ +N+L++G C+ G+M +A  + +++  KG  P+  TY+ LI+G+CR  ++  A 
Sbjct: 351 IEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAF 410

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
            L + M  + + P V+TY+ I+  LC+ G ++  N +L EM    + P+ V   TL+ A+
Sbjct: 411 ELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAH 470

Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY 443
            K G    +  +  RM E G++ D F Y +LI GFCKAK M+ A+  L  ML+    P+ 
Sbjct: 471 AKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNA 530

Query: 444 CSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNL 503
            +Y   +DGY      E   +  +E +S G+  +V +Y ALI   CK+  V  A  +F  
Sbjct: 531 HTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRF 590

Query: 504 MQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNE 563
           +    +L D   Y+ L +   R G+      I  ++  + L+     Y S  +   K   
Sbjct: 591 ILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGN 650

Query: 564 I 564
           +
Sbjct: 651 V 651



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 128/449 (28%), Positives = 220/449 (48%), Gaps = 36/449 (8%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N+H     +  Y+     +   + F++M    ++P++   T L+    K+      + V+
Sbjct: 529 NAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVF 588

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
           + ++   V+ ++  Y+VLIH   ++  + +   +  E++ K +  + FTYN+LI+  CK+
Sbjct: 589 RFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQ 648

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTY 306
           G   +A  + + M  +GI+PDIVTYN LI G C+ G +  A+ LF DI  +G TPN VTY
Sbjct: 649 GNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTY 708

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYP------------------------------ 336
             ++DGYC++ +   A +L E M  +GV P                              
Sbjct: 709 AAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLE 768

Query: 337 ----GVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
                 V++N+++   CK G++++AN LL EM EK+  P++VT  +LI+  CK G    A
Sbjct: 769 KGFASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEA 828

Query: 393 MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
            ++   M E  +M    TY +L+HG+     M     L   M+  G  P   +Y  ++D 
Sbjct: 829 KRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDA 888

Query: 453 YCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGD 512
           YC + N     KL DE + +G+ + V+ Y ALI+  CKKE+     +L N +  +G    
Sbjct: 889 YCREGNVMEACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLG 948

Query: 513 SVIYTSLAYAYWRAGEPKACSDILDDMYR 541
               + +A  +  AG     +++L  M +
Sbjct: 949 LPTCSVIARGFQIAGNMDEAAEVLRSMVK 977



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 133/480 (27%), Positives = 236/480 (49%), Gaps = 21/480 (4%)

Query: 115 VLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNS 174
           ++  +++   +PD  S   S L+  +   +      ++ D+M+   L P +   +V++N 
Sbjct: 377 IMQEMMEKGVEPD--SQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIING 434

Query: 175 LAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRAD 234
           L +         + ++MV  G+  N  +Y  L+ A  K   V++   +L  M  + +  D
Sbjct: 435 LCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPD 494

Query: 235 LFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR 294
           +F YN+LI  +CK     EA      M    + P+  TY + I G+ + G M  A R F 
Sbjct: 495 VFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFN 554

Query: 295 DIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEG 352
           ++   G  PN   YT LI+G+C+  ++ EA  +   + ++ V   V TY+ ++  L + G
Sbjct: 555 EMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNG 614

Query: 353 RIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYK 412
           ++ +A  + +E+ EK + P+  T N+LI+  CK G+   A ++   M   G+  D  TY 
Sbjct: 615 KMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYN 674

Query: 413 ALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSR 472
            LI G CKA E++ AK L   +   G +P+  +Y+ +VDGYC   N  A  +LL+E + R
Sbjct: 675 ILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLR 734

Query: 473 GLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKAC 532
           G+  D  +Y  ++   CK+EK + A  LF  M   G    +V + +L   Y ++G+ +  
Sbjct: 735 GVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKG-FASTVSFNTLIEGYCKSGKLQEA 793

Query: 533 SDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLM--SKHIFKEMQLRN 590
           + +L++M          I + F  ++     ++D    H    G+M  +K ++ EMQ RN
Sbjct: 794 NHLLEEM----------IEKQFIPNHVTYTSLID----HNCKAGMMGEAKRLWLEMQERN 839



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 114/435 (26%), Positives = 204/435 (46%), Gaps = 3/435 (0%)

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           L+I +   K  ++      +M    L P+ H     ++  +K    ++  + + +M+  G
Sbjct: 501 LIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCG 560

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
           V+ N+ +Y  LI   CK  +V +   +   +  + V  D+ TY+ LI    + G  +EA 
Sbjct: 561 VLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAF 620

Query: 256 AVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGY 313
            +   ++ +G+ P+  TYNSLI G C++G + +A +L  +  IKG  P+ VTY  LIDG 
Sbjct: 621 GIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGL 680

Query: 314 CRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDN 373
           C+A ++E A  L + +  +G+ P  VTY +++   CK      A +LL EM  + + PD 
Sbjct: 681 CKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDA 740

Query: 374 VTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFG 433
              N ++N  CK      A+ +   MLE G      ++  LI G+CK+ ++  A  LL  
Sbjct: 741 FIYNVILNFCCKEEKFEKALDLFQEMLEKGFA-STVSFNTLIEGYCKSGKLQEANHLLEE 799

Query: 434 MLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEK 493
           M++  F P++ +Y+ L+D  C         +L  E   R +      Y +L+  +     
Sbjct: 800 MIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGN 859

Query: 494 VDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRS 553
           +     LF  M   GI  D + Y  +  AY R G       + D++  + + +++  Y +
Sbjct: 860 MSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDA 919

Query: 554 FSASYAKDNEILDLF 568
              +  K  E  ++ 
Sbjct: 920 LIQALCKKEEFFEVL 934



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 109/400 (27%), Positives = 186/400 (46%), Gaps = 20/400 (5%)

Query: 76  HSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSW 135
             +Q++  +IH L++N     A  +  ++  +  L      N+L+       GN    S 
Sbjct: 598 QDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLIS-GSCKQGNVDKAS- 655

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
                          Q+ ++M +  + P +    +L++ L K    +    ++  +   G
Sbjct: 656 ---------------QLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRG 700

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
           +  N   Y  ++   CKS +     +LL EM  + V  D F YN ++   CK+    +AL
Sbjct: 701 LTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKAL 760

Query: 256 AVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGY 313
            +   M  +G +   V++N+LI G+C+ G+++EA  L  ++  K   PNHVTYT+LID  
Sbjct: 761 DLFQEMLEKGFA-STVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHN 819

Query: 314 CRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDN 373
           C+A  + EA RL   M  + V P   TY S+L      G + + + L  EM  K I PD 
Sbjct: 820 CKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDK 879

Query: 374 VTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFG 433
           +T   +I+AYC+ G+   A K+K+ +L  G+ +    Y ALI   CK +E     +LL  
Sbjct: 880 MTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNE 939

Query: 434 MLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
           + ++GF     + S +  G+    N +   ++L   V  G
Sbjct: 940 IGESGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFG 979


>gi|255660818|gb|ACU25578.1| pentatricopeptide repeat-containing protein [Junellia uniflora]
          Length = 418

 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 117/404 (28%), Positives = 220/404 (54%), Gaps = 3/404 (0%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS-VLNALVKIHDDPDGNSH 131
            ++H+LQS+ TMIH L  ++    A+ +++ +  R    + S V  A+++       + +
Sbjct: 8   TFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIY 67

Query: 132 VLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKM 191
           V S L+  Y      +D ++ +   + H        C  +L  L K +   +VW  Y++ 
Sbjct: 68  VFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEES 127

Query: 192 VQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMH 251
           ++ G  A+++ +N+L+H+ CK  ++   + +   +    +R  + ++NTL+  Y K G  
Sbjct: 128 LECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDL 187

Query: 252 YEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTL 309
            E   +++ M+  G+ PD+ TY+ LI+G C+E ++ +A  LF ++   G  PN V++TTL
Sbjct: 188 NEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKLDDANELFDEMLDNGLVPNSVSFTTL 247

Query: 310 IDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI 369
           IDG+C+   ++ A+ + + M ++ + P ++TYN+++  LCK G ++ A  L+NEM+ K +
Sbjct: 248 IDGHCKDGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKNGDLKQAQDLINEMSMKGL 307

Query: 370 APDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKE 429
            PD +T  TLI+  CK GD  +A + + RM++  + LD   Y ALI G C+      A++
Sbjct: 308 KPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEK 367

Query: 430 LLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
           +L  ML  G  P   +Y+ +++ +C K +     KL+ E    G
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDG 411



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 89/279 (31%), Positives = 149/279 (53%), Gaps = 2/279 (0%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           G    +  +N L+H FC+EG +R A+ +F  I   G  P+ V++ TL++GY +  DL E 
Sbjct: 131 GYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEG 190

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            RL+  M A GV P V TY+ ++  LCKE ++ DAN L +EM +  + P++V+  TLI+ 
Sbjct: 191 FRLKNAMQASGVQPDVYTYSVLINGLCKESKLDDANELFDEMLDNGLVPNSVSFTTLIDG 250

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +CK G    AM++  +ML   L  D  TY  LI+G CK  ++  A++L+  M   G  P 
Sbjct: 251 HCKDGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKNGDLKQAQDLINEMSMKGLKPD 310

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ L+DG C + + E   +     +   + +D   Y ALI   C++ +   A+++  
Sbjct: 311 KITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLR 370

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
            M   G+  +   YT +   + + G+    S ++ +M R
Sbjct: 371 EMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQR 409



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 97/344 (28%), Positives = 156/344 (45%), Gaps = 45/344 (13%)

Query: 232 RADLFTYNTLIALYCKKGMHYEALA-VQDRMEREGISP-----------------DIVTY 273
           R  L +Y T+I   C   M  EA   +Q  + R+G                    DI  +
Sbjct: 10  RHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVF 69

Query: 274 NSLIHGFCREGRMREARRLFRDIKGATPNH---VTYTTLIDGYCRANDLEEALRLREVMA 330
           + LI  +   G +R+A   +R     T  H   V + T     CR   LE  ++L+    
Sbjct: 70  SGLITAYLESGFLRDAIECYR----LTKEHKFRVPFDT-----CR-KVLEHLMKLKYFKL 119

Query: 331 AKGVY---------PGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
             G Y           +  +N ++   CKEG IR A  + + + +  + P  V+ NTL+N
Sbjct: 120 VWGFYEESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMN 179

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
            Y K+GD     ++KN M  +G+  D +TY  LI+G CK  ++D A EL   MLD G  P
Sbjct: 180 GYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKLDDANELFDEMLDNGLVP 239

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
           +  S++ L+DG+C     +  +++  + +S+ L  D+  Y  LI   CK   +  AQ L 
Sbjct: 240 NSVSFTTLIDGHCKDGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKNGDLKQAQDLI 299

Query: 502 NLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
           N M   G+  D + YT+L     + G+ +   +     YR+R++
Sbjct: 300 NEMSMKGLKPDKITYTTLIDGSCKEGDLETAFE-----YRKRMI 338



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 85/318 (26%), Positives = 149/318 (46%), Gaps = 31/318 (9%)

Query: 66  WAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKI---ALR-DFLSTPSVLNALVK 121
           + ES    Y  SL     ++H   K    + AQ++ + I    LR   +S  +++N  +K
Sbjct: 124 YEESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIK 183

Query: 122 IHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLT 181
           + D                       +G ++ + M+   + P ++  +VL+N L K+   
Sbjct: 184 LGD---------------------LNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKL 222

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
           D   +++ +M+  G+V N   +  LI   CK   VD   ++  +M  + +  DL TYNTL
Sbjct: 223 DDANELFDEMLDNGLVPNSVSFTTLIDGHCKDGRVDLAMEIYKQMLSQSLSPDLITYNTL 282

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA----RRLFRDIK 297
           I   CK G   +A  + + M  +G+ PD +TY +LI G C+EG +  A    +R+ ++  
Sbjct: 283 IYGLCKNGDLKQAQDLINEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKE-- 340

Query: 298 GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDA 357
               + V YT LI G C+     +A ++   M + G+ P + TY  I+ + CK+G +   
Sbjct: 341 NIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTG 400

Query: 358 NRLLNEMNEKKIAPDNVT 375
           ++L+ EM      P  VT
Sbjct: 401 SKLMKEMQRDGYVPSVVT 418


>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
 gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
          Length = 636

 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 132/439 (30%), Positives = 224/439 (51%), Gaps = 4/439 (0%)

Query: 130 SHVLSWLVIFYANLKMTQ--DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKV 187
            +V+++  + +   + T+     ++F QM  +  MP+L     LL+ L ++ L D  +++
Sbjct: 75  PNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYEL 134

Query: 188 YKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCK 247
             +M + G+  +   Y+ L+   CK+  +D   K+  +    D   D+  Y+TLIA  CK
Sbjct: 135 LDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCK 194

Query: 248 KGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVT 305
            G   EA  + ++M      PD+VT+ +L+ G C+  R++EA+++   +  +  TPN +T
Sbjct: 195 TGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVIT 254

Query: 306 YTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMN 365
           Y++LIDG C+   + +A  + + M  +G+ P VVTYNS++   C    +  A  L+ EM 
Sbjct: 255 YSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMT 314

Query: 366 EKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMD 425
                PD +T NTLI+  CK G    A ++   M       D  TY  LI GFCK + +D
Sbjct: 315 ATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERID 374

Query: 426 IAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
           +A+ L   ML     P   ++S LV+GYCN    +   +LL+E V+     DV  Y +L+
Sbjct: 375 MARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLV 434

Query: 486 RRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
             FCK  ++  A+R+   M   G   + V YT+L  A+ RAG+P     +L++M    + 
Sbjct: 435 DGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQ 494

Query: 546 ITLKIYRSFSASYAKDNEI 564
             +  YRS    +    ++
Sbjct: 495 PNVITYRSLIGGFCGTGDL 513



 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 143/504 (28%), Positives = 245/504 (48%), Gaps = 29/504 (5%)

Query: 44  HKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSA----QN 99
           + VL+N +  C +  +  A+    E        ++ ++ T+IH   +     +A    + 
Sbjct: 45  YNVLINGF--CKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQ 102

Query: 100 MLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVH 159
           M+E   + + ++  ++L+ L +     +G                +  +  ++ D+MR  
Sbjct: 103 MVENGCMPNLVTYNTLLSGLCR-----NG----------------LMDEAYELLDEMRER 141

Query: 160 NLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKV 219
            L P   +   L+  L K    DM  KV++         ++  Y+ LI   CK+  +D+ 
Sbjct: 142 GLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEA 201

Query: 220 EKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHG 279
            KL  +M       D+ T+  L+   CK     EA  V + ME    +P+++TY+SLI G
Sbjct: 202 CKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDG 261

Query: 280 FCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPG 337
            C+ G++R+A+ +F+   ++G  PN VTY +LI G+C  N ++ AL L E M A G  P 
Sbjct: 262 LCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPD 321

Query: 338 VVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKN 397
           ++TYN+++  LCK GR  +ANRL  +M  K   PD +T + LI  +CK+     A  + +
Sbjct: 322 IITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFD 381

Query: 398 RMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKN 457
            ML+  ++ D  T+  L+ G+C A  +D A+ LL  M+ +  SP   +Y+ LVDG+C   
Sbjct: 382 DMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVG 441

Query: 458 NEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYT 517
                 ++L     RG   +V  Y ALI  FC+  K   A +L   M GNG+  + + Y 
Sbjct: 442 RMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYR 501

Query: 518 SLAYAYWRAGEPKACSDILDDMYR 541
           SL   +   G+ +    +L+ + R
Sbjct: 502 SLIGGFCGTGDLEEARKMLERLER 525



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 134/464 (28%), Positives = 225/464 (48%), Gaps = 16/464 (3%)

Query: 131 HVLSWLVIFYANLKMTQ--DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           +V++W ++     K  +  +    F +M+    +P+     VL+N   K       + + 
Sbjct: 6   NVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLL 65

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
           K+M + G+  N+  Y+ +IH  C+ + VD   KL  +M       +L TYNTL++  C+ 
Sbjct: 66  KEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRN 125

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGA--TPNHVTY 306
           G+  EA  + D M   G+ PD  +Y++L+ G C+ G++  A ++F D       P+ V Y
Sbjct: 126 GLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAY 185

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
           +TLI G C+   L+EA +L E M      P VVT+ +++  LCK  R+++A ++L  M +
Sbjct: 186 STLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMED 245

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
           +   P+ +T ++LI+  CK G    A +V  RM+  G+  +  TY +LIHGFC    +D 
Sbjct: 246 RNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDS 305

Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
           A  L+  M   G  P   +Y+ L+DG C         +L  +  ++    DV  Y  LI 
Sbjct: 306 ALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIG 365

Query: 487 RFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMI 546
            FCK E++D A+ LF+ M    +L D V +++L   Y  AG       +L++M       
Sbjct: 366 GFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSP 425

Query: 547 TLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKEMQLRN 590
            +  Y S    + K            V R + ++ + K M  R 
Sbjct: 426 DVYTYTSLVDGFCK------------VGRMVEARRVLKRMAKRG 457



 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 148/546 (27%), Positives = 255/546 (46%), Gaps = 32/546 (5%)

Query: 20  IMLKGHWAKLLNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQ 79
           ++LK      L PN+ +   ST IH         C    +  A+  + +        +L 
Sbjct: 63  LLLKEMKESGLAPNVVTY--STVIHGF-------CRQTKVDTAYKLFRQMVENGCMPNLV 113

Query: 80  SHWTMIHILTKNKHFKSAQNMLEKIALR----DFLSTPSVLNALVK----------IHDD 125
           ++ T++  L +N     A  +L+++  R    D  S  +++  L K            D+
Sbjct: 114 TYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDN 173

Query: 126 PDGNSH----VLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAK-DRL 180
            +G+        S L+          +  ++F++MR ++  P +   T L++ L K DRL
Sbjct: 174 SNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRL 233

Query: 181 TDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNT 240
            +   +V + M       N+  Y+ LI   CK+  V   +++   M  + +  ++ TYN+
Sbjct: 234 QE-AQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNS 292

Query: 241 LIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKG-- 298
           LI  +C       AL + + M   G  PDI+TYN+LI G C+ GR  EA RLF D+K   
Sbjct: 293 LIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKF 352

Query: 299 ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDAN 358
             P+ +TY+ LI G+C+   ++ A  L + M  + V P VVT+++++   C  G + DA 
Sbjct: 353 CNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAE 412

Query: 359 RLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGF 418
           RLL EM     +PD  T  +L++ +CK+G    A +V  RM + G   +  TY ALI  F
Sbjct: 413 RLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAF 472

Query: 419 CKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLC-VD 477
           C+A +  +A +LL  M+  G  P+  +Y  L+ G+C   + E   K+L+       C  D
Sbjct: 473 CRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKAD 532

Query: 478 VSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILD 537
           +  YR ++   C+  ++  A  L   ++ +G      IY +L     +  E     ++L+
Sbjct: 533 MFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLE 592

Query: 538 DMYRRR 543
           +M   R
Sbjct: 593 EMTLSR 598



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 123/400 (30%), Positives = 194/400 (48%), Gaps = 39/400 (9%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           Q+  QV + M   N  P++   + L++ L K        +V+K+M+  G+  N+  YN L
Sbjct: 234 QEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSL 293

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           IH  C ++ VD    L+ EM       D+ TYNTLI   CK G   EA  +   M+ +  
Sbjct: 294 IHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFC 353

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
           +PD++TY+ LI GFC+  R+  AR LF D+  +   P+ VT++TL++GYC A  +++A R
Sbjct: 354 NPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAER 413

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           L E M A    P V TY S++   CK GR+ +A R+L  M ++   P+ VT   LI+A+C
Sbjct: 414 LLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFC 473

Query: 385 KIGDTASAMKVKNRML-------------------------EAGLML-----------DQ 408
           + G    A K+   M+                         EA  ML           D 
Sbjct: 474 RAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADM 533

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
           F Y+ ++ G C+   M  A ELL  +  +G  P +  Y  L+ G C        +++L+E
Sbjct: 534 FAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEE 593

Query: 469 F-VSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGN 507
             +SR    +   Y A+I+   ++ + + A  L + + GN
Sbjct: 594 MTLSRKSRPNAEAYEAVIQELAREGRHEEANALADELLGN 633



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 81/353 (22%), Positives = 155/353 (43%), Gaps = 24/353 (6%)

Query: 71  VPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIA----LRDFLSTPSVLNALVKIHDDP 126
           V   + ++ ++ ++IH         SA  ++E++     L D ++  ++++ L K    P
Sbjct: 280 VRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAP 339

Query: 127 DGN------------SHVLSW--LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLL 172
           + N              V+++  L+  +  L+       +FD M    ++P +   + L+
Sbjct: 340 EANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLV 399

Query: 173 NSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVR 232
                  L D   ++ ++MV      +++ Y  L+   CK   + +  ++L  M  +  +
Sbjct: 400 EGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQ 459

Query: 233 ADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREAR-- 290
            ++ TY  LI  +C+ G    A  + + M   G+ P+++TY SLI GFC  G + EAR  
Sbjct: 460 PNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKM 519

Query: 291 --RLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
             RL RD +    +   Y  ++DG CR   +  AL L E +   G  P    Y +++R L
Sbjct: 520 LERLERD-ENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGL 578

Query: 349 CKEGRIRDANRLLNEMN-EKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML 400
           C+   +  A  +L EM   +K  P+      +I    + G    A  + + +L
Sbjct: 579 CQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEANALADELL 631


>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
 gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
          Length = 755

 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 132/439 (30%), Positives = 224/439 (51%), Gaps = 4/439 (0%)

Query: 130 SHVLSWLVIFYANLKMTQ--DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKV 187
            +V+++  + +   + T+     ++F QM  +  MP+L     LL+ L ++ L D  +++
Sbjct: 194 PNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYEL 253

Query: 188 YKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCK 247
             +M + G+  +   Y+ L+   CK+  +D   K+  +    D   D+  Y+TLIA  CK
Sbjct: 254 LDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCK 313

Query: 248 KGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVT 305
            G   EA  + ++M      PD+VT+ +L+ G C+  R++EA+++   +  +  TPN +T
Sbjct: 314 AGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVIT 373

Query: 306 YTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMN 365
           Y++LIDG C+   + +A  + + M  +G+ P VVTYNS++   C    +  A  L+ EM 
Sbjct: 374 YSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMT 433

Query: 366 EKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMD 425
                PD +T NTLI+  CK G    A ++   M       D  TY  LI GFCK + +D
Sbjct: 434 ATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERID 493

Query: 426 IAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
           +A+ L   ML     P   ++S LV+GYCN    +   +LL+E V+     DV  Y +L+
Sbjct: 494 MARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLV 553

Query: 486 RRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
             FCK  ++  A+R+   M   G   + V YT+L  A+ RAG+P     +L++M    + 
Sbjct: 554 DGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQ 613

Query: 546 ITLKIYRSFSASYAKDNEI 564
             +  YRS    +    ++
Sbjct: 614 PNVITYRSLIGGFCGTGDL 632



 Score =  231 bits (589), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 130/399 (32%), Positives = 206/399 (51%), Gaps = 2/399 (0%)

Query: 145 MTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYN 204
           +  +  ++ D+MR   L P   +   L+  L K    DM  KV++         ++  Y+
Sbjct: 246 LMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYS 305

Query: 205 VLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMERE 264
            LI   CK+  +D+  KL  +M       D+ T+  L+   CK     EA  V + ME  
Sbjct: 306 TLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDR 365

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEA 322
             +P+++TY+SLI G C+ G++R+A+ +F+   ++G  PN VTY +LI G+C  N ++ A
Sbjct: 366 NCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSA 425

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
           L L E M A G  P ++TYN+++  LCK GR  +ANRL  +M  K   PD +T + LI  
Sbjct: 426 LLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGG 485

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +CK+     A  + + ML+  ++ D  T+  L+ G+C A  +D A+ LL  M+ +  SP 
Sbjct: 486 FCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPD 545

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ LVDG+C         ++L     RG   +V  Y ALI  FC+  K   A RL  
Sbjct: 546 VYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLE 605

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
            M GNG+  + + Y SL   +   G+ +    IL+ + R
Sbjct: 606 EMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLER 644



 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 152/552 (27%), Positives = 256/552 (46%), Gaps = 39/552 (7%)

Query: 60  SCAFFK--WAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS--- 114
           +C   K  W     PN    + ++  +I  L K+     A  +LE+  +R+    P    
Sbjct: 43  TCHILKNGWPPGITPN----VFTYAVVIQGLCKSGDLDKACELLEE--MRESGPVPDAAI 96

Query: 115 ---VLNALVKIHDDPDG---------NSHVLSWLVIFYANLKMTQ--DGLQVFDQMRVHN 160
              V++AL K  +               +V++W ++     K  +  +    F +M+   
Sbjct: 97  YNFVIHALCKARNTAKALDYFRSMECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKG 156

Query: 161 LMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVE 220
            +P+     VL+N   K       + + K+M + G+  N+  Y+ +IH  C+ + VD   
Sbjct: 157 TVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAY 216

Query: 221 KLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGF 280
           KL  +M       +L TYNTL++  C+ G+  EA  + D M   G+ PD  +Y++L+ G 
Sbjct: 217 KLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGL 276

Query: 281 CREGRMREARRLFRDIKGA--TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGV 338
           C+ G++  A ++F D       P+ V Y+TLI G C+A  L+EA +L E M      P V
Sbjct: 277 CKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDV 336

Query: 339 VTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNR 398
           VT+ +++  LCK  R+++A ++L  M ++   P+ +T ++LI+  CK G    A +V  R
Sbjct: 337 VTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKR 396

Query: 399 MLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNN 458
           M+  G+  +  TY +LIHGFC    +D A  L+  M   G  P   +Y+ L+DG C    
Sbjct: 397 MIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGR 456

Query: 459 EEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTS 518
                +L  +  ++    DV  Y  LI  FCK E++D A+ LF+ M    +L D V +++
Sbjct: 457 APEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFST 516

Query: 519 LAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLM 578
           L   Y  AG       +L++M        +  Y S    + K            V R + 
Sbjct: 517 LVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCK------------VGRMVE 564

Query: 579 SKHIFKEMQLRN 590
           ++ + K M  R 
Sbjct: 565 ARRVLKRMAKRG 576



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 148/546 (27%), Positives = 254/546 (46%), Gaps = 32/546 (5%)

Query: 20  IMLKGHWAKLLNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQ 79
           ++LK      L PN+ +   ST IH         C    +  A+  + +        +L 
Sbjct: 182 LLLKEMKESGLAPNVVTY--STVIHGF-------CRQTKVDTAYKLFRQMVENGCMPNLV 232

Query: 80  SHWTMIHILTKNKHFKSAQNMLEKIALR----DFLSTPSVLNALVK----------IHDD 125
           ++ T++  L +N     A  +L+++  R    D  S  +++  L K            D+
Sbjct: 233 TYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDN 292

Query: 126 PDGNSH----VLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAK-DRL 180
            +G+        S L+          +  ++F++MR ++  P +   T L++ L K DRL
Sbjct: 293 SNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRL 352

Query: 181 TDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNT 240
            +   +V + M       N+  Y+ LI   CK+  V   +++   M  + +  ++ TYN+
Sbjct: 353 QE-AQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNS 411

Query: 241 LIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKG-- 298
           LI  +C       AL + + M   G  PDI+TYN+LI G C+ GR  EA RLF D+K   
Sbjct: 412 LIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKF 471

Query: 299 ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDAN 358
             P+ +TY+ LI G+C+   ++ A  L + M  + V P VVT+++++   C  G + DA 
Sbjct: 472 CNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAE 531

Query: 359 RLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGF 418
           RLL EM     +PD  T  +L++ +CK+G    A +V  RM + G   +  TY ALI  F
Sbjct: 532 RLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAF 591

Query: 419 CKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLC-VD 477
           C+A +  +A  LL  M+  G  P+  +Y  L+ G+C   + E   K+L+       C  D
Sbjct: 592 CRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKAD 651

Query: 478 VSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILD 537
           +  YR ++   C+  ++  A  L   ++ +G      IY +L     +  E     ++L+
Sbjct: 652 MFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLE 711

Query: 538 DMYRRR 543
           +M   R
Sbjct: 712 EMTLSR 717



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 117/424 (27%), Positives = 205/424 (48%), Gaps = 21/424 (4%)

Query: 88  LTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQ 147
           L K    + AQ +LE +  R+   TP+V+                 S L+         +
Sbjct: 346 LCKGDRLQEAQQVLETMEDRN--CTPNVI---------------TYSSLIDGLCKTGQVR 388

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D  +VF +M V  + P++     L++        D    + ++M   G + +I  YN LI
Sbjct: 389 DAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLI 448

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
              CK+    +  +L  +M+ K    D+ TY+ LI  +CK      A  + D M ++ + 
Sbjct: 449 DGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVL 508

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDIKGA--TPNHVTYTTLIDGYCRANDLEEALRL 325
           PD+VT+++L+ G+C  G + +A RL  ++  +  +P+  TYT+L+DG+C+   + EA R+
Sbjct: 509 PDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRV 568

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
            + MA +G  P VVTY +++   C+ G+   A RLL EM    + P+ +T  +LI  +C 
Sbjct: 569 LKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCG 628

Query: 386 IGDTASAMKVKNRM-LEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
            GD   A K+  R+  +     D F Y+ ++ G C+   M  A ELL  +  +G  P + 
Sbjct: 629 TGDLEEARKILERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHD 688

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEF-VSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNL 503
            Y  L+ G C        +++L+E  +SR    +   Y A+I+   ++ + + A  L + 
Sbjct: 689 IYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEANALADE 748

Query: 504 MQGN 507
           + GN
Sbjct: 749 LLGN 752



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 120/387 (31%), Positives = 180/387 (46%), Gaps = 34/387 (8%)

Query: 171 LLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKD 230
           L  +L + R  D    + K     G+  N+  Y V+I   CKS D+DK  +LL EM    
Sbjct: 30  LFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLDKACELLEEMRESG 89

Query: 231 VRADLFTYNTLIALYCK-----KGMHY---------------------------EALAVQ 258
              D   YN +I   CK     K + Y                           EA    
Sbjct: 90  PVPDAAIYNFVIHALCKARNTAKALDYFRSMECEKNVITWTIMIDGLCKANRLPEATTYF 149

Query: 259 DRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRA 316
            +M+++G  P+  TYN LI+GFC+  ++  A  L +++K  G  PN VTY+T+I G+CR 
Sbjct: 150 AKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQ 209

Query: 317 NDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTC 376
             ++ A +L   M   G  P +VTYN++L  LC+ G + +A  LL+EM E+ + PD  + 
Sbjct: 210 TKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSY 269

Query: 377 NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD 436
           +TL+   CK G    A+KV           D   Y  LI G CKA  +D A +L   M +
Sbjct: 270 DTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRE 329

Query: 437 AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDY 496
               P   +++ L+DG C  +  +   ++L+    R    +V  Y +LI   CK  +V  
Sbjct: 330 NSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRD 389

Query: 497 AQRLFNLMQGNGILGDSVIYTSLAYAY 523
           AQ +F  M   GI  + V Y SL + +
Sbjct: 390 AQEVFKRMIVRGIEPNVVTYNSLIHGF 416



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 118/398 (29%), Positives = 183/398 (45%), Gaps = 13/398 (3%)

Query: 193 QLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHY 252
           Q G   N++ YN L  A  ++  +D+   +L       +  ++FTY  +I   CK G   
Sbjct: 17  QQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLD 76

Query: 253 EALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDG 312
           +A  + + M   G  PD   YN +IH  C+     +A   FR ++    N +T+T +IDG
Sbjct: 77  KACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSME-CEKNVITWTIMIDG 135

Query: 313 YCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPD 372
            C+AN L EA      M  KG  P   TYN ++   CK  ++  A  LL EM E  +AP+
Sbjct: 136 LCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPN 195

Query: 373 NVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLF 432
            VT +T+I+ +C+     +A K+  +M+E G M +  TY  L+ G C+   MD A ELL 
Sbjct: 196 VVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLD 255

Query: 433 GMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKE 492
            M + G  P   SY  L+ G C     +  LK+ ++  +     DV  Y  LI   CK  
Sbjct: 256 EMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAG 315

Query: 493 KVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYR 552
           ++D A +LF  M+ N    D V +T+L     +    +    +L+ M  R     +  Y 
Sbjct: 316 RLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYS 375

Query: 553 SFSASYAKDNEILDLFWSHVVDRGLMSKHIFKEMQLRN 590
           S      K  ++ D            ++ +FK M +R 
Sbjct: 376 SLIDGLCKTGQVRD------------AQEVFKRMIVRG 401



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 74/279 (26%), Positives = 131/279 (46%), Gaps = 5/279 (1%)

Query: 262 EREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDL 319
           +++G   ++ TYN L     R  R+ E   + ++    G TPN  TY  +I G C++ DL
Sbjct: 16  KQQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDL 75

Query: 320 EEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTL 379
           ++A  L E M   G  P    YN ++  LCK    R+  + L+     +   + +T   +
Sbjct: 76  DKACELLEEMRESGPVPDAAIYNFVIHALCK---ARNTAKALDYFRSMECEKNVITWTIM 132

Query: 380 INAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGF 439
           I+  CK      A     +M + G + +++TY  LI+GFCK  ++  A  LL  M ++G 
Sbjct: 133 IDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGL 192

Query: 440 SPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQR 499
           +P+  +YS ++ G+C +   +   KL  + V  G   ++  Y  L+   C+   +D A  
Sbjct: 193 APNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYE 252

Query: 500 LFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDD 538
           L + M+  G+  D   Y +L     + G+      + +D
Sbjct: 253 LLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFED 291



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 81/353 (22%), Positives = 155/353 (43%), Gaps = 24/353 (6%)

Query: 71  VPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIA----LRDFLSTPSVLNALVKIHDDP 126
           V   + ++ ++ ++IH         SA  ++E++     L D ++  ++++ L K    P
Sbjct: 399 VRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAP 458

Query: 127 DGN------------SHVLSW--LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLL 172
           + N              V+++  L+  +  L+       +FD M    ++P +   + L+
Sbjct: 459 EANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLV 518

Query: 173 NSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVR 232
                  L D   ++ ++MV      +++ Y  L+   CK   + +  ++L  M  +  +
Sbjct: 519 EGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQ 578

Query: 233 ADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREAR-- 290
            ++ TY  LI  +C+ G    A  + + M   G+ P+++TY SLI GFC  G + EAR  
Sbjct: 579 PNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKI 638

Query: 291 --RLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
             RL RD +    +   Y  ++DG CR   +  AL L E +   G  P    Y +++R L
Sbjct: 639 LERLERD-ENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGL 697

Query: 349 CKEGRIRDANRLLNEMN-EKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML 400
           C+   +  A  +L EM   +K  P+      +I    + G    A  + + +L
Sbjct: 698 CQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEANALADELL 750


>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
          Length = 552

 Score =  231 bits (589), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 136/412 (33%), Positives = 219/412 (53%), Gaps = 5/412 (1%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG-VVANIHLYNV 205
           ++ + V   MR     P+      L+ +  +    D   +V   M + G    N+  +N 
Sbjct: 27  EEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNS 86

Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
           +++  CK+  ++   K+  EM  + +  D+ +YNTL++ YCK G  +E+LAV   M + G
Sbjct: 87  MVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRG 146

Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEAL 323
           + PD+VT+ SLIH  C+ G + +A  L   ++  G   N VT+T LIDG+C+   L++AL
Sbjct: 147 LVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDAL 206

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
              E M   G+ P VV YN+++   CK GR+  A  L+ EM  K++ PD VT +T+I+ Y
Sbjct: 207 LAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGY 266

Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY 443
           CK+G+  SA ++  +ML+ G++ D  TY +LI G C+ K ++ A EL   ML  G  P  
Sbjct: 267 CKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDE 326

Query: 444 CSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNL 503
            +Y+ L+DG+C + N E  L L DE + +G+  DV  Y  LI    K  +   A RL   
Sbjct: 327 FTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFK 386

Query: 504 MQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITL-KIYRSF 554
           +     + D++ Y +L     +A E K+   +L     + LM    K+Y+S 
Sbjct: 387 LYHEDPVPDNIKYDALMLCCSKA-EFKSVVALLKGFCMKGLMKEADKVYQSM 437



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 115/364 (31%), Positives = 197/364 (54%), Gaps = 3/364 (0%)

Query: 191 MVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGM 250
           MV+ GV  N++ YN+L+ A C    +++   ++ +M       +  TYNTL+A +C+ G 
Sbjct: 1   MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60

Query: 251 HYEALAVQDRMEREG-ISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYT 307
              A  V   M  EG   P++VT+NS+++G C+ GRM  AR++F ++  +G  P+ V+Y 
Sbjct: 61  LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120

Query: 308 TLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEK 367
           TL+ GYC+   L E+L +   M  +G+ P VVT+ S++   CK G +  A  L+ +M E+
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 180

Query: 368 KIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIA 427
            +  + VT   LI+ +CK G    A+     M + G+      Y ALI+G+CK   MD+A
Sbjct: 181 GLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLA 240

Query: 428 KELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRR 487
           +EL+  M      P   +YS ++ GYC   N ++  +L  + + +G+  D   Y +LIR 
Sbjct: 241 RELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRG 300

Query: 488 FCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMIT 547
            C++++++ A  LF  M   G+  D   YT+L   + + G  +    + D+M R+ ++  
Sbjct: 301 LCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPD 360

Query: 548 LKIY 551
           +  Y
Sbjct: 361 VVTY 364



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 101/314 (32%), Positives = 172/314 (54%), Gaps = 6/314 (1%)

Query: 261 MEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGA--TPNHVTYTTLIDGYCRAND 318
           M R G++P++ TYN L+   C  GR+ EA  +  D++GA   PN VTY TL+  +CRA +
Sbjct: 1   MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60

Query: 319 LEEALRLREVMAAKG-VYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCN 377
           L+ A R+  +M  +G   P +VT+NS++  LCK GR+  A ++ +EM  + +APD V+ N
Sbjct: 61  LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120

Query: 378 TLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA 437
           TL++ YCK+G    ++ V + M + GL+ D  T+ +LIH  CKA  ++ A  L+  M + 
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 180

Query: 438 GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYA 497
           G   +  +++ L+DG+C K   +  L  ++E    G+   V  Y ALI  +CK  ++D A
Sbjct: 181 GLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLA 240

Query: 498 QRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSAS 557
           + L   M+   +  D V Y+++   Y + G   +   +   M ++ ++     Y S    
Sbjct: 241 RELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRG 300

Query: 558 YAKD---NEILDLF 568
             ++   N+  +LF
Sbjct: 301 LCEEKRLNDACELF 314



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 110/389 (28%), Positives = 171/389 (43%), Gaps = 87/389 (22%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           +VFD+M    L P + +   LL+   K         V+ +M Q G+V ++  +  LIHA 
Sbjct: 102 KVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHAT 161

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISP-- 268
           CK+ ++++   L+ +M  + +R +  T+  LI  +CKKG   +AL   + M + GI P  
Sbjct: 162 CKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSV 221

Query: 269 ---------------------------------DIVTYNSLIHGFCREG----------- 284
                                            D+VTY+++I G+C+ G           
Sbjct: 222 VCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQK 281

Query: 285 ------------------------RMREARRLFRDI--KGATPNHVTYTTLIDGYCRAND 318
                                   R+ +A  LF ++   G  P+  TYTTLIDG+C+  +
Sbjct: 282 MLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGN 341

Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVT--- 375
           +E+AL L + M  KGV P VVTY+ ++  L K  R ++A+RLL ++  +   PDN+    
Sbjct: 342 VEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDA 401

Query: 376 ----CN--------TLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
               C+         L+  +C  G    A KV   ML+    LD   Y  LIHG C+   
Sbjct: 402 LMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGN 461

Query: 424 MDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
           +  A      ML +GFSP+  S   LV G
Sbjct: 462 VRKALSFHKQMLRSGFSPNSTSTISLVRG 490



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 69/285 (24%), Positives = 138/285 (48%), Gaps = 22/285 (7%)

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           L+  Y  L       ++  +M    + P +   + +++   K    D  +++ +KM++ G
Sbjct: 227 LINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKG 286

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
           V+ +   Y+ LI   C+   ++   +L   M    V+ D FTY TLI  +CK+G   +AL
Sbjct: 287 VLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKAL 346

Query: 256 AVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGY 313
           ++ D M R+G+ PD+VTY+ LI+G  +  R +EA RL   +  +   P+++ Y  L+   
Sbjct: 347 SLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALM--- 403

Query: 314 CRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDN 373
                         +  +K  +  VV   ++L+  C +G +++A+++   M ++    D 
Sbjct: 404 --------------LCCSKAEFKSVV---ALLKGFCMKGLMKEADKVYQSMLDRNWKLDG 446

Query: 374 VTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGF 418
              + LI+ +C+ G+   A+    +ML +G   +  +  +L+ G 
Sbjct: 447 SVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGL 491



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 70/289 (24%), Positives = 130/289 (44%), Gaps = 17/289 (5%)

Query: 134 SWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQ 193
           S ++  Y  +       Q+  +M    ++P     + L+  L +++  +   ++++ M+Q
Sbjct: 260 STIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQ 319

Query: 194 LGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYE 253
           LGV  +   Y  LI   CK  +V+K   L  EM  K V  D+ TY+ LI    K     E
Sbjct: 320 LGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKE 379

Query: 254 ALAVQDRMEREGISPDIVTYN---------------SLIHGFCREGRMREARRLFRDI-- 296
           A  +  ++  E   PD + Y+               +L+ GFC +G M+EA ++++ +  
Sbjct: 380 AHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLD 439

Query: 297 KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRD 356
           +    +   Y+ LI G+CR  ++ +AL   + M   G  P   +  S++R L +EG + +
Sbjct: 440 RNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVE 499

Query: 357 ANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLM 405
           A+  + ++       D      LI+   K G+  + + V   M   GL+
Sbjct: 500 ADNAIQDLLTCCPLADAEASKALIDLNRKEGNVDALIDVLCGMARDGLL 548


>gi|224129154|ref|XP_002320514.1| predicted protein [Populus trichocarpa]
 gi|222861287|gb|EEE98829.1| predicted protein [Populus trichocarpa]
          Length = 478

 Score =  231 bits (589), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 139/468 (29%), Positives = 250/468 (53%), Gaps = 9/468 (1%)

Query: 10  DTKFIKTISAIMLKGHWAKLLNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAES 69
           D  F+  + + ++   W KL    +++  T   ++ +LL +    H+  LS  FF   ++
Sbjct: 14  DLDFVNVVHSHLIHSDWDKL--NKLSTHFTPFRVNHILLKIQKD-HV--LSLEFFNSLKT 68

Query: 70  AVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVL-NALVKIHDDPDG 128
             P    +L++H  ++HILTK   FKSAQ++L  +     +  P  L + L+  +   D 
Sbjct: 69  LNP-ISLTLETHSIILHILTKKSKFKSAQSILRTLLASRSIDLPGKLFDTLLFSYRMCDS 127

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           +  V   L   YA++   ++   VF +M+ +  +P + +C   L+SL      D+    Y
Sbjct: 128 SPRVFDSLFKTYAHMNKFRNATDVFSRMKDYGFLPTVESCNAYLSSLLDFHRVDIALTFY 187

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
           ++M +  +  N + +N+++ A CKS  ++K  ++L EME   +  ++ +YNTLIA +C K
Sbjct: 188 REMRRCRISPNSYTFNLVLSALCKSGKLEKAVEVLREMESVGITPNVVSYNTLIAGHCNK 247

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTY 306
           G+   A  +++ M + G+ P++VT+NSLIHGFC+EG++ EA R F ++K    TPN VTY
Sbjct: 248 GLLSIATKLKNLMGKNGLEPNVVTFNSLIHGFCKEGKLHEANRFFSEMKVMNVTPNTVTY 307

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
            TLI+GY +  +   A ++ E M   GV   ++TYN+++  LCKEG+ + A  L+ E+++
Sbjct: 308 NTLINGYGQVGNSNMAGKVYEEMMRNGVKADILTYNALILGLCKEGKTKKAAFLVKELDK 367

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
           + + P+  T + LI+  C   ++  A ++   M+ +G   ++ T+K L   F K ++ + 
Sbjct: 368 ENLVPNASTYSALISGQCARKNSDRAFQLYKSMVRSGCHPNEQTFKMLTSAFVKNEDFEG 427

Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGL 474
           A  +L  M     +    +   + DG C    E   +KL  E  +R L
Sbjct: 428 AFNVLMDMFARSMASDSNTLLEIYDGLCQCGKENLAMKLCHEMEARRL 475



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 93/294 (31%), Positives = 147/294 (50%), Gaps = 2/294 (0%)

Query: 254 ALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLID 311
           AL     M R  ISP+  T+N ++   C+ G++ +A  + R+++  G TPN V+Y TLI 
Sbjct: 183 ALTFYREMRRCRISPNSYTFNLVLSALCKSGKLEKAVEVLREMESVGITPNVVSYNTLIA 242

Query: 312 GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAP 371
           G+C    L  A +L+ +M   G+ P VVT+NS++   CKEG++ +ANR  +EM    + P
Sbjct: 243 GHCNKGLLSIATKLKNLMGKNGLEPNVVTFNSLIHGFCKEGKLHEANRFFSEMKVMNVTP 302

Query: 372 DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
           + VT NTLIN Y ++G++  A KV   M+  G+  D  TY ALI G CK  +   A  L+
Sbjct: 303 NTVTYNTLINGYGQVGNSNMAGKVYEEMMRNGVKADILTYNALILGLCKEGKTKKAAFLV 362

Query: 432 FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
             +      P+  +YS L+ G C + N +   +L    V  G   +   ++ L   F K 
Sbjct: 363 KELDKENLVPNASTYSALISGQCARKNSDRAFQLYKSMVRSGCHPNEQTFKMLTSAFVKN 422

Query: 492 EKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
           E  + A  +   M    +  DS     +     + G+      +  +M  RRL+
Sbjct: 423 EDFEGAFNVLMDMFARSMASDSNTLLEIYDGLCQCGKENLAMKLCHEMEARRLI 476



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 68/320 (21%), Positives = 132/320 (41%), Gaps = 25/320 (7%)

Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFR--------DIKG--------------ATPNH 303
           IS  + T++ ++H   ++ + + A+ + R        D+ G              ++P  
Sbjct: 72  ISLTLETHSIILHILTKKSKFKSAQSILRTLLASRSIDLPGKLFDTLLFSYRMCDSSPR- 130

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
             + +L   Y   N    A  +   M   G  P V + N+ L  L    R+  A     E
Sbjct: 131 -VFDSLFKTYAHMNKFRNATDVFSRMKDYGFLPTVESCNAYLSSLLDFHRVDIALTFYRE 189

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
           M   +I+P++ T N +++A CK G    A++V   M   G+  +  +Y  LI G C    
Sbjct: 190 MRRCRISPNSYTFNLVLSALCKSGKLEKAVEVLREMESVGITPNVVSYNTLIAGHCNKGL 249

Query: 424 MDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRA 483
           + IA +L   M   G  P+  +++ L+ G+C +       +   E     +  +   Y  
Sbjct: 250 LSIATKLKNLMGKNGLEPNVVTFNSLIHGFCKEGKLHEANRFFSEMKVMNVTPNTVTYNT 309

Query: 484 LIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRR 543
           LI  + +    + A +++  M  NG+  D + Y +L     + G+ K  + ++ ++ +  
Sbjct: 310 LINGYGQVGNSNMAGKVYEEMMRNGVKADILTYNALILGLCKEGKTKKAAFLVKELDKEN 369

Query: 544 LMITLKIYRSF-SASYAKDN 562
           L+     Y +  S   A+ N
Sbjct: 370 LVPNASTYSALISGQCARKN 389



 Score = 40.4 bits (93), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 29/127 (22%), Positives = 60/127 (47%), Gaps = 6/127 (4%)

Query: 146 TQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNV 205
           T+    +  ++   NL+P+    + L++     + +D  +++YK MV+ G   N   + +
Sbjct: 355 TKKAAFLVKELDKENLVPNASTYSALISGQCARKNSDRAFQLYKSMVRSGCHPNEQTFKM 414

Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY---CKKGMHYEALAVQDRME 262
           L  A  K+ D +    +L +M  + + +D    NTL+ +Y   C+ G    A+ +   ME
Sbjct: 415 LTSAFVKNEDFEGAFNVLMDMFARSMASD---SNTLLEIYDGLCQCGKENLAMKLCHEME 471

Query: 263 REGISPD 269
              + P+
Sbjct: 472 ARRLIPE 478


>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
 gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
          Length = 738

 Score =  231 bits (589), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 131/385 (34%), Positives = 209/385 (54%), Gaps = 3/385 (0%)

Query: 146 TQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNV 205
           T D  Q+FDQM   ++ P+L A   +L++L K         +  K++Q G+  N+  YN+
Sbjct: 170 THDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNI 229

Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
            I   C++  + +  +L+  M    V  D+ TYNTLI   CKK M  EA+    RM  +G
Sbjct: 230 WIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQG 288

Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEAL 323
             PD  TYN++I G+C+   ++EA  L +D   KG  P+ VTY +LI+G C   D+E AL
Sbjct: 289 CLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERAL 348

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
            L     AKG+ P +V YNS+++ LC +G I  A +++NEM E+   PD  T N +IN  
Sbjct: 349 ELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGL 408

Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY 443
           CK+G+ + A  V N  +  G + D FT+  LI G+CK  ++D A +L+  M + G +P  
Sbjct: 409 CKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDT 468

Query: 444 CSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNL 503
            +Y+ +++G C       + +   E + +G   +   Y  LI  FC+  K++ A ++   
Sbjct: 469 ITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVK 528

Query: 504 MQGNGILGDSVIYTSLAYAYWRAGE 528
           M   G+  D+V + +L Y + R G+
Sbjct: 529 MSQEGLHPDAVSFNTLIYGFCRNGD 553



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 114/355 (32%), Positives = 181/355 (50%), Gaps = 2/355 (0%)

Query: 145 MTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYN 204
           M Q+ +    +M     +P       +++   K  +     ++ K  V  G V +   Y 
Sbjct: 273 MPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYC 332

Query: 205 VLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMERE 264
            LI+  C   DV++  +L  E + K ++ D+  YN+L+   C +G+   AL V + M  E
Sbjct: 333 SLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEE 392

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEA 322
           G  PDI TYN +I+G C+ G + +A  +  D  +KG  P+  T+ TLIDGYC+   L+ A
Sbjct: 393 GCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSA 452

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
           L+L E M   G+ P  +TYNS+L  LCK G++ + N    EM  K   P+ +T N LI  
Sbjct: 453 LQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIEN 512

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +C+      A KV  +M + GL  D  ++  LI+GFC+  +++ A  L   + + G+S +
Sbjct: 513 FCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSAT 572

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYA 497
             +++ L+  +  K N     K+ DE +S+G   D   YR LI   CK   VD A
Sbjct: 573 ADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRA 627



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 93/391 (23%), Positives = 155/391 (39%), Gaps = 69/391 (17%)

Query: 238 YNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSL--------------------- 276
           Y   I  Y + G   +A+   +RM+     P    YN++                     
Sbjct: 56  YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRML 115

Query: 277 --------------IHGFCREGRMREARRLFRDI--KGAT-------------------- 300
                         +  FC   R   A RL R +  +GA                     
Sbjct: 116 AAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQ 175

Query: 301 -----------PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLC 349
                      PN   +  ++   C+  D+ EA  L   +  +G+   + TYN  +R LC
Sbjct: 176 LFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLC 235

Query: 350 KEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQF 409
           + GR+ +A RL++ M    + PD VT NTLI   CK      AM    RM+  G + D F
Sbjct: 236 EAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDF 294

Query: 410 TYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEF 469
           TY  +I G+CK   +  A ELL   +  GF P   +Y  L++G C + + E  L+L +E 
Sbjct: 295 TYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEA 354

Query: 470 VSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEP 529
            ++G+  D+ VY +L++  C +  + +A ++ N M   G   D   Y  +     + G  
Sbjct: 355 QAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNI 414

Query: 530 KACSDILDDMYRRRLMITLKIYRSFSASYAK 560
              + +++D   +  +  +  + +    Y K
Sbjct: 415 SDATVVMNDAIMKGYLPDVFTFNTLIDGYCK 445



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 120/236 (50%), Gaps = 4/236 (1%)

Query: 149 GLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIH 208
            LQ+ ++M  + + P       +LN L K    + V + +++M+  G   N   YN+LI 
Sbjct: 452 ALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIE 511

Query: 209 ACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISP 268
             C+S+ +++  K++ +M  + +  D  ++NTLI  +C+ G    A  +  ++E +G S 
Sbjct: 512 NFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSA 571

Query: 269 DIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLR 326
              T+N+LI  F  +  M  A ++F ++  KG   +  TY  LIDG C+  +++ A    
Sbjct: 572 TADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHL 631

Query: 327 EVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
             M  KG  P + T+  ++  L    R+  A  +++ M +  + P+ V  +T++NA
Sbjct: 632 VEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEVV--DTILNA 685



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 59/267 (22%), Positives = 99/267 (37%), Gaps = 32/267 (11%)

Query: 303 HVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLN 362
           H  Y   I  Y RA  L +A+   E M      P    YN+I+  L        A+++  
Sbjct: 53  HPLYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYV 112

Query: 363 EMNEKKIAPDNVTCNTLIN------------------------AYCKI-------GDTAS 391
            M    ++PD  T    +                         AYC +       G T  
Sbjct: 113 RMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHD 172

Query: 392 AMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVD 451
           A ++ ++ML   +  +   +  ++H  CK  ++  A  LL  ++  G S +  +Y+  + 
Sbjct: 173 ARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIR 232

Query: 452 GYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILG 511
           G C        ++L+D   +  +  DV  Y  LIR  CKK     A      M   G L 
Sbjct: 233 GLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLP 291

Query: 512 DSVIYTSLAYAYWRAGEPKACSDILDD 538
           D   Y ++   Y +    +  +++L D
Sbjct: 292 DDFTYNTIIDGYCKISMVQEATELLKD 318


>gi|255660854|gb|ACU25596.1| pentatricopeptide repeat-containing protein [Stachytarpheta
           cayennensis]
          Length = 418

 Score =  231 bits (589), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 120/404 (29%), Positives = 222/404 (54%), Gaps = 3/404 (0%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS-VLNALVKIHDDPDGNSH 131
           +Y+H+L S+ TMIH+L  ++    A+++++ +  R    + S V  A+++       + +
Sbjct: 8   SYRHTLHSYCTMIHLLCTHQMLIEAKSLIQVVVSRKGKDSASDVFEAILETKGTQISDFY 67

Query: 132 VLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKM 191
           V S L+I Y      +D +Q F   + H +      C  +L  L + R   +VW  YK++
Sbjct: 68  VFSGLMIAYLESGFVRDAVQCFRLTKQHKIRVPFDTCRKVLEHLMEFRYFKLVWDFYKEV 127

Query: 192 VQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMH 251
           ++ G  A+++ +N+L+   CK  ++   + +   +    +R  + ++NTLI  Y K G  
Sbjct: 128 LECGYPASLYFFNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYIKLGDL 187

Query: 252 YEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTL 309
            E   ++  M   G  PD+ TY+ LI+G C+EG++ EA  LF ++   G  PN VT+TTL
Sbjct: 188 DEGFRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTL 247

Query: 310 IDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI 369
           I G+C+   ++ A+ + + M ++G+ P ++TYN+++  LCK+G ++  + L++EM    +
Sbjct: 248 IHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGL 307

Query: 370 APDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKE 429
            PD ++  TLI+  CK GD   A++++N+M++  + LD   Y ALI   C+      A++
Sbjct: 308 KPDKISYTTLIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLCREGRAGDAEK 367

Query: 430 LLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
           +L  ML  G  P   +Y+ +++ +C K + +   KLL E    G
Sbjct: 368 MLREMLSVGLKPDNGTYTMIINEFCKKRDSKTASKLLREMQRDG 411



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 96/279 (34%), Positives = 152/279 (54%), Gaps = 2/279 (0%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           G    +  +N L+  FC+EG MR A+ +F  I   G  P+ V++ TLI+GY +  DL+E 
Sbjct: 131 GYPASLYFFNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYIKLGDLDEG 190

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            RL+  M A G  P V TY+ ++  LCKEG++ +AN L NEM +  + P+ VT  TLI+ 
Sbjct: 191 FRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHG 250

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +CK      AM++  +ML  GL  D  TY  LI+G CK  E+    +L+  M+  G  P 
Sbjct: 251 HCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPD 310

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             SY+ L+DG C + + E  L+L ++ +   + +D   Y ALI   C++ +   A+++  
Sbjct: 311 KISYTTLIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLCREGRAGDAEKMLR 370

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
            M   G+  D+  YT +   + +  + K  S +L +M R
Sbjct: 371 EMLSVGLKPDNGTYTMIINEFCKKRDSKTASKLLREMQR 409



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 94/345 (27%), Positives = 160/345 (46%), Gaps = 44/345 (12%)

Query: 232 RADLFTYNTLIALYCKKGMHYEALA-VQDRMEREGISP-----------------DIVTY 273
           R  L +Y T+I L C   M  EA + +Q  + R+G                    D   +
Sbjct: 10  RHTLHSYCTMIHLLCTHQMLIEAKSLIQVVVSRKGKDSASDVFEAILETKGTQISDFYVF 69

Query: 274 NSLIHGFCREGRMREARRLFRDIKGATPNH---VTYTTLIDGYCRANDLEEALRLR---- 326
           + L+  +   G +R+A + FR     T  H   V + T     CR   LE  +  R    
Sbjct: 70  SGLMIAYLESGFVRDAVQCFR----LTKQHKIRVPFDT-----CRKV-LEHLMEFRYFKL 119

Query: 327 ------EVMAAKGVYPG-VVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTL 379
                 EV+     YP  +  +N ++++ CKEG +R A  + + + +  + P  V+ NTL
Sbjct: 120 VWDFYKEVLECG--YPASLYFFNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTL 177

Query: 380 INAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGF 439
           IN Y K+GD     ++K+ M  +G   D +TY  LI+G CK  ++D A EL   MLD G 
Sbjct: 178 INGYIKLGDLDEGFRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGL 237

Query: 440 SPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQR 499
            P+  +++ L+ G+C     +  +++  + +S+GL  D+  Y  LI   CKK ++     
Sbjct: 238 VPNGVTFTTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHD 297

Query: 500 LFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL 544
           L + M  NG+  D + YT+L     + G+ +   ++ + M +  +
Sbjct: 298 LIDEMIMNGLKPDKISYTTLIDGSCKEGDLEIALELRNKMIQESI 342



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 74/261 (28%), Positives = 122/261 (46%), Gaps = 37/261 (14%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           VFD +    L P + +   L+N   K    D  +++   M   G   +++ Y++LI+  C
Sbjct: 158 VFDAITKWGLRPSVVSFNTLINGYIKLGDLDEGFRLKSAMHASGAQPDVYTYSILINGLC 217

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           K   +D+  +L  EM    +  +  T+ TLI  +CK      A+ +  +M  +G+SPD++
Sbjct: 218 KEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLI 277

Query: 272 TYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           TYN+LI+G C++G +++   L  ++   G  P+ ++YTTLIDG C+  DLE AL LR  M
Sbjct: 278 TYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLIDGSCKEGDLEIALELRNKM 337

Query: 330 AAK-----------------------------------GVYPGVVTYNSILRKLCKEGRI 354
             +                                   G+ P   TY  I+ + CK+   
Sbjct: 338 IQESIRLDDVAYTALISCLCREGRAGDAEKMLREMLSVGLKPDNGTYTMIINEFCKKRDS 397

Query: 355 RDANRLLNEMNEKKIAPDNVT 375
           + A++LL EM      P  VT
Sbjct: 398 KTASKLLREMQRDGPVPGVVT 418



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 91/192 (47%), Gaps = 37/192 (19%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           ++F++M  + L+P+    T L++   K+   D+  ++YK+M+  G+  ++  YN LI+  
Sbjct: 227 ELFNEMLDNGLVPNGVTFTTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGL 286

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMERE------ 264
           CK  ++ +V  L+ EM    ++ D  +Y TLI   CK+G    AL ++++M +E      
Sbjct: 287 CKKGELKQVHDLIDEMIMNGLKPDKISYTTLIDGSCKEGDLEIALELRNKMIQESIRLDD 346

Query: 265 -----------------------------GISPDIVTYNSLIHGFCREGRMREARRLFRD 295
                                        G+ PD  TY  +I+ FC++   + A +L R+
Sbjct: 347 VAYTALISCLCREGRAGDAEKMLREMLSVGLKPDNGTYTMIINEFCKKRDSKTASKLLRE 406

Query: 296 IK--GATPNHVT 305
           ++  G  P  VT
Sbjct: 407 MQRDGPVPGVVT 418


>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
 gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
          Length = 1041

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 153/534 (28%), Positives = 247/534 (46%), Gaps = 55/534 (10%)

Query: 108 DFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHA 167
           D     ++LN ++ +   PD  ++  + ++  Y   + T     +  +M+  NL+P  + 
Sbjct: 391 DMEKADALLNEMIMVGIKPDTQTY--NNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYT 448

Query: 168 CTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEME 227
           C +++N L +    +   +V++ MV LGV  N  +Y  LI    +     +  ++L  M+
Sbjct: 449 CGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMD 508

Query: 228 FKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMR 287
            K V+ D+  YN++I   CK     EA      M   G+ P++ TY +LIHG+C+ G M+
Sbjct: 509 KKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQ 568

Query: 288 EARRLFRDIKGA--TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSIL 345
            A R F+++ G    PN V  T LIDGYC+     EA  +   M  + V+P V TY++++
Sbjct: 569 VADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALI 628

Query: 346 RKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLM 405
             L + G+++ A  LL+E  EK + PD  T N++I+ +CK G    A ++   M + G+ 
Sbjct: 629 HGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGIS 688

Query: 406 LDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKL 465
            +  TY ALI+G CKA E++ A+EL  G+   G + +  +Y+ ++DGYC   N     +L
Sbjct: 689 PNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRL 748

Query: 466 LDEFVSRGLCVDVSVYRALI---RR-------------------------------FCKK 491
            DE   +G+  D  VY ALI   R+                               FCK 
Sbjct: 749 FDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGFASTSSLNALMDGFCKS 808

Query: 492 EKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIY 551
            KV  A +L   M    +  D V YT L   + + G  K       DM +R LM     Y
Sbjct: 809 GKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTY 868

Query: 552 RSFSASY-----------------AKDNEILDLFWSHVVDRGLMSKHIFKEMQL 588
            +  + Y                 AKD E   + WS ++D  L      K ++L
Sbjct: 869 TALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKL 922



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 133/459 (28%), Positives = 214/459 (46%), Gaps = 14/459 (3%)

Query: 134 SWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQ 193
           S L+  +   K   +   + ++M    L P   A T L++   +   +   ++V ++M+ 
Sbjct: 310 SILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLA 369

Query: 194 LGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYE 253
            GV  N+  YN L+   CK  D++K + LL EM    ++ D  TYN +I  Y K+     
Sbjct: 370 RGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSR 429

Query: 254 ALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLID 311
              +   M++  + P   T   +I+G CR G + +A R+F  +   G  PN V YTTLI 
Sbjct: 430 VKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIK 489

Query: 312 GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAP 371
           G+ +    +EA+R+ +VM  KGV P V+ YNS++  LCK  ++ +A   L EM E+ + P
Sbjct: 490 GHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKP 549

Query: 372 DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
           +  T   LI+ YCK G+   A +    ML  G+  +     ALI G+CK      A  + 
Sbjct: 550 NVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIF 609

Query: 432 FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
             ML     P   +YS L+ G       +  ++LL EF+ +GL  DV  Y ++I  FCK+
Sbjct: 610 RCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQ 669

Query: 492 EKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIY 551
             +  A +L   M   GI  + + Y +L     +AGE +   ++ D +  + L      Y
Sbjct: 670 GGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTY 729

Query: 552 RSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKEMQLRN 590
            +    Y K   +   F             +F EM L+ 
Sbjct: 730 ATIIDGYCKSGNLSKAF------------RLFDEMTLKG 756



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 127/449 (28%), Positives = 215/449 (47%), Gaps = 36/449 (8%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N +    L+  Y      Q   + F +M    + P+   CT L++   K+  T     ++
Sbjct: 550 NVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIF 609

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
           + M+   V  ++  Y+ LIH   ++  +    +LL E   K +  D+FTYN++I+ +CK+
Sbjct: 610 RCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQ 669

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTY 306
           G   +A  + + M ++GISP+I+TYN+LI+G C+ G +  AR LF  I  KG   N VTY
Sbjct: 670 GGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTY 729

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTY------------------------- 341
            T+IDGYC++ +L +A RL + M  KGV P    Y                         
Sbjct: 730 ATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQ 789

Query: 342 ---------NSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
                    N+++   CK G++ +AN+LL +M +K + PD+VT   LI+ +CK G    A
Sbjct: 790 KGFASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEA 849

Query: 393 MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
            +    M +  LM +  TY AL+ G+  A        L   M+     P   ++S ++D 
Sbjct: 850 EQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDA 909

Query: 453 YCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGD 512
           +  + +    LKL+D+ + +G  V  +V   LI   C+KE V    ++   ++  G+   
Sbjct: 910 HLKEGDHVKTLKLVDDMLKKGGNVSKNVCHVLIDPLCRKEHVSEVLKVLEKIEEQGLNLS 969

Query: 513 SVIYTSLAYAYWRAGEPKACSDILDDMYR 541
               ++L   + +AG+    + +L  M R
Sbjct: 970 LATCSTLVRCFHKAGKMDGAARVLKSMVR 998



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 142/594 (23%), Positives = 253/594 (42%), Gaps = 67/594 (11%)

Query: 8   NSDTKFIKTISAIMLKGHWAKLLNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWA 67
            +++  +  I+  + + +W  LL P +++ L+   +H V+    N    P     FF W 
Sbjct: 36  QNNSNIVNEITTFLNQKNWESLL-PLVSNKLSPDVVHSVITKQVN---DPKRLLDFFNWV 91

Query: 68  ESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPD 127
           +  +  +   LQS   +  IL  ++ F  A +++ ++ +        +L++L+K   + D
Sbjct: 92  QFQM-GFSQKLQSFSILALILCNSRLFSRADSVVNQMIMMSSGGYSEILDSLIKSCKEFD 150

Query: 128 -------------GNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNS 174
                            V   L+  Y    +  + +  F   + +  +  L  C  LL+ 
Sbjct: 151 LNNVNGNENSNNNDRGVVFELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSD 210

Query: 175 LAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRAD 234
           L K    ++ W+ Y  M++    AN+      +H                         D
Sbjct: 211 LLKANKLELFWRFYNGMLE----ANV------LH-------------------------D 235

Query: 235 LFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR 294
           ++TY  LI  + + G   E   +   ME +G SP +VTYN +I G CR G + EA  L +
Sbjct: 236 VYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVDEAFELKK 295

Query: 295 --DIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEG 352
             D KG   +  TY+ LIDG+ +     EA  + E M +KG+ PG V Y +++    ++G
Sbjct: 296 LMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQG 355

Query: 353 RIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYK 412
              +A R+  EM  + +  +  T N L+   CK GD   A  + N M+  G+  D  TY 
Sbjct: 356 DSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYN 415

Query: 413 ALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSR 472
            +I G+ K +     K+LL  M  +   P+  +   +++G C   + E   ++ +  VS 
Sbjct: 416 NMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSL 475

Query: 473 GLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKAC 532
           G+  +  +Y  LI+   ++ +   A R+  +M   G+  D + Y S+     ++ + +  
Sbjct: 476 GVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEA 535

Query: 533 SDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKEM 586
            D L +M  R L   +  Y +    Y K  E+       V DR       FKEM
Sbjct: 536 KDYLVEMIERGLKPNVYTYGALIHGYCKSGEM------QVADR------YFKEM 577


>gi|255660828|gb|ACU25583.1| pentatricopeptide repeat-containing protein [Lantana canescens]
          Length = 418

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 121/410 (29%), Positives = 221/410 (53%), Gaps = 3/410 (0%)

Query: 67  AESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS-VLNALVKIHDD 125
           +  A   ++H+L  + TMIH L  ++    A+++++ +  R    + S V  A+ +    
Sbjct: 2   SSPANSTFRHTLHXYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAIXETXGT 61

Query: 126 PDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVW 185
              + +V S L+  Y      +D ++ +   R H        C  +L  L K +   +VW
Sbjct: 62  QRSDJYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVW 121

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
             Y+++++ G  A+++ +N+L+H  CK  D+   + +   +    +R  + +YNTL+  Y
Sbjct: 122 GFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGY 181

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNH 303
            + G   E   ++  M   G+ PD+ TY+ LI+G C+E +M +A  LF +  +KG  PN 
Sbjct: 182 IRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNG 241

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
           VT+TTLIDG+C+   ++ A+ + + M ++ + P ++TYN+++  LCK+G ++ A+ L++E
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDE 301

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
           M+ K + PD +T  TLI+  CK GD  SA + + RM++  + LD+  Y AL  G C+   
Sbjct: 302 MSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALXSGLCQEGR 361

Query: 424 MDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
              A+++L  ML  G  P   +Y+ +++ +C K +     KLL E    G
Sbjct: 362 SVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDG 411



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 92/279 (32%), Positives = 148/279 (53%), Gaps = 2/279 (0%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           G    +  +N L+H FC++G +R A+ +F  I   G  P+ V+Y TL++GY R  DL+E 
Sbjct: 131 GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEG 190

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            RL+  M A GV P V TY+ ++  LCKE ++ DAN L +EM  K + P+ VT  TLI+ 
Sbjct: 191 FRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDG 250

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +CK G    AM++  +ML   L  D  TY  LI+G CK  ++  A  L+  M   G  P 
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPD 310

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ L+DG C + + ++  +     +   + +D   Y AL    C++ +   A+++  
Sbjct: 311 KITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALXSGLCQEGRSVDAEKMLR 370

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
            M   G+  D+  YT +   + + G+    S +L +M R
Sbjct: 371 EMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQR 409



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 148/324 (45%), Gaps = 34/324 (10%)

Query: 232 RADLFTYNTLIALYCKKGMHYEALA-VQDRMEREGISP-----------------DIVTY 273
           R  L  Y T+I   C   M  EA + +Q  + R+G                    DJ  +
Sbjct: 10  RHTLHXYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAIXETXGTQRSDJYVF 69

Query: 274 NSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKG 333
           + LI  +   G +R+A   +R     T  H  +       CR   LE  ++L+      G
Sbjct: 70  SGLITAYLESGFLRDAIECYR----LTREHKFWVPF--DTCRKV-LEHLMKLKYFKLVWG 122

Query: 334 VYPGVVT---------YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
            Y  ++          +N ++ + CK+G IR A  + + + +  + P  V+ NTL+N Y 
Sbjct: 123 FYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 182

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           ++GD     ++K+ ML +G+  D +TY  LI+G CK  +MD A EL   ML  G  P+  
Sbjct: 183 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGV 242

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
           +++ L+DG+C     +  +++  + +S+ L  D+  Y  LI   CKK  +  A  L + M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEM 302

Query: 505 QGNGILGDSVIYTSLAYAYWRAGE 528
              G+  D + YT+L     + G+
Sbjct: 303 SVKGLKPDKITYTTLIDGCCKEGD 326



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 81/272 (29%), Positives = 133/272 (48%), Gaps = 8/272 (2%)

Query: 108 DFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHA 167
           D     SV +A+ K    P   S+  + L+  Y  L    +G ++   M    + P ++ 
Sbjct: 151 DIRVAQSVFDAITKWGLRPSVVSY--NTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYT 208

Query: 168 CTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEME 227
            +VL+N L K+   D   +++ +M+  G+V N   +  LI   CK+  VD   ++  +M 
Sbjct: 209 YSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQML 268

Query: 228 FKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMR 287
            + +  DL TYNTLI   CKKG   +A  + D M  +G+ PD +TY +LI G C+EG + 
Sbjct: 269 SQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLD 328

Query: 288 EA----RRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNS 343
            A    +R+ ++      + V YT L  G C+     +A ++   M + G+ P   TY  
Sbjct: 329 SAFEHRKRMIQE--NIRLDEVAYTALXSGLCQEGRSVDAEKMLREMLSVGLKPDARTYTM 386

Query: 344 ILRKLCKEGRIRDANRLLNEMNEKKIAPDNVT 375
           I+ + CK+G +   ++LL EM      P  VT
Sbjct: 387 IINEFCKKGDVWKGSKLLKEMQRDGHVPSVVT 418



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 66/287 (22%), Positives = 118/287 (41%), Gaps = 20/287 (6%)

Query: 273 YNSLIHGFCREGRMREARRLF-----RDIKGATP---------------NHVTYTTLIDG 312
           Y ++IH  C    + EA+ L      R  KG+                 +   ++ LI  
Sbjct: 16  YCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAIXETXGTQRSDJYVFSGLITA 75

Query: 313 YCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPD 372
           Y  +  L +A+    +      +    T   +L  L K    +       E+ E      
Sbjct: 76  YLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPAS 135

Query: 373 NVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLF 432
               N L++ +CK GD   A  V + + + GL     +Y  L++G+ +  ++D    L  
Sbjct: 136 LYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKS 195

Query: 433 GMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKE 492
            ML +G  P   +YS L++G C ++  +   +L DE + +GL  +   +  LI   CK  
Sbjct: 196 AMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNG 255

Query: 493 KVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
           +VD A  ++  M    +  D + Y +L Y   + G+ K    ++D+M
Sbjct: 256 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEM 302


>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 687

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 149/513 (29%), Positives = 252/513 (49%), Gaps = 20/513 (3%)

Query: 57  PSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKI-------ALRDF 109
           P ++  FF+WAE     +K S  S+  ++ IL +N   +SA  ++EK+        + D 
Sbjct: 61  PVVALRFFRWAERQT-GFKRSEISYSVILDILARNGLMRSAYCVMEKVVSVKMENGVIDV 119

Query: 110 LSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACT 169
           +S+  V    VK+         +L  L+  Y    + +  L VF +M    L+P +  C 
Sbjct: 120 VSSSEVSMPSVKL---------ILDLLLWIYVKKSLLEKCLLVFYKMVSKGLLPDVKNCN 170

Query: 170 VLLNSLA-KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEF 228
            +L  L  +D   D+  +VY  MV+ G+   +  YN ++ + CK   V +  +LL +M+ 
Sbjct: 171 RVLRLLRDRDNNIDVAREVYNVMVECGICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQA 230

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
                +  TYN L+      G   +A  +   M R G+   + TY+ LI G+C +G++ E
Sbjct: 231 MGCSPNDVTYNVLVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEE 290

Query: 289 ARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILR 346
           A RL  ++  +GA P  VTY T++ G C+   + +A +L +VM  K + P +V+YN+++ 
Sbjct: 291 ASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIY 350

Query: 347 KLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLML 406
              + G I +A  L  E+  + +AP  VT NTLI+  C++GD   AM++K+ M++ G   
Sbjct: 351 GYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDP 410

Query: 407 DQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLL 466
           D FT+   + GFCK   + +AKEL   ML+ G  P   +Y   + G     +      + 
Sbjct: 411 DVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQ 470

Query: 467 DEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRA 526
           +E ++RG   D+  Y   I    K   +  A  L   M  NG++ D V YTS+ +A+  A
Sbjct: 471 EEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMA 530

Query: 527 GEPKACSDILDDMYRRRLMITLKIYRSFSASYA 559
           G  +    +  +M  + +  ++  Y     SYA
Sbjct: 531 GHLRKARALFLEMLSKGIFPSVVTYTVLIHSYA 563



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 130/454 (28%), Positives = 208/454 (45%), Gaps = 37/454 (8%)

Query: 145 MTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYN 204
           M Q+ LQ+  QM+     P+     VL+N L+     +   ++ + M++LG+  +++ Y+
Sbjct: 217 MVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYD 276

Query: 205 VLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMERE 264
            LI   C+   +++  +L  EM  +     + TYNT++   CK G   +A  + D M  +
Sbjct: 277 PLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNK 336

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
            + PD+V+YN+LI+G+ R G + EA  LF +++     P+ VTY TLIDG CR  DL+ A
Sbjct: 337 NLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVA 396

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDN--------- 373
           +RL++ M   G  P V T+ + +R  CK G +  A  L +EM  + + PD          
Sbjct: 397 MRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVG 456

Query: 374 --------------------------VTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLD 407
                                     +T N  I+   K+G+   A ++  +ML  GL+ D
Sbjct: 457 ELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPD 516

Query: 408 QFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLD 467
             TY ++IH    A  +  A+ L   ML  G  PS  +Y+ L+  Y  +   +  +    
Sbjct: 517 HVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFF 576

Query: 468 EFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
           E   +G+  +V  Y ALI   CK  K+D A   F  MQ  GI  +   YT L       G
Sbjct: 577 EMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTILINENCNLG 636

Query: 528 EPKACSDILDDMYRRRLMITLKIYRSFSASYAKD 561
             +    +  DM  R +      +RS      KD
Sbjct: 637 HWQEALRLYKDMLDREIQPDSCTHRSLLKHLNKD 670



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 103/407 (25%), Positives = 192/407 (47%), Gaps = 39/407 (9%)

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAK-DRLTDMVWKVYKKMVQL 194
           L+  Y      ++  ++ ++M     +P +     ++  L K  R++D   K+   MV  
Sbjct: 278 LIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVSD-ARKLLDVMVNK 336

Query: 195 GVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEA 254
            ++ ++  YN LI+   +  ++ +   L  E+ ++ +   + TYNTLI   C+ G    A
Sbjct: 337 NLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVA 396

Query: 255 LAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDG 312
           + ++D M + G  PD+ T+ + + GFC+ G +  A+ LF ++  +G  P+   Y T I G
Sbjct: 397 MRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVG 456

Query: 313 YCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPD 372
             +  D  +A  ++E M A+G  P ++TYN  +  L K G +++A+ L+ +M    + PD
Sbjct: 457 ELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPD 516

Query: 373 NVTCNTLINAYCKIGDTASA-------------------------MKVKNR--------- 398
           +VT  ++I+A+   G    A                           V+ R         
Sbjct: 517 HVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFF 576

Query: 399 -MLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKN 457
            M E G+  +  TY ALI+G CK ++MD A      M   G SP+  +Y+ L++  CN  
Sbjct: 577 EMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTILINENCNLG 636

Query: 458 NEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
           + +  L+L  + + R +  D   +R+L++   K  K+   + L N++
Sbjct: 637 HWQEALRLYKDMLDREIQPDSCTHRSLLKHLNKDYKLHVVRHLENVI 683



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 96/207 (46%), Gaps = 1/207 (0%)

Query: 363 EMNEKKIAPDNVTCNTLINAYC-KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKA 421
           +M  K + PD   CN ++     +  +   A +V N M+E G+     TY  ++  FCK 
Sbjct: 156 KMVSKGLLPDVKNCNRVLRLLRDRDNNIDVAREVYNVMVECGICPTVVTYNTMLDSFCKK 215

Query: 422 KEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVY 481
             +  A +LLF M   G SP+  +Y+ LV+G  +    E   +L+ + +  GL V V  Y
Sbjct: 216 GMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTY 275

Query: 482 RALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
             LIR +C+K +++ A RL   M   G +   V Y ++ Y   + G       +LD M  
Sbjct: 276 DPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVN 335

Query: 542 RRLMITLKIYRSFSASYAKDNEILDLF 568
           + LM  L  Y +    Y +   I + F
Sbjct: 336 KNLMPDLVSYNTLIYGYTRLGNIGEAF 362


>gi|410109925|gb|AFV61042.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           hermannioides]
          Length = 417

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 123/415 (29%), Positives = 222/415 (53%), Gaps = 3/415 (0%)

Query: 74  YKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS-VLNALVKIHDDPDGNSHV 132
           ++H+L S+ TMIH L  ++    A+++++ +  R    + S V   +++       + +V
Sbjct: 1   FRHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFATILETKGTQRSDIYV 60

Query: 133 LSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMV 192
            S L+  Y      +D ++ +   R H L      C  +L  L K +   +VW  Y++++
Sbjct: 61  FSGLITAYLESGFXRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEIL 120

Query: 193 QLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHY 252
           + G  A+++ +N+L+H  CK  D+   + +   +    +R  + +YNTL+  Y + G   
Sbjct: 121 ECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLD 180

Query: 253 EALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLI 310
           E   ++  M   G+ PD+ TY+ LI+G C+E +M +A  LF +  +KG  PN VT+TTLI
Sbjct: 181 EGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLI 240

Query: 311 DGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIA 370
           DG C+   ++ A+ + + M ++ + P ++TYN+++  LCK+G ++ A+ L++EM+ K + 
Sbjct: 241 DGRCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLK 300

Query: 371 PDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL 430
           PD  T  TLI+  CK GD  +A + + RM++  + LD   Y ALI G C+      A+++
Sbjct: 301 PDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKM 360

Query: 431 LFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
           L  ML     P   +Y+ +++ +C K +     KLL E    G    V  Y  L+
Sbjct: 361 LREMLSVDLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLM 415



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 93/279 (33%), Positives = 148/279 (53%), Gaps = 2/279 (0%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           G    +  +N L+H FC++G +R A+ +F  I   G  P+ V+Y TL++GY R  DL+E 
Sbjct: 123 GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEG 182

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            RL+  M A GV P V TY+ ++  LCKE ++ DAN L +EM  K + P+ VT  TLI+ 
Sbjct: 183 FRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDG 242

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
            CK G    AM++  RML   L+ D  TY  LI+G CK  ++  A +L+  M   G  P 
Sbjct: 243 RCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPD 302

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ L+DG C + + +   +     +   + +D   Y ALI   C++ +   A+++  
Sbjct: 303 KFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLR 362

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
            M    +  D+  YT +   + + G+    S +L +M R
Sbjct: 363 EMLSVDLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQR 401



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 88/324 (27%), Positives = 145/324 (44%), Gaps = 34/324 (10%)

Query: 232 RADLFTYNTLIALYCKKGMHYEALA-VQDRMEREGISP-----------------DIVTY 273
           R  L +Y T+I   C   M  EA + +Q  + R+G                    DI  +
Sbjct: 2   RHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFATILETKGTQRSDIYVF 61

Query: 274 NSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKG 333
           + LI  +   G  R+A   +R     T  H  +       CR   LE  ++L+      G
Sbjct: 62  SGLITAYLESGFXRDAIECYR----LTREHKLWVPF--DTCRKV-LEHLMKLKYFKLVWG 114

Query: 334 VYPGVVT---------YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
            Y  ++          +N ++ + CK+G IR A  + + + +  + P  V+ NTL+N Y 
Sbjct: 115 FYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 174

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           ++GD     ++K+ ML +G+  D +TY  LI+G CK  +MD A EL   ML  G  P+  
Sbjct: 175 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGV 234

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
           +++ L+DG C     +  +++    +S+ L  D+  Y  LI   CKK  +  A  L + M
Sbjct: 235 TFTTLIDGRCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEM 294

Query: 505 QGNGILGDSVIYTSLAYAYWRAGE 528
              G+  D   YT+L     + G+
Sbjct: 295 SMKGLKPDKFTYTTLIDGCCKEGD 318



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/139 (30%), Positives = 70/139 (50%), Gaps = 3/139 (2%)

Query: 141 ANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANI 200
            +LK   D   + D+M +  L P     T L++   K+   D  ++  K+M+Q  +  + 
Sbjct: 282 GDLKQAHD---LIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDD 338

Query: 201 HLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDR 260
             Y  LI   C+       EK+L EM   D++ D  TY  +I  +CKKG  ++   +   
Sbjct: 339 VAYTALISGLCQEGRSVDAEKMLREMLSVDLKPDTGTYTMIINEFCKKGDVWKGSKLLKE 398

Query: 261 MEREGISPDIVTYNSLIHG 279
           M+R+G +P +VTYN L++G
Sbjct: 399 MQRDGHAPSVVTYNVLMNG 417


>gi|255660796|gb|ACU25567.1| pentatricopeptide repeat-containing protein [Verbena litoralis]
          Length = 418

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 119/404 (29%), Positives = 220/404 (54%), Gaps = 3/404 (0%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS-VLNALVKIHDDPDGNSH 131
            ++H+LQS+ TMIH L   +    A+ +++ +  R    + S V  A+++       + +
Sbjct: 8   TFRHTLQSYCTMIHFLCTQQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIY 67

Query: 132 VLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKM 191
           V S L+  Y      +D ++ +   + H        C  +L  L K +   +VW  Y++ 
Sbjct: 68  VFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEES 127

Query: 192 VQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMH 251
           ++ G  A+++ +N+L+H+  K  ++   + +   +    +R  + ++NTL+  Y K G  
Sbjct: 128 LECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDL 187

Query: 252 YEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTL 309
            E   +++ M+  G+ PD+ TY+ LI+G C+E +M +A  LF ++  KG  PN VT+TTL
Sbjct: 188 DEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANXLFDEMLDKGLVPNGVTFTTL 247

Query: 310 IDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI 369
           IDG+C+   ++ A+ + + M ++ + P ++TYN+++  LCK+G ++ A  L++EM  K +
Sbjct: 248 IDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGL 307

Query: 370 APDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKE 429
            PD +T  TLI+  CK GD  +A + + RM++  + LD   Y ALI G C+      A++
Sbjct: 308 XPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEK 367

Query: 430 LLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
           +L  ML+ G  P   +Y+ +++ +C K +     KLL E    G
Sbjct: 368 MLREMLNVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 90/283 (31%), Positives = 149/283 (52%), Gaps = 2/283 (0%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           G    +  +N L+H F +EG +R A+ +F  I      P+ V++ TL++GY +  DL+E 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEG 190

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            RL+  M   GV P V TY+ ++  LCKE ++ DAN L +EM +K + P+ VT  TLI+ 
Sbjct: 191 FRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANXLFDEMLDKGLVPNGVTFTTLIDG 250

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +CK G    AM++  +ML   L  D  TY  LI+G CK  ++  A++L+  M+  G  P 
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPD 310

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ L+DG C + + E   +     +   + +D   Y ALI   C++ +   A+++  
Sbjct: 311 KITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLR 370

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
            M   G+  +   YT +   + + G+    S +L +M R   M
Sbjct: 371 EMLNVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYM 413



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 89/318 (27%), Positives = 151/318 (47%), Gaps = 31/318 (9%)

Query: 66  WAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKI---ALR-DFLSTPSVLNALVK 121
           + ES    Y  SL     ++H   K    + AQ++ + I   +LR   +S  +++N  +K
Sbjct: 124 YEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIK 183

Query: 122 IHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLT 181
           + D                       +G ++ + M+V  + P ++  +VL+N L K+   
Sbjct: 184 LGD---------------------LDEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKM 222

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
           D    ++ +M+  G+V N   +  LI   CK+  VD   ++  +M  + +  DL TYNTL
Sbjct: 223 DDANXLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTL 282

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA----RRLFRDIK 297
           I   CKKG   +A  + D M  +G+ PD +TY +LI G C+EG +  A    +R+ ++  
Sbjct: 283 IYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYTTLIDGNCKEGDLETAFEYRKRMIKE-- 340

Query: 298 GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDA 357
               + V YT LI G C+     +A ++   M   G+ P + TY  I+ + CK+G +   
Sbjct: 341 NIRLDDVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPEIGTYTMIINEFCKKGDVWTG 400

Query: 358 NRLLNEMNEKKIAPDNVT 375
           ++LL EM      P  VT
Sbjct: 401 SKLLKEMQRDGYMPSVVT 418



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 95/344 (27%), Positives = 156/344 (45%), Gaps = 45/344 (13%)

Query: 232 RADLFTYNTLIALYCKKGMHYEALA-VQDRMEREGISP-----------------DIVTY 273
           R  L +Y T+I   C + M  EA   +Q  + R+G                    DI  +
Sbjct: 10  RHTLQSYCTMIHFLCTQQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVF 69

Query: 274 NSLIHGFCREGRMREARRLFRDIKGATPNH---VTYTTLIDGYCRANDLEEALRLREVMA 330
           + LI  +   G +R+A   +R     T  H   V + T     CR   LE  ++L+    
Sbjct: 70  SGLITAYLESGFLRDAIECYR----LTKEHKFRVPFDT-----CRKV-LEHLMKLKYFKL 119

Query: 331 AKGVY---------PGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
             G Y           +  +N ++    KEG IR A  + + + +  + P  V+ NTL+N
Sbjct: 120 VWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMN 179

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
            Y K+GD     ++KN M  +G+  D +TY  LI+G CK  +MD A  L   MLD G  P
Sbjct: 180 GYIKLGDLDEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANXLFDEMLDKGLVP 239

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
           +  +++ L+DG+C     +  +++  + +S+ L  D+  Y  LI   CKK  +  AQ L 
Sbjct: 240 NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLI 299

Query: 502 NLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
           + M   G+  D + YT+L     + G+ +   +     YR+R++
Sbjct: 300 DEMIMKGLXPDKITYTTLIDGNCKEGDLETAFE-----YRKRMI 338


>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
          Length = 851

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 131/394 (33%), Positives = 208/394 (52%), Gaps = 4/394 (1%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N +  + L+  + ++   Q GL  F +M  +  +P++     L+++  K    D  + + 
Sbjct: 9   NVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLL 68

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
           K M   G+  N+  YNV+I+  C+   + +  ++L EM +K    D  TYNTL+  YCK+
Sbjct: 69  KSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKE 128

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTY 306
           G  ++AL +   M R G+SP +VTY +LI+  C+   +  A   F    I+G  PN  TY
Sbjct: 129 GNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTY 188

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
           TTLIDG+ R   L EA R+   M   G  P VVTYN+ +   C   R+ +A  ++ EM E
Sbjct: 189 TTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVE 248

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
           K +APD V+ +T+I+ +C+ G+   A ++K  M+E G+  D  TY +LI G C+ + +  
Sbjct: 249 KGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTE 308

Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
           A +L   MLD G  P   +Y+ L++ YC + +    L L DE + +G   D   Y  LI 
Sbjct: 309 ACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLIN 368

Query: 487 RFCKKEKVDYAQR-LFNLMQGNGILGDSVIYTSL 519
              K+ +   A+R LF L+    +  D V Y +L
Sbjct: 369 GLNKQARTREAKRLLFKLIYEESVPSD-VTYDTL 401



 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 114/357 (31%), Positives = 186/357 (52%), Gaps = 2/357 (0%)

Query: 191 MVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGM 250
           M++  V  N++ YN+LI   C   ++ K      EME      ++ TYNTLI  YCK G 
Sbjct: 1   MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60

Query: 251 HYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTT 308
             EA  +   M  +G+ P++++YN +I+G CREG M+EA  +  ++  KG TP+ VTY T
Sbjct: 61  IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNT 120

Query: 309 LIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKK 368
           L++GYC+  +  +AL +   M   GV P VVTY +++  +CK   +  A    ++M  + 
Sbjct: 121 LLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRG 180

Query: 369 IAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAK 428
           + P+  T  TLI+ + + G    A ++ N M E+G      TY A IHG C  + M+ A 
Sbjct: 181 LRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEAL 240

Query: 429 ELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRF 488
            ++  M++ G +P   SYS ++ G+C K   +   ++  E V +G+  D   Y +LI+  
Sbjct: 241 GVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGL 300

Query: 489 CKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
           C+  ++  A  L   M   G+  D   YT+L  AY   G+      + D+M  +  +
Sbjct: 301 CEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFL 357



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 120/408 (29%), Positives = 205/408 (50%), Gaps = 17/408 (4%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           ++ ++M      P       LLN   K+        ++ +MV+ GV  ++  Y  LI++ 
Sbjct: 101 EILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSM 160

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           CK+ ++++  +   +M  + +R +  TY TLI  + ++G+  EA  + + M   G SP +
Sbjct: 161 CKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSV 220

Query: 271 VTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
           VTYN+ IHG C   RM EA  + +++  KG  P+ V+Y+T+I G+CR  +L+ A ++++ 
Sbjct: 221 VTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQE 280

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M  KGV P  VTY+S+++ LC+  R+ +A  L  EM +  + PD  T  TLINAYC  GD
Sbjct: 281 MVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGD 340

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
              A+ + + M+  G + D  TY  LI+G  K      AK LLF ++     PS  +Y  
Sbjct: 341 LNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDT 400

Query: 449 LVD---------------GYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEK 493
           L++               G+C K       ++ +  V R      +VY  +I   C+   
Sbjct: 401 LIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGN 460

Query: 494 VDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
           +  A  L+  M  +G +  +V   +L  A ++ G  +  S+++ D  R
Sbjct: 461 LPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIGDTLR 508



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 76/280 (27%), Positives = 132/280 (47%), Gaps = 2/280 (0%)

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
           +PN  TY  LI G+C   +L++ L     M   G  P VVTYN+++   CK GRI +A  
Sbjct: 7   SPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFG 66

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
           LL  M+ K + P+ ++ N +IN  C+ G    A ++   M   G   D+ TY  L++G+C
Sbjct: 67  LLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYC 126

Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
           K      A  +   M+  G SPS  +Y+ L++  C   N    ++  D+   RGL  +  
Sbjct: 127 KEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNER 186

Query: 480 VYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
            Y  LI  F ++  ++ A R+ N M  +G     V Y +  + +      +    ++ +M
Sbjct: 187 TYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEM 246

Query: 540 YRRRLMITLKIYRSFSASYAKDNEILDLFW--SHVVDRGL 577
             + L   +  Y +  + + +  E+   F     +V++G+
Sbjct: 247 VEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGV 286



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 69/221 (31%), Positives = 105/221 (47%)

Query: 334 VYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAM 393
           V P V TYN ++R  C  G ++       EM      P+ VT NTLI+AYCK+G    A 
Sbjct: 6   VSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAF 65

Query: 394 KVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGY 453
            +   M   G+  +  +Y  +I+G C+   M  A E+L  M   GF+P   +Y+ L++GY
Sbjct: 66  GLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGY 125

Query: 454 CNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDS 513
           C + N    L +  E V  G+   V  Y ALI   CK   ++ A   F+ M+  G+  + 
Sbjct: 126 CKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNE 185

Query: 514 VIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSF 554
             YT+L   + R G       IL++M       ++  Y +F
Sbjct: 186 RTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAF 226



 Score = 82.0 bits (201), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 49/197 (24%), Positives = 87/197 (44%)

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
           M   +++P+  T N LI  +C +G+    +     M   G + +  TY  LI  +CK   
Sbjct: 1   MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60

Query: 424 MDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRA 483
           +D A  LL  M   G  P+  SY+ +++G C + + +   ++L+E   +G   D   Y  
Sbjct: 61  IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNT 120

Query: 484 LIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRR 543
           L+  +CK+     A  +   M  NG+    V YT+L  +  +A       +  D M  R 
Sbjct: 121 LLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRG 180

Query: 544 LMITLKIYRSFSASYAK 560
           L    + Y +    +++
Sbjct: 181 LRPNERTYTTLIDGFSR 197



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 61/288 (21%), Positives = 124/288 (43%), Gaps = 49/288 (17%)

Query: 91  NKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGL 150
           ++ F+  Q M+EK    D ++  S++  L +                     ++   +  
Sbjct: 272 DRAFQMKQEMVEKGVSPDAVTYSSLIQGLCE---------------------MRRLTEAC 310

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
            +  +M    L P     T L+N+   +   +    ++ +M+  G + +   Y+VLI+  
Sbjct: 311 DLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGL 370

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
            K +   + ++LL ++ +++      TY+TLI   C   + ++++               
Sbjct: 371 NKQARTREAKRLLFKLIYEESVPSDVTYDTLIE-NCSN-IEFKSVV-------------- 414

Query: 271 VTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
               +LI GFC +G M EA R+F  +  +   P    Y  +I G+CR  +L +A  L + 
Sbjct: 415 ----ALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKE 470

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE------MNEKKIA 370
           M   G  P  VT  ++++ L KEG   + + ++ +      +NE ++A
Sbjct: 471 MIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIGDTLRSCRLNEAELA 518


>gi|410109891|gb|AFV61025.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           cujabensis]
          Length = 409

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 124/407 (30%), Positives = 220/407 (54%), Gaps = 4/407 (0%)

Query: 66  WAES-AVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS-VLNALVKIH 123
           W  S A   ++H+L S+ TMIH L  ++    A++++E +  R    + S V  A+++  
Sbjct: 2   WLSSPANSTFRHTLHSYCTMIHFLCTHQMLSEAKSLIEVVVSRKGKGSASAVFAAVLETK 61

Query: 124 DDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDM 183
            +   + +V S L+  Y      +D ++ +     H L      C  +L  L K +   +
Sbjct: 62  GNQRSDIYVFSGLITAYLESGFLRDAIECYRLTXEHKLWVPFDTCRKVLEHLMKLKYFKL 121

Query: 184 VWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIA 243
           VW  Y+++++ G  A+++ +N+L+H  CK  D+   + +   +    +R  + +YNTL+ 
Sbjct: 122 VWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMN 181

Query: 244 LYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATP 301
            Y + G   E   ++  M   G  PD+ TY+ LI+G C+E +M  A  LF +  +KG  P
Sbjct: 182 GYIRLGDLDEGFRLKSAMLASGXXPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVP 241

Query: 302 NHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLL 361
           N VT+TTLIDG+C+   ++ A+ + + M ++ + P ++TYN+++  LCK+G ++ A+ L+
Sbjct: 242 NXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLI 301

Query: 362 NEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKA 421
           +EM+ K + PD  T  TLI+  CK GD  +A   + RM++  + LD   Y ALI G C+ 
Sbjct: 302 DEMSXKGLKPDKFTYTTLIDGCCKEGDLDTAFXHRKRMIQENIRLDDVAYTALISGLCQE 361

Query: 422 KEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
                A+++L  ML  G  P   +Y+ +++ +C K +     KLL E
Sbjct: 362 GRSVDAEKMLREMLSVGLXPDAGTYTMIINEFCKKGDVWKGSKLLKE 408



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 90/277 (32%), Positives = 146/277 (52%), Gaps = 2/277 (0%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           G    +  +N L+H FC++G +R A+ +F  I   G  P+ V+Y TL++GY R  DL+E 
Sbjct: 133 GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEG 192

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            RL+  M A G  P V TY+ ++  LCKE ++  AN L +EM  K + P+ VT  TLI+ 
Sbjct: 193 FRLKSAMLASGXXPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNXVTFTTLIDG 252

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +CK G    AM++  +ML   L+ D  TY  LI+G CK  ++  A +L+  M   G  P 
Sbjct: 253 HCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSXKGLKPD 312

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ L+DG C + + +         +   + +D   Y ALI   C++ +   A+++  
Sbjct: 313 KFTYTTLIDGCCKEGDLDTAFXHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLR 372

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
            M   G+  D+  YT +   + + G+    S +L +M
Sbjct: 373 EMLSVGLXPDAGTYTMIINEFCKKGDVWKGSKLLKEM 409



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 80/277 (28%), Positives = 142/277 (51%), Gaps = 20/277 (7%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKI---ALR-DFLSTPSVLNALVKIHDDPDG 128
            Y  SL     ++H   K+   + AQ++ + I    LR   +S  +++N  +++ D  +G
Sbjct: 133 GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEG 192

Query: 129 ------------NSHVLSWLVIFYANLKMTQ-DGL-QVFDQMRVHNLMPHLHACTVLLNS 174
                          V ++ V+     K ++ DG  ++FD+M V  L+P+    T L++ 
Sbjct: 193 FRLKSAMLASGXXPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNXVTFTTLIDG 252

Query: 175 LAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRAD 234
             K+   D+  ++YK+M+   ++ ++  YN LI+  CK  D+ +   L+ EM  K ++ D
Sbjct: 253 HCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSXKGLKPD 312

Query: 235 LFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR 294
            FTY TLI   CK+G    A   + RM +E I  D V Y +LI G C+EGR  +A ++ R
Sbjct: 313 KFTYTTLIDGCCKEGDLDTAFXHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLR 372

Query: 295 DI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           ++   G  P+  TYT +I+ +C+  D+ +  +L + M
Sbjct: 373 EMLSVGLXPDAGTYTMIINEFCKKGDVWKGSKLLKEM 409


>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
 gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
          Length = 924

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 160/563 (28%), Positives = 270/563 (47%), Gaps = 9/563 (1%)

Query: 24  GHWAKLLNP-NIASSLTSTAIHKVLLNLYNCCHI-PSLSCAFFKWAESAVPNYKHSLQSH 81
           G W +++   +I S L+  A+  +L    +   + P L   FF W+ + +     +  + 
Sbjct: 64  GDWKQVIAASDIPSRLSPAALSSLLRRCNSSPRLHPKLLLDFFYWSRTRLAPSAPAPDAF 123

Query: 82  WTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSH--VLSWLVIF 139
             +   L     +  A  +L+++ +R + + P VL+++ +     D      VL  LV  
Sbjct: 124 AHLAVSLCAAGLYPQANGLLDQM-IRAYPTPPLVLSSVHRALSGSDQGRRPVVLDVLVDT 182

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
           Y      +DG +V   M+   L P L  C  LL  L +    D++WKV   M   G+  +
Sbjct: 183 YKKTGRVRDGAEVVLLMKDLGLAPSLRCCNGLLKDLLRADALDLLWKVRGFMEGAGISPD 242

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
           ++ Y+ LI A CK  D++  +K++ EM       ++ TYNTLI   C+ G   EA   + 
Sbjct: 243 VYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAFGYKK 302

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRAN 317
            ME  G+ PD  TY ++I+G C+ GR  +A+ L  ++   G  PN V Y+TLIDG+ R  
Sbjct: 303 EMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQG 362

Query: 318 DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCN 377
           + +EA ++ + M+A GV P  +TY++++R LCK GR+  A+R+L +M +     D +T N
Sbjct: 363 NADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYN 422

Query: 378 TLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA 437
            +I  + +  +   A  + N M + G+  + +TY  +I+G C+  E + A  LL  M+  
Sbjct: 423 LVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIAD 482

Query: 438 GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYA 497
           G  P+   Y+ L+ GYC + +     + L +     L  D+  Y +LI       K+D A
Sbjct: 483 GLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEA 542

Query: 498 QRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSAS 557
              ++ M   G   +   Y  L + Y  AG  +    +L  M    L     IY      
Sbjct: 543 IEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEG 602

Query: 558 YAK-DN-EILDLFWSHVVDRGLM 578
           Y K DN E +      ++++GLM
Sbjct: 603 YFKSDNLEKVSSTLKSMLEKGLM 625



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 118/471 (25%), Positives = 217/471 (46%), Gaps = 37/471 (7%)

Query: 131 HVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKK 190
           +  S L+  Y  ++  +   +V ++MR      ++     L+  L +    +  +   K+
Sbjct: 244 YTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAFGYKKE 303

Query: 191 MVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGM 250
           M   G+V +   Y  +I+  CK    D+ + LL EM    +  ++  Y+TLI  + ++G 
Sbjct: 304 MEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQGN 363

Query: 251 HYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK------------- 297
             EA  +   M   G+ P+ +TY++LI G C+ GRM  A R+ + +              
Sbjct: 364 ADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNL 423

Query: 298 ------------------------GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKG 333
                                   G +PN  TY+ +I+G C+  + E A  L E M A G
Sbjct: 424 VIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADG 483

Query: 334 VYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAM 393
           + P    Y  ++   C+EG    A   L +M  + + PD    N+LI     +G    A+
Sbjct: 484 LKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAI 543

Query: 394 KVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGY 453
           +  + MLE G   + FTY  LIHG+  A  ++ A++LL  ML++G +P+   Y+ +++GY
Sbjct: 544 EYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGY 603

Query: 454 CNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDS 513
              +N E +   L   + +GL  D  +Y  +I        +  A  + ++++ NG++ DS
Sbjct: 604 FKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDS 663

Query: 514 VIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
           +IY SL   + +A + +    +LD+M ++ +   +  Y +    + K ++I
Sbjct: 664 LIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDI 714



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 121/464 (26%), Positives = 210/464 (45%), Gaps = 39/464 (8%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           + D+M    LMP++   + L++   +    D  +K+ K+M   GV  N   Y+ LI   C
Sbjct: 335 LLDEMSCAGLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLC 394

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           K   + +  ++L +M      AD  TYN +I  + ++    EA  + + M + GISP++ 
Sbjct: 395 KLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVY 454

Query: 272 TYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           TY+ +I+G C+ G    A  L   +   G  PN   Y  LI GYCR      A    + M
Sbjct: 455 TYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKM 514

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
             + + P +  YNS++  L   G++ +A    +EM EK   P++ T   LI+ Y   G+ 
Sbjct: 515 TRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNL 574

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP-------- 441
             A ++ ++ML +GL  + F Y  ++ G+ K+  ++     L  ML+ G  P        
Sbjct: 575 EKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIV 634

Query: 442 --------------SYCS-------------YSWLVDGYCNKNNEEALLKLLDEFVSRGL 474
                         S  S             Y  L+ G+C   + E  + LLDE   +G+
Sbjct: 635 IHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGI 694

Query: 475 CVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSD 534
              +S Y ALI  FCK + + +A+ +FN +   G+  + V YT+L   Y +AG+ +   D
Sbjct: 695 EPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAID 754

Query: 535 ILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFW--SHVVDRG 576
           + ++M    +     +Y   +A  +   ++    +    ++ RG
Sbjct: 755 LYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARG 798



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 109/359 (30%), Positives = 177/359 (49%), Gaps = 2/359 (0%)

Query: 190 KMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKG 249
           +M + G+  N++ Y+++I+  C+  + ++   LL +M    ++ + F Y  LI+ YC++G
Sbjct: 443 EMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREG 502

Query: 250 MHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYT 307
               A     +M RE ++PD+  YNSLI G    G+M EA   + ++  KG  PN  TY 
Sbjct: 503 SFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYG 562

Query: 308 TLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEK 367
            LI GY  A +LE+A +L   M   G+ P    Y  IL    K   +   +  L  M EK
Sbjct: 563 GLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEK 622

Query: 368 KIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIA 427
            + PDN     +I+     G   +A+ V + + + GL+ D   Y +LI GFCKA +M+ A
Sbjct: 623 GLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKA 682

Query: 428 KELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRR 487
             LL  M   G  P    Y+ L+DG+C  ++      + +  + +GL  +   Y  LI  
Sbjct: 683 VGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDG 742

Query: 488 FCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMI 546
           +CK   +  A  L+N M   G+  D+ +Y+ LA     +G+ +    I ++M  R   I
Sbjct: 743 YCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARGYAI 801



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 111/477 (23%), Positives = 215/477 (45%), Gaps = 51/477 (10%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           ++   + ++MR   + P+++  ++++N L +   ++    + ++M+  G+  N  +Y  L
Sbjct: 435 EEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPL 494

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           I   C+        + L +M  +++  DL+ YN+LI      G   EA+   D M  +G 
Sbjct: 495 ISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGF 554

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEE--- 321
            P+  TY  LIHG+   G + +A +L   +   G  PN   Y  +++GY ++++LE+   
Sbjct: 555 QPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSS 614

Query: 322 --------------------------------ALRLREVMAAKGVYPGVVTYNSILRKLC 349
                                           A+ +  V+   G+ P  + Y S++   C
Sbjct: 615 TLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFC 674

Query: 350 KEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQF 409
           K   +  A  LL+EM +K I P     N LI+ +CK  D + A  + N ++  GL  +  
Sbjct: 675 KAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCV 734

Query: 410 TYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEF 469
           TY  LI G+CKA ++  A +L   ML  G +P    YS L  G  N  + +  L + +E 
Sbjct: 735 TYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEM 794

Query: 470 VSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEP 529
           ++RG  + +S +  L+  FCK+ K+    +  ++M    I+   +   ++      AG+ 
Sbjct: 795 IARGYAI-ISSFNTLVHGFCKRGKLQETVKFLHVMMDKDIVPSLLTVENIVIGLGEAGKL 853

Query: 530 KACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKEM 586
                I  ++ ++            +AS+ +D + L   ++ ++++GL+   +   M
Sbjct: 854 SEAHTIFVELQQK------------NASH-RDTDHLSSLFTDMINQGLVPLDVIHNM 897



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 103/386 (26%), Positives = 178/386 (46%), Gaps = 3/386 (0%)

Query: 122 IHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLT 181
           I D    N+ V + L+  Y          +   +M   NL P L+    L+  L+     
Sbjct: 480 IADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKM 539

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
           D   + Y +M++ G   N   Y  LIH    + +++K E+LL +M    +  + F Y  +
Sbjct: 540 DEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQI 599

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GA 299
           +  Y K     +  +    M  +G+ PD   Y  +IH     G M+ A  +   I+  G 
Sbjct: 600 LEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGL 659

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
            P+ + Y +LI G+C+A D+E+A+ L + MA KG+ PG+  YN+++   CK   I  A  
Sbjct: 660 VPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARN 719

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
           + N +  K + P+ VT  TLI+ YCK GD   A+ + N ML  G+  D F Y  L  G  
Sbjct: 720 IFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCS 779

Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
            + ++  A  +   M+  G++    S++ LV G+C +   +  +K L   + + +   + 
Sbjct: 780 NSGDLQQALFITEEMIARGYA-IISSFNTLVHGFCKRGKLQETVKFLHVMMDKDIVPSLL 838

Query: 480 VYRALIRRFCKKEKVDYAQRLFNLMQ 505
               ++    +  K+  A  +F  +Q
Sbjct: 839 TVENIVIGLGEAGKLSEAHTIFVELQ 864



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 59/275 (21%), Positives = 113/275 (41%), Gaps = 41/275 (14%)

Query: 81  HWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFY 140
           + ++I    K    + A  +L+++A +      S  NAL+      D  SH  +      
Sbjct: 666 YGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARN------ 719

Query: 141 ANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANI 200
                      +F+ +    L P+    T L++   K         +Y +M+  GV  + 
Sbjct: 720 -----------IFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDA 768

Query: 201 HLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDR 260
            +Y+VL   C  S D+ +   +  EM  +   A + ++NTL+  +CK+G   E +     
Sbjct: 769 FVYSVLAAGCSNSGDLQQALFITEEMIARGY-AIISSFNTLVHGFCKRGKLQETVKFLHV 827

Query: 261 MEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK----------------------G 298
           M  + I P ++T  +++ G    G++ EA  +F +++                      G
Sbjct: 828 MMDKDIVPSLLTVENIVIGLGEAGKLSEAHTIFVELQQKNASHRDTDHLSSLFTDMINQG 887

Query: 299 ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKG 333
             P  V +  +I  +C+   L++AL L + + AKG
Sbjct: 888 LVPLDVIHN-MIQSHCKQGYLDKALMLHDALVAKG 921


>gi|255660780|gb|ACU25559.1| pentatricopeptide repeat-containing protein [Verbena macdougalii]
          Length = 418

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 118/404 (29%), Positives = 220/404 (54%), Gaps = 3/404 (0%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS-VLNALVKIHDDPDGNSH 131
            ++H+LQS+ TMIH L  ++    A+ +++ +  R    + S V  A+++       + +
Sbjct: 8   TFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIY 67

Query: 132 VLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKM 191
           V S L+  Y      +D ++ +   + H        C  +L  L K +   +VW  Y++ 
Sbjct: 68  VFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEES 127

Query: 192 VQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMH 251
           ++ G  A+++ +N+L+H+  K  ++   + +   +    +R  + ++NTL+  Y K G  
Sbjct: 128 LECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDL 187

Query: 252 YEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTL 309
            E   +++ M+  G+ PD+ TY+ LI+G C+E +M +A  LF ++   G  PN VT+TTL
Sbjct: 188 DEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTL 247

Query: 310 IDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI 369
           IDG+C+   ++ A+ + + M ++ + P ++TYN+++  LCK+G ++ A  L++EM+ K +
Sbjct: 248 IDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGL 307

Query: 370 APDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKE 429
            PD +T  TLI+  CK GD  +A + + RM++  + LD   Y ALI G C+      A++
Sbjct: 308 KPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEK 367

Query: 430 LLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
           +L  ML  G  P   +Y+ +++ +C K +     KLL E    G
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 90/283 (31%), Positives = 148/283 (52%), Gaps = 2/283 (0%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           G    +  +N L+H F +EG +R A+ +F  I      P+ V++ TL++GY +  DL+E 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEG 190

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            RL+  M A GV P V TY+ ++  LCKE ++ DAN L +EM +  + P+ VT  TLI+ 
Sbjct: 191 FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDG 250

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +CK G    AM++  +ML   L  D  TY  LI+G CK  ++  A++L+  M   G  P 
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPD 310

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ L+DG C + + E   +     +   + +D   Y ALI   C++ +   A+++  
Sbjct: 311 KITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLR 370

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
            M   G+  +   YT +   + + G+    S +L +M R   M
Sbjct: 371 EMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGCM 413



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 90/317 (28%), Positives = 152/317 (47%), Gaps = 29/317 (9%)

Query: 66  WAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKI---ALRDFLSTPSVLNALVKI 122
           + ES    Y  SL     ++H   K    + AQ++ + I   +LR     PSV++     
Sbjct: 124 YEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLR-----PSVVS----- 173

Query: 123 HDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTD 182
                      + L+  Y  L    +G ++ + M+   + P ++  +VL+N L K+   D
Sbjct: 174 ----------FNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMD 223

Query: 183 MVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLI 242
              +++ +M+  G+V N   +  LI   CK+  VD   ++  +M  + +  DL TYNTLI
Sbjct: 224 DANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLI 283

Query: 243 ALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA----RRLFRDIKG 298
              CKKG   +A  + D M  +G+ PD +TY +LI G C+EG +  A    +R+ ++   
Sbjct: 284 YGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKE--N 341

Query: 299 ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDAN 358
              + V YT LI G C+     +A ++   M + G+ P + TY  I+ + CK+G +   +
Sbjct: 342 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGS 401

Query: 359 RLLNEMNEKKIAPDNVT 375
           +LL EM      P  VT
Sbjct: 402 KLLKEMQRDGCMPSVVT 418



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 96/344 (27%), Positives = 156/344 (45%), Gaps = 45/344 (13%)

Query: 232 RADLFTYNTLIALYCKKGMHYEALA-VQDRMEREGISP-----------------DIVTY 273
           R  L +Y T+I   C   M  EA   +Q  + R+G                    DI  +
Sbjct: 10  RHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVF 69

Query: 274 NSLIHGFCREGRMREARRLFRDIKGATPNH---VTYTTLIDGYCRANDLEEALRLREVMA 330
           + LI  +   G +R+A   +R     T  H   V + T     CR   LE  ++L+    
Sbjct: 70  SGLITAYLESGFLRDAIECYR----LTKEHKFRVPFDT-----CRKV-LEHLMKLKYFKL 119

Query: 331 AKGVY---------PGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
             G Y           +  +N ++    KEG IR A  + + + +  + P  V+ NTL+N
Sbjct: 120 VWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMN 179

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
            Y K+GD     ++KN M  +G+  D +TY  LI+G CK  +MD A EL   MLD G  P
Sbjct: 180 GYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVP 239

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
           +  +++ L+DG+C     +  +++  + +S+ L  D+  Y  LI   CKK  +  AQ L 
Sbjct: 240 NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLI 299

Query: 502 NLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
           + M   G+  D + YT+L     + G+ +   +     YR+R++
Sbjct: 300 DEMSMKGLKPDKITYTTLIDGNCKEGDLETAFE-----YRKRMI 338


>gi|255660794|gb|ACU25566.1| pentatricopeptide repeat-containing protein [Verbena montevidensis]
          Length = 418

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 119/404 (29%), Positives = 220/404 (54%), Gaps = 3/404 (0%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS-VLNALVKIHDDPDGNSH 131
            ++H+LQS+ TMIH L   +    A+ +++ +  R    + S V  A+++       + +
Sbjct: 8   TFRHTLQSYCTMIHFLCTQQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIY 67

Query: 132 VLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKM 191
           V S L+  Y      +D ++ +   + H        C  +L  L K +   +VW  Y++ 
Sbjct: 68  VFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEES 127

Query: 192 VQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMH 251
           ++ G  A+++ +N+L+H+  K  ++   + +   +    +R  + ++NTL+  Y K G  
Sbjct: 128 LECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDL 187

Query: 252 YEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTL 309
            E   +++ M+  G+ PD+ TY+ LI+G C+E +M +A  LF ++  KG  PN VT+TTL
Sbjct: 188 DEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTL 247

Query: 310 IDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI 369
           IDG+C+   ++ A+ + + M ++ + P ++TYN+++  LCK+G ++ A  L++EM  K +
Sbjct: 248 IDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGL 307

Query: 370 APDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKE 429
            PD +T  TLI+  CK GD  +A + + RM++  + LD   Y ALI G C+      A++
Sbjct: 308 XPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEK 367

Query: 430 LLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
           +L  ML+ G  P   +Y+ +++ +C K +     KLL E    G
Sbjct: 368 MLREMLNVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 90/283 (31%), Positives = 149/283 (52%), Gaps = 2/283 (0%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           G    +  +N L+H F +EG +R A+ +F  I      P+ V++ TL++GY +  DL+E 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEG 190

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            RL+  M   GV P V TY+ ++  LCKE ++ DAN L +EM +K + P+ VT  TLI+ 
Sbjct: 191 FRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDG 250

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +CK G    AM++  +ML   L  D  TY  LI+G CK  ++  A++L+  M+  G  P 
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPD 310

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ L+DG C + + E   +     +   + +D   Y ALI   C++ +   A+++  
Sbjct: 311 KITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLR 370

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
            M   G+  +   YT +   + + G+    S +L +M R   M
Sbjct: 371 EMLNVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYM 413



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 89/318 (27%), Positives = 151/318 (47%), Gaps = 31/318 (9%)

Query: 66  WAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKI---ALR-DFLSTPSVLNALVK 121
           + ES    Y  SL     ++H   K    + AQ++ + I   +LR   +S  +++N  +K
Sbjct: 124 YEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIK 183

Query: 122 IHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLT 181
           + D                       +G ++ + M+V  + P ++  +VL+N L K+   
Sbjct: 184 LGD---------------------LDEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKM 222

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
           D    ++ +M+  G+V N   +  LI   CK+  VD   ++  +M  + +  DL TYNTL
Sbjct: 223 DDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTL 282

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA----RRLFRDIK 297
           I   CKKG   +A  + D M  +G+ PD +TY +LI G C+EG +  A    +R+ ++  
Sbjct: 283 IYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYTTLIDGNCKEGDLETAFEYRKRMIKE-- 340

Query: 298 GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDA 357
               + V YT LI G C+     +A ++   M   G+ P + TY  I+ + CK+G +   
Sbjct: 341 NIRLDDVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPEIGTYTMIINEFCKKGDVWTG 400

Query: 358 NRLLNEMNEKKIAPDNVT 375
           ++LL EM      P  VT
Sbjct: 401 SKLLKEMQRDGYMPSVVT 418



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 95/344 (27%), Positives = 156/344 (45%), Gaps = 45/344 (13%)

Query: 232 RADLFTYNTLIALYCKKGMHYEALA-VQDRMEREGISP-----------------DIVTY 273
           R  L +Y T+I   C + M  EA   +Q  + R+G                    DI  +
Sbjct: 10  RHTLQSYCTMIHFLCTQQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVF 69

Query: 274 NSLIHGFCREGRMREARRLFRDIKGATPNH---VTYTTLIDGYCRANDLEEALRLREVMA 330
           + LI  +   G +R+A   +R     T  H   V + T     CR   LE  ++L+    
Sbjct: 70  SGLITAYLESGFLRDAIECYR----LTKEHKFRVPFDT-----CRKV-LEHLMKLKYFKL 119

Query: 331 AKGVY---------PGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
             G Y           +  +N ++    KEG IR A  + + + +  + P  V+ NTL+N
Sbjct: 120 VWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMN 179

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
            Y K+GD     ++KN M  +G+  D +TY  LI+G CK  +MD A  L   MLD G  P
Sbjct: 180 GYIKLGDLDEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVP 239

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
           +  +++ L+DG+C     +  +++  + +S+ L  D+  Y  LI   CKK  +  AQ L 
Sbjct: 240 NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLI 299

Query: 502 NLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
           + M   G+  D + YT+L     + G+ +   +     YR+R++
Sbjct: 300 DEMIMKGLXPDKITYTTLIDGNCKEGDLETAFE-----YRKRMI 338


>gi|255660778|gb|ACU25558.1| pentatricopeptide repeat-containing protein [Verbena bracteata]
          Length = 418

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 118/404 (29%), Positives = 220/404 (54%), Gaps = 3/404 (0%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS-VLNALVKIHDDPDGNSH 131
            ++H+LQS+ TMIH L  ++    A+ +++ +  R    + S V  A+++       + +
Sbjct: 8   TFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIY 67

Query: 132 VLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKM 191
           V S L+  Y      +D ++ +   + H        C  +L  L K +   +VW  Y++ 
Sbjct: 68  VFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEES 127

Query: 192 VQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMH 251
           ++ G  A+++ +N+L+H+  K  ++   + +   +    +R  + ++NTL+  Y K G  
Sbjct: 128 LECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDL 187

Query: 252 YEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTL 309
            E   +++ M+  G+ PD+ TY+ LI+G C+E +M +A  LF ++   G  PN VT+TTL
Sbjct: 188 DEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTL 247

Query: 310 IDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI 369
           IDG+C+   ++ A+ + + M ++ + P ++TYN+++  LCK+G ++ A  L++EM+ K +
Sbjct: 248 IDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGL 307

Query: 370 APDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKE 429
            PD +T  TLI+  CK GD  +A + + RM++  + LD   Y ALI G C+      A++
Sbjct: 308 KPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEK 367

Query: 430 LLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
           +L  ML  G  P   +Y+ +++ +C K +     KLL E    G
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 90/283 (31%), Positives = 148/283 (52%), Gaps = 2/283 (0%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           G    +  +N L+H F +EG +R A+ +F  I      P+ V++ TL++GY +  DL+E 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEG 190

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            RL+  M A GV P V TY+ ++  LCKE ++ DAN L +EM +  + P+ VT  TLI+ 
Sbjct: 191 FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDG 250

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +CK G    AM++  +ML   L  D  TY  LI+G CK  ++  A++L+  M   G  P 
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPD 310

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ L+DG C + + E   +     +   + +D   Y ALI   C++ +   A+++  
Sbjct: 311 KITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLR 370

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
            M   G+  +   YT +   + + G+    S +L +M R   M
Sbjct: 371 EMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYM 413



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 90/317 (28%), Positives = 152/317 (47%), Gaps = 29/317 (9%)

Query: 66  WAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKI---ALRDFLSTPSVLNALVKI 122
           + ES    Y  SL     ++H   K    + AQ++ + I   +LR     PSV++     
Sbjct: 124 YEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLR-----PSVVS----- 173

Query: 123 HDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTD 182
                      + L+  Y  L    +G ++ + M+   + P ++  +VL+N L K+   D
Sbjct: 174 ----------FNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMD 223

Query: 183 MVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLI 242
              +++ +M+  G+V N   +  LI   CK+  VD   ++  +M  + +  DL TYNTLI
Sbjct: 224 DANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLI 283

Query: 243 ALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA----RRLFRDIKG 298
              CKKG   +A  + D M  +G+ PD +TY +LI G C+EG +  A    +R+ ++   
Sbjct: 284 YGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKE--N 341

Query: 299 ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDAN 358
              + V YT LI G C+     +A ++   M + G+ P + TY  I+ + CK+G +   +
Sbjct: 342 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGS 401

Query: 359 RLLNEMNEKKIAPDNVT 375
           +LL EM      P  VT
Sbjct: 402 KLLKEMQRDGYMPSVVT 418



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 96/344 (27%), Positives = 156/344 (45%), Gaps = 45/344 (13%)

Query: 232 RADLFTYNTLIALYCKKGMHYEALA-VQDRMEREGISP-----------------DIVTY 273
           R  L +Y T+I   C   M  EA   +Q  + R+G                    DI  +
Sbjct: 10  RHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVF 69

Query: 274 NSLIHGFCREGRMREARRLFRDIKGATPNH---VTYTTLIDGYCRANDLEEALRLREVMA 330
           + LI  +   G +R+A   +R     T  H   V + T     CR   LE  ++L+    
Sbjct: 70  SGLITAYLESGFLRDAIECYR----LTKEHKFRVPFDT-----CRKV-LEHLMKLKYFKL 119

Query: 331 AKGVY---------PGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
             G Y           +  +N ++    KEG IR A  + + + +  + P  V+ NTL+N
Sbjct: 120 VWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMN 179

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
            Y K+GD     ++KN M  +G+  D +TY  LI+G CK  +MD A EL   MLD G  P
Sbjct: 180 GYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVP 239

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
           +  +++ L+DG+C     +  +++  + +S+ L  D+  Y  LI   CKK  +  AQ L 
Sbjct: 240 NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLI 299

Query: 502 NLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
           + M   G+  D + YT+L     + G+ +   +     YR+R++
Sbjct: 300 DEMSMKGLKPDKITYTTLIDGNCKEGDLETAFE-----YRKRMI 338


>gi|410109919|gb|AFV61039.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           duartei]
          Length = 412

 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 123/410 (30%), Positives = 220/410 (53%), Gaps = 3/410 (0%)

Query: 79  QSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS-VLNALVKIHDDPDGNSHVLSWLV 137
            S+ TMIH L  ++    A+++++ +  R    + S V  A+++       + +V S L+
Sbjct: 1   HSYCTMIHFLCTHQMLLEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLI 60

Query: 138 IFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVV 197
             Y      +D ++ +   R H        C  +L  L K +   +VW  Y+++++ G  
Sbjct: 61  AAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYP 120

Query: 198 ANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAV 257
           A+++ +N+L+H  CK  D+   + +   +    +R  + +YNTL+  Y + G   E   +
Sbjct: 121 ASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRXGDLDEGFXL 180

Query: 258 QDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCR 315
           +  M   G+ PD+ TY+ LI+G C+E +M +A  LF +  +KG  PN VT+TTLIDG+C+
Sbjct: 181 KSXMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCK 240

Query: 316 ANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVT 375
              ++ A+ + + M ++ + P ++TYN+++  LCK+G ++ A+ L++EM+ K + PD +T
Sbjct: 241 NGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKIT 300

Query: 376 CNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGML 435
             TLIN  CK GD  SA + + RM++  + LD+  Y ALI G C+      A+++L  ML
Sbjct: 301 YTTLINGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGXCQEGRSVDAEKMLREML 360

Query: 436 DAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
             G  P   +Y+ +++ +C   +     KLL E    G    V  Y  L+
Sbjct: 361 SVGLKPDARTYTMIINEFCKXGDVWXGSKLLKEMQRDGHVPSVVTYNVLM 410



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 102/348 (29%), Positives = 168/348 (48%), Gaps = 39/348 (11%)

Query: 232 RADLFTYNTLIALYCKKGMHYEALAVQDRMERE--------------------------- 264
           R+D++ ++ LIA Y + G   +A+    R+ RE                           
Sbjct: 50  RSDIYVFSGLIAAYLESGFLRDAIECY-RLTREHKFWVPFDTCRKVLEHLMKLKYFKLVW 108

Query: 265 ---------GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGY 313
                    G    +  +N L+H FC++G +R A+ +F  I   G  P+ V+Y TL++GY
Sbjct: 109 GFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGY 168

Query: 314 CRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDN 373
            R  DL+E   L+  M A GV P V TY+ ++  LCKE ++ DAN L +EM  K + P+ 
Sbjct: 169 IRXGDLDEGFXLKSXMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNG 228

Query: 374 VTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFG 433
           VT  TLI+ +CK G    AM++  +ML   L  D  TY  LI+G CK  ++  A  L+  
Sbjct: 229 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDE 288

Query: 434 MLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEK 493
           M   G  P   +Y+ L++G C + + ++  +     +   + +D   Y ALI   C++ +
Sbjct: 289 MSVKGLKPDKITYTTLINGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGXCQEGR 348

Query: 494 VDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
              A+++   M   G+  D+  YT +   + + G+    S +L +M R
Sbjct: 349 SVDAEKMLREMLSVGLKPDARTYTMIINEFCKXGDVWXGSKLLKEMQR 396



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 86/319 (26%), Positives = 145/319 (45%), Gaps = 34/319 (10%)

Query: 237 TYNTLIALYCKKGMHYEALA-VQDRMEREGISP-----------------DIVTYNSLIH 278
           +Y T+I   C   M  EA + +Q  + R+G                    DI  ++ LI 
Sbjct: 2   SYCTMIHFLCTHQMLLEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLIA 61

Query: 279 GFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGV 338
            +   G +R+A   +R     T  H  +       CR   LE  ++L+      G Y  +
Sbjct: 62  AYLESGFLRDAIECYR----LTREHKFWVPF--DTCRKV-LEHLMKLKYFKLVWGFYEEI 114

Query: 339 VT---------YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
           +          +N ++ + CK+G IR A  + + + +  + P  V+ NTL+N Y + GD 
Sbjct: 115 LECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRXGDL 174

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
                +K+ ML +G+  D +TY  LI+G CK  +MD A EL   ML  G  P+  +++ L
Sbjct: 175 DEGFXLKSXMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTL 234

Query: 450 VDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGI 509
           +DG+C     +  +++  + +S+ L  D+  Y  LI   CKK  +  A  L + M   G+
Sbjct: 235 IDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGL 294

Query: 510 LGDSVIYTSLAYAYWRAGE 528
             D + YT+L     + G+
Sbjct: 295 KPDKITYTTLINGCCKEGD 313



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 65/288 (22%), Positives = 120/288 (41%), Gaps = 20/288 (6%)

Query: 272 TYNSLIHGFCREGRMREARRLFR-------------------DIKGATPNHV-TYTTLID 311
           +Y ++IH  C    + EA+ L +                   + KG   + +  ++ LI 
Sbjct: 2   SYCTMIHFLCTHQMLLEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLIA 61

Query: 312 GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAP 371
            Y  +  L +A+    +      +    T   +L  L K    +       E+ E     
Sbjct: 62  AYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPA 121

Query: 372 DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
                N L++ +CK GD   A  V + + + GL     +Y  L++G+ +  ++D    L 
Sbjct: 122 SLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRXGDLDEGFXLK 181

Query: 432 FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
             ML +G  P   +YS L++G C ++  +   +L DE + +GL  +   +  LI   CK 
Sbjct: 182 SXMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKN 241

Query: 492 EKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
            +VD A  ++  M    +  D + Y +L Y   + G+ K    ++D+M
Sbjct: 242 GRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEM 289



 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 62/129 (48%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
            + D+M V  L P     T L+N   K+   D  ++  K+M+Q  +  +   Y  LI   
Sbjct: 284 HLIDEMSVKGLKPDKITYTTLINGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGX 343

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           C+       EK+L EM    ++ D  TY  +I  +CK G  +    +   M+R+G  P +
Sbjct: 344 CQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKXGDVWXGSKLLKEMQRDGHVPSV 403

Query: 271 VTYNSLIHG 279
           VTYN L++G
Sbjct: 404 VTYNVLMNG 412


>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
          Length = 748

 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 144/528 (27%), Positives = 255/528 (48%), Gaps = 55/528 (10%)

Query: 59  LSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSV--- 115
           L  +FF+WA         SL++   +  I T +K  K A+ +++     DF   P++   
Sbjct: 110 LVLSFFEWA---CLRRDPSLEARCIVAQIATASKDLKMARKLIQ-----DFWVNPNLDVG 161

Query: 116 ------LNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACT 169
                 +  L+  + D   +  V            M  +  ++FD+M  + L+  + +C 
Sbjct: 162 VSFGHFVEQLIYTYKDWGSDPRVFDIFFQVLVEAGMLDEARKLFDKMLNYGLLISVDSCN 221

Query: 170 VLLNSLAKD-RLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEF 228
           + ++ L++D     +  KV+ +  ++GV  N   YN++ H+ C+   V +  +LL +ME 
Sbjct: 222 LFISHLSEDLDGIKIALKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMEL 281

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
           +    D+ +Y+T+I  YC+ G     L + + M+ +G+ P+  TYN +I   C+ G++ E
Sbjct: 282 RGCIPDVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAE 341

Query: 289 ARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILR 346
           A R+ R++  +G  P+ V YTTLIDG+C+  ++  A RL + M  + + P  +TY +++ 
Sbjct: 342 AERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVIC 401

Query: 347 KLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLM- 405
            LC+ GR+ +A++L +EM  K++ PD VT   LI+ YCK G    A  + N+ML+ GL  
Sbjct: 402 GLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTP 461

Query: 406 ----------------------------------LDQFTYKALIHGFCKAKEMDIAKELL 431
                                             L+ +TY +L++G CKA  +D A +L+
Sbjct: 462 NIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLM 521

Query: 432 FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
             M  AGF P   +Y+ L+D YC         +LL + + R L   V  +  L+  FC  
Sbjct: 522 KDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMS 581

Query: 492 EKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
             ++  ++L   M   GI+ ++  Y SL   Y      +A ++I   M
Sbjct: 582 GMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGM 629



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 131/418 (31%), Positives = 217/418 (51%), Gaps = 2/418 (0%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           Q+  QM +   +P + + + ++N   +      V K+ ++M   G+  N + YN +I   
Sbjct: 274 QLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLL 333

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           CK+  V + E++L EM  + +  D   Y TLI  +CK G    A  + D M++  ISPD 
Sbjct: 334 CKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDF 393

Query: 271 VTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
           +TY ++I G C+ GR+ EA +LF ++  K   P+ VTYT LIDGYC+   ++EA  L   
Sbjct: 394 ITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQ 453

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M   G+ P +VTY ++   LCK G +  AN LL+EM  K +  +  T N+L+N  CK G+
Sbjct: 454 MLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGN 513

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
              A+K+   M  AG   D  TY  L+  +CK++EM  A ELL  MLD    P+  +++ 
Sbjct: 514 IDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNV 573

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG 508
           L++G+C     E   KLL   + +G+  + + Y +LI+++C +  +     ++  M   G
Sbjct: 574 LMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKG 633

Query: 509 ILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
           ++ D   Y  L   + +A   K    +  DM  +   +T+  Y +    + K  + L+
Sbjct: 634 VVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLE 691



 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 129/432 (29%), Positives = 217/432 (50%), Gaps = 4/432 (0%)

Query: 126 PDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVW 185
           PD  S+  S ++  Y  +   Q  L++ ++M++  L P+ +    ++  L K        
Sbjct: 286 PDVISY--STVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAE 343

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
           +V ++M+  G+  +  +Y  LI   CK  +V    +L  EM+ + +  D  TY  +I   
Sbjct: 344 RVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGL 403

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNH 303
           C+ G   EA  +   M  + + PD VTY +LI G+C+EG+M+EA  L   +   G TPN 
Sbjct: 404 CQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNI 463

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
           VTYT L DG C+  +++ A  L   M  KG+   + TYNS++  LCK G I  A +L+ +
Sbjct: 464 VTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKD 523

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
           M      PD VT  TL++AYCK  +   A ++  +ML+  L     T+  L++GFC +  
Sbjct: 524 MEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGM 583

Query: 424 MDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRA 483
           ++  ++LL  ML+ G  P+  +Y+ L+  YC +NN  A  ++     ++G+  D + Y  
Sbjct: 584 LEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNI 643

Query: 484 LIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRR 543
           LI+  CK   +  A  L   M G G       Y +L   +++  +     ++ + M R  
Sbjct: 644 LIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREG 703

Query: 544 LMITLKIYRSFS 555
           L+   +IY  F+
Sbjct: 704 LVADREIYNIFA 715



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 128/479 (26%), Positives = 230/479 (48%), Gaps = 20/479 (4%)

Query: 80  SHWTMIHILTKNKHFKSAQNMLEKIALR----DFLSTPSVLNALVKIHD----------- 124
           S+  + H L +      A  +L ++ LR    D +S  +V+N   ++ +           
Sbjct: 255 SYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEM 314

Query: 125 ---DPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLT 181
                  N +  + +++         +  +V  +M    + P     T L++   K    
Sbjct: 315 QIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNV 374

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
              ++++ +M +  +  +   Y  +I   C++  V + +KL  EM  K +  D  TY  L
Sbjct: 375 SSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTAL 434

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGA 299
           I  YCK+G   EA ++ ++M + G++P+IVTY +L  G C+ G +  A  L  ++  KG 
Sbjct: 435 IDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGL 494

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
             N  TY +L++G C+A ++++A++L + M   G +P  VTY +++   CK   +  A+ 
Sbjct: 495 ELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHE 554

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
           LL +M ++++ P  VT N L+N +C  G      K+   MLE G+M +  TY +LI  +C
Sbjct: 555 LLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYC 614

Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
               M    E+  GM   G  P   +Y+ L+ G+C   N +    L  + V +G  + VS
Sbjct: 615 IRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVS 674

Query: 480 VYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDD 538
            Y ALI+ F K++K   A+ LF  M+  G++ D  IY   A   +  G+ +   ++ D+
Sbjct: 675 SYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLELCDE 733



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 100/332 (30%), Positives = 160/332 (48%), Gaps = 2/332 (0%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           ++F +M    L P     T L++   K+      + ++ +M+Q+G+  NI  Y  L    
Sbjct: 414 KLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGL 473

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           CK  +VD   +LL EM  K +  +++TYN+L+   CK G   +A+ +   ME  G  PD 
Sbjct: 474 CKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDA 533

Query: 271 VTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
           VTY +L+  +C+   M  A  L R +  +   P  VT+  L++G+C +  LE+  +L + 
Sbjct: 534 VTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKW 593

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M  KG+ P   TYNS++++ C    +R    +   M  K + PD  T N LI  +CK  +
Sbjct: 594 MLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARN 653

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
              A  +   M+  G  L   +Y ALI GF K K+   A+EL   M   G       Y+ 
Sbjct: 654 MKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNI 713

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSV 480
             D   ++   E  L+L DE + + L  D+  
Sbjct: 714 FADINYDEGKMELTLELCDEAIEKCLVGDIQT 745



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 104/232 (44%), Gaps = 2/232 (0%)

Query: 149 GLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIH 208
            +++   M V    P     T L+++  K R      ++ ++M+   +   +  +NVL++
Sbjct: 517 AVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMN 576

Query: 209 ACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISP 268
             C S  ++  EKLL  M  K +  +  TYN+LI  YC +        +   M  +G+ P
Sbjct: 577 GFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVP 636

Query: 269 DIVTYNSLIHGFCREGRMREARRLFRDIKGATPNHV--TYTTLIDGYCRANDLEEALRLR 326
           D  TYN LI G C+   M+EA  L RD+ G   N    +Y  LI G+ +     EA  L 
Sbjct: 637 DGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELF 696

Query: 327 EVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT 378
           E M  +G+      YN        EG++     L +E  EK +  D  T NT
Sbjct: 697 EQMRREGLVADREIYNIFADINYDEGKMELTLELCDEAIEKCLVGDIQTKNT 748


>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
 gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
          Length = 497

 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 139/458 (30%), Positives = 229/458 (50%), Gaps = 5/458 (1%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           SVL  + K+   P  N    S L+   ++     D +++FD+M      P +   + ++N
Sbjct: 33  SVLGNMFKLGLQP--NHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYSTIIN 90

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
            L K   T M  ++ KKM + G   N+ +Y+ +I + CK   + +  + L EM  + +  
Sbjct: 91  GLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISP 150

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           ++ TY++++  +C  G   EA ++  +M    + PD VT+N L+ G  +EG + EA+ +F
Sbjct: 151 NVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVF 210

Query: 294 RDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
             +  KG  PN  TY  L+DGYC  + ++EA +L  +M  KG  P V +YN +++  CK 
Sbjct: 211 ETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKS 270

Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
           GRI +A  LL EM+ K + PD VT +TL+  +C+ G    A K+   M   GL+ D  TY
Sbjct: 271 GRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTY 330

Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
             ++ G CK   +D A ELL  M ++   P+   Y+ L+ G CN    EA  +L      
Sbjct: 331 SIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFV 390

Query: 472 RGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKA 531
           +G+  DV  Y  +I    K    + A  LF  M  +G L +S  Y  +   + R G+   
Sbjct: 391 KGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSN 450

Query: 532 CSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFW 569
              ++++M  R        ++  S   ++D EI+ LF 
Sbjct: 451 AGRLIEEMVGRGFSADSSTFQMLSDLESRD-EIISLFM 487



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 54/219 (24%), Positives = 96/219 (43%), Gaps = 6/219 (2%)

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTAS--AMKVKNRMLEAGLMLDQFTYKALIHGFC-K 420
           M+   I PD  T   LIN +C         A  V   M + GL  +  T+  L++G   K
Sbjct: 1   MDLSNIRPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSK 60

Query: 421 AKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSV 480
           AK +D  K L   M+  G+ P   +YS +++G C   +    ++LL +   +G   +V V
Sbjct: 61  AKIIDAVK-LFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVV 119

Query: 481 YRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMY 540
           Y  +I   CK + +  A    + M   GI  + V Y+S+ + +   G     + +   M 
Sbjct: 120 YSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMV 179

Query: 541 RRRLMITLKIYRSFSASYAKDNEILDL--FWSHVVDRGL 577
            R +M     +       +K+  IL+    +  ++++G+
Sbjct: 180 ERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGV 218


>gi|410109895|gb|AFV61027.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           urticoides]
          Length = 412

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 125/410 (30%), Positives = 220/410 (53%), Gaps = 3/410 (0%)

Query: 79  QSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS-VLNALVKIHDDPDGNSHVLSWLV 137
            S+ TMIH L  ++    A++++E +  R    + S V  A+++   +   + +V S L+
Sbjct: 1   HSYCTMIHFLCTHQXLSEAKSLIEVVVSRKGKGSASAVFAAVLETXGNQRSDIYVFSGLI 60

Query: 138 IFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVV 197
             Y      +D ++ +   R H L      C  +L  L K +   +VW  Y+++++ G  
Sbjct: 61  TAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYP 120

Query: 198 ANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAV 257
           A+++ +N+L+H  CK  D+   + +   +    +R  + +YNTL+  Y + G   E   +
Sbjct: 121 ASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL 180

Query: 258 QDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCR 315
           +  M   G+ PD+ TY+ LI+G C+E +M  A  LF +  +KG  PN VT+TTLIDG+C+
Sbjct: 181 KSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGHCK 240

Query: 316 ANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVT 375
              ++ A+ + + M ++ + P ++TYN+++  LCK+G ++ A+ L++EM+ K + PD  T
Sbjct: 241 NGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFT 300

Query: 376 CNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGML 435
             TLI+  CK GD  +A + + RM++  + LD   Y ALI G C+      A+++L  ML
Sbjct: 301 YTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREML 360

Query: 436 DAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
             G  P   +Y+ +V+ +C K +     KLL E    G    V  Y  L+
Sbjct: 361 SVGLKPDTGTYTMIVNEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLM 410



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 92/279 (32%), Positives = 149/279 (53%), Gaps = 2/279 (0%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           G    +  +N L+H FC++G +R A+ +F  I   G  P+ V+Y TL++GY R  DL+E 
Sbjct: 118 GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEG 177

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            RL+  M A GV P V TY+ ++  LCKE ++  AN L +EM  K + P+ VT  TLI+ 
Sbjct: 178 FRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDG 237

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +CK G    AM++  +ML   L+ D  TY  LI+G CK  ++  A +L+  M   G  P 
Sbjct: 238 HCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPD 297

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ L+DG C + + +   +     +   + +D   Y ALI   C++ +   A+++  
Sbjct: 298 KFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLR 357

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
            M   G+  D+  YT +   + + G+    S +L +M R
Sbjct: 358 EMLSVGLKPDTGTYTMIVNEFCKKGDVWKGSKLLKEMQR 396



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 75/269 (27%), Positives = 129/269 (47%), Gaps = 16/269 (5%)

Query: 269 DIVTYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
           DI  ++ LI  +   G +R+A   +R     T  H  +       CR   LE  ++L+  
Sbjct: 52  DIYVFSGLITAYLESGFLRDAIECYR----LTREHKLWVPF--DTCRKV-LEHLMKLKYF 104

Query: 329 MAAKGVYPGVVT---------YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTL 379
               G Y  ++          +N ++ + CK+G IR A  + + + +  + P  V+ NTL
Sbjct: 105 KLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTL 164

Query: 380 INAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGF 439
           +N Y ++GD     ++K+ ML +G+  D +TY  LI+G CK  +MD A  L   ML  G 
Sbjct: 165 MNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGL 224

Query: 440 SPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQR 499
            P+  +++ L+DG+C     +  +++  + +S+ L  D+  Y  LI   CKK  +  A  
Sbjct: 225 VPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHD 284

Query: 500 LFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
           L + M   G+  D   YT+L     + G+
Sbjct: 285 LIDEMSMKGLKPDKFTYTTLIDGCCKEGD 313



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/139 (28%), Positives = 69/139 (49%), Gaps = 3/139 (2%)

Query: 141 ANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANI 200
            +LK   D   + D+M +  L P     T L++   K+   D  ++  K+M+Q  +  + 
Sbjct: 277 GDLKQAHD---LIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDD 333

Query: 201 HLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDR 260
             Y  LI   C+       EK+L EM    ++ D  TY  ++  +CKKG  ++   +   
Sbjct: 334 VAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIVNEFCKKGDVWKGSKLLKE 393

Query: 261 MEREGISPDIVTYNSLIHG 279
           M+R+G +P +VTYN L++G
Sbjct: 394 MQRDGHAPSVVTYNVLMNG 412


>gi|255660806|gb|ACU25572.1| pentatricopeptide repeat-containing protein [Glandularia flava]
          Length = 418

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 119/409 (29%), Positives = 219/409 (53%), Gaps = 3/409 (0%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS-VLNALVKIHDDPDGNSH 131
            ++H+LQS+ TMIH L  ++    A+ +++ +  R    + S V   J++       + +
Sbjct: 8   TFRHTLQSYCTMIHFLCTHQMIPEAKTLIQIVVSRKGKGSASAVFAXJLETKGTQISDIY 67

Query: 132 VLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKM 191
           V S L+I Y      +D ++ +   + H        C  +L  L K +   +VW  Y++ 
Sbjct: 68  VFSGLIIAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEES 127

Query: 192 VQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMH 251
           ++ G  A+++ +N+L+H+  K  ++   + +   +    +R  + ++NTL+  Y K G  
Sbjct: 128 LECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDL 187

Query: 252 YEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTL 309
            E   +++ M+  G+ PD+ TY+ LI+G C+E +M +A  LF ++   G  PN VT+TTL
Sbjct: 188 DEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFEEMLDNGLVPNGVTFTTL 247

Query: 310 IDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI 369
           IDG+C+   +  A+ + + M ++ + P ++TYN+++  LCK+G ++ A  L++EM+ K +
Sbjct: 248 IDGHCKNGRVXLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGL 307

Query: 370 APDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKE 429
            PD +T  TLI+  CK GD  +A   + RM++  + LD   Y ALI G C+      A++
Sbjct: 308 KPDKITYTTLIDGSCKEGDLETAXXYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEK 367

Query: 430 LLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDV 478
           +L  ML  G  P   +Y+ +++ +C K +     KLL E    G    V
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSV 416



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 90/279 (32%), Positives = 146/279 (52%), Gaps = 2/279 (0%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           G    +  +N L+H F +EG +R A+ +F  I   G  P+ V++ TL++GY +  DL+E 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEG 190

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            RL+  M A GV P V TY+ ++  LCKE ++ DAN L  EM +  + P+ VT  TLI+ 
Sbjct: 191 FRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFEEMLDNGLVPNGVTFTTLIDG 250

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +CK G    AM++  +ML   L  D  TY  LI+G CK  ++  A++L+  M   G  P 
Sbjct: 251 HCKNGRVXLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPD 310

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ L+DG C + + E         +   + +D   Y ALI   C++ +   A+++  
Sbjct: 311 KITYTTLIDGSCKEGDLETAXXYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLR 370

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
            M   G+  +   YT +   + + G+    S +L +M R
Sbjct: 371 EMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQR 409



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 86/318 (27%), Positives = 151/318 (47%), Gaps = 31/318 (9%)

Query: 66  WAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKI---ALR-DFLSTPSVLNALVK 121
           + ES    Y  SL     ++H   K    + AQ++ + I    LR   +S  +++N  +K
Sbjct: 124 YEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIK 183

Query: 122 IHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLT 181
           + D                       +G ++ + M+   + P ++  +VL+N L K+   
Sbjct: 184 LGD---------------------LDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKM 222

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
           +   +++++M+  G+V N   +  LI   CK+  V    ++  +M  + +  DL TYNTL
Sbjct: 223 EDANELFEEMLDNGLVPNGVTFTTLIDGHCKNGRVXLAMEIYKQMLSQSLSPDLITYNTL 282

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA----RRLFRDIK 297
           I   CKKG   +A  + D M  +G+ PD +TY +LI G C+EG +  A    +R+ ++  
Sbjct: 283 IYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAXXYRKRMIKE-- 340

Query: 298 GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDA 357
               + V YT LI G C+     +A ++   M + G+ P + TY  I+ + CK+G +   
Sbjct: 341 NIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTG 400

Query: 358 NRLLNEMNEKKIAPDNVT 375
           ++LL EM      P  VT
Sbjct: 401 SKLLKEMQRDGYVPSVVT 418



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 90/320 (28%), Positives = 149/320 (46%), Gaps = 29/320 (9%)

Query: 240 TLIALYC-KKGMHYEALAVQDRMEREGIS-PDIVTYNSLIHGFCREGRMREARRLFRDIK 297
           TLI +   +KG    +      +E +G    DI  ++ LI  +   G +R+A   +R   
Sbjct: 34  TLIQIVVSRKGKGSASAVFAXJLETKGTQISDIYVFSGLIIAYLESGFLRDAIECYR--- 90

Query: 298 GATPNH---VTYTTLIDGYCRANDLEEALRLREVMAAKGVY---------PGVVTYNSIL 345
             T  H   V + T     CR   LE  ++L+      G Y           +  +N ++
Sbjct: 91  -LTKEHKFRVPFDT-----CR-KVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILM 143

Query: 346 RKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLM 405
               KEG IR A  + + + +  + P  V+ NTL+N Y K+GD     ++KN M  +G+ 
Sbjct: 144 HSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQ 203

Query: 406 LDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKL 465
            D +TY  LI+G CK  +M+ A EL   MLD G  P+  +++ L+DG+C        +++
Sbjct: 204 PDVYTYSVLINGLCKESKMEDANELFEEMLDNGLVPNGVTFTTLIDGHCKNGRVXLAMEI 263

Query: 466 LDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWR 525
             + +S+ L  D+  Y  LI   CKK  +  AQ L + M   G+  D + YT+L     +
Sbjct: 264 YKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCK 323

Query: 526 AGEPKACSDILDDMYRRRLM 545
            G+ +         YR+R++
Sbjct: 324 EGDLETAX-----XYRKRMI 338


>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
 gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
          Length = 698

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 125/357 (35%), Positives = 192/357 (53%), Gaps = 2/357 (0%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           ++ L V   MR     P+      L+ +  +    D   ++   M + G+  N+  +N +
Sbjct: 174 KEALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSV 233

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           ++  CK+  ++   K+  EM  + +  D  +YNTL+  YCK G  +EAL+V   M R+GI
Sbjct: 234 VNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGI 293

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALR 324
            PD+VT+ SLIH  C+ G +  A  L R+++  G   N +T+T LIDG+C+   L++AL 
Sbjct: 294 MPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALL 353

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
               M    + P VV YN+++   C  GR+ +A  L+ EM  K + PD VT +T+++AYC
Sbjct: 354 AVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYC 413

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           K GDT SA ++  +MLE G++ D  TY +LI   C+ K +  A  L   M+  G  P   
Sbjct: 414 KNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEV 473

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
           +Y+ L+DG+C + N E  L L DE V  G+  DV  Y  LI    K  +   AQRL 
Sbjct: 474 TYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLL 530



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 113/368 (30%), Positives = 192/368 (52%), Gaps = 2/368 (0%)

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
           + +  M+  GV  N++ YN+L+ A C      +   +L +M       +  TYNTL+A +
Sbjct: 143 RFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYNTLVAAF 202

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNH 303
           C+ G    A  + D M   G+ P++VT+NS+++G C+ GRM +AR++F ++  +G  P+ 
Sbjct: 203 CRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDG 262

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
           V+Y TL+ GYC+     EAL +   M  KG+ P VVT+ S++  +CK G +  A  L+ E
Sbjct: 263 VSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVRE 322

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
           M E+ +  + +T   LI+ +CK G    A+     M +  +      Y ALI+G+C    
Sbjct: 323 MRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGR 382

Query: 424 MDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRA 483
           MD A+EL+  M   G  P   +YS ++  YC   +  +  +L  + +  G+  D   Y +
Sbjct: 383 MDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSS 442

Query: 484 LIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRR 543
           LIR  C+++++  A  LF  M   G+  D V YTSL   + + G  +    + D+M +  
Sbjct: 443 LIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAG 502

Query: 544 LMITLKIY 551
           ++  +  Y
Sbjct: 503 VLPDVVTY 510



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 126/400 (31%), Positives = 202/400 (50%), Gaps = 21/400 (5%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           +D  +VFD+M    L P   +   L+    K   +     V+ +M + G++ ++  +  L
Sbjct: 244 EDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSL 303

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           IH  CK+ ++++   L+ EM  + ++ +  T+  LI  +CKKG   +AL     M +  I
Sbjct: 304 IHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRI 363

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
            P +V YN+LI+G+C  GRM EAR L R++  KG  P+ VTY+T++  YC+  D   A +
Sbjct: 364 QPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQ 423

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           L + M   GV P  +TY+S++R LC+E R+ DA+ L   M    + PD VT  +LI+ +C
Sbjct: 424 LNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHC 483

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           K G+   A+ + + M++AG++ D  TY  LI+G  K+     A+ LLF +      P+  
Sbjct: 484 KEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANI 543

Query: 445 SYSWLVDGYCNKNNE-EALLKLLDEFVSRGLC----------------VDVSVYRALIRR 487
            Y  L+   C +N E +++L LL  F  +GL                 +D SVY  LI  
Sbjct: 544 KYDALM--RCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHG 601

Query: 488 FCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
            C++  V  A      M   G   +S    SL    +  G
Sbjct: 602 HCREGNVMKALSFHKQMLQCGFAPNSTSTISLIRGLFEKG 641



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 102/328 (31%), Positives = 177/328 (53%), Gaps = 4/328 (1%)

Query: 259 DRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGAT--PNHVTYTTLIDGYCRA 316
           D M  +G++P++ TYN L+   C  G  +EA  + RD++GA   PN VTY TL+  +CRA
Sbjct: 146 DSMLSDGVAPNVYTYNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYNTLVAAFCRA 205

Query: 317 NDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTC 376
            +++ A RL ++M   G+ P +VT+NS++  +CK GR+ DA ++ +EM ++ +APD V+ 
Sbjct: 206 GEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSY 265

Query: 377 NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD 436
           NTL+  YCK+G +  A+ V   M   G+M D  T+ +LIH  CKA  ++ A  L+  M +
Sbjct: 266 NTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRE 325

Query: 437 AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDY 496
            G   +  +++ L+DG+C K   +  L  + E     +   V  Y ALI  +C   ++D 
Sbjct: 326 RGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDE 385

Query: 497 AQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSA 556
           A+ L   M+  G+  D V Y+++  AY + G+  +   +   M    ++     Y S   
Sbjct: 386 ARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIR 445

Query: 557 SYAKDNEILD--LFWSHVVDRGLMSKHI 582
              ++  + D  + + +++  GL    +
Sbjct: 446 VLCEEKRLGDAHVLFKNMISLGLQPDEV 473



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 128/450 (28%), Positives = 214/450 (47%), Gaps = 58/450 (12%)

Query: 115 VLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNS 174
           V + +VK    PDG S+  + LV  Y  +  + + L VF +M    +MP +   T L++ 
Sbjct: 249 VFDEMVKEGLAPDGVSY--NTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHV 306

Query: 175 LAK----DRLTDMVWKVYKKMVQLG-------------------------------VVAN 199
           + K    +R   +V ++ ++ +Q+                                +  +
Sbjct: 307 MCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPS 366

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
           +  YN LI+  C    +D+  +L+ EME K V+ D+ TY+T+++ YCK G  + A  +  
Sbjct: 367 VVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQ 426

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRAN 317
           +M   G+ PD +TY+SLI   C E R+ +A  LF+++   G  P+ VTYT+LIDG+C+  
Sbjct: 427 QMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEG 486

Query: 318 DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCN 377
           ++E AL L + M   GV P VVTY+ ++  L K  R ++A RLL ++  ++  P N+  +
Sbjct: 487 NVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYD 546

Query: 378 TL---------------INAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAK 422
            L               +  +C  G    A KV   +L+    LD   Y  LIHG C  +
Sbjct: 547 ALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHC--R 604

Query: 423 EMDIAKELLF--GMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSV 480
           E ++ K L F   ML  GF+P+  S   L+ G   K       +++ + ++     D   
Sbjct: 605 EGNVMKALSFHKQMLQCGFAPNSTSTISLIRGLFEKGMVVEADQVIQQLLNCCSLADAEA 664

Query: 481 YRALIRRFCKKEKVDYAQRLFNLMQGNGIL 510
            +ALI    K+  VD    + + M  +G+L
Sbjct: 665 SKALIDLNLKEGNVDAVLDVLHGMARDGLL 694



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 118/230 (51%), Gaps = 1/230 (0%)

Query: 298 GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDA 357
           G  P+ + Y  ++     A+ L  A R  + M + GV P V TYN ++R LC  G  ++A
Sbjct: 118 GYAPSVLAYNAVLLALSDAS-LPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 176

Query: 358 NRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHG 417
             +L +M      P+ VT NTL+ A+C+ G+   A ++ + M E GL  +  T+ ++++G
Sbjct: 177 LSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNG 236

Query: 418 FCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVD 477
            CKA  M+ A+++   M+  G +P   SY+ LV GYC        L +  E   +G+  D
Sbjct: 237 ICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPD 296

Query: 478 VSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
           V  + +LI   CK   ++ A  L   M+  G+  + + +T+L   + + G
Sbjct: 297 VVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKG 346



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 106/228 (46%), Gaps = 1/228 (0%)

Query: 333 GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
           G  P V+ YN++L  L  +  +  A R  + M    +AP+  T N L+ A C  G    A
Sbjct: 118 GYAPSVLAYNAVLLAL-SDASLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 176

Query: 393 MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
           + V   M  AG   +  TY  L+  FC+A E+D A+ L+  M + G  P+  +++ +V+G
Sbjct: 177 LSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNG 236

Query: 453 YCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGD 512
            C     E   K+ DE V  GL  D   Y  L+  +CK      A  +F  M   GI+ D
Sbjct: 237 ICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPD 296

Query: 513 SVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAK 560
            V +TSL +   +AG  +    ++ +M  R L +    + +    + K
Sbjct: 297 VVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCK 344



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 81/325 (24%), Positives = 150/325 (46%), Gaps = 19/325 (5%)

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           L+  Y  +    +  ++  +M    + P +   + +L++  K+  T   +++ ++M++ G
Sbjct: 373 LINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENG 432

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
           V+ +   Y+ LI   C+   +     L   M    ++ D  TY +LI  +CK+G    AL
Sbjct: 433 VLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERAL 492

Query: 256 AVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGY 313
           ++ D M + G+ PD+VTY+ LI+G  +  R +EA+RL   +  +   P ++ Y  L+   
Sbjct: 493 SLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMR-C 551

Query: 314 CRANDLEEALRLREVMAAKG-------VYPGVV---------TYNSILRKLCKEGRIRDA 357
           CR  +L+  L L +    KG       VY  ++          Y+ ++   C+EG +  A
Sbjct: 552 CRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKA 611

Query: 358 NRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHG 417
                +M +   AP++ +  +LI    + G    A +V  ++L    + D    KALI  
Sbjct: 612 LSFHKQMLQCGFAPNSTSTISLIRGLFEKGMVVEADQVIQQLLNCCSLADAEASKALIDL 671

Query: 418 FCKAKEMDIAKELLFGMLDAGFSPS 442
             K   +D   ++L GM   G  PS
Sbjct: 672 NLKEGNVDAVLDVLHGMARDGLLPS 696



 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 78/173 (45%), Gaps = 5/173 (2%)

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
             Y A++     A  +  A+     ML  G +P+  +Y+ LV   C + + +  L +L +
Sbjct: 124 LAYNAVLLALSDAS-LPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSVLRD 182

Query: 469 FVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
               G   +   Y  L+  FC+  +VD A+RL ++M+  G+  + V + S+     +AG 
Sbjct: 183 MRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGR 242

Query: 529 PKACSDILDDMYRRRLMITLKIYRSFSASYAK---DNEILDLFWSHVVDRGLM 578
            +    + D+M +  L      Y +    Y K    +E L +F + +  +G+M
Sbjct: 243 MEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVF-AEMTRKGIM 294


>gi|410109909|gb|AFV61034.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           viburnoides]
          Length = 431

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 125/428 (29%), Positives = 223/428 (52%), Gaps = 4/428 (0%)

Query: 62  AFFKW-AESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS-VLNAL 119
           +FF W +  A   ++H+L S+ TMIH L  ++    A+++++ +  R    + S V  A+
Sbjct: 2   SFFTWLSXPANSTFRHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAI 61

Query: 120 VKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDR 179
            +       + +V S L+  Y      +D ++ +     H        C  +L  L K +
Sbjct: 62  XETXGTQRSDJYVFSGLITAYLESGFLRDAIECYRLTXEHKFWVPFDTCRKVLEHLMKLK 121

Query: 180 LTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYN 239
              +VW  Y+++++ G  A+++ +N+L+H  CK  D+   + +   +    +R  + +YN
Sbjct: 122 YFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYN 181

Query: 240 TLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IK 297
           TL+  Y + G   E   ++  M   G+ PD+ TY+ LI+G C+E +  +A  LF +  +K
Sbjct: 182 TLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVK 241

Query: 298 GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDA 357
           G  PN V +TTLIDG+C+   ++ A+ + + M ++ + P ++TYN+++  LCK+G ++ A
Sbjct: 242 GLVPNXVXFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQA 301

Query: 358 NRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHG 417
           + L++EM+ K + PD +T  TLI+  CK GD   A +   RM++    LD   Y ALI G
Sbjct: 302 HHLIDEMSXKGLKPDKITYTTLIDGCCKEGDLDXAFEHXKRMIQENXRLDXVXYTALISG 361

Query: 418 FCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVD 477
            C       A+++L  ML  G  P   +Y+ +++ +C K +     KLL E    G    
Sbjct: 362 LCXEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPS 421

Query: 478 VSVYRALI 485
           V  Y  L+
Sbjct: 422 VVTYNVLM 429



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 91/279 (32%), Positives = 143/279 (51%), Gaps = 2/279 (0%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           G    +  +N L+H FC++G +R A+ +F  I   G  P+ V+Y TL++GY R  DL+E 
Sbjct: 137 GYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEG 196

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            RL+  M A GV P V TY+ ++   CKE +  DAN L +EM  K + P+ V   TLI+ 
Sbjct: 197 FRLKSAMLASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVXFTTLIDG 256

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +CK G    AM++  +ML   L  D  TY  LI+G CK  ++  A  L+  M   G  P 
Sbjct: 257 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSXKGLKPD 316

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ L+DG C + + +   +     +     +D   Y ALI   C + +   A+++  
Sbjct: 317 KITYTTLIDGCCKEGDLDXAFEHXKRMIQENXRLDXVXYTALISGLCXEGRSVDAEKMLR 376

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
            M   G+  D+  YT +   + + G+    S +L +M R
Sbjct: 377 EMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQR 415



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 72/320 (22%), Positives = 130/320 (40%), Gaps = 21/320 (6%)

Query: 272 TYNSLIHGFCREGRMREARRLF-----RDIKGATP---------------NHVTYTTLID 311
           +Y ++IH  C    + EA+ L      R  KG+                 +   ++ LI 
Sbjct: 21  SYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAIXETXGTQRSDJYVFSGLIT 80

Query: 312 GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAP 371
            Y  +  L +A+    +      +    T   +L  L K    +       E+ E     
Sbjct: 81  AYLESGFLRDAIECYRLTXEHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPA 140

Query: 372 DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
                N L++ +CK GD   A  V + + + GL     +Y  L++G+ +  ++D    L 
Sbjct: 141 SLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLK 200

Query: 432 FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
             ML +G  P   +YS L++G C ++  +   +L DE + +GL  +   +  LI   CK 
Sbjct: 201 SAMLASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVXFTTLIDGHCKN 260

Query: 492 EKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIY 551
            +VD A  ++  M    +  D + Y +L Y   + G+ K    ++D+M  + L      Y
Sbjct: 261 GRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSXKGLKPDKITY 320

Query: 552 RSFSASYAKDNEILDLFWSH 571
            +      K+ + LD  + H
Sbjct: 321 TTLIDGCCKEGD-LDXAFEH 339



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 61/129 (47%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
            + D+M    L P     T L++   K+   D  ++  K+M+Q     +   Y  LI   
Sbjct: 303 HLIDEMSXKGLKPDKITYTTLIDGCCKEGDLDXAFEHXKRMIQENXRLDXVXYTALISGL 362

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           C        EK+L EM    ++ D  TY  +I  +CKKG  ++   +   M+R+G  P +
Sbjct: 363 CXEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSV 422

Query: 271 VTYNSLIHG 279
           VTYN L++G
Sbjct: 423 VTYNVLMNG 431


>gi|255660852|gb|ACU25595.1| pentatricopeptide repeat-containing protein [Stachytarpheta
           cayennensis]
          Length = 418

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 119/402 (29%), Positives = 220/402 (54%), Gaps = 3/402 (0%)

Query: 75  KHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS-VLNALVKIHDDPDGNSHVL 133
           +H+L S+ TMIH+L  ++    A+++++ +  R    + S V  A+++       + +V 
Sbjct: 10  RHTLHSYCTMIHLLCTHQMLIEAKSLIQVVVSRKGKDSASDVFEAILETKGTQRSDFYVF 69

Query: 134 SWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQ 193
           S L+I Y      +D +Q F   + H +      C  +L  L + R   +VW  YK++++
Sbjct: 70  SGLMIAYLESGFVRDAVQCFRLTKQHKIRVPFDTCRKVLEHLMEFRYFKLVWDFYKEVLE 129

Query: 194 LGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYE 253
            G  A+++ +N+L+   CK  ++   + +   +    +R  + ++NTLI  Y K G   E
Sbjct: 130 CGYPASLYFFNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYIKLGDLDE 189

Query: 254 ALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLID 311
              ++  M   G  PD+ TY+ LI+G C+EG++ EA  LF ++   G  PN VT+TTLI 
Sbjct: 190 GFRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIH 249

Query: 312 GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAP 371
           G+C+   ++ A+ + + M ++G+ P ++TYN+++  LCK+G ++  + L++EM    + P
Sbjct: 250 GHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKP 309

Query: 372 DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
           D ++  TLI+  CK GD   A++++N+M++  + LD   Y ALI   C+      A+++L
Sbjct: 310 DKISYTTLIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLCREGRASDAEKML 369

Query: 432 FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
             ML  G  P   +Y+ +++ +C K + +   KLL E    G
Sbjct: 370 REMLSVGLKPDNGTYTMIINEFCKKRDSKTASKLLREMQRDG 411



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 96/279 (34%), Positives = 152/279 (54%), Gaps = 2/279 (0%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           G    +  +N L+  FC+EG MR A+ +F  I   G  P+ V++ TLI+GY +  DL+E 
Sbjct: 131 GYPASLYFFNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYIKLGDLDEG 190

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            RL+  M A G  P V TY+ ++  LCKEG++ +AN L NEM +  + P+ VT  TLI+ 
Sbjct: 191 FRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHG 250

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +CK      AM++  +ML  GL  D  TY  LI+G CK  E+    +L+  M+  G  P 
Sbjct: 251 HCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPD 310

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             SY+ L+DG C + + E  L+L ++ +   + +D   Y ALI   C++ +   A+++  
Sbjct: 311 KISYTTLIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLCREGRASDAEKMLR 370

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
            M   G+  D+  YT +   + +  + K  S +L +M R
Sbjct: 371 EMLSVGLKPDNGTYTMIINEFCKKRDSKTASKLLREMQR 409



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 94/345 (27%), Positives = 160/345 (46%), Gaps = 44/345 (12%)

Query: 232 RADLFTYNTLIALYCKKGMHYEALA-VQDRMEREGISP-----------------DIVTY 273
           R  L +Y T+I L C   M  EA + +Q  + R+G                    D   +
Sbjct: 10  RHTLHSYCTMIHLLCTHQMLIEAKSLIQVVVSRKGKDSASDVFEAILETKGTQRSDFYVF 69

Query: 274 NSLIHGFCREGRMREARRLFRDIKGATPNH---VTYTTLIDGYCRANDLEEALRLR---- 326
           + L+  +   G +R+A + FR     T  H   V + T     CR   LE  +  R    
Sbjct: 70  SGLMIAYLESGFVRDAVQCFR----LTKQHKIRVPFDT-----CRKV-LEHLMEFRYFKL 119

Query: 327 ------EVMAAKGVYPG-VVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTL 379
                 EV+     YP  +  +N ++++ CKEG +R A  + + + +  + P  V+ NTL
Sbjct: 120 VWDFYKEVLECG--YPASLYFFNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTL 177

Query: 380 INAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGF 439
           IN Y K+GD     ++K+ M  +G   D +TY  LI+G CK  ++D A EL   MLD G 
Sbjct: 178 INGYIKLGDLDEGFRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGL 237

Query: 440 SPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQR 499
            P+  +++ L+ G+C     +  +++  + +S+GL  D+  Y  LI   CKK ++     
Sbjct: 238 VPNGVTFTTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHD 297

Query: 500 LFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL 544
           L + M  NG+  D + YT+L     + G+ +   ++ + M +  +
Sbjct: 298 LIDEMIMNGLKPDKISYTTLIDGSCKEGDLEIALELRNKMIQESI 342



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 74/261 (28%), Positives = 122/261 (46%), Gaps = 37/261 (14%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           VFD +    L P + +   L+N   K    D  +++   M   G   +++ Y++LI+  C
Sbjct: 158 VFDAITKWGLRPSVVSFNTLINGYIKLGDLDEGFRLKSAMHASGAQPDVYTYSILINGLC 217

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           K   +D+  +L  EM    +  +  T+ TLI  +CK      A+ +  +M  +G+SPD++
Sbjct: 218 KEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLI 277

Query: 272 TYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           TYN+LI+G C++G +++   L  ++   G  P+ ++YTTLIDG C+  DLE AL LR  M
Sbjct: 278 TYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLIDGSCKEGDLEIALELRNKM 337

Query: 330 AAK-----------------------------------GVYPGVVTYNSILRKLCKEGRI 354
             +                                   G+ P   TY  I+ + CK+   
Sbjct: 338 IQESIRLDDVAYTALISCLCREGRASDAEKMLREMLSVGLKPDNGTYTMIINEFCKKRDS 397

Query: 355 RDANRLLNEMNEKKIAPDNVT 375
           + A++LL EM      P  VT
Sbjct: 398 KTASKLLREMQRDGPLPGVVT 418



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 91/192 (47%), Gaps = 37/192 (19%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           ++F++M  + L+P+    T L++   K+   D+  ++YK+M+  G+  ++  YN LI+  
Sbjct: 227 ELFNEMLDNGLVPNGVTFTTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGL 286

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMERE------ 264
           CK  ++ +V  L+ EM    ++ D  +Y TLI   CK+G    AL ++++M +E      
Sbjct: 287 CKKGELKQVHDLIDEMIMNGLKPDKISYTTLIDGSCKEGDLEIALELRNKMIQESIRLDD 346

Query: 265 -----------------------------GISPDIVTYNSLIHGFCREGRMREARRLFRD 295
                                        G+ PD  TY  +I+ FC++   + A +L R+
Sbjct: 347 VAYTALISCLCREGRASDAEKMLREMLSVGLKPDNGTYTMIINEFCKKRDSKTASKLLRE 406

Query: 296 IK--GATPNHVT 305
           ++  G  P  VT
Sbjct: 407 MQRDGPLPGVVT 418


>gi|255660784|gb|ACU25561.1| pentatricopeptide repeat-containing protein [Verbena officinalis]
          Length = 418

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 119/404 (29%), Positives = 219/404 (54%), Gaps = 3/404 (0%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFL-STPSVLNALVKIHDDPDGNSH 131
            ++H+LQS+ TMIH L  ++    A+ +++ +  R    S  SV  A+++       + +
Sbjct: 8   TFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASSVFAAILETKGTQRSDIY 67

Query: 132 VLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKM 191
           V S L+  Y      +D ++ +   + H        C  +L  L K +   +VW  Y++ 
Sbjct: 68  VFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEES 127

Query: 192 VQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMH 251
           ++ G  A+++ +N+L+H+  K  ++   + +   +    +R  + ++NTL+  Y K G  
Sbjct: 128 LECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDL 187

Query: 252 YEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTL 309
            E   +++ M+  G+ PD+ TY+ LI+G C+E +M +A  LF ++      PN VT+TTL
Sbjct: 188 DEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNXLVPNGVTFTTL 247

Query: 310 IDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI 369
           IDG+C+   ++ A+ + + M ++ + P ++TYN+++  LCK+G ++ A  L++EM+ K +
Sbjct: 248 IDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGL 307

Query: 370 APDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKE 429
            PD +T  TLI+  CK GD  +A K + RM++  + LD   Y ALI G C+      A++
Sbjct: 308 KPDKITYTTLIDGNCKEGDLETAFKYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEK 367

Query: 430 LLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
           +L  ML  G  P   +Y+ +++ +C K +     KLL E    G
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 91/283 (32%), Positives = 148/283 (52%), Gaps = 2/283 (0%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           G    +  +N L+H F +EG +R A+ +F  I      P+ V++ TL++GY +  DL+E 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEG 190

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            RL+  M A GV P V TY+ ++  LCKE ++ DAN L +EM +  + P+ VT  TLI+ 
Sbjct: 191 FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNXLVPNGVTFTTLIDG 250

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +CK G    AM++  +ML   L  D  TY  LI+G CK  ++  A++L+  M   G  P 
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPD 310

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ L+DG C + + E   K     +   + +D   Y ALI   C++ +   A+++  
Sbjct: 311 KITYTTLIDGNCKEGDLETAFKYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLR 370

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
            M   G+  +   YT +   + + G+    S +L +M R   M
Sbjct: 371 EMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYM 413



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 89/317 (28%), Positives = 151/317 (47%), Gaps = 29/317 (9%)

Query: 66  WAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKI---ALRDFLSTPSVLNALVKI 122
           + ES    Y  SL     ++H   K    + AQ++ + I   +LR     PSV++     
Sbjct: 124 YEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLR-----PSVVS----- 173

Query: 123 HDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTD 182
                      + L+  Y  L    +G ++ + M+   + P ++  +VL+N L K+   D
Sbjct: 174 ----------FNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMD 223

Query: 183 MVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLI 242
              +++ +M+   +V N   +  LI   CK+  VD   ++  +M  + +  DL TYNTLI
Sbjct: 224 DANELFDEMLDNXLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLI 283

Query: 243 ALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA----RRLFRDIKG 298
              CKKG   +A  + D M  +G+ PD +TY +LI G C+EG +  A    +R+ ++   
Sbjct: 284 YGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFKYRKRMIKE--N 341

Query: 299 ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDAN 358
              + V YT LI G C+     +A ++   M + G+ P + TY  I+ + CK+G +   +
Sbjct: 342 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGS 401

Query: 359 RLLNEMNEKKIAPDNVT 375
           +LL EM      P  VT
Sbjct: 402 KLLKEMQRDGYMPSVVT 418



 Score =  125 bits (313), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 95/344 (27%), Positives = 154/344 (44%), Gaps = 45/344 (13%)

Query: 232 RADLFTYNTLIALYCKKGMHYEALA-VQDRMEREGISP-----------------DIVTY 273
           R  L +Y T+I   C   M  EA   +Q  + R+G                    DI  +
Sbjct: 10  RHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASSVFAAILETKGTQRSDIYVF 69

Query: 274 NSLIHGFCREGRMREARRLFRDIKGATPNH---VTYTTLIDGYCRANDLEEALRLREVMA 330
           + LI  +   G +R+A   +R     T  H   V + T     CR   LE  ++L+    
Sbjct: 70  SGLITAYLESGFLRDAIECYR----LTKEHKFRVPFDT-----CRKV-LEHLMKLKYFKL 119

Query: 331 AKGVY---------PGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
             G Y           +  +N ++    KEG IR A  + + + +  + P  V+ NTL+N
Sbjct: 120 VWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMN 179

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
            Y K+GD     ++KN M  +G+  D +TY  LI+G CK  +MD A EL   MLD    P
Sbjct: 180 GYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNXLVP 239

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
           +  +++ L+DG+C     +  +++  + +S+ L  D+  Y  LI   CKK  +  AQ L 
Sbjct: 240 NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLI 299

Query: 502 NLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
           + M   G+  D + YT+L     + G+ +         YR+R++
Sbjct: 300 DEMSMKGLKPDKITYTTLIDGNCKEGDLETAFK-----YRKRMI 338


>gi|255660798|gb|ACU25568.1| pentatricopeptide repeat-containing protein [Verbena intermedia]
          Length = 418

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 119/404 (29%), Positives = 220/404 (54%), Gaps = 3/404 (0%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS-VLNALVKIHDDPDGNSH 131
            ++H+LQS+ TMIH L  ++    A+ +++ +  R    + S V  A+++       + +
Sbjct: 8   TFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIY 67

Query: 132 VLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKM 191
           V S L+  Y      +D ++ +   + H        C  +L  L K +   +VW  Y++ 
Sbjct: 68  VFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEEN 127

Query: 192 VQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMH 251
           ++ G  A+++ +N+L+H+  K  ++   + +   +    +R  + ++NTL+  Y K G  
Sbjct: 128 LECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDL 187

Query: 252 YEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTL 309
            E   +++ M+  G+ PD+ TY+ LI+G C+E +M +A  LF ++  KG  PN VT+TTL
Sbjct: 188 NEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTL 247

Query: 310 IDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI 369
           IDG+C+   ++ A+ + + M ++ + P ++TYN+++  LCK+G ++ A  L++EM  K +
Sbjct: 248 IDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGL 307

Query: 370 APDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKE 429
            PD +T  TLI+  CK GD  +A + + RM++  + LD   Y ALI G C+      A++
Sbjct: 308 KPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEK 367

Query: 430 LLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
           +L  ML  G  P   +Y+ +++ +C K +     KLL E    G
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 92/283 (32%), Positives = 150/283 (53%), Gaps = 2/283 (0%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           G    +  +N L+H F +EG +R A+ +F  I   G  P+ V++ TL++GY +  DL E 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEG 190

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            RL+  M A GV P V TY+ ++  LCKE ++ DAN L +EM +K + P+ VT  TLI+ 
Sbjct: 191 FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDG 250

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +CK G    AM++  +ML   L  D  TY  LI+G CK  ++  A++L+  M+  G  P 
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPD 310

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ L+DG C + + E   +     +   + +D   Y ALI   C++ +   A+++  
Sbjct: 311 KITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLR 370

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
            M   G+  +   YT +   + + G+    S +L +M R   M
Sbjct: 371 EMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYM 413



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 87/318 (27%), Positives = 150/318 (47%), Gaps = 31/318 (9%)

Query: 66  WAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKI---ALR-DFLSTPSVLNALVK 121
           + E+    Y  SL     ++H   K    + AQ++ + I    LR   +S  +++N  +K
Sbjct: 124 YEENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIK 183

Query: 122 IHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLT 181
           + D                       +G ++ + M+   + P ++  +VL+N L K+   
Sbjct: 184 LGD---------------------LNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKM 222

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
           D    ++ +M+  G+V N   +  LI   CK+  VD   ++  +M  + +  DL TYNTL
Sbjct: 223 DDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTL 282

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA----RRLFRDIK 297
           I   CKKG   +A  + D M  +G+ PD +TY +LI G C+EG +  A    +R+ ++  
Sbjct: 283 IYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKE-- 340

Query: 298 GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDA 357
               + V YT LI G C+     +A ++   M + G+ P + TY  I+ + CK+G +   
Sbjct: 341 NIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTG 400

Query: 358 NRLLNEMNEKKIAPDNVT 375
           ++LL EM      P  VT
Sbjct: 401 SKLLKEMQRDGYMPSVVT 418



 Score =  125 bits (313), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 95/344 (27%), Positives = 155/344 (45%), Gaps = 45/344 (13%)

Query: 232 RADLFTYNTLIALYCKKGMHYEALA-VQDRMEREGISP-----------------DIVTY 273
           R  L +Y T+I   C   M  EA   +Q  + R+G                    DI  +
Sbjct: 10  RHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVF 69

Query: 274 NSLIHGFCREGRMREARRLFRDIKGATPNH---VTYTTLIDGYCRANDLEEALRLREVMA 330
           + LI  +   G +R+A   +R     T  H   V + T     CR   LE  ++L+    
Sbjct: 70  SGLITAYLESGFLRDAIECYR----LTKEHKFRVPFDT-----CR-KVLEHLMKLKYFKL 119

Query: 331 AKGVY---------PGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
             G Y           +  +N ++    KEG IR A  + + + +  + P  V+ NTL+N
Sbjct: 120 VWGFYEENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMN 179

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
            Y K+GD     ++KN M  +G+  D +TY  LI+G CK  +MD A  L   MLD G  P
Sbjct: 180 GYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVP 239

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
           +  +++ L+DG+C     +  +++  + +S+ L  D+  Y  LI   CKK  +  AQ L 
Sbjct: 240 NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLI 299

Query: 502 NLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
           + M   G+  D + YT+L     + G+ +   +     YR+R++
Sbjct: 300 DEMIMKGLKPDKITYTTLIDGNCKEGDLETAFE-----YRKRMI 338


>gi|255660790|gb|ACU25564.1| pentatricopeptide repeat-containing protein [Verbena hispida]
          Length = 418

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 119/404 (29%), Positives = 219/404 (54%), Gaps = 3/404 (0%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS-VLNALVKIHDDPDGNSH 131
            ++H+LQS+ TMIH L  ++    A+ +++ +  R    + S V  A+++       + +
Sbjct: 8   TFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIY 67

Query: 132 VLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKM 191
           V S L+  Y      +D ++ +   + H        C  +L  L K +   +VW  Y++ 
Sbjct: 68  VFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEEN 127

Query: 192 VQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMH 251
           ++ G  A+++ +N+L+H   K  ++   + +   +    +R  + ++NTL+  Y K G  
Sbjct: 128 LECGYPASLYFFNILMHGFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDL 187

Query: 252 YEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTL 309
            E   +++ M+  G+ PD+ TY+ LI+G C+E +M +A  LF ++  KG  PN VT+TTL
Sbjct: 188 NEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTL 247

Query: 310 IDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI 369
           IDG+C+   ++ A+ + + M ++ + P ++TYN+++  LCK+G ++ A  L++EM  K +
Sbjct: 248 IDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGL 307

Query: 370 APDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKE 429
            PD +T  TLI+  CK GD  +A + + RM++  + LD   Y ALI G C+      A++
Sbjct: 308 KPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEK 367

Query: 430 LLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
           +L  ML  G  P   +Y+ +++ +C K +     KLL E    G
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 92/279 (32%), Positives = 150/279 (53%), Gaps = 2/279 (0%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           G    +  +N L+HGF +EG +R A+ +F  I   G  P+ V++ TL++GY +  DL E 
Sbjct: 131 GYPASLYFFNILMHGFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEG 190

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            RL+  M A GV P V TY+ ++  LCKE ++ DAN L +EM +K + P+ VT  TLI+ 
Sbjct: 191 FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDG 250

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +CK G    AM++  +ML   L  D  TY  LI+G CK  ++  A++L+  M+  G  P 
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPD 310

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ L+DG C + + E   +     +   + +D   Y ALI   C++ +   A+++  
Sbjct: 311 KITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLR 370

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
            M   G+  +   YT +   + + G+    S +L +M R
Sbjct: 371 EMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQR 409



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 87/318 (27%), Positives = 150/318 (47%), Gaps = 31/318 (9%)

Query: 66  WAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKI---ALR-DFLSTPSVLNALVK 121
           + E+    Y  SL     ++H   K    + AQ++ + I    LR   +S  +++N  +K
Sbjct: 124 YEENLECGYPASLYFFNILMHGFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIK 183

Query: 122 IHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLT 181
           + D                       +G ++ + M+   + P ++  +VL+N L K+   
Sbjct: 184 LGD---------------------LNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKM 222

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
           D    ++ +M+  G+V N   +  LI   CK+  VD   ++  +M  + +  DL TYNTL
Sbjct: 223 DDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTL 282

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA----RRLFRDIK 297
           I   CKKG   +A  + D M  +G+ PD +TY +LI G C+EG +  A    +R+ ++  
Sbjct: 283 IYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKE-- 340

Query: 298 GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDA 357
               + V YT LI G C+     +A ++   M + G+ P + TY  I+ + CK+G +   
Sbjct: 341 NIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTG 400

Query: 358 NRLLNEMNEKKIAPDNVT 375
           ++LL EM      P  VT
Sbjct: 401 SKLLKEMQRDGYKPSVVT 418



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/344 (27%), Positives = 155/344 (45%), Gaps = 45/344 (13%)

Query: 232 RADLFTYNTLIALYCKKGMHYEALA-VQDRMEREGISP-----------------DIVTY 273
           R  L +Y T+I   C   M  EA   +Q  + R+G                    DI  +
Sbjct: 10  RHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVF 69

Query: 274 NSLIHGFCREGRMREARRLFRDIKGATPNH---VTYTTLIDGYCRANDLEEALRLREVMA 330
           + LI  +   G +R+A   +R     T  H   V + T     CR   LE  ++L+    
Sbjct: 70  SGLITAYLESGFLRDAIECYR----LTKEHKFRVPFDT-----CRKV-LEHLMKLKYFKL 119

Query: 331 AKGVY---------PGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
             G Y           +  +N ++    KEG IR A  + + + +  + P  V+ NTL+N
Sbjct: 120 VWGFYEENLECGYPASLYFFNILMHGFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMN 179

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
            Y K+GD     ++KN M  +G+  D +TY  LI+G CK  +MD A  L   MLD G  P
Sbjct: 180 GYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVP 239

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
           +  +++ L+DG+C     +  +++  + +S+ L  D+  Y  LI   CKK  +  AQ L 
Sbjct: 240 NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLI 299

Query: 502 NLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
           + M   G+  D + YT+L     + G+ +   +     YR+R++
Sbjct: 300 DEMIMKGLKPDKITYTTLIDGNCKEGDLETAFE-----YRKRMI 338


>gi|307136214|gb|ADN34051.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
           melo]
          Length = 653

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 156/530 (29%), Positives = 272/530 (51%), Gaps = 12/530 (2%)

Query: 4   LVALNSDTKFIKTISAIMLKGHWAKLLNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAF 63
           L++ +++    K I   + +  W  L    ++ SLT++ + +V+    N    P L+  F
Sbjct: 24  LLSPSTEDIIYKAICVNLKQRRWKFL--EQVSPSLTNSLVCRVVREFRNS---PQLALEF 78

Query: 64  FKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIH 123
           + W E A  N+ HSL+S  T++H+L  +++F  A +++E + L++  S   VL  L+  +
Sbjct: 79  YNWVE-ARDNFSHSLESCCTLVHVLVNSRNFNDALSIMESLMLKNGKSPLEVLGGLMNSY 137

Query: 124 DDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDM 183
           +  + N  V   LV     LK  +    V  ++R+      +HA    LN L K   TD 
Sbjct: 138 EICNSNPAVFDALVRTCTQLKSVEGAYDVIRKLRLEGFWVTIHAWNNFLNLLLKLGETDK 197

Query: 184 VWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIA 243
            W +Y +MV  G   N++ +N++I+A CK   + +   ++  M   ++  ++ ++N +I 
Sbjct: 198 FWNMYMEMVASGYSENVNTFNLIIYALCKECKLLEAISVVYLMLKIEIWPNVVSFNMIID 257

Query: 244 LYCKKGMHYEALAVQDRME---REGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--G 298
              K G    AL +    E      +SP+IVTYN +I+GFC+  R+  A+ +  ++   G
Sbjct: 258 KASKMGEMDLALKLTRNTEVISGGSVSPNIVTYNCIINGFCKIRRLESAKNVLAEMIKLG 317

Query: 299 ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDAN 358
              N  TY  LIDGY R   L+ A RL + M    + P  V YNS++  L  EG + +A+
Sbjct: 318 IDSNERTYAPLIDGYARKGSLDVAFRLCDEMVETRLIPDTVVYNSLIYWLYIEGELEEAS 377

Query: 359 RLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGF 418
            LL++M  ++I PD  T + L    C  G    A++V   ++E  L+ D +T+  LI+  
Sbjct: 378 FLLSDMINRRILPDEFTYSILTKGLCLSGHLNKALRVHYYIVERNLVKDAYTHNILINYM 437

Query: 419 CKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDV 478
            +++ +  AK+LL  M+  G  P   +Y  LV G+C +   EA +++ D+ V      ++
Sbjct: 438 FQSRNIAGAKQLLSSMIVRGIKPDMVTYGTLVAGHCKEGKIEAAVQIYDKTVKADGKSNL 497

Query: 479 SVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
            VY +++   CK+  +D A+ L + +Q NG L DSV Y +L + +   GE
Sbjct: 498 VVYNSILDGLCKQGSIDAARLLVDKLQQNGFL-DSVTYNTLLHGFCVNGE 546



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 105/397 (26%), Positives = 181/397 (45%), Gaps = 39/397 (9%)

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYK--KMVQLGVVA-NIHLYNVLIHACCKSSDVDKV 219
           P++ +  ++++  +K    D+  K+ +  +++  G V+ NI  YN +I+  CK   ++  
Sbjct: 247 PNVVSFNMIIDKASKMGEMDLALKLTRNTEVISGGSVSPNIVTYNCIINGFCKIRRLESA 306

Query: 220 EKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHG 279
           + +L EM    + ++  TY  LI  Y +KG    A  + D M    + PD V YNSLI+ 
Sbjct: 307 KNVLAEMIKLGIDSNERTYAPLIDGYARKGSLDVAFRLCDEMVETRLIPDTVVYNSLIYW 366

Query: 280 FCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPG 337
              EG + EA  L  D+  +   P+  TY+ L  G C +  L +ALR+   +  + +   
Sbjct: 367 LYIEGELEEASFLLSDMINRRILPDEFTYSILTKGLCLSGHLNKALRVHYYIVERNLVKD 426

Query: 338 VVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKN 397
             T+N ++  + +   I  A +LL+ M  + I PD VT  TL+  +CK G   +A+++ +
Sbjct: 427 AYTHNILINYMFQSRNIAGAKQLLSSMIVRGIKPDMVTYGTLVAGHCKEGKIEAAVQIYD 486

Query: 398 RMLEA--------------GL--------------------MLDQFTYKALIHGFCKAKE 423
           + ++A              GL                     LD  TY  L+HGFC   E
Sbjct: 487 KTVKADGKSNLVVYNSILDGLCKQGSIDAARLLVDKLQQNGFLDSVTYNTLLHGFCVNGE 546

Query: 424 MDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRA 483
           ++ A  L   M++ G   +  SY+ +++  C     +  ++L+    S+G+  D+  Y  
Sbjct: 547 VEKAFALFLEMINVGSLVNIVSYNIMINFLCKMGLIQQAMELMRAMASQGIVPDLITYTT 606

Query: 484 LIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLA 520
           LI  F K    D    L + M   G + D   Y SL 
Sbjct: 607 LITNFVKSYGSDNVIELHDYMVLKGAVPDRQTYQSLV 643



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 71/256 (27%), Positives = 138/256 (53%), Gaps = 1/256 (0%)

Query: 161 LMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVE 220
           ++P     ++L   L      +   +V+  +V+  +V + + +N+LI+   +S ++   +
Sbjct: 388 ILPDEFTYSILTKGLCLSGHLNKALRVHYYIVERNLVKDAYTHNILINYMFQSRNIAGAK 447

Query: 221 KLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGF 280
           +LL  M  + ++ D+ TY TL+A +CK+G    A+ + D+  +     ++V YNS++ G 
Sbjct: 448 QLLSSMIVRGIKPDMVTYGTLVAGHCKEGKIEAAVQIYDKTVKADGKSNLVVYNSILDGL 507

Query: 281 CREGRMREARRLFRDIK-GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVV 339
           C++G +  AR L   ++     + VTY TL+ G+C   ++E+A  L   M   G    +V
Sbjct: 508 CKQGSIDAARLLVDKLQQNGFLDSVTYNTLLHGFCVNGEVEKAFALFLEMINVGSLVNIV 567

Query: 340 TYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRM 399
           +YN ++  LCK G I+ A  L+  M  + I PD +T  TLI  + K   + + +++ + M
Sbjct: 568 SYNIMINFLCKMGLIQQAMELMRAMASQGIVPDLITYTTLITNFVKSYGSDNVIELHDYM 627

Query: 400 LEAGLMLDQFTYKALI 415
           +  G + D+ TY++L+
Sbjct: 628 VLKGAVPDRQTYQSLV 643



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 94/352 (26%), Positives = 162/352 (46%), Gaps = 15/352 (4%)

Query: 106 LRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHL 165
           +R   S  +VL  ++K+    D N    + L+  YA         ++ D+M    L+P  
Sbjct: 300 IRRLESAKNVLAEMIKL--GIDSNERTYAPLIDGYARKGSLDVAFRLCDEMVETRLIPD- 356

Query: 166 HACTVLLNSLA-----KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVE 220
              TV+ NSL      +  L +  + +   M+   ++ +   Y++L    C S  ++K  
Sbjct: 357 ---TVVYNSLIYWLYIEGELEEASF-LLSDMINRRILPDEFTYSILTKGLCLSGHLNKAL 412

Query: 221 KLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGF 280
           ++   +  +++  D +T+N LI    +      A  +   M   GI PD+VTY +L+ G 
Sbjct: 413 RVHYYIVERNLVKDAYTHNILINYMFQSRNIAGAKQLLSSMIVRGIKPDMVTYGTLVAGH 472

Query: 281 CREGRMREARRLF-RDIKG-ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGV 338
           C+EG++  A +++ + +K     N V Y +++DG C+   ++ A  L + +   G +   
Sbjct: 473 CKEGKIEAAVQIYDKTVKADGKSNLVVYNSILDGLCKQGSIDAARLLVDKLQQNG-FLDS 531

Query: 339 VTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNR 398
           VTYN++L   C  G +  A  L  EM       + V+ N +IN  CK+G    AM++   
Sbjct: 532 VTYNTLLHGFCVNGEVEKAFALFLEMINVGSLVNIVSYNIMINFLCKMGLIQQAMELMRA 591

Query: 399 MLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLV 450
           M   G++ D  TY  LI  F K+   D   EL   M+  G  P   +Y  LV
Sbjct: 592 MASQGIVPDLITYTTLITNFVKSYGSDNVIELHDYMVLKGAVPDRQTYQSLV 643


>gi|255660816|gb|ACU25577.1| pentatricopeptide repeat-containing protein [Junellia seriphioides]
          Length = 418

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 119/409 (29%), Positives = 218/409 (53%), Gaps = 3/409 (0%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS-VLNALVKIHDDPDGNSH 131
            ++H+LQS+ TMIH L  ++    A+ +++ +  R    + S V  A+++       + +
Sbjct: 8   TFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGQGSASAVFAAILETKGTQRSDIY 67

Query: 132 VLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKM 191
           V S L+  Y      +D ++ +   + H        C  +L  L K +   +VW  Y+  
Sbjct: 68  VFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEDS 127

Query: 192 VQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMH 251
           ++ G  A+++ +N+L+H  CK  ++   + +   +    +R    ++NTL+  Y + G  
Sbjct: 128 LECGYPASLYFFNILMHRFCKEGEIKLAQSVFDAITKWGLRPTAVSFNTLMNGYIRLGDL 187

Query: 252 YEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTL 309
            E   +++ M+  G+ PD+ TY+ LI+G C+E +M  A  LF ++   G  PN VT+TTL
Sbjct: 188 DEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDYANELFNEMLDNGLVPNGVTFTTL 247

Query: 310 IDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI 369
           IDG+C+   ++ A+ + + M ++ + P ++TYN+++  LCK+G ++ A  L++EM+ K +
Sbjct: 248 IDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGL 307

Query: 370 APDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKE 429
            PD VT  TLI+  CK GD  +A + + RM++  + LD   Y ALI G C+      A++
Sbjct: 308 KPDKVTYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEK 367

Query: 430 LLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDV 478
           +L  ML  G  P   +Y+ +++ +C K +     KL+ E    G    V
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSV 416



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 90/279 (32%), Positives = 147/279 (52%), Gaps = 2/279 (0%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           G    +  +N L+H FC+EG ++ A+ +F  I   G  P  V++ TL++GY R  DL+E 
Sbjct: 131 GYPASLYFFNILMHRFCKEGEIKLAQSVFDAITKWGLRPTAVSFNTLMNGYIRLGDLDEG 190

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            RL+  M A GV P V TY+ ++  LCKE ++  AN L NEM +  + P+ VT  TLI+ 
Sbjct: 191 FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDYANELFNEMLDNGLVPNGVTFTTLIDG 250

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +CK G    AM++  +ML   L  D  TY  LI+G CK  ++  A++L+  M   G  P 
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPD 310

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ L+DG C + + E   +     +   + +D   Y ALI   C++ +   A+++  
Sbjct: 311 KVTYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLR 370

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
            M   G+  +   YT +   + + G+    S ++ +M R
Sbjct: 371 EMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQR 409



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 88/312 (28%), Positives = 149/312 (47%), Gaps = 28/312 (8%)

Query: 247 KKGMHYEALAVQDRMEREGIS-PDIVTYNSLIHGFCREGRMREARRLFRDIKGATPNH-- 303
           +KG    +      +E +G    DI  ++ LI  +   G +R+A   +R     T  H  
Sbjct: 42  RKGQGSASAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYR----LTKEHKF 97

Query: 304 -VTYTTLIDGYCRANDLEEALRLREVMAAKGVY---------PGVVTYNSILRKLCKEGR 353
            V + T     CR   LE  ++L+      G Y           +  +N ++ + CKEG 
Sbjct: 98  RVPFDT-----CR-KVLEHLMKLKYFKLVWGFYEDSLECGYPASLYFFNILMHRFCKEGE 151

Query: 354 IRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKA 413
           I+ A  + + + +  + P  V+ NTL+N Y ++GD     ++KN M  +G+  D +TY  
Sbjct: 152 IKLAQSVFDAITKWGLRPTAVSFNTLMNGYIRLGDLDEGFRLKNAMQASGVQPDVYTYSV 211

Query: 414 LIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
           LI+G CK  +MD A EL   MLD G  P+  +++ L+DG+C     +  +++  + +S+ 
Sbjct: 212 LINGLCKESKMDYANELFNEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQS 271

Query: 474 LCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACS 533
           L  D+  Y  LI   CKK  +  AQ L + M   G+  D V YT+L     + G+ +   
Sbjct: 272 LSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKVTYTTLIDGSCKEGDLETAF 331

Query: 534 DILDDMYRRRLM 545
           +     YR+R++
Sbjct: 332 E-----YRKRMI 338



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 87/314 (27%), Positives = 145/314 (46%), Gaps = 23/314 (7%)

Query: 66  WAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDD 125
           + +S    Y  SL     ++H   K    K AQ++ + I       T    N L+     
Sbjct: 124 YEDSLECGYPASLYFFNILMHRFCKEGEIKLAQSVFDAITKWGLRPTAVSFNTLMN---- 179

Query: 126 PDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVW 185
                         Y  L    +G ++ + M+   + P ++  +VL+N L K+   D   
Sbjct: 180 -------------GYIRLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDYAN 226

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
           +++ +M+  G+V N   +  LI   CK+  VD   ++  +M  + +  DL TYNTLI   
Sbjct: 227 ELFNEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 286

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA----RRLFRDIKGATP 301
           CKKG   +A  + D M  +G+ PD VTY +LI G C+EG +  A    +R+ ++      
Sbjct: 287 CKKGDLKQAQDLIDEMSMKGLKPDKVTYTTLIDGSCKEGDLETAFEYRKRMIKE--NIRL 344

Query: 302 NHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLL 361
           + V YT LI G C+     +A ++   M + G+ P + TY  I+ + CK+G +   ++L+
Sbjct: 345 DDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLM 404

Query: 362 NEMNEKKIAPDNVT 375
            EM      P  VT
Sbjct: 405 KEMQRDGYVPSVVT 418



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 84/358 (23%), Positives = 151/358 (42%), Gaps = 14/358 (3%)

Query: 232 RADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARR 291
           R+D++ ++ LI  Y + G   +A+      +         T   ++    +    +    
Sbjct: 63  RSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG 122

Query: 292 LFRD-IKGATPNHVTY-TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLC 349
            + D ++   P  + +   L+  +C+  +++ A  + + +   G+ P  V++N+++    
Sbjct: 123 FYEDSLECGYPASLYFFNILMHRFCKEGEIKLAQSVFDAITKWGLRPTAVSFNTLMNGYI 182

Query: 350 KEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQF 409
           + G + +  RL N M    + PD  T + LIN  CK      A ++ N ML+ GL+ +  
Sbjct: 183 RLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDYANELFNEMLDNGLVPNGV 242

Query: 410 TYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEF 469
           T+  LI G CK   +D+A E+   ML    SP   +Y+ L+ G C K + +    L+DE 
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302

Query: 470 VSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEP 529
             +GL  D   Y  LI   CK+  ++ A      M    I  D V YT+L     + G  
Sbjct: 303 SMKGLKPDKVTYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRS 362

Query: 530 KACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKEMQ 587
                +L +M    L   +  Y      + K  ++    W+           + KEMQ
Sbjct: 363 VDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDV----WT--------GSKLMKEMQ 408


>gi|255660776|gb|ACU25557.1| pentatricopeptide repeat-containing protein [Verbena perennis]
          Length = 418

 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 117/404 (28%), Positives = 220/404 (54%), Gaps = 3/404 (0%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS-VLNALVKIHDDPDGNSH 131
            ++H+LQS+ TMIH L  ++    A+ +++ +  R    + S V   +++       + +
Sbjct: 8   TFRHNLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAXILETKGTQRSDIY 67

Query: 132 VLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKM 191
           V S L+  Y      +D ++ +   + H        C  +L  L K +   +VW  Y++ 
Sbjct: 68  VFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEES 127

Query: 192 VQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMH 251
           ++ G  A+++ +N+L+H+  K  ++   + +   +    +R  + ++NTL+  Y K G  
Sbjct: 128 LECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDL 187

Query: 252 YEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTL 309
            E   +++ M+  G+ PD+ TY+ LI+G C+E +M +A  LF ++   G  PN VT+TTL
Sbjct: 188 DEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTL 247

Query: 310 IDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI 369
           IDG+C+   ++ A+ + ++M ++ + P ++TYN+++  LCK+G ++ A  L++EM+ K +
Sbjct: 248 IDGHCKNGRVDLAMEIYKLMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGL 307

Query: 370 APDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKE 429
            PD +T  TLI+  CK GD  +A + + RM++  + LD   Y ALI G C+      A++
Sbjct: 308 KPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEK 367

Query: 430 LLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
           +L  ML  G  P   +Y+ +++ +C K +     KLL E    G
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 90/283 (31%), Positives = 147/283 (51%), Gaps = 2/283 (0%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           G    +  +N L+H F +EG +R A+ +F  I      P+ V++ TL++GY +  DL+E 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEG 190

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            RL+  M A GV P V TY+ ++  LCKE ++ DAN L +EM +  + P+ VT  TLI+ 
Sbjct: 191 FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDG 250

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +CK G    AM++   ML   L  D  TY  LI+G CK  ++  A++L+  M   G  P 
Sbjct: 251 HCKNGRVDLAMEIYKLMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPD 310

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ L+DG C + + E   +     +   + +D   Y ALI   C++ +   A+++  
Sbjct: 311 KITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLR 370

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
            M   G+  +   YT +   + + G+    S +L +M R   M
Sbjct: 371 EMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYM 413



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 96/344 (27%), Positives = 156/344 (45%), Gaps = 45/344 (13%)

Query: 232 RADLFTYNTLIALYCKKGMHYEALA-VQDRMEREGISP-----------------DIVTY 273
           R +L +Y T+I   C   M  EA   +Q  + R+G                    DI  +
Sbjct: 10  RHNLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAXILETKGTQRSDIYVF 69

Query: 274 NSLIHGFCREGRMREARRLFRDIKGATPNH---VTYTTLIDGYCRANDLEEALRLREVMA 330
           + LI  +   G +R+A   +R     T  H   V + T     CR   LE  ++L+    
Sbjct: 70  SGLITAYLESGFLRDAIECYR----LTKEHKFRVPFDT-----CRKV-LEHLMKLKYFKL 119

Query: 331 AKGVY---------PGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
             G Y           +  +N ++    KEG IR A  + + + +  + P  V+ NTL+N
Sbjct: 120 VWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMN 179

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
            Y K+GD     ++KN M  +G+  D +TY  LI+G CK  +MD A EL   MLD G  P
Sbjct: 180 GYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVP 239

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
           +  +++ L+DG+C     +  +++    +S+ L  D+  Y  LI   CKK  +  AQ L 
Sbjct: 240 NGVTFTTLIDGHCKNGRVDLAMEIYKLMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLI 299

Query: 502 NLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
           + M   G+  D + YT+L     + G+ +   +     YR+R++
Sbjct: 300 DEMSMKGLKPDKITYTTLIDGNCKEGDLETAFE-----YRKRMI 338



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 88/318 (27%), Positives = 151/318 (47%), Gaps = 31/318 (9%)

Query: 66  WAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKI---ALR-DFLSTPSVLNALVK 121
           + ES    Y  SL     ++H   K    + AQ++ + I   +LR   +S  +++N  +K
Sbjct: 124 YEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIK 183

Query: 122 IHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLT 181
           + D                       +G ++ + M+   + P ++  +VL+N L K+   
Sbjct: 184 LGD---------------------LDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKM 222

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
           D   +++ +M+  G+V N   +  LI   CK+  VD   ++   M  + +  DL TYNTL
Sbjct: 223 DDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKLMLSQSLSPDLITYNTL 282

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA----RRLFRDIK 297
           I   CKKG   +A  + D M  +G+ PD +TY +LI G C+EG +  A    +R+ ++  
Sbjct: 283 IYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKE-- 340

Query: 298 GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDA 357
               + V YT LI G C+     +A ++   M + G+ P + TY  I+ + CK+G +   
Sbjct: 341 NIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTG 400

Query: 358 NRLLNEMNEKKIAPDNVT 375
           ++LL EM      P  VT
Sbjct: 401 SKLLKEMQRDGYMPSVVT 418


>gi|255660824|gb|ACU25581.1| pentatricopeptide repeat-containing protein [Mulguraea aspera]
          Length = 418

 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 118/409 (28%), Positives = 219/409 (53%), Gaps = 3/409 (0%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS-VLNALVKIHDDPDGNSH 131
            ++H+LQS+ TMIH L  ++    A+ +++ +  R    + S V  A+++       + +
Sbjct: 8   TFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDXY 67

Query: 132 VLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKM 191
           V S L+  Y      +D ++ +   + H        C  ++  L K +   +VW  Y++ 
Sbjct: 68  VFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWGFYEES 127

Query: 192 VQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMH 251
           ++ G  A+++ +N+L+H  CK  ++   + +   +    +R  + ++NTL+  Y K G  
Sbjct: 128 LECGYPASLYFFNILMHXFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDL 187

Query: 252 YEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTL 309
            E   ++  M+  G+ PD+ TY+ LI+G C+E +M +A  LF ++   G  PN VT+TTL
Sbjct: 188 DEGFRLKSVMQASGVHPDVYTYSVLINGLCKESKMDDANELFDEMLBNGLVPNXVTFTTL 247

Query: 310 IDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI 369
           IDG+C+   ++ A+ +   M ++ + P ++TYN+++  LCK+G ++ A+ L++EM+ K +
Sbjct: 248 IDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGL 307

Query: 370 APDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKE 429
            PD +T  TLI+  CK GD  +A + + RM++  +  D   Y ALI G C+      A++
Sbjct: 308 KPDKITYTTLIDGXCKEGDLETAFEYRKRMIKENIRXDDVAYTALISGLCQEGRSVDAEK 367

Query: 430 LLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDV 478
           +L  ML  G  P   +Y+ +++  C K +     KLL E    G   +V
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEXCKKGDVWTGSKLLKEMQRXGYVPNV 416



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 92/279 (32%), Positives = 149/279 (53%), Gaps = 2/279 (0%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           G    +  +N L+H FC+EG +R A+ +F  I   G  P+ V++ TL++GY +  DL+E 
Sbjct: 131 GYPASLYFFNILMHXFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEG 190

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            RL+ VM A GV+P V TY+ ++  LCKE ++ DAN L +EM +  + P+ VT  TLI+ 
Sbjct: 191 FRLKSVMQASGVHPDVYTYSVLINGLCKESKMDDANELFDEMLBNGLVPNXVTFTTLIDG 250

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +CK G    AM++  +ML   L+ D  TY  LI+G CK  ++  A +L+  M   G  P 
Sbjct: 251 HCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPD 310

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ L+DG C + + E   +     +   +  D   Y ALI   C++ +   A+++  
Sbjct: 311 KITYTTLIDGXCKEGDLETAFEYRKRMIKENIRXDDVAYTALISGLCQEGRSVDAEKMLR 370

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
            M   G+  +   YT +     + G+    S +L +M R
Sbjct: 371 EMLSVGLKPEIGTYTMIINEXCKKGDVWTGSKLLKEMQR 409



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 89/318 (27%), Positives = 151/318 (47%), Gaps = 31/318 (9%)

Query: 66  WAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKI---ALR-DFLSTPSVLNALVK 121
           + ES    Y  SL     ++H   K    + AQ++ + I    LR   +S  +++N  +K
Sbjct: 124 YEESLECGYPASLYFFNILMHXFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYIK 183

Query: 122 IHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLT 181
           I D                       +G ++   M+   + P ++  +VL+N L K+   
Sbjct: 184 IGD---------------------LDEGFRLKSVMQASGVHPDVYTYSVLINGLCKESKM 222

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
           D   +++ +M+  G+V N   +  LI   CK+  VD   ++  +M  + +  DL TYNTL
Sbjct: 223 DDANELFDEMLBNGLVPNXVTFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTL 282

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA----RRLFRDIK 297
           I   CKKG   +A  + D M  +G+ PD +TY +LI G C+EG +  A    +R+ ++  
Sbjct: 283 IYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGXCKEGDLETAFEYRKRMIKE-- 340

Query: 298 GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDA 357
               + V YT LI G C+     +A ++   M + G+ P + TY  I+ + CK+G +   
Sbjct: 341 NIRXDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEXCKKGDVWTG 400

Query: 358 NRLLNEMNEKKIAPDNVT 375
           ++LL EM      P+ VT
Sbjct: 401 SKLLKEMQRXGYVPNVVT 418



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 93/344 (27%), Positives = 155/344 (45%), Gaps = 45/344 (13%)

Query: 232 RADLFTYNTLIALYCKKGMHYEALA-VQDRMEREGISP-----------------DIVTY 273
           R  L +Y T+I   C   M  EA   +Q  + R+G                    D   +
Sbjct: 10  RHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDXYVF 69

Query: 274 NSLIHGFCREGRMREARRLFRDIKGATPNH---VTYTTLIDGYCRANDLEEALRLREVMA 330
           + LI  +   G +R+A   +R     T  H   V + T     CR   +E  ++L+    
Sbjct: 70  SGLITAYLESGFLRDAIECYR----LTKEHKFRVPFDT-----CR-KVIEHLMKLKYFKL 119

Query: 331 AKGVY---------PGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
             G Y           +  +N ++   CKEG IR A  + + + +  + P  V+ NTL+N
Sbjct: 120 VWGFYEESLECGYPASLYFFNILMHXFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMN 179

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
            Y KIGD     ++K+ M  +G+  D +TY  LI+G CK  +MD A EL   MLB G  P
Sbjct: 180 GYIKIGDLDEGFRLKSVMQASGVHPDVYTYSVLINGLCKESKMDDANELFDEMLBNGLVP 239

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
           +  +++ L+DG+C     +  +++  + +S+ L  D+  Y  LI   CKK  +  A  L 
Sbjct: 240 NXVTFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLI 299

Query: 502 NLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
           + M   G+  D + YT+L     + G+ +   +     YR+R++
Sbjct: 300 DEMSMKGLKPDKITYTTLIDGXCKEGDLETAFE-----YRKRMI 338



 Score = 82.0 bits (201), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 90/192 (46%)

Query: 377 NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD 436
           N L++ +CK G+   A  V + + + GL     ++  L++G+ K  ++D    L   M  
Sbjct: 140 NILMHXFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEGFRLKSVMQA 199

Query: 437 AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDY 496
           +G  P   +YS L++G C ++  +   +L DE +  GL  +   +  LI   CK  +VD 
Sbjct: 200 SGVHPDVYTYSVLINGLCKESKMDDANELFDEMLBNGLVPNXVTFTTLIDGHCKNGRVDL 259

Query: 497 AQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSA 556
           A  ++  M    +L D + Y +L Y   + G+ K   D++D+M  + L      Y +   
Sbjct: 260 AMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLID 319

Query: 557 SYAKDNEILDLF 568
              K+ ++   F
Sbjct: 320 GXCKEGDLETAF 331



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/278 (23%), Positives = 114/278 (41%), Gaps = 18/278 (6%)

Query: 305 TYTTLIDGYCRANDLEEALRLREVM-------AAKGVYPGVV-----------TYNSILR 346
           +Y T+I   C    L EA  L +++       +A  V+  ++            ++ ++ 
Sbjct: 15  SYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDXYVFSGLIT 74

Query: 347 KLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLML 406
              + G +RDA        E K      TC  +I    K+             LE G   
Sbjct: 75  AYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWGFYEESLECGYPA 134

Query: 407 DQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLL 466
             + +  L+H FCK  E+ +A+ +   +   G  PS  S++ L++GY    + +   +L 
Sbjct: 135 SLYFFNILMHXFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEGFRLK 194

Query: 467 DEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRA 526
               + G+  DV  Y  LI   CK+ K+D A  LF+ M  NG++ + V +T+L   + + 
Sbjct: 195 SVMQASGVHPDVYTYSVLINGLCKESKMDDANELFDEMLBNGLVPNXVTFTTLIDGHCKN 254

Query: 527 GEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
           G      +I   M  + L+  L  Y +      K  ++
Sbjct: 255 GRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDL 292


>gi|255660856|gb|ACU25597.1| pentatricopeptide repeat-containing protein [Bouchea fluminensis]
          Length = 418

 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 120/404 (29%), Positives = 215/404 (53%), Gaps = 3/404 (0%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFL-STPSVLNALVKIHDDPDGNSH 131
            Y+H+L S+ TMIH L  ++    A++++  +  R    ST +V  A+++       + +
Sbjct: 8   TYRHTLHSYCTMIHFLCTHQMLVEAKSLIRVVVSRKGKDSTSAVFAAILETKGTQISDLY 67

Query: 132 VLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKM 191
           V S L++ Y      +D +Q F   + H +      C  +L  L K R   +VW  YK++
Sbjct: 68  VFSGLMLAYLESGFVRDAIQCFRLTKKHKIWVPFDTCRKVLEHLMKLRYFRLVWGFYKEI 127

Query: 192 VQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMH 251
           ++ G   +++ +N+L+H  CK  ++   + +   +    +R  + ++NTL+  Y + G  
Sbjct: 128 LECGYPPSLYFFNILMHRFCKEGEMRLAQMVFDAITKWSLRPSVVSFNTLMNGYIRLGDL 187

Query: 252 YEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTL 309
            E   ++  M   G+ PD+ TY+ LI+G C+E +M EA  +  ++   G  PN VT+TTL
Sbjct: 188 DEGFRLKSAMHATGVQPDVYTYSVLINGLCKESKMDEANEMLNEMLDNGLVPNGVTFTTL 247

Query: 310 IDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI 369
           IDG+C+   ++ A+ + + M ++G  P ++TYN+++  LC+ G +  A  L+ EM  K +
Sbjct: 248 IDGHCKNGKVDLAMEIYKQMLSQGFLPDLITYNTLIYGLCRRGDLGQARDLVEEMIMKGL 307

Query: 370 APDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKE 429
            PD +T  TLI+  CK GD     +++ RM+   + LD+ TY ALI G C+      A++
Sbjct: 308 KPDKITYTTLIDGSCKEGDLEITFELRKRMIRENIRLDEVTYTALISGLCREGRAGDAEK 367

Query: 430 LLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
           +L  ML  G  P   +Y+ +++ +C   + +   KLL E    G
Sbjct: 368 MLREMLTVGLKPDNGTYTMIMNEFCKTGDVKTASKLLREMQRNG 411



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 95/279 (34%), Positives = 155/279 (55%), Gaps = 2/279 (0%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           G  P +  +N L+H FC+EG MR A+ +F  I      P+ V++ TL++GY R  DL+E 
Sbjct: 131 GYPPSLYFFNILMHRFCKEGEMRLAQMVFDAITKWSLRPSVVSFNTLMNGYIRLGDLDEG 190

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            RL+  M A GV P V TY+ ++  LCKE ++ +AN +LNEM +  + P+ VT  TLI+ 
Sbjct: 191 FRLKSAMHATGVQPDVYTYSVLINGLCKESKMDEANEMLNEMLDNGLVPNGVTFTTLIDG 250

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +CK G    AM++  +ML  G + D  TY  LI+G C+  ++  A++L+  M+  G  P 
Sbjct: 251 HCKNGKVDLAMEIYKQMLSQGFLPDLITYNTLIYGLCRRGDLGQARDLVEEMIMKGLKPD 310

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ L+DG C + + E   +L    +   + +D   Y ALI   C++ +   A+++  
Sbjct: 311 KITYTTLIDGSCKEGDLEITFELRKRMIRENIRLDEVTYTALISGLCREGRAGDAEKMLR 370

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
            M   G+  D+  YT +   + + G+ K  S +L +M R
Sbjct: 371 EMLTVGLKPDNGTYTMIMNEFCKTGDVKTASKLLREMQR 409



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 91/362 (25%), Positives = 162/362 (44%), Gaps = 34/362 (9%)

Query: 232 RADLFTYNTLIALYCKKGMHYEALA----VQDRMEREGISP--------------DIVTY 273
           R  L +Y T+I   C   M  EA +    V  R  ++  S               D+  +
Sbjct: 10  RHTLHSYCTMIHFLCTHQMLVEAKSLIRVVVSRKGKDSTSAVFAAILETKGTQISDLYVF 69

Query: 274 NSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKG 333
           + L+  +   G +R+A + FR     T  H  +       CR   LE  ++LR      G
Sbjct: 70  SGLMLAYLESGFVRDAIQCFR----LTKKHKIWVPF--DTCR-KVLEHLMKLRYFRLVWG 122

Query: 334 VY---------PGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
            Y         P +  +N ++ + CKEG +R A  + + + +  + P  V+ NTL+N Y 
Sbjct: 123 FYKEILECGYPPSLYFFNILMHRFCKEGEMRLAQMVFDAITKWSLRPSVVSFNTLMNGYI 182

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           ++GD     ++K+ M   G+  D +TY  LI+G CK  +MD A E+L  MLD G  P+  
Sbjct: 183 RLGDLDEGFRLKSAMHATGVQPDVYTYSVLINGLCKESKMDEANEMLNEMLDNGLVPNGV 242

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
           +++ L+DG+C     +  +++  + +S+G   D+  Y  LI   C++  +  A+ L   M
Sbjct: 243 TFTTLIDGHCKNGKVDLAMEIYKQMLSQGFLPDLITYNTLIYGLCRRGDLGQARDLVEEM 302

Query: 505 QGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
              G+  D + YT+L     + G+ +   ++   M R  + +    Y +  +   ++   
Sbjct: 303 IMKGLKPDKITYTTLIDGSCKEGDLEITFELRKRMIRENIRLDEVTYTALISGLCREGRA 362

Query: 565 LD 566
            D
Sbjct: 363 GD 364



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 74/240 (30%), Positives = 119/240 (49%), Gaps = 6/240 (2%)

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
           Y  L    +G ++   M    + P ++  +VL+N L K+   D   ++  +M+  G+V N
Sbjct: 181 YIRLGDLDEGFRLKSAMHATGVQPDVYTYSVLINGLCKESKMDEANEMLNEMLDNGLVPN 240

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
              +  LI   CK+  VD   ++  +M  +    DL TYNTLI   C++G   +A  + +
Sbjct: 241 GVTFTTLIDGHCKNGKVDLAMEIYKQMLSQGFLPDLITYNTLIYGLCRRGDLGQARDLVE 300

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREA----RRLFRDIKGATPNHVTYTTLIDGYCR 315
            M  +G+ PD +TY +LI G C+EG +       +R+ R+      + VTYT LI G CR
Sbjct: 301 EMIMKGLKPDKITYTTLIDGSCKEGDLEITFELRKRMIRE--NIRLDEVTYTALISGLCR 358

Query: 316 ANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVT 375
                +A ++   M   G+ P   TY  I+ + CK G ++ A++LL EM      P  VT
Sbjct: 359 EGRAGDAEKMLREMLTVGLKPDNGTYTMIMNEFCKTGDVKTASKLLREMQRNGPVPGVVT 418


>gi|255660788|gb|ACU25563.1| pentatricopeptide repeat-containing protein [Verbena hastata]
          Length = 418

 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 118/404 (29%), Positives = 220/404 (54%), Gaps = 3/404 (0%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS-VLNALVKIHDDPDGNSH 131
            ++H+LQS+ TMIH L  ++    A+ +++ +  R    + S V  A+++       + +
Sbjct: 8   TFRHTLQSYCTMIHFLCTHQMRPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIY 67

Query: 132 VLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKM 191
           V S L+  Y      +D ++ +   + H        C  +L  L K +   +VW  Y++ 
Sbjct: 68  VFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEES 127

Query: 192 VQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMH 251
           ++ G  A+++ +N+L+H+  K  ++   + +   +    +R  + ++NTL+  Y K G  
Sbjct: 128 LECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDL 187

Query: 252 YEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTL 309
            E   +++ M+  G+ PD+ TY+ LI+G C+E +M +A  LF ++   G  PN VT+TTL
Sbjct: 188 DEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMIDNGLVPNGVTFTTL 247

Query: 310 IDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI 369
           IDG+C+   ++ A+ + + M ++ + P ++TYN+++  LCK+G ++ A  L++EM+ K +
Sbjct: 248 IDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGL 307

Query: 370 APDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKE 429
            PD +T  TLI+  CK GD  +A + + RM++  + LD   Y ALI G C+      A++
Sbjct: 308 KPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEK 367

Query: 430 LLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
           +L  ML  G  P   +Y+ +++ +C K +     KLL E    G
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 90/283 (31%), Positives = 148/283 (52%), Gaps = 2/283 (0%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           G    +  +N L+H F +EG +R A+ +F  I      P+ V++ TL++GY +  DL+E 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEG 190

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            RL+  M A GV P V TY+ ++  LCKE ++ DAN L +EM +  + P+ VT  TLI+ 
Sbjct: 191 FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMIDNGLVPNGVTFTTLIDG 250

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +CK G    AM++  +ML   L  D  TY  LI+G CK  ++  A++L+  M   G  P 
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPD 310

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ L+DG C + + E   +     +   + +D   Y ALI   C++ +   A+++  
Sbjct: 311 KITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLR 370

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
            M   G+  +   YT +   + + G+    S +L +M R   M
Sbjct: 371 EMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYM 413



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 90/317 (28%), Positives = 152/317 (47%), Gaps = 29/317 (9%)

Query: 66  WAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKI---ALRDFLSTPSVLNALVKI 122
           + ES    Y  SL     ++H   K    + AQ++ + I   +LR     PSV++     
Sbjct: 124 YEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLR-----PSVVS----- 173

Query: 123 HDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTD 182
                      + L+  Y  L    +G ++ + M+   + P ++  +VL+N L K+   D
Sbjct: 174 ----------FNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMD 223

Query: 183 MVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLI 242
              +++ +M+  G+V N   +  LI   CK+  VD   ++  +M  + +  DL TYNTLI
Sbjct: 224 DANELFDEMIDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLI 283

Query: 243 ALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA----RRLFRDIKG 298
              CKKG   +A  + D M  +G+ PD +TY +LI G C+EG +  A    +R+ ++   
Sbjct: 284 YGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKE--N 341

Query: 299 ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDAN 358
              + V YT LI G C+     +A ++   M + G+ P + TY  I+ + CK+G +   +
Sbjct: 342 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGS 401

Query: 359 RLLNEMNEKKIAPDNVT 375
           +LL EM      P  VT
Sbjct: 402 KLLKEMQRDGYMPSVVT 418



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 95/344 (27%), Positives = 156/344 (45%), Gaps = 45/344 (13%)

Query: 232 RADLFTYNTLIALYCKKGMHYEALA-VQDRMEREGISP-----------------DIVTY 273
           R  L +Y T+I   C   M  EA   +Q  + R+G                    DI  +
Sbjct: 10  RHTLQSYCTMIHFLCTHQMRPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVF 69

Query: 274 NSLIHGFCREGRMREARRLFRDIKGATPNH---VTYTTLIDGYCRANDLEEALRLREVMA 330
           + LI  +   G +R+A   +R     T  H   V + T     CR   LE  ++L+    
Sbjct: 70  SGLITAYLESGFLRDAIECYR----LTKEHKFRVPFDT-----CRKV-LEHLMKLKYFKL 119

Query: 331 AKGVY---------PGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
             G Y           +  +N ++    KEG IR A  + + + +  + P  V+ NTL+N
Sbjct: 120 VWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMN 179

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
            Y K+GD     ++KN M  +G+  D +TY  LI+G CK  +MD A EL   M+D G  P
Sbjct: 180 GYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMIDNGLVP 239

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
           +  +++ L+DG+C     +  +++  + +S+ L  D+  Y  LI   CKK  +  AQ L 
Sbjct: 240 NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLI 299

Query: 502 NLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
           + M   G+  D + YT+L     + G+ +   +     YR+R++
Sbjct: 300 DEMSMKGLKPDKITYTTLIDGNCKEGDLETAFE-----YRKRMI 338


>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
 gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
          Length = 617

 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 137/456 (30%), Positives = 229/456 (50%), Gaps = 14/456 (3%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           SV+  + K+   PD  +   + L+    N    ++ + +F++M      P++ +   ++N
Sbjct: 152 SVMGKMFKLGIQPD--AITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVIN 209

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
            L K+  T M  +V++KM Q     N+  YN +I + CK   V++  + L EM  + +  
Sbjct: 210 GLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPP 269

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           D+ TYNT++  +C  G   EA  +   M    + PD VT+N L+ G C+EG + EAR + 
Sbjct: 270 DVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVS 329

Query: 294 RDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
             +  KGA PN  TY  L+DGYC  N ++EA+++  +M  KG  P + +YN ++   CK 
Sbjct: 330 ETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKS 389

Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
            R+ +A RLL+EM+EK + PD VT +TL+   C++G    A+ +   M  +GL+ D   Y
Sbjct: 390 KRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAY 449

Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
             L+ GFCK   +D A +LL  M +    P+   Y+ L+ G       E   +L  +  +
Sbjct: 450 SILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSA 509

Query: 472 RGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKA 531
            G+  D+  Y  +I+   K+   D A   F  M+ +G L DS  Y  +   + +  +   
Sbjct: 510 DGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSST 569

Query: 532 CSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDL 567
              ++D+M  +R          FSA  +    +LDL
Sbjct: 570 AIQLIDEMVGKR----------FSADSSTFQMLLDL 595



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 130/406 (32%), Positives = 207/406 (50%), Gaps = 2/406 (0%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D L  F +M   N  P +      L S+AK +       +  +M   GV  N++  NVLI
Sbjct: 79  DALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVLI 138

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           +  C+ S VD    ++ +M    ++ D  T+NTLI   C +G   EA+ + + M   G  
Sbjct: 139 NCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHE 198

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDIKG--ATPNHVTYTTLIDGYCRANDLEEALRL 325
           P++++YN++I+G C+ G    A R+FR ++     PN VTY T+ID  C+   + EA+  
Sbjct: 199 PNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEF 258

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
              M  +G+ P VVTYN+IL   C  G++ +A RL  EM  + + PD VT N L++  CK
Sbjct: 259 LSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCK 318

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            G  + A  V   M E G   + +TY AL+ G+C   +MD A ++L  M+  G +P+  S
Sbjct: 319 EGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSS 378

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+ L++GYC         +LL E   + L  D   Y  L++  C+  +   A  LF  M 
Sbjct: 379 YNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMC 438

Query: 506 GNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIY 551
            +G+L D + Y+ L   + + G       +L +M+ RR+   + +Y
Sbjct: 439 SSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILY 484



 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 121/401 (30%), Positives = 197/401 (49%), Gaps = 2/401 (0%)

Query: 141 ANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANI 200
           A  K     + + +QM +  +  ++++  VL+N L +    D    V  KM +LG+  + 
Sbjct: 107 AKKKQYSSAVSLCNQMDLFGVTHNVYSLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDA 166

Query: 201 HLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDR 260
             +N LI+  C    + +   L  EM +     ++ +YNT+I   CK G    A+ V  +
Sbjct: 167 ITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRK 226

Query: 261 MEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRAND 318
           ME+    P++VTYN++I   C++  + EA     ++  +G  P+ VTY T++ G+C    
Sbjct: 227 MEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQ 286

Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT 378
           L EA RL + M  + V P  VT+N ++  LCKEG + +A  +   M EK   P+  T N 
Sbjct: 287 LNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNA 346

Query: 379 LINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAG 438
           L++ YC       A+KV   M+  G   +  +Y  LI+G+CK+K M+ AK LL  M +  
Sbjct: 347 LMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKN 406

Query: 439 FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQ 498
            +P   +YS L+ G C        L L  E  S GL  D+  Y  L+  FCK   +D A 
Sbjct: 407 LTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEAL 466

Query: 499 RLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
           +L   M    I  + ++YT L    + AG+ +   ++   +
Sbjct: 467 KLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKL 507



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 57/236 (24%), Positives = 104/236 (44%), Gaps = 2/236 (0%)

Query: 312 GYCRANDL--EEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI 369
           G   +ND+  ++AL     M      P VV +   L  + K+ +   A  L N+M+   +
Sbjct: 68  GSNTSNDISIDDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGV 127

Query: 370 APDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKE 429
             +  + N LIN  C++     A+ V  +M + G+  D  T+  LI+G C   ++  A  
Sbjct: 128 THNVYSLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVG 187

Query: 430 LLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFC 489
           L   M+ +G  P+  SY+ +++G C   N    +++  +        +V  Y  +I   C
Sbjct: 188 LFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLC 247

Query: 490 KKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
           K   V+ A    + M   GI  D V Y ++ + +   G+    + +  +M  R +M
Sbjct: 248 KDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVM 303


>gi|410109875|gb|AFV61017.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
           herrerae]
          Length = 395

 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 119/393 (30%), Positives = 217/393 (55%), Gaps = 3/393 (0%)

Query: 79  QSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS-VLNALVKIHDDPDGNSHVLSWLV 137
            S+ TMIH L  ++    A+++++ +  R    + S V  A+++       + +V S L+
Sbjct: 1   HSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLI 60

Query: 138 IFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVV 197
             Y      +D ++ +   R H     L  C  +L  L K +   +VW  YK++++ G  
Sbjct: 61  TXYLESGFLRDAIECYRLTREHKFWVPLDXCRKVLEHLMKLKYFKLVWGFYKEILECGYP 120

Query: 198 ANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAV 257
           A+++ +N+L+H  CK  D+   + +   +    +R  + ++NTL+  Y + G   E   +
Sbjct: 121 ASLYFFNILMHRFCKEGDIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRL 180

Query: 258 QDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCR 315
           ++ M   G+ PD+ TY+ LI+G C+E +M +A  LF ++  KG  PN VT+TTLIDG+C+
Sbjct: 181 KNAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCK 240

Query: 316 ANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVT 375
              ++ A+ + + M ++ + P ++TYN++   LCK+G ++ A+ L++EM+ K + PD +T
Sbjct: 241 NGRVDLAMEIYKQMLSQSLSPDLITYNTLTYGLCKKGDLKQAHDLIDEMSMKGLKPDKIT 300

Query: 376 CNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGML 435
             TLI+  CK GD  +A + + RM++  + LD   Y ALI G C+      A+++L  ML
Sbjct: 301 YTTLIDGCCKEGDMETAFEHQKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREML 360

Query: 436 DAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
             G  P+  +Y+ +++ +C K +     KLL E
Sbjct: 361 SVGLKPNXGTYTMIINEFCKKGDVWTGSKLLKE 393



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 92/277 (33%), Positives = 148/277 (53%), Gaps = 2/277 (0%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           G    +  +N L+H FC+EG +R A+ +F  I   G  P+ V++ TL++GY R  DL+E 
Sbjct: 118 GYPASLYFFNILMHRFCKEGDIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEG 177

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            RL+  M A GV P V TY+ ++  LCKE ++ DAN L +EM +K + P+ VT  TLI+ 
Sbjct: 178 FRLKNAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDG 237

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +CK G    AM++  +ML   L  D  TY  L +G CK  ++  A +L+  M   G  P 
Sbjct: 238 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLTYGLCKKGDLKQAHDLIDEMSMKGLKPD 297

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ L+DG C + + E   +     +   + +D  VY ALI   C++ +   A+++  
Sbjct: 298 KITYTTLIDGCCKEGDMETAFEHQKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLR 357

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
            M   G+  +   YT +   + + G+    S +L +M
Sbjct: 358 EMLSVGLKPNXGTYTMIINEFCKKGDVWTGSKLLKEM 394



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 83/316 (26%), Positives = 149/316 (47%), Gaps = 17/316 (5%)

Query: 261 MEREGIS-PDIVTYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDL 319
           +E +G    DI  ++ LI  +   G +R+A   +R     T  H  +  L    CR   L
Sbjct: 43  LETKGTQRSDIYVFSGLITXYLESGFLRDAIECYR----LTREHKFWVPL--DXCRKV-L 95

Query: 320 EEALRLREVMAAKGVYPGVVT---------YNSILRKLCKEGRIRDANRLLNEMNEKKIA 370
           E  ++L+      G Y  ++          +N ++ + CKEG IR A  + + + +  + 
Sbjct: 96  EHLMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGDIRLAQSVFDAITKWGLR 155

Query: 371 PDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL 430
           P  V+ NTL+N Y ++GD     ++KN M  +G+  D +TY  LI+G CK  +MD A EL
Sbjct: 156 PSVVSFNTLMNGYIRLGDLDEGFRLKNAMHASGVQPDVYTYSVLINGLCKESKMDDANEL 215

Query: 431 LFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCK 490
              MLD G  P+  +++ L+DG+C     +  +++  + +S+ L  D+  Y  L    CK
Sbjct: 216 FDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLTYGLCK 275

Query: 491 KEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKI 550
           K  +  A  L + M   G+  D + YT+L     + G+ +   +    M +  + +   +
Sbjct: 276 KGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDMETAFEHQKRMIQENIRLDDVV 335

Query: 551 YRSFSASYAKDNEILD 566
           Y +  +   ++   +D
Sbjct: 336 YTALISGLCQEGRSVD 351



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 93/369 (25%), Positives = 157/369 (42%), Gaps = 36/369 (9%)

Query: 232 RADLFTYNTLIALYCKKGMHYEALAVQDRMEREG---ISPDI----------VTYNSLIH 278
           R+D++ ++ LI  Y + G   +A+    R+ RE    +  D           + Y  L+ 
Sbjct: 50  RSDIYVFSGLITXYLESGFLRDAIECY-RLTREHKFWVPLDXCRKVLEHLMKLKYFKLVW 108

Query: 279 GFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGV 338
           GF +E  + E         G   +   +  L+  +C+  D+  A  + + +   G+ P V
Sbjct: 109 GFYKE--ILEC--------GYPASLYFFNILMHRFCKEGDIRLAQSVFDAITKWGLRPSV 158

Query: 339 VTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNR 398
           V++N+++    + G + +  RL N M+   + PD  T + LIN  CK      A ++ + 
Sbjct: 159 VSFNTLMNGYIRLGDLDEGFRLKNAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDE 218

Query: 399 MLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNN 458
           ML+ GL+ +  T+  LI G CK   +D+A E+   ML    SP   +Y+ L  G C K +
Sbjct: 219 MLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLTYGLCKKGD 278

Query: 459 EEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTS 518
            +    L+DE   +GL  D   Y  LI   CK+  ++ A      M    I  D V+YT+
Sbjct: 279 LKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDMETAFEHQKRMIQENIRLDDVVYTA 338

Query: 519 LAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLM 578
           L     + G       +L +M    L      Y      + K  ++    W+        
Sbjct: 339 LISGLCQEGRSVDAEKMLREMLSVGLKPNXGTYTMIINEFCKKGDV----WT-------- 386

Query: 579 SKHIFKEMQ 587
              + KEMQ
Sbjct: 387 GSKLLKEMQ 395



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 64/293 (21%), Positives = 122/293 (41%), Gaps = 20/293 (6%)

Query: 272 TYNSLIHGFCREGRMREARRLFR-------------------DIKGATPNHV-TYTTLID 311
           +Y ++IH  C    + EA+ L +                   + KG   + +  ++ LI 
Sbjct: 2   SYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLIT 61

Query: 312 GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAP 371
            Y  +  L +A+    +      +  +     +L  L K    +       E+ E     
Sbjct: 62  XYLESGFLRDAIECYRLTREHKFWVPLDXCRKVLEHLMKLKYFKLVWGFYKEILECGYPA 121

Query: 372 DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
                N L++ +CK GD   A  V + + + GL     ++  L++G+ +  ++D    L 
Sbjct: 122 SLYFFNILMHRFCKEGDIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLK 181

Query: 432 FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
             M  +G  P   +YS L++G C ++  +   +L DE + +GL  +   +  LI   CK 
Sbjct: 182 NAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKN 241

Query: 492 EKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL 544
            +VD A  ++  M    +  D + Y +L Y   + G+ K   D++D+M  + L
Sbjct: 242 GRVDLAMEIYKQMLSQSLSPDLITYNTLTYGLCKKGDLKQAHDLIDEMSMKGL 294



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 57/278 (20%), Positives = 115/278 (41%), Gaps = 53/278 (19%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKI---ALR-DFLSTPSVLNALVKIHDDPDG 128
            Y  SL     ++H   K    + AQ++ + I    LR   +S  +++N  +++ D  +G
Sbjct: 118 GYPASLYFFNILMHRFCKEGDIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEG 177

Query: 129 ------------NSHVLSWLVIFYANLKMTQ--DGLQVFDQMRVHNLMPHLHACTVLLNS 174
                          V ++ V+     K ++  D  ++FD+M    L+P+    T L++ 
Sbjct: 178 FRLKNAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDG 237

Query: 175 LAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL---------------------------- 206
             K+   D+  ++YK+M+   +  ++  YN L                            
Sbjct: 238 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLTYGLCKKGDLKQAHDLIDEMSMKGLKPD 297

Query: 207 -------IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
                  I  CCK  D++   +    M  +++R D   Y  LI+  C++G   +A  +  
Sbjct: 298 KITYTTLIDGCCKEGDMETAFEHQKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLR 357

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK 297
            M   G+ P+  TY  +I+ FC++G +    +L ++++
Sbjct: 358 EMLSVGLKPNXGTYTMIINEFCKKGDVWTGSKLLKEMQ 395


>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Vitis vinifera]
          Length = 665

 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 154/516 (29%), Positives = 239/516 (46%), Gaps = 59/516 (11%)

Query: 79  QSHWTMIHILTKNKHFKSAQNMLEKIAL-----RDFLSTPSVLNALVKIHDDPDGNSHVL 133
           Q +  +IH+LT  K +  A+ ++  +       R      SV N L ++ +      +V 
Sbjct: 71  QLYSAIIHVLTGAKLYAKARCLMRDLIQCLQNSRRSRICCSVFNVLSRL-ESSKFTPNVF 129

Query: 134 SWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQ 193
             L+I ++ + + ++ L V+ +M V   +P + AC ++L+ L K    D +WKVY  MV 
Sbjct: 130 GVLIIAFSEMGLVEEALWVYYKMDV---LPAMQACNMVLDGLVKKGRFDTMWKVYGDMVA 186

Query: 194 LGVVANIHLYNVLIHACCKSSDVDKVEKLLCEM--------------------------- 226
            G   N+  Y  LI  CC+  D  K  +L  EM                           
Sbjct: 187 RGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISE 246

Query: 227 ---EFKDVR-----ADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIH 278
               F+ +R      +L+TYNT++  YCK     +AL +   M  +G+ P++VT+  LI 
Sbjct: 247 AESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILID 306

Query: 279 GFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYP 336
           G C+   M  AR+   D+   G  PN   Y  LIDGYC+A +L EAL L   +    + P
Sbjct: 307 GLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILP 366

Query: 337 GVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVK 396
            V TY+ +++ LC   R+ +A+ LL EM +K   P+ VT NTLI+ YCK G+   A++V 
Sbjct: 367 DVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVC 426

Query: 397 NRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNK 456
           ++M E G+  +  T+  LI G+CKA +M+ A  L   M+  G  P   +Y+ L+DG+   
Sbjct: 427 SQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKD 486

Query: 457 NNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILG----- 511
            N +   +L  E    GL  +V     LI   CK  ++  A +LF    G    G     
Sbjct: 487 GNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNE 546

Query: 512 --------DSVIYTSLAYAYWRAGEPKACSDILDDM 539
                   + V+YT+L       G     S    DM
Sbjct: 547 LDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDM 582



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 105/346 (30%), Positives = 171/346 (49%), Gaps = 7/346 (2%)

Query: 237 TYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI 296
            +  LI  + + G+  EAL V  +M+   + P +   N ++ G  ++GR     +++ D+
Sbjct: 128 VFGVLIIAFSEMGLVEEALWVYYKMD---VLPAMQACNMVLDGLVKKGRFDTMWKVYGDM 184

Query: 297 --KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRI 354
             +GA+PN VTY TLIDG CR  D  +A RL + M  K ++P VV Y  ++R LC E RI
Sbjct: 185 VARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRI 244

Query: 355 RDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKAL 414
            +A  +   M    + P+  T NT+++ YCKI     A+++   ML  GL+ +  T+  L
Sbjct: 245 SEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGIL 304

Query: 415 IHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGL 474
           I G CK  EM  A++ L  M   G  P+   Y+ L+DGYC   N    L L  E     +
Sbjct: 305 IDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEI 364

Query: 475 CVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSD 534
             DV  Y  LI+  C  ++++ A  L   M+  G L ++V Y +L   Y + G  +   +
Sbjct: 365 LPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIE 424

Query: 535 ILDDMYRRRLMITLKIYRSFSASYAKDN--EILDLFWSHVVDRGLM 578
           +   M  + +   +  + +    Y K    E     ++ +V +GL+
Sbjct: 425 VCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLL 470



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 112/385 (29%), Positives = 187/385 (48%), Gaps = 15/385 (3%)

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
           Y  +   +  L+++ +M    L+P++    +L++ L K        K    M   GVV N
Sbjct: 273 YCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPN 332

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
           I +YN LI   CK+ ++ +   L  E+E  ++  D+FTY+ LI   C      EA  +  
Sbjct: 333 IFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQ 392

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRAN 317
            M+++G  P+ VTYN+LI G+C+EG M +A  +   +  KG  PN +T++TLIDGYC+A 
Sbjct: 393 EMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAG 452

Query: 318 DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCN 377
            +E A+ L   M  KG+ P VV Y +++    K+G  ++A RL  EM E  + P+  T +
Sbjct: 453 KMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLS 512

Query: 378 TLINAYCKIGDTASAMKV-------------KNRMLEAGLMLDQFTYKALIHGFCKAKEM 424
            LI+  CK G  + A+K+              N +  +    +   Y ALI G C    +
Sbjct: 513 CLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRI 572

Query: 425 DIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRAL 484
             A +    M  +G  P   +   ++ G+    +   ++ L  + +  G+  + SVYR L
Sbjct: 573 FKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVL 632

Query: 485 IRRFCKKEKVDYAQRLFNLMQGNGI 509
            + + +   +  A R    + G GI
Sbjct: 633 AKGYEESGYLKSALRCSEDLSGIGI 657


>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
 gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
          Length = 529

 Score =  228 bits (580), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 148/515 (28%), Positives = 260/515 (50%), Gaps = 11/515 (2%)

Query: 46  VLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIA 105
           +L  L N    P L   +F W++       HSL+  + +++ L   K +   ++ L+K  
Sbjct: 1   LLQQLLNSGADPELILRYFTWSQKEFK-LSHSLELTFRILNSLAHTKKYSKIRSFLDKFV 59

Query: 106 L--RDFLSTPSVLNALVKIHDDPDGNSHVLSWLVI-FYANLKMTQDGLQVFDQMRVHNLM 162
              +D+ S  ++ +A+    D    NS +   LV+ F  NLK+ + G + F +   +   
Sbjct: 60  KYEKDY-SVSAIFHAISMSGDSFCVNSILADMLVLAFVRNLKILR-GFEAFKRAGDYGFK 117

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
             L +C  LL+ L K+     +  VY++M++  +  N+  +N++++  CK   +++   +
Sbjct: 118 LSLISCNPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDV 177

Query: 223 LCEMEFKDVRADLFTYNTLIALYCKKGM---HYEALAVQDRMEREGISPDIVTYNSLIHG 279
           + +M+   V  ++ TYNTLI  YCK G     Y+A A+   M  +GI P+ VTYN LI G
Sbjct: 178 IEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDG 237

Query: 280 FCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPG 337
           FC++  +  A R+F +++  G  PN VTY  LI+G C    ++EA+ LR+ M +  + P 
Sbjct: 238 FCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPN 297

Query: 338 VVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKN 397
           VVT+N ++   CK   + +A  L N+M ++ + P+ +T  TLI+AYCK G    A  + N
Sbjct: 298 VVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYN 357

Query: 398 RMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKN 457
            M++ G+  +  TY  LI G C+  ++  A+ L+  M+    S    +Y+ L+D  C K 
Sbjct: 358 MMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKG 417

Query: 458 NEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYT 517
                +KLLDE   +GL      Y  L+  +C++  +  A  +   M+  G   + V + 
Sbjct: 418 ESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHN 477

Query: 518 SLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYR 552
            L   +   G  +  + +L++M  R L+     Y 
Sbjct: 478 VLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYE 512



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 116/345 (33%), Positives = 191/345 (55%), Gaps = 5/345 (1%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWK---VYKKMVQLGVVANIHLYNVLIH 208
           V + M+V  + P++     L++   K      ++K   + K+MV  G+  N   YN+LI 
Sbjct: 177 VIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILID 236

Query: 209 ACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISP 268
             CK  +V    ++  EM+ + +R ++ TYN LI   C  G   EA+A++D+M    + P
Sbjct: 237 GFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEP 296

Query: 269 DIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLR 326
           ++VT+N LI+GFC+   + EA  LF D+  +G  PN +TYTTLID YC+   +E+A  L 
Sbjct: 297 NVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALY 356

Query: 327 EVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKI 386
            +M  +G++P V TYN ++  LC++G ++ A  L+NEM  KK++ D VT N LI++ CK 
Sbjct: 357 NMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKK 416

Query: 387 GDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSY 446
           G++  A+K+ + M E GL     TY  L+ G+C+   +  A  +   M   G   +  ++
Sbjct: 417 GESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTH 476

Query: 447 SWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
           + L+ G+C K   E    LL+E + RGL  + + Y  +     +K
Sbjct: 477 NVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEIIKEEMMEK 521



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 101/335 (30%), Positives = 171/335 (51%), Gaps = 5/335 (1%)

Query: 235 LFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR 294
           L + N L++   K+  + +   V   M +  I  +++++N +++G C+ G++  A  +  
Sbjct: 120 LISCNPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIE 179

Query: 295 DIK--GATPNHVTYTTLIDGYC---RANDLEEALRLREVMAAKGVYPGVVTYNSILRKLC 349
           D+K  G +PN +TY TLIDGYC   R   + +A  + + M AKG+ P  VTYN ++   C
Sbjct: 180 DMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFC 239

Query: 350 KEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQF 409
           K+  +  A R+  EM  + + P+ VT N LIN  C  G    A+ ++++M+ + L  +  
Sbjct: 240 KDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVV 299

Query: 410 TYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEF 469
           T+  LI+GFCK K ++ A  L   M   G  P+  +Y+ L+D YC     E    L +  
Sbjct: 300 THNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMM 359

Query: 470 VSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEP 529
           + RG+  +VS Y  LI   C+K  V  A+ L N M    +  D V Y  L  +  + GE 
Sbjct: 360 IDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGES 419

Query: 530 KACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
           +    +LD+M+ + L  +   Y +    Y ++  +
Sbjct: 420 RKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNL 454



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 80/257 (31%), Positives = 130/257 (50%), Gaps = 13/257 (5%)

Query: 102 EKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNL 161
           E +ALRD + +  +         +P+  +H  + L+  +   K   + + +F+ M    +
Sbjct: 281 EAVALRDQMVSSDL---------EPNVVTH--NVLINGFCKNKTVNEAINLFNDMEKQGV 329

Query: 162 MPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEK 221
            P+    T L+++  KD   +  + +Y  M+  G+   +  YN LI   C+  DV     
Sbjct: 330 DPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARS 389

Query: 222 LLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFC 281
           L+ EM  K + AD+ TYN LI   CKKG   +A+ + D M  +G++P  VTYN+L+ G+C
Sbjct: 390 LMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYC 449

Query: 282 REGRMREAR--RLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVV 339
           REG +R A   R   + KG   N VT+  LI G+C    LE+A  L   M  +G+ P   
Sbjct: 450 REGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRT 509

Query: 340 TYNSILRKLCKEGRIRD 356
           TY  I  ++ ++G + D
Sbjct: 510 TYEIIKEEMMEKGFVPD 526



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 70/263 (26%), Positives = 120/263 (45%), Gaps = 10/263 (3%)

Query: 333 GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
           G    +++ N +L  L KE    D   +  EM ++KI  + ++ N ++N  CK+G    A
Sbjct: 115 GFKLSLISCNPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRA 174

Query: 393 MKVKNRMLEAGLMLDQFTYKALIHGFCKAK---EMDIAKELLFGMLDAGFSPSYCSYSWL 449
             V   M   G+  +  TY  LI G+CK     +M  A  +L  M+  G  P+  +Y+ L
Sbjct: 175 GDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNIL 234

Query: 450 VDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGI 509
           +DG+C   N    +++  E   +GL  +V  Y  LI   C   KVD A  L + M  + +
Sbjct: 235 IDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDL 294

Query: 510 LGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLF- 568
             + V +  L   + +        ++ +DM ++ +      Y +   +Y KD  + D F 
Sbjct: 295 EPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFA 354

Query: 569 -WSHVVDRGLMSKHIFKEMQLRN 590
            ++ ++DRG     IF E+   N
Sbjct: 355 LYNMMIDRG-----IFPEVSTYN 372


>gi|255660786|gb|ACU25562.1| pentatricopeptide repeat-containing protein [Verbena canescens]
          Length = 418

 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 117/404 (28%), Positives = 220/404 (54%), Gaps = 3/404 (0%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS-VLNALVKIHDDPDGNSH 131
            ++H+LQS+ TMIH L  ++    A+ +++ +  R    + S V  A+++       + +
Sbjct: 8   TFRHNLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIY 67

Query: 132 VLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKM 191
           V S L+  Y      +D ++ +   + H        C  +L  L K +   +VW  Y++ 
Sbjct: 68  VFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEES 127

Query: 192 VQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMH 251
           ++ G  A+++ +N+L+H+  K  ++   + +   +    +R  + ++NTL+  Y K G  
Sbjct: 128 LECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDL 187

Query: 252 YEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTL 309
            E   +++ M+  G+ PD+ TY+ LI+G C+E +M +A  LF ++   G  PN VT+TTL
Sbjct: 188 DEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTL 247

Query: 310 IDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI 369
           IDG+C+   ++ A+ + + M ++ + P ++TYN+++  LCK+G ++ A  L++EM+ K +
Sbjct: 248 IDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGL 307

Query: 370 APDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKE 429
            PD +T  TLI+  CK GD  +A + + +M++  + LD   Y ALI G C+      A++
Sbjct: 308 KPDKITYTTLIDGNCKEGDLETAFEYRKKMIKENIRLDDVAYTALISGLCQEGRSVDAEK 367

Query: 430 LLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
           +L  ML  G  P   +Y+ +++ +C K +     KLL E    G
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 90/283 (31%), Positives = 149/283 (52%), Gaps = 2/283 (0%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           G    +  +N L+H F +EG +R A+ +F  I      P+ V++ TL++GY +  DL+E 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEG 190

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            RL+  M A GV P V TY+ ++  LCKE ++ DAN L +EM +  + P+ VT  TLI+ 
Sbjct: 191 FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDG 250

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +CK G    AM++  +ML   L  D  TY  LI+G CK  ++  A++L+  M   G  P 
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPD 310

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ L+DG C + + E   +   + +   + +D   Y ALI   C++ +   A+++  
Sbjct: 311 KITYTTLIDGNCKEGDLETAFEYRKKMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLR 370

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
            M   G+  +   YT +   + + G+    S +L +M R   M
Sbjct: 371 EMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYM 413



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 95/344 (27%), Positives = 157/344 (45%), Gaps = 45/344 (13%)

Query: 232 RADLFTYNTLIALYCKKGMHYEALA-VQDRMEREGISP-----------------DIVTY 273
           R +L +Y T+I   C   M  EA   +Q  + R+G                    DI  +
Sbjct: 10  RHNLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVF 69

Query: 274 NSLIHGFCREGRMREARRLFRDIKGATPNH---VTYTTLIDGYCRANDLEEALRLREVMA 330
           + LI  +   G +R+A   +R     T  H   V + T     CR   LE  ++L+    
Sbjct: 70  SGLITAYLESGFLRDAIECYR----LTKEHKFRVPFDT-----CRKV-LEHLMKLKYFKL 119

Query: 331 AKGVY---------PGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
             G Y           +  +N ++    KEG IR A  + + + +  + P  V+ NTL+N
Sbjct: 120 VWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMN 179

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
            Y K+GD     ++KN M  +G+  D +TY  LI+G CK  +MD A EL   MLD G  P
Sbjct: 180 GYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVP 239

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
           +  +++ L+DG+C     +  +++  + +S+ L  D+  Y  LI   CKK  +  AQ L 
Sbjct: 240 NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLI 299

Query: 502 NLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
           + M   G+  D + YT+L     + G+ +   +     YR++++
Sbjct: 300 DEMSMKGLKPDKITYTTLIDGNCKEGDLETAFE-----YRKKMI 338



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 87/316 (27%), Positives = 150/316 (47%), Gaps = 27/316 (8%)

Query: 66  WAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKI---ALR-DFLSTPSVLNALVK 121
           + ES    Y  SL     ++H   K    + AQ++ + I   +LR   +S  +++N  +K
Sbjct: 124 YEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIK 183

Query: 122 IHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLT 181
           + D                       +G ++ + M+   + P ++  +VL+N L K+   
Sbjct: 184 LGD---------------------LDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKM 222

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
           D   +++ +M+  G+V N   +  LI   CK+  VD   ++  +M  + +  DL TYNTL
Sbjct: 223 DDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTL 282

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGA 299
           I   CKKG   +A  + D M  +G+ PD +TY +LI G C+EG +  A    + +  +  
Sbjct: 283 IYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKKMIKENI 342

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
             + V YT LI G C+     +A ++   M + G+ P + TY  I+ + CK+G +   ++
Sbjct: 343 RLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSK 402

Query: 360 LLNEMNEKKIAPDNVT 375
           LL EM      P  VT
Sbjct: 403 LLKEMQRDGYMPSVVT 418


>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
          Length = 1060

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 154/516 (29%), Positives = 239/516 (46%), Gaps = 59/516 (11%)

Query: 79  QSHWTMIHILTKNKHFKSAQNMLEKIAL-----RDFLSTPSVLNALVKIHDDPDGNSHVL 133
           Q +  +IH+LT  K +  A+ ++  +       R      SV N L ++ +      +V 
Sbjct: 71  QLYSAIIHVLTGAKLYAKARCLMRDLIQCLQKSRRSRICCSVFNVLSRL-ESSKFTPNVF 129

Query: 134 SWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQ 193
             L+I ++ + + ++ L V+ +M V   +P + AC ++L+ L K    D +WKVY  MV 
Sbjct: 130 GVLIIAFSEMGLVEEALWVYYKMDV---LPAMQACNMVLDGLVKKGRFDTMWKVYGDMVA 186

Query: 194 LGVVANIHLYNVLIHACCKSSDVDKVEKLLCEM--------------------------- 226
            G   N+  Y  LI  CC+  D  K  +L  EM                           
Sbjct: 187 RGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISE 246

Query: 227 ---EFKDVR-----ADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIH 278
               F+ +R      +L+TYNT++  YCK     +AL +   M  +G+ P++VT+  LI 
Sbjct: 247 AESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILID 306

Query: 279 GFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYP 336
           G C+   M  AR+   D+   G  PN   Y  LIDGYC+A +L EAL L   +    + P
Sbjct: 307 GLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILP 366

Query: 337 GVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVK 396
            V TY+ +++ LC   R+ +A+ LL EM +K   P+ VT NTLI+ YCK G+   A++V 
Sbjct: 367 DVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVC 426

Query: 397 NRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNK 456
           ++M E G+  +  T+  LI G+CKA +M+ A  L   M+  G  P   +Y+ L+DG+   
Sbjct: 427 SQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKD 486

Query: 457 NNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILG----- 511
            N +   +L  E    GL  +V     LI   CK  ++  A +LF    G    G     
Sbjct: 487 GNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNE 546

Query: 512 --------DSVIYTSLAYAYWRAGEPKACSDILDDM 539
                   + V+YT+L       G     S    DM
Sbjct: 547 LDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDM 582



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 105/345 (30%), Positives = 171/345 (49%), Gaps = 7/345 (2%)

Query: 238 YNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI- 296
           +  LI  + + G+  EAL V  +M+   + P +   N ++ G  ++GR     +++ D+ 
Sbjct: 129 FGVLIIAFSEMGLVEEALWVYYKMD---VLPAMQACNMVLDGLVKKGRFDTMWKVYGDMV 185

Query: 297 -KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIR 355
            +GA+PN VTY TLIDG CR  D  +A RL + M  K ++P VV Y  ++R LC E RI 
Sbjct: 186 ARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRIS 245

Query: 356 DANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALI 415
           +A  +   M    + P+  T NT+++ YCKI     A+++   ML  GL+ +  T+  LI
Sbjct: 246 EAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILI 305

Query: 416 HGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLC 475
            G CK  EM  A++ L  M   G  P+   Y+ L+DGYC   N    L L  E     + 
Sbjct: 306 DGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEIL 365

Query: 476 VDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDI 535
            DV  Y  LI+  C  ++++ A  L   M+  G L ++V Y +L   Y + G  +   ++
Sbjct: 366 PDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEV 425

Query: 536 LDDMYRRRLMITLKIYRSFSASYAKDN--EILDLFWSHVVDRGLM 578
              M  + +   +  + +    Y K    E     ++ +V +GL+
Sbjct: 426 CSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLL 470



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 107/364 (29%), Positives = 179/364 (49%), Gaps = 15/364 (4%)

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
           Y  +   +  L+++ +M    L+P++    +L++ L K        K    M   GVV N
Sbjct: 273 YCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPN 332

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
           I +YN LI   CK+ ++ +   L  E+E  ++  D+FTY+ LI   C      EA  +  
Sbjct: 333 IFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQ 392

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRAN 317
            M+++G  P+ VTYN+LI G+C+EG M +A  +   +  KG  PN +T++TLIDGYC+A 
Sbjct: 393 EMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAG 452

Query: 318 DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCN 377
            +E A+ L   M  KG+ P VV Y +++    K+G  ++A RL  EM E  + P+  T +
Sbjct: 453 KMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLS 512

Query: 378 TLINAYCKIGDTASAMKV-------------KNRMLEAGLMLDQFTYKALIHGFCKAKEM 424
            LI+  CK G  + A+K+              N +  +    +   Y ALI G C    +
Sbjct: 513 CLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRI 572

Query: 425 DIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRAL 484
             A +    M  +G  P   +   ++ G+    +   ++ L  + +  G+  + SVYR L
Sbjct: 573 FKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVL 632

Query: 485 IRRF 488
            + +
Sbjct: 633 AKGY 636



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 118/261 (45%), Gaps = 17/261 (6%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           DGL    +M+    +P+      L++   K+   +   +V  +M + G+  NI  ++ LI
Sbjct: 388 DGL--LQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLI 445

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
              CK+  ++    L  EM  K +  D+  Y  LI  + K G   EA  +   M+  G+ 
Sbjct: 446 DGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLH 505

Query: 268 PDIVTYNSLIHGFCREGRMREARRLF-----RDIKGA----------TPNHVTYTTLIDG 312
           P++ T + LI G C++GR+ +A +LF      D  G+          +PNHV YT LI G
Sbjct: 506 PNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQG 565

Query: 313 YCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPD 372
            C    + +A +    M   G+ P V T   I++   +   +RD   L  ++ +  I P+
Sbjct: 566 LCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPN 625

Query: 373 NVTCNTLINAYCKIGDTASAM 393
           +     L   Y + G   SA+
Sbjct: 626 SSVYRVLAKGYEESGYLKSAL 646



 Score = 52.4 bits (124), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 65/279 (23%), Positives = 119/279 (42%), Gaps = 39/279 (13%)

Query: 150  LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
            LQ+F QM++ +  P +   TV L++ A     DM   ++  +   G+  ++ L N LI+ 
Sbjct: 734  LQLFRQMQMDDXQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLINM 793

Query: 210  CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRM-------- 261
              K  ++    +L    + KDV     T+ ++I  +   G   EAL +   M        
Sbjct: 794  YSKCGEIGTARRLFDGTQKKDVT----TWTSMIVGHALHGQAEEALQLFTEMKETNKRAR 849

Query: 262  --EREG------ISPDIVTYNSLIHGFCREGRMREARRLFRDIK---GATPNHVTYTTLI 310
              +R G      + P+ VT+  ++      G + E ++ FR +K      P    +  ++
Sbjct: 850  KNKRNGEXESSLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRISHFGCMV 909

Query: 311  DGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDAN-------RLLNE 363
            D  CRA  L EA    E +    V P  V + ++L     +G   D+N       ++ +E
Sbjct: 910  DLLCRAGLLTEAY---EFILKMPVRPNAVVWRTLLGACSLQG---DSNGNGNSNIKIXSE 963

Query: 364  MNEK--KIAPDNVTCNTLI-NAYCKIGDTASAMKVKNRM 399
               +  ++ P +V  N ++ N Y   G     M V+N++
Sbjct: 964  ARRQLLELEPSHVGDNVIMSNLYAAKGMWDKKMLVRNQI 1002



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 50/231 (21%), Positives = 97/231 (41%), Gaps = 26/231 (11%)

Query: 178 DRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFT 237
           D+  +   +++++M       +I    V + AC     +D  E +   +  + +  DL  
Sbjct: 727 DQRPNKALQLFRQMQMDDXQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCL 786

Query: 238 YNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK 297
            N+LI +Y K G    A  + D  +++    D+ T+ S+I G    G+  EA +LF ++K
Sbjct: 787 NNSLINMYSKCGEIGTARRLFDGTQKK----DVTTWTSMIVGHALHGQAEEALQLFTEMK 842

Query: 298 GAT------------------PNHVTYTTLIDGYCRANDLEEALR-LREVMAAKGVYPGV 338
                                PN VT+  ++     A  +EE  +  R +     + P +
Sbjct: 843 ETNKRARKNKRNGEXESSLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRI 902

Query: 339 VTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
             +  ++  LC+ G + +A   + +M    + P+ V   TL+ A    GD+
Sbjct: 903 SHFGCMVDLLCRAGLLTEAYEFILKM---PVRPNAVVWRTLLGACSLQGDS 950


>gi|410109893|gb|AFV61026.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           fucata]
          Length = 414

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 122/412 (29%), Positives = 220/412 (53%), Gaps = 3/412 (0%)

Query: 77  SLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS-VLNALVKIHDDPDGNSHVLSW 135
           +L S+ TMIH L  ++    A+++++ +  R    + S V  A+ +       + +V S 
Sbjct: 1   TLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAIFETKGTQRSDLYVFSG 60

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           L+  Y      +D ++ +   R H        C  +L  L K +   +VW  Y+++++ G
Sbjct: 61  LITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECG 120

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
             A+++ +N+L+H  CK  D+   + +   +    +R  + +YNTL+  Y + G   E  
Sbjct: 121 YPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 180

Query: 256 AVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGY 313
            ++  M   G+ PD+ TY+ LI+G C+E ++ +A  LF +  +KG  PN VT+TTLIDG+
Sbjct: 181 RLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDGH 240

Query: 314 CRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDN 373
           C+   ++ A+ + + M ++ + P ++TYN+++  LCK+G ++ A+ L++EM+ K + PD 
Sbjct: 241 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDK 300

Query: 374 VTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFG 433
           +T  TLI+  CK GD  +A + + RM++    LD   Y ALI G C+      A+++L  
Sbjct: 301 ITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGXSVDAEKMLRE 360

Query: 434 MLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
           ML  G  P   +Y+ +++ +C K +     KLL E    G    V  Y  L+
Sbjct: 361 MLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLM 412



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 95/279 (34%), Positives = 147/279 (52%), Gaps = 2/279 (0%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           G    +  +N L+H FC++G +R A+ +F  I   G  P+ V+Y TL++GY R  DL+E 
Sbjct: 120 GYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEG 179

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            RL+  M A GV P V TY+ ++  LCKE +I DAN L +EM  K + P++VT  TLI+ 
Sbjct: 180 FRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDG 239

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +CK G    AM++  +ML   L  D  TY  LI+G CK  ++  A  L+  M   G  P 
Sbjct: 240 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPD 299

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ L+DG C   + +   +     +     +D  VY ALI   C++     A+++  
Sbjct: 300 KITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGXSVDAEKMLR 359

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
            M   G+  D+  YT +   + + G+    S +L +M R
Sbjct: 360 EMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQR 398



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 84/312 (26%), Positives = 145/312 (46%), Gaps = 34/312 (10%)

Query: 235 LFTYNTLIALYCKKGMHYEALA-VQDRMEREGISP-----------------DIVTYNSL 276
           L +Y T+I   C   M  EA + +Q  + R+G                    D+  ++ L
Sbjct: 2   LHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAIFETKGTQRSDLYVFSGL 61

Query: 277 IHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYP 336
           I  +   G +R+A   +R     T  H  +       CR   LE  ++L+      G Y 
Sbjct: 62  ITAYLESGFLRDAIECYR----LTREHKFWVPF--DTCRKV-LEHLMKLKYFKLVWGFYE 114

Query: 337 GVVT---------YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
            ++          +N ++ + CK+G IR A  + + + +  + P  V+ NTL+N Y ++G
Sbjct: 115 EILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRLG 174

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
           D     ++K+ ML +G+  D +TY  LI+G CK  ++D A EL   ML  G  P+  +++
Sbjct: 175 DLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFT 234

Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGN 507
            L+DG+C     +  +++  + +S+ L  D+  Y  LI   CKK  +  A  L + M   
Sbjct: 235 TLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMK 294

Query: 508 GILGDSVIYTSL 519
           G+  D + YT+L
Sbjct: 295 GLKPDKITYTTL 306



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 64/129 (49%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
            + D+M +  L P     T L++   KD   D  ++  K+M+Q     +  +Y  LI   
Sbjct: 286 HLIDEMSMKGLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGL 345

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           C+       EK+L EM    ++ D  TY  +I  +CKKG  ++   +   M+R+G  P +
Sbjct: 346 CREGXSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSV 405

Query: 271 VTYNSLIHG 279
           VTYN L++G
Sbjct: 406 VTYNVLMNG 414


>gi|255660822|gb|ACU25580.1| pentatricopeptide repeat-containing protein [Mulguraea scoparia]
          Length = 418

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 118/409 (28%), Positives = 219/409 (53%), Gaps = 3/409 (0%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS-VLNALVKIHDDPDGNSH 131
            ++H+LQS+ TMIH L  ++    A+ +++ +  R    + S V  A+++       + +
Sbjct: 8   TFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIY 67

Query: 132 VLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKM 191
           V S L+  Y      +D ++ +   + H        C  ++  L K +   +VW  Y++ 
Sbjct: 68  VFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWGFYEES 127

Query: 192 VQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMH 251
           ++ G  A+++ +N+L+H  CK  ++   + +   +    +R  + ++NTL+  Y K G  
Sbjct: 128 LECGYPASLYFFNILMHNFCKGGEIXLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDL 187

Query: 252 YEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTL 309
            E   ++  M+  G+ PD+ TY+ LI+G C+E +M +A  LF ++   G  PN VT+TTL
Sbjct: 188 DEGFRLKSVMQASGVQPDVYTYSVLINGLCKESKMDDANALFDEMLDNGLVPNGVTFTTL 247

Query: 310 IDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI 369
           IDG+C+   ++ A+ +   M ++ + P ++TYN+++  LCK+G ++ A  L++EM+ K +
Sbjct: 248 IDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGL 307

Query: 370 APDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKE 429
            PD +T  TLI+  CK GD  +A + + RM++  + LD   Y ALI   C+      A++
Sbjct: 308 KPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISXLCQEGRSVDAEK 367

Query: 430 LLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDV 478
           +L  ML  G  P   +Y+ +++ +C K +     KLL E    G   +V
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYLPNV 416



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 90/279 (32%), Positives = 149/279 (53%), Gaps = 2/279 (0%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           G    +  +N L+H FC+ G +  A+ +F  I   G  P+ V++ TL++GY +  DL+E 
Sbjct: 131 GYPASLYFFNILMHNFCKGGEIXLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEG 190

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            RL+ VM A GV P V TY+ ++  LCKE ++ DAN L +EM +  + P+ VT  TLI+ 
Sbjct: 191 FRLKSVMQASGVQPDVYTYSVLINGLCKESKMDDANALFDEMLDNGLVPNGVTFTTLIDG 250

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +CK G    AM++  +ML   L+ D  TY  LI+G CK  ++  A++L+  M   G  P 
Sbjct: 251 HCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPD 310

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ L+DG C + + E   +     +   + +D   Y ALI   C++ +   A+++  
Sbjct: 311 KITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISXLCQEGRSVDAEKMLR 370

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
            M   G+  +   YT +   + + G+    S +L +M R
Sbjct: 371 EMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQR 409



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 79/261 (30%), Positives = 128/261 (49%), Gaps = 37/261 (14%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           VFD +    L P + +   L+N   K    D  +++   M   GV  +++ Y+VLI+  C
Sbjct: 158 VFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEGFRLKSVMQASGVQPDVYTYSVLINGLC 217

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           K S +D    L  EM    +  +  T+ TLI  +CK G    A+ +  +M  + + PD++
Sbjct: 218 KESKMDDANALFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLI 277

Query: 272 TYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLE--------- 320
           TYN+LI+G C++G +++A+ L  ++  KG  P+ +TYTTLIDG C+  DLE         
Sbjct: 278 TYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRM 337

Query: 321 --EALRLREV------------------------MAAKGVYPGVVTYNSILRKLCKEGRI 354
             E +RL +V                        M + G+ P + TY  I+ + CK+G +
Sbjct: 338 IKENIRLDDVAYTALISXLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDV 397

Query: 355 RDANRLLNEMNEKKIAPDNVT 375
              ++LL EM      P+ VT
Sbjct: 398 WTGSKLLKEMQRDGYLPNVVT 418



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 93/344 (27%), Positives = 154/344 (44%), Gaps = 45/344 (13%)

Query: 232 RADLFTYNTLIALYCKKGMHYEALA-VQDRMEREGISP-----------------DIVTY 273
           R  L +Y T+I   C   M  EA   +Q  + R+G                    DI  +
Sbjct: 10  RHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVF 69

Query: 274 NSLIHGFCREGRMREARRLFRDIKGATPNH---VTYTTLIDGYCRANDLEEALRLREVMA 330
           + LI  +   G +R+A   +R     T  H   V + T     CR   +E  ++L+    
Sbjct: 70  SGLITAYLESGFLRDAIECYR----LTKEHKFRVPFDT-----CRKV-IEHLMKLKYFKL 119

Query: 331 AKGVY---------PGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
             G Y           +  +N ++   CK G I  A  + + + +  + P  V+ NTL+N
Sbjct: 120 VWGFYEESLECGYPASLYFFNILMHNFCKGGEIXLAQSVFDSITKWGLRPSVVSFNTLMN 179

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
            Y KIGD     ++K+ M  +G+  D +TY  LI+G CK  +MD A  L   MLD G  P
Sbjct: 180 GYIKIGDLDEGFRLKSVMQASGVQPDVYTYSVLINGLCKESKMDDANALFDEMLDNGLVP 239

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
           +  +++ L+DG+C     +  +++  + +S+ L  D+  Y  LI   CKK  +  AQ L 
Sbjct: 240 NGVTFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAQDLI 299

Query: 502 NLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
           + M   G+  D + YT+L     + G+ +   +     YR+R++
Sbjct: 300 DEMSMKGLKPDKITYTTLIDGNCKEGDLETAFE-----YRKRMI 338



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 73/282 (25%), Positives = 122/282 (43%), Gaps = 12/282 (4%)

Query: 306 YTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMN 365
           +  L+  +C+  ++  A  + + +   G+ P VV++N+++    K G + +  RL + M 
Sbjct: 139 FNILMHNFCKGGEIXLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEGFRLKSVMQ 198

Query: 366 EKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMD 425
              + PD  T + LIN  CK      A  + + ML+ GL+ +  T+  LI G CK   +D
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANALFDEMLDNGLVPNGVTFTTLIDGHCKNGRVD 258

Query: 426 IAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
           +A E+   ML     P   +Y+ L+ G C K + +    L+DE   +GL  D   Y  LI
Sbjct: 259 LAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLI 318

Query: 486 RRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
              CK+  ++ A      M    I  D V YT+L     + G       +L +M    L 
Sbjct: 319 DGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISXLCQEGRSVDAEKMLREMLSVGLK 378

Query: 546 ITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKEMQ 587
             +  Y      + K  ++    W+           + KEMQ
Sbjct: 379 PEIGTYTMIINEFCKKGDV----WT--------GSKLLKEMQ 408



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 64/132 (48%), Gaps = 3/132 (2%)

Query: 141 ANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANI 200
            +LK  QD   + D+M +  L P     T L++   K+   +  ++  K+M++  +  + 
Sbjct: 290 GDLKQAQD---LIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDD 346

Query: 201 HLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDR 260
             Y  LI   C+       EK+L EM    ++ ++ TY  +I  +CKKG  +    +   
Sbjct: 347 VAYTALISXLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKE 406

Query: 261 MEREGISPDIVT 272
           M+R+G  P++VT
Sbjct: 407 MQRDGYLPNVVT 418


>gi|255660800|gb|ACU25569.1| pentatricopeptide repeat-containing protein [Verbena rigida]
          Length = 418

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 119/404 (29%), Positives = 219/404 (54%), Gaps = 3/404 (0%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS-VLNALVKIHDDPDGNSH 131
            ++H+LQS+ TMIH L  ++    A+ +++ +  R    + S V  A+++       + +
Sbjct: 8   TFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIY 67

Query: 132 VLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKM 191
           V S L+  Y      +D ++ +   + H        C  +L  L K +   +VW  Y++ 
Sbjct: 68  VFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEEN 127

Query: 192 VQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMH 251
           ++ G  A+++ +N+L+H+  K  ++   + +   +    +R  + ++NTL+  Y K G  
Sbjct: 128 LECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDL 187

Query: 252 YEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTL 309
            E   +++ M+  G+ PD+ TY+ LI+G C+E +M +A  LF ++  KG  PN VT+TTL
Sbjct: 188 NEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTL 247

Query: 310 IDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI 369
           IDG+C+   ++ A+ + + M ++ + P ++TYN+++  LCK+G ++ A  L++EM  K +
Sbjct: 248 IDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGL 307

Query: 370 APDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKE 429
            PD  T  TLI+  CK GD  +A + + RM++  + LD   Y ALI G C+      A++
Sbjct: 308 KPDKFTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEK 367

Query: 430 LLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
           +L  ML  G  P   +Y+ +++ +C K +     KLL E    G
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEFCKKGDVWXGSKLLKEMQRDG 411



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 91/279 (32%), Positives = 149/279 (53%), Gaps = 2/279 (0%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           G    +  +N L+H F +EG +R A+ +F  I   G  P+ V++ TL++GY +  DL E 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEG 190

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            RL+  M A GV P V TY+ ++  LCKE ++ DAN L +EM +K + P+ VT  TLI+ 
Sbjct: 191 FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDG 250

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +CK G    AM++  +ML   L  D  TY  LI+G CK  ++  A++L+  M+  G  P 
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPD 310

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ L+DG C + + E   +     +   + +D   Y ALI   C++ +   A+++  
Sbjct: 311 KFTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLR 370

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
            M   G+  +   YT +   + + G+    S +L +M R
Sbjct: 371 EMLSVGLKPEIGTYTMIINEFCKKGDVWXGSKLLKEMQR 409



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 87/318 (27%), Positives = 149/318 (46%), Gaps = 31/318 (9%)

Query: 66  WAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKI---ALR-DFLSTPSVLNALVK 121
           + E+    Y  SL     ++H   K    + AQ++ + I    LR   +S  +++N  +K
Sbjct: 124 YEENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIK 183

Query: 122 IHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLT 181
           + D                       +G ++ + M+   + P ++  +VL+N L K+   
Sbjct: 184 LGD---------------------LNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKM 222

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
           D    ++ +M+  G+V N   +  LI   CK+  VD   ++  +M  + +  DL TYNTL
Sbjct: 223 DDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTL 282

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA----RRLFRDIK 297
           I   CKKG   +A  + D M  +G+ PD  TY +LI G C+EG +  A    +R+ ++  
Sbjct: 283 IYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLIDGNCKEGDLETAFEYRKRMIKE-- 340

Query: 298 GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDA 357
               + V YT LI G C+     +A ++   M + G+ P + TY  I+ + CK+G +   
Sbjct: 341 NIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWXG 400

Query: 358 NRLLNEMNEKKIAPDNVT 375
           ++LL EM      P  VT
Sbjct: 401 SKLLKEMQRDGYKPSVVT 418



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/344 (27%), Positives = 154/344 (44%), Gaps = 45/344 (13%)

Query: 232 RADLFTYNTLIALYCKKGMHYEALA-VQDRMEREGISP-----------------DIVTY 273
           R  L +Y T+I   C   M  EA   +Q  + R+G                    DI  +
Sbjct: 10  RHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVF 69

Query: 274 NSLIHGFCREGRMREARRLFRDIKGATPNH---VTYTTLIDGYCRANDLEEALRLREVMA 330
           + LI  +   G +R+A   +R     T  H   V + T     CR   LE  ++L+    
Sbjct: 70  SGLITAYLESGFLRDAIECYR----LTKEHKFRVPFDT-----CRKV-LEHLMKLKYFKL 119

Query: 331 AKGVY---------PGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
             G Y           +  +N ++    KEG IR A  + + + +  + P  V+ NTL+N
Sbjct: 120 VWGFYEENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMN 179

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
            Y K+GD     ++KN M  +G+  D +TY  LI+G CK  +MD A  L   MLD G  P
Sbjct: 180 GYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVP 239

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
           +  +++ L+DG+C     +  +++  + +S+ L  D+  Y  LI   CKK  +  AQ L 
Sbjct: 240 NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLI 299

Query: 502 NLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
           + M   G+  D   YT+L     + G+ +   +     YR+R++
Sbjct: 300 DEMIMKGLKPDKFTYTTLIDGNCKEGDLETAFE-----YRKRMI 338


>gi|255660782|gb|ACU25560.1| pentatricopeptide repeat-containing protein [Verbena halei]
          Length = 418

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 117/404 (28%), Positives = 220/404 (54%), Gaps = 3/404 (0%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS-VLNALVKIHDDPDGNSH 131
            ++H+LQS+ TMIH L  ++    A+ +++ +  R    + S V  A+++       + +
Sbjct: 8   TFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIY 67

Query: 132 VLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKM 191
           V S L+  Y      +D ++ +  ++ H        C  +L  L K +   +VW  Y++ 
Sbjct: 68  VFSGLITAYLESGFLRDAIECYRLIKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEES 127

Query: 192 VQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMH 251
           ++ G  A+++ +N+L+H+  K  ++   + +   +    +R  + ++NTL+  Y K G  
Sbjct: 128 LECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDL 187

Query: 252 YEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTL 309
            E   +++ M+  G+  D+ TY+ LI+G C+  +M +A  LF ++   G  PN VT+TTL
Sbjct: 188 DEGFRLKNAMQASGVQSDVYTYSVLINGLCKASKMDDANELFDEMLDNGLVPNGVTFTTL 247

Query: 310 IDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI 369
           IDG+C+   ++ A+ + + M ++ + P ++TYN+++  LCK+G ++ A  L++EM+ K +
Sbjct: 248 IDGHCKNRRVDVAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGL 307

Query: 370 APDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKE 429
            PD +T  TLI+  CK GD  +A + + RM++  + LD   Y ALI G C+      A++
Sbjct: 308 KPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEK 367

Query: 430 LLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
           +L  ML  G  P   +Y+ +++ +C K +    LKLL E    G
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEFCEKGDVWTGLKLLKEMQRDG 411



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 86/283 (30%), Positives = 143/283 (50%), Gaps = 2/283 (0%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           G    +  +N L+H F +EG +R A+ +F  I      P+ V++ TL++GY +  DL+E 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEG 190

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            RL+  M A GV   V TY+ ++  LCK  ++ DAN L +EM +  + P+ VT  TLI+ 
Sbjct: 191 FRLKNAMQASGVQSDVYTYSVLINGLCKASKMDDANELFDEMLDNGLVPNGVTFTTLIDG 250

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +CK      AM++  +ML   L  D  TY  LI+G CK  ++  A++L+  M   G  P 
Sbjct: 251 HCKNRRVDVAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPD 310

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ L+DG C + + E   +     +   + +D   Y ALI   C++ +   A+++  
Sbjct: 311 KITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLR 370

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
            M   G+  +   YT +   +   G+      +L +M R   M
Sbjct: 371 EMLSVGLKPEIGTYTMIINEFCEKGDVWTGLKLLKEMQRDGYM 413



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 97/341 (28%), Positives = 157/341 (46%), Gaps = 39/341 (11%)

Query: 232 RADLFTYNTLIALYCKKGMHYEALA-VQDRMEREGISP-----------------DIVTY 273
           R  L +Y T+I   C   M  EA   +Q  + R+G                    DI  +
Sbjct: 10  RHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVF 69

Query: 274 NSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKG 333
           + LI  +   G +R+A   +R IK      V + T     CR   LE  ++L+      G
Sbjct: 70  SGLITAYLESGFLRDAIECYRLIK-EHKFRVPFDT-----CRKV-LEHLMKLKYFKLVWG 122

Query: 334 VY---------PGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
            Y           +  +N ++    KEG IR A  + + + +  + P  V+ NTL+N Y 
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYI 182

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           K+GD     ++KN M  +G+  D +TY  LI+G CKA +MD A EL   MLD G  P+  
Sbjct: 183 KLGDLDEGFRLKNAMQASGVQSDVYTYSVLINGLCKASKMDDANELFDEMLDNGLVPNGV 242

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
           +++ L+DG+C     +  +++  + +S+ L  D+  Y  LI   CKK  +  AQ L + M
Sbjct: 243 TFTTLIDGHCKNRRVDVAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302

Query: 505 QGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
              G+  D + YT+L     + G+ +   +     YR+R++
Sbjct: 303 SMKGLKPDKITYTTLIDGNCKEGDLETAFE-----YRKRMI 338



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 86/318 (27%), Positives = 149/318 (46%), Gaps = 31/318 (9%)

Query: 66  WAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKI---ALR-DFLSTPSVLNALVK 121
           + ES    Y  SL     ++H   K    + AQ++ + I   +LR   +S  +++N  +K
Sbjct: 124 YEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIK 183

Query: 122 IHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLT 181
           + D                       +G ++ + M+   +   ++  +VL+N L K    
Sbjct: 184 LGD---------------------LDEGFRLKNAMQASGVQSDVYTYSVLINGLCKASKM 222

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
           D   +++ +M+  G+V N   +  LI   CK+  VD   ++  +M  + +  DL TYNTL
Sbjct: 223 DDANELFDEMLDNGLVPNGVTFTTLIDGHCKNRRVDVAMEIYKQMLSQSLSPDLITYNTL 282

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA----RRLFRDIK 297
           I   CKKG   +A  + D M  +G+ PD +TY +LI G C+EG +  A    +R+ ++  
Sbjct: 283 IYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKE-- 340

Query: 298 GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDA 357
               + V YT LI G C+     +A ++   M + G+ P + TY  I+ + C++G +   
Sbjct: 341 NIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCEKGDVWTG 400

Query: 358 NRLLNEMNEKKIAPDNVT 375
            +LL EM      P  VT
Sbjct: 401 LKLLKEMQRDGYMPSVVT 418


>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic [Vitis vinifera]
          Length = 772

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 129/402 (32%), Positives = 203/402 (50%), Gaps = 2/402 (0%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           + ++M  + L P     T L+    ++   +   ++ ++MV  G  ++    NVL+H  C
Sbjct: 233 MMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYC 292

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           K   +++V   + EM  +  R D FT+N+L+   C+ G    AL + D M +EG  PDI 
Sbjct: 293 KEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIF 352

Query: 272 TYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           TYNSLI G C+ G + EA  +     ++  +PN VTY TLI   C+ N +EEA  L  V+
Sbjct: 353 TYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVL 412

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
            +KG+ P V T+NS+++ LC     R A  L  EM  K   PD  T N LI++ C  G  
Sbjct: 413 TSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRL 472

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
             A+ +   M  +G   +  TY  LI GFCK K ++ A+E+   M   G S +  +Y+ L
Sbjct: 473 EEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTL 532

Query: 450 VDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGI 509
           +DG C     E   +L+D+ +  GL  D   Y +L+  FC+   +  A  +   M  NG 
Sbjct: 533 IDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGC 592

Query: 510 LGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIY 551
             DSV Y +L     +AG  +  S +L  +  + +++  + Y
Sbjct: 593 EPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTY 634



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 137/503 (27%), Positives = 235/503 (46%), Gaps = 23/503 (4%)

Query: 66  WAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDD 125
           WA S  PN+  S   +  ++  L K+  F S + +L+++                  H  
Sbjct: 94  WA-SKQPNFVPSSVIYEEVLRKLGKDGSFGSMRRVLQEMK-----------------HTG 135

Query: 126 PDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACT--VLLNSLAKDRLTDM 183
            +        L+  YA  ++  + + V D M        L A T   LLN L       +
Sbjct: 136 CEIRRGTFLILIESYAKFELFDEAVAVVDIME-EEFGLKLDAFTYNFLLNVLVDGNKLKL 194

Query: 184 VWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIA 243
           V  V  +MV  G+  ++  +N+LI A C++  +     ++ EM    +  D  T+ TL+ 
Sbjct: 195 VEIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQ 254

Query: 244 LYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATP 301
            + ++G    AL ++++M   G     VT N L+HG+C+EGR+ E      ++  +G  P
Sbjct: 255 GFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRP 314

Query: 302 NHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLL 361
           +  T+ +L++G CR   ++ AL + +VM  +G  P + TYNS++  LCK G + +A  +L
Sbjct: 315 DRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEIL 374

Query: 362 NEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKA 421
           N+M  +  +P+ VT NTLI+  CK      A ++   +   G++ D  T+ +LI G C  
Sbjct: 375 NQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLT 434

Query: 422 KEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVY 481
               +A EL   M   G  P   +Y+ L+D  C++   E  L LL E  S G   +V  Y
Sbjct: 435 NNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTY 494

Query: 482 RALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
             LI  FCK ++++ A+ +F+ M+  GI  + V Y +L     +    +  + ++D M  
Sbjct: 495 NTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLM 554

Query: 542 RRLMITLKIYRSFSASYAKDNEI 564
             L      Y S    + +  +I
Sbjct: 555 EGLKPDKFTYNSLLTYFCRAGDI 577



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 127/406 (31%), Positives = 194/406 (47%), Gaps = 3/406 (0%)

Query: 126 PDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVW 185
           P  N  V + LV  Y      ++ L   D+M      P       L+N L +        
Sbjct: 278 PSSNVTV-NVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHAL 336

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
           ++   M+Q G   +I  YN LI   CK  +V++  ++L +M  +D   +  TYNTLI+  
Sbjct: 337 EILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTL 396

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNH 303
           CK+    EA  +   +  +GI PD+ T+NSLI G C     R A  LF ++K  G  P+ 
Sbjct: 397 CKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDE 456

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
            TY  LID  C    LEEAL L + M + G    VVTYN+++   CK  RI +A  + +E
Sbjct: 457 FTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDE 516

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
           M  + I+ + VT NTLI+  CK      A ++ ++ML  GL  D+FTY +L+  FC+A +
Sbjct: 517 MELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGD 576

Query: 424 MDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRA 483
           +  A +++  M   G  P   +Y  L+ G       E   +LL     +G+ +    Y  
Sbjct: 577 IKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNP 636

Query: 484 LIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEP 529
           +I+   ++++   A RLF  M   G   D+V Y  +       G P
Sbjct: 637 VIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGGGP 682



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 120/421 (28%), Positives = 202/421 (47%), Gaps = 42/421 (9%)

Query: 115 VLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNS 174
           +L+ +++   DPD  ++  + L+     L   ++ +++ +QM + +  P+      L+++
Sbjct: 338 ILDVMLQEGFDPDIFTY--NSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLIST 395

Query: 175 LAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRAD 234
           L K+   +   ++ + +   G++ ++  +N LI   C +++     +L  EM+ K    D
Sbjct: 396 LCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPD 455

Query: 235 LFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF- 293
            FTYN LI   C +G   EAL++   ME  G S ++VTYN+LI GFC+  R+ EA  +F 
Sbjct: 456 EFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFD 515

Query: 294 -RDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEG 352
             +++G + N VTY TLIDG C+   +EEA +L + M  +G+ P   TYNS+L   C+ G
Sbjct: 516 EMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAG 575

Query: 353 RIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG------------------------- 387
            I+ A  ++  M      PD+VT  TLI    K G                         
Sbjct: 576 DIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYN 635

Query: 388 ----------DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCK-AKEMDIAKELLFGMLD 436
                      T+ A+++   M+E G   D  TYK +  G C     +  A + L  M D
Sbjct: 636 PVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGGGPIGEAVDFLVEMTD 695

Query: 437 AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDY 496
            GF P + S+  L +G C  + E+ L+KL++  + +    D  V  ++I  F K  K   
Sbjct: 696 KGFLPDFSSFLMLAEGLCALSMEDTLIKLVNRVMKQANFSDSEV--SMIMGFLKIRKFQD 753

Query: 497 A 497
           A
Sbjct: 754 A 754



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/241 (24%), Positives = 104/241 (43%), Gaps = 2/241 (0%)

Query: 301 PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVY-PGVVTYNSILRKLCKEGRIRDANR 359
           P + T   L D   R +D +  L L +  + +  + P  V Y  +LRKL K+G      R
Sbjct: 67  PQNFTPKQLRDALRRQSDEDSILDLLDWASKQPNFVPSSVIYEEVLRKLGKDGSFGSMRR 126

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEA-GLMLDQFTYKALIHGF 418
           +L EM          T   LI +Y K      A+ V + M E  GL LD FTY  L++  
Sbjct: 127 VLQEMKHTGCEIRRGTFLILIESYAKFELFDEAVAVVDIMEEEFGLKLDAFTYNFLLNVL 186

Query: 419 CKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDV 478
               ++ + + +   M+  G  P   +++ L+   C  +     + +++E  S GL  D 
Sbjct: 187 VDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDE 246

Query: 479 SVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDD 538
             +  L++ F ++  ++ A R+   M   G    +V    L + Y + G  +     +D+
Sbjct: 247 KTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDE 306

Query: 539 M 539
           M
Sbjct: 307 M 307



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 69/293 (23%), Positives = 113/293 (38%), Gaps = 59/293 (20%)

Query: 80  SHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIF 139
           ++ T+I    KNK  + A+ + +++ L+         N L+      DG           
Sbjct: 493 TYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLI------DG----------- 535

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
               +  ++  Q+ DQM +  L P              D+ T                  
Sbjct: 536 LCKNRRVEEAAQLMDQMLMEGLKP--------------DKFT------------------ 563

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
              YN L+   C++ D+ K   ++  M       D  TY TLI    K G    A  +  
Sbjct: 564 ---YNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLR 620

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCR-A 316
            ++ +G+     TYN +I    RE R  EA RLFR++  KG  P+ VTY  +  G C   
Sbjct: 621 TVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGG 680

Query: 317 NDLEEALRLREVMAAKGVYPGVVTYNSILRKLC----KEGRIRDANRLLNEMN 365
             + EA+     M  KG  P   ++  +   LC    ++  I+  NR++ + N
Sbjct: 681 GPIGEAVDFLVEMTDKGFLPDFSSFLMLAEGLCALSMEDTLIKLVNRVMKQAN 733


>gi|255660810|gb|ACU25574.1| pentatricopeptide repeat-containing protein [Glandularia dissecta]
          Length = 418

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 118/409 (28%), Positives = 219/409 (53%), Gaps = 3/409 (0%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS-VLNALVKIHDDPDGNSH 131
            ++H+LQS+ TMIH L  ++    A+ +++ +  R    + S V  AJ++       + +
Sbjct: 8   TFRHTLQSYCTMIHFLCTHQMIPEAKXLIQIVVSRKGKGSASAVFAAJLETKGTQISDIY 67

Query: 132 VLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKM 191
           V S L+  Y      +D ++ +   + H        C  ++  L K +   +VW  Y++ 
Sbjct: 68  VFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWGFYEES 127

Query: 192 VQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMH 251
           ++ G  A+++ +N+L+H+  K  ++   + +   +    +R  + ++NTL+  Y K G  
Sbjct: 128 LECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDL 187

Query: 252 YEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTL 309
            E   +++ M+  G+ PD+ TY+ LI+G C+E +M +A  LF ++   G  PN VT+TTL
Sbjct: 188 DEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTL 247

Query: 310 IDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI 369
           IDG+C+   ++ A+ +   M ++ + P ++TYN+++  LCK+G ++ A  L +EM+ K +
Sbjct: 248 IDGHCKNGRVDLAMEIYXQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLXDEMSMKGL 307

Query: 370 APDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKE 429
            PD +T  TLI+  CK GD  +A + + RM++  + LD   Y ALI G C+      A++
Sbjct: 308 KPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDXVAYTALISGLCQEGRSVDAEK 367

Query: 430 LLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDV 478
           +L  ML  G  P   +Y+ +++ +C K +     KLL E    G    V
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSV 416



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 90/279 (32%), Positives = 147/279 (52%), Gaps = 2/279 (0%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           G    +  +N L+H F +EG +R A+ +F  I   G  P+ V++ TL++GY +  DL+E 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEG 190

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            RL+  M A GV P V TY+ ++  LCKE ++ DAN L +EM +  + P+ VT  TLI+ 
Sbjct: 191 FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDG 250

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +CK G    AM++  +ML   L  D  TY  LI+G CK  ++  A++L   M   G  P 
Sbjct: 251 HCKNGRVDLAMEIYXQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLXDEMSMKGLKPD 310

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ L+DG C + + E   +     +   + +D   Y ALI   C++ +   A+++  
Sbjct: 311 KITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDXVAYTALISGLCQEGRSVDAEKMLR 370

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
            M   G+  +   YT +   + + G+    S +L +M R
Sbjct: 371 EMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQR 409



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 90/317 (28%), Positives = 151/317 (47%), Gaps = 29/317 (9%)

Query: 66  WAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKI---ALRDFLSTPSVLNALVKI 122
           + ES    Y  SL     ++H   K    + AQ++ + I    LR     PSV++     
Sbjct: 124 YEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLR-----PSVVS----- 173

Query: 123 HDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTD 182
                      + L+  Y  L    +G ++ + M+   + P ++  +VL+N L K+   D
Sbjct: 174 ----------FNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMD 223

Query: 183 MVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLI 242
              +++ +M+  G+V N   +  LI   CK+  VD   ++  +M  + +  DL TYNTLI
Sbjct: 224 DANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYXQMLSQSLSPDLITYNTLI 283

Query: 243 ALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA----RRLFRDIKG 298
              CKKG   +A  + D M  +G+ PD +TY +LI G C+EG +  A    +R+ ++   
Sbjct: 284 YGLCKKGDLKQAQDLXDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKE--N 341

Query: 299 ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDAN 358
              + V YT LI G C+     +A ++   M + G+ P + TY  I+ + CK+G +   +
Sbjct: 342 IRLDXVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGS 401

Query: 359 RLLNEMNEKKIAPDNVT 375
           +LL EM      P  VT
Sbjct: 402 KLLKEMQRDGYVPSVVT 418



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 95/344 (27%), Positives = 156/344 (45%), Gaps = 45/344 (13%)

Query: 232 RADLFTYNTLIALYCKKGMHYEA-LAVQDRMEREGISP-----------------DIVTY 273
           R  L +Y T+I   C   M  EA   +Q  + R+G                    DI  +
Sbjct: 10  RHTLQSYCTMIHFLCTHQMIPEAKXLIQIVVSRKGKGSASAVFAAJLETKGTQISDIYVF 69

Query: 274 NSLIHGFCREGRMREARRLFRDIKGATPNH---VTYTTLIDGYCRANDLEEALRLREVMA 330
           + LI  +   G +R+A   +R     T  H   V + T     CR   +E  ++L+    
Sbjct: 70  SGLITAYLESGFLRDAIECYR----LTKEHKFRVPFDT-----CRKV-IEHLMKLKYFKL 119

Query: 331 AKGVY---------PGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
             G Y           +  +N ++    KEG IR A  + + + +  + P  V+ NTL+N
Sbjct: 120 VWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMN 179

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
            Y K+GD     ++KN M  +G+  D +TY  LI+G CK  +MD A EL   MLD G  P
Sbjct: 180 GYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVP 239

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
           +  +++ L+DG+C     +  +++  + +S+ L  D+  Y  LI   CKK  +  AQ L 
Sbjct: 240 NGVTFTTLIDGHCKNGRVDLAMEIYXQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLX 299

Query: 502 NLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
           + M   G+  D + YT+L     + G+ +   +     YR+R++
Sbjct: 300 DEMSMKGLKPDKITYTTLIDGSCKEGDLETAFE-----YRKRMI 338


>gi|255660858|gb|ACU25598.1| pentatricopeptide repeat-containing protein [Duranta serratifolia]
          Length = 418

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 114/404 (28%), Positives = 215/404 (53%), Gaps = 3/404 (0%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS-VLNALVKIHDDPDGNSH 131
            ++H+L ++ TMIH L  ++    A++++  +  R    + S V  A++        + +
Sbjct: 8   TFRHTLHTYCTMIHFLCTHQMLLEAKSLIRIVVSRKGKDSASAVFAAILGTKGTQRSDIY 67

Query: 132 VLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKM 191
           V S L+  Y       D +Q F   + H        C  +L  L K +   +VW  YK++
Sbjct: 68  VFSGLMTAYLESGFVHDAIQCFRLTKKHKFWVPFDTCRKVLEHLMKLKYFKLVWDFYKEI 127

Query: 192 VQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMH 251
           ++ G  A+++ +N+++H  CK  ++ + + +   +    +R  + ++NTL+  Y + G  
Sbjct: 128 LECGYPASLYFFNIVMHRFCKEGEMRRAQSVFDAITKWGLRPSVVSFNTLMNGYIRLGDL 187

Query: 252 YEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTL 309
            E   ++  M   G+ PD+ TY+ LI+G C+E ++ EA  LF ++  +G  PN VT+TTL
Sbjct: 188 DEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKVDEANELFNEMLDRGLVPNGVTFTTL 247

Query: 310 IDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI 369
           ID +C+   ++ A+ + + M ++G  P ++TYN+++  LCK+G ++    L++EM+   +
Sbjct: 248 IDVHCKNGMVDSAMEIYKQMLSQGFSPDLITYNTLIYGLCKKGDLKQVRALIDEMSMNGL 307

Query: 370 APDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKE 429
            PD +T  TLI+  CK GD  +A + + RM++  + LD   Y AL+ G C+    D A++
Sbjct: 308 KPDKITYTTLIDGCCKEGDLETAFEFRKRMIKESIRLDNVAYTALVSGLCQEGRADDAEK 367

Query: 430 LLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
           +   ML  G  P   +Y+ +++ +C K +     +LL E    G
Sbjct: 368 MFREMLSVGLKPDNGTYTMIINEFCKKGDVRTASRLLKEMQRDG 411



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 94/279 (33%), Positives = 153/279 (54%), Gaps = 2/279 (0%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           G    +  +N ++H FC+EG MR A+ +F  I   G  P+ V++ TL++GY R  DL+E 
Sbjct: 131 GYPASLYFFNIVMHRFCKEGEMRRAQSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEG 190

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            RL+  M A GV P V TY+ ++  LCKE ++ +AN L NEM ++ + P+ VT  TLI+ 
Sbjct: 191 FRLKSAMHASGVQPDVYTYSVLINGLCKESKVDEANELFNEMLDRGLVPNGVTFTTLIDV 250

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +CK G   SAM++  +ML  G   D  TY  LI+G CK  ++   + L+  M   G  P 
Sbjct: 251 HCKNGMVDSAMEIYKQMLSQGFSPDLITYNTLIYGLCKKGDLKQVRALIDEMSMNGLKPD 310

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ L+DG C + + E   +     +   + +D   Y AL+   C++ + D A+++F 
Sbjct: 311 KITYTTLIDGCCKEGDLETAFEFRKRMIKESIRLDNVAYTALVSGLCQEGRADDAEKMFR 370

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
            M   G+  D+  YT +   + + G+ +  S +L +M R
Sbjct: 371 EMLSVGLKPDNGTYTMIINEFCKKGDVRTASRLLKEMQR 409



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 90/310 (29%), Positives = 147/310 (47%), Gaps = 29/310 (9%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKI---ALRDFLSTPSVLNALVKIHDDPDGN 129
            Y  SL     ++H   K    + AQ++ + I    LR     PSV++            
Sbjct: 131 GYPASLYFFNIVMHRFCKEGEMRRAQSVFDAITKWGLR-----PSVVS------------ 173

Query: 130 SHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYK 189
               + L+  Y  L    +G ++   M    + P ++  +VL+N L K+   D   +++ 
Sbjct: 174 ---FNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKVDEANELFN 230

Query: 190 KMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKG 249
           +M+  G+V N   +  LI   CK+  VD   ++  +M  +    DL TYNTLI   CKKG
Sbjct: 231 EMLDRGLVPNGVTFTTLIDVHCKNGMVDSAMEIYKQMLSQGFSPDLITYNTLIYGLCKKG 290

Query: 250 MHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA----RRLFRDIKGATPNHVT 305
              +  A+ D M   G+ PD +TY +LI G C+EG +  A    +R+ ++      ++V 
Sbjct: 291 DLKQVRALIDEMSMNGLKPDKITYTTLIDGCCKEGDLETAFEFRKRMIKE--SIRLDNVA 348

Query: 306 YTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMN 365
           YT L+ G C+    ++A ++   M + G+ P   TY  I+ + CK+G +R A+RLL EM 
Sbjct: 349 YTALVSGLCQEGRADDAEKMFREMLSVGLKPDNGTYTMIINEFCKKGDVRTASRLLKEMQ 408

Query: 366 EKKIAPDNVT 375
                P  VT
Sbjct: 409 RDGHVPCVVT 418



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 89/343 (25%), Positives = 159/343 (46%), Gaps = 43/343 (12%)

Query: 232 RADLFTYNTLIALYCKKGMHYEALA----VQDRMEREGISP--------------DIVTY 273
           R  L TY T+I   C   M  EA +    V  R  ++  S               DI  +
Sbjct: 10  RHTLHTYCTMIHFLCTHQMLLEAKSLIRIVVSRKGKDSASAVFAAILGTKGTQRSDIYVF 69

Query: 274 NSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLR------- 326
           + L+  +   G + +A + FR     T  H  +       CR   LE  ++L+       
Sbjct: 70  SGLMTAYLESGFVHDAIQCFR----LTKKHKFWVPF--DTCR-KVLEHLMKLKYFKLVWD 122

Query: 327 ---EVMAAKGVYPG-VVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
              E++     YP  +  +N ++ + CKEG +R A  + + + +  + P  V+ NTL+N 
Sbjct: 123 FYKEILECG--YPASLYFFNIVMHRFCKEGEMRRAQSVFDAITKWGLRPSVVSFNTLMNG 180

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           Y ++GD     ++K+ M  +G+  D +TY  LI+G CK  ++D A EL   MLD G  P+
Sbjct: 181 YIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKVDEANELFNEMLDRGLVPN 240

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +++ L+D +C     ++ +++  + +S+G   D+  Y  LI   CKK  +   + L +
Sbjct: 241 GVTFTTLIDVHCKNGMVDSAMEIYKQMLSQGFSPDLITYNTLIYGLCKKGDLKQVRALID 300

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
            M  NG+  D + YT+L     + G+ +   +     +R+R++
Sbjct: 301 EMSMNGLKPDKITYTTLIDGCCKEGDLETAFE-----FRKRMI 338


>gi|255660792|gb|ACU25565.1| pentatricopeptide repeat-containing protein [Verbena bonariensis]
          Length = 418

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 119/404 (29%), Positives = 219/404 (54%), Gaps = 3/404 (0%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS-VLNALVKIHDDPDGNSH 131
            ++H+LQS+ TMIH L  ++    A+ +++ +  R    + S V  A+++       + +
Sbjct: 8   TFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTLRSDIY 67

Query: 132 VLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKM 191
           V S L+  Y      +D ++ +   + H        C  +L  L K +   +VW  Y++ 
Sbjct: 68  VFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEEN 127

Query: 192 VQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMH 251
           ++ G  A+++ +N+L+H+  K  ++   + +   +    +R  + ++NTL+  Y K G  
Sbjct: 128 LECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDL 187

Query: 252 YEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTL 309
            E   +++ M+  G+ PD+ TY+ LI+G C+E +M +A  LF ++  KG  PN VT+TTL
Sbjct: 188 NEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTL 247

Query: 310 IDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI 369
           IDG+C+   ++ A+ + + M ++ + P ++TYN+++  LCK+G ++ A  L++EM  K +
Sbjct: 248 IDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGL 307

Query: 370 APDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKE 429
            PD  T  TLI+  CK GD  +A + + RM++  + LD   Y ALI G C+      A++
Sbjct: 308 KPDKFTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEK 367

Query: 430 LLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
           +L  ML  G  P   +Y+ +++ +C K +     KLL E    G
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 91/279 (32%), Positives = 149/279 (53%), Gaps = 2/279 (0%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           G    +  +N L+H F +EG +R A+ +F  I   G  P+ V++ TL++GY +  DL E 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEG 190

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            RL+  M A GV P V TY+ ++  LCKE ++ DAN L +EM +K + P+ VT  TLI+ 
Sbjct: 191 FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDG 250

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +CK G    AM++  +ML   L  D  TY  LI+G CK  ++  A++L+  M+  G  P 
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPD 310

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ L+DG C + + E   +     +   + +D   Y ALI   C++ +   A+++  
Sbjct: 311 KFTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLR 370

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
            M   G+  +   YT +   + + G+    S +L +M R
Sbjct: 371 EMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQR 409



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/344 (27%), Positives = 155/344 (45%), Gaps = 45/344 (13%)

Query: 232 RADLFTYNTLIALYCKKGMHYEALA-VQDRMEREG-----------------ISPDIVTY 273
           R  L +Y T+I   C   M  EA   +Q  + R+G                 +  DI  +
Sbjct: 10  RHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTLRSDIYVF 69

Query: 274 NSLIHGFCREGRMREARRLFRDIKGATPNH---VTYTTLIDGYCRANDLEEALRLREVMA 330
           + LI  +   G +R+A   +R     T  H   V + T     CR   LE  ++L+    
Sbjct: 70  SGLITAYLESGFLRDAIECYR----LTKEHKFRVPFDT-----CR-KVLEHLMKLKYFKL 119

Query: 331 AKGVY---------PGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
             G Y           +  +N ++    KEG IR A  + + + +  + P  V+ NTL+N
Sbjct: 120 VWGFYEENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMN 179

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
            Y K+GD     ++KN M  +G+  D +TY  LI+G CK  +MD A  L   MLD G  P
Sbjct: 180 GYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVP 239

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
           +  +++ L+DG+C     +  +++  + +S+ L  D+  Y  LI   CKK  +  AQ L 
Sbjct: 240 NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLI 299

Query: 502 NLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
           + M   G+  D   YT+L     + G+ +   +     YR+R++
Sbjct: 300 DEMIMKGLKPDKFTYTTLIDGNCKEGDLETAFE-----YRKRMI 338



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 87/318 (27%), Positives = 149/318 (46%), Gaps = 31/318 (9%)

Query: 66  WAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKI---ALR-DFLSTPSVLNALVK 121
           + E+    Y  SL     ++H   K    + AQ++ + I    LR   +S  +++N  +K
Sbjct: 124 YEENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIK 183

Query: 122 IHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLT 181
           + D                       +G ++ + M+   + P ++  +VL+N L K+   
Sbjct: 184 LGD---------------------LNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKM 222

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
           D    ++ +M+  G+V N   +  LI   CK+  VD   ++  +M  + +  DL TYNTL
Sbjct: 223 DDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTL 282

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA----RRLFRDIK 297
           I   CKKG   +A  + D M  +G+ PD  TY +LI G C+EG +  A    +R+ ++  
Sbjct: 283 IYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLIDGNCKEGDLETAFEYRKRMIKE-- 340

Query: 298 GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDA 357
               + V YT LI G C+     +A ++   M + G+ P + TY  I+ + CK+G +   
Sbjct: 341 NIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTG 400

Query: 358 NRLLNEMNEKKIAPDNVT 375
           ++LL EM      P  VT
Sbjct: 401 SKLLKEMQRDGYKPSVVT 418


>gi|410109871|gb|AFV61015.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
           barbata]
          Length = 429

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 126/427 (29%), Positives = 220/427 (51%), Gaps = 4/427 (0%)

Query: 63  FFKWAES-AVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFL-STPSVLNALV 120
           FF W  S A   ++H+L S+ TMIH L  ++    A+++++ +  R    S  +V  A+ 
Sbjct: 1   FFTWLSSPANSTFRHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSAXAVFAAIX 60

Query: 121 KIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRL 180
           +       + +V S L+  Y      +D ++ +   R H L      C  +L  L K + 
Sbjct: 61  ETKGTQRXDIYVFSGLITTYLESGFLRDAIECYRLTREHKLRVPFDTCKKVLEHLMKLKY 120

Query: 181 TDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNT 240
             +VW     +   G       +N+L+H  CK  D+   + +   +    +R  + +YNT
Sbjct: 121 FKLVWGFXXXIXXXGXXXXXXFFNILMHRFCKDGDIRIAQSVFDAIAKWGLRPSVVSYNT 180

Query: 241 LIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKG 298
           L+  Y + G   E   ++  M   G+ PD+ TY+ LI+G C+E +M +A  LF +  +KG
Sbjct: 181 LMNGYIRLGDLNEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKG 240

Query: 299 ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDAN 358
             PN VT+TTLIDG+C+   ++ A+ + + M ++ + P ++TYN+++  LCK+G ++ A+
Sbjct: 241 LXPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAH 300

Query: 359 RLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGF 418
            L++EM+ K +  D +T  TLI+  CK GD  +A + + RM++  + LD   Y ALI G 
Sbjct: 301 DLIDEMSMKGLKXDKITYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTALISGL 360

Query: 419 CKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDV 478
           C+      A+++L  ML  G  P   +Y+ +++ +C K +     KLL +    G    V
Sbjct: 361 CQEGRSVDAEKMLREMLSVGLKPDTXTYTMIINEFCKKGDVWKGSKLLKDMQRNGHAPSV 420

Query: 479 SVYRALI 485
             Y  L+
Sbjct: 421 VTYNVLM 427



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 93/271 (34%), Positives = 147/271 (54%), Gaps = 2/271 (0%)

Query: 273 YNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMA 330
           +N L+H FC++G +R A+ +F  I   G  P+ V+Y TL++GY R  DL E  RL+  M 
Sbjct: 143 FNILMHRFCKDGDIRIAQSVFDAIAKWGLRPSVVSYNTLMNGYIRLGDLNEGFRLKSAML 202

Query: 331 AKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTA 390
           A GV P V TY+ ++  LCKE ++ DAN L +EM  K + P+ VT  TLI+ +CK G   
Sbjct: 203 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLXPNGVTFTTLIDGHCKNGRVD 262

Query: 391 SAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLV 450
            AM++  +ML   L+ D  TY  LI+G CK  ++  A +L+  M   G      +Y+ L+
Sbjct: 263 LAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKXDKITYTTLI 322

Query: 451 DGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGIL 510
           DG C + + +A  +     +   + +D   Y ALI   C++ +   A+++   M   G+ 
Sbjct: 323 DGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 382

Query: 511 GDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
            D+  YT +   + + G+    S +L DM R
Sbjct: 383 PDTXTYTMIINEFCKKGDVWKGSKLLKDMQR 413



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 88/335 (26%), Positives = 154/335 (45%), Gaps = 27/335 (8%)

Query: 232 RADLFTYNTLIALYCKKGMHYEALA-VQDRMEREGISP-----------------DIVTY 273
           R  L +Y T+I   C   M  EA + +Q  + R+G                    DI  +
Sbjct: 14  RHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSAXAVFAAIXETKGTQRXDIYVF 73

Query: 274 NSLIHGFCREGRMREA---RRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMA 330
           + LI  +   G +R+A    RL R+ K   P   T   +++   +    +        + 
Sbjct: 74  SGLITTYLESGFLRDAIECYRLTREHKLRVPFD-TCKKVLEHLMKLKYFKLVWGFXXXIX 132

Query: 331 AKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTA 390
             G       +N ++ + CK+G IR A  + + + +  + P  V+ NTL+N Y ++GD  
Sbjct: 133 XXGXXXXXXFFNILMHRFCKDGDIRIAQSVFDAIAKWGLRPSVVSYNTLMNGYIRLGDLN 192

Query: 391 SAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLV 450
              ++K+ ML +G+  D +TY  LI+G CK  +MD A EL   ML  G  P+  +++ L+
Sbjct: 193 EGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLXPNGVTFTTLI 252

Query: 451 DGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGIL 510
           DG+C     +  +++  + +S+ L  D+  Y  LI   CKK  +  A  L + M   G+ 
Sbjct: 253 DGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLK 312

Query: 511 GDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
            D + YT+L     + G+  A  +     +R+R++
Sbjct: 313 XDKITYTTLIDGCCKEGDLDAAFE-----HRKRMI 342



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 40/139 (28%), Positives = 67/139 (48%), Gaps = 3/139 (2%)

Query: 141 ANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANI 200
            +LK   D   + D+M +  L       T L++   K+   D  ++  K+M+Q  +  + 
Sbjct: 294 GDLKQAHD---LIDEMSMKGLKXDKITYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDD 350

Query: 201 HLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDR 260
             Y  LI   C+       EK+L EM    ++ D  TY  +I  +CKKG  ++   +   
Sbjct: 351 VAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTXTYTMIINEFCKKGDVWKGSKLLKD 410

Query: 261 MEREGISPDIVTYNSLIHG 279
           M+R G +P +VTYN L++G
Sbjct: 411 MQRNGHAPSVVTYNVLMNG 429


>gi|410109877|gb|AFV61018.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
           lycioides]
          Length = 397

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 117/395 (29%), Positives = 219/395 (55%), Gaps = 3/395 (0%)

Query: 77  SLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS-VLNALVKIHDDPDGNSHVLSW 135
           +L S+ TMIH+L  ++    A+++++ +  R    + S V  A+++       + +V S 
Sbjct: 1   TLDSYCTMIHLLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSG 60

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           L+  Y      +D  + +   R H        C  +L  L K +   +VW  Y+++++ G
Sbjct: 61  LITAYLESGFLRDAXECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECG 120

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
             A+++ +N+L+H  CK  D+   + +   +    +R  + ++NTL+  Y + G   E  
Sbjct: 121 YPASLYFFNILMHRFCKEGDIMVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDMDEGF 180

Query: 256 AVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGY 313
            +++ M   G+ PD+ TY+ LI+G C+E +M +A  +F ++  KG  PN VT+TTLIDG+
Sbjct: 181 RLKNAMHASGVQPDVYTYSVLINGLCKESKMDDANEMFDEMLDKGLVPNGVTFTTLIDGH 240

Query: 314 CRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDN 373
           C+   ++ A+ + + M ++ + P ++TYN+++  LCK+G ++ A+ L++EM+ K + PD 
Sbjct: 241 CKNGRVDLAMEIYKQMLSQSLXPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDK 300

Query: 374 VTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFG 433
           +T  TLI+  CK GD  +A + + RM++  + LD   Y ALI G C+ +    A+++L  
Sbjct: 301 ITYTTLIDGCCKEGDLETAFEHRKRMIQEXIRLDDVAYTALISGLCQEERYLDAEKVLRE 360

Query: 434 MLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
           ML  G  P   +Y+ +++ +C K +     KLL E
Sbjct: 361 MLSVGLKPDTGTYTMIINEFCKKGDVWTGSKLLKE 395



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 91/277 (32%), Positives = 149/277 (53%), Gaps = 2/277 (0%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           G    +  +N L+H FC+EG +  A+ +F  I   G  P+ V++ TL++GY R  D++E 
Sbjct: 120 GYPASLYFFNILMHRFCKEGDIMVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDMDEG 179

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            RL+  M A GV P V TY+ ++  LCKE ++ DAN + +EM +K + P+ VT  TLI+ 
Sbjct: 180 FRLKNAMHASGVQPDVYTYSVLINGLCKESKMDDANEMFDEMLDKGLVPNGVTFTTLIDG 239

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +CK G    AM++  +ML   L  D  TY  LI+G CK  ++  A +L+  M   G  P 
Sbjct: 240 HCKNGRVDLAMEIYKQMLSQSLXPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPD 299

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ L+DG C + + E   +     +   + +D   Y ALI   C++E+   A+++  
Sbjct: 300 KITYTTLIDGCCKEGDLETAFEHRKRMIQEXIRLDDVAYTALISGLCQEERYLDAEKVLR 359

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
            M   G+  D+  YT +   + + G+    S +L +M
Sbjct: 360 EMLSVGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEM 396



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 93/359 (25%), Positives = 161/359 (44%), Gaps = 34/359 (9%)

Query: 235 LFTYNTLIALYCKKGMHYEALA-VQDRMEREGISP-----------------DIVTYNSL 276
           L +Y T+I L C   M  EA + +Q  + R+G                    DI  ++ L
Sbjct: 2   LDSYCTMIHLLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGL 61

Query: 277 IHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYP 336
           I  +   G +R+A   +R     T  H  +       CR   LE  ++L+      G Y 
Sbjct: 62  ITAYLESGFLRDAXECYR----LTREHKFWVPF--DTCRKV-LEHLMKLKYFKLVWGFYE 114

Query: 337 GVVT---------YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
            ++          +N ++ + CKEG I  A  + N + +  + P  V+ NTL+N Y ++G
Sbjct: 115 EILECGYPASLYFFNILMHRFCKEGDIMVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLG 174

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
           D     ++KN M  +G+  D +TY  LI+G CK  +MD A E+   MLD G  P+  +++
Sbjct: 175 DMDEGFRLKNAMHASGVQPDVYTYSVLINGLCKESKMDDANEMFDEMLDKGLVPNGVTFT 234

Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGN 507
            L+DG+C     +  +++  + +S+ L  D+  Y  LI   CKK  +  A  L + M   
Sbjct: 235 TLIDGHCKNGRVDLAMEIYKQMLSQSLXPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMK 294

Query: 508 GILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
           G+  D + YT+L     + G+ +   +    M +  + +    Y +  +   ++   LD
Sbjct: 295 GLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQEXIRLDDVAYTALISGLCQEERYLD 353



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 59/278 (21%), Positives = 113/278 (40%), Gaps = 53/278 (19%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQ---NMLEKIALR-DFLSTPSVLNALVKIHDDPDG 128
            Y  SL     ++H   K      AQ   N + K  LR   +S  +++N  +++ D  +G
Sbjct: 120 GYPASLYFFNILMHRFCKEGDIMVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDMDEG 179

Query: 129 ------------NSHVLSWLVIFYANLKMTQ--DGLQVFDQMRVHNLMPHLHACTVLLNS 174
                          V ++ V+     K ++  D  ++FD+M    L+P+    T L++ 
Sbjct: 180 FRLKNAMHASGVQPDVYTYSVLINGLCKESKMDDANEMFDEMLDKGLVPNGVTFTTLIDG 239

Query: 175 LAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIH-------------------------- 208
             K+   D+  ++YK+M+   +  ++  YN LI+                          
Sbjct: 240 HCKNGRVDLAMEIYKQMLSQSLXPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPD 299

Query: 209 ---------ACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
                     CCK  D++   +    M  + +R D   Y  LI+  C++  + +A  V  
Sbjct: 300 KITYTTLIDGCCKEGDLETAFEHRKRMIQEXIRLDDVAYTALISGLCQEERYLDAEKVLR 359

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK 297
            M   G+ PD  TY  +I+ FC++G +    +L ++++
Sbjct: 360 EMLSVGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQ 397


>gi|255660832|gb|ACU25585.1| pentatricopeptide repeat-containing protein [Aloysia virgata]
 gi|410109881|gb|AFV61020.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
           virgata]
          Length = 418

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 119/404 (29%), Positives = 219/404 (54%), Gaps = 3/404 (0%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS-VLNALVKIHDDPDGNSH 131
            ++H+L S+ TMIH+L  ++    A++++  +  R    + S V  A+++       + +
Sbjct: 8   TFRHTLDSYCTMIHLLCTHQMLSEAKSLIRVVVSRKGKGSASAVFAAILETKGTQRSDIY 67

Query: 132 VLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKM 191
           V S L+  Y      +D ++ +   R H        C  +L  L K +   +VW  Y+++
Sbjct: 68  VFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEI 127

Query: 192 VQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMH 251
           +  G  A+++ +N+L+H  CK  D+   + +   +    +R  + ++NTL+  Y + G  
Sbjct: 128 LDCGYPASLYFFNILMHRFCKEGDIRVAQLVFNAITKWGLRPSVVSFNTLMNGYIRLGDL 187

Query: 252 YEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTL 309
            E   ++  M   G+ PD+ TY+ LI+G C+E +M +A  LF ++  KG  PN VT+TTL
Sbjct: 188 DEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANGLFDEMLDKGLVPNGVTFTTL 247

Query: 310 IDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI 369
           I G+C+   ++ A+ + + M ++ + P ++TYN+++  LCK+G ++ A+ L++EM+ K +
Sbjct: 248 IAGHCKNRRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGL 307

Query: 370 APDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKE 429
            PD +T  TLI+  CK GD  +A + + RM++  + LD   Y ALI G C+      A++
Sbjct: 308 KPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAEK 367

Query: 430 LLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
           +L  ML  G  P   +Y+ +++ +C K +     KLL E    G
Sbjct: 368 VLREMLSVGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 93/279 (33%), Positives = 148/279 (53%), Gaps = 2/279 (0%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           G    +  +N L+H FC+EG +R A+ +F  I   G  P+ V++ TL++GY R  DL+E 
Sbjct: 131 GYPASLYFFNILMHRFCKEGDIRVAQLVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEG 190

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            RL+  M A GV P V TY+ ++  LCKE ++ DAN L +EM +K + P+ VT  TLI  
Sbjct: 191 FRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANGLFDEMLDKGLVPNGVTFTTLIAG 250

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +CK      AM++  +ML   L  D  TY  LI+G CK  ++  A +L+  M   G  P 
Sbjct: 251 HCKNRRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPD 310

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ L+DG C + + E   +     +   + +D   Y ALI   C++ +   A+++  
Sbjct: 311 KITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAEKVLR 370

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
            M   G+  D+  YT +   + + G+    S +L +M R
Sbjct: 371 EMLSVGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQR 409



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 94/362 (25%), Positives = 161/362 (44%), Gaps = 34/362 (9%)

Query: 232 RADLFTYNTLIALYCKKGMHYEALA----VQDR-------------MEREGIS-PDIVTY 273
           R  L +Y T+I L C   M  EA +    V  R             +E +G    DI  +
Sbjct: 10  RHTLDSYCTMIHLLCTHQMLSEAKSLIRVVVSRKGKGSASAVFAAILETKGTQRSDIYVF 69

Query: 274 NSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKG 333
           + LI  +   G +R+A   +R     T  H  +       CR   LE  ++L+      G
Sbjct: 70  SGLITAYLESGFLRDAIECYR----LTREHKFWVPF--DTCRKV-LEHLMKLKYFKLVWG 122

Query: 334 VYPGVVT---------YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
            Y  ++          +N ++ + CKEG IR A  + N + +  + P  V+ NTL+N Y 
Sbjct: 123 FYEEILDCGYPASLYFFNILMHRFCKEGDIRVAQLVFNAITKWGLRPSVVSFNTLMNGYI 182

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           ++GD     ++K+ M  +G+  D +TY  LI+G CK  +MD A  L   MLD G  P+  
Sbjct: 183 RLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANGLFDEMLDKGLVPNGV 242

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
           +++ L+ G+C     +  +++  + +S+ L  D+  Y  LI   CKK  +  A  L + M
Sbjct: 243 TFTTLIAGHCKNRRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEM 302

Query: 505 QGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
              G+  D + YT+L     + G+ +   +    M +  + +    Y +  +   ++   
Sbjct: 303 SMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRY 362

Query: 565 LD 566
           LD
Sbjct: 363 LD 364



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 92/369 (24%), Positives = 154/369 (41%), Gaps = 36/369 (9%)

Query: 232 RADLFTYNTLIALYCKKGMHYEALAVQDRMEREG---ISPDI----------VTYNSLIH 278
           R+D++ ++ LI  Y + G   +A+    R+ RE    +  D           + Y  L+ 
Sbjct: 63  RSDIYVFSGLITAYLESGFLRDAIECY-RLTREHKFWVPFDTCRKVLEHLMKLKYFKLVW 121

Query: 279 GFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGV 338
           GF  E           D  G   +   +  L+  +C+  D+  A  +   +   G+ P V
Sbjct: 122 GFYEE---------ILDC-GYPASLYFFNILMHRFCKEGDIRVAQLVFNAITKWGLRPSV 171

Query: 339 VTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNR 398
           V++N+++    + G + +  RL + M+   + PD  T + LIN  CK      A  + + 
Sbjct: 172 VSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANGLFDE 231

Query: 399 MLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNN 458
           ML+ GL+ +  T+  LI G CK + +D+A E+   ML    SP   +Y+ L+ G C K +
Sbjct: 232 MLDKGLVPNGVTFTTLIAGHCKNRRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGD 291

Query: 459 EEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTS 518
            +    L+DE   +GL  D   Y  LI   CK+  ++ A      M    I  D V YT+
Sbjct: 292 LKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTA 351

Query: 519 LAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLM 578
           L     + G       +L +M    L      Y      + K  ++    W+        
Sbjct: 352 LISGLCQEGRYLDAEKVLREMLSVGLKPDTGTYTMIINEFCKKGDV----WT-------- 399

Query: 579 SKHIFKEMQ 587
              + KEMQ
Sbjct: 400 GSKLLKEMQ 408



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 61/132 (46%), Gaps = 3/132 (2%)

Query: 141 ANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANI 200
            +LK   D   + D+M +  L P     T L++   K+   +  ++  K+M+Q  +  + 
Sbjct: 290 GDLKQAHD---LIDEMSMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDD 346

Query: 201 HLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDR 260
             Y  LI   C+       EK+L EM    ++ D  TY  +I  +CKKG  +    +   
Sbjct: 347 VAYTALISGLCQEGRYLDAEKVLREMLSVGLKPDTGTYTMIINEFCKKGDVWTGSKLLKE 406

Query: 261 MEREGISPDIVT 272
           M+R+G  P +V+
Sbjct: 407 MQRDGHVPSVVS 418


>gi|334188438|ref|NP_200395.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332009303|gb|AED96686.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1136

 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 143/521 (27%), Positives = 236/521 (45%), Gaps = 39/521 (7%)

Query: 59  LSCAFFKWA-ESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLN 117
           L+  F KW  +       H +Q      HIL + + +  A+++L++++L    S+  V  
Sbjct: 92  LALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSLMSGKSS-FVFG 150

Query: 118 ALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAK 177
           AL+  +   + N  V   L+  Y    M QD L++F  M ++   P ++ C  +L S+ K
Sbjct: 151 ALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVK 210

Query: 178 DRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFT 237
                 VW   K+M++  +  ++  +N+LI+  C     +K   L+ +ME       + T
Sbjct: 211 SGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVT 270

Query: 238 YNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK 297
           YNT++  YCKKG    A+ + D M+ +G+  D+ TYN LIH  CR  R+ +   L RD++
Sbjct: 271 YNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMR 330

Query: 298 -------------------------------------GATPNHVTYTTLIDGYCRANDLE 320
                                                G +PNHVT+  LIDG+    + +
Sbjct: 331 KRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFK 390

Query: 321 EALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLI 380
           EAL++  +M AKG+ P  V+Y  +L  LCK      A      M    +    +T   +I
Sbjct: 391 EALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMI 450

Query: 381 NAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFS 440
           +  CK G    A+ + N M + G+  D  TY ALI+GFCK      AKE++  +   G S
Sbjct: 451 DGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLS 510

Query: 441 PSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRL 500
           P+   YS L+   C     +  +++ +  +  G   D   +  L+   CK  KV  A+  
Sbjct: 511 PNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEF 570

Query: 501 FNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
              M  +GIL ++V +  L   Y  +GE      + D+M +
Sbjct: 571 MRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTK 611



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 140/560 (25%), Positives = 235/560 (41%), Gaps = 72/560 (12%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHV 132
            Y  ++ ++ T++H   K   FK+A  +L+ +  +   +     N L  IHD    N   
Sbjct: 263 GYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNML--IHDLCRSNRIA 320

Query: 133 LSWLVI--------------------FYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLL 172
             +L++                     ++N        Q+ ++M    L P+     V  
Sbjct: 321 KGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPN----HVTF 376

Query: 173 NSLAKDRLTDMVWKVYKKMVQL----GVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEF 228
           N+L    +++  +K   KM  +    G+  +   Y VL+   CK+++ D        M+ 
Sbjct: 377 NALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKR 436

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
             V     TY  +I   CK G   EA+ + + M ++GI PDIVTY++LI+GFC+ GR + 
Sbjct: 437 NGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKT 496

Query: 289 AR----RLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSI 344
           A+    R++R   G +PN + Y+TLI   CR   L+EA+R+ E M  +G      T+N +
Sbjct: 497 AKEIVCRIYR--VGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVL 554

Query: 345 LRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGL 404
           +  LCK G++ +A   +  M    I P+ V+ + LIN Y   G+   A  V + M + G 
Sbjct: 555 VTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGH 614

Query: 405 MLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLK 464
               FTY +L+ G CK   +  A++ L  +     +     Y+ L+   C   N    + 
Sbjct: 615 HPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVS 674

Query: 465 LLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG-ILGDSVIYTSLAYAY 523
           L  E V R +  D   Y +LI   C+K K   A       +  G +L + V+YT      
Sbjct: 675 LFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGM 734

Query: 524 WRAGEPKA-----------------------------------CSDILDDMYRRRLMITL 548
           ++AG+ KA                                    +D+L +M  +     L
Sbjct: 735 FKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNL 794

Query: 549 KIYRSFSASYAKDNEILDLF 568
             Y      Y+K  ++   F
Sbjct: 795 TTYNILLHGYSKRKDVSTSF 814



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 113/421 (26%), Positives = 193/421 (45%), Gaps = 39/421 (9%)

Query: 195 GVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEA 254
           GV A++  YN+LIH  C+S+ + K   LL +M  + +  +  TYNTLI  +  +G    A
Sbjct: 298 GVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIA 357

Query: 255 LAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF--RDIKGATPNHV-------- 304
             + + M   G+SP+ VT+N+LI G   EG  +EA ++F   + KG TP+ V        
Sbjct: 358 SQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDG 417

Query: 305 ---------------------------TYTTLIDGYCRANDLEEALRLREVMAAKGVYPG 337
                                      TYT +IDG C+   L+EA+ L   M+  G+ P 
Sbjct: 418 LCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPD 477

Query: 338 VVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKN 397
           +VTY++++   CK GR + A  ++  +    ++P+ +  +TLI   C++G    A+++  
Sbjct: 478 IVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYE 537

Query: 398 RMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKN 457
            M+  G   D FT+  L+   CKA ++  A+E +  M   G  P+  S+  L++GY N  
Sbjct: 538 AMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSG 597

Query: 458 NEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYT 517
                  + DE    G       Y +L++  CK   +  A++    +       D+V+Y 
Sbjct: 598 EGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYN 657

Query: 518 SLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNE--ILDLFWSHVVDR 575
           +L  A  ++G       +  +M +R ++     Y S  +   +  +  I  LF      R
Sbjct: 658 TLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEAR 717

Query: 576 G 576
           G
Sbjct: 718 G 718



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 93/392 (23%), Positives = 172/392 (43%), Gaps = 3/392 (0%)

Query: 156 MRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSD 215
           M    ++P+  +   L+N           + V+ +M ++G       Y  L+   CK   
Sbjct: 574 MTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGH 633

Query: 216 VDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNS 275
           + + EK L  +       D   YNTL+   CK G   +A+++   M +  I PD  TY S
Sbjct: 634 LREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTS 693

Query: 276 LIHGFCREGRMREARRLFRDIKG---ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAK 332
           LI G CR+G+   A    ++ +      PN V YT  +DG  +A   +  +  RE M   
Sbjct: 694 LISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNL 753

Query: 333 GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
           G  P +VT N+++    + G+I   N LL EM  +   P+  T N L++ Y K  D +++
Sbjct: 754 GHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTS 813

Query: 393 MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
             +   ++  G++ D+ T  +L+ G C++  ++I  ++L   +  G      +++ L+  
Sbjct: 814 FLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISK 873

Query: 453 YCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGD 512
            C          L+    S G+ +D     A++    +  +   ++ + + M   GI  +
Sbjct: 874 CCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPE 933

Query: 513 SVIYTSLAYAYWRAGEPKACSDILDDMYRRRL 544
           S  Y  L     R G+ K    + ++M   ++
Sbjct: 934 SRKYIGLINGLCRVGDIKTAFVVKEEMIAHKI 965



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 101/355 (28%), Positives = 157/355 (44%), Gaps = 39/355 (10%)

Query: 238 YNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI- 296
           Y+ LI +Y ++GM  ++L +   M   G +P + T N+++    + G         +++ 
Sbjct: 166 YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEML 225

Query: 297 -KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIR 355
            +   P+  T+  LI+  C     E++  L + M   G  P +VTYN++L   CK+GR +
Sbjct: 226 KRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFK 285

Query: 356 DA-----------------------------NR------LLNEMNEKKIAPDNVTCNTLI 380
            A                             NR      LL +M ++ I P+ VT NTLI
Sbjct: 286 AAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLI 345

Query: 381 NAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFS 440
           N +   G    A ++ N ML  GL  +  T+ ALI G         A ++ + M   G +
Sbjct: 346 NGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLT 405

Query: 441 PSYCSYSWLVDGYCNKNNEEALLKLLDEFVSR-GLCVDVSVYRALIRRFCKKEKVDYAQR 499
           PS  SY  L+DG C KN E  L +     + R G+CV    Y  +I   CK   +D A  
Sbjct: 406 PSEVSYGVLLDGLC-KNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVV 464

Query: 500 LFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSF 554
           L N M  +GI  D V Y++L   + + G  K   +I+  +YR  L     IY + 
Sbjct: 465 LLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTL 519



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 119/531 (22%), Positives = 200/531 (37%), Gaps = 109/531 (20%)

Query: 129  NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
            N+     L+  Y N         VFD+M      P       LL  L K        K  
Sbjct: 582  NTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFL 641

Query: 189  KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
            K +  +    +  +YN L+ A CKS ++ K   L  EM  + +  D +TY +LI+  C+K
Sbjct: 642  KSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRK 701

Query: 249  GMHYEALAV------------------------------------QDRMEREGISPDIVT 272
            G    A+                                      +++M+  G +PDIVT
Sbjct: 702  GKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVT 761

Query: 273  YNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGY----------------- 313
             N++I G+ R G++ +   L  ++  +   PN  TY  L+ GY                 
Sbjct: 762  TNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSII 821

Query: 314  ------------------CRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEG--- 352
                              C +N LE  L++ +    +GV     T+N ++ K C  G   
Sbjct: 822  LNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEIN 881

Query: 353  --------------------------------RIRDANRLLNEMNEKKIAPDNVTCNTLI 380
                                            R +++  +L+EM+++ I+P++     LI
Sbjct: 882  WAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLI 941

Query: 381  NAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFS 440
            N  C++GD  +A  VK  M+   +        A++    K  + D A  LL  ML     
Sbjct: 942  NGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLV 1001

Query: 441  PSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRL 500
            P+  S++ L+   C   N    L+L     + GL +D+  Y  LI   C K  +  A  L
Sbjct: 1002 PTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFEL 1061

Query: 501  FNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSD-ILDDMYRRRLMITLKI 550
            +  M+G+G L ++  Y +L           + +D IL D+  R  + ++ +
Sbjct: 1062 YEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLLARGFITSMSL 1112


>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
 gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
          Length = 816

 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 131/400 (32%), Positives = 208/400 (52%), Gaps = 11/400 (2%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           + +Q+F++M   N+ P   +  +L++ LAK    +    +++K++  GV  +   Y  LI
Sbjct: 306 EAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLI 365

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           H  C ++  D   +L  +M  +       TYN +I   CK+GM  EA  +  +M  +G  
Sbjct: 366 HGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHV 425

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLI---------DGYCRA 316
           PD+VTYN+++ G C+  R+ EA  LF +++  G TPN  ++ T+I         D  C+ 
Sbjct: 426 PDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQR 485

Query: 317 NDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTC 376
             L+EA RL + M   G  P VVTY++++  LC   R+ DA  LL +M +++  P  VT 
Sbjct: 486 GKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQ 545

Query: 377 NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD 436
           NTLI+  CK G    A +V + M+ +G   D  TY  L+HG C+A + + A+ELL  M+ 
Sbjct: 546 NTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVA 605

Query: 437 AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDY 496
            G +P+  +Y+ LV G C  N       +  +  S G   ++  Y ALI  FC   +VD 
Sbjct: 606 RGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDG 665

Query: 497 AQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDIL 536
             +LF  M   GI  D V+Y +LA    ++G      +IL
Sbjct: 666 GLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEIL 705



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 132/473 (27%), Positives = 210/473 (44%), Gaps = 30/473 (6%)

Query: 80  SHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIF 139
           S+  +I  L K      A+N+ +K+       TPS +     IH     NS         
Sbjct: 325 SYGILIDGLAKAGKLNDARNLFQKLLHSGV--TPSTVAYTSLIHGLCMANSF-------- 374

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
                   D  ++F  M      P      V++++  K  + +    + KKM++ G V +
Sbjct: 375 -------DDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPD 427

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIA---------LYCKKGM 250
           +  YN ++   CKSS V++   L  EME      +  ++NT+I            C++G 
Sbjct: 428 VVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGK 487

Query: 251 HYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTT 308
             EA  +  RM  +G  PD+VTY++LI G C   R+ +AR L  D+  +   P  VT  T
Sbjct: 488 LDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNT 547

Query: 309 LIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKK 368
           LI G C+A  ++EA  + + M + G  P VVTYN+++   C+ G+   A  LL++M  + 
Sbjct: 548 LIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARG 607

Query: 369 IAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAK 428
           +AP+ VT   L++  CK      A  V  +M  +G   + FTY ALI GFC A ++D   
Sbjct: 608 LAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGL 667

Query: 429 ELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS--RGLCVDVSVYRALIR 486
           +L   M+ AG SP +  Y  L    C        L++L E     R       VYR  + 
Sbjct: 668 KLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVD 727

Query: 487 RFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
              +  K++ A      M   G L       SL     ++G+      +L+++
Sbjct: 728 GLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEI 780



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 120/434 (27%), Positives = 197/434 (45%), Gaps = 20/434 (4%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           + LQV+ + R     P L    VLL         D   ++ + M       +   Y  ++
Sbjct: 198 EALQVYRENRRE---PCLVTLNVLLEGFCSRGQVDKARELLRAMPDEECAPDEVSYCTVL 254

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRAD------LFTYNTLIALYCKKGMHYEALAVQDRM 261
              CK+  V++  +L  + E     +       L  YN +I   C+     EA+ + ++M
Sbjct: 255 DGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKM 314

Query: 262 EREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDL 319
               +SPD  +Y  LI G  + G++ +AR LF+ +   G TP+ V YT+LI G C AN  
Sbjct: 315 NERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSF 374

Query: 320 EEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTL 379
           ++A  L   M  +G  P  VTYN ++   CK G + +A  L+ +M E    PD VT NT+
Sbjct: 375 DDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTV 434

Query: 380 INAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKE---------L 430
           ++  CK      A+ + N M   G   ++ ++  +I G C+  ++D A +         L
Sbjct: 435 MDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRL 494

Query: 431 LFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCK 490
           L  M D G  P   +YS L+ G C+    +    LL++ V R     V     LI   CK
Sbjct: 495 LKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCK 554

Query: 491 KEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKI 550
             ++  A+ + + M  +G   D V Y +L + + RAG+ +   ++L DM  R L   +  
Sbjct: 555 AGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVT 614

Query: 551 YRSFSASYAKDNEI 564
           Y +  +   K N +
Sbjct: 615 YTALVSGLCKANRL 628



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 107/362 (29%), Positives = 183/362 (50%), Gaps = 15/362 (4%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           V D+MR   + P+    + L + L    L   + + ++ ++++  VAN   YN+++ A C
Sbjct: 101 VMDEMRSRMIPPYFATSSFLAHELC---LRGSMERAFQ-LLEIMPVANSSAYNIVVVALC 156

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           K++ VD   +L   M  K +     + ++++      G   EAL V     RE   P +V
Sbjct: 157 KAARVDDALELARTMSEKRIPLAAGSLDSVLVGLMDSGRIDEALQVYRENRRE---PCLV 213

Query: 272 TYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL---R 326
           T N L+ GFC  G++ +AR L R +  +   P+ V+Y T++DG C+A  +EEA+RL   R
Sbjct: 214 TLNVLLEGFCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDR 273

Query: 327 EVMAAKGVYPGVVT---YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
           E+ ++        +   YN ++  LC+  RI +A ++  +MNE+ ++PD+ +   LI+  
Sbjct: 274 ELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGL 333

Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY 443
            K G    A  +  ++L +G+      Y +LIHG C A   D A+EL   M   G  PS 
Sbjct: 334 AKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSP 393

Query: 444 CSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNL 503
            +Y+ ++D  C +   E    L+ + +  G   DV  Y  ++   CK  +V+ A  LFN 
Sbjct: 394 VTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNE 453

Query: 504 MQ 505
           M+
Sbjct: 454 ME 455



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 117/429 (27%), Positives = 195/429 (45%), Gaps = 39/429 (9%)

Query: 77  SLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALV---------------- 120
           S  ++ ++IH L     F  A+ +   +  R    +P   N ++                
Sbjct: 357 STVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLI 416

Query: 121 -KIHDD---PDGNSHVLSWLVIFYANLKMT--QDGLQVFDQMRVHNLMPHLHA-CTVLLN 173
            K+ +D   PD    V+++  +     K +  ++ L +F++M      P+  +  T++L 
Sbjct: 417 KKMIEDGHVPD----VVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILG 472

Query: 174 SLAKDRLT--------DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCE 225
              + ++         D  +++ K+M   G V ++  Y+ LI   C  + VD    LL +
Sbjct: 473 LCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLED 532

Query: 226 MEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGR 285
           M  +  +  + T NTLI   CK G   EA  V D M   G SPD+VTYN+L+HG CR G+
Sbjct: 533 MVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQ 592

Query: 286 MREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNS 343
              AR L  D+  +G  PN VTYT L+ G C+AN L EA  +   M + G  P + TY +
Sbjct: 593 TERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTA 652

Query: 344 ILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEA- 402
           ++   C  G++    +L  EM    I+PD+V   TL    CK G +A A+++     E+ 
Sbjct: 653 LILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESL 712

Query: 403 -GLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEA 461
                    Y+  + G  +A +M++A   +  M+  G  P+    + LV G C       
Sbjct: 713 RSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGE 772

Query: 462 LLKLLDEFV 470
              +L+E +
Sbjct: 773 ARAVLEEIM 781



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 94/347 (27%), Positives = 155/347 (44%), Gaps = 11/347 (3%)

Query: 202 LYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRM 261
           +YNVLI +  K  + + V+K++  M  +    D FT+ T++   CK G   EA  V D M
Sbjct: 46  VYNVLIDSLSKRQETEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEM 105

Query: 262 EREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEE 321
               I P   T + L H  C  G M  A +L   +  A  N   Y  ++   C+A  +++
Sbjct: 106 RSRMIPPYFATSSFLAHELCLRGSMERAFQLLEIMPVA--NSSAYNIVVVALCKAARVDD 163

Query: 322 ALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
           AL L   M+ K +     + +S+L  L   GRI +A   L    E +  P  VT N L+ 
Sbjct: 164 ALELARTMSEKRIPLAAGSLDSVLVGLMDSGRIDEA---LQVYRENRREPCLVTLNVLLE 220

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIA------KELLFGML 435
            +C  G    A ++   M +     D+ +Y  ++ G CKA  ++ A      +EL     
Sbjct: 221 GFCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSS 280

Query: 436 DAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVD 495
            +   PS   Y+ ++ G C  +  +  +++ ++   R +  D   Y  LI    K  K++
Sbjct: 281 SSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLN 340

Query: 496 YAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRR 542
            A+ LF  +  +G+   +V YTSL +    A       ++  DM RR
Sbjct: 341 DARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRR 387



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 83/341 (24%), Positives = 138/341 (40%), Gaps = 76/341 (22%)

Query: 261 MEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGA-TPNHVTYTTLIDGYCRANDL 319
           M ++GI P  + + S+I G+C  GR  EA ++F  ++   +P    Y  LID   +  + 
Sbjct: 1   MFQQGIFPAPLLFTSVIQGWCNVGRTFEAVKIFSLMEECHSPYPDVYNVLIDSLSKRQET 60

Query: 320 EEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAP-------- 371
           E   ++ +VM  +G +P   T+ +IL  LCK G++ +A  +++EM  + I P        
Sbjct: 61  EAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFL 120

Query: 372 -----------------------DNVTCNTLINAYCKIGDTASAMKVKNRMLE------- 401
                                  ++   N ++ A CK      A+++   M E       
Sbjct: 121 AHELCLRGSMERAFQLLEIMPVANSSAYNIVVVALCKAARVDDALELARTMSEKRIPLAA 180

Query: 402 -------AGLM----LDQ--------------FTYKALIHGFCKAKEMDIAKELLFGMLD 436
                   GLM    +D+               T   L+ GFC   ++D A+ELL  M D
Sbjct: 181 GSLDSVLVGLMDSGRIDEALQVYRENRREPCLVTLNVLLEGFCSRGQVDKARELLRAMPD 240

Query: 437 AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSV---------YRALIRR 487
              +P   SY  ++DG C     E  ++L   F  R L    S          Y  +I  
Sbjct: 241 EECAPDEVSYCTVLDGLCKAGRVEEAVRL---FGDRELPSSSSSSSSPPSLRGYNIVILG 297

Query: 488 FCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
            C+ +++D A ++F  M    +  DS  Y  L     +AG+
Sbjct: 298 LCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGK 338


>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
 gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 129/400 (32%), Positives = 211/400 (52%), Gaps = 2/400 (0%)

Query: 156 MRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSD 215
           M+     P + + + ++N          V K+ ++M   G+  N++ YN +I   CKS  
Sbjct: 1   MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGK 60

Query: 216 VDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNS 275
           VD  E++L EM  + +  D   Y TLI  +CK G    A  + D ME++ I PD + Y +
Sbjct: 61  VDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTA 120

Query: 276 LIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKG 333
           +I G CR G+M EA ++F  +  +G  P+ VTYTTLIDGYC++ ++E+A  L   M   G
Sbjct: 121 VICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSG 180

Query: 334 VYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAM 393
           + P VVTY ++   LCK G++  AN LL+EM  K +  +  T N+L+N  CK G+   A+
Sbjct: 181 LTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAV 240

Query: 394 KVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGY 453
           K+   M  AG+  D  T+  L+  +CK  EM  A ELL  MLD G  P+  +++ L++G+
Sbjct: 241 KLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGF 300

Query: 454 CNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDS 513
           C     E   +LL   + +G+  + + Y +L++++C +  +     ++  M   G++ DS
Sbjct: 301 CMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDS 360

Query: 514 VIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRS 553
             Y  L   + +A   K    +  +M  +   +T   Y S
Sbjct: 361 NTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNS 400



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 137/442 (30%), Positives = 220/442 (49%), Gaps = 5/442 (1%)

Query: 124 DDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDM 183
           D PD  S+  S ++  Y      Q  L++  +M++  L P+L+    ++  L K    D 
Sbjct: 6   DAPDVVSY--STVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDD 63

Query: 184 VWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIA 243
             +V ++M+  G+V +  +Y  LI   CK  ++    KL  EME + +  D   Y  +I 
Sbjct: 64  AERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVIC 123

Query: 244 LYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATP 301
             C+ G   EA  V ++M   G+ PD VTY +LI G+C+ G M +A  L   +   G TP
Sbjct: 124 GLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTP 183

Query: 302 NHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLL 361
           N VTYT L DG C+   ++ A  L   M  KG+   + TYNS++  LCK G IR A +L+
Sbjct: 184 NVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLM 243

Query: 362 NEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKA 421
            EM    + PD +T  TL++AYCK G+   A ++   ML+ GL     T+  L++GFC +
Sbjct: 244 EEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMS 303

Query: 422 KEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVY 481
             ++  + LL  ML+ G  P+  +Y+ L+  YC +NN     ++     +RG+  D + Y
Sbjct: 304 GMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTY 363

Query: 482 RALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
             LI+  CK   +  A  L   M   G    +  Y S+   +++  +     ++ ++M R
Sbjct: 364 NILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRR 423

Query: 542 RRLMITLKIYRSF-SASYAKDN 562
             +    +IY  F   SY + N
Sbjct: 424 EGMAADAEIYNLFVDISYGEGN 445



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 115/379 (30%), Positives = 193/379 (50%), Gaps = 2/379 (0%)

Query: 195 GVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEA 254
           G   ++  Y+ +I+  C   ++ KV KL+ EM+ K ++ +L+TYN++I L CK G   +A
Sbjct: 5   GDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDA 64

Query: 255 LAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGA--TPNHVTYTTLIDG 312
             V   M  +GI PD V Y +LI GFC+ G ++ A +LF +++     P+ + YT +I G
Sbjct: 65  ERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICG 124

Query: 313 YCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPD 372
            CR   + EA ++   M ++GV P  VTY +++   CK G +  A  L N+M +  + P+
Sbjct: 125 LCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPN 184

Query: 373 NVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLF 432
            VT   L +  CK+G   +A ++ + M   GL L+  TY +L++G CK+  +  A +L+ 
Sbjct: 185 VVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLME 244

Query: 433 GMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKE 492
            M  AG  P   +++ L+D YC         +LL E + RGL   V  +  L+  FC   
Sbjct: 245 EMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSG 304

Query: 493 KVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYR 552
            ++  +RL   M   GI+ ++  Y SL   Y      +  ++I   M  R +M     Y 
Sbjct: 305 MLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYN 364

Query: 553 SFSASYAKDNEILDLFWSH 571
                + K   + + ++ H
Sbjct: 365 ILIKGHCKARNMKEAWFLH 383



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 99/322 (30%), Positives = 163/322 (50%), Gaps = 43/322 (13%)

Query: 297 KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRD 356
           +G  P+ V+Y+T+I+GYC   +L++ L+L + M  KG+ P + TYNSI+  LCK G++ D
Sbjct: 4   RGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDD 63

Query: 357 ANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAM----------------------- 393
           A R+L EM  + I PD V   TLI+ +CK+G+  +A                        
Sbjct: 64  AERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVIC 123

Query: 394 ------------KVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
                       KV N+M   G+  D+ TY  LI G+CK+ EM+ A  L   M+ +G +P
Sbjct: 124 GLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTP 183

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
           +  +Y+ L DG C     +   +LL E   +GL +++  Y +L+   CK   +  A +L 
Sbjct: 184 NVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLM 243

Query: 502 NLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYA-- 559
             M+  G+  D++ +T+L  AY + GE     ++L +M  R L  T+  +      +   
Sbjct: 244 EEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMS 303

Query: 560 ---KDNEILDLFWSHVVDRGLM 578
              +D E L L W  ++++G+M
Sbjct: 304 GMLEDGERL-LAW--MLEKGIM 322



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 98/323 (30%), Positives = 164/323 (50%), Gaps = 2/323 (0%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           +VF++M    + P     T L++   K    +  + ++ +MVQ G+  N+  Y  L    
Sbjct: 136 KVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGL 195

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           CK   VD   +LL EM  K ++ ++ TYN+L+   CK G   +A+ + + ME  G+ PD 
Sbjct: 196 CKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDT 255

Query: 271 VTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
           +T+ +L+  +C+ G M +A  L R++  +G  P  +T+  L++G+C +  LE+  RL   
Sbjct: 256 ITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAW 315

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M  KG+ P   TYNS++++ C    +R    +   M  + + PD+ T N LI  +CK  +
Sbjct: 316 MLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARN 375

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
              A  +   M E G  L   +Y ++I GF K K++  A+EL   M   G +     Y+ 
Sbjct: 376 MKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRREGMAADAEIYNL 435

Query: 449 LVDGYCNKNNEEALLKLLDEFVS 471
            VD    + N E  L+L DE + 
Sbjct: 436 FVDISYGEGNMETALELCDEAIE 458



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 84/330 (25%), Positives = 146/330 (44%), Gaps = 39/330 (11%)

Query: 109 FLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHAC 168
            +    V N +     +PD  ++  + L+  Y      +    + +QM    L P++   
Sbjct: 131 MMEADKVFNKMFSRGVEPDEVTY--TTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTY 188

Query: 169 TVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEF 228
           T L + L K    D   ++  +M   G+  NI  YN L++  CKS ++ +  KL+ EME 
Sbjct: 189 TALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEV 248

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
             +  D  T+ TL+  YCK G   +A  +   M   G+ P ++T+N L++GFC  G + +
Sbjct: 249 AGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLED 308

Query: 289 ARRLF-----RDI--------------------------------KGATPNHVTYTTLID 311
             RL      + I                                +G  P+  TY  LI 
Sbjct: 309 GERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIK 368

Query: 312 GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAP 371
           G+C+A +++EA  L + MA KG      +YNSI++   K+ +I +A  L  EM  + +A 
Sbjct: 369 GHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRREGMAA 428

Query: 372 DNVTCNTLINAYCKIGDTASAMKVKNRMLE 401
           D    N  ++     G+  +A+++ +  +E
Sbjct: 429 DAEIYNLFVDISYGEGNMETALELCDEAIE 458


>gi|255660774|gb|ACU25556.1| pentatricopeptide repeat-containing protein [Verbena orcuttiana]
          Length = 418

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 117/404 (28%), Positives = 219/404 (54%), Gaps = 3/404 (0%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS-VLNALVKIHDDPDGNSH 131
            ++H+LQS+ TMIH L  ++    A+ +++ +  R    + S V  A+++       + +
Sbjct: 8   TFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIY 67

Query: 132 VLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKM 191
           V S L+  Y      +D ++ +   + H        C  +L  L K +   +VW  Y++ 
Sbjct: 68  VFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEES 127

Query: 192 VQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMH 251
           ++ G  A+++ +N+L+H+  K  ++   + +   +    +R  + ++NTL+  Y K G  
Sbjct: 128 LECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDL 187

Query: 252 YEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTL 309
            E   +++ M+  G+ PD+ TY+ LI+G C+E +M +A  LF ++   G  PN VT+TTL
Sbjct: 188 DEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTL 247

Query: 310 IDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI 369
           IDG+C+   ++ A+ + + M ++ +   ++TYN+++  LCK+G ++ A  L++EM+ K +
Sbjct: 248 IDGHCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGL 307

Query: 370 APDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKE 429
            PD +T  TLI+  CK GD  +A + + RM++  + LD   Y ALI G C+      A++
Sbjct: 308 KPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEK 367

Query: 430 LLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
           +L  ML  G  P   +Y+ +++ +C K +     KLL E    G
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 90/283 (31%), Positives = 148/283 (52%), Gaps = 2/283 (0%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           G    +  +N L+H F +EG +R A+ +F  I      P+ V++ TL++GY +  DL+E 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEG 190

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            RL+  M A GV P V TY+ ++  LCKE ++ DAN L +EM +  + P+ VT  TLI+ 
Sbjct: 191 FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDG 250

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +CK G    AM++  +ML   L  D  TY  LI+G CK  ++  A++L+  M   G  P 
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPD 310

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ L+DG C + + E   +     +   + +D   Y ALI   C++ +   A+++  
Sbjct: 311 KITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLR 370

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
            M   G+  +   YT +   + + G+    S +L +M R   M
Sbjct: 371 EMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYM 413



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 89/318 (27%), Positives = 153/318 (48%), Gaps = 31/318 (9%)

Query: 66  WAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKI---ALR-DFLSTPSVLNALVK 121
           + ES    Y  SL     ++H   K    + AQ++ + I   +LR   +S  +++N  +K
Sbjct: 124 YEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIK 183

Query: 122 IHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLT 181
           + D                       +G ++ + M+   + P ++  +VL+N L K+   
Sbjct: 184 LGD---------------------LDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKM 222

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
           D   +++ +M+  G+V N   +  LI   CK+  VD   ++  +M  + + ADL TYNTL
Sbjct: 223 DDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSADLITYNTL 282

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA----RRLFRDIK 297
           I   CKKG   +A  + D M  +G+ PD +TY +LI G C+EG +  A    +R+ ++  
Sbjct: 283 IYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKE-- 340

Query: 298 GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDA 357
               + V YT LI G C+     +A ++   M + G+ P + TY  I+ + CK+G +   
Sbjct: 341 NIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTG 400

Query: 358 NRLLNEMNEKKIAPDNVT 375
           ++LL EM      P  VT
Sbjct: 401 SKLLKEMQRDGYMPSVVT 418



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 96/344 (27%), Positives = 156/344 (45%), Gaps = 45/344 (13%)

Query: 232 RADLFTYNTLIALYCKKGMHYEALA-VQDRMEREGISP-----------------DIVTY 273
           R  L +Y T+I   C   M  EA   +Q  + R+G                    DI  +
Sbjct: 10  RHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVF 69

Query: 274 NSLIHGFCREGRMREARRLFRDIKGATPNH---VTYTTLIDGYCRANDLEEALRLREVMA 330
           + LI  +   G +R+A   +R     T  H   V + T     CR   LE  ++L+    
Sbjct: 70  SGLITAYLESGFLRDAIECYR----LTKEHKFRVPFDT-----CRKV-LEHLMKLKYFKL 119

Query: 331 AKGVY---------PGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
             G Y           +  +N ++    KEG IR A  + + + +  + P  V+ NTL+N
Sbjct: 120 VWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMN 179

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
            Y K+GD     ++KN M  +G+  D +TY  LI+G CK  +MD A EL   MLD G  P
Sbjct: 180 GYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVP 239

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
           +  +++ L+DG+C     +  +++  + +S+ L  D+  Y  LI   CKK  +  AQ L 
Sbjct: 240 NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQDLI 299

Query: 502 NLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
           + M   G+  D + YT+L     + G+ +   +     YR+R++
Sbjct: 300 DEMSMKGLKPDKITYTTLIDGNCKEGDLETAFE-----YRKRMI 338


>gi|255660802|gb|ACU25570.1| pentatricopeptide repeat-containing protein [Glandularia
           microphylla]
          Length = 418

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 116/404 (28%), Positives = 219/404 (54%), Gaps = 3/404 (0%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS-VLNALVKIHDDPDGNSH 131
            ++H+LQS+ +MIH L  ++    A+ +++ +  R    + S V   +++       + +
Sbjct: 8   TFRHTLQSYCSMIHFLCTHQMIPEAKTLIQIVVSRKGKGSASAVFAEILETKGTQTSDIY 67

Query: 132 VLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKM 191
           V S L+  Y      +D ++ +   + H        C  +L  L K +   +VW  Y++ 
Sbjct: 68  VFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEES 127

Query: 192 VQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMH 251
           ++ G  A+++ +N+L+H+  K  ++   + +   +    +R  + ++NTL+  Y K G  
Sbjct: 128 LECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDL 187

Query: 252 YEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTL 309
            E   +++ M+  G+ PD+ TY+ LI+G C+E +M +A  LF ++   G  PN VT+TTL
Sbjct: 188 DEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTL 247

Query: 310 IDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI 369
           IDG+C+   +  A+ + + M ++ + P ++TYN+++  LCK+G ++ A  L++EM+ K +
Sbjct: 248 IDGHCKNGRVVLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGL 307

Query: 370 APDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKE 429
            PD +T  TLI+  CK GD  +A++ + RM++  + LD   Y ALI G C+      A++
Sbjct: 308 KPDKITYTTLIDGSCKEGDLETALEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEK 367

Query: 430 LLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
           +L  ML  G  P   +Y+ +++ +C K +     KLL E    G
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 91/279 (32%), Positives = 149/279 (53%), Gaps = 2/279 (0%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           G    +  +N L+H F +EG +R A+ +F  I   G  P+ V++ TL++GY +  DL+E 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEG 190

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            RL+  M A GV P V TY+ ++  LCKE ++ DAN L +EM +  + P+ VT  TLI+ 
Sbjct: 191 FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDG 250

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +CK G    AM++  +ML   L  D  TY  LI+G CK  ++  A++L+  M   G  P 
Sbjct: 251 HCKNGRVVLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPD 310

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ L+DG C + + E  L+     +   + +D   Y ALI   C++ +   A+++  
Sbjct: 311 KITYTTLIDGSCKEGDLETALEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLR 370

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
            M   G+  +   YT +   + + G+    S +L +M R
Sbjct: 371 EMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQR 409



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 91/320 (28%), Positives = 152/320 (47%), Gaps = 29/320 (9%)

Query: 240 TLIALYC-KKGMHYEALAVQDRMEREGI-SPDIVTYNSLIHGFCREGRMREARRLFRDIK 297
           TLI +   +KG    +    + +E +G  + DI  ++ LI  +   G +R+A   +R   
Sbjct: 34  TLIQIVVSRKGKGSASAVFAEILETKGTQTSDIYVFSGLITAYLESGFLRDAIECYR--- 90

Query: 298 GATPNH---VTYTTLIDGYCRANDLEEALRLREVMAAKGVY---------PGVVTYNSIL 345
             T  H   V + T     CR   LE  ++L+      G Y           +  +N ++
Sbjct: 91  -LTKEHKFRVPFDT-----CRKV-LEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILM 143

Query: 346 RKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLM 405
               KEG IR A  + + + +  + P  V+ NTL+N Y K+GD     ++KN M  +G+ 
Sbjct: 144 HSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQ 203

Query: 406 LDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKL 465
            D +TY  LI+G CK  +MD A EL   MLD G  P+  +++ L+DG+C        +++
Sbjct: 204 PDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVVLAMEI 263

Query: 466 LDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWR 525
             + +S+ L  D+  Y  LI   CKK  +  AQ L + M   G+  D + YT+L     +
Sbjct: 264 YKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCK 323

Query: 526 AGEPKACSDILDDMYRRRLM 545
            G+ +   +     YR+R++
Sbjct: 324 EGDLETALE-----YRKRMI 338



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 89/317 (28%), Positives = 150/317 (47%), Gaps = 29/317 (9%)

Query: 66  WAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKI---ALRDFLSTPSVLNALVKI 122
           + ES    Y  SL     ++H   K    + AQ++ + I    LR     PSV++     
Sbjct: 124 YEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLR-----PSVVS----- 173

Query: 123 HDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTD 182
                      + L+  Y  L    +G ++ + M+   + P ++  +VL+N L K+   D
Sbjct: 174 ----------FNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMD 223

Query: 183 MVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLI 242
              +++ +M+  G+V N   +  LI   CK+  V    ++  +M  + +  DL TYNTLI
Sbjct: 224 DANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVVLAMEIYKQMLSQSLSPDLITYNTLI 283

Query: 243 ALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA----RRLFRDIKG 298
              CKKG   +A  + D M  +G+ PD +TY +LI G C+EG +  A    +R+ ++   
Sbjct: 284 YGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETALEYRKRMIKE--N 341

Query: 299 ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDAN 358
              + V YT LI G C+     +A ++   M + G+ P + TY  I+ + CK+G +   +
Sbjct: 342 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGS 401

Query: 359 RLLNEMNEKKIAPDNVT 375
           +LL EM      P  VT
Sbjct: 402 KLLKEMQRDGYVPSVVT 418


>gi|255548994|ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545497|gb|EEF47002.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 927

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 155/518 (29%), Positives = 244/518 (47%), Gaps = 51/518 (9%)

Query: 99  NMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRV 158
           NM+E + L+D + +  V   +V           V + LV  Y         L+ FD+M  
Sbjct: 329 NMVEALRLKDEMVSCGVQMNVV-----------VATTLVKGYCKQDKLVSALEFFDKMNE 377

Query: 159 HNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDK 218
           +   P+     VL+    K+      + +Y +M    +   + + N LI    K    ++
Sbjct: 378 NGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESREE 437

Query: 219 VEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIH 278
             KL  E    D+ A++FTYN+L++  CK+G   EA  +  +M  +G++P  V+YNS+I 
Sbjct: 438 ASKLFDEAVACDI-ANIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMIL 496

Query: 279 GFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYP 336
           G CR+G +  A  +F D+   G  PN +TY+ L+DGY +  D E A  + + M  + + P
Sbjct: 497 GHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVP 556

Query: 337 GVVTYNSILRKLCKEGRIRDANRLLN---------------------------------- 362
              TYN  +  LCK GR  +A  +L                                   
Sbjct: 557 SDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAY 616

Query: 363 -EMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKA 421
            EM E  ++P+ +T  TLIN +CK  +T  A+K++N M   GL LD   Y ALI GFCK 
Sbjct: 617 REMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKK 676

Query: 422 KEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVY 481
           ++++ A  L   +LD G SP+   Y+ L+ GY N NN EA L L    +  G+  D+  Y
Sbjct: 677 QDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTY 736

Query: 482 RALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
             LI    K+ ++  A  L++ M   GI+ D +IYT L       G+ +    IL +M R
Sbjct: 737 TTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMER 796

Query: 542 RRLMITLKIYRSFSASYAKDNEILDLFWSH--VVDRGL 577
             +   + IY +  A + K   + + F  H  ++D+GL
Sbjct: 797 DSITPNVPIYNALIAGHFKAGNLQEAFRLHNEMLDKGL 834



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 175/723 (24%), Positives = 303/723 (41%), Gaps = 154/723 (21%)

Query: 8   NSDTKFIKTISAIMLKGHWAKLLNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWA 67
           + D+ F + +  I LK    +L  P  AS  +  A   V+  L +    P  +  +FK  
Sbjct: 53  SQDSNFSENL--IFLKSRQVELTKP--ASQDSVLARTNVIDTLLSYKRDPYSALTYFKQL 108

Query: 68  ESAVPNYKHSLQSHWTMIHILTKNKH-FKSAQNMLEKIALRDFLSTPSVL-NALVKIHD- 124
           E     +  SL S   ++HILT++    K AQN+L +    D    P++L +  +     
Sbjct: 109 E-CTRGFVRSLDSLCVLLHILTRSSETLKQAQNLLNRFISGDSGPMPNILVDHFIGSTKR 167

Query: 125 -DPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDM 183
            D D +  + ++L+  Y       D +  F+++   +++P +     LL +L K+ +   
Sbjct: 168 FDFDSDIRIYNYLLNSYIKANKLNDAIGCFNRLVESDIVPWIKFLNFLLTALVKNDMIYE 227

Query: 184 VWKVYKKMVQLGVVAN---IHL--------------------------------YNVLIH 208
             +VY+KMV  GV  +   +H+                                Y+++I 
Sbjct: 228 AREVYEKMVLKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQ 287

Query: 209 ACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISP 268
           A CK+ DV+    LL +M  K       T+ ++I    K+G   EAL ++D M   G+  
Sbjct: 288 AFCKNLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQM 347

Query: 269 DIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLR 326
           ++V   +L+ G+C++ ++  A   F  +   G +PN VTY  LI+  C+  ++ +A  L 
Sbjct: 348 NVVVATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLY 407

Query: 327 EVMAAKGVYPGV----------------------------------VTYNSILRKLCKEG 352
             M  K + P V                                   TYNS+L  LCKEG
Sbjct: 408 TQMKNKNICPTVFIVNSLIRGFLKVESREEASKLFDEAVACDIANIFTYNSLLSWLCKEG 467

Query: 353 RIRDANRLLNEMNEKKIAPDNVTCNTLINAYC---------------------------- 384
           ++ +A  L  +M +K +AP  V+ N++I  +C                            
Sbjct: 468 KMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYS 527

Query: 385 -------KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA 437
                  K GDT  A  V +RM++  ++   FTY   I+G CK      A+++L   ++ 
Sbjct: 528 ILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEK 587

Query: 438 GF-----------------------------------SPSYCSYSWLVDGYCNKNNEEAL 462
           GF                                   SP+  +Y+ L++G+C  NN +  
Sbjct: 588 GFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLA 647

Query: 463 LKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYA 522
           LK+ +E  ++GL +D++ Y ALI  FCKK+ ++ A  LF+ +   G+  +SVIY SL   
Sbjct: 648 LKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISG 707

Query: 523 YWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI---LDLFWSHVVDRGLMS 579
           Y      +A  ++   M    +   L+ Y +      K+  +   LDL+ S +  +G++ 
Sbjct: 708 YRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLY-SEMSAKGIIP 766

Query: 580 KHI 582
             I
Sbjct: 767 DII 769



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 105/348 (30%), Positives = 175/348 (50%), Gaps = 2/348 (0%)

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
           DM   V+  M+  G+  N+  Y++L+    K+ D +    +   M  +++    FTYN  
Sbjct: 505 DMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIK 564

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGA 299
           I   CK G   EA  +  +   +G  P  +TYNS++ GF +EG +  A   +R++   G 
Sbjct: 565 INGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGV 624

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
           +PN +TYTTLI+G+C+ N+ + AL++R  M  KG+   +  Y +++   CK+  I  A+ 
Sbjct: 625 SPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASW 684

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
           L +E+ +  ++P++V  N+LI+ Y  + +  +A+ ++ RML  G+  D  TY  LI G  
Sbjct: 685 LFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLL 744

Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
           K   + +A +L   M   G  P    Y+ L++G C K   E   K+L E     +  +V 
Sbjct: 745 KEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVP 804

Query: 480 VYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
           +Y ALI    K   +  A RL N M   G+  +   Y  L     + G
Sbjct: 805 IYNALIAGHFKAGNLQEAFRLHNEMLDKGLTPNDTTYDILINGKIKGG 852



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 106/323 (32%), Positives = 156/323 (48%), Gaps = 3/323 (0%)

Query: 146 TQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNV 205
           T+    VFD+M   N++P      + +N L K   T     + KK V+ G V     YN 
Sbjct: 539 TEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNS 598

Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
           ++    K   V        EM    V  ++ TY TLI  +CK      AL +++ M  +G
Sbjct: 599 IMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKG 658

Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEAL 323
           +  DI  Y +LI GFC++  +  A  LF ++   G +PN V Y +LI GY   N++E AL
Sbjct: 659 LELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAAL 718

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
            L++ M  +G+   + TY +++  L KEGR+  A  L +EM+ K I PD +    LIN  
Sbjct: 719 NLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGL 778

Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY 443
           C  G   +A K+   M    +  +   Y ALI G  KA  +  A  L   MLD G +P+ 
Sbjct: 779 CGKGQLENAQKILAEMERDSITPNVPIYNALIAGHFKAGNLQEAFRLHNEMLDKGLTPND 838

Query: 444 CSYSWLVDGYCNKNNEEALLKLL 466
            +Y  L++G   K    AL  LL
Sbjct: 839 TTYDILINGKI-KGGNSALKSLL 860



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 91/336 (27%), Positives = 162/336 (48%), Gaps = 2/336 (0%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           VF  M    L P++   ++L++   K+  T+  + V+ +MV   +V +   YN+ I+  C
Sbjct: 510 VFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLC 569

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           K     + + +L +   K       TYN+++  + K+G    AL     M   G+SP+++
Sbjct: 570 KVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVI 629

Query: 272 TYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           TY +LI+GFC+      A ++  ++  KG   +   Y  LIDG+C+  D+E A  L   +
Sbjct: 630 TYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSEL 689

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
              G+ P  V YNS++        +  A  L   M  + I+ D  T  TLI+   K G  
Sbjct: 690 LDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRL 749

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
             A+ + + M   G++ D   Y  LI+G C   +++ A+++L  M     +P+   Y+ L
Sbjct: 750 VLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVPIYNAL 809

Query: 450 VDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
           + G+    N +   +L +E + +GL  + + Y  LI
Sbjct: 810 IAGHFKAGNLQEAFRLHNEMLDKGLTPNDTTYDILI 845



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 50/173 (28%), Positives = 86/173 (49%), Gaps = 3/173 (1%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           NS + + L+  Y NL   +  L +  +M    +   L   T L++ L K+    +   +Y
Sbjct: 697 NSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLY 756

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
            +M   G++ +I +Y VLI+  C    ++  +K+L EME   +  ++  YN LIA + K 
Sbjct: 757 SEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVPIYNALIAGHFKA 816

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRL---FRDIKG 298
           G   EA  + + M  +G++P+  TY+ LI+G  + G       L   F+D KG
Sbjct: 817 GNLQEAFRLHNEMLDKGLTPNDTTYDILINGKIKGGNSALKSLLSLKFKDGKG 869


>gi|15225722|ref|NP_180822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75160493|sp|Q8S8P6.1|PP180_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g32630
 gi|20197234|gb|AAM14987.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|330253613|gb|AEC08707.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 624

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 158/530 (29%), Positives = 263/530 (49%), Gaps = 14/530 (2%)

Query: 3   SLVALNSDTKFIKTISAIML-KGHWAKLL-NPNIASSLTSTAIHKVLLNLYNCCHIPSLS 60
           S V L+SD +  + I+A ++ K    KL  NP++  +L S     VL        +P+ S
Sbjct: 23  SPVLLSSDQEAARRITACLVEKSTIGKLQSNPSLLFNLNSNVTRLVLSE----PTLPTQS 78

Query: 61  CA-FFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTP--SVLN 117
           C  FFK       N K  L +  T+ H L  N+ F   +++L  +    F   P   + +
Sbjct: 79  CIDFFKLLREFESNLKPDLTAVVTLSHRLYSNRRFNEMRSLLNSVVNDGFYKRPVEELGS 138

Query: 118 ALVK--IHDDPDGNSHVLSWLVI-FYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNS 174
           A+V   I ++          LV   Y +  M ++GL+VFD M    L     +C V L +
Sbjct: 139 AMVDCDISEEKFEFFEKFFDLVFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVA 198

Query: 175 LAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRAD 234
             K R  D+  +++++MV  GV   ++   +++   C+  +V+K +KL+ E   K ++ +
Sbjct: 199 AKKRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPE 258

Query: 235 LFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR 294
            +TYNT+I  Y K+        V   M+++G+  + VTY  L+    + G+M +A +LF 
Sbjct: 259 AYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFD 318

Query: 295 DIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEG 352
           +++  G   +   YT+LI   CR  +++ A  L + +  KG+ P   TY +++  +CK G
Sbjct: 319 EMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVG 378

Query: 353 RIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYK 412
            +  A  L+NEM  K +    V  NTLI+ YC+ G    A  + + M + G   D FT  
Sbjct: 379 EMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCN 438

Query: 413 ALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSR 472
            +   F + K  D AK+ LF M++ G   S  SY+ L+D YC + N E   +L  E  S+
Sbjct: 439 TIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSK 498

Query: 473 GLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYA 522
           G+  +   Y  +I  +CK+ K+  A++L   M+ NG+  DS  YTSL + 
Sbjct: 499 GVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHG 548



 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 36/142 (25%), Positives = 64/142 (45%)

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           L+  Y      ++  ++F +M    + P+     V++ +  K        K+   M   G
Sbjct: 475 LIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANG 534

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
           +  + + Y  LIH  C + +VD+  +L  EM  K +  +  TY  +I+   K G   EA 
Sbjct: 535 MDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAF 594

Query: 256 AVQDRMEREGISPDIVTYNSLI 277
            + D M+R+G + D   Y +LI
Sbjct: 595 GLYDEMKRKGYTIDNKVYTALI 616


>gi|223635748|sp|Q9LVQ5.2|PP432_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g55840
          Length = 1096

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 143/521 (27%), Positives = 236/521 (45%), Gaps = 39/521 (7%)

Query: 59  LSCAFFKWA-ESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLN 117
           L+  F KW  +       H +Q      HIL + + +  A+++L++++L    S+  V  
Sbjct: 52  LALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSLMSGKSS-FVFG 110

Query: 118 ALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAK 177
           AL+  +   + N  V   L+  Y    M QD L++F  M ++   P ++ C  +L S+ K
Sbjct: 111 ALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVK 170

Query: 178 DRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFT 237
                 VW   K+M++  +  ++  +N+LI+  C     +K   L+ +ME       + T
Sbjct: 171 SGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVT 230

Query: 238 YNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK 297
           YNT++  YCKKG    A+ + D M+ +G+  D+ TYN LIH  CR  R+ +   L RD++
Sbjct: 231 YNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMR 290

Query: 298 -------------------------------------GATPNHVTYTTLIDGYCRANDLE 320
                                                G +PNHVT+  LIDG+    + +
Sbjct: 291 KRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFK 350

Query: 321 EALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLI 380
           EAL++  +M AKG+ P  V+Y  +L  LCK      A      M    +    +T   +I
Sbjct: 351 EALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMI 410

Query: 381 NAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFS 440
           +  CK G    A+ + N M + G+  D  TY ALI+GFCK      AKE++  +   G S
Sbjct: 411 DGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLS 470

Query: 441 PSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRL 500
           P+   YS L+   C     +  +++ +  +  G   D   +  L+   CK  KV  A+  
Sbjct: 471 PNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEF 530

Query: 501 FNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
              M  +GIL ++V +  L   Y  +GE      + D+M +
Sbjct: 531 MRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTK 571



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 140/560 (25%), Positives = 235/560 (41%), Gaps = 72/560 (12%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHV 132
            Y  ++ ++ T++H   K   FK+A  +L+ +  +   +     N L  IHD    N   
Sbjct: 223 GYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNML--IHDLCRSNRIA 280

Query: 133 LSWLVI--------------------FYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLL 172
             +L++                     ++N        Q+ ++M    L P+     V  
Sbjct: 281 KGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPN----HVTF 336

Query: 173 NSLAKDRLTDMVWKVYKKMVQL----GVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEF 228
           N+L    +++  +K   KM  +    G+  +   Y VL+   CK+++ D        M+ 
Sbjct: 337 NALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKR 396

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
             V     TY  +I   CK G   EA+ + + M ++GI PDIVTY++LI+GFC+ GR + 
Sbjct: 397 NGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKT 456

Query: 289 AR----RLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSI 344
           A+    R++R   G +PN + Y+TLI   CR   L+EA+R+ E M  +G      T+N +
Sbjct: 457 AKEIVCRIYR--VGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVL 514

Query: 345 LRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGL 404
           +  LCK G++ +A   +  M    I P+ V+ + LIN Y   G+   A  V + M + G 
Sbjct: 515 VTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGH 574

Query: 405 MLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLK 464
               FTY +L+ G CK   +  A++ L  +     +     Y+ L+   C   N    + 
Sbjct: 575 HPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVS 634

Query: 465 LLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG-ILGDSVIYTSLAYAY 523
           L  E V R +  D   Y +LI   C+K K   A       +  G +L + V+YT      
Sbjct: 635 LFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGM 694

Query: 524 WRAGEPKA-----------------------------------CSDILDDMYRRRLMITL 548
           ++AG+ KA                                    +D+L +M  +     L
Sbjct: 695 FKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNL 754

Query: 549 KIYRSFSASYAKDNEILDLF 568
             Y      Y+K  ++   F
Sbjct: 755 TTYNILLHGYSKRKDVSTSF 774



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 113/421 (26%), Positives = 193/421 (45%), Gaps = 39/421 (9%)

Query: 195 GVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEA 254
           GV A++  YN+LIH  C+S+ + K   LL +M  + +  +  TYNTLI  +  +G    A
Sbjct: 258 GVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIA 317

Query: 255 LAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF--RDIKGATPNHV-------- 304
             + + M   G+SP+ VT+N+LI G   EG  +EA ++F   + KG TP+ V        
Sbjct: 318 SQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDG 377

Query: 305 ---------------------------TYTTLIDGYCRANDLEEALRLREVMAAKGVYPG 337
                                      TYT +IDG C+   L+EA+ L   M+  G+ P 
Sbjct: 378 LCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPD 437

Query: 338 VVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKN 397
           +VTY++++   CK GR + A  ++  +    ++P+ +  +TLI   C++G    A+++  
Sbjct: 438 IVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYE 497

Query: 398 RMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKN 457
            M+  G   D FT+  L+   CKA ++  A+E +  M   G  P+  S+  L++GY N  
Sbjct: 498 AMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSG 557

Query: 458 NEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYT 517
                  + DE    G       Y +L++  CK   +  A++    +       D+V+Y 
Sbjct: 558 EGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYN 617

Query: 518 SLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNE--ILDLFWSHVVDR 575
           +L  A  ++G       +  +M +R ++     Y S  +   +  +  I  LF      R
Sbjct: 618 TLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEAR 677

Query: 576 G 576
           G
Sbjct: 678 G 678



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 93/392 (23%), Positives = 172/392 (43%), Gaps = 3/392 (0%)

Query: 156 MRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSD 215
           M    ++P+  +   L+N           + V+ +M ++G       Y  L+   CK   
Sbjct: 534 MTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGH 593

Query: 216 VDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNS 275
           + + EK L  +       D   YNTL+   CK G   +A+++   M +  I PD  TY S
Sbjct: 594 LREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTS 653

Query: 276 LIHGFCREGRMREARRLFRDIKG---ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAK 332
           LI G CR+G+   A    ++ +      PN V YT  +DG  +A   +  +  RE M   
Sbjct: 654 LISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNL 713

Query: 333 GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
           G  P +VT N+++    + G+I   N LL EM  +   P+  T N L++ Y K  D +++
Sbjct: 714 GHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTS 773

Query: 393 MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
             +   ++  G++ D+ T  +L+ G C++  ++I  ++L   +  G      +++ L+  
Sbjct: 774 FLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISK 833

Query: 453 YCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGD 512
            C          L+    S G+ +D     A++    +  +   ++ + + M   GI  +
Sbjct: 834 CCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPE 893

Query: 513 SVIYTSLAYAYWRAGEPKACSDILDDMYRRRL 544
           S  Y  L     R G+ K    + ++M   ++
Sbjct: 894 SRKYIGLINGLCRVGDIKTAFVVKEEMIAHKI 925



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 101/355 (28%), Positives = 157/355 (44%), Gaps = 39/355 (10%)

Query: 238 YNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI- 296
           Y+ LI +Y ++GM  ++L +   M   G +P + T N+++    + G         +++ 
Sbjct: 126 YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEML 185

Query: 297 -KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIR 355
            +   P+  T+  LI+  C     E++  L + M   G  P +VTYN++L   CK+GR +
Sbjct: 186 KRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFK 245

Query: 356 DA-----------------------------NR------LLNEMNEKKIAPDNVTCNTLI 380
            A                             NR      LL +M ++ I P+ VT NTLI
Sbjct: 246 AAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLI 305

Query: 381 NAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFS 440
           N +   G    A ++ N ML  GL  +  T+ ALI G         A ++ + M   G +
Sbjct: 306 NGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLT 365

Query: 441 PSYCSYSWLVDGYCNKNNEEALLKLLDEFVSR-GLCVDVSVYRALIRRFCKKEKVDYAQR 499
           PS  SY  L+DG C KN E  L +     + R G+CV    Y  +I   CK   +D A  
Sbjct: 366 PSEVSYGVLLDGLC-KNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVV 424

Query: 500 LFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSF 554
           L N M  +GI  D V Y++L   + + G  K   +I+  +YR  L     IY + 
Sbjct: 425 LLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTL 479



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 119/531 (22%), Positives = 200/531 (37%), Gaps = 109/531 (20%)

Query: 129  NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
            N+     L+  Y N         VFD+M      P       LL  L K        K  
Sbjct: 542  NTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFL 601

Query: 189  KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
            K +  +    +  +YN L+ A CKS ++ K   L  EM  + +  D +TY +LI+  C+K
Sbjct: 602  KSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRK 661

Query: 249  GMHYEALAV------------------------------------QDRMEREGISPDIVT 272
            G    A+                                      +++M+  G +PDIVT
Sbjct: 662  GKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVT 721

Query: 273  YNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGY----------------- 313
             N++I G+ R G++ +   L  ++  +   PN  TY  L+ GY                 
Sbjct: 722  TNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSII 781

Query: 314  ------------------CRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEG--- 352
                              C +N LE  L++ +    +GV     T+N ++ K C  G   
Sbjct: 782  LNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEIN 841

Query: 353  --------------------------------RIRDANRLLNEMNEKKIAPDNVTCNTLI 380
                                            R +++  +L+EM+++ I+P++     LI
Sbjct: 842  WAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLI 901

Query: 381  NAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFS 440
            N  C++GD  +A  VK  M+   +        A++    K  + D A  LL  ML     
Sbjct: 902  NGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLV 961

Query: 441  PSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRL 500
            P+  S++ L+   C   N    L+L     + GL +D+  Y  LI   C K  +  A  L
Sbjct: 962  PTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFEL 1021

Query: 501  FNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSD-ILDDMYRRRLMITLKI 550
            +  M+G+G L ++  Y +L           + +D IL D+  R  + ++ +
Sbjct: 1022 YEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLLARGFITSMSL 1072


>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 695

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 152/527 (28%), Positives = 255/527 (48%), Gaps = 39/527 (7%)

Query: 13  FIKTISAIMLKGHWA-------KLLNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFK 65
           F K + AI+  GH+        +L +  I+ S+   A   +L+N Y   H    + AF  
Sbjct: 58  FDKLLGAIVRMGHYPTAISLFTQLQSKGISPSI---ATFTILINCY--FHQSHTAFAFSL 112

Query: 66  WAESAVPNYKHSLQSHWTMIHILTKN----KHFKSAQNMLEKIALRDFLSTPSVLNALVK 121
            A      Y+ +L +  T+I+    N    K     QN+L +  L D  +  +++N L K
Sbjct: 113 LATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSK 172

Query: 122 IHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLT 181
                  N  +              +  L +  +M   ++ P+L   + L++ L KD   
Sbjct: 173 -------NGQI--------------KAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFV 211

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
                +  ++ + G++ +   YN LI  CC      +V +LL +M  ++V  D +T+N L
Sbjct: 212 SDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNIL 271

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGA 299
           I   CK+G   EA  V   M + G  PDIVTYN+L+ G+C    + EAR LF  +  +G 
Sbjct: 272 IDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGL 331

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
            P+ + Y  LIDGYC+   ++EA+ L + +  K + P + +YNS++  LC  GRI    +
Sbjct: 332 EPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKK 391

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
           LL+EM+     PD VT N LI+A CK G    A+ V   M++ G+  +  TY A++ G+C
Sbjct: 392 LLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYC 451

Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
               +++AK++   M+ +G  P   +Y+ L++GYC     +  + L  E   + L  D++
Sbjct: 452 LRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIA 511

Query: 480 VYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRA 526
            Y +LI   C   ++ + Q L + M  +G   D + Y  L  A+ + 
Sbjct: 512 SYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKT 558



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 138/500 (27%), Positives = 227/500 (45%), Gaps = 17/500 (3%)

Query: 93  HFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQV 152
           HF+  QN  +    R+     +  N +V++   P   + V   L+     +      + +
Sbjct: 21  HFQ-PQNPHKNCRFRNVDDAVTCFNRMVRVFPPPP--TSVFDKLLGAIVRMGHYPTAISL 77

Query: 153 FDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCK 212
           F Q++   + P +   T+L+N       T   + +   +++ G   N+  +N +I+  C 
Sbjct: 78  FTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCI 137

Query: 213 SSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVT 272
           +  + K       +  +    D FTY TLI    K G    AL +   ME+  + P++V 
Sbjct: 138 NGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVM 197

Query: 273 YNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMA 330
           Y++LI G C++G + +A  L   I  +G   + VTY +LIDG C     +E  +L   M 
Sbjct: 198 YSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMV 257

Query: 331 AKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTA 390
            + V P   T+N ++  LCKEGRI +A  +L  M+++   PD VT N L+  YC   +  
Sbjct: 258 RENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVH 317

Query: 391 SAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLV 450
            A ++ NRM++ GL  D   Y  LI G+CK K +D A  L   + +    P+  SY+ L+
Sbjct: 318 EARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLI 377

Query: 451 DGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGIL 510
           DG CN      + KLLDE        DV  Y  LI   CK+ ++  A  +  +M   G+ 
Sbjct: 378 DGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVK 437

Query: 511 GDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWS 570
            + V Y ++   Y          DI + M +  L   +  Y      Y K         +
Sbjct: 438 PNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCK---------T 488

Query: 571 HVVDRGLMSKHIFKEMQLRN 590
            +VD  ++   +FKEM+ +N
Sbjct: 489 EMVDEAIV---LFKEMRHKN 505



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 118/403 (29%), Positives = 210/403 (52%), Gaps = 5/403 (1%)

Query: 110 LSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACT 169
           L    VL  + K  + PD  ++  + L+  Y + +   +  ++F++M    L P +    
Sbjct: 282 LEAQGVLAMMSKRGEKPDIVTY--NALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYN 339

Query: 170 VLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFK 229
           VL++   K ++ D    ++K++    +V  I  YN LI   C S  +  V+KLL EM   
Sbjct: 340 VLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGS 399

Query: 230 DVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA 289
               D+ TYN LI   CK+G   EAL V   M ++G+ P+IVTYN+++ G+C    +  A
Sbjct: 400 AQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVA 459

Query: 290 RRLF-RDIK-GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRK 347
           + +F R +K G  P+ + Y  LI+GYC+   ++EA+ L + M  K + P + +YNS++  
Sbjct: 460 KDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDG 519

Query: 348 LCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLD 407
           LC  GRI     LL+EM +   +PD +T N L++A+CK      A+ +  +++E G+  D
Sbjct: 520 LCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE-GIWPD 578

Query: 408 QFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLD 467
            +T  A++   CK +++ +A++ L  +L  G SP+  +Y+ L++  C   +    + LL 
Sbjct: 579 FYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLS 638

Query: 468 EFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGIL 510
           +        D   +  +I    ++ + D A++L   M   G++
Sbjct: 639 KMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGLV 681



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 130/459 (28%), Positives = 206/459 (44%), Gaps = 24/459 (5%)

Query: 75  KHSLQSHWTM----IHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNS 130
           K S+Q +  M    I  L K+     A  +  +I  R  L      N+L+      DG  
Sbjct: 188 KSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLI------DGCC 241

Query: 131 HVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKK 190
            V  W           Q+  Q+  +M   N+ P  +   +L+++L K+        V   
Sbjct: 242 SVGRW-----------QEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAM 290

Query: 191 MVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGM 250
           M + G   +I  YN L+   C   +V +  +L   M  + +  D+  YN LI  YCK  M
Sbjct: 291 MSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKM 350

Query: 251 HYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGAT--PNHVTYTT 308
             EA+ +   +  + + P I +YNSLI G C  GR+   ++L  ++ G+   P+ VTY  
Sbjct: 351 VDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNI 410

Query: 309 LIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKK 368
           LID  C+   + EAL +  +M  KGV P +VTYN+++   C    +  A  + N M +  
Sbjct: 411 LIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSG 470

Query: 369 IAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAK 428
           + PD +  N LIN YCK      A+ +   M    L+ D  +Y +LI G C    +   +
Sbjct: 471 LEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQ 530

Query: 429 ELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRF 488
           ELL  M D+G SP   +Y+ L+D +C     +  + L  + V  G+  D     A++   
Sbjct: 531 ELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIV-EGIWPDFYTNHAIVDNL 589

Query: 489 CKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
           CK EK+  A+     +  +G   +   YT L  A  + G
Sbjct: 590 CKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDG 628



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 113/371 (30%), Positives = 178/371 (47%), Gaps = 2/371 (0%)

Query: 171 LLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKD 230
           L+N L+K+        + ++M +  V  N+ +Y+ LI   CK   V     L  ++  + 
Sbjct: 166 LINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERG 225

Query: 231 VRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREAR 290
           +  D  TYN+LI   C  G   E   +  +M RE + PD  T+N LI   C+EGR+ EA+
Sbjct: 226 ILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQ 285

Query: 291 RLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
            +   +  +G  P+ VTY  L++GYC   ++ EA  L   M  +G+ P V+ YN ++   
Sbjct: 286 GVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGY 345

Query: 349 CKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ 408
           CK   + +A  L  E+  K + P   + N+LI+  C  G  +   K+ + M  +    D 
Sbjct: 346 CKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDV 405

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
            TY  LI   CK   +  A  +L  M+  G  P+  +Y+ ++DGYC +NN      + + 
Sbjct: 406 VTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNR 465

Query: 469 FVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
            V  GL  D+  Y  LI  +CK E VD A  LF  M+   ++ D   Y SL       G 
Sbjct: 466 MVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGR 525

Query: 529 PKACSDILDDM 539
                ++LD+M
Sbjct: 526 IPHVQELLDEM 536


>gi|255660820|gb|ACU25579.1| pentatricopeptide repeat-containing protein [Mulguraea
           asparagoides]
          Length = 418

 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 116/404 (28%), Positives = 217/404 (53%), Gaps = 3/404 (0%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS-VLNALVKIHDDPDGNSH 131
            ++H+LQS+ TMIH L  ++    A+ +++ +  R    + S V  A+++       + +
Sbjct: 8   TFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIY 67

Query: 132 VLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKM 191
           V S L+  Y      +D ++ +   + H        C  ++  L K +   +VW  Y++ 
Sbjct: 68  VFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWGFYEES 127

Query: 192 VQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMH 251
           ++ G  A+++ +N+L+H  CK  ++   + +   +    +R  + ++NTL+  Y K G  
Sbjct: 128 LECGYPASLYFFNILMHNFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDL 187

Query: 252 YEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTL 309
            E   ++  M+  G+ PD+ T++ LI+G C+E +M +A  LF ++   G  PN VT+TTL
Sbjct: 188 DEGFRLKSVMQASGVQPDVYTHSVLINGLCKESKMDDANELFDEMLBNGLVPNGVTFTTL 247

Query: 310 IDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI 369
           IDG+C+   ++ A+ +   M ++ + P ++TYN+++  LCK+G ++    L++EM+ K +
Sbjct: 248 IDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQXXDLIDEMSMKGL 307

Query: 370 APDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKE 429
            PD +T  TLI+  CK GD  +A + + RM++  + LD   Y ALI G C+      A++
Sbjct: 308 KPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDXAYTALISGLCQEGRSVDAEK 367

Query: 430 LLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
           +L  ML  G  P   +Y+ +++ +C K +     KLL E    G
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRXG 411



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 90/279 (32%), Positives = 149/279 (53%), Gaps = 2/279 (0%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           G    +  +N L+H FC+EG +R A+ +F  I   G  P+ V++ TL++GY +  DL+E 
Sbjct: 131 GYPASLYFFNILMHNFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEG 190

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            RL+ VM A GV P V T++ ++  LCKE ++ DAN L +EM +  + P+ VT  TLI+ 
Sbjct: 191 FRLKSVMQASGVQPDVYTHSVLINGLCKESKMDDANELFDEMLBNGLVPNGVTFTTLIDG 250

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +CK G    AM++  +ML   L+ D  TY  LI+G CK  ++    +L+  M   G  P 
Sbjct: 251 HCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQXXDLIDEMSMKGLKPD 310

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ L+DG C + + E   +     +   + +D   Y ALI   C++ +   A+++  
Sbjct: 311 KITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDXAYTALISGLCQEGRSVDAEKMLR 370

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
            M   G+  +   YT +   + + G+    S +L +M R
Sbjct: 371 EMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQR 409



 Score =  125 bits (313), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 87/318 (27%), Positives = 149/318 (46%), Gaps = 31/318 (9%)

Query: 66  WAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKI---ALR-DFLSTPSVLNALVK 121
           + ES    Y  SL     ++H   K    + AQ++ + I    LR   +S  +++N  +K
Sbjct: 124 YEESLECGYPASLYFFNILMHNFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYIK 183

Query: 122 IHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLT 181
           I D                       +G ++   M+   + P ++  +VL+N L K+   
Sbjct: 184 IGD---------------------LDEGFRLKSVMQASGVQPDVYTHSVLINGLCKESKM 222

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
           D   +++ +M+  G+V N   +  LI   CK+  VD   ++  +M  + +  DL TYNTL
Sbjct: 223 DDANELFDEMLBNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTL 282

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA----RRLFRDIK 297
           I   CKKG   +   + D M  +G+ PD +TY +LI G C+EG +  A    +R+ ++  
Sbjct: 283 IYGLCKKGDLKQXXDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKE-- 340

Query: 298 GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDA 357
               +   YT LI G C+     +A ++   M + G+ P + TY  I+ + CK+G +   
Sbjct: 341 NIRLDDXAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTG 400

Query: 358 NRLLNEMNEKKIAPDNVT 375
           ++LL EM      P+ VT
Sbjct: 401 SKLLKEMQRXGYXPNXVT 418



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 92/344 (26%), Positives = 155/344 (45%), Gaps = 45/344 (13%)

Query: 232 RADLFTYNTLIALYCKKGMHYEALA-VQDRMEREGISP-----------------DIVTY 273
           R  L +Y T+I   C   M  EA   +Q  + R+G                    DI  +
Sbjct: 10  RHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVF 69

Query: 274 NSLIHGFCREGRMREARRLFRDIKGATPNH---VTYTTLIDGYCRANDLEEALRLREVMA 330
           + LI  +   G +R+A   +R     T  H   V + T     CR   +E  ++L+    
Sbjct: 70  SGLITAYLESGFLRDAIECYR----LTKEHKFRVPFDT-----CRKV-IEHLMKLKYFKL 119

Query: 331 AKGVY---------PGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
             G Y           +  +N ++   CKEG IR A  + + + +  + P  V+ NTL+N
Sbjct: 120 VWGFYEESLECGYPASLYFFNILMHNFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMN 179

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
            Y KIGD     ++K+ M  +G+  D +T+  LI+G CK  +MD A EL   MLB G  P
Sbjct: 180 GYIKIGDLDEGFRLKSVMQASGVQPDVYTHSVLINGLCKESKMDDANELFDEMLBNGLVP 239

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
           +  +++ L+DG+C     +  +++  + +S+ L  D+  Y  LI   CKK  +     L 
Sbjct: 240 NGVTFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQXXDLI 299

Query: 502 NLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
           + M   G+  D + YT+L     + G+ +   +     YR+R++
Sbjct: 300 DEMSMKGLKPDKITYTTLIDGNCKEGDLETAFE-----YRKRMI 338


>gi|8843735|dbj|BAA97283.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1274

 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 143/521 (27%), Positives = 236/521 (45%), Gaps = 39/521 (7%)

Query: 59  LSCAFFKWA-ESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLN 117
           L+  F KW  +       H +Q      HIL + + +  A+++L++++L    S+  V  
Sbjct: 52  LALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSLMSGKSS-FVFG 110

Query: 118 ALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAK 177
           AL+  +   + N  V   L+  Y    M QD L++F  M ++   P ++ C  +L S+ K
Sbjct: 111 ALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVK 170

Query: 178 DRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFT 237
                 VW   K+M++  +  ++  +N+LI+  C     +K   L+ +ME       + T
Sbjct: 171 SGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVT 230

Query: 238 YNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK 297
           YNT++  YCKKG    A+ + D M+ +G+  D+ TYN LIH  CR  R+ +   L RD++
Sbjct: 231 YNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMR 290

Query: 298 -------------------------------------GATPNHVTYTTLIDGYCRANDLE 320
                                                G +PNHVT+  LIDG+    + +
Sbjct: 291 KRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFK 350

Query: 321 EALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLI 380
           EAL++  +M AKG+ P  V+Y  +L  LCK      A      M    +    +T   +I
Sbjct: 351 EALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMI 410

Query: 381 NAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFS 440
           +  CK G    A+ + N M + G+  D  TY ALI+GFCK      AKE++  +   G S
Sbjct: 411 DGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLS 470

Query: 441 PSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRL 500
           P+   YS L+   C     +  +++ +  +  G   D   +  L+   CK  KV  A+  
Sbjct: 471 PNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEF 530

Query: 501 FNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
              M  +GIL ++V +  L   Y  +GE      + D+M +
Sbjct: 531 MRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTK 571



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 140/560 (25%), Positives = 235/560 (41%), Gaps = 72/560 (12%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHV 132
            Y  ++ ++ T++H   K   FK+A  +L+ +  +   +     N L  IHD    N   
Sbjct: 223 GYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNML--IHDLCRSNRIA 280

Query: 133 LSWLVI--------------------FYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLL 172
             +L++                     ++N        Q+ ++M    L P+     V  
Sbjct: 281 KGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPN----HVTF 336

Query: 173 NSLAKDRLTDMVWKVYKKMVQL----GVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEF 228
           N+L    +++  +K   KM  +    G+  +   Y VL+   CK+++ D        M+ 
Sbjct: 337 NALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKR 396

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
             V     TY  +I   CK G   EA+ + + M ++GI PDIVTY++LI+GFC+ GR + 
Sbjct: 397 NGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKT 456

Query: 289 AR----RLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSI 344
           A+    R++R   G +PN + Y+TLI   CR   L+EA+R+ E M  +G      T+N +
Sbjct: 457 AKEIVCRIYR--VGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVL 514

Query: 345 LRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGL 404
           +  LCK G++ +A   +  M    I P+ V+ + LIN Y   G+   A  V + M + G 
Sbjct: 515 VTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGH 574

Query: 405 MLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLK 464
               FTY +L+ G CK   +  A++ L  +     +     Y+ L+   C   N    + 
Sbjct: 575 HPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVS 634

Query: 465 LLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG-ILGDSVIYTSLAYAY 523
           L  E V R +  D   Y +LI   C+K K   A       +  G +L + V+YT      
Sbjct: 635 LFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGM 694

Query: 524 WRAGEPKA-----------------------------------CSDILDDMYRRRLMITL 548
           ++AG+ KA                                    +D+L +M  +     L
Sbjct: 695 FKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNL 754

Query: 549 KIYRSFSASYAKDNEILDLF 568
             Y      Y+K  ++   F
Sbjct: 755 TTYNILLHGYSKRKDVSTSF 774



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 113/421 (26%), Positives = 193/421 (45%), Gaps = 39/421 (9%)

Query: 195 GVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEA 254
           GV A++  YN+LIH  C+S+ + K   LL +M  + +  +  TYNTLI  +  +G    A
Sbjct: 258 GVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIA 317

Query: 255 LAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF--RDIKGATPNHV-------- 304
             + + M   G+SP+ VT+N+LI G   EG  +EA ++F   + KG TP+ V        
Sbjct: 318 SQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDG 377

Query: 305 ---------------------------TYTTLIDGYCRANDLEEALRLREVMAAKGVYPG 337
                                      TYT +IDG C+   L+EA+ L   M+  G+ P 
Sbjct: 378 LCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPD 437

Query: 338 VVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKN 397
           +VTY++++   CK GR + A  ++  +    ++P+ +  +TLI   C++G    A+++  
Sbjct: 438 IVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYE 497

Query: 398 RMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKN 457
            M+  G   D FT+  L+   CKA ++  A+E +  M   G  P+  S+  L++GY N  
Sbjct: 498 AMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSG 557

Query: 458 NEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYT 517
                  + DE    G       Y +L++  CK   +  A++    +       D+V+Y 
Sbjct: 558 EGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYN 617

Query: 518 SLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNE--ILDLFWSHVVDR 575
           +L  A  ++G       +  +M +R ++     Y S  +   +  +  I  LF      R
Sbjct: 618 TLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEAR 677

Query: 576 G 576
           G
Sbjct: 678 G 678



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 93/392 (23%), Positives = 172/392 (43%), Gaps = 3/392 (0%)

Query: 156 MRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSD 215
           M    ++P+  +   L+N           + V+ +M ++G       Y  L+   CK   
Sbjct: 534 MTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGH 593

Query: 216 VDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNS 275
           + + EK L  +       D   YNTL+   CK G   +A+++   M +  I PD  TY S
Sbjct: 594 LREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTS 653

Query: 276 LIHGFCREGRMREARRLFRDIKG---ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAK 332
           LI G CR+G+   A    ++ +      PN V YT  +DG  +A   +  +  RE M   
Sbjct: 654 LISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNL 713

Query: 333 GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
           G  P +VT N+++    + G+I   N LL EM  +   P+  T N L++ Y K  D +++
Sbjct: 714 GHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTS 773

Query: 393 MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
             +   ++  G++ D+ T  +L+ G C++  ++I  ++L   +  G      +++ L+  
Sbjct: 774 FLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISK 833

Query: 453 YCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGD 512
            C          L+    S G+ +D     A++    +  +   ++ + + M   GI  +
Sbjct: 834 CCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPE 893

Query: 513 SVIYTSLAYAYWRAGEPKACSDILDDMYRRRL 544
           S  Y  L     R G+ K    + ++M   ++
Sbjct: 894 SRKYIGLINGLCRVGDIKTAFVVKEEMIAHKI 925



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 101/355 (28%), Positives = 157/355 (44%), Gaps = 39/355 (10%)

Query: 238 YNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI- 296
           Y+ LI +Y ++GM  ++L +   M   G +P + T N+++    + G         +++ 
Sbjct: 126 YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEML 185

Query: 297 -KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIR 355
            +   P+  T+  LI+  C     E++  L + M   G  P +VTYN++L   CK+GR +
Sbjct: 186 KRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFK 245

Query: 356 DA-----------------------------NR------LLNEMNEKKIAPDNVTCNTLI 380
            A                             NR      LL +M ++ I P+ VT NTLI
Sbjct: 246 AAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLI 305

Query: 381 NAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFS 440
           N +   G    A ++ N ML  GL  +  T+ ALI G         A ++ + M   G +
Sbjct: 306 NGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLT 365

Query: 441 PSYCSYSWLVDGYCNKNNEEALLKLLDEFVSR-GLCVDVSVYRALIRRFCKKEKVDYAQR 499
           PS  SY  L+DG C KN E  L +     + R G+CV    Y  +I   CK   +D A  
Sbjct: 366 PSEVSYGVLLDGLC-KNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVV 424

Query: 500 LFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSF 554
           L N M  +GI  D V Y++L   + + G  K   +I+  +YR  L     IY + 
Sbjct: 425 LLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTL 479



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 119/531 (22%), Positives = 200/531 (37%), Gaps = 109/531 (20%)

Query: 129  NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
            N+     L+  Y N         VFD+M      P       LL  L K        K  
Sbjct: 542  NTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFL 601

Query: 189  KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
            K +  +    +  +YN L+ A CKS ++ K   L  EM  + +  D +TY +LI+  C+K
Sbjct: 602  KSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRK 661

Query: 249  GMHYEALAV------------------------------------QDRMEREGISPDIVT 272
            G    A+                                      +++M+  G +PDIVT
Sbjct: 662  GKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVT 721

Query: 273  YNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGY----------------- 313
             N++I G+ R G++ +   L  ++  +   PN  TY  L+ GY                 
Sbjct: 722  TNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSII 781

Query: 314  ------------------CRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEG--- 352
                              C +N LE  L++ +    +GV     T+N ++ K C  G   
Sbjct: 782  LNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEIN 841

Query: 353  --------------------------------RIRDANRLLNEMNEKKIAPDNVTCNTLI 380
                                            R +++  +L+EM+++ I+P++     LI
Sbjct: 842  WAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLI 901

Query: 381  NAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFS 440
            N  C++GD  +A  VK  M+   +        A++    K  + D A  LL  ML     
Sbjct: 902  NGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLV 961

Query: 441  PSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRL 500
            P+  S++ L+   C   N    L+L     + GL +D+  Y  LI   C K  +  A  L
Sbjct: 962  PTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFEL 1021

Query: 501  FNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSD-ILDDMYRRRLMITLKI 550
            +  M+G+G L ++  Y +L           + +D IL D+  R  + ++ +
Sbjct: 1022 YEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLLARGFITSMSL 1072


>gi|255660812|gb|ACU25575.1| pentatricopeptide repeat-containing protein [Glandularia incisa]
          Length = 418

 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 118/409 (28%), Positives = 219/409 (53%), Gaps = 3/409 (0%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS-VLNALVKIHDDPDGNSH 131
            ++H+LQS+ TMIH L  ++    A+ +++ +  R    + S V  A+++       + +
Sbjct: 8   TFRHTLQSYCTMIHFLCTHQMIPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQISDIY 67

Query: 132 VLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKM 191
           V S L+  Y      +D ++ +   + H        C  +L  L K +   +VW  Y++ 
Sbjct: 68  VFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEES 127

Query: 192 VQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMH 251
           ++ G  A+++ +N+L+H+  K  ++   + +   +    +R  + ++NTL+  Y K G  
Sbjct: 128 LECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGNL 187

Query: 252 YEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTL 309
            E   +++ M+  G+ PD+ TY+ LI+G C+E +M +A  LF ++   G  PN VT+TTL
Sbjct: 188 DEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTL 247

Query: 310 IDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI 369
           IDG+C+   ++ A+ + + M ++ + P ++TYN+++  LCK+G ++ A  L +EM+ K +
Sbjct: 248 IDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGL 307

Query: 370 APDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKE 429
            PD +T  TLI+  CK G   +A + + RM++  + LD   Y ALI G C+      A++
Sbjct: 308 KPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEK 367

Query: 430 LLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDV 478
           +L  ML  G  P   +Y+ +++ +C K +     KLL E    G    V
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYAPSV 416



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 89/279 (31%), Positives = 147/279 (52%), Gaps = 2/279 (0%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           G    +  +N L+H F +EG +R A+ +F  I   G  P+ V++ TL++GY +  +L+E 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGNLDEG 190

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            RL+  M A GV P V TY+ ++  LCKE ++ DAN L +EM +  + P+ VT  TLI+ 
Sbjct: 191 FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDG 250

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +CK G    AM++  +ML   L  D  TY  LI+G CK  ++  A++L   M   G  P 
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPD 310

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ L+DG C + + E   +     +   + +D   Y ALI   C++ +   A+++  
Sbjct: 311 KITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLR 370

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
            M   G+  +   YT +   + + G+    S +L +M R
Sbjct: 371 EMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQR 409



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 91/317 (28%), Positives = 152/317 (47%), Gaps = 29/317 (9%)

Query: 66  WAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKI---ALRDFLSTPSVLNALVKI 122
           + ES    Y  SL     ++H   K    + AQ++ + I    LR     PSV++     
Sbjct: 124 YEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLR-----PSVVS----- 173

Query: 123 HDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTD 182
                      + L+  Y  L    +G ++ + M+   + P ++  +VL+N L K+   D
Sbjct: 174 ----------FNTLMNGYIKLGNLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMD 223

Query: 183 MVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLI 242
              +++ +M+  G+V N   +  LI   CK+  VD   ++  +M  + +  DL TYNTLI
Sbjct: 224 DANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLI 283

Query: 243 ALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA----RRLFRDIKG 298
              CKKG   +A  + D M  +G+ PD +TY +LI G C+EG +  A    +R+ ++   
Sbjct: 284 YGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKE--N 341

Query: 299 ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDAN 358
              + V YT LI G C+     +A ++   M + G+ P + TY  I+ + CK+G +   +
Sbjct: 342 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGS 401

Query: 359 RLLNEMNEKKIAPDNVT 375
           +LL EM     AP  VT
Sbjct: 402 KLLKEMQRDGYAPSVVT 418



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 95/344 (27%), Positives = 155/344 (45%), Gaps = 45/344 (13%)

Query: 232 RADLFTYNTLIALYCKKGMHYEALA-VQDRMEREGISP-----------------DIVTY 273
           R  L +Y T+I   C   M  EA   +Q  + R+G                    DI  +
Sbjct: 10  RHTLQSYCTMIHFLCTHQMIPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQISDIYVF 69

Query: 274 NSLIHGFCREGRMREARRLFRDIKGATPNH---VTYTTLIDGYCRANDLEEALRLREVMA 330
           + LI  +   G +R+A   +R     T  H   V + T     CR   LE  ++L+    
Sbjct: 70  SGLITAYLESGFLRDAIECYR----LTKEHKFRVPFDT-----CR-KVLEHLMKLKYFKL 119

Query: 331 AKGVY---------PGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
             G Y           +  +N ++    KEG IR A  + + + +  + P  V+ NTL+N
Sbjct: 120 VWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMN 179

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
            Y K+G+     ++KN M  +G+  D +TY  LI+G CK  +MD A EL   MLD G  P
Sbjct: 180 GYIKLGNLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVP 239

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
           +  +++ L+DG+C     +  +++  + +S+ L  D+  Y  LI   CKK  +  AQ L 
Sbjct: 240 NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLT 299

Query: 502 NLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
           + M   G+  D + YT+L     + G  +   +     YR+R++
Sbjct: 300 DEMSMKGLKPDKITYTTLIDGSCKEGHLETAFE-----YRKRMI 338


>gi|255660808|gb|ACU25573.1| pentatricopeptide repeat-containing protein [Glandularia subincana]
          Length = 418

 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 117/409 (28%), Positives = 219/409 (53%), Gaps = 3/409 (0%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS-VLNALVKIHDDPDGNSH 131
            ++H+LQS+ TMIH L  ++    A+ +++ +  R    + S V  AJ++       + +
Sbjct: 8   TFRHTLQSYCTMIHFLCTHQMIXEAKTLIQIVVSRKGKGSASAVFAAJLETKGTQISDIY 67

Query: 132 VLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKM 191
           V S L+  Y      +D ++ +   + H        C  +J  L K +   +VW  Y++ 
Sbjct: 68  VFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVJEHLMKLKYFKLVWGFYEES 127

Query: 192 VQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMH 251
           ++ G  A+++ +N+L+H+  K  ++   + +   +    +R  + ++NTL+  Y K G  
Sbjct: 128 LECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDL 187

Query: 252 YEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTL 309
            E   +++ M+  G+ PD+ TY+ LI+G C+E +M +A  LF ++   G  PN VT+TTL
Sbjct: 188 DEGFRLKNXMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTL 247

Query: 310 IDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI 369
           IDG+C+   ++ A+ + + M ++ + P ++TYN+++  LCK+G ++ A  L +EM+ K +
Sbjct: 248 IDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGL 307

Query: 370 APDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKE 429
            PD +T  TLI+  CK G   +A + + RM++  + LD   Y ALI G C+      A++
Sbjct: 308 KPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEK 367

Query: 430 LLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDV 478
           +L  ML  G  P   +Y+ +++ +C K +     KLL E    G    V
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSV 416



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 90/279 (32%), Positives = 147/279 (52%), Gaps = 2/279 (0%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           G    +  +N L+H F +EG +R A+ +F  I   G  P+ V++ TL++GY +  DL+E 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEG 190

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            RL+  M A GV P V TY+ ++  LCKE ++ DAN L +EM +  + P+ VT  TLI+ 
Sbjct: 191 FRLKNXMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDG 250

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +CK G    AM++  +ML   L  D  TY  LI+G CK  ++  A++L   M   G  P 
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPD 310

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ L+DG C + + E   +     +   + +D   Y ALI   C++ +   A+++  
Sbjct: 311 KITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLR 370

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
            M   G+  +   YT +   + + G+    S +L +M R
Sbjct: 371 EMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQR 409



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 90/317 (28%), Positives = 151/317 (47%), Gaps = 29/317 (9%)

Query: 66  WAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKI---ALRDFLSTPSVLNALVKI 122
           + ES    Y  SL     ++H   K    + AQ++ + I    LR     PSV++     
Sbjct: 124 YEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLR-----PSVVS----- 173

Query: 123 HDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTD 182
                      + L+  Y  L    +G ++ + M+   + P ++  +VL+N L K+   D
Sbjct: 174 ----------FNTLMNGYIKLGDLDEGFRLKNXMQASGVQPDVYTYSVLINGLCKESKMD 223

Query: 183 MVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLI 242
              +++ +M+  G+V N   +  LI   CK+  VD   ++  +M  + +  DL TYNTLI
Sbjct: 224 DANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLI 283

Query: 243 ALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA----RRLFRDIKG 298
              CKKG   +A  + D M  +G+ PD +TY +LI G C+EG +  A    +R+ ++   
Sbjct: 284 YGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKE--N 341

Query: 299 ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDAN 358
              + V YT LI G C+     +A ++   M + G+ P + TY  I+ + CK+G +   +
Sbjct: 342 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGS 401

Query: 359 RLLNEMNEKKIAPDNVT 375
           +LL EM      P  VT
Sbjct: 402 KLLKEMQRDGYVPSVVT 418



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 95/344 (27%), Positives = 155/344 (45%), Gaps = 45/344 (13%)

Query: 232 RADLFTYNTLIALYCKKGMHYEALA-VQDRMEREGISP-----------------DIVTY 273
           R  L +Y T+I   C   M  EA   +Q  + R+G                    DI  +
Sbjct: 10  RHTLQSYCTMIHFLCTHQMIXEAKTLIQIVVSRKGKGSASAVFAAJLETKGTQISDIYVF 69

Query: 274 NSLIHGFCREGRMREARRLFRDIKGATPNH---VTYTTLIDGYCRANDLEEALRLREVMA 330
           + LI  +   G +R+A   +R     T  H   V + T     CR   JE  ++L+    
Sbjct: 70  SGLITAYLESGFLRDAIECYR----LTKEHKFRVPFDT-----CRKV-JEHLMKLKYFKL 119

Query: 331 AKGVY---------PGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
             G Y           +  +N ++    KEG IR A  + + + +  + P  V+ NTL+N
Sbjct: 120 VWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMN 179

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
            Y K+GD     ++KN M  +G+  D +TY  LI+G CK  +MD A EL   MLD G  P
Sbjct: 180 GYIKLGDLDEGFRLKNXMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVP 239

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
           +  +++ L+DG+C     +  +++  + +S+ L  D+  Y  LI   CKK  +  AQ L 
Sbjct: 240 NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLT 299

Query: 502 NLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
           + M   G+  D + YT+L     + G  +   +     YR+R++
Sbjct: 300 DEMSMKGLKPDKITYTTLIDGSCKEGHLETAFE-----YRKRMI 338


>gi|410109945|gb|AFV61052.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           rubella]
          Length = 394

 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 119/394 (30%), Positives = 215/394 (54%), Gaps = 3/394 (0%)

Query: 78  LQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALV-KIHDDPDGNSHVLSWL 136
           L S+ TMIH L  ++    A+++++ +  R    + S + A++ +       + +V S L
Sbjct: 1   LHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAVILETKGTQRSDIYVFSGL 60

Query: 137 VIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGV 196
           +  Y      +D ++ +   R H        C  +L  L K +   +VW  YK++++ G 
Sbjct: 61  ITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYKEILESGY 120

Query: 197 VANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALA 256
            A+++ +N+L+H  CK  D+   + +   +    +R  + +YNTL+  Y + G   E   
Sbjct: 121 PASLYFFNILMHRFCKERDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFR 180

Query: 257 VQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYC 314
           ++  M   G+ PD+ TY+ LI+G C+E +M +A  LF +  +KG  PN VT+TTLIDG+C
Sbjct: 181 LKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHC 240

Query: 315 RANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNV 374
           +   ++ AL + + M ++ + P ++TYN+++  LCK+G ++ A+ L++EM+ K + PD +
Sbjct: 241 KNGRVDLALEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKI 300

Query: 375 TCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGM 434
           T   LI+  CK GD  +A + + RM++  + LD   Y ALI G C+      A+++L  M
Sbjct: 301 TYTALIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREM 360

Query: 435 LDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
           L  G  P   +Y+ +++ +C K +     KLL E
Sbjct: 361 LSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKE 394



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 90/276 (32%), Positives = 147/276 (53%), Gaps = 2/276 (0%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           G    +  +N L+H FC+E  +R A+ +F  I   G  P+ V+Y TL++GY R  DL+E 
Sbjct: 119 GYPASLYFFNILMHRFCKERDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEG 178

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            RL+  M A GV P V TY+ ++  LCKE ++ DAN L +EM  K + P+ VT  TLI+ 
Sbjct: 179 FRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDG 238

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +CK G    A+++  +ML   L+ D  TY  LI+G CK  ++  A +L+  M   G  P 
Sbjct: 239 HCKNGRVDLALEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPD 298

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ L+DG C + + +   +     +   + +D   Y ALI   C++ +   A+++  
Sbjct: 299 KITYTALIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLR 358

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDD 538
            M   G+  D+  YT +   + + G+    S +L +
Sbjct: 359 EMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKE 394



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 87/321 (27%), Positives = 146/321 (45%), Gaps = 34/321 (10%)

Query: 235 LFTYNTLIALYCKKGMHYEALA-VQDRMEREGISP-----------------DIVTYNSL 276
           L +Y T+I   C   M  EA + +Q  + R+G                    DI  ++ L
Sbjct: 1   LHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAVILETKGTQRSDIYVFSGL 60

Query: 277 IHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYP 336
           I  +   G +R+A   +R     T  H  +       CR   LE  ++L+      G Y 
Sbjct: 61  ITAYLESGFLRDAIECYR----LTREHKFWVPF--DTCRKV-LEHLMKLKYFKLVWGFYK 113

Query: 337 GVVT---------YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
            ++          +N ++ + CKE  IR A  + + + +  + P  V+ NTL+N Y ++G
Sbjct: 114 EILESGYPASLYFFNILMHRFCKERDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLG 173

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
           D     ++K+ M  +G+  D +TY  LI+G CK  +MD A EL   ML  G  P+  +++
Sbjct: 174 DLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFT 233

Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGN 507
            L+DG+C     +  L++  + +S+ L  D+  Y  LI   CKK  +  A  L + M   
Sbjct: 234 TLIDGHCKNGRVDLALEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMK 293

Query: 508 GILGDSVIYTSLAYAYWRAGE 528
           G+  D + YT+L     + G+
Sbjct: 294 GLKPDKITYTALIDGCCKEGD 314



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 79/284 (27%), Positives = 141/284 (49%), Gaps = 22/284 (7%)

Query: 62  AFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKI---ALR-DFLSTPSVLN 117
            F+K  E     Y  SL     ++H   K +  + AQ++ + I    LR   +S  +++N
Sbjct: 110 GFYK--EILESGYPASLYFFNILMHRFCKERDIRVAQSVFDAITKWGLRPSVVSYNTLMN 167

Query: 118 ALVKIHDDPDG------------NSHVLSWLVIFYANLKMTQ--DGLQVFDQMRVHNLMP 163
             +++ D  +G               V ++ V+     K ++  D  ++FD+M V  L+P
Sbjct: 168 GYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVP 227

Query: 164 HLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLL 223
           +    T L++   K+   D+  ++YK+M+   ++ ++  YN LI+  CK  D+ +   L+
Sbjct: 228 NGVTFTTLIDGHCKNGRVDLALEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLI 287

Query: 224 CEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCRE 283
            EM  K ++ D  TY  LI   CK+G    A   + RM +E I  D V Y +LI G C+E
Sbjct: 288 DEMSMKGLKPDKITYTALIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQE 347

Query: 284 GRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
           GR  +A ++ R++   G  P+  TYT +I+ +C+  D+ +  +L
Sbjct: 348 GRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKL 391


>gi|255538538|ref|XP_002510334.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223551035|gb|EEF52521.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 947

 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 156/576 (27%), Positives = 282/576 (48%), Gaps = 19/576 (3%)

Query: 12  KFIKTISAIMLKG--HWAKLLNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAES 69
           + I  IS +++ G  H  K LN   +  +  + + K+  N       P  S  FFK A S
Sbjct: 34  ELIDRISRLLVLGRYHALKDLNFQFSDYILDSVLLKLKFN-------PIASLHFFKLA-S 85

Query: 70  AVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIAL--RDFLSTPSVLNALVKIHDDPD 127
              N++ ++ SH  ++HIL++ + +   ++ L ++    ++  S+  V N LV++ +D  
Sbjct: 86  KQSNFRPNVNSHCKLVHILSRARMYDETRSYLNELVTPSKNNYSSLVVWNELVRVFEDFK 145

Query: 128 GNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKV 187
            +  V   ++  Y    M ++ L VFD M     +P L +C  LL+SL +   +     V
Sbjct: 146 FSPTVFDMILKIYCEKGMIKNALHVFDNMGKLGCVPSLRSCNRLLSSLVRKGESSNAILV 205

Query: 188 YKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCK 247
           Y  + +LG+V ++   +++++A CK   V+     + EM++     ++ TYN+LI     
Sbjct: 206 YDHINRLGIVPDVFTCSIMVNAYCKDGWVNVAVDFVKEMDYLGFELNVVTYNSLIDGCVS 265

Query: 248 KGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI---KGATPNHV 304
            G    A  V   M   GI  + VT   LI G+CR+ ++ EA ++ R++   +G   +  
Sbjct: 266 IGDMERAEMVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEAEKVLREMERSEGMVLDEY 325

Query: 305 TYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM 364
            Y  LIDGYCR   +++A+RLR+ M   G+   +   N+++   CK G++ +A RLL  M
Sbjct: 326 AYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYCKNGQVSEAERLLMRM 385

Query: 365 NEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEM 424
            +  + P++ + +TL++ +C+ G    A+ V N ML  G+  +  T+ +L+ G C+    
Sbjct: 386 VDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAF 445

Query: 425 DIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRAL 484
           + A  +   ML  G +P   SY  L+D           L L ++ ++RG       +  +
Sbjct: 446 EDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTM 505

Query: 485 IRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL 544
           I  FCK EK+  A+  FN M+  G   D V Y +L   Y + G  +    + + M +  +
Sbjct: 506 INGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAI 565

Query: 545 MITLKIYRSFSASY---AKDNEILDLFWSHVVDRGL 577
           + ++++Y S         K  E++DL  S +  +GL
Sbjct: 566 LPSIELYNSLIGGLFKSKKTREVMDLL-SEMCLKGL 600



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 120/477 (25%), Positives = 209/477 (43%), Gaps = 72/477 (15%)

Query: 160 NLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKV 219
           +L P  ++ + L++   ++ L      VY +M+++G+ +N+  +N L+   C+    +  
Sbjct: 389 DLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDA 448

Query: 220 EKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHG 279
             +   M  + V  D  +Y TL+ L  K G  + ALA+ + +   G       +N++I+G
Sbjct: 449 LHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTMING 508

Query: 280 FCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAA------ 331
           FC+  +M EA   F  +K  G  P+ VTY TLIDGYC+  ++EEA +++E M        
Sbjct: 509 FCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPS 568

Query: 332 -----------------------------KGVYPGVVTYNSILRKLCKEGRIRDANRLLN 362
                                        KG+ P VVTY +++   C EGR+  A     
Sbjct: 569 IELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYF 628

Query: 363 EMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ-------------- 408
           +M EK  AP+ + C+ ++++  ++G    A  +  +M+   + LD               
Sbjct: 629 DMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVNLDVFLDHGYFDRLHKADDGNL 688

Query: 409 ---------------------FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
                                  Y   I G CK+ ++D AK++   +L  GFSP   +Y 
Sbjct: 689 DSQKIADTLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYC 748

Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGN 507
            L+ GY    N      L DE + RGL  ++  Y ALI   CK   +D AQ+LF+ +   
Sbjct: 749 TLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKLHLK 808

Query: 508 GILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
           G+  + + Y  L   Y + G  +   D+ + M +  +  +L  Y +    + K  ++
Sbjct: 809 GLAPNVISYNILIDGYCKNGNTREALDLRNKMLKEGISPSLITYSALIYGFCKQGDM 865



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 122/468 (26%), Positives = 204/468 (43%), Gaps = 76/468 (16%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           +D L V+  M    + P   +   LL+ L K         ++  ++  G   + + +N +
Sbjct: 446 EDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTM 505

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMERE-- 264
           I+  CK   + + E+    M+      D  TY TLI  YCK G   EA  V+++ME+E  
Sbjct: 506 INGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAI 565

Query: 265 ---------------------------------GISPDIVTYNSLIHGFCREGRMREARR 291
                                            G+SP++VTY +LI G+C EGR+ +A  
Sbjct: 566 LPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFT 625

Query: 292 LFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVY-------------- 335
            + D+  KG  PN +  + ++    R   ++EA  L + M    V+              
Sbjct: 626 AYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVNLDVFLDHGYFDRLHKADD 685

Query: 336 ---------------------PGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNV 374
                                P  V YN  +  LCK G++ DA ++ + +  +  +PDN 
Sbjct: 686 GNLDSQKIADTLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNF 745

Query: 375 TCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGM 434
           T  TLI+ Y   G+   A  +++ ML+ GL  +  TY ALI+G CK+  +D A++L   +
Sbjct: 746 TYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKL 805

Query: 435 LDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKV 494
              G +P+  SY+ L+DGYC   N    L L ++ +  G+   +  Y ALI  FCK+  +
Sbjct: 806 HLKGLAPNVISYNILIDGYCKNGNTREALDLRNKMLKEGISPSLITYSALIYGFCKQGDM 865

Query: 495 DYAQRLFNLMQGNGILGDSVI--YTSLAYAYWRAGEPKACSDILDDMY 540
             A  L + M+   +  D  I  +  L   + + GE K  + + + M+
Sbjct: 866 GKATNLLDEMR--ELFADQNIAKFVKLVEGHVKCGEVKKIAKLHNMMH 911



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 112/444 (25%), Positives = 203/444 (45%), Gaps = 58/444 (13%)

Query: 63  FFK----WAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNA 118
           FF+    W +     Y  S  +  TMI+   K          +EK+     +      N 
Sbjct: 480 FFRALALWNDILARGYGRSTYAFNTMINGFCK----------MEKM-----IEAEETFNR 524

Query: 119 LVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKD 178
           + ++  +PDG ++    L+  Y  L   ++  +V ++M    ++P +     L+  L K 
Sbjct: 525 MKELGFEPDGVTY--RTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKS 582

Query: 179 RLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTY 238
           + T  V  +  +M   G+  N+  Y  LI   C    +DK      +M  K    ++   
Sbjct: 583 KKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIIC 642

Query: 239 NTLIALYCKKGMHYEA--------------------------------LAVQDRMEREGI 266
           + +++   + G   EA                                  + D ++    
Sbjct: 643 SKIVSSLYRLGRIDEANMLLQKMVNLDVFLDHGYFDRLHKADDGNLDSQKIADTLDESSK 702

Query: 267 S---PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEE 321
           S   P+ V YN  I G C+ G++ +A+++F  +  +G +P++ TY TLI GY  A ++ +
Sbjct: 703 SFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVND 762

Query: 322 ALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
           A  LR+ M  +G+ P ++TYN+++  LCK G +  A +L ++++ K +AP+ ++ N LI+
Sbjct: 763 AFSLRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNILID 822

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
            YCK G+T  A+ ++N+ML+ G+     TY ALI+GFCK  +M  A  LL  M +     
Sbjct: 823 GYCKNGNTREALDLRNKMLKEGISPSLITYSALIYGFCKQGDMGKATNLLDEMRELFADQ 882

Query: 442 SYCSYSWLVDGYCNKNNEEALLKL 465
           +   +  LV+G+      + + KL
Sbjct: 883 NIAKFVKLVEGHVKCGEVKKIAKL 906



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 62/220 (28%), Positives = 120/220 (54%), Gaps = 14/220 (6%)

Query: 146 TQDGLQVFDQMRVHNLMP-HLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYN 204
             D  ++F  + +    P +   CT++    A   + D  + +  +M++ G+  NI  YN
Sbjct: 725 VDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVND-AFSLRDEMLKRGLAPNIITYN 783

Query: 205 VLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMERE 264
            LI+  CKS ++D+ +KL  ++  K +  ++ +YN LI  YCK G   EAL ++++M +E
Sbjct: 784 ALINGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNILIDGYCKNGNTREALDLRNKMLKE 843

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIKG--ATPNHVTYTTLIDGYCRANDLEEA 322
           GISP ++TY++LI+GFC++G M +A  L  +++   A  N   +  L++G+ +  ++++ 
Sbjct: 844 GISPSLITYSALIYGFCKQGDMGKATNLLDEMRELFADQNIAKFVKLVEGHVKCGEVKKI 903

Query: 323 LRLREVMAAKGVYPGVVTYNSI----------LRKLCKEG 352
            +L  +M       GV+++  +          + KLC +G
Sbjct: 904 AKLHNMMHITIPCAGVISHKQMELDVFSNAKEMLKLCVDG 943


>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
 gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
          Length = 649

 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 125/406 (30%), Positives = 208/406 (51%), Gaps = 2/406 (0%)

Query: 122 IHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLT 181
           +  D + N++ L+ +V  Y           V  +M    + P +    VL+++  +    
Sbjct: 149 LSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDV 208

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
           D    +   M   G+   I  +N ++   CK    DK +++   M+   V  D+ ++N L
Sbjct: 209 DAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNIL 268

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGA-- 299
           I  +C+ G   EA+     M++ G++PD+V+++ LI  F   G+M  A    R++KG   
Sbjct: 269 IGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGL 328

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
            P+ V YT +I G+CRA  + EALR+R+ M   G  P VVTYN++L  LCK+ R+ DA  
Sbjct: 329 VPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEE 388

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
           LLNEM E+ + PD  T  TLI+ YC+ G+   A+++ + +L   L  D   Y +LI G C
Sbjct: 389 LLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMC 448

Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
           +  ++  A EL   M      P++ +YS L+D +C K   E     LDE VS+G   ++ 
Sbjct: 449 RKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIM 508

Query: 480 VYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWR 525
            Y ++I+ +C+   V   Q+    M  + IL D + + +L + Y +
Sbjct: 509 TYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIK 554



 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 128/469 (27%), Positives = 235/469 (50%), Gaps = 4/469 (0%)

Query: 98  QNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMR 157
           Q++L +++ R   S   ++++L+     P     V   L+  Y   +  ++  + F  + 
Sbjct: 57  QSLLLRMSRRRGASRREIVSSLLA--SSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLL 114

Query: 158 VHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVD 217
            H +     A   LL +L++     +  + Y+ ++      N +  N+++H+ CKS + D
Sbjct: 115 DHRVPVPASASNALLAALSRAGWPHLAEEAYRLVLSSDSEVNAYTLNIMVHSYCKSLEFD 174

Query: 218 KVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLI 277
           K + ++ EME + V  D+ T+N LI    + G    A+A+ D M  +G+ P IVT+NS++
Sbjct: 175 KADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVL 234

Query: 278 HGFCREGRMREARRLFR--DIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVY 335
            G C+  R  +A+ +FR  D     P+  ++  LI G+CR  ++EEA++  + M  +GV 
Sbjct: 235 KGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVT 294

Query: 336 PGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKV 395
           P VV+++ ++      G++  A   L EM    + PD V    +I  +C+ G  + A++V
Sbjct: 295 PDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRV 354

Query: 396 KNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCN 455
           ++ M+  G + D  TY  L++G CK   +  A+ELL  M + G +P  C+++ L+ GYC 
Sbjct: 355 RDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCR 414

Query: 456 KNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVI 515
             N E  L+L D  + + L  DV  Y +LI   C+K  +  A  L++ M    I  + V 
Sbjct: 415 DGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVT 474

Query: 516 YTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
           Y+ L  ++   G+ +     LD+M  +  +  +  Y S    Y +   +
Sbjct: 475 YSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNV 523



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 119/430 (27%), Positives = 211/430 (49%), Gaps = 37/430 (8%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           + + D M    L P +     +L  L K R  D   +V++ M Q  V  ++  +N+LI  
Sbjct: 212 IALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGG 271

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY------------------------ 245
            C+  +V++  K   EM+ + V  D+ +++ LI L+                        
Sbjct: 272 FCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPD 331

Query: 246 -----------CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR 294
                      C+ G   EAL V+D M   G  PD+VTYN+L++G C++ R+ +A  L  
Sbjct: 332 GVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLN 391

Query: 295 DIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEG 352
           ++K  G TP+  T+TTLI GYCR  + E+AL+L + +  + + P VV YNS++  +C++G
Sbjct: 392 EMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKG 451

Query: 353 RIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYK 412
            +  AN L ++M+ ++I P++VT + LI+++C+ G    A    + M+  G + +  TY 
Sbjct: 452 DLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYN 511

Query: 413 ALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSR 472
           ++I G+C++  +   ++ L  M+     P   +++ L+ GY  + N      + +     
Sbjct: 512 SIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKE 571

Query: 473 GLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKAC 532
            +  D   Y  +I  F ++  ++ A R+F  M  +GI  D   Y SL   +  AG  K  
Sbjct: 572 MVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEA 631

Query: 533 SDILDDMYRR 542
             + D+M  R
Sbjct: 632 FQLHDEMMHR 641



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 108/325 (33%), Positives = 172/325 (52%), Gaps = 2/325 (0%)

Query: 155 QMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSS 214
           +M+   L+P     T+++    +        +V  +MV LG + ++  YN L++  CK  
Sbjct: 322 EMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQH 381

Query: 215 DVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYN 274
            +   E+LL EM+ + V  DL T+ TLI  YC+ G   +AL + D +  + + PD+V YN
Sbjct: 382 RLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYN 441

Query: 275 SLIHGFCREGRMREARRLFRDIKGAT--PNHVTYTTLIDGYCRANDLEEALRLREVMAAK 332
           SLI G CR+G + +A  L+ D+      PNHVTY+ LID +C    +EEA    + M +K
Sbjct: 442 SLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSK 501

Query: 333 GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
           G  P ++TYNSI++  C+ G ++   + L +M +  I PD +T NTLI+ Y K  +   A
Sbjct: 502 GNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGA 561

Query: 393 MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
             V N M +  +  D  TY  +I+GF +   M+ A  +   M  +G  P   +Y  L++G
Sbjct: 562 FNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLING 621

Query: 453 YCNKNNEEALLKLLDEFVSRGLCVD 477
           +    N +   +L DE + RG   D
Sbjct: 622 HVTAGNSKEAFQLHDEMMHRGFAPD 646



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 104/408 (25%), Positives = 201/408 (49%), Gaps = 4/408 (0%)

Query: 107 RDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLH 166
           R F     V  A+ +    PD  S   + L+  +  +   ++ ++ + +M+   + P + 
Sbjct: 241 RRFDKAKEVFRAMDQCSVAPDVRS--FNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVV 298

Query: 167 ACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEM 226
           + + L+   +     D      ++M  LG+V +  +Y ++I   C++  + +  ++  EM
Sbjct: 299 SFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEM 358

Query: 227 EFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRM 286
                  D+ TYNTL+   CK+    +A  + + M+  G++PD+ T+ +LIHG+CR+G  
Sbjct: 359 VGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNF 418

Query: 287 REARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSI 344
            +A +LF  +  +   P+ V Y +LIDG CR  DL +A  L + M A+ ++P  VTY+ +
Sbjct: 419 EKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSIL 478

Query: 345 LRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGL 404
           +   C++G++ +A   L+EM  K   P+ +T N++I  YC+ G+     +   +M++  +
Sbjct: 479 IDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNI 538

Query: 405 MLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLK 464
           + D  T+  LIHG+ K + M  A  +   M      P   +Y+ +++G+  + N E   +
Sbjct: 539 LPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGR 598

Query: 465 LLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGD 512
           +  +  + G+  D   Y +LI           A +L + M   G   D
Sbjct: 599 VFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRGFAPD 646



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 97/324 (29%), Positives = 157/324 (48%), Gaps = 14/324 (4%)

Query: 272 TYNSLIHGFCREGRMREARRLFRDIKG--ATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           T N ++H +C+     +A  +  +++     P+ VT+  LID   RA D++ A+ L + M
Sbjct: 159 TLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSM 218

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
           A KG+ PG+VT+NS+L+ LCK  R   A  +   M++  +APD  + N LI  +C++G+ 
Sbjct: 219 ANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEV 278

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
             AMK    M + G+  D  ++  LI  F    +MD A   L  M   G  P    Y+ +
Sbjct: 279 EEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMV 338

Query: 450 VDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGI 509
           + G+C   +    L++ DE V  G   DV  Y  L+   CK+ ++  A+ L N M+  G+
Sbjct: 339 IGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGV 398

Query: 510 LGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSF------SASYAKDNE 563
             D   +T+L + Y R G  +    + D +  +RL   +  Y S           AK NE
Sbjct: 399 TPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANE 458

Query: 564 ILD------LFWSHVVDRGLMSKH 581
           + D      +F +HV    L+  H
Sbjct: 459 LWDDMHAREIFPNHVTYSILIDSH 482



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 118/229 (51%), Gaps = 2/229 (0%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           +  LQ+FD +    L P + A   L++ + +        +++  M    +  N   Y++L
Sbjct: 419 EKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSIL 478

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           I + C+   V++    L EM  K    ++ TYN++I  YC+ G   +      +M ++ I
Sbjct: 479 IDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNI 538

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDIKG--ATPNHVTYTTLIDGYCRANDLEEALR 324
            PD++T+N+LIHG+ +E  M  A  +F  ++     P+ VTY  +I+G+    ++EEA R
Sbjct: 539 LPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGR 598

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDN 373
           + + M A G+ P   TY S++      G  ++A +L +EM  +  APD+
Sbjct: 599 VFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRGFAPDD 647


>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
 gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
          Length = 695

 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 126/420 (30%), Positives = 211/420 (50%), Gaps = 2/420 (0%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           V  +M    + P +    V++++  +    +    +   MV  G+   I  YN ++   C
Sbjct: 117 VISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLC 176

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           +S   DK  ++  EM+   V  D+ ++  LI  +C+ G   EAL +   M   GI PD+V
Sbjct: 177 RSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLV 236

Query: 272 TYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           +++ LI  F R G+M  A    R+++  G  P+ V YT +I G+CRA  + +ALR+R+ M
Sbjct: 237 SFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEM 296

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
              G  P VVTYN++L  LCKE R+ DA  LLNEM E+ + PD  T  TLI+ YC  G  
Sbjct: 297 VGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKL 356

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
             A+++ + ML   L  D  TY  LI G C+  ++D A +L   M      P++ +YS L
Sbjct: 357 DKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSIL 416

Query: 450 VDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGI 509
           +D +C K   E     LDE +++G+  ++  Y ++I+ +C+   V   Q+    M  N +
Sbjct: 417 IDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKV 476

Query: 510 LGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFW 569
             D + Y +L + Y +  +      +L+ M + ++   +  Y      ++    + +  W
Sbjct: 477 SPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGW 536



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 119/434 (27%), Positives = 215/434 (49%), Gaps = 37/434 (8%)

Query: 146 TQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNV 205
            +  + + D M    L P +     +L  L +  + D  W+V+K+M   GV  ++  + +
Sbjct: 146 AEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTI 205

Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY-------------------- 245
           LI   C+  ++++  K+  EM  + ++ DL +++ LI L+                    
Sbjct: 206 LIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFG 265

Query: 246 ---------------CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREAR 290
                          C+ G+  +AL V+D M   G  PD+VTYN+L++G C+E R+ +A 
Sbjct: 266 LVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAE 325

Query: 291 RLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
            L  +++  G  P+  T+TTLI GYC    L++AL+L + M  + + P +VTYN+++  +
Sbjct: 326 GLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGM 385

Query: 349 CKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ 408
           C++G +  AN L ++M+ ++I P++VT + LI+++C+ G    A    + M+  G++ + 
Sbjct: 386 CRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNI 445

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
            TY ++I G+C++  +   ++ L  M+    SP   +Y+ L+ GY  ++      KLL+ 
Sbjct: 446 MTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNM 505

Query: 469 FVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
                +  DV  Y  LI  F     V  A  +F  M   GI  D   Y S+   +  AG 
Sbjct: 506 MEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGN 565

Query: 529 PKACSDILDDMYRR 542
            K    + D+M +R
Sbjct: 566 SKEAFQLHDEMLQR 579



 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 118/441 (26%), Positives = 223/441 (50%), Gaps = 2/441 (0%)

Query: 126 PDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVW 185
           P     V   L+  Y   +  ++  + F  +  H +     A   LL +L++     +  
Sbjct: 21  PTPQPRVFDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAALSRAGWPHLAA 80

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
             Y+ +       N +  N+++H  CK+ + DKV+ ++ EME + V  D+ T+N ++   
Sbjct: 81  DAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDAR 140

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNH 303
            + G    A+A+ D M  +G+ P IVTYNS++ G CR G   +A  +F+++   G  P+ 
Sbjct: 141 FRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDV 200

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
            ++T LI G+CR  ++EEAL++ + M  +G+ P +V+++ ++    + G++  A   L E
Sbjct: 201 RSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLRE 260

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
           M    + PD V    +I  +C+ G  + A++V++ M+  G + D  TY  L++G CK + 
Sbjct: 261 MRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERR 320

Query: 424 MDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRA 483
           +  A+ LL  M + G  P  C+++ L+ GYC +   +  L+L D  +++ L  D+  Y  
Sbjct: 321 LLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNT 380

Query: 484 LIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRR 543
           LI   C++  +D A  L++ M    I  + V Y+ L  ++   G+ +     LD+M  + 
Sbjct: 381 LIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKG 440

Query: 544 LMITLKIYRSFSASYAKDNEI 564
           ++  +  Y S    Y +   +
Sbjct: 441 ILPNIMTYNSIIKGYCRSGNV 461



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 111/343 (32%), Positives = 174/343 (50%), Gaps = 2/343 (0%)

Query: 133 LSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMV 192
            S L+  +A        +    +MR   L+P     T+++    +  L     +V  +MV
Sbjct: 238 FSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMV 297

Query: 193 QLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHY 252
             G + ++  YN L++  CK   +   E LL EM  + V  DL T+ TLI  YC +G   
Sbjct: 298 GCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLD 357

Query: 253 EALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLI 310
           +AL + D M  + + PDIVTYN+LI G CR+G + +A  L+ D+  +   PNHVTY+ LI
Sbjct: 358 KALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILI 417

Query: 311 DGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIA 370
           D +C    +E+A    + M  KG+ P ++TYNSI++  C+ G +    + L +M   K++
Sbjct: 418 DSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVS 477

Query: 371 PDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL 430
           PD +T NTLI+ Y K      A K+ N M +  +  D  TY  LI+GF     +  A  +
Sbjct: 478 PDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWI 537

Query: 431 LFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
              M   G  P   +Y  +++G+    N +   +L DE + RG
Sbjct: 538 FEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRG 580


>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 788

 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 152/527 (28%), Positives = 255/527 (48%), Gaps = 39/527 (7%)

Query: 13  FIKTISAIMLKGHWA-------KLLNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFK 65
           F K + AI+  GH+        +L +  I+ S+   A   +L+N Y   H    + AF  
Sbjct: 58  FDKLLGAIVRMGHYPTAISLFTQLQSKGISPSI---ATFTILINCY--FHQSHTAFAFSL 112

Query: 66  WAESAVPNYKHSLQSHWTMIHILTKN----KHFKSAQNMLEKIALRDFLSTPSVLNALVK 121
            A      Y+ +L +  T+I+    N    K     QN+L +  L D  +  +++N L K
Sbjct: 113 LATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSK 172

Query: 122 IHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLT 181
                  N  +              +  L +  +M   ++ P+L   + L++ L KD   
Sbjct: 173 -------NGQI--------------KAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFV 211

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
                +  ++ + G++ +   YN LI  CC      +V +LL +M  ++V  D +T+N L
Sbjct: 212 SDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNIL 271

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGA 299
           I   CK+G   EA  V   M + G  PDIVTYN+L+ G+C    + EAR LF  +  +G 
Sbjct: 272 IDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGL 331

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
            P+ + Y  LIDGYC+   ++EA+ L + +  K + P + +YNS++  LC  GRI    +
Sbjct: 332 EPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKK 391

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
           LL+EM+     PD VT N LI+A CK G    A+ V   M++ G+  +  TY A++ G+C
Sbjct: 392 LLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYC 451

Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
               +++AK++   M+ +G  P   +Y+ L++GYC     +  + L  E   + L  D++
Sbjct: 452 LRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIA 511

Query: 480 VYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRA 526
            Y +LI   C   ++ + Q L + M  +G   D + Y  L  A+ + 
Sbjct: 512 SYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKT 558



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 138/500 (27%), Positives = 227/500 (45%), Gaps = 17/500 (3%)

Query: 93  HFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQV 152
           HF+  QN  +    R+     +  N +V++   P   + V   L+     +      + +
Sbjct: 21  HFQ-PQNPHKNCRFRNVDDAVTCFNRMVRVFPPPP--TSVFDKLLGAIVRMGHYPTAISL 77

Query: 153 FDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCK 212
           F Q++   + P +   T+L+N       T   + +   +++ G   N+  +N +I+  C 
Sbjct: 78  FTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCI 137

Query: 213 SSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVT 272
           +  + K       +  +    D FTY TLI    K G    AL +   ME+  + P++V 
Sbjct: 138 NGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVM 197

Query: 273 YNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMA 330
           Y++LI G C++G + +A  L   I  +G   + VTY +LIDG C     +E  +L   M 
Sbjct: 198 YSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMV 257

Query: 331 AKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTA 390
            + V P   T+N ++  LCKEGRI +A  +L  M+++   PD VT N L+  YC   +  
Sbjct: 258 RENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVH 317

Query: 391 SAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLV 450
            A ++ NRM++ GL  D   Y  LI G+CK K +D A  L   + +    P+  SY+ L+
Sbjct: 318 EARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLI 377

Query: 451 DGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGIL 510
           DG CN      + KLLDE        DV  Y  LI   CK+ ++  A  +  +M   G+ 
Sbjct: 378 DGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVK 437

Query: 511 GDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWS 570
            + V Y ++   Y          DI + M +  L   +  Y      Y K         +
Sbjct: 438 PNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCK---------T 488

Query: 571 HVVDRGLMSKHIFKEMQLRN 590
            +VD  ++   +FKEM+ +N
Sbjct: 489 EMVDEAIV---LFKEMRHKN 505



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 118/403 (29%), Positives = 210/403 (52%), Gaps = 5/403 (1%)

Query: 110 LSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACT 169
           L    VL  + K  + PD  ++  + L+  Y + +   +  ++F++M    L P +    
Sbjct: 282 LEAQGVLAMMSKRGEKPDIVTY--NALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYN 339

Query: 170 VLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFK 229
           VL++   K ++ D    ++K++    +V  I  YN LI   C S  +  V+KLL EM   
Sbjct: 340 VLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGS 399

Query: 230 DVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA 289
               D+ TYN LI   CK+G   EAL V   M ++G+ P+IVTYN+++ G+C    +  A
Sbjct: 400 AQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVA 459

Query: 290 RRLF-RDIK-GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRK 347
           + +F R +K G  P+ + Y  LI+GYC+   ++EA+ L + M  K + P + +YNS++  
Sbjct: 460 KDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDG 519

Query: 348 LCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLD 407
           LC  GRI     LL+EM +   +PD +T N L++A+CK      A+ +  +++E G+  D
Sbjct: 520 LCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE-GIWPD 578

Query: 408 QFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLD 467
            +T  A++   CK +++ +A++ L  +L  G SP+  +Y+ L++  C   +    + LL 
Sbjct: 579 FYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLS 638

Query: 468 EFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGIL 510
           +        D   +  +I    ++ + D A++L   M   G++
Sbjct: 639 KMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGLV 681



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 113/372 (30%), Positives = 178/372 (47%), Gaps = 2/372 (0%)

Query: 170 VLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFK 229
            L+N L+K+        + ++M +  V  N+ +Y+ LI   CK   V     L  ++  +
Sbjct: 165 TLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGER 224

Query: 230 DVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA 289
            +  D  TYN+LI   C  G   E   +  +M RE + PD  T+N LI   C+EGR+ EA
Sbjct: 225 GILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEA 284

Query: 290 RRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRK 347
           + +   +  +G  P+ VTY  L++GYC   ++ EA  L   M  +G+ P V+ YN ++  
Sbjct: 285 QGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDG 344

Query: 348 LCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLD 407
            CK   + +A  L  E+  K + P   + N+LI+  C  G  +   K+ + M  +    D
Sbjct: 345 YCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPD 404

Query: 408 QFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLD 467
             TY  LI   CK   +  A  +L  M+  G  P+  +Y+ ++DGYC +NN      + +
Sbjct: 405 VVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFN 464

Query: 468 EFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
             V  GL  D+  Y  LI  +CK E VD A  LF  M+   ++ D   Y SL       G
Sbjct: 465 RMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLG 524

Query: 528 EPKACSDILDDM 539
                 ++LD+M
Sbjct: 525 RIPHVQELLDEM 536



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 130/459 (28%), Positives = 206/459 (44%), Gaps = 24/459 (5%)

Query: 75  KHSLQSHWTM----IHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNS 130
           K S+Q +  M    I  L K+     A  +  +I  R  L      N+L+      DG  
Sbjct: 188 KSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLI------DGCC 241

Query: 131 HVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKK 190
            V  W           Q+  Q+  +M   N+ P  +   +L+++L K+        V   
Sbjct: 242 SVGRW-----------QEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAM 290

Query: 191 MVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGM 250
           M + G   +I  YN L+   C   +V +  +L   M  + +  D+  YN LI  YCK  M
Sbjct: 291 MSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKM 350

Query: 251 HYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGAT--PNHVTYTT 308
             EA+ +   +  + + P I +YNSLI G C  GR+   ++L  ++ G+   P+ VTY  
Sbjct: 351 VDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNI 410

Query: 309 LIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKK 368
           LID  C+   + EAL +  +M  KGV P +VTYN+++   C    +  A  + N M +  
Sbjct: 411 LIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSG 470

Query: 369 IAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAK 428
           + PD +  N LIN YCK      A+ +   M    L+ D  +Y +LI G C    +   +
Sbjct: 471 LEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQ 530

Query: 429 ELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRF 488
           ELL  M D+G SP   +Y+ L+D +C     +  + L  + V  G+  D     A++   
Sbjct: 531 ELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIV-EGIWPDFYTNHAIVDNL 589

Query: 489 CKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
           CK EK+  A+     +  +G   +   YT L  A  + G
Sbjct: 590 CKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDG 628


>gi|297721877|ref|NP_001173302.1| Os03g0201300 [Oryza sativa Japonica Group]
 gi|108706707|gb|ABF94502.1| salt-inducible protein, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255674288|dbj|BAH92030.1| Os03g0201300 [Oryza sativa Japonica Group]
          Length = 796

 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 131/430 (30%), Positives = 216/430 (50%), Gaps = 41/430 (9%)

Query: 140 YANLKMTQDGLQVFDQMRVH-NLMPHLHACTVLLNSLAKDR--LTDMVWKVYKKMVQLGV 196
           YA L++     Q+   +R    + P L A   +L++L++    L      V++ +++L +
Sbjct: 145 YARLRLPHLAAQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRL 204

Query: 197 VANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALA 256
             N + +N+L+H  C    +      L  M+   +  D  TYNTL+  +C+KGM  EA A
Sbjct: 205 HPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARA 264

Query: 257 VQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYC 314
           +  RM+R+GI+P   TYN+L+  F R G +++A ++   +   G  P+  TY  L  G C
Sbjct: 265 LLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLC 324

Query: 315 RANDLEEALRLR------------------------------------EVMAAKGVYPGV 338
           +A  ++EA RL+                                    E M  KGV P +
Sbjct: 325 QAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTL 384

Query: 339 VTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNR 398
           VT+N +++ LCKEG++ +A   L ++ E+ +APD +T NTLI+AYCK G+ A A  + + 
Sbjct: 385 VTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDE 444

Query: 399 MLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNN 458
           M+  GL +D FT   +++  CK K  + A+ELL      GF P   SY  ++  Y  + N
Sbjct: 445 MVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYN 504

Query: 459 EEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTS 518
            E  L+L D+ + R L   +S Y  LI+  C+ E++  A    N +   G++ D   Y  
Sbjct: 505 PEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNI 564

Query: 519 LAYAYWRAGE 528
           + +AY + G+
Sbjct: 565 IIHAYCKEGD 574



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 124/430 (28%), Positives = 210/430 (48%), Gaps = 8/430 (1%)

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           LV  +A L   +   +V + M  +   P L    VL   L +    D  +++  +M +L 
Sbjct: 284 LVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLS 343

Query: 196 V-VANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEA 254
             + ++  YN L+ AC K        +LL EM  K V+  L T+N ++   CK+G   EA
Sbjct: 344 TALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEA 403

Query: 255 LAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDG 312
           L   +++  EG++PD++TYN+LI  +C+ G + +A  L  ++  KG   +  T  T++  
Sbjct: 404 LGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYN 463

Query: 313 YCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPD 372
            C+    E+A  L      +G  P  V+Y +++    KE     A RL ++M E+K+ P 
Sbjct: 464 LCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPS 523

Query: 373 NVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLF 432
             T NTLI   C++     A+   N ++E GL+ D+ TY  +IH +CK  +++ A     
Sbjct: 524 ISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHN 583

Query: 433 GMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKE 492
            M++  F P   + + L++G C     +  LKL + +V +G  VDV  Y  LI+  CK  
Sbjct: 584 KMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVG 643

Query: 493 KVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYR 552
            VD A   F+ M+  G+  D+  Y  +  A   AG  +   ++L      +L  + K+ +
Sbjct: 644 DVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNML-----HKLADSGKLSQ 698

Query: 553 SFSASYAKDN 562
           SF+    K +
Sbjct: 699 SFACPLLKPS 708



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 97/415 (23%), Positives = 184/415 (44%), Gaps = 37/415 (8%)

Query: 75  KHSLQSHWTMIHILTKNKHFKSAQNMLEKIA----LRDFLSTPSVLNALVK--------- 121
           K +L +H  ++  L K    + A   LEKIA      D ++  ++++A  K         
Sbjct: 381 KPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFT 440

Query: 122 IHDDPDG-----NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLA 176
           + D+  G     ++  L+ ++     +K  +D  ++         +P   +   ++ +  
Sbjct: 441 LMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYF 500

Query: 177 KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLF 236
           K+   +   +++ +M++  ++ +I  YN LI   C+   + +    L E+  K +  D  
Sbjct: 501 KEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDET 560

Query: 237 TYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD- 295
           TYN +I  YCK+G    A    ++M      PD+VT N+L++G C  G++ +A +LF   
Sbjct: 561 TYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESW 620

Query: 296 -IKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRI 354
             KG   + +TY TLI   C+  D++ AL   + M  KG+ P   TYN +L  L + GR 
Sbjct: 621 VEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRS 680

Query: 355 RDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD---------TASAMKVKNRMLEAGLM 405
            +A+ +L+++ +      +  C  L  +     D           S+ K ++  LE    
Sbjct: 681 EEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNALE---- 736

Query: 406 LDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEE 460
               TY   ++G C   ++  AK +L  M+  G      +Y  L++G   +   +
Sbjct: 737 ----TYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDSSTYITLMEGLIKRQKRQ 787



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/188 (22%), Positives = 77/188 (40%), Gaps = 3/188 (1%)

Query: 357 ANRLLNEMNEKK-IAPDNVTCNTLINAYCKIGDT--ASAMKVKNRMLEAGLMLDQFTYKA 413
           A +LL+ +  ++ + P     N +++A  +   T   +++ V   ++E  L  + +T+  
Sbjct: 154 AAQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNL 213

Query: 414 LIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
           L+H  C    +  A   L  M   G SP   +Y+ L++ +C K        LL      G
Sbjct: 214 LVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDG 273

Query: 474 LCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACS 533
           +      Y  L+  F +   +  A ++   M   G   D   Y  LA    +AG+     
Sbjct: 274 IAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAF 333

Query: 534 DILDDMYR 541
            + D+M R
Sbjct: 334 RLKDEMER 341


>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
 gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
          Length = 599

 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 139/462 (30%), Positives = 220/462 (47%), Gaps = 19/462 (4%)

Query: 77  SLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWL 136
           S  ++ ++IH L     F  A+ +   +  R    +P   N ++                
Sbjct: 44  STVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDAS------------- 90

Query: 137 VIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGV 196
                   M ++   +  +M     +P +     +++ L K    +    ++ +M +LG 
Sbjct: 91  ----CKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGC 146

Query: 197 VANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALA 256
             N   +N +I   C+ S +D+  ++  EME KD+  D ++Y  LI    K G   EA  
Sbjct: 147 TPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAYK 206

Query: 257 VQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYC 314
           +  RM   GI+P  VTYN +IHG C    + EA  LF+ +  KG  P+  T+  LID +C
Sbjct: 207 LFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHC 266

Query: 315 RANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNV 374
           +   L+EA RL + M   G  P VVTY++++  LC   R+ DA  LL +M +++  P  V
Sbjct: 267 KRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVV 326

Query: 375 TCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGM 434
           T NTLI+  CK G    A +V + M+ +G   D  TY  L+HG C+A + + A+ELL  M
Sbjct: 327 TQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDM 386

Query: 435 LDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKV 494
           +  G +P+  +Y+ LV G C  N       +  +  S G   ++  Y ALI  FC   +V
Sbjct: 387 VARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQV 446

Query: 495 DYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDIL 536
           D   +LF  M   GI  D V+Y +LA    ++G      +IL
Sbjct: 447 DGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEIL 488



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 126/429 (29%), Positives = 207/429 (48%), Gaps = 6/429 (1%)

Query: 115 VLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNS 174
           + N + ++   P+  SH  + +++            QVF +M   ++ P   +  +L++ 
Sbjct: 137 LFNEMERLGCTPNRRSH--NTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDG 194

Query: 175 LAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRAD 234
           LAK    +  +K++++M+  G+  +   YNV+IH  C +  +D+  +L   M  K  R  
Sbjct: 195 LAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPS 254

Query: 235 LFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR 294
            FT+N LI  +CK+G   EA  +  RM  +G  PD+VTY++LI G C   R+ +AR L  
Sbjct: 255 RFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLE 314

Query: 295 DI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEG 352
           D+  +   P  VT  TLI G C+A  ++EA  + + M + G  P VVTYN+++   C+ G
Sbjct: 315 DMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAG 374

Query: 353 RIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYK 412
           +   A  LL++M  + +AP+ VT   L++  CK      A  V  +M  +G   + FTY 
Sbjct: 375 QTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYT 434

Query: 413 ALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS- 471
           ALI GFC A ++D   +L   M+ AG SP +  Y  L    C        L++L E    
Sbjct: 435 ALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRES 494

Query: 472 -RGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPK 530
            R       VYR  +    +  K++ A      M   G L       SL     ++G+  
Sbjct: 495 LRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGG 554

Query: 531 ACSDILDDM 539
               +L+++
Sbjct: 555 EARAVLEEI 563



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 119/411 (28%), Positives = 201/411 (48%), Gaps = 2/411 (0%)

Query: 156 MRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSD 215
           M   N+ P   +  +L++ LAK    +    +++K++  GV  +   Y  LIH  C ++ 
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 216 VDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNS 275
            D   +L  +M  +       TYN +I   CK+GM  EA  +  +M  +G  PD+VTYN+
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 276 LIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKG 333
           ++ G C+  R+ EA  LF +++  G TPN  ++ T+I G C+ + +++A ++   M AK 
Sbjct: 121 VMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKD 180

Query: 334 VYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAM 393
           + P   +Y  ++  L K G++ +A +L   M +  I P  VT N +I+  C       A+
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240

Query: 394 KVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGY 453
           ++   M   G    +FT+  LI   CK  ++D A  LL  M D G  P   +YS L+ G 
Sbjct: 241 ELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGL 300

Query: 454 CNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDS 513
           C+    +    LL++ V R     V     LI   CK  ++  A+ + + M  +G   D 
Sbjct: 301 CSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDV 360

Query: 514 VIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
           V Y +L + + RAG+ +   ++L DM  R L   +  Y +  +   K N +
Sbjct: 361 VTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRL 411



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 116/395 (29%), Positives = 181/395 (45%), Gaps = 21/395 (5%)

Query: 80  SHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIF 139
           S+  +I  L K      A  + ++  + D   TPS +   V IH            + + 
Sbjct: 187 SYGILIDGLAKAGKLNEAYKLFQR--MLDSGITPSAVTYNVVIH-----------GMCLA 233

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
           Y       + L++F  MR     P      +L+++  K    D  +++ K+M   G V +
Sbjct: 234 YT----LDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPD 289

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
           +  Y+ LI   C  + VD    LL +M  +  +  + T NTLI   CK G   EA  V D
Sbjct: 290 VVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLD 349

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRAN 317
            M   G SPD+VTYN+L+HG CR G+   AR L  D+  +G  PN VTYT L+ G C+AN
Sbjct: 350 AMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKAN 409

Query: 318 DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCN 377
            L EA  +   M + G  P + TY +++   C  G++    +L  EM    I+PD+V   
Sbjct: 410 RLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYG 469

Query: 378 TLINAYCKIGDTASAMKVKNRMLEA--GLMLDQFTYKALIHGFCKAKEMDIAKELLFGML 435
           TL    CK G +A A+++     E+          Y+  + G  +A +M++A   +  M+
Sbjct: 470 TLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMV 529

Query: 436 DAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFV 470
             G  P+    + LV G C          +L+E +
Sbjct: 530 RGGQLPAPERCASLVAGLCKSGQGGEARAVLEEIM 564


>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial [Vitis vinifera]
 gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
          Length = 765

 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 135/389 (34%), Positives = 199/389 (51%), Gaps = 8/389 (2%)

Query: 159 HNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDK 218
           H + P+    T L++ L +   TD  W V   +++LG V      N L+ A  ++ +  +
Sbjct: 264 HEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRAREFKR 323

Query: 219 VEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRM---EREG--ISPDIVTY 273
           +  LL EM+  D++ ++ T+  LI   CK     EAL V ++M   E  G  + PD++TY
Sbjct: 324 MNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITY 383

Query: 274 NSLIHGFCREGRMREARRLFRDIKGAT---PNHVTYTTLIDGYCRANDLEEALRLREVMA 330
           N+LI G C+ GR  E   L   ++      PN VTY  LIDGYC+A+ +E A  L + M 
Sbjct: 384 NTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMN 443

Query: 331 AKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTA 390
             GV P VVT N+++  +CK GRI  A    NEM  K +  + VT   LI A+C + +  
Sbjct: 444 KDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIE 503

Query: 391 SAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLV 450
            AM++ + MLEAG   D   Y  LI G  +A ++D A  +L  M +AGFSP   S++ L+
Sbjct: 504 KAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLI 563

Query: 451 DGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGIL 510
           +G+C KN  +   ++L E  + G+  D   Y  LI  F K      A RL   M   G++
Sbjct: 564 NGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLV 623

Query: 511 GDSVIYTSLAYAYWRAGEPKACSDILDDM 539
              V Y +L +AY   G       I  DM
Sbjct: 624 PTVVTYGALIHAYCLNGNLDEAMKIFRDM 652



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 112/374 (29%), Positives = 189/374 (50%), Gaps = 9/374 (2%)

Query: 155 QMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQ-----LGVVANIHLYNVLIHA 209
           +M+  ++ P++    +L+N L K R  D   +V++KM         V  ++  YN LI  
Sbjct: 330 EMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDG 389

Query: 210 CCKSSDVDKVEKLLCEMEFKD-VRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISP 268
            CK    ++   L+  M  +     +  TYN LI  YCK  M   A  + D+M ++G+ P
Sbjct: 390 LCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPP 449

Query: 269 DIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLR 326
           ++VT N+L+ G C+ GR+  A   F ++  KG   N VTYT LI  +C  N++E+A+ L 
Sbjct: 450 NVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELF 509

Query: 327 EVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKI 386
           + M   G  P  + Y +++  L + G++  A+ +L++M E   +PD V+ N LIN +C+ 
Sbjct: 510 DEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRK 569

Query: 387 GDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSY 446
                A ++   M  AG+  D  TY  LI  F K  +   A  L+  M+  G  P+  +Y
Sbjct: 570 NKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTY 629

Query: 447 SWLVDGYC-NKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
             L+  YC N N +EA+    D   +  +  +  +Y  LI   C+K +VD A  L + M+
Sbjct: 630 GALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMK 689

Query: 506 GNGILGDSVIYTSL 519
             G+  ++  + ++
Sbjct: 690 VKGVKPNTNTFNAM 703



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 91/326 (27%), Positives = 161/326 (49%), Gaps = 3/326 (0%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N+   + L+  Y    M +   ++FDQM    + P++     L++ + K    +   + +
Sbjct: 415 NTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFF 474

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
            +M   G+  N   Y  LI A C  ++++K  +L  EM       D   Y TLI+   + 
Sbjct: 475 NEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQA 534

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTY 306
           G    A  V  +M+  G SPDIV++N LI+GFCR+ ++ EA  + ++++  G  P+ VTY
Sbjct: 535 GKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTY 594

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
            TLI  + +  D   A RL + M  +G+ P VVTY +++   C  G + +A ++  +M+ 
Sbjct: 595 NTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSS 654

Query: 367 -KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMD 425
             K+ P+ V  N LIN+ C+      A+ + + M   G+  +  T+ A+  G  +   + 
Sbjct: 655 TSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLS 714

Query: 426 IAKELLFGMLDAGFSPSYCSYSWLVD 451
            A EL+  M +   +P Y +   L +
Sbjct: 715 KAFELMDRMTEHACNPDYITMEILTE 740



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 84/266 (31%), Positives = 140/266 (52%), Gaps = 3/266 (1%)

Query: 128 GNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKV 187
           GN+   + L+  + N+   +  +++FD+M      P       L++ L++    D    V
Sbjct: 484 GNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFV 543

Query: 188 YKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCK 247
             KM + G   +I  +NVLI+  C+ + +D+  ++L EME   ++ D  TYNTLI+ + K
Sbjct: 544 LSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSK 603

Query: 248 KGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGAT---PNHV 304
            G    A  +  +M +EG+ P +VTY +LIH +C  G + EA ++FRD+   +   PN V
Sbjct: 604 TGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTV 663

Query: 305 TYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM 364
            Y  LI+  CR N ++ AL L + M  KGV P   T+N++ + L ++  +  A  L++ M
Sbjct: 664 IYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRM 723

Query: 365 NEKKIAPDNVTCNTLINAYCKIGDTA 390
            E    PD +T   L      +G+TA
Sbjct: 724 TEHACNPDYITMEILTEWLSAVGETA 749



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 104/406 (25%), Positives = 175/406 (43%), Gaps = 18/406 (4%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           L +F   + H +   ++A T+L+    + ++ D  + VY ++     +   H+ N+LI  
Sbjct: 144 LDLFKTSKSHKIPLSVNAATLLIRCFGRAQMVDESFLVYNELCPSRRLT--HIRNILIDV 201

Query: 210 CCKSSDVDKVEKLLCEM-----EFKDVRADLFTYNTLIALYCKKGM---HYEALAVQDRM 261
             +   VD    LL EM     EF           + ++   K G      E + +  + 
Sbjct: 202 LFRKGRVDDALHLLDEMLQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDEEEIVGLVSKF 261

Query: 262 EREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDL 319
               + P+ +    LI   CR GR   A  +   +   G      +   L+    RA + 
Sbjct: 262 AEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRAREF 321

Query: 320 EEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKK-----IAPDNV 374
           +    L   M    + P VVT+  ++  LCK  R+ +A  +  +MN  +     + PD +
Sbjct: 322 KRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVI 381

Query: 375 TCNTLINAYCKIGDTASAMKVKNRML-EAGLMLDQFTYKALIHGFCKAKEMDIAKELLFG 433
           T NTLI+  CK+G     + +  RM  +   M +  TY  LI G+CKA  ++ A+EL   
Sbjct: 382 TYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQ 441

Query: 434 MLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEK 493
           M   G  P+  + + LVDG C        ++  +E   +GL  +   Y ALIR FC    
Sbjct: 442 MNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNN 501

Query: 494 VDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
           ++ A  LF+ M   G   D+++Y +L     +AG+    S +L  M
Sbjct: 502 IEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKM 547


>gi|410109951|gb|AFV61055.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           velutina]
          Length = 406

 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 120/404 (29%), Positives = 218/404 (53%), Gaps = 3/404 (0%)

Query: 85  IHILTKNKHFKSAQNMLEKIALRDFLSTPS-VLNALVKIHDDPDGNSHVLSWLVIFYANL 143
           IH L  ++ F  A+++L+ +  R    + S V  A+++       + +V S L+  Y   
Sbjct: 1   IHFLCTHQMFSEAKSLLQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLITAYLES 60

Query: 144 KMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLY 203
              +D ++ +   R H L      C  +L  L K +   +VW  Y+++++ G  A+++ +
Sbjct: 61  GFLRDAIECYXLTRKHKLWVPFDTCRKVLEYLMKLKYFKLVWGFYEEILECGYPASLYFF 120

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER 263
           N+L+H  CK  D+   + +   +    +R    +YNTL+  Y + G+  E   ++  M  
Sbjct: 121 NILMHRFCKDGDIRVAQSVFDAITKWGLRPSAVSYNTLMNGYIRLGVLDEGFRLKSAMLA 180

Query: 264 EGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEE 321
            G+ PD+ TY+ LI+G C+E +M +A  LF +  +KG  PN VT+TTLIDG+C+   ++ 
Sbjct: 181 SGVQPDVYTYSVLINGLCKESKMDDADELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDL 240

Query: 322 ALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
           A+ + + M ++ + P ++TYN+++  LCK+G ++ A+ L+++M+ K + PD +T  TLI+
Sbjct: 241 AMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSRKGLKPDKITYTTLID 300

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
             CK G   SA + + R+++  + LD   Y ALI G C+      A+++L  ML  G +P
Sbjct: 301 GCCKEGVLVSAFEHRKRLIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVGLNP 360

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
              +Y+ +++ +C K +     KLL E    G    V  Y  L+
Sbjct: 361 DTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLM 404



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 92/279 (32%), Positives = 149/279 (53%), Gaps = 2/279 (0%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           G    +  +N L+H FC++G +R A+ +F  I   G  P+ V+Y TL++GY R   L+E 
Sbjct: 112 GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSAVSYNTLMNGYIRLGVLDEG 171

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            RL+  M A GV P V TY+ ++  LCKE ++ DA+ L +EM  K + P+ VT  TLI+ 
Sbjct: 172 FRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDADELFDEMLVKGLVPNGVTFTTLIDG 231

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +CK G    AM++  +ML   L+ D  TY  LI+G CK  ++  A +L+  M   G  P 
Sbjct: 232 HCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSRKGLKPD 291

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ L+DG C +    +  +     +   + +D  VY ALI   C++ +   A+++  
Sbjct: 292 KITYTTLIDGCCKEGVLVSAFEHRKRLIQENIRLDDVVYTALISGLCQEGRSVDAEKMLR 351

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
            M   G+  D+  YT +   + + G+    S +L +M R
Sbjct: 352 EMLSVGLNPDTGTYTMIINEFCKKGDVWKGSKLLKEMQR 390



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 85/168 (50%)

Query: 377 NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD 436
           N L++ +CK GD   A  V + + + GL     +Y  L++G+ +   +D    L   ML 
Sbjct: 121 NILMHRFCKDGDIRVAQSVFDAITKWGLRPSAVSYNTLMNGYIRLGVLDEGFRLKSAMLA 180

Query: 437 AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDY 496
           +G  P   +YS L++G C ++  +   +L DE + +GL  +   +  LI   CK  +VD 
Sbjct: 181 SGVQPDVYTYSVLINGLCKESKMDDADELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDL 240

Query: 497 AQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL 544
           A  ++  M    +L D + Y +L Y   + G+ K   D++DDM R+ L
Sbjct: 241 AMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSRKGL 288



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 66/139 (47%), Gaps = 3/139 (2%)

Query: 141 ANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANI 200
            +LK   D   + D M    L P     T L++   K+ +    ++  K+++Q  +  + 
Sbjct: 271 GDLKQAHD---LIDDMSRKGLKPDKITYTTLIDGCCKEGVLVSAFEHRKRLIQENIRLDD 327

Query: 201 HLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDR 260
            +Y  LI   C+       EK+L EM    +  D  TY  +I  +CKKG  ++   +   
Sbjct: 328 VVYTALISGLCQEGRSVDAEKMLREMLSVGLNPDTGTYTMIINEFCKKGDVWKGSKLLKE 387

Query: 261 MEREGISPDIVTYNSLIHG 279
           M+R+G  P +VTYN L++G
Sbjct: 388 MQRDGHVPSVVTYNVLMNG 406


>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
          Length = 649

 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 124/406 (30%), Positives = 208/406 (51%), Gaps = 2/406 (0%)

Query: 122 IHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLT 181
           +  D + N++ L+ +V  Y           V  +M    + P +    VL+++  +    
Sbjct: 149 LSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDV 208

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
           D    +   M   G+   I  YN ++   CK    DK +++   M+   V  D+ ++N L
Sbjct: 209 DAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNIL 268

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGA-- 299
           I  +C+ G   EA+     M+   ++PD+V+++ LI  F R G M  A    R++KG   
Sbjct: 269 IGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGL 328

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
            P+ V YT +I G+CRA  + EALR+R+ M   G  P VVTYN++L  LCK+ R+ DA +
Sbjct: 329 VPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEK 388

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
           LLNEM E+ + PD  T  TLI+ YC+ G+  +A+++ + +L   L  D  TY +LI G C
Sbjct: 389 LLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMC 448

Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
           +  ++  A EL   M      P++ +YS L+D +C K   E     LDE V +G   ++ 
Sbjct: 449 RKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIR 508

Query: 480 VYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWR 525
            Y ++I+ +C+   V   Q+    M+ + +  D + + +L + Y +
Sbjct: 509 TYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIK 554



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 124/469 (26%), Positives = 235/469 (50%), Gaps = 4/469 (0%)

Query: 98  QNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMR 157
           Q++L +++ R   S   ++++L+     P     V   L+  Y   +  ++  + F  + 
Sbjct: 57  QSLLLRMSRRRGASRREIVSSLLA--SSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLL 114

Query: 158 VHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVD 217
            H +     A   LL  L++     +  + Y+ ++      N +  N+++H+ CK+ + D
Sbjct: 115 DHRVPVPASASNALLAVLSRAGWPHLAQEAYRLVLSSDSEVNAYTLNIMVHSYCKTLEFD 174

Query: 218 KVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLI 277
             + ++ EME + V  D+ T+N LI    + G    A+A+ D M   G+ P IVTYNS++
Sbjct: 175 GADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVL 234

Query: 278 HGFCREGRMREARRLFR--DIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVY 335
            G C+  R  +A+ +FR  D     P+  ++  LI G+CR  +++EA++  + M  + V 
Sbjct: 235 KGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVT 294

Query: 336 PGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKV 395
           P VV+++ ++    + G +  A   L EM    + PD V    +I  +C+ G  + A++V
Sbjct: 295 PDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRV 354

Query: 396 KNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCN 455
           ++ M+  G + D  TY  L++G CK   +  A++LL  M + G +P  C+++ L+ GYC 
Sbjct: 355 RDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCR 414

Query: 456 KNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVI 515
           + N E  L+L D  + + L  DV  Y +LI   C+K  +  A  L++ M    IL + + 
Sbjct: 415 QGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHIT 474

Query: 516 YTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
           Y+ L  ++   G+ +     LD+M ++  +  ++ Y S    Y +   +
Sbjct: 475 YSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNV 523



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 110/325 (33%), Positives = 173/325 (53%), Gaps = 2/325 (0%)

Query: 155 QMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSS 214
           +M+   L+P     T+++    +        +V  +MV  G + ++  YN L++  CK  
Sbjct: 322 EMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQH 381

Query: 215 DVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYN 274
            +   EKLL EME + V  DL T+ TLI  YC++G    AL + D + R+ + PD+VTYN
Sbjct: 382 RLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYN 441

Query: 275 SLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAK 332
           SLI G CR+G + +A  L+ D+  +   PNH+TY+ LID +C    +E+A    + M  K
Sbjct: 442 SLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKK 501

Query: 333 GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
           G  P + TYNSI++  C+ G ++   + L +M +  + PD +T NTLI+ Y K  +   A
Sbjct: 502 GNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGA 561

Query: 393 MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
             V N M +  +  D  TY  +I+GF +   M  A  +  GM D+G  P   +Y  L++G
Sbjct: 562 FNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLING 621

Query: 453 YCNKNNEEALLKLLDEFVSRGLCVD 477
           +    N +   +L DE + RG   D
Sbjct: 622 HVTAGNSKQAFQLHDEMIHRGFAPD 646



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 118/430 (27%), Positives = 210/430 (48%), Gaps = 37/430 (8%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           + + D M    L P +     +L  L K R  D   +V++ M Q  V  ++  +N+LI  
Sbjct: 212 IALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGG 271

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY------------------------ 245
            C+  +V +  K   EM+ + V  D+ +++ LI L+                        
Sbjct: 272 FCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPD 331

Query: 246 -----------CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR 294
                      C+ G   EAL V+D M   G  PD+VTYN+L++G C++ R+ +A +L  
Sbjct: 332 GVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLN 391

Query: 295 DI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEG 352
           ++  +G TP+  T+TTLI GYCR  + E AL+L + +  + + P VVTYNS++  +C++G
Sbjct: 392 EMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKG 451

Query: 353 RIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYK 412
            +  AN L ++M+ ++I P+++T + LI+++C+ G    A    + M++ G + +  TY 
Sbjct: 452 DLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYN 511

Query: 413 ALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSR 472
           ++I G+C++  +   ++ L  M      P   +++ L+ GY  + N      + +     
Sbjct: 512 SIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKE 571

Query: 473 GLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKAC 532
            +  D   Y  +I  F ++  +  A R+F  M  +GI  D   Y SL   +  AG  K  
Sbjct: 572 MVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQA 631

Query: 533 SDILDDMYRR 542
             + D+M  R
Sbjct: 632 FQLHDEMIHR 641



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 93/341 (27%), Positives = 161/341 (47%), Gaps = 2/341 (0%)

Query: 230 DVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA 289
           D   + +T N ++  YCK      A  V   ME+  + PD+VT+N LI    R G +  A
Sbjct: 152 DSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAA 211

Query: 290 RRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRK 347
             L   +  +G  P  VTY +++ G C+    ++A  +   M    V P V ++N ++  
Sbjct: 212 IALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGG 271

Query: 348 LCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLD 407
            C+ G +++A +   EM  + + PD V+ + LI  + + G+   A      M   GL+ D
Sbjct: 272 FCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPD 331

Query: 408 QFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLD 467
              Y  +I GFC+A  M  A  +   M+  G  P   +Y+ L++G C ++      KLL+
Sbjct: 332 GVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLN 391

Query: 468 EFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
           E   RG+  D+  +  LI  +C++   + A +LF+ +    +  D V Y SL     R G
Sbjct: 392 EMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKG 451

Query: 528 EPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLF 568
           +    +++ DDM+ R ++     Y     S+ +  ++ D F
Sbjct: 452 DLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAF 492



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 62/244 (25%), Positives = 120/244 (49%), Gaps = 2/244 (0%)

Query: 132 VLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKM 191
             + L+  Y      ++ LQ+FD +    L P +     L++ + +        +++  M
Sbjct: 404 TFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDM 463

Query: 192 VQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMH 251
               ++ N   Y++LI + C+   V+     L EM  K    ++ TYN++I  YC+ G  
Sbjct: 464 HAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNV 523

Query: 252 YEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKG--ATPNHVTYTTL 309
            +      +M ++ + PD++T+N+LIHG+ +E  M  A  +F  ++     P+ VTY  +
Sbjct: 524 KKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMI 583

Query: 310 IDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI 369
           I+G+    ++++A R+ + M   G+ P   TY S++      G  + A +L +EM  +  
Sbjct: 584 INGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMIHRGF 643

Query: 370 APDN 373
           APD+
Sbjct: 644 APDD 647


>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
          Length = 1024

 Score =  224 bits (571), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 151/560 (26%), Positives = 276/560 (49%), Gaps = 12/560 (2%)

Query: 13  FIKTISAIMLKGHWAKLL-NPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAES-- 69
           F + IS  + + +W  ++ + +I S L    I  VL    N    P     FF W++S  
Sbjct: 43  FSQQISDFLKQNNWKTIMVSSHIPSKLNPDVIRAVLHQ--NQVGDPKRLLDFFYWSQSQM 100

Query: 70  AVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGN 129
            VP +   L S   +   L  ++ F  A  +L ++ +R   S+ S+L++++    +  G+
Sbjct: 101 GVPQF---LDSFSILAVQLCNSELFGLANGVLTQM-IRTPYSSSSILDSVLFWFRNYGGS 156

Query: 130 SHVL-SWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           S V+   L+  Y  + M  +   VF   +  +++  L  C  LL  L K  + ++ WKVY
Sbjct: 157 SPVVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLLKDLLKCGMMELFWKVY 216

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
             M+   +  +++ Y  L+ A CK+ D+   +++L EM+ K +  + F Y+ +I   C+ 
Sbjct: 217 NGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQV 276

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTY 306
           G   EA+ ++  M  +G+ P+  TY  +  G CR  RM EA+  F +++  G  P++   
Sbjct: 277 GDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNAC 336

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
           + LIDG+ R  D++E LR+++VM + G+   ++TYN ++  LCK G++  A  +L  M  
Sbjct: 337 SALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVT 396

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
               P++ T   LI  YC+  +   A+++ + M +  L+    +Y A+I+G C  K++ +
Sbjct: 397 LGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSL 456

Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
           A +LL  M  +G  P+   YS L+  Y ++   E   +LLD     G+  D+  Y A+I 
Sbjct: 457 ANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIIS 516

Query: 487 RFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMI 546
              K  K++ A      +QG G+  D+V + +    Y + G+    +   D+M    LM 
Sbjct: 517 CLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMP 576

Query: 547 TLKIYRSFSASYAKDNEILD 566
              +Y      + K   +++
Sbjct: 577 NNPLYTVLINGHFKAGNLME 596



 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 137/478 (28%), Positives = 238/478 (49%), Gaps = 17/478 (3%)

Query: 115 VLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNS 174
           +L  +V +   P  NS     L+  Y         L++ D+M   NL+P   +   ++N 
Sbjct: 390 ILKGMVTLGCKP--NSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMING 447

Query: 175 LAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRAD 234
           L   +   +  K+ +KM   G+  N+ +Y++LI A      +++  +LL  M    V  D
Sbjct: 448 LCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPD 507

Query: 235 LFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR 294
           +F YN +I+   K G   EA      ++  G+ PD VT+ + I G+ + G+M EA + F 
Sbjct: 508 IFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFD 567

Query: 295 DI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEG 352
           ++   G  PN+  YT LI+G+ +A +L EAL +   + A GV P V T ++ +  L K G
Sbjct: 568 EMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNG 627

Query: 353 RIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYK 412
           R+++A ++ +E+ EK + PD  T ++LI+ +CK G+   A ++ + M   G+  + F Y 
Sbjct: 628 RVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYN 687

Query: 413 ALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSR 472
           AL+ G CK+ ++  A++L  GM + G  P   +YS ++DGYC   N      L  E  S+
Sbjct: 688 ALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSK 747

Query: 473 GLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKAC 532
           G+     VY AL+   CK+  ++ A  LF  M   G    ++ + +L   Y ++ + +  
Sbjct: 748 GVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKG-FATTLSFNTLIDGYCKSCKIQEA 806

Query: 533 SDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKEMQLRN 590
           S +  +M  +++M     Y +          ++D  W     +   +  +FKEMQ RN
Sbjct: 807 SQLFQEMIAKQIMPDHVTYTT----------VID--WHCKAGKMEEANLLFKEMQERN 852



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 130/469 (27%), Positives = 234/469 (49%), Gaps = 40/469 (8%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           ++ ++M    L P++   ++L+ + A +   +   ++   M   GV  +I  YN +I   
Sbjct: 459 KLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCL 518

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGM-------------------- 250
            K+  +++    L E++ + ++ D  T+   I  Y K G                     
Sbjct: 519 SKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNN 578

Query: 251 ---------HY------EALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD 295
                    H+      EAL++  R+   G+ PD+ T ++ IHG  + GR++EA ++F +
Sbjct: 579 PLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSE 638

Query: 296 IK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGR 353
           +K  G  P+  TY++LI G+C+  ++E+A  L + M  KG+ P +  YN+++  LCK G 
Sbjct: 639 LKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGD 698

Query: 354 IRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKA 413
           I+ A +L + M EK + PD+VT +T+I+ YCK  + A A  + + M   G+    F Y A
Sbjct: 699 IQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNA 758

Query: 414 LIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
           L+HG CK  +M+ A  L   ML  GF+ +  S++ L+DGYC     +   +L  E +++ 
Sbjct: 759 LVHGCCKEGDMEKAMNLFREMLQKGFATTL-SFNTLIDGYCKSCKIQEASQLFQEMIAKQ 817

Query: 474 LCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACS 533
           +  D   Y  +I   CK  K++ A  LF  MQ   ++ D+V YTSL Y Y + G+     
Sbjct: 818 IMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVF 877

Query: 534 DILDDMYRRRLMITLKIYRSFSASYAKDNEILDLF--WSHVVDRGLMSK 580
            + + M  + +      Y     ++ K++ +++ F     VV +G+++K
Sbjct: 878 ALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTK 926



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 132/432 (30%), Positives = 222/432 (51%), Gaps = 7/432 (1%)

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
            ++ Y+      +  + FD+M  H LMP+    TVL+N   K         +++++  LG
Sbjct: 549 FILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALG 608

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
           V+ ++   +  IH   K+  V +  K+  E++ K +  D+FTY++LI+ +CK+G   +A 
Sbjct: 609 VLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAF 668

Query: 256 AVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGY 313
            + D M  +GI+P+I  YN+L+ G C+ G ++ AR+LF  +  KG  P+ VTY+T+IDGY
Sbjct: 669 ELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGY 728

Query: 314 CRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDN 373
           C++ ++ EA  L   M +KGV P    YN+++   CKEG +  A  L  EM +K  A   
Sbjct: 729 CKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFAT-T 787

Query: 374 VTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFG 433
           ++ NTLI+ YCK      A ++   M+   +M D  TY  +I   CKA +M+ A  L   
Sbjct: 788 LSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKE 847

Query: 434 MLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEK 493
           M +        +Y+ L+ GY        +  L ++ V++G+  D   Y  +I   CK++ 
Sbjct: 848 MQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDN 907

Query: 494 VDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITL----K 549
           +  A +L + + G G+L    I+  L  A  +  +    S +LD+M    L  +L     
Sbjct: 908 LVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNT 967

Query: 550 IYRSFSASYAKD 561
           + RSF  +   D
Sbjct: 968 LVRSFHEAGKMD 979



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 131/447 (29%), Positives = 225/447 (50%), Gaps = 18/447 (4%)

Query: 76   HSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSW 135
            H L  +  +  +L  N HFK A N++E +++   L    VL         PD    V + 
Sbjct: 572  HGLMPNNPLYTVLI-NGHFK-AGNLMEALSIFRRLHALGVL---------PD----VQTC 616

Query: 136  LVIFYANLK--MTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQ 193
                +  LK    Q+ L+VF +++   L+P +   + L++   K    +  ++++ +M  
Sbjct: 617  SAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCL 676

Query: 194  LGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYE 253
             G+  NI +YN L+   CKS D+ +  KL   M  K +  D  TY+T+I  YCK     E
Sbjct: 677  KGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAE 736

Query: 254  ALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD-IKGATPNHVTYTTLIDG 312
            A ++   M  +G+ P    YN+L+HG C+EG M +A  LFR+ ++      +++ TLIDG
Sbjct: 737  AFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDG 796

Query: 313  YCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPD 372
            YC++  ++EA +L + M AK + P  VTY +++   CK G++ +AN L  EM E+ +  D
Sbjct: 797  YCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVD 856

Query: 373  NVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLF 432
             VT  +L+  Y K+G ++    +  +M+  G+  D+ TY  +I+  CK   +  A +L  
Sbjct: 857  TVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRD 916

Query: 433  GMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKE 492
             ++  G       +  L+   C + +     KLLDE    GL   ++    L+R F +  
Sbjct: 917  EVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAG 976

Query: 493  KVDYAQRLFNLMQGNGILGDSVIYTSL 519
            K+D A R+F  ++  G++ D+     L
Sbjct: 977  KMDEATRVFEGVKSLGLVPDTTTLIDL 1003


>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
           Japonica Group]
 gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
           Japonica Group]
 gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
          Length = 648

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 126/420 (30%), Positives = 211/420 (50%), Gaps = 2/420 (0%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           V  +M    + P +    V++++  +    +    +   MV  G+   I  YN ++   C
Sbjct: 178 VISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLC 237

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           +S   DK  ++  EM+   V  D+ ++  LI  +C+ G   EAL +   M   GI PD+V
Sbjct: 238 RSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLV 297

Query: 272 TYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           +++ LI  F R G+M  A    R+++  G  P+ V YT +I G+CRA  + +ALR+R+ M
Sbjct: 298 SFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEM 357

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
              G  P VVTYN++L  LCKE R+ DA  LLNEM E+ + PD  T  TLI+ YC  G  
Sbjct: 358 VGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKL 417

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
             A+++ + ML   L  D  TY  LI G C+  ++D A +L   M      P++ +YS L
Sbjct: 418 DKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSIL 477

Query: 450 VDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGI 509
           +D +C K   E     LDE +++G+  ++  Y ++I+ +C+   V   Q+    M  N +
Sbjct: 478 IDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKV 537

Query: 510 LGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFW 569
             D + Y +L + Y +  +      +L+ M + ++   +  Y      ++    + +  W
Sbjct: 538 SPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGW 597



 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 119/430 (27%), Positives = 214/430 (49%), Gaps = 37/430 (8%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           + + D M    L P +     +L  L +  + D  W+V+K+M   GV  ++  + +LI  
Sbjct: 211 MALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGG 270

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY------------------------ 245
            C+  ++++  K+  EM  + ++ DL +++ LI L+                        
Sbjct: 271 FCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPD 330

Query: 246 -----------CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR 294
                      C+ G+  +AL V+D M   G  PD+VTYN+L++G C+E R+ +A  L  
Sbjct: 331 GVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLN 390

Query: 295 DIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEG 352
           +++  G  P+  T+TTLI GYC    L++AL+L + M  + + P +VTYN+++  +C++G
Sbjct: 391 EMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQG 450

Query: 353 RIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYK 412
            +  AN L ++M+ ++I P++VT + LI+++C+ G    A    + M+  G++ +  TY 
Sbjct: 451 DLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYN 510

Query: 413 ALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSR 472
           ++I G+C++  +   ++ L  M+    SP   +Y+ L+ GY  ++      KLL+     
Sbjct: 511 SIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKE 570

Query: 473 GLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKAC 532
            +  DV  Y  LI  F     V  A  +F  M   GI  D   Y S+   +  AG  K  
Sbjct: 571 KVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEA 630

Query: 533 SDILDDMYRR 542
             + D+M +R
Sbjct: 631 FQLHDEMLQR 640



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 122/469 (26%), Positives = 237/469 (50%), Gaps = 4/469 (0%)

Query: 98  QNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMR 157
           Q++L +++ R       ++++L  +   P     V   L+  Y   +  ++  + F  + 
Sbjct: 56  QSLLLRMSRRRGACRREIVSSL--LGSSPTPQPRVFDLLIRTYTQSRKPREAFEAFRLIL 113

Query: 158 VHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVD 217
            H +     A   LL +L++     +    Y+ +       N +  N+++H  CK+ + D
Sbjct: 114 DHRVPIPAAASNALLAALSRAGWPHLAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFD 173

Query: 218 KVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLI 277
           KV+ ++ EME + V  D+ T+N ++    + G    A+A+ D M  +G+ P IVTYNS++
Sbjct: 174 KVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVL 233

Query: 278 HGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVY 335
            G CR G   +A  +F+++   G  P+  ++T LI G+CR  ++EEAL++ + M  +G+ 
Sbjct: 234 KGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIK 293

Query: 336 PGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKV 395
           P +V+++ ++    + G++  A   L EM    + PD V    +I  +C+ G  + A++V
Sbjct: 294 PDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRV 353

Query: 396 KNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCN 455
           ++ M+  G + D  TY  L++G CK + +  A+ LL  M + G  P  C+++ L+ GYC 
Sbjct: 354 RDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCI 413

Query: 456 KNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVI 515
           +   +  L+L D  +++ L  D+  Y  LI   C++  +D A  L++ M    I  + V 
Sbjct: 414 EGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVT 473

Query: 516 YTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
           Y+ L  ++   G+ +     LD+M  + ++  +  Y S    Y +   +
Sbjct: 474 YSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNV 522



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 112/347 (32%), Positives = 175/347 (50%), Gaps = 2/347 (0%)

Query: 133 LSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMV 192
            S L+  +A        +    +MR   L+P     T+++    +  L     +V  +MV
Sbjct: 299 FSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMV 358

Query: 193 QLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHY 252
             G + ++  YN L++  CK   +   E LL EM  + V  DL T+ TLI  YC +G   
Sbjct: 359 GCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLD 418

Query: 253 EALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLI 310
           +AL + D M  + + PDIVTYN+LI G CR+G + +A  L+ D+  +   PNHVTY+ LI
Sbjct: 419 KALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILI 478

Query: 311 DGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIA 370
           D +C    +E+A    + M  KG+ P ++TYNSI++  C+ G +    + L +M   K++
Sbjct: 479 DSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVS 538

Query: 371 PDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL 430
           PD +T NTLI+ Y K      A K+ N M +  +  D  TY  LI+GF     +  A  +
Sbjct: 539 PDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWI 598

Query: 431 LFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVD 477
              M   G  P   +Y  +++G+    N +   +L DE + RG   D
Sbjct: 599 FEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPD 645



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 68/226 (30%), Positives = 118/226 (52%), Gaps = 2/226 (0%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           LQ+FD M    L P +     L++ + +    D    ++  M    +  N   Y++LI +
Sbjct: 421 LQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDS 480

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
            C+   V+     L EM  K +  ++ TYN++I  YC+ G   +      +M    +SPD
Sbjct: 481 HCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPD 540

Query: 270 IVTYNSLIHGFCREGRMREARRLFR--DIKGATPNHVTYTTLIDGYCRANDLEEALRLRE 327
           ++TYN+LIHG+ +E +M +A +L    + +   P+ VTY  LI+G+    +++EA  + E
Sbjct: 541 LITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFE 600

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDN 373
            M AKG+ P   TY S++      G  ++A +L +EM ++  APD+
Sbjct: 601 KMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPDD 646


>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 988

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 168/593 (28%), Positives = 278/593 (46%), Gaps = 29/593 (4%)

Query: 8   NSDTKFIKTISAIMLKGH---WAKLLNPNIASSL-----TSTAIHKVLLNLYNCC-HIPS 58
           +S T F KTI+ + LK H   +    NP I +S+     ++    + LL + N   H P 
Sbjct: 8   SSTTFFSKTIT-LFLKPHFRFYPFSTNPQIDNSVNPHFHSAVTQPEFLLRVLNSVKHRPL 66

Query: 59  LSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNA 118
            +  FF+W E   PN+  S  +   ++ IL KN   K A  ++EK    +      VL+ 
Sbjct: 67  TALRFFRWVEKQ-PNFHRSETAFVAILDILAKNGFMKPAYWVMEKAI--EVKVDGGVLDV 123

Query: 119 LVKIH--DDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLA 176
           LV I    + + +  +L  L+  +A   + +  L VF +M  + L+P +  C  +L  L 
Sbjct: 124 LVGIGCGRNSEVSVKLLDLLIQVFAKKLILEKCLMVFYKMVNNGLLPDVRNCNRVLKLLK 183

Query: 177 KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLF 236
              + + V +VY  M++  +   I  +N ++ + CK  +V +  ++L  M       +  
Sbjct: 184 DKSMVNEVEEVYSVMIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDV 243

Query: 237 TYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI 296
           +YN L+     KG    A  + ++M   G+     TYN LI GFC++    EA  L R++
Sbjct: 244 SYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREM 303

Query: 297 --KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRI 354
             +GA P  VTY T++   CR   + +A R  +VM  + + P +V+YN+++    + G  
Sbjct: 304 LGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNF 363

Query: 355 RDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKAL 414
            +A  L +E+  K + P  VT NTLI+  C+ G+   A  +K+ M++ GL  D  T+  L
Sbjct: 364 AEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTIL 423

Query: 415 IHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGL 474
           + GFC+   + +AKEL   ML  G  P   +Y+  + G     N      + +E  + G 
Sbjct: 424 VRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGF 483

Query: 475 CVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSD 534
             D+  Y  LI   CK    D A  L   M+  GI+ D V YTS+ +A+  +G  +   +
Sbjct: 484 PPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEE 543

Query: 535 ILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKEMQ 587
           +  DM ++ +  ++  Y     SYA            V  R   +K  F EMQ
Sbjct: 544 VFSDMLKKGIHPSVVTYTVLIHSYA------------VRGRLDFAKKYFDEMQ 584



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 130/431 (30%), Positives = 201/431 (46%), Gaps = 43/431 (9%)

Query: 149 GLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIH 208
            ++V D MR+    P+  +  VL+N L+     D   ++ ++M  LG+  + H YN LI 
Sbjct: 226 AVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIR 285

Query: 209 ACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISP 268
             CK    ++   L  EM  +     + TYNT++   C+ G   +A    D M  E + P
Sbjct: 286 GFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMP 345

Query: 269 DIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLR 326
           D+V+YN+LI+G+ R G   EA  LF ++  K   P+ VTY TLIDG CR  +L+ A  ++
Sbjct: 346 DLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMK 405

Query: 327 EVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM---------------------- 364
           + M   G+ P VVT+  ++R  C+ G +  A  L +EM                      
Sbjct: 406 DDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKL 465

Query: 365 -NEKK------------IAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
            N  K              PD +T N LIN  CK+G+   A ++  +M   G++ D  TY
Sbjct: 466 GNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTY 525

Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
            ++IH    +  +  A+E+   ML  G  PS  +Y+ L+  Y  +   +   K  DE   
Sbjct: 526 TSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQD 585

Query: 472 RGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLA-----YAYWRA 526
           +G+  +V  Y ALI   CK+  +D A  LF  M+  G+  +   YT L        YW+ 
Sbjct: 586 KGVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQD 645

Query: 527 GEPKACSDILD 537
              K   D+LD
Sbjct: 646 AL-KLYKDMLD 655



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 112/406 (27%), Positives = 190/406 (46%), Gaps = 37/406 (9%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           ++ +QM +  L    H    L+    K  + +    + ++M+  G +  +  YN ++++ 
Sbjct: 263 ELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSL 322

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL--------------- 255
           C+   V    + L  M  +D+  DL +YNTLI  Y + G   EAL               
Sbjct: 323 CRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSV 382

Query: 256 --------------------AVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD 295
                                ++D M + G+ PD+VT+  L+ GFC+ G +  A+ LF +
Sbjct: 383 VTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDE 442

Query: 296 I--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGR 353
           +  +G  P+ + YTT I G  +  +  +A  ++E M A+G  P ++TYN ++  LCK G 
Sbjct: 443 MLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGN 502

Query: 354 IRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKA 413
             DAN L+ +M  + I PD+VT  ++I+A+   G    A +V + ML+ G+     TY  
Sbjct: 503 FDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTV 562

Query: 414 LIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
           LIH +     +D AK+    M D G SP+  +Y+ L+ G C +N  +    L  E  S+G
Sbjct: 563 LIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKG 622

Query: 474 LCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
           +  +   Y  LI      +    A +L+  M    I  DS  +++L
Sbjct: 623 VSPNKYTYTILINENSNLQYWQDALKLYKDMLDREIKPDSCTHSAL 668


>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
          Length = 731

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 123/357 (34%), Positives = 192/357 (53%), Gaps = 2/357 (0%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           ++ L +   MR     P++     L+ +  +    D   ++   M + G+  N+  +N +
Sbjct: 207 KEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSM 266

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           ++  CK+  ++   K+  EM  + +  D  +YNTL+  YCK G  +EAL+V   M ++GI
Sbjct: 267 VNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGI 326

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALR 324
            PD+VT+ SLIH  C+ G +  A  L R ++  G   N VT+T LIDG+C+   L++AL 
Sbjct: 327 MPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALL 386

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
               M    + P VV YN+++   C  GR+ +A  LL+EM  K + PD VT +T+I+AYC
Sbjct: 387 AVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYC 446

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           K  DT SA ++  +MLE G++ D  TY +LI   C  K +  A  L   M+  G  P   
Sbjct: 447 KNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEF 506

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
           +Y+ L+DG+C + N E+ L L D+ V  G+  DV  Y  LI    K  +   AQ+L 
Sbjct: 507 TYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLL 563



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 117/392 (29%), Positives = 202/392 (51%), Gaps = 3/392 (0%)

Query: 162 MPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEK 221
           +P + A   +L +L+   LT    + +  M+  GV  N++ YN+L+ A C      +   
Sbjct: 153 VPSVLAYNAVLLALSDASLTS-ARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALS 211

Query: 222 LLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFC 281
           +L +M       ++ TYNTL+A + + G    A  +   M   G+ P++VT+NS+++G C
Sbjct: 212 ILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMC 271

Query: 282 REGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVV 339
           + G+M +AR++F ++  +G  P+ V+Y TL+ GYC+A    EAL +   M  KG+ P VV
Sbjct: 272 KAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVV 331

Query: 340 TYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRM 399
           T+ S++  +CK G +  A  L+ +M E+ +  + VT   LI+ +CK G    A+     M
Sbjct: 332 TFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGM 391

Query: 400 LEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNE 459
            +  +      Y ALI+G+C    MD A+ELL  M   G  P   +YS ++  YC   + 
Sbjct: 392 KQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDT 451

Query: 460 EALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
            +  +L  + + +G+  D   Y +LIR  C ++++  A  LF  M   G+  D   YTSL
Sbjct: 452 HSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSL 511

Query: 520 AYAYWRAGEPKACSDILDDMYRRRLMITLKIY 551
              + + G  ++   + D M +  ++  +  Y
Sbjct: 512 IDGHCKEGNVESALSLHDKMVKAGVLPDVVTY 543



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 118/450 (26%), Positives = 196/450 (43%), Gaps = 58/450 (12%)

Query: 115 VLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNS 174
           V + +V+    PDG S+  + LV  Y     + + L VF +M    +MP +   T L++ 
Sbjct: 282 VFDEMVREGLAPDGVSY--NTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHV 339

Query: 175 LAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRAD 234
           + K    +    + ++M + G+  N   +  LI   CK   +D     +  M+   ++  
Sbjct: 340 MCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPS 399

Query: 235 LFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR------------ 282
           +  YN LI  YC  G   EA  +   ME +G+ PD+VTY+++I  +C+            
Sbjct: 400 VVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQ 459

Query: 283 -----------------------EGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRAN 317
                                  E R+ +A  LF+++   G  P+  TYT+LIDG+C+  
Sbjct: 460 QMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEG 519

Query: 318 DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCN 377
           ++E AL L + M   GV P VVTY+ ++  L K  R  +A +LL ++  +   P N   +
Sbjct: 520 NVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYD 579

Query: 378 TLIN---------------AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAK 422
            L++                +C  G    A KV   ML+    LD   Y  LIHG C+A 
Sbjct: 580 ALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAG 639

Query: 423 EMDIAKELLF--GMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSV 480
             ++ K L F   ML  GF+P+  S   L+ G           +++ + ++     D   
Sbjct: 640 --NVMKALSFHKQMLQGGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNYCSLADAEA 697

Query: 481 YRALIRRFCKKEKVDYAQRLFNLMQGNGIL 510
            +ALI     +  VD    + + M  +G+L
Sbjct: 698 SKALIDLNLNEGNVDAVLDVLHGMAKDGLL 727



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 90/322 (27%), Positives = 147/322 (45%), Gaps = 5/322 (1%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEA 322
           G  P ++ YN+++     +  +  ARR F  +   G  PN  TY  L+   C     +EA
Sbjct: 151 GYVPSVLAYNAVLLAL-SDASLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 209

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
           L +   M   G  P VVTYN+++    + G +  A RL+  M E  + P+ VT N+++N 
Sbjct: 210 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNG 269

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
            CK G    A KV + M+  GL  D  +Y  L+ G+CKA     A  +   M   G  P 
Sbjct: 270 MCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPD 329

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +++ L+   C   N E  + L+ +   RGL ++   + ALI  FCKK  +D A     
Sbjct: 330 VVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVR 389

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDN 562
            M+   I    V Y +L   Y   G      ++L +M  + L   +  Y +  ++Y K+ 
Sbjct: 390 GMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNC 449

Query: 563 EILDLFW--SHVVDRGLMSKHI 582
           +    F     ++++G++   I
Sbjct: 450 DTHSAFELNQQMLEKGVLPDAI 471


>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 133/425 (31%), Positives = 223/425 (52%), Gaps = 9/425 (2%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDR-------LTDMVWKVYKKMVQLGVVANIHLY 203
           ++FD+M  + L+  + +C + ++ L++D          + V K+ ++M   G+  N + Y
Sbjct: 167 KLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKGEWVLKLIEEMQIKGLKPNPYTY 226

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER 263
           N +I   CK+  V + E++L EM  + +  D   Y TLI  +CK G    A  + D M++
Sbjct: 227 NGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQK 286

Query: 264 EGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEE 321
             ISPD +TY ++I G C+ GR+ EA +LF ++  K   P+ VTYT LIDGYC+   ++E
Sbjct: 287 RKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKE 346

Query: 322 ALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
           A  L   M   G+ P +VTY ++   LCK G +  AN LL+EM  K +  +  T N+L+N
Sbjct: 347 AFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVN 406

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
             CK G+   A+K+   M  AG   D  TY  L+  +CK++EM  A ELL  MLD    P
Sbjct: 407 GLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQP 466

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
           +  +++ L++G+C     E   KLL   + +G+  + + Y +LI+++C +  +     ++
Sbjct: 467 TVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIY 526

Query: 502 NLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKD 561
             M   G++ D   Y  L   + +A   K    +  DM  +   +T+  Y +    + K 
Sbjct: 527 RGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKR 586

Query: 562 NEILD 566
            + L+
Sbjct: 587 KKFLE 591



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 149/527 (28%), Positives = 255/527 (48%), Gaps = 28/527 (5%)

Query: 46  VLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIA 105
           VL+N+ N      L  +FF+WA         SL++   +  I T +K  K A+ +++   
Sbjct: 100 VLMNIKNDYR---LVLSFFEWA---CLRRDPSLEARCIVAQIATASKDLKMARKLIQ--- 150

Query: 106 LRDFLSTPSV---LNALVKIHDDPDGNSHVLSW--LVIFYANLKMTQDG----------L 150
             DF   P++   ++   K+ D       ++S     +F ++L    DG          L
Sbjct: 151 --DFWVNPNLDVGVSFARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKGEWVL 208

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           ++ ++M++  L P+ +    ++  L K        +V ++M+  G+  +  +Y  LI   
Sbjct: 209 KLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGF 268

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           CK  +V    +L  EM+ + +  D  TY  +I   C+ G   EA  +   M  + + PD 
Sbjct: 269 CKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDE 328

Query: 271 VTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
           VTY +LI G+C+EG+M+EA  L   +   G TPN VTYT L DG C+  +++ A  L   
Sbjct: 329 VTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHE 388

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M  KG+   + TYNS++  LCK G I  A +L+ +M      PD VT  TL++AYCK  +
Sbjct: 389 MCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSRE 448

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
              A ++  +ML+  L     T+  L++GFC +  ++  ++LL  ML+ G  P+  +Y+ 
Sbjct: 449 MVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNS 508

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG 508
           L+  YC +NN  A  ++     ++G+  D + Y  LI+  CK   +  A  L   M G G
Sbjct: 509 LIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKG 568

Query: 509 ILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFS 555
                  Y +L   +++  +     ++ + M R  L+   +IY  F+
Sbjct: 569 FNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFA 615



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 117/412 (28%), Positives = 207/412 (50%), Gaps = 2/412 (0%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N +  + +++         +  +V  +M    + P     T L++   K       ++++
Sbjct: 222 NPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLF 281

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
            +M +  +  +   Y  +I   C++  V + +KL  EM  K +  D  TY  LI  YCK+
Sbjct: 282 DEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKE 341

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTY 306
           G   EA ++ ++M + G++P+IVTY +L  G C+ G +  A  L  ++  KG   N  TY
Sbjct: 342 GKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTY 401

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
            +L++G C+A ++++A++L + M   G +P  VTY +++   CK   +  A+ LL +M +
Sbjct: 402 NSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLD 461

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
           +++ P  VT N L+N +C  G      K+   MLE G+M +  TY +LI  +C    M  
Sbjct: 462 RELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRA 521

Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
             E+  GM   G  P   +Y+ L+ G+C   N +    L  + V +G  + VS Y ALI+
Sbjct: 522 TTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIK 581

Query: 487 RFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDD 538
            F K++K   A+ LF  M+  G++ D  IY   A   +  G+ +   ++ D+
Sbjct: 582 GFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLELCDE 633



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 100/332 (30%), Positives = 160/332 (48%), Gaps = 2/332 (0%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           ++F +M    L P     T L++   K+      + ++ +M+Q+G+  NI  Y  L    
Sbjct: 314 KLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGL 373

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           CK  +VD   +LL EM  K +  +++TYN+L+   CK G   +A+ +   ME  G  PD 
Sbjct: 374 CKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDA 433

Query: 271 VTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
           VTY +L+  +C+   M  A  L R +  +   P  VT+  L++G+C +  LE+  +L + 
Sbjct: 434 VTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKW 493

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M  KG+ P   TYNS++++ C    +R    +   M  K + PD  T N LI  +CK  +
Sbjct: 494 MLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARN 553

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
              A  +   M+  G  L   +Y ALI GF K K+   A+EL   M   G       Y+ 
Sbjct: 554 MKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNI 613

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSV 480
             D   ++   E  L+L DE + + L  D+  
Sbjct: 614 FADINYDEGKMELTLELCDEAIEKCLVGDIQT 645



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 104/232 (44%), Gaps = 2/232 (0%)

Query: 149 GLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIH 208
            +++   M V    P     T L+++  K R      ++ ++M+   +   +  +NVL++
Sbjct: 417 AVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMN 476

Query: 209 ACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISP 268
             C S  ++  EKLL  M  K +  +  TYN+LI  YC +        +   M  +G+ P
Sbjct: 477 GFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVP 536

Query: 269 DIVTYNSLIHGFCREGRMREARRLFRDIKGATPNHV--TYTTLIDGYCRANDLEEALRLR 326
           D  TYN LI G C+   M+EA  L RD+ G   N    +Y  LI G+ +     EA  L 
Sbjct: 537 DGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELF 596

Query: 327 EVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT 378
           E M  +G+      YN        EG++     L +E  EK +  D  T NT
Sbjct: 597 EQMRREGLVADREIYNIFADINYDEGKMELTLELCDEAIEKCLVGDIQTKNT 648


>gi|125542792|gb|EAY88931.1| hypothetical protein OsI_10416 [Oryza sativa Indica Group]
          Length = 796

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 131/430 (30%), Positives = 215/430 (50%), Gaps = 41/430 (9%)

Query: 140 YANLKMTQDGLQVFDQMRVH-NLMPHLHACTVLLNSLAKDR--LTDMVWKVYKKMVQLGV 196
           YA L++     Q+   +R    + P L A   +L++L++    L      V++ +++L +
Sbjct: 145 YARLRLPHLAAQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRL 204

Query: 197 VANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALA 256
             N + +N+L+H  C    +      L  M+   +  D  TYNTL+  +C+KGM  EA A
Sbjct: 205 HPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARA 264

Query: 257 VQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYC 314
           +  RM+R+GI+P   TYN+L+  F R G +++A ++   +   G  P+  TY  L  G C
Sbjct: 265 LLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLC 324

Query: 315 RANDLEEALRLR------------------------------------EVMAAKGVYPGV 338
           +A  ++EA RL+                                    E M  KGV P +
Sbjct: 325 QAGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTL 384

Query: 339 VTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNR 398
           VT+N +++ LCKEG++ +A   L ++ E+ +APD +T NTLI+AYCK G+ A A  + + 
Sbjct: 385 VTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDE 444

Query: 399 MLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNN 458
           M+  GL +D FT   +++  CK K  + A+ELL      GF P   SY  ++  Y  + N
Sbjct: 445 MVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYN 504

Query: 459 EEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTS 518
            E  L+L D+ + R L   +S Y  LI+  C+ E++  A    N     G++ D   Y  
Sbjct: 505 PEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNI 564

Query: 519 LAYAYWRAGE 528
           + +AY + G+
Sbjct: 565 IIHAYCKEGD 574



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 125/430 (29%), Positives = 210/430 (48%), Gaps = 8/430 (1%)

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           LV  +A L   +   +V + M  +   P L    VL   L +    D  +++  +M +LG
Sbjct: 284 LVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMERLG 343

Query: 196 V-VANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEA 254
             + ++  YN L+ AC K        +LL EM  K V+  L T+N ++   CK+G   EA
Sbjct: 344 TALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEA 403

Query: 255 LAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDG 312
           L   +++  EG++PD++TYN+LI  +C+ G + +A  L  ++  KG   +  T  T++  
Sbjct: 404 LGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYN 463

Query: 313 YCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPD 372
            C+    E+A  L      +G  P  V+Y +++    KE     A RL ++M E+K+ P 
Sbjct: 464 LCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPS 523

Query: 373 NVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLF 432
             T NTLI   C++     A+   N  +E GL+ D+ TY  +IH +CK  +++ A     
Sbjct: 524 ISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHN 583

Query: 433 GMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKE 492
            M++  F P   + + L++G C     +  LKL + +V +G  VDV  Y  LI+  CK  
Sbjct: 584 KMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVG 643

Query: 493 KVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYR 552
            VD A   F+ M+  G+  D+  Y  +  A   AG  +   ++L      +L  + K+ +
Sbjct: 644 DVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNML-----HKLADSGKLSQ 698

Query: 553 SFSASYAKDN 562
           SF+    K +
Sbjct: 699 SFACPLLKPS 708



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 97/415 (23%), Positives = 183/415 (44%), Gaps = 37/415 (8%)

Query: 75  KHSLQSHWTMIHILTKNKHFKSAQNMLEKIA----LRDFLSTPSVLNALVK--------- 121
           K +L +H  ++  L K    + A   LEKIA      D ++  ++++A  K         
Sbjct: 381 KPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFT 440

Query: 122 IHDDPDG-----NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLA 176
           + D+  G     ++  L+ ++     +K  +D  ++         +P   +   ++ +  
Sbjct: 441 LMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYF 500

Query: 177 KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLF 236
           K+   +   +++ +M++  ++ +I  YN LI   C+   + +    L E   K +  D  
Sbjct: 501 KEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDET 560

Query: 237 TYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD- 295
           TYN +I  YCK+G    A    ++M      PD+VT N+L++G C  G++ +A +LF   
Sbjct: 561 TYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESW 620

Query: 296 -IKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRI 354
             KG   + +TY TLI   C+  D++ AL   + M  KG+ P   TYN +L  L + GR 
Sbjct: 621 VEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRS 680

Query: 355 RDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD---------TASAMKVKNRMLEAGLM 405
            +A+ +L+++ +      +  C  L  +     D           S+ K ++  LE    
Sbjct: 681 EEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNALE---- 736

Query: 406 LDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEE 460
               TY   ++G C   ++  AK +L  M+  G      +Y  L++G   +   +
Sbjct: 737 ----TYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDCSTYITLMEGLIKRQKRQ 787



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/188 (22%), Positives = 77/188 (40%), Gaps = 3/188 (1%)

Query: 357 ANRLLNEMNEKK-IAPDNVTCNTLINAYCKIGDT--ASAMKVKNRMLEAGLMLDQFTYKA 413
           A +LL+ +  ++ + P     N +++A  +   T   +++ V   ++E  L  + +T+  
Sbjct: 154 AAQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNL 213

Query: 414 LIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
           L+H  C    +  A   L  M   G SP   +Y+ L++ +C K        LL      G
Sbjct: 214 LVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDG 273

Query: 474 LCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACS 533
           +      Y  L+  F +   +  A ++   M   G   D   Y  LA    +AG+     
Sbjct: 274 IAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAF 333

Query: 534 DILDDMYR 541
            + D+M R
Sbjct: 334 RLKDEMER 341


>gi|357473969|ref|XP_003607269.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           protein [Medicago truncatula]
 gi|355508324|gb|AES89466.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           protein [Medicago truncatula]
          Length = 970

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 145/460 (31%), Positives = 230/460 (50%), Gaps = 20/460 (4%)

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           LV+ +  ++   DG+ + ++M     +P   A + L++ L K    D  + +  K+ + G
Sbjct: 294 LVLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFG 353

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
            + N+ +YN LI+A CK  D+DK E L   M   ++  +  TY+ LI  +CK+GM   A 
Sbjct: 354 FLPNLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAE 413

Query: 256 AVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGY 313
           +   RM  +GI   I  YNSLI+G C+ G +  A  L+  +  +G  P   T+TTLI GY
Sbjct: 414 SYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGY 473

Query: 314 CRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDN 373
           C+   +E+A +L   M  K + P V T+ +++  LC    + +A++L +EM E+KI P  
Sbjct: 474 CKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTE 533

Query: 374 VTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFG 433
           VT N +I  YCK  +   A ++   ML  GL+ D +TY+ LI G C    +  AK+ +  
Sbjct: 534 VTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDD 593

Query: 434 MLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEK 493
           +       +   YS L+ GYC +      L    E + RG+ +D+  +  LI    K++ 
Sbjct: 594 LHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQD 653

Query: 494 VDYAQRLFNL---MQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKI 550
           +   +RLF L   M   G+  DSVIYTS+  AY + G  K   + LD M   +    +  
Sbjct: 654 M---KRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVT 710

Query: 551 YRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKEMQLRN 590
           Y +F     K  EI         DR   + H+F++M   N
Sbjct: 711 YTAFMNGLCKVGEI---------DR---AGHLFEKMLTAN 738



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 164/613 (26%), Positives = 271/613 (44%), Gaps = 51/613 (8%)

Query: 9   SDTKFIKTISAIMLKGH--WAKLLN-PNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFK 65
           +DT FI  IS I ++G+  W    N P+I+S+L    + +VL+N     H   L+  FF 
Sbjct: 29  NDTHFITHISDI-VRGNLSWKIAFNDPSISSTLKPHHVEQVLINTL---HDSKLALRFFN 84

Query: 66  WAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS-VLNALVKIHD 124
           +      N  H+  S   ++H L +NK F  A ++L  + LR   S P  V    ++ H 
Sbjct: 85  FL-GLHKNMNHTTTSFAILVHALVQNKLFWPANSLLHTLLLRG--SDPKFVFEKFLESHK 141

Query: 125 DPDGNSHV-LSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDM 183
               +S +   +LV  Y       D + V   M  + L+P +   + +LN L + R   +
Sbjct: 142 QCKFSSTLGFDFLVHSYLQNTRVFDAVVVLRLMLGNTLLPEVRTLSAILNGLLRIRKFIL 201

Query: 184 VWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIA 243
           VW+V+ + V  GV  + +  + +I + C+  D  + ++ +  ME       + TYN LI 
Sbjct: 202 VWEVFDESVNAGVKPDPYTCSAVIRSLCELKDFCRAKEKILWMESNRFDLSIVTYNVLIH 261

Query: 244 LYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR--------------------- 282
             CK G   EAL V+  +  +G+  D+VTY +L+ GFCR                     
Sbjct: 262 GLCKGGGVLEALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVP 321

Query: 283 --------------EGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLR 326
                         +G +  A  L   +   G  PN   Y  LI+  C+  DL++A  L 
Sbjct: 322 TEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLY 381

Query: 327 EVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKI 386
           + M +  +    VTY+ ++   CK G +  A      M E  I       N+LIN +CK 
Sbjct: 382 KNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKF 441

Query: 387 GDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSY 446
           GD ++A  +  +M+  GL     T+  LI G+CK  +++ A +L   M +   +PS  ++
Sbjct: 442 GDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTF 501

Query: 447 SWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQG 506
           + L+ G C+ N      KL DE V R +      Y  +I  +CK   +D A  L   M  
Sbjct: 502 TALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLH 561

Query: 507 NGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
           NG++ D+  Y  L       G   A  D +DD++++ L +    Y +    Y     + +
Sbjct: 562 NGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTE 621

Query: 567 LFWS--HVVDRGL 577
              +   ++ RG+
Sbjct: 622 ALSASCEMIQRGI 634



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 104/375 (27%), Positives = 186/375 (49%), Gaps = 2/375 (0%)

Query: 169 TVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEF 228
           ++L++S  K  + D+    + +M++ G+   I+ YN LI+  CK  D+   E L  +M  
Sbjct: 397 SILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMIN 456

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
           + +     T+ TLI+ YCK     +A  +   M  + I+P + T+ +LI+G C    M E
Sbjct: 457 EGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAE 516

Query: 289 ARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILR 346
           A +LF ++  +   P  VTY  +I+GYC+A+++++A  L E M   G+ P   TY  ++ 
Sbjct: 517 ASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLIS 576

Query: 347 KLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLML 406
            LC  GR+  A   ++++++K +  + +  + L++ YC  G    A+     M++ G+ +
Sbjct: 577 GLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINM 636

Query: 407 DQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLL 466
           D   +  LI G  K ++M     LL  M D G  P    Y+ ++D Y  + + +   + L
Sbjct: 637 DLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECL 696

Query: 467 DEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRA 526
           D  V+     +V  Y A +   CK  ++D A  LF  M    I  +SV Y     +  + 
Sbjct: 697 DLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKE 756

Query: 527 GEPKACSDILDDMYR 541
           G  K  +D+  +M +
Sbjct: 757 GNMKEATDLHHEMLK 771



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 107/425 (25%), Positives = 193/425 (45%), Gaps = 38/425 (8%)

Query: 122 IHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLT 181
           I++  +  +   + L+  Y      +   +++ +M    + P ++  T L+  L      
Sbjct: 455 INEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEM 514

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
               K++ +MV+  +      YNV+I   CK+ ++DK  +LL +M    +  D +TY  L
Sbjct: 515 AEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPL 574

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA------------ 289
           I+  C  G    A    D + ++ +  + + Y++L+HG+C +GR+ EA            
Sbjct: 575 ISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGI 634

Query: 290 --------------------RRLFRDIK-----GATPNHVTYTTLIDGYCRANDLEEALR 324
                               +RLF  +K     G  P+ V YT++ID Y +    +++  
Sbjct: 635 NMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGE 694

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
             ++M  +  +P VVTY + +  LCK G I  A  L  +M    I+P++VT    +++  
Sbjct: 695 CLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLT 754

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           K G+   A  + + ML+ GL+ +  TY  LI GFCK   +  A ++L  M + G  P   
Sbjct: 755 KEGNMKEATDLHHEMLK-GLLANTATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCI 813

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
           +YS ++  +C   +  A ++L D  + +G+  D   +  LI   C    +D A  L N M
Sbjct: 814 TYSTIIYEHCRSGDVGAAVELWDTMLRKGVEPDSVAFNLLIYGCCVNGALDKAFELRNDM 873

Query: 505 QGNGI 509
              G+
Sbjct: 874 LSRGL 878



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 94/322 (29%), Positives = 163/322 (50%), Gaps = 17/322 (5%)

Query: 176 AKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADL 235
            + RLT+ +     +M+Q G+  ++  + VLI    K  D+ ++  LL +M  + +R D 
Sbjct: 615 GQGRLTEAL-SASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDS 673

Query: 236 FTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD 295
             Y ++I  Y K+G   ++    D M  E   P++VTY + ++G C+ G +  A  LF  
Sbjct: 674 VIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEK 733

Query: 296 IKGA--TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGR 353
           +  A  +PN VTY   +D   +  +++EA  L   M  KG+     TYN ++R  CK GR
Sbjct: 734 MLTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEML-KGLLANTATYNILIRGFCKLGR 792

Query: 354 IRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKA 413
           + +A ++L+EM E  I PD +T +T+I  +C+ GD  +A+++ + ML  G+  D   +  
Sbjct: 793 LIEATKVLSEMTENGIFPDCITYSTIIYEHCRSGDVGAAVELWDTMLRKGVEPDSVAFNL 852

Query: 414 LIHGFCKAKEMDIAKELLFGMLDAGFSP-----------SYCSYSWLVDGYCNKNNEEAL 462
           LI+G C    +D A EL   ML  G  P             C++  L+ G C     +  
Sbjct: 853 LIYGCCVNGALDKAFELRNDMLSRGLKPRQILQLQKRDLGVCNF--LMHGGCVTGEVDTA 910

Query: 463 LKLLDEFVSRGLCVDVSVYRAL 484
           L+L    ++R + + + +++ L
Sbjct: 911 LRLYHSMLTRAVKLSLEMWKCL 932


>gi|410109869|gb|AFV61014.1| pentatricopeptide repeat-containing protein 11, partial
           [Acantholippia seriphioides]
          Length = 414

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 121/412 (29%), Positives = 218/412 (52%), Gaps = 3/412 (0%)

Query: 77  SLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS-VLNALVKIHDDPDGNSHVLSW 135
           +L S+ TMIH L  ++    A+++++ +  R    + S V  A+++       +  V S 
Sbjct: 1   TLHSYCTMIHFLCTHQMLSEAKSLIQFVVSRKGKGSASAVFAAILETKGTQRSDIXVFSG 60

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           L+  Y      +D ++ +   R H        C  +L  L K +   +VW  Y+++++ G
Sbjct: 61  LITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYQEILECG 120

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
             A+++ +N+L+H  CK  ++   + +   +    +R  + +YNTL++ Y + G   E  
Sbjct: 121 YPASLYFFNILMHRFCKEGNIRVAQSVFDAITKWGLRPSVVSYNTLMSGYIRLGDLDEGF 180

Query: 256 AVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGY 313
            ++  M   G+ PD+ TY+ LI+G C+E +M EA  LF +  + G  P  VT+TTLIDG+
Sbjct: 181 RLKSAMHASGVQPDVYTYSVLINGLCKEXKMDEANELFDEMLVXGLVPXGVTFTTLIDGH 240

Query: 314 CRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDN 373
           C+   ++ A+ + + M ++ + P ++TYN+++  LCK+G ++ A+ L+ EM+ K   PD 
Sbjct: 241 CKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGBLKQAHVLIXEMSLKGXKPDK 300

Query: 374 VTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFG 433
           +T  TLI+  CK GD  +A + + RM++  + LD   Y ALI G C+      A+++L  
Sbjct: 301 ITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 360

Query: 434 MLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
           ML  G  P   +Y+ +++ +C K +     KLL E    G    V  Y  L+
Sbjct: 361 MLSVGXKPDTRTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNVLM 412



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 92/279 (32%), Positives = 145/279 (51%), Gaps = 2/279 (0%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           G    +  +N L+H FC+EG +R A+ +F  I   G  P+ V+Y TL+ GY R  DL+E 
Sbjct: 120 GYPASLYFFNILMHRFCKEGNIRVAQSVFDAITKWGLRPSVVSYNTLMSGYIRLGDLDEG 179

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            RL+  M A GV P V TY+ ++  LCKE ++ +AN L +EM    + P  VT  TLI+ 
Sbjct: 180 FRLKSAMHASGVQPDVYTYSVLINGLCKEXKMDEANELFDEMLVXGLVPXGVTFTTLIDG 239

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +CK G    AM++  +ML   L+ D  TY  LI+G CK  ++  A  L+  M   G  P 
Sbjct: 240 HCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGBLKQAHVLIXEMSLKGXKPD 299

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ L+DG C + + +   +     +   + +D   Y ALI   C++ +   A+++  
Sbjct: 300 KITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLR 359

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
            M   G   D+  YT +   + + G+    S +L +M R
Sbjct: 360 EMLSVGXKPDTRTYTMIINEFCKKGDVWTGSKLLKEMQR 398



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 88/324 (27%), Positives = 145/324 (44%), Gaps = 40/324 (12%)

Query: 235 LFTYNTLIALYCKKGMHYEALA-VQDRMEREGISP-----------------DIVTYNSL 276
           L +Y T+I   C   M  EA + +Q  + R+G                    DI  ++ L
Sbjct: 2   LHSYCTMIHFLCTHQMLSEAKSLIQFVVSRKGKGSASAVFAAILETKGTQRSDIXVFSGL 61

Query: 277 IHGFCREGRMREA---RRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKG 333
           I  +   G +R+A    RL R+ K   P            CR   LE  ++L+      G
Sbjct: 62  ITAYLESGFLRDAIECYRLTREHKFWVPFDT---------CR-KVLEHLMKLKYFKLVWG 111

Query: 334 VYPGVVT---------YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
            Y  ++          +N ++ + CKEG IR A  + + + +  + P  V+ NTL++ Y 
Sbjct: 112 FYQEILECGYPASLYFFNILMHRFCKEGNIRVAQSVFDAITKWGLRPSVVSYNTLMSGYI 171

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           ++GD     ++K+ M  +G+  D +TY  LI+G CK  +MD A EL   ML  G  P   
Sbjct: 172 RLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKEXKMDEANELFDEMLVXGLVPXGV 231

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
           +++ L+DG+C     +  +++  + +S+ L  D+  Y  LI   CKK  +  A  L   M
Sbjct: 232 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGBLKQAHVLIXEM 291

Query: 505 QGNGILGDSVIYTSLAYAYWRAGE 528
              G   D + YT+L     + G+
Sbjct: 292 SLKGXKPDKITYTTLIDGCCKEGD 315



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 59/125 (47%)

Query: 155 QMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSS 214
           +M +    P     T L++   K+   D  ++  K+M+Q  +  +   Y  LI   C+  
Sbjct: 290 EMSLKGXKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEG 349

Query: 215 DVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYN 274
                EK+L EM     + D  TY  +I  +CKKG  +    +   M+R+G  P +VTYN
Sbjct: 350 RSVDAEKMLREMLSVGXKPDTRTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYN 409

Query: 275 SLIHG 279
            L++G
Sbjct: 410 VLMNG 414


>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 675

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 147/508 (28%), Positives = 249/508 (49%), Gaps = 18/508 (3%)

Query: 55  HIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS 114
           H P+++  FF+WAE     +K S  ++  ++ IL +N   +SA  ++EK           
Sbjct: 59  HRPAVALRFFRWAERQT-GFKRSELTYAVILDILARNGLMRSAYCVMEK----------- 106

Query: 115 VLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNS 174
           V++  ++          +L W+   YA   M +  L VF +M    ++P L  C  +L  
Sbjct: 107 VVSVKMENGVVDVLILDLLLWI---YAKKSMLEKCLLVFYKMVSKGMLPDLKNCNRVLRL 163

Query: 175 LA-KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
           L  +D   D+  +VY  MV+ G+   +  YN ++ + CK   V +  +LL +M+      
Sbjct: 164 LRDRDSSIDVAREVYNVMVECGIRPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLP 223

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           +  TYN L+      G   +A  +   M R G+     TY+ LI G+C +G++ EA RL 
Sbjct: 224 NDVTYNVLVNGLSHSGELEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLG 283

Query: 294 RDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
            ++  +GA P  VTY T++ G C+   + +A +L +VM  K + P +V+YN+++    + 
Sbjct: 284 EEMLSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRL 343

Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
           G I +A  L  E+  + + P  VT NTLI+  C++GD   AM++K+ M++ G   D FT+
Sbjct: 344 GNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTF 403

Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
             L+ GFCK   + +AKEL   ML+ G  P   +Y   + G     +      + +E ++
Sbjct: 404 TILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLA 463

Query: 472 RGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKA 531
           RG   D+  Y   I    K   +  A  L   M  NG++ D V YTS+ +A+  AG  + 
Sbjct: 464 RGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRK 523

Query: 532 CSDILDDMYRRRLMITLKIYRSFSASYA 559
              +  +M  + +  ++  Y     SYA
Sbjct: 524 ARAVFLEMLSKGIFPSVVTYTVLIHSYA 551



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 110/365 (30%), Positives = 172/365 (47%), Gaps = 2/365 (0%)

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
           D   ++ ++M+  G V  +  YN +++  CK   V    KLL  M  K++  DL +YNTL
Sbjct: 277 DEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTL 336

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGA 299
           I  Y + G   EA  +   +   G+ P +VTYN+LI G CR G +  A RL  ++   G 
Sbjct: 337 IYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGP 396

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
            P+  T+T L+ G+C+  +L  A  L + M  +G+ P    Y + +    K G    A  
Sbjct: 397 DPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFG 456

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
           +  EM  +   PD +T N  I+   K+G+   A ++  +ML  GL+ D  TY ++IH   
Sbjct: 457 MQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHL 516

Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
            A  +  A+ +   ML  G  PS  +Y+ L+  Y  +   +  +    E   +G+  +V 
Sbjct: 517 MAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVI 576

Query: 480 VYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
            Y ALI   CK  K+D A + F  MQ  GI  +   YT L       G  +    +  DM
Sbjct: 577 TYNALINGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDM 636

Query: 540 YRRRL 544
             R +
Sbjct: 637 LDREI 641



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 103/369 (27%), Positives = 178/369 (48%), Gaps = 4/369 (1%)

Query: 154 DQMRVHNLMPHLHACTVLLNSLAK-DRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCK 212
           ++M     +P L     ++  L K  R++D   K+   MV   ++ ++  YN LI+   +
Sbjct: 284 EEMLSRGAVPTLVTYNTIMYGLCKWGRVSD-ARKLLDVMVNKNLMPDLVSYNTLIYGYTR 342

Query: 213 SSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVT 272
             ++ +   L  E+ F+ +   + TYNTLI   C+ G    A+ ++D M + G  PD+ T
Sbjct: 343 LGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFT 402

Query: 273 YNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMA 330
           +  L+ GFC+ G +  A+ LF ++  +G  P+   Y T I G  +  D  +A  ++E M 
Sbjct: 403 FTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEML 462

Query: 331 AKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTA 390
           A+G  P ++TYN  +  L K G +++A+ L+ +M    + PD+VT  ++I+A+   G   
Sbjct: 463 ARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLR 522

Query: 391 SAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLV 450
            A  V   ML  G+     TY  LIH +     + +A    F M + G  P+  +Y+ L+
Sbjct: 523 KARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALI 582

Query: 451 DGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGIL 510
           +G C     +   K   E  ++G+  +   Y  LI   C       A RL+  M    I 
Sbjct: 583 NGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQ 642

Query: 511 GDSVIYTSL 519
            DS  +++L
Sbjct: 643 PDSCTHSAL 651



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 63/221 (28%), Positives = 103/221 (46%), Gaps = 5/221 (2%)

Query: 363 EMNEKKIAPDNVTCNTLINAYCKIGDTA--SAMKVKNRMLEAGLMLDQFTYKALIHGFCK 420
           +M  K + PD   CN ++    +  D++   A +V N M+E G+     TY  ++  FCK
Sbjct: 144 KMVSKGMLPDLKNCNRVLR-LLRDRDSSIDVAREVYNVMVECGIRPTVVTYNTMLDSFCK 202

Query: 421 AKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSV 480
             ++  A +LL  M   G  P+  +Y+ LV+G  +    E   +L+ E +  GL V    
Sbjct: 203 QGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLRLGLEVSAYT 262

Query: 481 YRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMY 540
           Y  LIR +C+K ++D A RL   M   G +   V Y ++ Y   + G       +LD M 
Sbjct: 263 YDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMV 322

Query: 541 RRRLMITLKIYRSFSASYAKDNEILDLF--WSHVVDRGLMS 579
            + LM  L  Y +    Y +   I + F  ++ +  RGL+ 
Sbjct: 323 NKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVP 363


>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
 gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
          Length = 471

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 122/382 (31%), Positives = 207/382 (54%), Gaps = 3/382 (0%)

Query: 127 DGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWK 186
           D N    + L+  +A  K  ++ +++ ++MR     P+L    VL+++L K  +      
Sbjct: 54  DPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQD 113

Query: 187 VYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYC 246
           V KKM++ G   N+  +N L+   CK  +VD   KLL  M  K +R ++ TY+ LI   C
Sbjct: 114 VVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLC 173

Query: 247 KKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGA--TPNHV 304
           K     EA  V + M+  G++PD  TY++LIHG C+  ++ EA ++ R + G+  TP+ V
Sbjct: 174 KSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVV 233

Query: 305 TYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM 364
            Y+++I  +C++  L EA +  + M  +   P VVTYN+++  LCK G+I +A  +L++M
Sbjct: 234 VYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQM 293

Query: 365 NEK-KIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
            E   + PD VT +T+IN  CK      A K+ +RM +AG   D  TY  +I G CK   
Sbjct: 294 QESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGR 353

Query: 424 MDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRA 483
           ++ A+ LL GM  AG +P+  +Y+ L+ G C     +   ++++E  + G   ++  Y  
Sbjct: 354 LEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNT 413

Query: 484 LIRRFCKKEKVDYAQRLFNLMQ 505
           ++   C   ++  AQ+L   M+
Sbjct: 414 MVNGLCVSGRIKEAQQLVQRMK 435



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 133/421 (31%), Positives = 222/421 (52%), Gaps = 8/421 (1%)

Query: 126 PDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVW 185
           PD  +H  + ++   AN     DG    D +R     P++   T L+ + A+ +  +   
Sbjct: 23  PDAFTH--TPIITAMANAG-DLDG--AMDHLRSMGCDPNVVTYTALIAAFARAKKLEEAM 77

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
           K+ ++M + G   N+  YNVL+ A CK S V   + ++ +M       ++ T+N+L+  +
Sbjct: 78  KLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGF 137

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNH 303
           CK+G   +A  +   M  +G+ P++VTY++LI G C+  +  EA+ +  ++K  G TP+ 
Sbjct: 138 CKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDA 197

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
            TY+ LI G C+A+ +EEA ++   MA  G  P VV Y+SI+   CK G++ +A + L E
Sbjct: 198 FTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQE 257

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLML-DQFTYKALIHGFCKAK 422
           M +++ +PD VT NT+I+  CK+G  A A  + ++M E+G +L D  TY  +I+G CK+ 
Sbjct: 258 MRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSD 317

Query: 423 EMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYR 482
            +  A++LL  M  AG +P   +Y+ ++DG C     E    LL      G   +V  Y 
Sbjct: 318 MLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYT 377

Query: 483 ALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRR 542
            LI   CK  KVD A+R+   M+  G   + V Y ++      +G  K    ++  M   
Sbjct: 378 TLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDG 437

Query: 543 R 543
           R
Sbjct: 438 R 438



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 101/312 (32%), Positives = 158/312 (50%), Gaps = 6/312 (1%)

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           C + D+    +LL EM+      D FT+  +I      G    A+   D +   G  P++
Sbjct: 1   CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAM---DHLRSMGCDPNV 57

Query: 271 VTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREV 328
           VTY +LI  F R  ++ EA +L  +++  G  PN VTY  L+D  C+ + +  A  + + 
Sbjct: 58  VTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKK 117

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M   G  P V+T+NS++   CK G + DA +LL  M  K + P+ VT + LI+  CK   
Sbjct: 118 MIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQK 177

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
              A +V   M  +G+  D FTY ALIHG CKA +++ A+++L  M  +G +P    YS 
Sbjct: 178 FLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSS 237

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG 508
           ++  +C         K L E   +    DV  Y  +I   CK  K+  AQ + + MQ +G
Sbjct: 238 IIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESG 297

Query: 509 -ILGDSVIYTSL 519
            +L D V Y+++
Sbjct: 298 DVLPDVVTYSTV 309



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 102/383 (26%), Positives = 182/383 (47%), Gaps = 6/383 (1%)

Query: 185 WKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIAL 244
            ++ ++M   G   +   +  +I A   + D+D     L  M       ++ TY  LIA 
Sbjct: 10  LELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNVVTYTALIAA 66

Query: 245 YCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPN 302
           + +     EA+ + + M   G  P++VTYN L+   C+   +  A+ + + +   G  PN
Sbjct: 67  FARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPN 126

Query: 303 HVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLN 362
            +T+ +L+DG+C+  ++++A +L  +M AKG+ P VVTY++++  LCK  +  +A  +L 
Sbjct: 127 VMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLE 186

Query: 363 EMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAK 422
           EM    + PD  T + LI+  CK      A ++  RM  +G   D   Y ++IH FCK+ 
Sbjct: 187 EMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSG 246

Query: 423 EMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG-LCVDVSVY 481
           ++  A++ L  M     SP   +Y+ ++DG C          +LD+    G +  DV  Y
Sbjct: 247 KLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTY 306

Query: 482 RALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
             +I   CK + +  AQ+L + M   G   D V YT++     + G  +    +L  M R
Sbjct: 307 STVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKR 366

Query: 542 RRLMITLKIYRSFSASYAKDNEI 564
                 +  Y +  +   K  ++
Sbjct: 367 AGCAPNVVTYTTLISGLCKARKV 389



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 98/294 (33%), Positives = 149/294 (50%), Gaps = 1/294 (0%)

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGATPNHVT 305
           C  G  + AL + + M+  G +PD  T+  +I      G +  A    R + G  PN VT
Sbjct: 1   CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM-GCDPNVVT 59

Query: 306 YTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMN 365
           YT LI  + RA  LEEA++L E M  +G  P +VTYN ++  LCK   +  A  ++ +M 
Sbjct: 60  YTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMI 119

Query: 366 EKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMD 425
           E   AP+ +T N+L++ +CK G+   A K+   M+  G+  +  TY ALI G CK+++  
Sbjct: 120 EGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFL 179

Query: 426 IAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
            AKE+L  M  +G +P   +YS L+ G C  +  E   ++L      G   DV VY ++I
Sbjct: 180 EAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSII 239

Query: 486 RRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
             FCK  K+  AQ+    M+      D V Y ++     + G+      ILD M
Sbjct: 240 HAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQM 293



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 84/266 (31%), Positives = 143/266 (53%), Gaps = 7/266 (2%)

Query: 281 CREGRMREARRLFRDIKGA--TPNHVTYTTLIDGYCRANDLEEAL-RLREVMAAKGVYPG 337
           C  G +  A  L  ++K A   P+  T+T +I     A DL+ A+  LR +    G  P 
Sbjct: 1   CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM----GCDPN 56

Query: 338 VVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKN 397
           VVTY +++    +  ++ +A +LL EM E+   P+ VT N L++A CK+    +A  V  
Sbjct: 57  VVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVK 116

Query: 398 RMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKN 457
           +M+E G   +  T+ +L+ GFCK   +D A++LL  M+  G  P+  +YS L+DG C   
Sbjct: 117 KMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQ 176

Query: 458 NEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYT 517
                 ++L+E  + G+  D   Y ALI   CK +K++ A+++   M G+G   D V+Y+
Sbjct: 177 KFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYS 236

Query: 518 SLAYAYWRAGEPKACSDILDDMYRRR 543
           S+ +A+ ++G+       L +M ++R
Sbjct: 237 SIIHAFCKSGKLLEAQKTLQEMRKQR 262



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 71/253 (28%), Positives = 122/253 (48%), Gaps = 3/253 (1%)

Query: 314 CRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDN 373
           C A DL  AL L E M + G  P   T+  I+  +   G +  A   L  M      P+ 
Sbjct: 1   CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMG---CDPNV 57

Query: 374 VTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFG 433
           VT   LI A+ +      AMK+   M E G   +  TY  L+   CK   +  A++++  
Sbjct: 58  VTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKK 117

Query: 434 MLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEK 493
           M++ GF+P+  +++ LVDG+C + N +   KLL   V++G+  +V  Y ALI   CK +K
Sbjct: 118 MIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQK 177

Query: 494 VDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRS 553
              A+ +   M+ +G+  D+  Y++L +   +A + +    +L  M        + +Y S
Sbjct: 178 FLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSS 237

Query: 554 FSASYAKDNEILD 566
              ++ K  ++L+
Sbjct: 238 IIHAFCKSGKLLE 250


>gi|255660814|gb|ACU25576.1| pentatricopeptide repeat-containing protein [Junellia spathulata]
          Length = 418

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 116/404 (28%), Positives = 218/404 (53%), Gaps = 3/404 (0%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS-VLNALVKIHDDPDGNSH 131
            ++H+LQS+ TMIH L  ++    A+ +++ +  R    + S V  A+++       + +
Sbjct: 8   TFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKDSASAVFAAILETRGTQRSDIY 67

Query: 132 VLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKM 191
           V S L+  Y      +D ++     + H        C  +L  L K +   +VW  Y++ 
Sbjct: 68  VFSGLITAYLESGFLRDAIECXRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEES 127

Query: 192 VQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMH 251
           ++ G  A+++ +N+L+H+ CK  ++   + +   +    +R  + ++NTL+  Y K G  
Sbjct: 128 LECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDL 187

Query: 252 YEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTL 309
            E   +++ M+  G+ PD+ TY+ LI+G C+E +M +A  LF ++   G  PN VT+TTL
Sbjct: 188 NEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTL 247

Query: 310 IDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI 369
           IDG+C+   ++ A+ + + M ++ + P ++TYN+++  LCK+G ++ A  L++EM+ K +
Sbjct: 248 IDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGL 307

Query: 370 APDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKE 429
            PD +T  TLI+  CK GD  +A + +  M++  + LD   Y ALI G C+      A++
Sbjct: 308 KPDKITYTTLIDGSCKEGDLETAFEYRKIMIKENIRLDDVAYTALISGLCQEGRSVDAEK 367

Query: 430 LLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
           +L  ML  G      +Y+ +++ +C K +     KL+ E    G
Sbjct: 368 MLREMLSVGLKLEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDG 411



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 90/279 (32%), Positives = 148/279 (53%), Gaps = 2/279 (0%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           G    +  +N L+H FC+EG +R A+ +F  I   G  P+ V++ TL++GY +  DL E 
Sbjct: 131 GYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEG 190

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            RL+  M A GV P V TY+ ++  LCKE ++ DAN L +EM +  + P+ VT  TLI+ 
Sbjct: 191 FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDG 250

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +CK G    AM++  +ML   L  D  TY  LI+G CK  ++  A++L+  M   G  P 
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPD 310

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ L+DG C + + E   +     +   + +D   Y ALI   C++ +   A+++  
Sbjct: 311 KITYTTLIDGSCKEGDLETAFEYRKIMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLR 370

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
            M   G+  +   YT +   + + G+    S ++ +M R
Sbjct: 371 EMLSVGLKLEIGTYTMIINEFCKKGDVWTGSKLMKEMQR 409



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 93/327 (28%), Positives = 148/327 (45%), Gaps = 40/327 (12%)

Query: 232 RADLFTYNTLIALYCKKGMHYEALA-VQDRMEREGISP-----------------DIVTY 273
           R  L +Y T+I   C   M  EA   +Q  + R+G                    DI  +
Sbjct: 10  RHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKDSASAVFAAILETRGTQRSDIYVF 69

Query: 274 NSLIHGFCREGRMREA---RRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMA 330
           + LI  +   G +R+A    RL ++ K   P            CR   LE  ++L+    
Sbjct: 70  SGLITAYLESGFLRDAIECXRLTKEHKFRVPFDT---------CRKV-LEHLMKLKYFKL 119

Query: 331 AKGVY---------PGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
             G Y           +  +N ++   CKEG IR A  + + + +  + P  V+ NTL+N
Sbjct: 120 VWGFYEESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMN 179

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
            Y K+GD     ++KN M  +G+  D +TY  LI+G CK  +MD A EL   MLD G  P
Sbjct: 180 GYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVP 239

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
           +  +++ L+DG+C     +  +++  + +S+ L  D+  Y  LI   CKK  +  AQ L 
Sbjct: 240 NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLI 299

Query: 502 NLMQGNGILGDSVIYTSLAYAYWRAGE 528
           + M   G+  D + YT+L     + G+
Sbjct: 300 DEMSMKGLKPDKITYTTLIDGSCKEGD 326



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 89/316 (28%), Positives = 149/316 (47%), Gaps = 27/316 (8%)

Query: 66  WAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKI---ALRDFLSTPSVLNALVKI 122
           + ES    Y  SL     ++H   K    + AQ++ + I    LR     PSV++     
Sbjct: 124 YEESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLR-----PSVVS----- 173

Query: 123 HDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTD 182
                      + L+  Y  L    +G ++ + M+   + P ++  +VL+N L K+   D
Sbjct: 174 ----------FNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMD 223

Query: 183 MVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLI 242
              +++ +M+  G+V N   +  LI   CK+  VD   ++  +M  + +  DL TYNTLI
Sbjct: 224 DANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLI 283

Query: 243 ALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI---KGA 299
              CKKG   +A  + D M  +G+ PD +TY +LI G C+EG +  A   +R I   +  
Sbjct: 284 YGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFE-YRKIMIKENI 342

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
             + V YT LI G C+     +A ++   M + G+   + TY  I+ + CK+G +   ++
Sbjct: 343 RLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKLEIGTYTMIINEFCKKGDVWTGSK 402

Query: 360 LLNEMNEKKIAPDNVT 375
           L+ EM      P  VT
Sbjct: 403 LMKEMQRDGYVPSVVT 418


>gi|255660840|gb|ACU25589.1| pentatricopeptide repeat-containing protein [Pitraea cuneato-ovata]
          Length = 418

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 120/404 (29%), Positives = 215/404 (53%), Gaps = 3/404 (0%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS-VLNALVKIHDDPDGNSH 131
            ++H+L S+ TMIH L  ++    A+++++ +  R    + S V   +++       + +
Sbjct: 8   TFRHTLHSYCTMIHFLCTHQMLPEAKSLIQIVVSRKGKDSASAVFATILETKGAQRSDIY 67

Query: 132 VLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKM 191
           V S L+  Y      +D ++ F   R +        C  +L  L K +   +VW  YK++
Sbjct: 68  VFSGLITAYLESGFLRDAIECFRLTRENKYWVPFDTCRKVLEHLMKLKYFKLVWSFYKEI 127

Query: 192 VQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMH 251
           ++    A+++ +N+L+   CK  ++   + +   +    +R  + ++NTL+  Y K G  
Sbjct: 128 LECRYPASLYFFNILMDRFCKEGEIRLAQSVFDGITKWGLRPSVVSFNTLMNGYIKLGDL 187

Query: 252 YEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTL 309
            E   ++  M   G+ PD+ TY+ LI+G C+E +M EA +LF ++  +G  PN VT+TTL
Sbjct: 188 DEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEAHKLFDEMLDRGLVPNGVTFTTL 247

Query: 310 IDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI 369
           IDG+C+   L+ A+ + + M ++G  P  +TYN+++  LCK+G +  A  L +EM+ K +
Sbjct: 248 IDGHCKNGKLDLAMEIYKQMLSQGFSPDXITYNTLIYGLCKKGDLXQAKDLXDEMSMKGL 307

Query: 370 APDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKE 429
            PD +T  TLI+  CK GD  +A + + RM++  + LD  +Y ALI G CK      A++
Sbjct: 308 KPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVSYTALISGLCKEGRSVDAEK 367

Query: 430 LLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
           +L  ML  G  P   +Y+ ++  +C   + +   KLL E    G
Sbjct: 368 MLREMLSVGLKPDTGTYTIVMHEFCKNGDVKMGSKLLKEMQRDG 411



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 91/271 (33%), Positives = 150/271 (55%), Gaps = 2/271 (0%)

Query: 273 YNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMA 330
           +N L+  FC+EG +R A+ +F  I   G  P+ V++ TL++GY +  DL+E  RL+  M 
Sbjct: 139 FNILMDRFCKEGEIRLAQSVFDGITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKSAMH 198

Query: 331 AKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTA 390
           A GV P V TY+ ++  LCKE ++ +A++L +EM ++ + P+ VT  TLI+ +CK G   
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDEAHKLFDEMLDRGLVPNGVTFTTLIDGHCKNGKLD 258

Query: 391 SAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLV 450
            AM++  +ML  G   D  TY  LI+G CK  ++  AK+L   M   G  P   +Y+ L+
Sbjct: 259 LAMEIYKQMLSQGFSPDXITYNTLIYGLCKKGDLXQAKDLXDEMSMKGLKPDKITYTTLI 318

Query: 451 DGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGIL 510
           DG C + + E   +     +   + +D   Y ALI   CK+ +   A+++   M   G+ 
Sbjct: 319 DGSCKEGDLETAFEYRKRMIKENIRLDDVSYTALISGLCKEGRSVDAEKMLREMLSVGLK 378

Query: 511 GDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
            D+  YT + + + + G+ K  S +L +M R
Sbjct: 379 PDTGTYTIVMHEFCKNGDVKMGSKLLKEMQR 409



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 94/343 (27%), Positives = 161/343 (46%), Gaps = 43/343 (12%)

Query: 232 RADLFTYNTLIALYCKKGMHYEALA-VQDRMEREGISP-----------------DIVTY 273
           R  L +Y T+I   C   M  EA + +Q  + R+G                    DI  +
Sbjct: 10  RHTLHSYCTMIHFLCTHQMLPEAKSLIQIVVSRKGKDSASAVFATILETKGAQRSDIYVF 69

Query: 274 NSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLR------- 326
           + LI  +   G +R+A   FR +       V + T     CR   LE  ++L+       
Sbjct: 70  SGLITAYLESGFLRDAIECFR-LTRENKYWVPFDT-----CRKV-LEHLMKLKYFKLVWS 122

Query: 327 ---EVMAAKGVYPG-VVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
              E++  +  YP  +  +N ++ + CKEG IR A  + + + +  + P  V+ NTL+N 
Sbjct: 123 FYKEILECR--YPASLYFFNILMDRFCKEGEIRLAQSVFDGITKWGLRPSVVSFNTLMNG 180

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           Y K+GD     ++K+ M  +G+  D +TY  LI+G CK  +MD A +L   MLD G  P+
Sbjct: 181 YIKLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEAHKLFDEMLDRGLVPN 240

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +++ L+DG+C     +  +++  + +S+G   D   Y  LI   CKK  +  A+ L +
Sbjct: 241 GVTFTTLIDGHCKNGKLDLAMEIYKQMLSQGFSPDXITYNTLIYGLCKKGDLXQAKDLXD 300

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
            M   G+  D + YT+L     + G+ +   +     YR+R++
Sbjct: 301 EMSMKGLKPDKITYTTLIDGSCKEGDLETAFE-----YRKRMI 338



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 71/240 (29%), Positives = 120/240 (50%), Gaps = 6/240 (2%)

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
           Y  L    +G ++   M    + P ++  +VL+N L K+   D   K++ +M+  G+V N
Sbjct: 181 YIKLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEAHKLFDEMLDRGLVPN 240

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
              +  LI   CK+  +D   ++  +M  +    D  TYNTLI   CKKG   +A  + D
Sbjct: 241 GVTFTTLIDGHCKNGKLDLAMEIYKQMLSQGFSPDXITYNTLIYGLCKKGDLXQAKDLXD 300

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREA----RRLFRDIKGATPNHVTYTTLIDGYCR 315
            M  +G+ PD +TY +LI G C+EG +  A    +R+ ++      + V+YT LI G C+
Sbjct: 301 EMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKE--NIRLDDVSYTALISGLCK 358

Query: 316 ANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVT 375
                +A ++   M + G+ P   TY  ++ + CK G ++  ++LL EM      P  +T
Sbjct: 359 EGRSVDAEKMLREMLSVGLKPDTGTYTIVMHEFCKNGDVKMGSKLLKEMQRDGHVPCVIT 418



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 78/282 (27%), Positives = 126/282 (44%), Gaps = 12/282 (4%)

Query: 306 YTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMN 365
           +  L+D +C+  ++  A  + + +   G+ P VV++N+++    K G + +  RL + M+
Sbjct: 139 FNILMDRFCKEGEIRLAQSVFDGITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKSAMH 198

Query: 366 EKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMD 425
              + PD  T + LIN  CK      A K+ + ML+ GL+ +  T+  LI G CK  ++D
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDEAHKLFDEMLDRGLVPNGVTFTTLIDGHCKNGKLD 258

Query: 426 IAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
           +A E+   ML  GFSP   +Y+ L+ G C K +      L DE   +GL  D   Y  LI
Sbjct: 259 LAMEIYKQMLSQGFSPDXITYNTLIYGLCKKGDLXQAKDLXDEMSMKGLKPDKITYTTLI 318

Query: 486 RRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
              CK+  ++ A      M    I  D V YT+L     + G       +L +M    L 
Sbjct: 319 DGSCKEGDLETAFEYRKRMIKENIRLDDVSYTALISGLCKEGRSVDAEKMLREMLSVGLK 378

Query: 546 ITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKEMQ 587
                Y      + K+ ++             M   + KEMQ
Sbjct: 379 PDTGTYTIVMHEFCKNGDV------------KMGSKLLKEMQ 408


>gi|255560884|ref|XP_002521455.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539354|gb|EEF40945.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 623

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 146/521 (28%), Positives = 247/521 (47%), Gaps = 10/521 (1%)

Query: 38  LTSTAIHKVLLNLYNCCHIPSLSC-AFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKS 96
           L +  I +VLL     C   S+S   FF W ++ +   + S+Q++  ++HIL  +K FK 
Sbjct: 89  LGTDEISRVLLR----CQSDSISALTFFSWVKNDL-GLQPSIQNYCFLVHILAWSKEFKE 143

Query: 97  AQNMLEKIA--LRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFD 154
           A   L ++   ++D      V   L+    D + +  +   LV  Y    M ++G   F 
Sbjct: 144 AMKFLTELIKLVKDCSFNEDVFQTLLFCCQDCNWDPVIFDMLVKAYVREGMIKEGFTTFR 203

Query: 155 QMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSS 214
           ++     +P + +C  LLN L K    D  W+VYK+M ++G+  N + +N+L H  C+  
Sbjct: 204 KIVEVGCVPSVISCNCLLNGLLKLNRIDQCWQVYKEMARVGIHPNSYTFNILTHVFCQDG 263

Query: 215 DVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYN 274
           DVDKV   L  ME +    D+ TYNTLI+ YC+KG   +A  +   M R  + PD+V+Y 
Sbjct: 264 DVDKVNDFLERMEEEGFEPDIVTYNTLISCYCRKGRLDDAFYLYRIMYRRNVLPDLVSYT 323

Query: 275 SLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAK 332
           +L++G C+EG++REA +LF  +  +G  P+ V++ TLI GYC+   + E+  L   M   
Sbjct: 324 ALMNGLCKEGKVREAHQLFHRMIHRGLNPDIVSFNTLICGYCKEGKMRESRSLLHEMIGS 383

Query: 333 GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
           G+ P  VT   ++    KE RI  A  L+ E+    +       + L+ + C+ G   +A
Sbjct: 384 GICPDKVTCQVLIEGYRKEARIVSALNLVVELERFGVPISTDIYDYLMVSICEEGRPFAA 443

Query: 393 MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
             +  R+ + G +     Y  LI   CK+  +  A  +   M      PS  +Y  L+  
Sbjct: 444 KSLLQRISQRGYVPGVEIYNKLIESLCKSDSIADALLVKSEMGHRNIKPSAITYKALICC 503

Query: 453 YCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGD 512
            C  +       L++E +  G+  D  + RAL+  +CK+  +  A+ L         + D
Sbjct: 504 LCRTSRSMEAESLMEEMLQSGMLPDPDICRALMHVYCKERDIGKAETLLQTFAKEFQIFD 563

Query: 513 SVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRS 553
           S  Y +L   Y    +     ++ D M +      ++ +R 
Sbjct: 564 SESYNTLVKTYCEDADATRLMELQDRMLKVGFAPNIQTFRQ 604



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 107/415 (25%), Positives = 190/415 (45%), Gaps = 25/415 (6%)

Query: 158 VHNLMPHLHACTV--LLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSD 215
           V +L+PHL    +  +L     D ++ + +  + K   LG+  +I  Y  L+H    S +
Sbjct: 82  VKHLLPHLGTDEISRVLLRCQSDSISALTFFSWVKN-DLGLQPSIQNYCFLVHILAWSKE 140

Query: 216 VDKVEKLLCEM--EFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTY 273
             +  K L E+    KD   +   + TL  L+C +  ++                D V +
Sbjct: 141 FKEAMKFLTELIKLVKDCSFNEDVFQTL--LFCCQDCNW----------------DPVIF 182

Query: 274 NSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAA 331
           + L+  + REG ++E    FR I   G  P+ ++   L++G  + N +++  ++ + MA 
Sbjct: 183 DMLVKAYVREGMIKEGFTTFRKIVEVGCVPSVISCNCLLNGLLKLNRIDQCWQVYKEMAR 242

Query: 332 KGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTAS 391
            G++P   T+N +    C++G +   N  L  M E+   PD VT NTLI+ YC+ G    
Sbjct: 243 VGIHPNSYTFNILTHVFCQDGDVDKVNDFLERMEEEGFEPDIVTYNTLISCYCRKGRLDD 302

Query: 392 AMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVD 451
           A  +   M    ++ D  +Y AL++G CK  ++  A +L   M+  G +P   S++ L+ 
Sbjct: 303 AFYLYRIMYRRNVLPDLVSYTALMNGLCKEGKVREAHQLFHRMIHRGLNPDIVSFNTLIC 362

Query: 452 GYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILG 511
           GYC +        LL E +  G+C D    + LI  + K+ ++  A  L   ++  G+  
Sbjct: 363 GYCKEGKMRESRSLLHEMIGSGICPDKVTCQVLIEGYRKEARIVSALNLVVELERFGVPI 422

Query: 512 DSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
            + IY  L  +    G P A   +L  + +R  +  ++IY     S  K + I D
Sbjct: 423 STDIYDYLMVSICEEGRPFAAKSLLQRISQRGYVPGVEIYNKLIESLCKSDSIAD 477



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 86/333 (25%), Positives = 146/333 (43%), Gaps = 37/333 (11%)

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           L+  Y       D   ++  M   N++P L + T L+N L K+       +++ +M+  G
Sbjct: 290 LISCYCRKGRLDDAFYLYRIMYRRNVLPDLVSYTALMNGLCKEGKVREAHQLFHRMIHRG 349

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
           +  +I  +N LI   CK   + +   LL EM    +  D  T   LI  Y K+     AL
Sbjct: 350 LNPDIVSFNTLICGYCKEGKMRESRSLLHEMIGSGICPDKVTCQVLIEGYRKEARIVSAL 409

Query: 256 AVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGY 313
            +   +ER G+      Y+ L+   C EGR   A+ L + I  +G  P    Y  LI+  
Sbjct: 410 NLVVELERFGVPISTDIYDYLMVSICEEGRPFAAKSLLQRISQRGYVPGVEIYNKLIESL 469

Query: 314 CRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDN 373
           C+++ + +AL ++  M  + + P  +TY +++  LC+  R  +A  L+ EM +  + PD 
Sbjct: 470 CKSDSIADALLVKSEMGHRNIKPSAITYKALICCLCRTSRSMEAESLMEEMLQSGMLPDP 529

Query: 374 VTC-----------------------------------NTLINAYCKIGDTASAMKVKNR 398
             C                                   NTL+  YC+  D    M++++R
Sbjct: 530 DICRALMHVYCKERDIGKAETLLQTFAKEFQIFDSESYNTLVKTYCEDADATRLMELQDR 589

Query: 399 MLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
           ML+ G   +  T++ +IHG  KA  ++  K LL
Sbjct: 590 MLKVGFAPNIQTFRQMIHGLWKAMAVEKDKLLL 622


>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
 gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
          Length = 603

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 141/464 (30%), Positives = 223/464 (48%), Gaps = 23/464 (4%)

Query: 77  SLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWL 136
           S  ++ ++IH L     F  A+ +   +  R    +P   N                   
Sbjct: 44  STVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYN------------------- 84

Query: 137 VIFYANLK--MTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQL 194
           VI  A+ K  M ++   +  +M     +P +     +++ L K    +    ++ +M +L
Sbjct: 85  VIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEALLLFNEMERL 144

Query: 195 GVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEA 254
           G   N   +N +I   C+ S +D+  ++  EME +D+  D ++Y  LI    K G   EA
Sbjct: 145 GCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEA 204

Query: 255 LAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDG 312
             +  RM   GI+P  VTYN +IHG C    + EA  LF+ +  KG  P+  T+  LID 
Sbjct: 205 YKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDA 264

Query: 313 YCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPD 372
           +C+   ++EA RL + M   G  P VVTY++++  LC   R+ DA  LL +M +++  P 
Sbjct: 265 HCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPT 324

Query: 373 NVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLF 432
            VT NTLI+  CK G    A +V + M+ +G   D  TY  L+HG C+A + + A+ELL 
Sbjct: 325 VVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLS 384

Query: 433 GMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKE 492
            M+  G +P+  +Y+ LV G C  N       +  +  S G   ++  Y ALI  FC   
Sbjct: 385 DMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAG 444

Query: 493 KVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDIL 536
           +VD   +LF  M   GI  D V+Y +LA    ++G      +IL
Sbjct: 445 QVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEIL 488



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 141/485 (29%), Positives = 224/485 (46%), Gaps = 19/485 (3%)

Query: 80  SHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIF 139
           S+  +I  L K      A+++ +K+       TPS +     IH     NS         
Sbjct: 12  SYGILIDGLAKAGKLNDARDLFQKLLHSGV--TPSTVAYTSLIHGLCMANSF-------- 61

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
                   D  ++F  M      P      V++++  K  + +    + KKM++ G V +
Sbjct: 62  -------DDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPD 114

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
           +  YN ++   CKS  V++   L  EME      +  ++NT+I   C++    +A  V  
Sbjct: 115 VVTYNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFH 174

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRAN 317
            ME   I PD  +Y  LI G  + G++ EA +LFR +   G TP+ VTY  +I G C A 
Sbjct: 175 EMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAY 234

Query: 318 DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCN 377
            L+EAL L + M +KG  P   T+N ++   CK G++ +A RLL  M +    PD VT +
Sbjct: 235 TLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYS 294

Query: 378 TLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA 437
           TLI+  C I     A  +   M++        T   LIHG CKA  +  A+E+L  M+ +
Sbjct: 295 TLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSS 354

Query: 438 GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYA 497
           G SP   +Y+ LV G+C     E   +LL + V+RGL  +V  Y AL+   CK  ++  A
Sbjct: 355 GQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEA 414

Query: 498 QRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSAS 557
             +F  M+ +G   +   YT+L   +  AG+      +  +M    +     +Y + +A 
Sbjct: 415 CGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAE 474

Query: 558 YAKDN 562
             K  
Sbjct: 475 LCKSG 479



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 120/411 (29%), Positives = 202/411 (49%), Gaps = 2/411 (0%)

Query: 156 MRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSD 215
           M   N+ P   +  +L++ LAK    +    +++K++  GV  +   Y  LIH  C ++ 
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 216 VDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNS 275
            D   +L  +M  +       TYN +I   CK+GM  EA  +  +M  +G  PD+VTYN+
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 276 LIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKG 333
           ++ G C+ GR+ EA  LF +++  G TPN  ++ T+I G C+ + +++A ++   M A+ 
Sbjct: 121 VMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARD 180

Query: 334 VYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAM 393
           + P   +Y  ++  L K G++ +A +L   M +  I P  VT N +I+  C       A+
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240

Query: 394 KVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGY 453
           ++   M   G    +FT+  LI   CK  +MD A  LL  M D G  P   +YS L+ G 
Sbjct: 241 ELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGL 300

Query: 454 CNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDS 513
           C+    +    LL++ V R     V     LI   CK  ++  A+ + + M  +G   D 
Sbjct: 301 CSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDV 360

Query: 514 VIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
           V Y +L + + RAG+ +   ++L DM  R L   +  Y +  +   K N +
Sbjct: 361 VTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRL 411



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 126/429 (29%), Positives = 206/429 (48%), Gaps = 6/429 (1%)

Query: 115 VLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNS 174
           + N + ++   P+  SH  + +++            QVF +M   ++ P   +  +L++ 
Sbjct: 137 LFNEMERLGCTPNRRSH--NTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDG 194

Query: 175 LAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRAD 234
           LAK    +  +K++++M+  G+  +   YNV+IH  C +  +D+  +L   M  K  R  
Sbjct: 195 LAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPS 254

Query: 235 LFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR 294
            FT+N LI  +CK+G   EA  +  RM  +G  PD+VTY++LI G C   R+ +AR L  
Sbjct: 255 RFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLE 314

Query: 295 DI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEG 352
           D+  +   P  VT  TLI G C+A  ++EA  + + M + G  P VVTYN+++   C+ G
Sbjct: 315 DMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAG 374

Query: 353 RIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYK 412
           +   A  LL++M  + +AP+ VT   L++  CK      A  V  +M  +G   + FTY 
Sbjct: 375 QTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYT 434

Query: 413 ALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS- 471
           ALI GFC A ++D   +L   M+ AG SP +  Y  L    C        L++L E    
Sbjct: 435 ALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRES 494

Query: 472 -RGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPK 530
            R       VYR  +       K++ A      M   G L       SL     ++G+  
Sbjct: 495 LRSEAWGDEVYRFAVDGLLDAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGG 554

Query: 531 ACSDILDDM 539
               +L+++
Sbjct: 555 EARAVLEEI 563



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 120/464 (25%), Positives = 184/464 (39%), Gaps = 72/464 (15%)

Query: 79  QSHWTMIHILTKNKHFKSAQNMLEKIALRDF-------------LSTPSVLNALVKIH-- 123
           +SH T+I  L +      A  +  ++  RD              L+    LN   K+   
Sbjct: 151 RSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRR 210

Query: 124 --DDPDGNSHVLSWLVIFYANLKMTQD-GLQVFDQMRVHNLMPHLHACTVLLNSLAKDRL 180
             D     S V   +VI    L  T D  L++F  MR     P      +L+++  K   
Sbjct: 211 MLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGK 270

Query: 181 TDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNT 240
            D  +++ K+M   G V ++  Y+ LI   C  + VD    LL +M  +  +  + T NT
Sbjct: 271 MDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNT 330

Query: 241 LIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI---- 296
           LI   CK G   EA  V D M   G SPD+VTYN+L+HG CR G+   AR L  D+    
Sbjct: 331 LIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARG 390

Query: 297 ---------------------------------KGATPNHVTYTTLIDGYCRANDLEEAL 323
                                             G  PN  TYT LI G+C A  ++  L
Sbjct: 391 LAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGL 450

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE--KKIAPDNVTCNTLIN 381
           +L   M   G+ P  V Y ++  +LCK GR   A  +L E  E  +  A  +      ++
Sbjct: 451 KLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVD 510

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
                G    A+     M+  G +       +L+ G CK+ +   A+ +L  ++D     
Sbjct: 511 GLLDAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEIMDL---- 566

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
                      Y  K   +A  K ++E V +G  ++  V + L+
Sbjct: 567 ----------AYGGKARGKA-AKFVEEMVGKGYEIEDGVLKPLL 599


>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 604

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 135/487 (27%), Positives = 241/487 (49%), Gaps = 15/487 (3%)

Query: 108 DFLSTPSV---------LNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRV 158
           DF + P++         +  L+  + D   + HV            +  +  + FD++  
Sbjct: 8   DFWAKPNLDISNSFTHFVERLIYTYKDWGSDPHVFDVFFQVLVEAGLLNEARKFFDKLLN 67

Query: 159 HNLMPHLHACTVLLNSLAKDR-LTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVD 217
           + +     +C + L  L+  R +  MV KV+ +  QLGV  N   YN+L+++  +   + 
Sbjct: 68  YGVALSAGSCNLYLTCLSSKRDMLGMVLKVFSEFPQLGVCWNTESYNILMNSLFRLGKIR 127

Query: 218 KVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLI 277
           +   LL  MEFK    D+ +Y T+I  YC  G   + + +   M+ +G+ P++ TY+S+I
Sbjct: 128 EAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSII 187

Query: 278 HGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVY 335
              C+ G++ E  ++ R++  +G  P+HV YTTLIDG+C+  + + A +L   M A+ + 
Sbjct: 188 LLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIV 247

Query: 336 PGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKV 395
           P  + +++++  L   G++ +A++L NEM +K   PD VT   LI+ YCK+G+   A  +
Sbjct: 248 PDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFL 307

Query: 396 KNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCN 455
            N+M++ GL  +  TY AL  G CK+ E+D A ELL  M   G   +  +Y+ +V+G C 
Sbjct: 308 HNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCK 367

Query: 456 KNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVI 515
             N    +KL++E    GL  D   Y  L+  + K  ++  A+ L   M   G+    V 
Sbjct: 368 AGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVT 427

Query: 516 YTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDR 575
           +  L      +G+ +    +L  M  + +M     Y S    Y   N   ++  S  + R
Sbjct: 428 FNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRN---NMRISTEIYR 484

Query: 576 GLMSKHI 582
           G+ ++ +
Sbjct: 485 GMCAQGV 491



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 117/419 (27%), Positives = 205/419 (48%), Gaps = 2/419 (0%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N +  S +++         +G +V  +M    + P     T L++   K   T   +K++
Sbjct: 179 NLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLF 238

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
            +M    +V +   ++ LI     S  V + +KL  EM  K    D  TY  LI  YCK 
Sbjct: 239 SEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKL 298

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTY 306
           G   +A  + ++M + G++P++VTY +L  G C+ G +  A  L  ++  KG   N  TY
Sbjct: 299 GEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTY 358

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
            T+++G C+A ++ +A++L E M   G++P  +TY +++    K G +  A  LL EM +
Sbjct: 359 NTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLD 418

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
           + + P  VT N L+N  C  G      ++   MLE G+M +  TY +++  +C    M I
Sbjct: 419 RGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRI 478

Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
           + E+  GM   G  P   +Y+ L+ G+C   N +    L  E V +   +  S Y ALI+
Sbjct: 479 STEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIK 538

Query: 487 RFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
            F K++K+  A++LF  M+  G++  + IY       +  G  +   ++ D+   + L+
Sbjct: 539 GFFKRKKLLEARQLFEEMRREGLVASAEIYNLFVDMNYEEGNMETTLELCDEAIEKCLL 597



 Score = 43.9 bits (102), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 30/124 (24%), Positives = 54/124 (43%), Gaps = 3/124 (2%)

Query: 462 LLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAY 521
           +LK+  EF   G+C +   Y  L+    +  K+  A  L   M+  G + D V YT++  
Sbjct: 94  VLKVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIID 153

Query: 522 AYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKH 581
            Y   GE +    ++ +M  + L   L  Y S      K  ++++      V R +M + 
Sbjct: 154 GYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVE---GEKVLREMMKRG 210

Query: 582 IFKE 585
           +F +
Sbjct: 211 VFPD 214


>gi|410109867|gb|AFV61013.1| pentatricopeptide repeat-containing protein 11, partial
           [Acantholippia salsoloides]
          Length = 410

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 117/403 (29%), Positives = 215/403 (53%), Gaps = 3/403 (0%)

Query: 74  YKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS-VLNALVKIHDDPDGNSHV 132
           ++H+L S+ TMIH L  ++    A+++++ +  R    + S V  A+++       + +V
Sbjct: 1   FRHTLYSYCTMIHFLCTHQMLPEAKSLIQVVVSRKGKGSASAVFAAILETKGTLRSDIYV 60

Query: 133 LSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMV 192
            S L+  Y      +D ++ +   R H        C  +L  L K +   +VW  YK+++
Sbjct: 61  FSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCKKVLEHLMKLKYFKLVWGFYKEIL 120

Query: 193 QLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHY 252
           + G  A+++ +N+L+H  CK  ++     +   +    +R  + ++NTL+  Y + G   
Sbjct: 121 ECGYPASLYFFNILMHRFCKEGEIRVARSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLD 180

Query: 253 EALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLI 310
           E   ++  M   G+ PD+ TY+ LI+G C+E ++  A  LF ++  KG  PN VT+TTLI
Sbjct: 181 EGFRLKSAMHASGVEPDVYTYSVLINGLCKESKIDGANELFDEMLDKGLVPNGVTFTTLI 240

Query: 311 DGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIA 370
           DG+C+   ++ A+ + + M ++ +   ++TYN+++  LCK+G ++ A  L++EM  K + 
Sbjct: 241 DGHCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQNLIDEMRMKGLK 300

Query: 371 PDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL 430
           PD +T  TLI+  CK GD  +A + + RM++  + LD   Y  LI G C+      A+++
Sbjct: 301 PDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVVYTTLISGLCQEGRSVDAEKM 360

Query: 431 LFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
           L  ML  G  P   +Y+ +++ +C K +     KLL E    G
Sbjct: 361 LREMLSVGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 403



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 95/279 (34%), Positives = 149/279 (53%), Gaps = 2/279 (0%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           G    +  +N L+H FC+EG +R AR +F  I   G  P+ V++ TL++GY R  DL+E 
Sbjct: 123 GYPASLYFFNILMHRFCKEGEIRVARSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEG 182

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            RL+  M A GV P V TY+ ++  LCKE +I  AN L +EM +K + P+ VT  TLI+ 
Sbjct: 183 FRLKSAMHASGVEPDVYTYSVLINGLCKESKIDGANELFDEMLDKGLVPNGVTFTTLIDG 242

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +CK G    AM++  +ML   L  D  TY  LI+G CK  ++  A+ L+  M   G  P 
Sbjct: 243 HCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQNLIDEMRMKGLKPD 302

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ L+DG C + + E   +     +   + +D  VY  LI   C++ +   A+++  
Sbjct: 303 KITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVVYTTLISGLCQEGRSVDAEKMLR 362

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
            M   G+  D+  YT +   + + G+    S +L +M R
Sbjct: 363 EMLSVGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQR 401



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 93/365 (25%), Positives = 168/365 (46%), Gaps = 40/365 (10%)

Query: 232 RADLFTYNTLIALYCKKGMHYEALA-VQDRMEREG-----------------ISPDIVTY 273
           R  L++Y T+I   C   M  EA + +Q  + R+G                 +  DI  +
Sbjct: 2   RHTLYSYCTMIHFLCTHQMLPEAKSLIQVVVSRKGKGSASAVFAAILETKGTLRSDIYVF 61

Query: 274 NSLIHGFCREGRMREA---RRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMA 330
           + LI  +   G +R+A    RL R+ K   P            C+   LE  ++L+    
Sbjct: 62  SGLITAYLESGFLRDAIECYRLTREHKFWVPFDT---------CK-KVLEHLMKLKYFKL 111

Query: 331 AKGVYPGVVT---------YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
             G Y  ++          +N ++ + CKEG IR A  + + + +  + P  V+ NTL+N
Sbjct: 112 VWGFYKEILECGYPASLYFFNILMHRFCKEGEIRVARSVFDAITKWGLRPSVVSFNTLMN 171

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
            Y ++GD     ++K+ M  +G+  D +TY  LI+G CK  ++D A EL   MLD G  P
Sbjct: 172 GYIRLGDLDEGFRLKSAMHASGVEPDVYTYSVLINGLCKESKIDGANELFDEMLDKGLVP 231

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
           +  +++ L+DG+C     +  +++  + +S+ L  D+  Y  LI   CKK  +  AQ L 
Sbjct: 232 NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQNLI 291

Query: 502 NLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKD 561
           + M+  G+  D + YT+L     + G+ +   +    M +  + +   +Y +  +   ++
Sbjct: 292 DEMRMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVVYTTLISGLCQE 351

Query: 562 NEILD 566
              +D
Sbjct: 352 GRSVD 356



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 83/266 (31%), Positives = 134/266 (50%), Gaps = 8/266 (3%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           SV +A+ K    P   S   + L+  Y  L    +G ++   M    + P ++  +VL+N
Sbjct: 149 SVFDAITKWGLRPSVVS--FNTLMNGYIRLGDLDEGFRLKSAMHASGVEPDVYTYSVLIN 206

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
            L K+   D   +++ +M+  G+V N   +  LI   CK+  VD   ++  +M  + + A
Sbjct: 207 GLCKESKIDGANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSA 266

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA---- 289
           DL TYNTLI   CKKG   +A  + D M  +G+ PD +TY +LI G C+EG +  A    
Sbjct: 267 DLITYNTLIYGLCKKGDLKQAQNLIDEMRMKGLKPDKITYTTLIDGCCKEGDLETAFEHR 326

Query: 290 RRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLC 349
           +R+ ++      + V YTTLI G C+     +A ++   M + G+ P   TY  I+ + C
Sbjct: 327 KRMIQE--NIRLDDVVYTTLISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFC 384

Query: 350 KEGRIRDANRLLNEMNEKKIAPDNVT 375
           K+G +   ++LL EM      P  VT
Sbjct: 385 KKGDVWTGSKLLKEMQRDGHVPSVVT 410


>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
          Length = 895

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 144/550 (26%), Positives = 254/550 (46%), Gaps = 13/550 (2%)

Query: 24  GHWA-KLLNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHW 82
           G W   +   +I S L+  A+  ++    +    P L   FF W+   +     S  +  
Sbjct: 62  GDWKLAIAASDIPSRLSPDAVSSLIFGGRSHSLHPKLLLDFFYWSRPRIA--PPSADAFA 119

Query: 83  TMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDD-------PDGNSHVLSW 135
            +   L     F  A  +L ++ L      P VL ++ +   D       P  ++ VL  
Sbjct: 120 RLAASLCAASLFPQANGLLHQMILA-HPHPPLVLASIQRAIQDTDHRSRSPSPSTAVLDV 178

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           LV  Y      ++  QV   M    L P    C  LL  L +    +++WK+   M   G
Sbjct: 179 LVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRADAMELLWKLKGFMEGAG 238

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
           ++ +++ Y+  I A CK+ D D  +K+  EM  +D   +  TYN +I+  C+ G   EA 
Sbjct: 239 ILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAF 298

Query: 256 AVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGY 313
             ++ M   G+SPD  TY +L++G C+  R++EA+ L  ++   G  PN V Y TL+DG+
Sbjct: 299 GFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGF 358

Query: 314 CRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDN 373
            +     EA  + + M + GV P  + Y++++R LCK G++  A++LL EM +  + PD 
Sbjct: 359 MKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDT 418

Query: 374 VTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFG 433
            T N L+  + +  D   A ++ N M  +G++ + ++Y  +I+G C+  E   A  LL  
Sbjct: 419 FTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEE 478

Query: 434 MLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEK 493
           M+  G  P+   Y+ L+ G+  + N     + L++     +  D+  Y +LI+      +
Sbjct: 479 MISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGR 538

Query: 494 VDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRS 553
           ++ A+  +  +Q  G++ D   Y+ L + Y + G  +    +L  M    L      Y  
Sbjct: 539 MEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTD 598

Query: 554 FSASYAKDNE 563
               Y K N+
Sbjct: 599 LLEGYFKSND 608



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 117/430 (27%), Positives = 206/430 (47%), Gaps = 4/430 (0%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           + D+M    L P++     L++   K+  T   + + K+M+  GV  N  +Y+ LI   C
Sbjct: 335 LLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLC 394

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           K   + +  KLL EM    +R D FTYN L+  + ++     A  + + M   GI P++ 
Sbjct: 395 KIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVY 454

Query: 272 TYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           +Y  +I+G C+ G  +EA  L  ++  +G  PN   Y  LI G+ +  ++  A    E M
Sbjct: 455 SYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKM 514

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
               V+P +  YNS+++ L   GR+ +A     ++ ++ + PD  T + LI+ YCK G+ 
Sbjct: 515 TKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNL 574

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
             A ++  +ML +GL  +  TY  L+ G+ K+ + +    +L  ML +G  P    Y  +
Sbjct: 575 EKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIV 634

Query: 450 VDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGI 509
           +       N E    +L E    GL  D+ +Y +LI   CK   ++ A  L + M   G+
Sbjct: 635 IRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGL 694

Query: 510 LGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLF- 568
               V Y +L   + R+G+     ++ D +  + L+     Y +      K+ +I D F 
Sbjct: 695 EPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFD 754

Query: 569 -WSHVVDRGL 577
            +  ++DRG+
Sbjct: 755 LYKEMLDRGI 764



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 112/451 (24%), Positives = 213/451 (47%), Gaps = 37/451 (8%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           +VF++MR  +   +     V+++ L +    +  +   ++MV  G+  +   Y  L++  
Sbjct: 264 KVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGL 323

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           CK S + + + LL EM    ++ ++  Y TL+  + K+G   EA  +   M   G+ P+ 
Sbjct: 324 CKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNK 383

Query: 271 VTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
           + Y++LI G C+ G++  A +L +++   G  P+  TY  L+ G+ + +D + A  L   
Sbjct: 384 IMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNE 443

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M   G+ P V +Y  ++  LC+ G  ++A  LL EM  + + P+      LI  + K G+
Sbjct: 444 MRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGN 503

Query: 389 TASAMKVKNRMLEA-----------------------------------GLMLDQFTYKA 413
            + A +   +M +A                                   GL+ D+FTY  
Sbjct: 504 ISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSG 563

Query: 414 LIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
           LIHG+CK   ++ A +LL  ML++G  P+  +Y+ L++GY   N+ E +  +L   +  G
Sbjct: 564 LIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSG 623

Query: 474 LCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACS 533
              D  +Y  +IR   + E ++ A  +   ++ NG++ D  IY+SL     +  + +   
Sbjct: 624 DKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAV 683

Query: 534 DILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
            +LD+M +  L   +  Y +    + +  +I
Sbjct: 684 GLLDEMAKEGLEPGIVCYNALIDGFCRSGDI 714



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 117/420 (27%), Positives = 208/420 (49%), Gaps = 39/420 (9%)

Query: 147 QDG-LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNV 205
           +DG  ++ ++MR   ++P++++  +++N L ++  +     + ++M+  G+  N  +Y  
Sbjct: 434 KDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAP 493

Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
           LI    K  ++    + L +M   +V  DLF YN+LI      G   EA     ++++ G
Sbjct: 494 LIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRG 553

Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEAL 323
           + PD  TY+ LIHG+C+ G + +A +L R +   G  PN  TYT L++GY ++ND E+  
Sbjct: 554 LVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVS 613

Query: 324 RLREVMAAKGVYP-----GVVT------------------------------YNSILRKL 348
            + + M   G  P     G+V                               Y+S++  L
Sbjct: 614 SILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGL 673

Query: 349 CKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ 408
           CK   +  A  LL+EM ++ + P  V  N LI+ +C+ GD + A  V + +L  GL+ + 
Sbjct: 674 CKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNC 733

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
            TY ALI G CK  ++  A +L   MLD G +P    Y+ L  G  +  + E  L L +E
Sbjct: 734 VTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEE 793

Query: 469 FVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
             +RG   +VS++  L+  FCK+ K+   ++L ++M    I+ ++     +   + +AG+
Sbjct: 794 MFNRGY-ANVSLFNTLVHGFCKRGKLQETEKLLHVMMDREIVPNAQTVEKVVSEFGKAGK 852



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 113/414 (27%), Positives = 186/414 (44%), Gaps = 9/414 (2%)

Query: 138 IFYANL-----KMTQDGL--QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKK 190
           I Y NL     K+ Q G   ++  +M    L P       L+    +    D  +++  +
Sbjct: 384 IMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNE 443

Query: 191 MVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGM 250
           M   G++ N++ Y ++I+  C++ +  +   LL EM  + ++ + F Y  LI  + K+G 
Sbjct: 444 MRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGN 503

Query: 251 HYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTT 308
              A    ++M +  + PD+  YNSLI G    GRM EA   +  +  +G  P+  TY+ 
Sbjct: 504 ISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSG 563

Query: 309 LIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKK 368
           LI GYC+  +LE+A +L   M   G+ P   TY  +L    K       + +L  M    
Sbjct: 564 LIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSG 623

Query: 369 IAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAK 428
             PDN     +I    +  +   A  V   + + GL+ D   Y +LI G CK  +M+ A 
Sbjct: 624 DKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAV 683

Query: 429 ELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRF 488
            LL  M   G  P    Y+ L+DG+C   +      + D  +++GL  +   Y ALI   
Sbjct: 684 GLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGN 743

Query: 489 CKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRR 542
           CK   +  A  L+  M   GI  D+ +Y  LA     A + +    + ++M+ R
Sbjct: 744 CKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNR 797



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 91/322 (28%), Positives = 160/322 (49%), Gaps = 4/322 (1%)

Query: 261 MEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRAND 318
           ME  GI PD+ TY++ I   C+      A+++F +++      N VTY  +I G CR+  
Sbjct: 234 MEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGA 293

Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT 378
           +EEA   +E M   G+ P   TY +++  LCK  R+++A  LL+EM+   + P+ V   T
Sbjct: 294 VEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGT 353

Query: 379 LINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAG 438
           L++ + K G TA A  +   M+ AG+  ++  Y  LI G CK  ++  A +LL  M+  G
Sbjct: 354 LVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVG 413

Query: 439 FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQ 498
             P   +Y+ L+ G+  +++++   +LL+E  + G+  +V  Y  +I   C+  +   A 
Sbjct: 414 LRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAG 473

Query: 499 RLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSF--SA 556
            L   M   G+  ++ +Y  L   + + G      + L+ M +  +   L  Y S     
Sbjct: 474 NLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGL 533

Query: 557 SYAKDNEILDLFWSHVVDRGLM 578
           S     E  + +++ V  RGL+
Sbjct: 534 STVGRMEEAEEYYAQVQKRGLV 555



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 109/428 (25%), Positives = 200/428 (46%), Gaps = 20/428 (4%)

Query: 80  SHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIF 139
           S+  MI+ L +N   K A N+LE++                 I +    N+ + + L+I 
Sbjct: 455 SYGIMINGLCQNGESKEAGNLLEEM-----------------ISEGLKPNAFMYAPLIIG 497

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
           ++         +  ++M   N+ P L     L+  L+     +   + Y ++ + G+V +
Sbjct: 498 HSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPD 557

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
              Y+ LIH  CK+ +++K ++LL +M    ++ +  TY  L+  Y K   + +  ++  
Sbjct: 558 EFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQ 617

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRAN 317
            M   G  PD   Y  +I    R   M  A  +  +++  G  P+   Y++LI G C+  
Sbjct: 618 SMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIA 677

Query: 318 DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCN 377
           D+E+A+ L + MA +G+ PG+V YN+++   C+ G I  A  + + +  K + P+ VT  
Sbjct: 678 DMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYT 737

Query: 378 TLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA 437
            LI+  CK GD   A  +   ML+ G+  D F Y  L  G   A +++ A  L   M + 
Sbjct: 738 ALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNR 797

Query: 438 GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYA 497
           G++ +   ++ LV G+C +   +   KLL   + R +  +      ++  F K  K+  A
Sbjct: 798 GYA-NVSLFNTLVHGFCKRGKLQETEKLLHVMMDREIVPNAQTVEKVVSEFGKAGKLGEA 856

Query: 498 QRLFNLMQ 505
            R+F  +Q
Sbjct: 857 HRVFAELQ 864



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 64/262 (24%), Positives = 122/262 (46%), Gaps = 3/262 (1%)

Query: 108 DFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHA 167
           D+    S+L +++   D PD  +H+   ++   +  +  +    V  ++  + L+P LH 
Sbjct: 608 DYEKVSSILQSMLGSGDKPD--NHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHI 665

Query: 168 CTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEME 227
            + L++ L K    +    +  +M + G+   I  YN LI   C+S D+ +   +   + 
Sbjct: 666 YSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSIL 725

Query: 228 FKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMR 287
            K +  +  TY  LI   CK G   +A  +   M   GI+PD   YN L  G      + 
Sbjct: 726 AKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLE 785

Query: 288 EARRLFRDIKGATPNHVT-YTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILR 346
           +A  L  ++      +V+ + TL+ G+C+   L+E  +L  VM  + + P   T   ++ 
Sbjct: 786 QALFLTEEMFNRGYANVSLFNTLVHGFCKRGKLQETEKLLHVMMDREIVPNAQTVEKVVS 845

Query: 347 KLCKEGRIRDANRLLNEMNEKK 368
           +  K G++ +A+R+  E+ +KK
Sbjct: 846 EFGKAGKLGEAHRVFAELQQKK 867



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 77/346 (22%), Positives = 135/346 (39%), Gaps = 29/346 (8%)

Query: 254 ALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREAR-RLFRDI------KGATPNHVTY 306
           A+A  D   R  +SPD V+  SLI G    GR      +L  D       + A P+   +
Sbjct: 67  AIAASDIPSR--LSPDAVS--SLIFG----GRSHSLHPKLLLDFFYWSRPRIAPPSADAF 118

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
             L    C A+   +A  L   M     +P +V   SI R       I+D +        
Sbjct: 119 ARLAASLCAASLFPQANGLLHQMILAHPHPPLV-LASIQRA------IQDTDH-----RS 166

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
           +  +P     + L++ Y K G   +A +V   M + GL   +     L+    +A  M++
Sbjct: 167 RSPSPSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRADAMEL 226

Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
             +L   M  AG  P   +YS  ++ +C   + +A  K+ +E   R   ++   Y  +I 
Sbjct: 227 LWKLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMIS 286

Query: 487 RFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMI 546
             C+   V+ A      M   G+  D+  Y +L     +    K    +LD+M    L  
Sbjct: 287 GLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKP 346

Query: 547 TLKIYRSFSASYAKDNEILDLF--WSHVVDRGLMSKHIFKEMQLRN 590
            + +Y +    + K+ +  + F     ++  G+    I  +  +R 
Sbjct: 347 NIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRG 392


>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
          Length = 553

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 143/483 (29%), Positives = 232/483 (48%), Gaps = 44/483 (9%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           +DG +  + M     +P +  CT L+    +   T     V + + Q G V ++  YNVL
Sbjct: 74  EDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVL 133

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           I   CKS ++D   ++L  M   +V  D+ TYNT++   C  G   +A+ V DR  ++  
Sbjct: 134 ISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKEC 190

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
            PD++TY  LI   C+E  + +A +L  ++  KG+ P+ VTY  LI+G C+   L+EA++
Sbjct: 191 YPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIK 250

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
               M + G  P V+T+N ILR +C  GR  DA +LL++M  K  +P  VT N LIN  C
Sbjct: 251 FLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLC 310

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEM-------------------- 424
           + G    A+ +  +M   G   +  +Y  L+HGFCK K+M                    
Sbjct: 311 RQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIV 370

Query: 425 ---------------DIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEF 469
                          D+A E+L  +   G SP   +Y+ ++DG       E  +KLLDE 
Sbjct: 371 TYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEM 430

Query: 470 VSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEP 529
             +GL  D+  Y +L+    ++ KVD A + F+ ++G GI  +++ Y S+     ++ + 
Sbjct: 431 RRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQT 490

Query: 530 KACSDILDDMYRRRLMITLKIYRSFSASYAKDN---EILDLFWSHVVDRGLMSKHIFKEM 586
               D L  M  +R   T   Y       A +    E LDL  + +  RGL+ K   +++
Sbjct: 491 DRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLL-NELCSRGLVKKSSAEQV 549

Query: 587 QLR 589
            ++
Sbjct: 550 AVK 552


>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
          Length = 691

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 123/357 (34%), Positives = 192/357 (53%), Gaps = 2/357 (0%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           ++ L +   MR     P++     L+ +  +    D   ++   M+  G+  N+  +N +
Sbjct: 167 KEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSM 226

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           ++  CK+  ++   K+  EM  + +  D  +YNTL+  YCK G  +EAL+V   M ++GI
Sbjct: 227 VNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGI 286

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALR 324
            PD+VT+ SLIH  C+ G +  A  L R ++  G   N VT+T LIDG+C+   L++AL 
Sbjct: 287 MPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALL 346

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
               M    + P VV YN+++   C  GR+ +A  LL+EM  K + PD VT +T+I+AYC
Sbjct: 347 AVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYC 406

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           K  DT SA ++  +MLE G++ D  TY +LI   C+ K +  A  L   M+  G  P   
Sbjct: 407 KNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEF 466

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
           +Y+ L+DG+C + N E  L L D+ V  G+  DV  Y  LI    K  +   AQ+L 
Sbjct: 467 TYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLL 523



 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 118/392 (30%), Positives = 202/392 (51%), Gaps = 3/392 (0%)

Query: 162 MPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEK 221
           +P + A   +L +L+   LT    + +  M+  GV  N++ YN+LI A C      +   
Sbjct: 113 VPSVLAYNAVLLALSDASLTS-ARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALS 171

Query: 222 LLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFC 281
           +L +M       ++ TYNTL+A + + G    A  +   M   G+ P++VT+NS+++G C
Sbjct: 172 ILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMC 231

Query: 282 REGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVV 339
           + G+M +AR++F ++  +G  P+ V+Y TL+ GYC+A    EAL +   M  KG+ P VV
Sbjct: 232 KAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVV 291

Query: 340 TYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRM 399
           T+ S++  +CK G +  A  L+ +M E+ +  + VT   LI+ +CK G    A+     M
Sbjct: 292 TFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGM 351

Query: 400 LEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNE 459
            +  +      Y ALI+G+C    MD A+ELL  M   G  P   +YS ++  YC   + 
Sbjct: 352 RQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDT 411

Query: 460 EALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
            +  +L  + + +G+  D   Y +LIR  C+++++  A  LF  M   G+  D   YTSL
Sbjct: 412 HSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSL 471

Query: 520 AYAYWRAGEPKACSDILDDMYRRRLMITLKIY 551
              + + G  +    + D M +  ++  +  Y
Sbjct: 472 IDGHCKEGNVERALSLHDKMVKAGVLPDVVTY 503



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 109/327 (33%), Positives = 173/327 (52%), Gaps = 3/327 (0%)

Query: 195 GVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEA 254
           G V ++  YN ++ A   +S +    +    M    V  +++TYN LI   C +G   EA
Sbjct: 111 GYVPSVLAYNAVLLALSDAS-LTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEA 169

Query: 255 LAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDG 312
           L++   M   G  P++VTYN+L+  F R G +  A RL   +   G  PN VT+ ++++G
Sbjct: 170 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNG 229

Query: 313 YCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPD 372
            C+A  +E+A ++ + M  +G+ P  V+YN+++   CK G   +A  +  EM +K I PD
Sbjct: 230 MCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPD 289

Query: 373 NVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLF 432
            VT  +LI+  CK G+   A+ +  +M E GL +++ T+ ALI GFCK   +D A   + 
Sbjct: 290 VVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVR 349

Query: 433 GMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKE 492
           GM      PS   Y+ L++GYC     +   +LL E  ++GL  DV  Y  +I  +CK  
Sbjct: 350 GMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNC 409

Query: 493 KVDYAQRLFNLMQGNGILGDSVIYTSL 519
               A  L   M   G+L D++ Y+SL
Sbjct: 410 DTHSAFELNQQMLEKGVLPDAITYSSL 436



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 102/324 (31%), Positives = 178/324 (54%), Gaps = 6/324 (1%)

Query: 259 DRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGAT--PNHVTYTTLIDGYCRA 316
           D M  +G++P++ TYN LI   C  G  +EA  + RD++GA   PN VTY TL+  + RA
Sbjct: 139 DSMLSDGVAPNVYTYNILIRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRA 198

Query: 317 NDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTC 376
            +++ A RL  +M   G+ P +VT+NS++  +CK G++ DA ++ +EM  + +APD V+ 
Sbjct: 199 GEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSY 258

Query: 377 NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD 436
           NTL+  YCK G +  A+ V   M + G+M D  T+ +LIH  CKA  ++ A  L+  M +
Sbjct: 259 NTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRE 318

Query: 437 AGFSPSYCSYSWLVDGYCNKNN-EEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVD 495
            G   +  +++ L+DG+C K   ++ALL +      R +   V  Y ALI  +C   ++D
Sbjct: 319 RGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCR-IKPSVVCYNALINGYCMVGRMD 377

Query: 496 YAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFS 555
            A+ L + M+  G+  D V Y+++  AY +  +  +  ++   M  + ++     Y S  
Sbjct: 378 EARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLI 437

Query: 556 ASYAKDNEILD--LFWSHVVDRGL 577
               ++  + D  + + +++  GL
Sbjct: 438 RVLCEEKRLSDAHVLFKNMIKLGL 461



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 116/439 (26%), Positives = 191/439 (43%), Gaps = 58/439 (13%)

Query: 126 PDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVW 185
           PDG S+  + LV  Y     + + L VF +M    +MP +   T L++ + K    +   
Sbjct: 253 PDGVSY--NTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAV 310

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
            + ++M + G+  N   +  LI   CK   +D     +  M    ++  +  YN LI  Y
Sbjct: 311 TLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGY 370

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR----------------------- 282
           C  G   EA  +   ME +G+ PD+VTY+++I  +C+                       
Sbjct: 371 CMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDA 430

Query: 283 ------------EGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
                       E R+ +A  LF+++   G  P+  TYT+LIDG+C+  ++E AL L + 
Sbjct: 431 ITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDK 490

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN------- 381
           M   GV P VVTY+ ++  L K  R  +A +LL ++  ++  P N   + L++       
Sbjct: 491 MVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALMHCCRKAEL 550

Query: 382 --------AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLF- 432
                    +C  G    A KV   ML+    LD   Y  LIHG C+A   ++ K L F 
Sbjct: 551 KSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAG--NVMKALSFH 608

Query: 433 -GMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
             ML  GF+P+  S   L+ G           +++ + ++     D    +ALI     +
Sbjct: 609 KQMLQRGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNCCSLADAEASKALIDLNLNE 668

Query: 492 EKVDYAQRLFNLMQGNGIL 510
             VD    + + M  +G+L
Sbjct: 669 GNVDAVLDVLHGMAKDGLL 687



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 90/322 (27%), Positives = 147/322 (45%), Gaps = 5/322 (1%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEA 322
           G  P ++ YN+++     +  +  ARR F  +   G  PN  TY  LI   C     +EA
Sbjct: 111 GYVPSVLAYNAVLLAL-SDASLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEA 169

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
           L +   M   G  P VVTYN+++    + G +  A RL+  M +  + P+ VT N+++N 
Sbjct: 170 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNG 229

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
            CK G    A KV + M+  GL  D  +Y  L+ G+CKA     A  +   M   G  P 
Sbjct: 230 MCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPD 289

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +++ L+   C   N E  + L+ +   RGL ++   + ALI  FCKK  +D A     
Sbjct: 290 VVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVR 349

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDN 562
            M+   I    V Y +L   Y   G      ++L +M  + L   +  Y +  ++Y K+ 
Sbjct: 350 GMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNC 409

Query: 563 EILDLFW--SHVVDRGLMSKHI 582
           +    F     ++++G++   I
Sbjct: 410 DTHSAFELNQQMLEKGVLPDAI 431


>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
 gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
          Length = 932

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 114/380 (30%), Positives = 205/380 (53%), Gaps = 2/380 (0%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           ++FD+M    L P +     L+++L K        +++ K+++ GV  N+  +N+ I   
Sbjct: 281 ELFDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGL 340

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           CK   +D+  +LL  +  + +R D+ TYNT+I   C+K    EA     +M   G  P+ 
Sbjct: 341 CKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPND 400

Query: 271 VTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
            TYNS+I G+C++G + +A R+ +D   KG  P+  TY +L++G+C+  D ++A+ + + 
Sbjct: 401 FTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKD 460

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
              KG+ P ++ YN++++ LC++G I  A +L+NEM EK   PD  T N +IN  CK+G 
Sbjct: 461 GLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGC 520

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
            + A  +    +  G + D FTY  L+ G+C+  ++D A EL+  M   G +P   +Y+ 
Sbjct: 521 LSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNT 580

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG 508
           L++G C     E ++++      +G   ++  Y  +I   C  +KV+ A  L   M+  G
Sbjct: 581 LLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKG 640

Query: 509 ILGDSVIYTSLAYAYWRAGE 528
           +  D V + +L   + + G+
Sbjct: 641 LTPDVVSFGTLITGFCKVGD 660



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 125/501 (24%), Positives = 240/501 (47%), Gaps = 21/501 (4%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHV 132
            +KH+L ++ +M+  L  +  F   +N+L ++         ++ N L++          V
Sbjct: 114 GFKHTLFTYKSMLQKLGFHGKFNEMENLLSEM-------RSNLDNTLLE---------GV 157

Query: 133 LSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMV 192
               + FY      Q+ +  F++M + N  P +++   ++N L +    +   KVY +M 
Sbjct: 158 YVEAMRFYGRKGKIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMK 217

Query: 193 QLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHY 252
              V ++++ Y + I + C++       +LL  M      ++   Y T++  + + G + 
Sbjct: 218 DKKVESDVYTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDND 277

Query: 253 EALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLI 310
            A  + D M    + PD+ T+N L+H  C++G + E+ RLF  +  +G  PN  T+   I
Sbjct: 278 RARELFDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFI 337

Query: 311 DGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIA 370
            G C+   L+ A+RL   ++ +G+ P VVTYN+++  LC++ R+ +A   L++M      
Sbjct: 338 QGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFE 397

Query: 371 PDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL 430
           P++ T N++I+ YCK G    A ++    +  G   D+FTY +L++GFC+  + D A  +
Sbjct: 398 PNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAV 457

Query: 431 LFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCK 490
               L  G  PS   Y+ L+ G C +      L+L++E   +G   D+  Y  +I   CK
Sbjct: 458 FKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCK 517

Query: 491 KEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL---MIT 547
              +  A  L       G + D   Y +L   Y R  +  +  ++++ M+ + +   +IT
Sbjct: 518 MGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVIT 577

Query: 548 LKIYRSFSASYAKDNEILDLF 568
                +     AK  E++++F
Sbjct: 578 YNTLLNGLCKTAKSEEVMEIF 598



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 112/389 (28%), Positives = 183/389 (47%), Gaps = 3/389 (0%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N    + ++  Y    M  D  ++          P       L+N   +D   D    V+
Sbjct: 399 NDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVF 458

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
           K  +  G+  +I +YN LI   C+   +    +L+ EM  K  + D++TYN +I   CK 
Sbjct: 459 KDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKM 518

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTY 306
           G   +A  +      +G  PDI TYN+L+ G+CR+ ++  A  L   +  +G TP+ +TY
Sbjct: 519 GCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITY 578

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
            TL++G C+    EE + + + M  KG  P ++TYN+I+  LC   ++ +A  LL EM  
Sbjct: 579 NTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKS 638

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRM-LEAGLMLDQFTYKALIHGFCKAKEMD 425
           K + PD V+  TLI  +CK+GD   A  +   M  +  +     TY  +I  F +   M 
Sbjct: 639 KGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMK 698

Query: 426 IAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
           +A  L   M   G  P   +Y  L+DG+C   N     K L E + +G    ++ +  ++
Sbjct: 699 MALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVL 758

Query: 486 RRFCKKEKVDYAQRLFNLMQGNGILGDSV 514
              C + KV  A  + +LM    I+ D+V
Sbjct: 759 NCLCVEHKVQEAVGIIHLMVQKDIVPDTV 787



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 73/236 (30%), Positives = 125/236 (52%), Gaps = 5/236 (2%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           +++ ++M    + P +     LLN L K   ++ V +++K M + G   NI  YN +I +
Sbjct: 560 IELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIES 619

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMERE-GISP 268
            C S  V++   LL EM+ K +  D+ ++ TLI  +CK G    A  +   ME++  +S 
Sbjct: 620 LCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSH 679

Query: 269 DIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLR 326
              TYN +I  F  +  M+ A RLF ++K  G  P++ TY  LIDG+C+  ++ +  +  
Sbjct: 680 TTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFL 739

Query: 327 EVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
                KG  P + T+  +L  LC E ++++A  +++ M +K I PD V  NT+  A
Sbjct: 740 LENIEKGFIPSLTTFGRVLNCLCVEHKVQEAVGIIHLMVQKDIVPDTV--NTIFEA 793


>gi|410109873|gb|AFV61016.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
           citrodora]
          Length = 380

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 114/373 (30%), Positives = 208/373 (55%), Gaps = 3/373 (0%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS-VLNALVKIHDDPDGNSH 131
            ++H+L S+ TMIH L  ++    A+++++ +  R    + S V  A+++       + +
Sbjct: 6   TFRHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIY 65

Query: 132 VLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKM 191
           V S L+  Y      +D ++ +   R H     L  C  +L  L K +   +VW  YK++
Sbjct: 66  VFSGLITAYLESGFLRDAIECYRLTREHKFWVPLDTCRKVLEHLMKLKYFKLVWGFYKEI 125

Query: 192 VQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMH 251
           ++ G  A+++ +N+L+   CK  D+   + +L  +    +R  + ++NTLI  Y + G  
Sbjct: 126 LECGYPASLYFFNILMQRFCKEGDIRVAQLVLNAITKWGLRPSVVSFNTLINGYIRLGDL 185

Query: 252 YEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTL 309
            E   ++  M   G+ PD+ TY+ LI+G C+E +M +A  LF ++  KG  PN VT+TTL
Sbjct: 186 DEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGMVPNGVTFTTL 245

Query: 310 IDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI 369
           IDG+C+   ++ A+ + + M ++ + P ++TYN+++  LCK+G ++ A+ L++EM+ + +
Sbjct: 246 IDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGELKQAHDLIDEMSMEGL 305

Query: 370 APDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKE 429
            PD +T  TLI+  CK GD  +A + + RM++  + LD   Y ALI G C+      A++
Sbjct: 306 KPDKITYTTLIDGCCKEGDMETAFEHQKRMIQENIRLDDVVYTALISGLCQEGRSVDAEK 365

Query: 430 LLFGMLDAGFSPS 442
           +L  ML  G  P+
Sbjct: 366 MLREMLSVGLKPN 378



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 87/247 (35%), Positives = 134/247 (54%), Gaps = 2/247 (0%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           G    +  +N L+  FC+EG +R A+ +   I   G  P+ V++ TLI+GY R  DL+E 
Sbjct: 129 GYPASLYFFNILMQRFCKEGDIRVAQLVLNAITKWGLRPSVVSFNTLINGYIRLGDLDEG 188

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            RL+  M A GV P V TY+ ++  LCKE ++ DAN L +EM +K + P+ VT  TLI+ 
Sbjct: 189 FRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGMVPNGVTFTTLIDG 248

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +CK G    AM++  +ML   L  D  TY  LI+G CK  E+  A +L+  M   G  P 
Sbjct: 249 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGELKQAHDLIDEMSMEGLKPD 308

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ L+DG C + + E   +     +   + +D  VY ALI   C++ +   A+++  
Sbjct: 309 KITYTTLIDGCCKEGDMETAFEHQKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLR 368

Query: 503 LMQGNGI 509
            M   G+
Sbjct: 369 EMLSVGL 375



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 96/362 (26%), Positives = 167/362 (46%), Gaps = 34/362 (9%)

Query: 232 RADLFTYNTLIALYCKKGMHYEALA-VQDRMEREGISP-----------------DIVTY 273
           R  L +Y T+I   C   M  EA + +Q  + R+G                    DI  +
Sbjct: 8   RHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVF 67

Query: 274 NSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKG 333
           + LI  +   G +R+A   +R     T  H  +  L    CR   LE  ++L+      G
Sbjct: 68  SGLITAYLESGFLRDAIECYR----LTREHKFWVPL--DTCRKV-LEHLMKLKYFKLVWG 120

Query: 334 VYPGVVT---------YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
            Y  ++          +N ++++ CKEG IR A  +LN + +  + P  V+ NTLIN Y 
Sbjct: 121 FYKEILECGYPASLYFFNILMQRFCKEGDIRVAQLVLNAITKWGLRPSVVSFNTLINGYI 180

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           ++GD     ++K+ M  +G+  D +TY  LI+G CK  +MD A EL   MLD G  P+  
Sbjct: 181 RLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGMVPNGV 240

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
           +++ L+DG+C     +  +++  + +S+ L  D+  Y  LI   CKK ++  A  L + M
Sbjct: 241 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGELKQAHDLIDEM 300

Query: 505 QGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
              G+  D + YT+L     + G+ +   +    M +  + +   +Y +  +   ++   
Sbjct: 301 SMEGLKPDKITYTTLIDGCCKEGDMETAFEHQKRMIQENIRLDDVVYTALISGLCQEGRS 360

Query: 565 LD 566
           +D
Sbjct: 361 VD 362



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 83/321 (25%), Positives = 142/321 (44%), Gaps = 24/321 (7%)

Query: 232 RADLFTYNTLIALYCKKGMHYEALAVQDRMEREG---ISPDI----------VTYNSLIH 278
           R+D++ ++ LI  Y + G   +A+    R+ RE    +  D           + Y  L+ 
Sbjct: 61  RSDIYVFSGLITAYLESGFLRDAIECY-RLTREHKFWVPLDTCRKVLEHLMKLKYFKLVW 119

Query: 279 GFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGV 338
           GF +E  + E         G   +   +  L+  +C+  D+  A  +   +   G+ P V
Sbjct: 120 GFYKE--ILEC--------GYPASLYFFNILMQRFCKEGDIRVAQLVLNAITKWGLRPSV 169

Query: 339 VTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNR 398
           V++N+++    + G + +  RL + M+   + PD  T + LIN  CK      A ++ + 
Sbjct: 170 VSFNTLINGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDE 229

Query: 399 MLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNN 458
           ML+ G++ +  T+  LI G CK   +D+A E+   ML    SP   +Y+ L+ G C K  
Sbjct: 230 MLDKGMVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGE 289

Query: 459 EEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTS 518
            +    L+DE    GL  D   Y  LI   CK+  ++ A      M    I  D V+YT+
Sbjct: 290 LKQAHDLIDEMSMEGLKPDKITYTTLIDGCCKEGDMETAFEHQKRMIQENIRLDDVVYTA 349

Query: 519 LAYAYWRAGEPKACSDILDDM 539
           L     + G       +L +M
Sbjct: 350 LISGLCQEGRSVDAEKMLREM 370


>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Vitis vinifera]
          Length = 778

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 126/416 (30%), Positives = 217/416 (52%), Gaps = 2/416 (0%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N +  + LV  Y  +   ++   V + M  +NL+P +    +L+N L  +   +  +K+ 
Sbjct: 277 NRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLR 336

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
            +M  L ++ ++  YN LI+ C + S + +  KLL EM  K V+ +  T+N ++  YCK+
Sbjct: 337 DEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKE 396

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTY 306
           G   +A     +ME  G SPD VTYN+LI+G+C+ G M EA R   ++  K    + VT 
Sbjct: 397 GKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTL 456

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
            T++   CR   LEEA +L      +G +   V+Y +++    K+G +  A +L +EM E
Sbjct: 457 NTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKE 516

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
           K+I P  VT N +I   C+ G T  A+   N +LE+GL+ D+ TY  ++HG+C+  +++ 
Sbjct: 517 KEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEK 576

Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
           A +    M++  F P   + + L+ G C +   E  LKL + +VS+G  +D   Y  LI 
Sbjct: 577 AFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLIT 636

Query: 487 RFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRR 542
             CK+ ++D A  L + M+   +  D   Y ++  A   +G  +   + +  M  +
Sbjct: 637 SLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEK 692



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 141/513 (27%), Positives = 240/513 (46%), Gaps = 46/513 (8%)

Query: 57  PSLSCAFFKWAESAVPNYKHSLQSHWTMIHILT-KNKHFKSAQNMLEKIALRDFLSTPSV 115
           P++  +FFKWA++ +P + H+       +      ++ F  A+++L       F++T   
Sbjct: 66  PNILISFFKWAQTNLPTFPHNSLPSLLSLLPSLFSHRKFSDAKSLL-----LGFIATDRR 120

Query: 116 LNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSL 175
            +  + I      +  +L   +  Y          Q+F +M+   L P+L  C  LLNSL
Sbjct: 121 HDLHLSILRLTSPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSL 180

Query: 176 AKDRLTDMV---WKVYKKMVQLGVVANIHLYNVLIHA----------------------- 209
            +   +  V    + +   ++LG+V N++ +N++I+                        
Sbjct: 181 VRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCS 240

Query: 210 ------------CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAV 257
                        CK   +     LL +M+ + +  +  TYN L+  YCK G   EA  V
Sbjct: 241 PDNVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANV 300

Query: 258 QDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGAT--PNHVTYTTLIDGYCR 315
            + M +  + PD+ TYN LI+G C EGR+ EA +L  +++     P+ V+Y TLI+G   
Sbjct: 301 IELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLE 360

Query: 316 ANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVT 375
            + + EA +L E M+ KGV P  VT+N +++  CKEG++ DA+  + +M E   +PD VT
Sbjct: 361 WSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVT 420

Query: 376 CNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGML 435
            NTLIN YCK G+   A +  + M    + +D  T   ++   C+ K+++ A +LL    
Sbjct: 421 YNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSAR 480

Query: 436 DAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVD 495
             G+     SY  L+ GY    N +  LKL DE   + +      Y  +I   C+  K +
Sbjct: 481 KRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTE 540

Query: 496 YAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
            A    N +  +G+L D   Y ++ + Y R G+
Sbjct: 541 QAISKLNELLESGLLPDETTYNTILHGYCREGD 573



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 110/427 (25%), Positives = 200/427 (46%), Gaps = 49/427 (11%)

Query: 167 ACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEM 226
           A ++LL  +A DR  D+   + +         +  L +  I A  +S       ++  +M
Sbjct: 107 AKSLLLGFIATDRRHDLHLSILRL-----TSPSKALLDTAIGAYVQSGQPHHAFQIFKKM 161

Query: 227 EFKDVRADLFTYNTLIALYCK----KGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR 282
           +   +R +L T NTL+    +      + +   A  D + + GI P++ T+N +I+G+C 
Sbjct: 162 KRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAI-KLGIVPNVNTFNIVIYGYCL 220

Query: 283 EGRMREARRLFRDIKGA---TPNHVTYTTLID---------------------------- 311
           E + ++A   F ++ G    +P++VTY T++D                            
Sbjct: 221 ENKFKDAVE-FLNVMGKYNCSPDNVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRN 279

Query: 312 -------GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM 364
                  GYC+   L+EA  + E+M    + P V TYN ++  LC EGRI +A +L +EM
Sbjct: 280 TYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEM 339

Query: 365 NEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEM 424
              K+ PD V+ NTLIN   +    + A K+   M E G+  +  T+  ++  +CK  +M
Sbjct: 340 ENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKM 399

Query: 425 DIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRAL 484
           D A   +  M ++GFSP   +Y+ L++GYC   N     + +DE   + + +D      +
Sbjct: 400 DDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTI 459

Query: 485 IRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL 544
           +R  C+++K++ A +L +  +  G   D V Y +L   Y++ G       + D+M  + +
Sbjct: 460 LRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEI 519

Query: 545 MITLKIY 551
           + +   Y
Sbjct: 520 IPSTVTY 526



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 113/443 (25%), Positives = 193/443 (43%), Gaps = 31/443 (6%)

Query: 53  CCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLST 112
           C     +S AF    E +    K +  +H  M+    K      A N + K+    F   
Sbjct: 358 CLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGF--- 414

Query: 113 PSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLL 172
                        PD  ++  + L+  Y       +  +  D+M   N+         +L
Sbjct: 415 ------------SPDCVTY--NTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTIL 460

Query: 173 NSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVR 232
            +L +++  +  +K+     + G   +   Y  LI    K  +VD+  KL  EM+ K++ 
Sbjct: 461 RTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEII 520

Query: 233 ADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRL 292
               TYN +I   C+ G   +A++  + +   G+ PD  TYN+++HG+CREG + +A + 
Sbjct: 521 PSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQF 580

Query: 293 FRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
              +      P+  T   L+ G C    LE+AL+L     +KG     VTYN+++  LCK
Sbjct: 581 HNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCK 640

Query: 351 EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
           EGR+ DA  LL+EM EK++ PD+ T N +I A    G    A +  ++MLE G + DQ  
Sbjct: 641 EGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPDQVL 700

Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFV 470
                       ++D  + ++          S  +YS  +   C +   +  +++  E  
Sbjct: 701 ------------QLDKNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESK 748

Query: 471 SRGLCVDVSVYRALIRRFCKKEK 493
            +G+ VD S Y  L+    K+ K
Sbjct: 749 QKGITVDKSTYINLMDGLIKRRK 771



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 85/367 (23%), Positives = 152/367 (41%), Gaps = 44/367 (11%)

Query: 44  HKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEK 103
           +  L+N Y  C   ++  AF    E    N K    +  T++  L + K  + A  +L  
Sbjct: 421 YNTLINGY--CKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSS 478

Query: 104 IALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMP 163
              R +         L+ +    DGN                    L+++D+M+   ++P
Sbjct: 479 ARKRGYFIDEVSYGTLI-VGYFKDGN----------------VDRALKLWDEMKEKEIIP 521

Query: 164 HLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLL 223
                  ++  L +   T+       ++++ G++ +   YN ++H  C+  DV+K  +  
Sbjct: 522 STVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFH 581

Query: 224 CEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCRE 283
            +M     + D+FT N L+   C +G+  +AL + +    +G + D VTYN+LI   C+E
Sbjct: 582 NKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKE 641

Query: 284 GRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPG---- 337
           GR+ +A  L  ++  K   P+H TY  +I     +  + EA      M  KG  P     
Sbjct: 642 GRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPDQVLQ 701

Query: 338 -------------------VVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT 378
                               V Y+  +++LC EG+ +DA R+  E  +K I  D  T   
Sbjct: 702 LDKNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYIN 761

Query: 379 LINAYCK 385
           L++   K
Sbjct: 762 LMDGLIK 768


>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
 gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
          Length = 725

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 138/467 (29%), Positives = 232/467 (49%), Gaps = 20/467 (4%)

Query: 80  SHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIF 139
           ++ TMI+ L+K+     A  +LE++    F   P+V +    +H                
Sbjct: 46  TYNTMINGLSKSDRLDDAIRLLEEMVDNGF--APNVFSYNTVLHG--------------- 88

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
           +      ++ L + +QM +    P + + T ++N L K    D   +V  KM+Q G   N
Sbjct: 89  FCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPN 148

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
           +  Y  L+   C+  D+D   +L+ +M  +  R +  TYN ++   C       AL +  
Sbjct: 149 VITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFK 208

Query: 260 RMEREG-ISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRA 316
            ME  G   PD+ TY++++    + G++ +A RL   +  KG +PN VTY++L+ G C+A
Sbjct: 209 EMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKA 268

Query: 317 NDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTC 376
             L+EA  L + M   G  P +VTYN+I+   CK GRI +A  LL EM +    P+ VT 
Sbjct: 269 GKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTY 328

Query: 377 NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD 436
             L++A+CK G    A+ +   M+E G + + FTY +L+  FCK  E++ A +LL  M+ 
Sbjct: 329 TVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQ 388

Query: 437 AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDY 496
            G  P+  SY+ ++ G C        + LL++ +S     D+  +  +I   CK  +VD 
Sbjct: 389 KGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDI 448

Query: 497 AQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRR 543
           A  LFNL+Q +G   + V Y SL +   ++        +L +M R++
Sbjct: 449 AYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQ 495



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 148/488 (30%), Positives = 242/488 (49%), Gaps = 27/488 (5%)

Query: 64  FKWAESAVPN-YKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALR----DFLSTPSVLNA 118
            +  E  V N +  ++ S+ T++H   K    ++A  +LE++ +R    D +S  +V+N 
Sbjct: 64  IRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVING 123

Query: 119 LVKIHDDPDGNSHVLSWL--------VIFYANLK------MTQDG-LQVFDQMRVHNLMP 163
           L K+ D  D    V+  +        VI Y  L          DG +++  +M      P
Sbjct: 124 LCKL-DQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRP 182

Query: 164 HLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG-VVANIHLYNVLIHACCKSSDVDKVEKL 222
           +      +++ L   R  D   +++K+M + G    ++  Y+ ++ +  KS  VD   +L
Sbjct: 183 NAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRL 242

Query: 223 LCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR 282
           +  M  K    ++ TY++L+   CK G   EA A+  RM R G SP+IVTYN++I G C+
Sbjct: 243 VEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCK 302

Query: 283 EGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVT 340
            GR+ EA  L  ++   G  PN VTYT L+D +C+    E+A+ L EVM  KG  P + T
Sbjct: 303 LGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFT 362

Query: 341 YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML 400
           YNS+L   CK+  +  A +LL+ M +K   P+ V+ NT+I   CK       + +  +ML
Sbjct: 363 YNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQML 422

Query: 401 EAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEE 460
               + D  T+  +I   CK   +DIA EL   + ++G +P+  +Y+ LV G C     +
Sbjct: 423 SNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFD 482

Query: 461 ALLKLLDEFVSR-GLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
               LL E   + G   D+  Y  +I   CK ++VD A +LF  M  +G+  D V Y+ +
Sbjct: 483 QAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIV 542

Query: 520 --AYAYWR 525
             +   WR
Sbjct: 543 ISSLCKWR 550



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 113/365 (30%), Positives = 189/365 (51%), Gaps = 3/365 (0%)

Query: 203 YNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRME 262
           YN +I+   KS  +D   +LL EM       ++F+YNT++  +CK      AL + ++M 
Sbjct: 47  YNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMV 106

Query: 263 REGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLE 320
             G  PD+V+Y ++I+G C+  ++ EA R+   +  +G  PN +TY TL+DG+CR  DL+
Sbjct: 107 MRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLD 166

Query: 321 EALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNV-TCNTL 379
            A+ L   M  +G  P  +TYN+I+  LC   ++  A +L  EM E    P +V T +T+
Sbjct: 167 GAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTI 226

Query: 380 INAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGF 439
           +++  K G    A ++   M+  G   +  TY +L+HG CKA ++D A  LL  M  +G 
Sbjct: 227 VDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGC 286

Query: 440 SPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQR 499
           SP+  +Y+ ++DG+C     +    LL+E V  G   +V  Y  L+  FCK  K + A  
Sbjct: 287 SPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIG 346

Query: 500 LFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYA 559
           L  +M   G + +   Y SL   + +  E +    +L  M ++  +  +  Y +  A   
Sbjct: 347 LVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLC 406

Query: 560 KDNEI 564
           K  ++
Sbjct: 407 KATKV 411



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 119/383 (31%), Positives = 194/383 (50%), Gaps = 3/383 (0%)

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
           +  L    +   + ++M      P++   TVLL++  K    +    + + MV+ G V N
Sbjct: 300 HCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPN 359

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
           +  YN L+   CK  +V++  +LL  M  K    ++ +YNT+IA  CK    +E + + +
Sbjct: 360 LFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLE 419

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRAN 317
           +M      PDIVT+N++I   C+  R+  A  LF  I+  G TPN VTY +L+ G C++ 
Sbjct: 420 QMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSR 479

Query: 318 DLEEA-LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTC 376
             ++A   LRE+   +G  P ++TYN+++  LCK  R+  A +L  +M    +APD+VT 
Sbjct: 480 RFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTY 539

Query: 377 NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD 436
           + +I++ CK      A  V   ML+ G      TY  LI GFCK   +D A E+L  +L 
Sbjct: 540 SIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLS 599

Query: 437 AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDY 496
            G  P   ++S  +D    +       +LL+  +  GL  D   Y  L++ FC   + + 
Sbjct: 600 KGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTED 659

Query: 497 AQRLFNLMQGNGILGDSVIYTSL 519
           A  LF +M+  G   D+  YT+L
Sbjct: 660 AVDLFEVMRQCGCEPDNATYTTL 682



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 97/320 (30%), Positives = 162/320 (50%), Gaps = 4/320 (1%)

Query: 261 MEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI-KGATPNHVTYTTLIDGYCRANDL 319
           M R+G+      + S++ G C  G+  +A   FR++ K   P+ VTY T+I+G  +++ L
Sbjct: 1   MNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKTCPPDSVTYNTMINGLSKSDRL 60

Query: 320 EEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTL 379
           ++A+RL E M   G  P V +YN++L   CK  R+ +A  LL +M  +   PD V+  T+
Sbjct: 61  DDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTV 120

Query: 380 INAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGF 439
           IN  CK+     A +V ++M++ G   +  TY  L+ GFC+  ++D A EL+  M + G+
Sbjct: 121 INGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGY 180

Query: 440 SPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLC-VDVSVYRALIRRFCKKEKVDYAQ 498
            P+  +Y+ ++ G C+    ++ L+L  E    G C  DV  Y  ++    K  KVD A 
Sbjct: 181 RPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDAC 240

Query: 499 RLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASY 558
           RL   M   G   + V Y+SL +   +AG+    + +L  M R      +  Y +    +
Sbjct: 241 RLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGH 300

Query: 559 AKDNEILDLF--WSHVVDRG 576
            K   I + +     +VD G
Sbjct: 301 CKLGRIDEAYHLLEEMVDGG 320


>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
 gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
          Length = 611

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 139/502 (27%), Positives = 249/502 (49%), Gaps = 7/502 (1%)

Query: 57  PSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDF-LSTPSV 115
           P L   +F W+   + N  +S++    ++++L   KH+   +++L+     +   S   +
Sbjct: 87  PLLVLRYFNWSRREL-NVNYSIELICRLLNLLANAKHYPKIRSILDSFVKGETNCSISLI 145

Query: 116 LNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSL 175
            ++L         NS +   LV+ Y     T  GL+ F +   +     + +C  LL++L
Sbjct: 146 FHSLSVCSGQFCANSIIADMLVLAYVENSKTVLGLEAFKRAGDYRYKLSVLSCNPLLSAL 205

Query: 176 AKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADL 235
            K+     V  VYK+M++  +  N+  +N +I+  CK   ++K   ++ +M+      ++
Sbjct: 206 VKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNV 265

Query: 236 FTYNTLIALYCKK---GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRL 292
            TYNTLI  YCK    G  Y+A A+   M    +SP+ VT+N LI GFC++  +  A ++
Sbjct: 266 VTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKV 325

Query: 293 FRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
           F ++  +G  P  VTY +L++G C    L EA  L + M +  + P V+TYN+++   CK
Sbjct: 326 FEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCK 385

Query: 351 EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
           +  + +A  L + + ++ + P+ +T NTL++ YCK G    A  ++  MLE G + +  T
Sbjct: 386 KKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNAST 445

Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFV 470
           Y  LI GFC+  +M+  K LL  M   G      +Y+ L+  +C K   +   +L+DE +
Sbjct: 446 YNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEML 505

Query: 471 SRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPK 530
            +GL      Y  L+  +C +  +  A  L   M+  G   + V Y  L   Y R G+ +
Sbjct: 506 DKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLE 565

Query: 531 ACSDILDDMYRRRLMITLKIYR 552
             + +L++M  + L+     Y 
Sbjct: 566 DANGLLNEMLEKGLIPNRTTYE 587



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 126/427 (29%), Positives = 215/427 (50%), Gaps = 30/427 (7%)

Query: 74  YKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALR----DFLSTPSVLNALVKIHDDPDGN 129
           YK S+ S   ++  L K   F   + + +++  R    + ++  +V+N L K+       
Sbjct: 191 YKLSVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVG------ 244

Query: 130 SHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWK--- 186
                         K+ + G  V D M+V    P++     L++   K      ++K   
Sbjct: 245 --------------KLNKAG-DVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADA 289

Query: 187 VYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYC 246
           + K+MV+  V  N   +NVLI   CK  ++    K+  EM+ + ++  + TYN+L+   C
Sbjct: 290 ILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLC 349

Query: 247 KKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHV 304
            +G   EA  + D M    + P+++TYN+LI+G+C++  + EAR LF +I  +G TPN +
Sbjct: 350 NEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVI 409

Query: 305 TYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM 364
           T+ TL+ GYC+   +EEA  L++VM  KG  P   TYN ++   C+EG++ +   LLNEM
Sbjct: 410 TFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEM 469

Query: 365 NEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEM 424
             + +  D VT N LI+A+C+  +   A ++ + ML+ GL     TY  L++G+C    +
Sbjct: 470 QCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNL 529

Query: 425 DIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRAL 484
             A  L   M   G   +  +Y+ L+ GYC K   E    LL+E + +GL  + + Y  +
Sbjct: 530 RAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEII 589

Query: 485 IRRFCKK 491
                +K
Sbjct: 590 KEEMMEK 596



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 86/305 (28%), Positives = 149/305 (48%), Gaps = 19/305 (6%)

Query: 54  CHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTP 113
           C   +LS A   + E      K ++ ++ ++++ L        A+ +L+++   +     
Sbjct: 314 CKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNV 373

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
              NAL+      +G           Y   K+ ++  ++FD +    L P++     LL+
Sbjct: 374 ITYNALI------NG-----------YCKKKLLEEARELFDNIGKQGLTPNVITFNTLLH 416

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
              K    +  + + K M++ G + N   YN LI   C+   +++V+ LL EM+ + V+A
Sbjct: 417 GYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKA 476

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           D  TYN LI+ +C+K    +A  + D M  +G+ P  +TYN L++G+C EG +R A  L 
Sbjct: 477 DTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLR 536

Query: 294 RDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
           + ++  G   N VTY  LI GYCR   LE+A  L   M  KG+ P   TY  I  ++ ++
Sbjct: 537 KQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKEEMMEK 596

Query: 352 GRIRD 356
           G + D
Sbjct: 597 GFLPD 601


>gi|296081012|emb|CBI18516.3| unnamed protein product [Vitis vinifera]
          Length = 967

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 150/546 (27%), Positives = 252/546 (46%), Gaps = 63/546 (11%)

Query: 59  LSCAFFKWA-ESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLN 117
           L+  F KW  +      KH    +    HIL K + + SA+++L  +     + + S+  
Sbjct: 92  LALKFLKWVIKQPGLELKHLTHMYCLTAHILVKARMYDSAKSILRHLCQMG-IGSKSIFG 150

Query: 118 ALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAK 177
           AL+  +   +    V   L+  Y    M    ++ F+ + +    P ++ C ++L S+ K
Sbjct: 151 ALMDTYPLCNSIPSVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVK 210

Query: 178 DRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFT 237
           D+ T++VW ++++M   G+  N+  +N+LI+  C   ++ K   LL +ME       + T
Sbjct: 211 DKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVT 270

Query: 238 YNTLIALYCKKGMHYEALAVQD-----------------------------------RME 262
           YNTL+  YCKKG +  A+ + D                                   +M 
Sbjct: 271 YNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMR 330

Query: 263 REGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLE 320
           +E ISP+ VTYN+LI+GF +EG++  A ++F ++     +PN VTY  LI G+C   D E
Sbjct: 331 KEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFE 390

Query: 321 EALRLREVMAAKG--------------VYPGV---------VTYNSILRKLCKEGRIRDA 357
           EALRL + M A G              VY  +          T N ++  LC++G++ +A
Sbjct: 391 EALRLLDHMEAAGLRLNEHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEA 450

Query: 358 NRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHG 417
            + L  M+   + P+++T + +IN Y  IGD  +A    + M++ G     FTY +L+ G
Sbjct: 451 EKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKG 510

Query: 418 FCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVD 477
            CK   +  AK+ L  +     +     Y+ L+   C   N    + L D+ V   +  D
Sbjct: 511 LCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPD 570

Query: 478 VSVYRALIRRFCKKEKVDYAQRLFNLMQGNGIL-GDSVIYTSLAYAYWRAGEPKACSDIL 536
              Y +L+   C+K K   A  LF    G G L  + V+YT L     +AG PKA     
Sbjct: 571 SYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFF 630

Query: 537 DDMYRR 542
           ++M ++
Sbjct: 631 EEMMKK 636



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 116/461 (25%), Positives = 201/461 (43%), Gaps = 57/461 (12%)

Query: 185 WKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIAL 244
           +  +  M++ G   +   Y  L+   CK  ++ + +K L  + +     D   YNTL+A 
Sbjct: 486 FSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAE 545

Query: 245 YCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGAT---P 301
            CK G  +EA+A+ D+M +  + PD  TY+SL+ G CR+G+   A  LF    G     P
Sbjct: 546 TCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFP 605

Query: 302 NHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLL 361
           NHV YT L+DG  +A   + A    E M  KG  P  V +N+I+    + G++  AN   
Sbjct: 606 NHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFF 665

Query: 362 NEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKA 421
           + M    + P+  T N L++ + K       + + + M+  G+  D+ T+ +LI G  K+
Sbjct: 666 STMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKS 725

Query: 422 KEMDIAKEL------------LFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEF 469
              D+  +L            L  ML+ G  P +  Y  L++G C   + +   KL DE 
Sbjct: 726 GIPDLGVKLLGKMIMEESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEM 785

Query: 470 VSRG-----------------------------------LCVDVSVYRALIRRFCKKEKV 494
            + G                                   L   ++ +  L+ RFC+  K+
Sbjct: 786 EALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKI 845

Query: 495 DYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSF 554
             A +L  +M+  G+  D V Y  L       G+  A  ++ ++M  R L   +  Y   
Sbjct: 846 AEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVL 905

Query: 555 SASYAKDNEIL--DLFWSHVVDRGLMS-----KHIFKEMQL 588
             + +  N ++  +   + + +RGL+S     +H+ KE+ +
Sbjct: 906 VDAISAANNLIQGEKLLTDLQERGLISWGGSTQHLDKELTV 946



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 97/328 (29%), Positives = 153/328 (46%), Gaps = 14/328 (4%)

Query: 161 LMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVE 220
           L P+    T L++ L+K       +  +++M++ G   +   +N +I +C +   + K  
Sbjct: 603 LFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKAN 662

Query: 221 KLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGF 280
                M +  V  +L TYN L+  + KK      L++   M REGI PD +T++SLI G 
Sbjct: 663 DFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGL 722

Query: 281 CREGR------------MREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLR 326
            + G             M E+  +  ++   G  P H  Y TLI+G CR  D++ A +L+
Sbjct: 723 SKSGIPDLGVKLLGKMIMEESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLK 782

Query: 327 EVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKI 386
           + M A G     V  ++++R L   G+  DA  +L+ M   ++ P   T  TL++ +C+ 
Sbjct: 783 DEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRD 842

Query: 387 GDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSY 446
              A A+K+K  M   GL LD   Y  LI G C   +   A EL   M      P+  +Y
Sbjct: 843 AKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTY 902

Query: 447 SWLVDGYCNKNNEEALLKLLDEFVSRGL 474
           + LVD     NN     KLL +   RGL
Sbjct: 903 AVLVDAISAANNLIQGEKLLTDLQERGL 930



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 103/467 (22%), Positives = 181/467 (38%), Gaps = 85/467 (18%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           NS     ++  Y ++    +    FD M      P       LL  L K        K  
Sbjct: 465 NSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFL 524

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
            ++  +    +  +YN L+   CKS ++ +   L  +M   +V  D +TY++L+   C+K
Sbjct: 525 NRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRK 584

Query: 249 GMHYEALAVQ------------------------------------DRMEREGISPDIVT 272
           G    A+ +                                     + M ++G  PD V 
Sbjct: 585 GKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVA 644

Query: 273 YNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMA 330
           +N++I    R G+M +A   F  ++  G  PN  TY  L+ G+ +   L   L L   M 
Sbjct: 645 FNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMM 704

Query: 331 AKGVYPGVVTYNSILRKLCKEGR------------IRDANRLLNEMNEKKIAPDNVTCNT 378
            +G++P  +T++S++  L K G             + ++  +L+EM E  + P +    T
Sbjct: 705 REGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEESTVVLHEMLENGVIPKHAQYIT 764

Query: 379 LINAYCKIGDTASAMKVKNRMLEAG-------------------------LMLDQF---- 409
           LIN  C++GD   A K+K+ M   G                         L+LD      
Sbjct: 765 LINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMR 824

Query: 410 ------TYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALL 463
                 T+  L+H FC+  ++  A +L   M   G      +Y+ L+ G C   +  A  
Sbjct: 825 LLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAF 884

Query: 464 KLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGIL 510
           +L +E   R LC +++ Y  L+        +   ++L   +Q  G++
Sbjct: 885 ELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQERGLI 931



 Score = 49.3 bits (116), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 35/144 (24%), Positives = 60/144 (41%)

Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFV 470
           +  LI  + K   +D A E    +   GF PS  + + ++         E +  L  E  
Sbjct: 166 FDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMS 225

Query: 471 SRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPK 530
            +G+C +V  +  LI   C +  +  A  L   M+ NG +   V Y +L   Y + G  K
Sbjct: 226 DKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYK 285

Query: 531 ACSDILDDMYRRRLMITLKIYRSF 554
           A  +++D M  + +   +  Y  F
Sbjct: 286 AAIELIDYMICKGIEADVCTYNVF 309


>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like isoform 1 [Vitis vinifera]
          Length = 610

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 143/483 (29%), Positives = 232/483 (48%), Gaps = 44/483 (9%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           +DG +  + M     +P +  CT L+    +   T     V + + Q G V ++  YNVL
Sbjct: 131 EDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVL 190

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           I   CKS ++D   ++L  M   +V  D+ TYNT++   C  G   +A+ V DR  ++  
Sbjct: 191 ISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKEC 247

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
            PD++TY  LI   C+E  + +A +L  ++  KG+ P+ VTY  LI+G C+   L+EA++
Sbjct: 248 YPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIK 307

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
               M + G  P V+T+N ILR +C  GR  DA +LL++M  K  +P  VT N LIN  C
Sbjct: 308 FLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLC 367

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEM-------------------- 424
           + G    A+ +  +M   G   +  +Y  L+HGFCK K+M                    
Sbjct: 368 RQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIV 427

Query: 425 ---------------DIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEF 469
                          D+A E+L  +   G SP   +Y+ ++DG       E  +KLLDE 
Sbjct: 428 TYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEM 487

Query: 470 VSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEP 529
             +GL  D+  Y +L+    ++ KVD A + F+ ++G GI  +++ Y S+     ++ + 
Sbjct: 488 RRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQT 547

Query: 530 KACSDILDDMYRRRLMITLKIYRSFSASYAKDN---EILDLFWSHVVDRGLMSKHIFKEM 586
               D L  M  +R   T   Y       A +    E LDL  + +  RGL+ K   +++
Sbjct: 548 DRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLL-NELCSRGLVKKSSAEQV 606

Query: 587 QLR 589
            ++
Sbjct: 607 AVK 609


>gi|4038037|gb|AAC97219.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1107

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 139/481 (28%), Positives = 234/481 (48%), Gaps = 39/481 (8%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHV 132
            +KHS++S+  + HIL   + +  A ++L+++ L    +   V + L    +       V
Sbjct: 5   GFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSK--ADCDVFDVLWSTRNVCVPGFGV 62

Query: 133 LSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMV 192
              L     +L M ++ +Q F +M+   + P   +C                        
Sbjct: 63  FDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSC------------------------ 98

Query: 193 QLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHY 252
                      N L+H   K    D V++   +M     R  +FTYN +I   CK+G   
Sbjct: 99  -----------NGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVE 147

Query: 253 EALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKG--ATPNHVTYTTLI 310
            A  + + M+  G+ PD VTYNS+I GF + GR+ +    F ++K     P+ +TY  LI
Sbjct: 148 AARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALI 207

Query: 311 DGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIA 370
           + +C+   L   L     M   G+ P VV+Y++++   CKEG ++ A +   +M    + 
Sbjct: 208 NCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLV 267

Query: 371 PDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL 430
           P+  T  +LI+A CKIG+ + A ++ N ML+ G+  +  TY ALI G C A+ M  A+EL
Sbjct: 268 PNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEEL 327

Query: 431 LFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCK 490
              M  AG  P+  SY+ L+ G+    N +  L+LL+E   RG+  D+ +Y   I   C 
Sbjct: 328 FGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCS 387

Query: 491 KEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKI 550
            EK++ A+ + N M+  GI  +S+IYT+L  AY+++G P     +LD+M    + +T+  
Sbjct: 388 LEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVT 447

Query: 551 Y 551
           +
Sbjct: 448 F 448



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 118/459 (25%), Positives = 212/459 (46%), Gaps = 20/459 (4%)

Query: 84  MIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANL 143
           MI  + K    ++A+ + E++  R  +      N+++      DG           +  +
Sbjct: 136 MIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMI------DG-----------FGKV 178

Query: 144 KMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLY 203
               D +  F++M+     P +     L+N   K     +  + Y++M   G+  N+  Y
Sbjct: 179 GRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSY 238

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER 263
           + L+ A CK   + +  K   +M    +  + +TY +LI   CK G   +A  + + M +
Sbjct: 239 STLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQ 298

Query: 264 EGISPDIVTYNSLIHGFCREGRMREARRLFR--DIKGATPNHVTYTTLIDGYCRANDLEE 321
            G+  ++VTY +LI G C   RM+EA  LF   D  G  PN  +Y  LI G+ +A +++ 
Sbjct: 299 VGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDR 358

Query: 322 ALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
           AL L   +  +G+ P ++ Y + +  LC   +I  A  ++NEM E  I  +++   TL++
Sbjct: 359 ALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMD 418

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGML-DAGFS 440
           AY K G+    + + + M E  + +   T+  LI G CK K +  A +    +  D G  
Sbjct: 419 AYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQ 478

Query: 441 PSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRL 500
            +   ++ ++DG C  N  EA   L ++ V +GL  D + Y +L+    K+  V  A  L
Sbjct: 479 ANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALAL 538

Query: 501 FNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
            + M   G+  D + YTSL +      + +     L++M
Sbjct: 539 RDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEM 577



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 94/319 (29%), Positives = 154/319 (48%), Gaps = 2/319 (0%)

Query: 238 YNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI- 296
           ++ L ++    GM  EA+    +M+R  + P   + N L+H F + G+  + +R F+D+ 
Sbjct: 63  FDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMI 122

Query: 297 -KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIR 355
             GA P   TY  +ID  C+  D+E A  L E M  +G+ P  VTYNS++    K GR+ 
Sbjct: 123 GAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLD 182

Query: 356 DANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALI 415
           D      EM +    PD +T N LIN +CK G     ++    M   GL  +  +Y  L+
Sbjct: 183 DTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLV 242

Query: 416 HGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLC 475
             FCK   M  A +    M   G  P+  +Y+ L+D  C   N     +L +E +  G+ 
Sbjct: 243 DAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVE 302

Query: 476 VDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDI 535
            +V  Y ALI   C  E++  A+ LF  M   G++ +   Y +L + + +A       ++
Sbjct: 303 WNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALEL 362

Query: 536 LDDMYRRRLMITLKIYRSF 554
           L+++  R +   L +Y +F
Sbjct: 363 LNELKGRGIKPDLLLYGTF 381



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 96/370 (25%), Positives = 174/370 (47%), Gaps = 9/370 (2%)

Query: 134 SWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAK-DRLTDMVWKVYKKMV 192
           S LV  +    M Q  ++ +  MR   L+P+ +  T L+++  K   L+D  +++  +M+
Sbjct: 239 STLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSD-AFRLGNEML 297

Query: 193 QLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHY 252
           Q+GV  N+  Y  LI   C +  + + E+L  +M+   V  +L +YN LI  + K     
Sbjct: 298 QVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMD 357

Query: 253 EALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLI 310
            AL + + ++  GI PD++ Y + I G C   ++  A+ +  ++K  G   N + YTTL+
Sbjct: 358 RALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLM 417

Query: 311 DGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM-NEKKI 369
           D Y ++ +  E L L + M    +   VVT+  ++  LCK   +  A    N + N+  +
Sbjct: 418 DAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGL 477

Query: 370 APDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKE 429
             +      +I+  CK     +A  +  +M++ GL+ D+  Y +L+ G  K   +  A  
Sbjct: 478 QANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALA 537

Query: 430 LLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVD----VSVYRALI 485
           L   M + G      +Y+ LV G  + N  +     L+E +  G+  D    +SV +   
Sbjct: 538 LRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHY 597

Query: 486 RRFCKKEKVD 495
              C  E V+
Sbjct: 598 ELGCIDEAVE 607



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 82/355 (23%), Positives = 163/355 (45%), Gaps = 20/355 (5%)

Query: 54  CHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTP 113
           C I +LS AF    E      + ++ ++  +I  L   +  K A+ +  K+     +   
Sbjct: 281 CKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNL 340

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           +  NAL  IH                +   K     L++ ++++   + P L      + 
Sbjct: 341 ASYNAL--IHG---------------FVKAKNMDRALELLNELKGRGIKPDLLLYGTFIW 383

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
            L      +    V  +M + G+ AN  +Y  L+ A  KS +  +   LL EM+  D+  
Sbjct: 384 GLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEV 443

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMERE-GISPDIVTYNSLIHGFCREGRMREARRL 292
            + T+  LI   CK  +  +A+   +R+  + G+  +   + ++I G C++ ++  A  L
Sbjct: 444 TVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTL 503

Query: 293 FRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
           F  +  KG  P+   YT+L+DG  +  ++ EAL LR+ MA  G+   ++ Y S++  L  
Sbjct: 504 FEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSH 563

Query: 351 EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLM 405
             +++ A   L EM  + I PD V C +++  + ++G    A+++++ +++  L+
Sbjct: 564 CNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMKHQLL 618



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/233 (25%), Positives = 103/233 (44%)

Query: 336 PGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKV 395
           PG   ++++   L   G + +A +  ++M   ++ P   +CN L++ + K+G T    + 
Sbjct: 58  PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 117

Query: 396 KNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCN 455
              M+ AG     FTY  +I   CK  +++ A+ L   M   G  P   +Y+ ++DG+  
Sbjct: 118 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 177

Query: 456 KNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVI 515
               +  +   +E        DV  Y ALI  FCK  K+      +  M+GNG+  + V 
Sbjct: 178 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 237

Query: 516 YTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLF 568
           Y++L  A+ + G  +       DM R  L+     Y S   +  K   + D F
Sbjct: 238 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAF 290


>gi|297793055|ref|XP_002864412.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297310247|gb|EFH40671.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1245

 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 145/545 (26%), Positives = 241/545 (44%), Gaps = 39/545 (7%)

Query: 59  LSCAFFKWA-ESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLN 117
           L+  F KW  +    +  H +Q      HIL + + +  A+++L++++L    S+  V  
Sbjct: 52  LALKFLKWVVKQPGLDTDHIVQLFCITTHILVRARMYDPARHILKELSLMSGKSS-FVFG 110

Query: 118 ALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAK 177
           AL+  +   + N  V   L+  Y    M QD L++F  M ++   P ++ C  +L S+ K
Sbjct: 111 ALMATYRLCNSNPSVFDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSIVK 170

Query: 178 DRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFT 237
                 VW   K+M++  +  ++  +N+LI+  C      K   L+ +ME       + T
Sbjct: 171 SCEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVT 230

Query: 238 YNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK 297
           YNT++  YCKKG    A+ + D M  +G++ D+ TYN LIH  CR  R  +   L RD++
Sbjct: 231 YNTVLHWYCKKGRFKAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMR 290

Query: 298 -------------------------------------GATPNHVTYTTLIDGYCRANDLE 320
                                                G +PNHVT+  LIDG+    + +
Sbjct: 291 KRMIHPNEVTYNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFK 350

Query: 321 EALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLI 380
           EAL++  +M AKG+    V+Y  +L  LCK      A      M    +    +T   +I
Sbjct: 351 EALKMFHMMEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMI 410

Query: 381 NAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFS 440
           +  CK G    A+ + N M + G+  D  TY ALI+GFC+   +  AKE++  +   G S
Sbjct: 411 DGLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLS 470

Query: 441 PSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRL 500
           P+   YS L+   C     +  +++ +  +  G   D   +  L+   CK  KV  A+  
Sbjct: 471 PNGIIYSTLIYNCCRMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEF 530

Query: 501 FNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAK 560
              M  +GIL ++V +  L   Y  +GE      + D+M +     T   Y S      K
Sbjct: 531 MRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCK 590

Query: 561 DNEIL 565
              ++
Sbjct: 591 GGHLI 595



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 104/421 (24%), Positives = 189/421 (44%), Gaps = 39/421 (9%)

Query: 195 GVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEA 254
           GV A++  YN+LIH  C+S+   K   LL +M  + +  +  TYNTL+  +  +G    A
Sbjct: 258 GVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPNEVTYNTLLNGFSNEGKVLIA 317

Query: 255 LAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK----------------- 297
             + + M   G+SP+ VT+N+LI G   EG  +EA ++F  ++                 
Sbjct: 318 RQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMFHMMEAKGLIGTEVSYGVLLDG 377

Query: 298 --------------------GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPG 337
                               G     +TYT +IDG C+   L+EA+ +   M+  G+ P 
Sbjct: 378 LCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVMLNEMSKDGIDPD 437

Query: 338 VVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKN 397
           +VTY++++   C+ GR++ A  ++  +    ++P+ +  +TLI   C++G     +++  
Sbjct: 438 IVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKETIRIYE 497

Query: 398 RMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKN 457
            M+  G   D FT+  L+   CKA ++  A+E +  M   G  P+  S+  L++GY +  
Sbjct: 498 AMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNAVSFDCLINGYGSSG 557

Query: 458 NEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYT 517
                  + DE    G       Y +L++  CK   +  A++    +Q      D+V+  
Sbjct: 558 EGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQNVPAAVDTVMCN 617

Query: 518 SLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNE--ILDLFWSHVVDR 575
           +L  A  ++G       +  +M +R ++     Y S  +   +  +  I  LF      R
Sbjct: 618 TLITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTVIAILFAKEAEAR 677

Query: 576 G 576
           G
Sbjct: 678 G 678



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 90/392 (22%), Positives = 172/392 (43%), Gaps = 3/392 (0%)

Query: 156 MRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSD 215
           M    ++P+  +   L+N           + V+ +M ++G       Y  L+   CK   
Sbjct: 534 MTSDGILPNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGH 593

Query: 216 VDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNS 275
           +   EK L  ++      D    NTLI   CK G   +A+++   M +  I PD  TY S
Sbjct: 594 LIAAEKFLKSLQNVPAAVDTVMCNTLITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTS 653

Query: 276 LIHGFCREGRMREARRLFRDIKGA---TPNHVTYTTLIDGYCRANDLEEALRLREVMAAK 332
           LI G CR+G+   A    ++ +      PN V YT  +DG  +A   +     R+ M   
Sbjct: 654 LISGLCRKGKTVIAILFAKEAEARGNLVPNKVMYTCFVDGMFKAGQWKAGFYFRQQMDKL 713

Query: 333 GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
           G+   VVT N+++    + G+I   + LL EM  +   P+  T N L++ Y K    +++
Sbjct: 714 GLTRDVVTTNAMIDGYSRMGKIEKTHDLLFEMGNQNQGPNLTTYNILLHGYSKRKHVSTS 773

Query: 393 MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
             +   M+ +G++ D+ T  ++I G C++  ++I  ++L   +  G      +++ L+  
Sbjct: 774 FMLYRSMILSGILPDKLTCYSIILGICESNMLEIGLKILKAFICRGVEVDRHTFNMLISK 833

Query: 453 YCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGD 512
            C          +++   S G+ +D +   A++    +  +   ++ + + M   GI  +
Sbjct: 834 CCANGEINWAFDMVNVMTSLGISLDKNTCDAIVSVLNRNHRFQESRMVLHEMSKQGISPE 893

Query: 513 SVIYTSLAYAYWRAGEPKACSDILDDMYRRRL 544
           S  Y  L     R G+ K    + ++M   ++
Sbjct: 894 SRKYIGLLNGLCRVGDIKTAFVVKEEMIAHKI 925



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 91/328 (27%), Positives = 162/328 (49%), Gaps = 3/328 (0%)

Query: 155  QMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSS 214
            +M   N  P+L    +LL+  +K +     + +Y+ M+  G++ +      +I   C+S+
Sbjct: 744  EMGNQNQGPNLTTYNILLHGYSKRKHVSTSFMLYRSMILSGILPDKLTCYSIILGICESN 803

Query: 215  DVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYN 274
             ++   K+L     + V  D  T+N LI+  C  G    A  + + M   GIS D  T +
Sbjct: 804  MLEIGLKILKAFICRGVEVDRHTFNMLISKCCANGEINWAFDMVNVMTSLGISLDKNTCD 863

Query: 275  SLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAK 332
            +++    R  R +E+R +  ++  +G +P    Y  L++G CR  D++ A  ++E M A 
Sbjct: 864  AIVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLLNGLCRVGDIKTAFVVKEEMIAH 923

Query: 333  GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
             + P  V  ++++R L K G+  +A+ LL  M + K+ P   +  TL++ +CK G+   A
Sbjct: 924  KICPPNVAESAMVRALAKCGKADEASLLLRSMLKMKLVPTIASFTTLMHLFCKNGNVTEA 983

Query: 393  MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
            ++++  M   GL LD  +Y  LI G C   +M IA EL   M   GF  +  +Y  LV G
Sbjct: 984  LELRVVMSNCGLKLDLVSYNVLITGLCAKGDMAIAFELFEEMKRDGFLANVTTYKALVGG 1043

Query: 453  YCNKNNE-EALLKLLDEFVSRGLCVDVS 479
              ++  E      +L + ++RG    +S
Sbjct: 1044 ILSQGTEFSGTDIILKDLLARGFITAMS 1071



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 96/392 (24%), Positives = 176/392 (44%), Gaps = 3/392 (0%)

Query: 160  NLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKV 219
            NL+P+    T  ++ + K       +   ++M +LG+  ++   N +I    +   ++K 
Sbjct: 679  NLVPNKVMYTCFVDGMFKAGQWKAGFYFRQQMDKLGLTRDVVTTNAMIDGYSRMGKIEKT 738

Query: 220  EKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHG 279
              LL EM  ++   +L TYN L+  Y K+     +  +   M   GI PD +T  S+I G
Sbjct: 739  HDLLFEMGNQNQGPNLTTYNILLHGYSKRKHVSTSFMLYRSMILSGILPDKLTCYSIILG 798

Query: 280  FCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPG 337
             C    +    ++ +    +G   +  T+  LI   C   ++  A  +  VM + G+   
Sbjct: 799  ICESNMLEIGLKILKAFICRGVEVDRHTFNMLISKCCANGEINWAFDMVNVMTSLGISLD 858

Query: 338  VVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKN 397
              T ++I+  L +  R +++  +L+EM+++ I+P++     L+N  C++GD  +A  VK 
Sbjct: 859  KNTCDAIVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLLNGLCRVGDIKTAFVVKE 918

Query: 398  RMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKN 457
             M+   +        A++    K  + D A  LL  ML     P+  S++ L+  +C   
Sbjct: 919  EMIAHKICPPNVAESAMVRALAKCGKADEASLLLRSMLKMKLVPTIASFTTLMHLFCKNG 978

Query: 458  NEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYT 517
            N    L+L     + GL +D+  Y  LI   C K  +  A  LF  M+ +G L +   Y 
Sbjct: 979  NVTEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMAIAFELFEEMKRDGFLANVTTYK 1038

Query: 518  SLAYAYWRAGEPKACSD-ILDDMYRRRLMITL 548
            +L       G   + +D IL D+  R  +  +
Sbjct: 1039 ALVGGILSQGTEFSGTDIILKDLLARGFITAM 1070



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 72/350 (20%), Positives = 144/350 (41%), Gaps = 52/350 (14%)

Query: 98   QNMLEKIAL-RDFLSTPSVLNA------LVKIHD--------DPDGNSHVLSWLVIFYAN 142
            +  ++K+ L RD ++T ++++       + K HD        +   N    + L+  Y+ 
Sbjct: 707  RQQMDKLGLTRDVVTTNAMIDGYSRMGKIEKTHDLLFEMGNQNQGPNLTTYNILLHGYSK 766

Query: 143  LKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHL 202
             K       ++  M +  ++P    C  ++  + +  + ++  K+ K  +  GV  + H 
Sbjct: 767  RKHVSTSFMLYRSMILSGILPDKLTCYSIILGICESNMLEIGLKILKAFICRGVEVDRHT 826

Query: 203  YNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRME 262
            +N+LI  CC + +++    ++  M    +  D  T + ++++  +     E+  V   M 
Sbjct: 827  FNMLISKCCANGEINWAFDMVNVMTSLGISLDKNTCDAIVSVLNRNHRFQESRMVLHEMS 886

Query: 263  REGISPDIVTYNSLIHGFCREGRMR----------------------------------- 287
            ++GISP+   Y  L++G CR G ++                                   
Sbjct: 887  KQGISPESRKYIGLLNGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKAD 946

Query: 288  EARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSIL 345
            EA  L R +      P   ++TTL+  +C+  ++ EAL LR VM+  G+   +V+YN ++
Sbjct: 947  EASLLLRSMLKMKLVPTIASFTTLMHLFCKNGNVTEALELRVVMSNCGLKLDLVSYNVLI 1006

Query: 346  RKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKV 395
              LC +G +  A  L  EM       +  T   L+      G   S   +
Sbjct: 1007 TGLCAKGDMAIAFELFEEMKRDGFLANVTTYKALVGGILSQGTEFSGTDI 1056


>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Glycine max]
          Length = 903

 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 138/457 (30%), Positives = 223/457 (48%), Gaps = 14/457 (3%)

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           LV+ +  L+  + G+Q+ D+M      P   A + L++ L K    D  +++  K+ + G
Sbjct: 301 LVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFG 360

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
            V N+ +YN LI++ CK  D+DK E L   M   ++R +  TY+ LI  +C+ G    A+
Sbjct: 361 FVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAI 420

Query: 256 AVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGY 313
           +  DRM ++GI   +  YNSLI+G C+ G +  A  LF ++  KG  P   T+T+LI GY
Sbjct: 421 SYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGY 480

Query: 314 CRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDN 373
           C+   +++A +L   M   G+ P V T+ +++  LC   ++ +A+ L +E+ E+KI P  
Sbjct: 481 CKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTE 540

Query: 374 VTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFG 433
           VT N LI  YC+ G    A ++   M + GL+ D +TY+ LI G C    +  AK+ +  
Sbjct: 541 VTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDD 600

Query: 434 MLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEK 493
           +       +   YS L+ GYC +      L    E + RG+ +D+  +  LI    K+  
Sbjct: 601 LHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPD 660

Query: 494 VDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRS 553
                 L   M   G+  D+VIYTS+   Y + G  K   +  D M        +  Y +
Sbjct: 661 RKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTA 720

Query: 554 FSASYAKDNEILDLFWSHVVDRGLMSKHIFKEMQLRN 590
                 K  E+         DR  +   +FK MQ  N
Sbjct: 721 LMNGLCKAGEM---------DRAGL---LFKRMQAAN 745



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 143/550 (26%), Positives = 264/550 (48%), Gaps = 12/550 (2%)

Query: 9   SDTKFIKTISAIML-KGHWAKLLN-PNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKW 66
           +D +F+  +  I+  K  W    N  +I+S+L    + +VL+N  +      L+  FF +
Sbjct: 36  NDCRFVSLLCDIVRGKQSWKVAFNDASISSTLRPHHVEQVLMNTLD---DAKLALRFFNF 92

Query: 67  AESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS-VLNALVKIHDD 125
                 N  HS  S+  M+H L  ++ F  A ++L  + LR+  S P  V +  +  +  
Sbjct: 93  L-GLHKNMNHSTTSYAIMVHALVHSRLFWPANSLLHTLLLRE--SHPKCVFSHFLDSYKR 149

Query: 126 PDGNSHV-LSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMV 184
              +S +  + LV  Y       D + +   M  +NL+P +   + LLN L K R    V
Sbjct: 150 CKFSSTLGFNLLVQNYVLSSRIFDAVVIVKLMFANNLLPEVRTLSALLNGLLKVRKFITV 209

Query: 185 WKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIAL 244
           W+++ + V  GV  + +  + ++ + C+  D  + ++ +  ME       + TYN LI  
Sbjct: 210 WELFDESVNAGVRPDPYTCSAVVRSMCELKDFLRAKEKIRWMEANGFDLSIVTYNVLIHG 269

Query: 245 YCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPN 302
            CK     EA+ V+  +  +G++ D+VTY +L+ GFCR  +     +L  ++   G +P 
Sbjct: 270 LCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPT 329

Query: 303 HVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLN 362
               + L+DG  +   +++A  L   +   G  P +  YN+++  LCK G +  A  L +
Sbjct: 330 EAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYS 389

Query: 363 EMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAK 422
            M+   + P+ +T + LI+++C+ G    A+   +RM++ G+    + Y +LI+G CK  
Sbjct: 390 NMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFG 449

Query: 423 EMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYR 482
           ++  A+ L   M + G  P+  +++ L+ GYC     +   KL ++ +  G+  +V  + 
Sbjct: 450 DLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFT 509

Query: 483 ALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRR 542
           ALI   C   K+  A  LF+ +    I    V Y  L   Y R G+     ++L+DM+++
Sbjct: 510 ALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQK 569

Query: 543 RLMITLKIYR 552
            L+     YR
Sbjct: 570 GLVPDTYTYR 579



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 105/367 (28%), Positives = 184/367 (50%), Gaps = 2/367 (0%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           ++  M + NL P+    ++L++S  +    D+    + +M+Q G+   ++ YN LI+  C
Sbjct: 387 LYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQC 446

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           K  D+   E L  EM  K V     T+ +LI+ YCK     +A  + ++M   GI+P++ 
Sbjct: 447 KFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVY 506

Query: 272 TYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           T+ +LI G C   +M EA  LF ++  +   P  VTY  LI+GYCR   +++A  L E M
Sbjct: 507 TFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDM 566

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
             KG+ P   TY  ++  LC  GR+  A   +++++++ +  + +  + L++ YC+ G  
Sbjct: 567 HQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRL 626

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
             A+     M++ G+ +D   +  LI G  K  +     +LL  M D G  P    Y+ +
Sbjct: 627 MEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSM 686

Query: 450 VDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGI 509
           +D Y  + + +   +  D  V+     +V  Y AL+   CK  ++D A  LF  MQ   +
Sbjct: 687 IDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANV 746

Query: 510 LGDSVIY 516
             +S+ Y
Sbjct: 747 PPNSITY 753



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 105/387 (27%), Positives = 192/387 (49%), Gaps = 3/387 (0%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N +  + L+    +     +  ++FD++    + P      VL+    +D   D  +++ 
Sbjct: 504 NVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELL 563

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
           + M Q G+V + + Y  LI   C +  V K +  + ++  ++V+ +   Y+ L+  YC++
Sbjct: 564 EDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQE 623

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTY 306
           G   EAL+    M + GI+ D+V +  LI G  ++   +    L +D+  +G  P++V Y
Sbjct: 624 GRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIY 683

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
           T++ID Y +    ++A    ++M  +  +P VVTY +++  LCK G +  A  L   M  
Sbjct: 684 TSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQA 743

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
             + P+++T    ++   K G+   A+ + + ML+ GL+ +  T+  +I GFCK      
Sbjct: 744 ANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAMLK-GLLANTVTHNIIIRGFCKLGRFHE 802

Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
           A ++L  M + G  P   +YS L+  YC   N  A +KL D  ++RGL  D+  Y  LI 
Sbjct: 803 ATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLNRGLEPDLVAYNLLIY 862

Query: 487 RFCKKEKVDYAQRLFNLMQGNGILGDS 513
             C   ++D A  L + M   GI+ D+
Sbjct: 863 GCCVNGELDKAFELRDDMLRRGIIPDN 889



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 47/230 (20%), Positives = 99/230 (43%)

Query: 335 YPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMK 394
           +   + +N +++      RI DA  ++  M    + P+  T + L+N   K+    +  +
Sbjct: 152 FSSTLGFNLLVQNYVLSSRIFDAVVIVKLMFANNLLPEVRTLSALLNGLLKVRKFITVWE 211

Query: 395 VKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYC 454
           + +  + AG+  D +T  A++   C+ K+   AKE +  M   GF  S  +Y+ L+ G C
Sbjct: 212 LFDESVNAGVRPDPYTCSAVVRSMCELKDFLRAKEKIRWMEANGFDLSIVTYNVLIHGLC 271

Query: 455 NKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSV 514
             +     +++      +GL  DV  Y  L+  FC+ ++ +   +L + M   G      
Sbjct: 272 KGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEA 331

Query: 515 IYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
             + L     + G+     +++  + R   +  L +Y +   S  K  ++
Sbjct: 332 AVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDL 381


>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
          Length = 826

 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 134/454 (29%), Positives = 228/454 (50%), Gaps = 22/454 (4%)

Query: 83  TMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYAN 142
           ++I    K    + A+ +LE++  R F   P     ++              WL +   N
Sbjct: 391 SIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIH-------------WLCM---N 434

Query: 143 LKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHL 202
            +  +  L+   +M + N+ P+    T L+  L K+       +++ ++++ G  AN+  
Sbjct: 435 SRF-ESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVT 493

Query: 203 YNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRME 262
            N LIH  CK+ ++ +  +LL +M  +    D  TYNTLI+  CK+G   E   ++  M 
Sbjct: 494 TNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMV 553

Query: 263 REGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGA--TPNHVTYTTLIDGYCRANDLE 320
           ++GI PD  TYN LIHG CR G++ EA  L+ + K     PN  TY  +IDGYC+A+ +E
Sbjct: 554 KQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIE 613

Query: 321 EALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLI 380
           E  +L   +  + +    V YN+++R  C+ G   +A +L ++M  K I P   T ++LI
Sbjct: 614 EGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLI 673

Query: 381 NAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFS 440
           +  C IG    A  + + M + GL+ +   Y ALI G+CK  +MD    +L  M      
Sbjct: 674 HGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIH 733

Query: 441 PSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRL 500
           P+  +Y+ ++DGY    + +   KLL E V +G+  D   Y  L   FCK+ K++   ++
Sbjct: 734 PNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKI 793

Query: 501 FNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSD 534
            + M   G+  D + YT+L +  W+  +P A ++
Sbjct: 794 CDYMSQEGLPLDEITYTTLVHG-WQ--QPSALTN 824



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 163/620 (26%), Positives = 286/620 (46%), Gaps = 65/620 (10%)

Query: 8   NSDTKFIKTISAIM----LKGHWAKLLNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAF 63
           +SD   +K++++I+    L     K L P+++     +    V  N+      P  +  F
Sbjct: 44  SSDHALLKSVTSILSNPSLDSTQCKQLIPHLSPHQFDSVFFSVRRNVN-----PKTALNF 98

Query: 64  FKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDF---LSTP-----SV 115
           F +A  +   ++ +L+S+  ++  L  +     A+ +L ++  R        P      +
Sbjct: 99  FYFASDSC-GFRFTLRSYCVLMRSLIVSGFVSPARLLLIRLIDRKLPVLFGDPKNRHIEI 157

Query: 116 LNALVKIHDDPDGNSHVLSWLVIFYANLKMTQ-------DGLQVFDQMRVHNLMPHLHAC 168
            +A+  +++   G S V    V    ++  TQ       + + VF  +    + P +  C
Sbjct: 158 ASAMADLNEV--GESGVAVAAVDLLIHVYCTQFRNVGFRNAIGVFRFLANKGVFPTVKTC 215

Query: 169 TVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEF 228
           T LL+SL K    +  + V++ M Q GV  +++L++  I+A CK   V+   +L  +ME 
Sbjct: 216 TFLLSSLVKANELEKSYWVFETMRQ-GVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEK 274

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
             V  ++ TYN LI   CK G   EA   +++M ++G++  ++TY+ LI+G  +  +  E
Sbjct: 275 LGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNE 334

Query: 289 ARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILR 346
           A  + ++   KG TPN V Y TLIDGYC+  +L +ALR+R  M +KG+ P  VT NSI++
Sbjct: 335 ANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQ 394

Query: 347 KLCKEGRIRDAN-----------------------------------RLLNEMNEKKIAP 371
             CK G++  A                                    R L EM  + + P
Sbjct: 395 GFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRP 454

Query: 372 DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
           ++    TL+   CK G  + A+++  R+LE G   +  T  ALIHG CK   M  A  LL
Sbjct: 455 NDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLL 514

Query: 432 FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
             ML+ GF     +Y+ L+ G C +   E   KL  E V +G+  D   Y  LI   C+ 
Sbjct: 515 KKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRI 574

Query: 492 EKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIY 551
            K+D A  L+N  +   ++ +   Y  +   Y +A + +    +  ++  + L +   +Y
Sbjct: 575 GKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVY 634

Query: 552 RSFSASYAKDNEILDLFWSH 571
            +   +Y ++   ++ F  H
Sbjct: 635 NTLIRAYCRNGNTVEAFKLH 654



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 132/508 (25%), Positives = 234/508 (46%), Gaps = 20/508 (3%)

Query: 64  FKWAESAVPN-YKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKI 122
           F++ E  V +    +L ++  +I+ L K + F  A ++L++   + F     V N L+  
Sbjct: 301 FRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLI-- 358

Query: 123 HDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTD 182
               DG           Y  +    D L++   M    + P+      ++    K    +
Sbjct: 359 ----DG-----------YCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQME 403

Query: 183 MVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLI 242
               + ++M+  G   N   +  +IH  C +S  +   + L EM  +++R +     TL+
Sbjct: 404 QAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLV 463

Query: 243 ALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGAT 300
              CK+G H +A+ +  R+  +G   ++VT N+LIHG C+ G M+EA RL + +  +G  
Sbjct: 464 GGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFV 523

Query: 301 PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRL 360
            + +TY TLI G C+   +EE  +LR  M  +G+ P   TYN ++  +C+ G++ +A  L
Sbjct: 524 LDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNL 583

Query: 361 LNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCK 420
            NE   + + P+  T   +I+ YCK        K+   +L   L L+   Y  LI  +C+
Sbjct: 584 WNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCR 643

Query: 421 AKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSV 480
                 A +L   M   G  P+  +YS L+ G CN    E    L+DE    GL  +V  
Sbjct: 644 NGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVC 703

Query: 481 YRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMY 540
           Y ALI  +CK  ++D    +   M    I  + + YT +   Y ++G+ K  + +L +M 
Sbjct: 704 YTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMV 763

Query: 541 RRRLMITLKIYRSFSASYAKDNEILDLF 568
            + ++     Y   +  + K+ +I + F
Sbjct: 764 GKGIVPDTVTYNVLTNGFCKEGKIEEGF 791


>gi|359472741|ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Vitis vinifera]
          Length = 708

 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 136/488 (27%), Positives = 246/488 (50%), Gaps = 25/488 (5%)

Query: 84  MIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLN---------ALVKIHDD--------- 125
           M+    +N   K A NM+ ++  +  + +   LN          LV+I ++         
Sbjct: 160 MVMNFAENGKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRG 219

Query: 126 --PDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDM 183
             PD  S  L  +V+   N+    +  +  + M     +     CT+++++  +    + 
Sbjct: 220 VSPDCVSFKL--MVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNR 277

Query: 184 VWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIA 243
           V   + KMV++G+  N+  +  LI+  CK   + +  +LL EM  +  + +++T+ TLI 
Sbjct: 278 VVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLID 337

Query: 244 LYCKKGMHYEALAVQDRMER-EGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GAT 300
             CKKG   +A  +  ++ R +G  P++ TY ++I+G+C+E ++  A  L   ++  G  
Sbjct: 338 GLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLV 397

Query: 301 PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRL 360
           PN  TYTTLIDG+C+  +   A  L ++M  +G  P + TYN+I+  LCK+G + +A RL
Sbjct: 398 PNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRL 457

Query: 361 LNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCK 420
           LN+++   +  D VT   L++ +C+  DT  ++   N+ML+ G   D  +Y  LI  FC+
Sbjct: 458 LNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCR 517

Query: 421 AKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSV 480
            K+M  ++ L    +  G  P+  +Y+ ++ GYC   N    +KL     + G   D   
Sbjct: 518 QKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSIT 577

Query: 481 YRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMY 540
           Y ALI   CK+ K+D A+ L++ M   G+    V   +LAY Y +  +     ++LD + 
Sbjct: 578 YGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLE 637

Query: 541 RRRLMITL 548
           +R+ + T+
Sbjct: 638 KRQWIRTV 645



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 108/359 (30%), Positives = 184/359 (51%), Gaps = 6/359 (1%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQL-GVVANIHLYNV 205
           +   ++ ++M      P+++  T L++ L K   T+  ++++ K+V+  G   N+H Y  
Sbjct: 311 KQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTA 370

Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
           +I+  CK   +++ E LL  M+ + +  +  TY TLI  +CK G    A  + D M +EG
Sbjct: 371 MINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEG 430

Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEAL 323
            SP+I TYN++I G C++G + EA RL   +   G   + VTYT L+  +CR  D   +L
Sbjct: 431 FSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSL 490

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
                M   G  P + +Y +++   C++ +++++ RL  E     + P   T  ++I  Y
Sbjct: 491 VFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGY 550

Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY 443
           C+ G+T+ A+K+  RM   G   D  TY ALI G CK  ++D A+ L   M+D G SP  
Sbjct: 551 CRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCE 610

Query: 444 CSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
            +   L   YC K++    + +LD    R     +     L+R+ C + K+D A   F+
Sbjct: 611 VTRLTLAYEYCKKDDSSTAINVLDRLEKRQW---IRTVNTLVRKLCSEGKLDMAALFFH 666



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 114/453 (25%), Positives = 222/453 (49%), Gaps = 5/453 (1%)

Query: 130 SHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYK 189
           + V+  +V+ +A     ++ + +  +M+   L+P       +L+      L ++   ++ 
Sbjct: 154 NEVMQCMVMNFAENGKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFV 213

Query: 190 KMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKG 249
           +M Q GV  +   + +++ ACC    V + E+ L  M  +    D  T   +I  +C+KG
Sbjct: 214 EMCQRGVSPDCVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKG 273

Query: 250 MHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYT 307
                +    +M   G++P+++ + +LI+G C++G +++A  L  ++  +G  PN  T+T
Sbjct: 274 YVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHT 333

Query: 308 TLIDGYCRANDLEEALRL-REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
           TLIDG C+    E+A RL  +++ + G  P V TY +++   CKE ++  A  LL+ M E
Sbjct: 334 TLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQE 393

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
           + + P+  T  TLI+ +CK+G+   A ++ + M + G   + +TY A+I G CK   +D 
Sbjct: 394 QGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDE 453

Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
           A  LL  +   G      +Y+ L+  +C + +    L   ++ +  G   D+  Y  LI 
Sbjct: 454 AYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLIS 513

Query: 487 RFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMI 546
            FC+++++  ++RLF      G++     YTS+   Y R G       +   M       
Sbjct: 514 TFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAP 573

Query: 547 TLKIYRSFSASYAKDNEILDL--FWSHVVDRGL 577
               Y +  +   K++++ D    +  ++D+GL
Sbjct: 574 DSITYGALISGLCKESKLDDARNLYDAMMDKGL 606



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 120/236 (50%), Gaps = 5/236 (2%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           +  ++ +++ VH L       T+L++   +   T+     + KM+++G   +IH Y  LI
Sbjct: 453 EAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLI 512

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
              C+   + + E+L  E     +     TY ++I  YC+ G    A+ +  RM   G +
Sbjct: 513 STFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCA 572

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
           PD +TY +LI G C+E ++ +AR L+  +  KG +P  VT  TL   YC+ +D   A+ +
Sbjct: 573 PDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINV 632

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
            + +  +     + T N+++RKLC EG++  A    +++ +K+   + VT    +N
Sbjct: 633 LDRLEKR---QWIRTVNTLVRKLCSEGKLDMAALFFHKLLDKEPNVNRVTLLGFMN 685


>gi|147798989|emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera]
          Length = 708

 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 136/488 (27%), Positives = 246/488 (50%), Gaps = 25/488 (5%)

Query: 84  MIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLN---------ALVKIHDD--------- 125
           M+    +N   K A NM+ ++  +  + +   LN          LV+I ++         
Sbjct: 160 MVMNFAENGKLKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRG 219

Query: 126 --PDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDM 183
             PD  S  L  +V+   N+    +  +  + M     +     CT+++++  +    + 
Sbjct: 220 VSPDCVSFKL--MVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNR 277

Query: 184 VWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIA 243
           V   + KMV++G+  N+  +  LI+  CK   + +  +LL EM  +  + +++T+ TLI 
Sbjct: 278 VVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLID 337

Query: 244 LYCKKGMHYEALAVQDRMER-EGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GAT 300
             CKKG   +A  +  ++ R +G  P++ TY ++I+G+C+E ++  A  L   ++  G  
Sbjct: 338 GLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLV 397

Query: 301 PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRL 360
           PN  TYTTLIDG+C+  +   A  L ++M  +G  P + TYN+I+  LCK+G + +A RL
Sbjct: 398 PNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRL 457

Query: 361 LNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCK 420
           LN+++   +  D VT   L++ +C+  DT  ++   N+ML+ G   D  +Y  LI  FC+
Sbjct: 458 LNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCR 517

Query: 421 AKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSV 480
            K+M  ++ L    +  G  P+  +Y+ ++ GYC   N    +KL     + G   D   
Sbjct: 518 QKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSIT 577

Query: 481 YRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMY 540
           Y ALI   CK+ K+D A+ L++ M   G+    V   +LAY Y +  +     ++LD + 
Sbjct: 578 YGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLE 637

Query: 541 RRRLMITL 548
           +R+ + T+
Sbjct: 638 KRQWIRTV 645



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 108/359 (30%), Positives = 184/359 (51%), Gaps = 6/359 (1%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQL-GVVANIHLYNV 205
           +   ++ ++M      P+++  T L++ L K   T+  ++++ K+V+  G   N+H Y  
Sbjct: 311 KQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTA 370

Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
           +I+  CK   +++ E LL  M+ + +  +  TY TLI  +CK G    A  + D M +EG
Sbjct: 371 MINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEG 430

Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEAL 323
            SP+I TYN++I G C++G + EA RL   +   G   + VTYT L+  +CR  D   +L
Sbjct: 431 FSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSL 490

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
                M   G  P + +Y +++   C++ +++++ RL  E     + P   T  ++I  Y
Sbjct: 491 VFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGY 550

Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY 443
           C+ G+T+ A+K+  RM   G   D  TY ALI G CK  ++D A+ L   M+D G SP  
Sbjct: 551 CRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCE 610

Query: 444 CSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
            +   L   YC K++    + +LD    R     +     L+R+ C + K+D A   F+
Sbjct: 611 VTRLTLAYEYCKKDDSSTAINVLDRLEKRQW---IRTVNTLVRKLCSEGKLDMAALFFH 666



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 114/453 (25%), Positives = 221/453 (48%), Gaps = 5/453 (1%)

Query: 130 SHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYK 189
           + V+  +V+ +A     ++ + +  +M+   L+        +L+      L ++   ++ 
Sbjct: 154 NEVMQCMVMNFAENGKLKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFV 213

Query: 190 KMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKG 249
           +M Q GV  +   + +++ ACC    V + EK L  M  +    D  T   +I  +C+KG
Sbjct: 214 EMCQRGVSPDCVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKG 273

Query: 250 MHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYT 307
                +    +M   G++P+++ + +LI+G C++G +++A  L  ++  +G  PN  T+T
Sbjct: 274 YVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHT 333

Query: 308 TLIDGYCRANDLEEALRL-REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
           TLIDG C+    E+A RL  +++ + G  P V TY +++   CKE ++  A  LL+ M E
Sbjct: 334 TLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQE 393

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
           + + P+  T  TLI+ +CK+G+   A ++ + M + G   + +TY A+I G CK   +D 
Sbjct: 394 QGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDE 453

Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
           A  LL  +   G      +Y+ L+  +C + +    L   ++ +  G   D+  Y  LI 
Sbjct: 454 AYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLIS 513

Query: 487 RFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMI 546
            FC+++++  ++RLF      G++     YTS+   Y R G       +   M       
Sbjct: 514 XFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAP 573

Query: 547 TLKIYRSFSASYAKDNEILDL--FWSHVVDRGL 577
               Y +  +   K++++ D    +  ++D+GL
Sbjct: 574 DSITYGALISGLCKESKLDDARNLYDAMMDKGL 606



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 93/397 (23%), Positives = 163/397 (41%), Gaps = 85/397 (21%)

Query: 54  CHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTP 113
           C   S+  AF    E     +K ++ +H T+I  L K       +   EK A R FL   
Sbjct: 305 CKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCK-------KGWTEK-AFRLFLK-- 354

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
                LV+  D    N H  + ++  Y           +  +M+   L+P+ +  T L++
Sbjct: 355 -----LVR-SDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLID 408

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
              K       +++   M + G   NI+ YN +I   CK   +D+  +LL ++    ++A
Sbjct: 409 GHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQA 468

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           D  TY  L++++C++     +L   ++M + G +PDI +Y +LI  FCR+ +M+E+ RLF
Sbjct: 469 DGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESERLF 528

Query: 294 RDI-------------------------------------KGATPNHVTYTTLIDGYCRA 316
            +                                       G  P+ +TY  LI G C+ 
Sbjct: 529 EEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKE 588

Query: 317 NDLEEALRLREVMAAKGVYPGVVT--------------------------------YNSI 344
           + L++A  L + M  KG+ P  VT                                 N++
Sbjct: 589 SKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEKRQWIRTVNTL 648

Query: 345 LRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
           +RKLC EG++  A    +++ +K+   + VT    +N
Sbjct: 649 VRKLCSEGKLDMAALFFHKLLDKEPNVNRVTLLGFMN 685


>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 123/395 (31%), Positives = 210/395 (53%), Gaps = 2/395 (0%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
            + + + D+M      P L     ++N L K    D+   + KKM +  + AN+ +YN +
Sbjct: 203 SEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTI 262

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           I   CK   +D    L  +ME K ++ D+FTYN+LI+  C  G   +A  +   M    I
Sbjct: 263 IDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKI 322

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
           +P++VT+NSLI  F +EG++ EA +LF ++  +   PN VTY +LI+G+C  + L+EA +
Sbjct: 323 NPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQ 382

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           +  +M +K   P VVTYN++++  CK  R+ +   L  EM+++ +  + VT NTLI    
Sbjct: 383 IFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLF 442

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           + GD   A K+  +M+  G+  D  TY  L+ G CK  +++ A  +   +  +   P+  
Sbjct: 443 QAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIY 502

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
           +Y+ +++G C     E    L      +G+  +V +Y  +I  FC+K   + A  LF  M
Sbjct: 503 TYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREM 562

Query: 505 QGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
           + +G L DS  Y +L  A  R G+  A ++++ +M
Sbjct: 563 KEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEM 597



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 144/503 (28%), Positives = 247/503 (49%), Gaps = 32/503 (6%)

Query: 34  IASSLTSTA---IHKVLLNLYNCCHI-PSLSCAFFKWAESAVPNYKHSLQSHWTMIHILT 89
           I+ ++ STA   +H+ L+   N   + PSLS  F++ A S   +Y +             
Sbjct: 3   ISFAIASTAKRFVHRSLVVRGNAATVSPSLS-FFWRRAFSGKTSYDY------------- 48

Query: 90  KNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDG 149
                K ++N L ++ L D ++   +   +VK    P     ++ +  +  A  KM +  
Sbjct: 49  ---REKLSRNGLSELKLDDAVA---LFGEMVKSRPFP----SIIEFSKLLSAIAKMNKFD 98

Query: 150 LQVFDQMRVHNL-MPHLH-ACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           + +    ++ NL +PH H   ++LLN   +     +   V  KM++LG   +I   + L+
Sbjct: 99  VVISLGEQMQNLGIPHNHYTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLL 158

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           +  C    + +   L+ +M     + D  T+NTLI          EA+A+ DRM   G  
Sbjct: 159 NGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQ 218

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDIKGA--TPNHVTYTTLIDGYCRANDLEEALRL 325
           PD+ TY ++++G C+ G +  A  L + ++      N V Y T+IDG C+   +++A  L
Sbjct: 219 PDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDL 278

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
              M  KG+ P V TYNS++  LC  GR  DA+RLL++M E+KI P+ VT N+LI+A+ K
Sbjct: 279 FNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAK 338

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            G    A K+ + M++  +  +  TY +LI+GFC    +D A+++   M+     P   +
Sbjct: 339 EGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVT 398

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+ L+ G+C     E  ++L  E   RGL  +   Y  LI+   +    D AQ++F  M 
Sbjct: 399 YNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMV 458

Query: 506 GNGILGDSVIYTSLAYAYWRAGE 528
            +G+  D + Y+ L     + G+
Sbjct: 459 SDGVPPDIITYSILLDGLCKYGK 481



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 113/413 (27%), Positives = 197/413 (47%), Gaps = 2/413 (0%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           L V  +M      P +   + LLN     +       +  +MV++G   +   +N LIH 
Sbjct: 136 LAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHG 195

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
               +   +   L+  M  +  + DLFTY T++   CK+G    AL++  +ME+  I  +
Sbjct: 196 LFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEAN 255

Query: 270 IVTYNSLIHGFCREGRMREARRLFR--DIKGATPNHVTYTTLIDGYCRANDLEEALRLRE 327
           +V YN++I G C+   M +A  LF   + KG  P+  TY +LI   C      +A RL  
Sbjct: 256 VVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLS 315

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
            M  + + P VVT+NS++    KEG++ +A +L +EM ++ I P+ VT N+LIN +C   
Sbjct: 316 DMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHD 375

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
               A ++   M+    + D  TY  LI GFCKAK ++   EL   M   G   +  +Y+
Sbjct: 376 RLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYN 435

Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGN 507
            L+ G     + +   K+  + VS G+  D+  Y  L+   CK  K++ A  +F  +Q +
Sbjct: 436 TLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKS 495

Query: 508 GILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAK 560
            +  +   Y  +     +AG+ +   D+   +  + +   + IY +  + + +
Sbjct: 496 KMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCR 548



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 98/386 (25%), Positives = 178/386 (46%), Gaps = 19/386 (4%)

Query: 83  TMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYAN 142
           T+I  L K KH   A ++  K+  +         N+L+                     N
Sbjct: 261 TIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISC-----------------LCN 303

Query: 143 LKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHL 202
                D  ++   M    + P++     L+++ AK+       K++ +M+Q  +  NI  
Sbjct: 304 YGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVT 363

Query: 203 YNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRME 262
           YN LI+  C    +D+ +++   M  KD   D+ TYNTLI  +CK     E + +   M 
Sbjct: 364 YNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMS 423

Query: 263 REGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLE 320
           + G+  + VTYN+LI G  + G    A+++F+ +   G  P+ +TY+ L+DG C+   LE
Sbjct: 424 QRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLE 483

Query: 321 EALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLI 380
           +AL + E +    + P + TYN ++  +CK G++ D   L   ++ K + P+ +   T+I
Sbjct: 484 KALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMI 543

Query: 381 NAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFS 440
           + +C+ G    A  +   M E G + D   Y  LI    +  +   + EL+  M   GF 
Sbjct: 544 SGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFV 603

Query: 441 PSYCSYSWLVDGYCNKNNEEALLKLL 466
               + S +++   +   E++ L++L
Sbjct: 604 GDASTISMVINMLHDGRLEKSYLEML 629



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 52/237 (21%), Positives = 100/237 (42%), Gaps = 3/237 (1%)

Query: 335 YPGVVTYN---SILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTAS 391
           + G  +Y+    + R    E ++ DA  L  EM + +  P  +  + L++A  K+     
Sbjct: 40  FSGKTSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDV 99

Query: 392 AMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVD 451
            + +  +M   G+  + +TY  L++ FC+  ++ +A  +L  M+  G+ P   + S L++
Sbjct: 100 VISLGEQMQNLGIPHNHYTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLN 159

Query: 452 GYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILG 511
           GYC+       + L+D+ V  G   D   +  LI       K   A  L + M   G   
Sbjct: 160 GYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQP 219

Query: 512 DSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLF 568
           D   Y ++     + G+      +L  M + ++   + IY +      K   + D F
Sbjct: 220 DLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAF 276


>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 602

 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 149/532 (28%), Positives = 258/532 (48%), Gaps = 18/532 (3%)

Query: 58  SLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLN 117
           S+S  F  + +S+V ++   L++  +   +  +      ++       L+  +STP+   
Sbjct: 27  SISRPFVLYPDSSVSHHFSKLKATRSRKRLENRVSAVSKSEASGLNGRLQQIVSTPNGDL 86

Query: 118 ALVKIHDDPDGNSHVLSWLVIFYANLKMT--------QDGLQVFDQMRVHNLMPHLHACT 169
            ++ +   P G +   S+   F +N+ +         ++GL+  ++M     +P + ACT
Sbjct: 87  NVIGMESSPIGVNGSRSFEE-FASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACT 145

Query: 170 VLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFK 229
            L+    +   T    ++ + +   G V ++  YNVLI   CKS ++DK  ++L   E  
Sbjct: 146 SLIRGFCRSGKTKKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALEVL---ERM 202

Query: 230 DVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA 289
            V  D+ TYNT++   C  G   EA+ V DR  +    PD++TY  LI   C +  + +A
Sbjct: 203 SVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQA 262

Query: 290 RRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRK 347
            +L  ++  KG  P+ VTY  LI+G C+   L+EA++    M + G  P V+T+N ILR 
Sbjct: 263 MKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRS 322

Query: 348 LCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLD 407
           +C  GR  DA RLL++M  K  +P  VT N LIN  C+      A+ V  +M + G + +
Sbjct: 323 MCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPN 382

Query: 408 QFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLD 467
             +Y  L+HGFC+ K+MD A E L  M+  G  P   +Y+ L+   C     +A +++L+
Sbjct: 383 SLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILN 442

Query: 468 EFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
           +  S+G    +  Y  +I    K  K +YA  L   M+  G+  D + Y++L     R G
Sbjct: 443 QLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREG 502

Query: 528 EPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI---LDLFWSHVVDRG 576
           +      I  DM    +  +   Y +      K  +    +D F +++V++G
Sbjct: 503 KVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAID-FLAYMVEKG 553



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 95/341 (27%), Positives = 170/341 (49%), Gaps = 2/341 (0%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           ++ ++V D+       P +   T+L+ +   D       K+  +M + G   ++  YNVL
Sbjct: 225 KEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVL 284

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           I+  CK   +D+  K L  M     + ++ T+N ++   C  G   +A  +   M R+G 
Sbjct: 285 INGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGC 344

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALR 324
           SP +VT+N LI+  CR+  +  A  +   +   G  PN ++Y  L+ G+C+   ++ A+ 
Sbjct: 345 SPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIE 404

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
             E+M ++G YP +VTYN++L  LCK+G++  A  +LN+++ K  +P  +T NT+I+   
Sbjct: 405 YLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLT 464

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           K+G T  A+++   M   GL  D  TY  L+ G  +  ++D A ++   M      PS  
Sbjct: 465 KVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAV 524

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
           +Y+ ++ G C        +  L   V +G     + Y  LI
Sbjct: 525 TYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILI 565



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 101/359 (28%), Positives = 185/359 (51%), Gaps = 4/359 (1%)

Query: 132 VLSWLVIFYANLKMTQDG--LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYK 189
           V+++ ++  A    +  G  +++ D+MR     P +    VL+N + K+   D   K   
Sbjct: 243 VITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLN 302

Query: 190 KMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKG 249
            M   G   N+  +N+++ + C +      E+LL +M  K     + T+N LI   C+K 
Sbjct: 303 NMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKR 362

Query: 250 MHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYT 307
           +   A+ V ++M + G  P+ ++YN L+HGFC+E +M  A      +  +G  P+ VTY 
Sbjct: 363 LLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYN 422

Query: 308 TLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEK 367
           TL+   C+   ++ A+ +   +++KG  P ++TYN+++  L K G+   A  LL EM  K
Sbjct: 423 TLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRK 482

Query: 368 KIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIA 427
            + PD +T +TL+    + G    A+K+ + M    +     TY A++ G CKA++   A
Sbjct: 483 GLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRA 542

Query: 428 KELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
            + L  M++ G  P+  +Y+ L++G  ++   E  L+LL+E  SRG     S  + +++
Sbjct: 543 IDFLAYMVEKGCKPTEATYTILIEGIADEGLAEEALELLNELCSRGFVKKSSAEQVVVK 601


>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
          Length = 580

 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 142/442 (32%), Positives = 217/442 (49%), Gaps = 25/442 (5%)

Query: 158 VHNLMPHLHA------CTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA-- 209
           +H+L PH           VLL  L   +L     ++ K++++  +  N  L++ L  +  
Sbjct: 116 IHHLHPHCLDTKSYCLAVVLLARLPSPKL---ALQLLKQVMETRIATNRELFDELTLSRD 172

Query: 210 --CCKSSDV--------DKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
               KSS V         K  + +  ME    + ++ +YNT+I  Y  +G    A  + D
Sbjct: 173 RLSVKSSIVFDLLEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILD 232

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRAN 317
            M  +GI PD  TY SLI G C+EGR+ EA  LF  +   G  PN VTY TLIDGYC   
Sbjct: 233 AMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKG 292

Query: 318 DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCN 377
           DLE A   R+ M  KG+ P V TYN ++  L  EGR+ +A+ ++ EM +K I PD +T N
Sbjct: 293 DLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYN 352

Query: 378 TLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA 437
            LIN Y + G+   A  + N ML  G+     TY +LI+   +   M  A +L   +LD 
Sbjct: 353 ILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQ 412

Query: 438 GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYA 497
           G SP    ++ ++DG+C   N E    LL E   + +  D   +  L++  C++ KV+ A
Sbjct: 413 GVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEA 472

Query: 498 QRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSAS 557
           + L + M+  GI  D + Y +L   Y R G+ K    + D+M       TL  Y +    
Sbjct: 473 RMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKC 532

Query: 558 YAKDNE--ILDLFWSHVVDRGL 577
             K+ E  + +     +V++G+
Sbjct: 533 LCKNQEGDLAEELLKEMVNKGI 554



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 115/384 (29%), Positives = 198/384 (51%), Gaps = 19/384 (4%)

Query: 74  YKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVL 133
           +K ++ S+ T+IH  +   + + A+ +L+ + ++                 +PD  S+  
Sbjct: 204 FKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGI---------------EPD--SYTY 246

Query: 134 SWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQ 193
             L+         ++   +FD+M    L+P+      L++        +  +    +MV+
Sbjct: 247 GSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVK 306

Query: 194 LGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYE 253
            G++ ++  YN+L+HA      + + + ++ EM  K +  D  TYN LI  Y + G    
Sbjct: 307 KGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKR 366

Query: 254 ALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLID 311
           A  + + M  +GI P  VTY SLI+   R  RM+EA  LF  I  +G +P+ + +  +ID
Sbjct: 367 AFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMID 426

Query: 312 GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAP 371
           G+C   ++E A  L + M  K V P  VT+N++++  C+EG++ +A  LL+EM  + I P
Sbjct: 427 GHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKP 486

Query: 372 DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
           D+++ NTLI+ Y + GD   A  V++ ML  G      TY ALI   CK +E D+A+ELL
Sbjct: 487 DHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELL 546

Query: 432 FGMLDAGFSPSYCSYSWLVDGYCN 455
             M++ G SP   +Y  L++G  N
Sbjct: 547 KEMVNKGISPDDSTYLSLIEGMGN 570



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 133/523 (25%), Positives = 244/523 (46%), Gaps = 22/523 (4%)

Query: 1   MASLVALNSDTKFIKTISAIMLKGHWAKLLNPNIASSLTSTAIHKVLLNLYNCCHIPSLS 60
           +AS  +    T+ + + S +  + H+ + ++PN+  +L S         LYN C  P L 
Sbjct: 60  LASSESTPPITZEVISKSVLSSQWHFIEQVSPNLTPALISNV-------LYNLCSKPQLV 112

Query: 61  CAFFKWAESAVPNYKHSL--QSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNA 118
             F          + H L  +S+   + +L +    K A  +L+++      +   + + 
Sbjct: 113 SDFIHHL------HPHCLDTKSYCLAVVLLARLPSPKLALQLLKQVMETRIATNRELFDE 166

Query: 119 LVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKD 178
           L    D     S ++    +    LK  ++ +   + +      P++ +   +++  +  
Sbjct: 167 LTLSRDRLSVKSSIV--FDLLEGKLKKAREFIGFMEGL---GFKPNVVSYNTIIHGYSSR 221

Query: 179 RLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTY 238
              +   ++   M   G+  + + Y  LI   CK   +++   L  +M    +  +  TY
Sbjct: 222 GNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTY 281

Query: 239 NTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI-- 296
           NTLI  YC KG    A + +D M ++GI P + TYN L+H    EGRM EA  + +++  
Sbjct: 282 NTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRK 341

Query: 297 KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRD 356
           KG  P+ +TY  LI+GY R  + + A  L   M +KG+ P  VTY S++  L +  R+++
Sbjct: 342 KGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKE 401

Query: 357 ANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIH 416
           A+ L  ++ ++ ++PD +  N +I+ +C  G+   A  +   M    +  D+ T+  L+ 
Sbjct: 402 ADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQ 461

Query: 417 GFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCV 476
           G C+  +++ A+ LL  M   G  P + SY+ L+ GY  + + +    + DE +S G   
Sbjct: 462 GRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNP 521

Query: 477 DVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
            +  Y ALI+  CK ++ D A+ L   M   GI  D   Y SL
Sbjct: 522 TLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSL 564



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 45/172 (26%), Positives = 89/172 (51%), Gaps = 2/172 (1%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           +F+++    + P +     +++    +   +  + + K+M +  V  +   +N L+   C
Sbjct: 405 LFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRC 464

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           +   V++   LL EM+ + ++ D  +YNTLI+ Y ++G   +A  V+D M   G +P ++
Sbjct: 465 REGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLL 524

Query: 272 TYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEE 321
           TYN+LI   C+      A  L +++  KG +P+  TY +LI+G    + L E
Sbjct: 525 TYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTLVE 576


>gi|410109905|gb|AFV61032.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           rugosa]
          Length = 414

 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 121/412 (29%), Positives = 216/412 (52%), Gaps = 3/412 (0%)

Query: 77  SLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS-VLNALVKIHDDPDGNSHVLSW 135
           +L S+ TMIH L  ++    A+++++ +  R    + S V  A+ +       + +V S 
Sbjct: 1   TLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAIXETXGTQRSDJYVFSG 60

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           L+  Y      +D ++ +     H        C  +L  L K +   +VW  Y+++++ G
Sbjct: 61  LITAYLESGFLRDAIECYRLTXEHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECG 120

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
             A+++ +N+L+H  CK  D+   + +   +    +R  + +YNTL+  Y + G   E  
Sbjct: 121 YPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 180

Query: 256 AVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGY 313
            ++  M   G+ PD+ TY+ LI+G C+E +  +A  LF +  +KG  PN V +TTLIDG+
Sbjct: 181 RLKSAMLASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVXFTTLIDGH 240

Query: 314 CRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDN 373
           C+   ++ A+ + + M ++ + P ++TYN+++  LCK+G ++ A+ L++EM+ K + PD 
Sbjct: 241 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSXKGLKPDK 300

Query: 374 VTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFG 433
           +T  TLI+  CK GD  SA +   RM++    LD+  Y ALI G C       A+++L  
Sbjct: 301 ITYTTLIDGCCKEGDLDSAFEHXKRMIQENXRLDEVXYTALISGLCXEGRSVDAEKMLRE 360

Query: 434 MLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
           ML  G  P   +Y+ +++ +C K +     KLL E    G    V  Y  L+
Sbjct: 361 MLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLM 412



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 91/279 (32%), Positives = 144/279 (51%), Gaps = 2/279 (0%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           G    +  +N L+H FC++G +R A+ +F  I   G  P+ V+Y TL++GY R  DL+E 
Sbjct: 120 GYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEG 179

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            RL+  M A GV P V TY+ ++   CKE +  DAN L +EM  K + P+ V   TLI+ 
Sbjct: 180 FRLKSAMLASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVXFTTLIDG 239

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +CK G    AM++  +ML   L  D  TY  LI+G CK  ++  A  L+  M   G  P 
Sbjct: 240 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSXKGLKPD 299

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ L+DG C + + ++  +     +     +D   Y ALI   C + +   A+++  
Sbjct: 300 KITYTTLIDGCCKEGDLDSAFEHXKRMIQENXRLDEVXYTALISGLCXEGRSVDAEKMLR 359

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
            M   G+  D+  YT +   + + G+    S +L +M R
Sbjct: 360 EMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQR 398



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 67/293 (22%), Positives = 121/293 (41%), Gaps = 20/293 (6%)

Query: 272 TYNSLIHGFCREGRMREARRLF-----RDIKGATP---------------NHVTYTTLID 311
           +Y ++IH  C    + EA+ L      R  KG+                 +   ++ LI 
Sbjct: 4   SYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAIXETXGTQRSDJYVFSGLIT 63

Query: 312 GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAP 371
            Y  +  L +A+    +      +    T   +L  L K    +       E+ E     
Sbjct: 64  AYLESGFLRDAIECYRLTXEHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPA 123

Query: 372 DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
                N L++ +CK GD   A  V + + + GL     +Y  L++G+ +  ++D    L 
Sbjct: 124 SLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLK 183

Query: 432 FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
             ML +G  P   +YS L++G C ++  +   +L DE + +GL  +   +  LI   CK 
Sbjct: 184 SAMLASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVXFTTLIDGHCKN 243

Query: 492 EKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL 544
            +VD A  ++  M    +  D + Y +L Y   + G+ K    ++D+M  + L
Sbjct: 244 GRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSXKGL 296



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 63/295 (21%), Positives = 114/295 (38%), Gaps = 88/295 (29%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKI---ALR-DFLSTPSVLNALVKIHDDPDG 128
            Y  SL     ++H   K+   + AQ++ + I    LR   +S  +++N  +++ D  +G
Sbjct: 120 GYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEG 179

Query: 129 ------------NSHVLSWLVIFYANLKMTQ--DGLQVFDQMRVHNLMPHLHACTVLLNS 174
                          V ++ V+     K ++  D  ++FD+M V  L+P+    T L++ 
Sbjct: 180 FRLKSAMLASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVXFTTLIDG 239

Query: 175 LAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA------------------------- 209
             K+   D+  ++YK+M+   +  ++  YN LI+                          
Sbjct: 240 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSXKGLKPD 299

Query: 210 ----------CCKSSDVDKV-----------------------------------EKLLC 224
                     CCK  D+D                                     EK+L 
Sbjct: 300 KITYTTLIDGCCKEGDLDSAFEHXKRMIQENXRLDEVXYTALISGLCXEGRSVDAEKMLR 359

Query: 225 EMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHG 279
           EM    ++ D  TY  +I  +CKKG  ++   +   M+R+G  P +VTYN L++G
Sbjct: 360 EMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 414


>gi|297734265|emb|CBI15512.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 147/513 (28%), Positives = 251/513 (48%), Gaps = 10/513 (1%)

Query: 38  LTSTAIHKVLLNLYNCCHIPSLSC-AFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKS 96
           L +  I +VLL     C   S +  +FF W ++ +   + S Q++  ++H L  +++F  
Sbjct: 98  LGAQEISRVLLR----CQSDSFTALSFFNWVKNDL-GLRPSTQNYCIVVHTLAWSRNFSQ 152

Query: 97  AQNMLEKIA--LRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFD 154
           A   L ++   ++D L +  V   L+   +D + +  V   LV  Y  +   ++GL+ F 
Sbjct: 153 AMKFLCELVELVKDDLPSEDVFKNLILCTEDCNWDPVVFDMLVKAYLRMGRVREGLRSFR 212

Query: 155 QMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSS 214
           +M     +P +     LLN L K   TD  W+VY++M + G+  N++ +N+L H  CK  
Sbjct: 213 RMLRVGFVPTVITSNYLLNGLLKLNYTDRCWEVYEEMERFGIAPNLYTFNILTHVLCKDG 272

Query: 215 DVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYN 274
           D  KV K L +ME +    D+ TYNTLI  YC+KG   +A  +   M R G+ PD+V+Y 
Sbjct: 273 DTGKVNKFLEKMEEEGFDPDIVTYNTLINSYCRKGRLDDAFYLYKIMYRRGVVPDLVSYT 332

Query: 275 SLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAK 332
           +L++G C+EGR+REA +LF  +  +G +P+ VTY TLI GYC+   ++E+  L   M   
Sbjct: 333 ALMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWN 392

Query: 333 GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
           G+ P   T   ++    KEG+   A  L+ E+    ++      + LI A C+     +A
Sbjct: 393 GISPDSFTCWVLVEGYGKEGKFLSALNLVVELQRFGVSISQDIYSYLIVALCRENRPFAA 452

Query: 393 MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
             +  RM + G   +   Y  LI  FC+   +  A  L   M+D    P+  +Y  ++  
Sbjct: 453 KNLLERMSKDGHKPELEIYNELIKSFCQCDCIAEALLLKMEMVDKEIKPNLATYRAVIGC 512

Query: 453 YCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGD 512
               +       L+ E V+ G+  D+ + RAL   +C++  +D A+ L +       + D
Sbjct: 513 LSRLSRSMEGESLVGEMVASGMLPDLEICRALFYGYCRENDIDKAESLLSFFAKEFQIHD 572

Query: 513 SVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
           +  + +L       G+     +I D M +  L+
Sbjct: 573 TESFNALIRITSAKGDIARSLEIQDMMLKMGLL 605



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 134/528 (25%), Positives = 232/528 (43%), Gaps = 53/528 (10%)

Query: 38  LTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSA 97
           +  T+IH + LNLY C     LS    ++    +P + +S  S  + +  L +++     
Sbjct: 1   MNPTSIHAIKLNLYKC----PLSLTVLRFI--LIPKFPYSSSSS-SSLQTLNQSQ----- 48

Query: 98  QNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMR 157
                         T S+ N+L  +       +++++ +    +NLK     L +     
Sbjct: 49  --------------TNSISNSLYHLLPQTQNPNNIVNLIC---SNLKQHNSNLALL-HTE 90

Query: 158 VHNLMPHLHACTV--LLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSD 215
           V+ L+PHL A  +  +L     D  T + +  + K   LG+  +   Y +++H    S +
Sbjct: 91  VNALLPHLGAQEISRVLLRCQSDSFTALSFFNWVKN-DLGLRPSTQNYCIVVHTLAWSRN 149

Query: 216 VDKVEKLLCEMEFKDVRADLFTYNTLIAL-YCKKGMHYEALAVQDRMEREGISPDIVTYN 274
             +  K LCE+  + V+ DL + +    L  C +  ++                D V ++
Sbjct: 150 FSQAMKFLCEL-VELVKDDLPSEDVFKNLILCTEDCNW----------------DPVVFD 192

Query: 275 SLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAK 332
            L+  + R GR+RE  R FR +   G  P  +T   L++G  + N  +    + E M   
Sbjct: 193 MLVKAYLRMGRVREGLRSFRRMLRVGFVPTVITSNYLLNGLLKLNYTDRCWEVYEEMERF 252

Query: 333 GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
           G+ P + T+N +   LCK+G     N+ L +M E+   PD VT NTLIN+YC+ G    A
Sbjct: 253 GIAPNLYTFNILTHVLCKDGDTGKVNKFLEKMEEEGFDPDIVTYNTLINSYCRKGRLDDA 312

Query: 393 MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
             +   M   G++ D  +Y AL++G CK   +  A +L   M+  G SP   +Y+ L+ G
Sbjct: 313 FYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTYNTLIHG 372

Query: 453 YCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGD 512
           YC +   +    LL + +  G+  D      L+  + K+ K   A  L   +Q  G+   
Sbjct: 373 YCKEGKMQESRSLLHDMIWNGISPDSFTCWVLVEGYGKEGKFLSALNLVVELQRFGVSIS 432

Query: 513 SVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAK 560
             IY+ L  A  R   P A  ++L+ M +      L+IY     S+ +
Sbjct: 433 QDIYSYLIVALCRENRPFAAKNLLERMSKDGHKPELEIYNELIKSFCQ 480



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 87/364 (23%), Positives = 147/364 (40%), Gaps = 54/364 (14%)

Query: 84  MIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANL 143
           + H+L K+         LEK+    F               DPD  ++  + L+  Y   
Sbjct: 264 LTHVLCKDGDTGKVNKFLEKMEEEGF---------------DPDIVTY--NTLINSYCRK 306

Query: 144 KMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLY 203
               D   ++  M    ++P L + T L+N L K+       +++ +MV  G+  +I  Y
Sbjct: 307 GRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTY 366

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFT-------------------------- 237
           N LIH  CK   + +   LL +M +  +  D FT                          
Sbjct: 367 NTLIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWVLVEGYGKEGKFLSALNLVVELQR 426

Query: 238 ---------YNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
                    Y+ LI   C++   + A  + +RM ++G  P++  YN LI  FC+   + E
Sbjct: 427 FGVSISQDIYSYLIVALCRENRPFAAKNLLERMSKDGHKPELEIYNELIKSFCQCDCIAE 486

Query: 289 ARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILR 346
           A  L  ++  K   PN  TY  +I    R +   E   L   M A G+ P +    ++  
Sbjct: 487 ALLLKMEMVDKEIKPNLATYRAVIGCLSRLSRSMEGESLVGEMVASGMLPDLEICRALFY 546

Query: 347 KLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLML 406
             C+E  I  A  LL+   ++    D  + N LI      GD A ++++++ ML+ GL+ 
Sbjct: 547 GYCRENDIDKAESLLSFFAKEFQIHDTESFNALIRITSAKGDIARSLEIQDMMLKMGLLP 606

Query: 407 DQFT 410
           +  T
Sbjct: 607 NPLT 610



 Score = 75.1 bits (183), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 49/208 (23%), Positives = 89/208 (42%), Gaps = 7/208 (3%)

Query: 372 DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
           D V  + L+ AY ++G     ++   RML  G +    T   L++G  K    D   E+ 
Sbjct: 187 DPVVFDMLVKAYLRMGRVREGLRSFRRMLRVGFVPTVITSNYLLNGLLKLNYTDRCWEVY 246

Query: 432 FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
             M   G +P+  +++ L    C   +   + K L++    G   D+  Y  LI  +C+K
Sbjct: 247 EEMERFGIAPNLYTFNILTHVLCKDGDTGKVNKFLEKMEEEGFDPDIVTYNTLINSYCRK 306

Query: 492 EKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIY 551
            ++D A  L+ +M   G++ D V YT+L     + G  +    +   M  R L   +  Y
Sbjct: 307 GRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTY 366

Query: 552 RSFSASYAKDNEIL-------DLFWSHV 572
            +    Y K+ ++        D+ W+ +
Sbjct: 367 NTLIHGYCKEGKMQESRSLLHDMIWNGI 394


>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Vitis vinifera]
          Length = 755

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 146/519 (28%), Positives = 254/519 (48%), Gaps = 42/519 (8%)

Query: 36  SSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFK 95
           S+L      +VL+ L   C    L+  FF+WA+  +  ++H+ +++  ++HIL   + + 
Sbjct: 94  SALAPIWASRVLVEL---CQDARLALRFFEWAKGRI-GFQHTSEAYCILVHILFCARFYS 149

Query: 96  SAQNML-EKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFD 154
            A  +L E I LR  L +  V + L    +       V   L      L M ++  + F 
Sbjct: 150 DANAVLKELICLRRVLPSWDVFDLLWATRNVCVPGFGVFDALFSALIELGMLEEASECFL 209

Query: 155 QMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSS 214
           +MR   + P   +C  LL+ L+K    D+  K +K M   G                   
Sbjct: 210 KMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAG------------------- 250

Query: 215 DVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYN 274
                           ++  +FTYN +I   CK+G    A ++  +M+  G +PDIVTYN
Sbjct: 251 ----------------IKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYN 294

Query: 275 SLIHGFCREGRMREARRLFRDIKGAT--PNHVTYTTLIDGYCRANDLEEALRLREVMAAK 332
           SLI G  + G + E   +F  +K A   P+ +TY  LI+ +C+   + +A      M A 
Sbjct: 295 SLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKAN 354

Query: 333 GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
           G+ P VVTY++ +   CKEG +++A +   +M    + P+  T  +LI+A CK G+ A A
Sbjct: 355 GLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEA 414

Query: 393 MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
           +K+   +L+AG+ L+  TY AL+ G C+   M  A+E+   ML+AG +P+  +Y+ LV G
Sbjct: 415 LKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHG 474

Query: 453 YCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGD 512
           +      E    +L E   + +  D+ +Y  ++   C + +++ A+ L   ++ +GI  +
Sbjct: 475 FIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTN 534

Query: 513 SVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIY 551
           +VIYT+L  AY+++G+      +L++M    L+ T   Y
Sbjct: 535 AVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTY 573



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 150/526 (28%), Positives = 247/526 (46%), Gaps = 25/526 (4%)

Query: 59  LSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNA 118
           LS  FFK  +      K S+ ++  MI  L K    + A+++  ++    F       N+
Sbjct: 238 LSRKFFK--DMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNS 295

Query: 119 LVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKD 178
           L+  H                   L +  + + +F+QM+  +  P +     L+N   K 
Sbjct: 296 LIDGH-----------------GKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKF 338

Query: 179 RLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTY 238
                 ++   +M   G+  N+  Y+  I A CK   + +  K   +M    +  + FTY
Sbjct: 339 ERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTY 398

Query: 239 NTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI-- 296
            +LI   CK G   EAL + + + + GI  ++VTY +L+ G C EGRM+EA  +FR +  
Sbjct: 399 TSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLN 458

Query: 297 KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRD 356
            G  PN  TYT L+ G+ +A ++E A  + + M  K + P ++ Y +IL  LC E R+ +
Sbjct: 459 AGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEE 518

Query: 357 ANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIH 416
           A  L+ E+ E  I  + V   TL++AY K G    A+ +   ML+ GL+  + TY ALI 
Sbjct: 519 AKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALID 578

Query: 417 GFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCV 476
           G CK+  +  A      M + G  P+   Y+ LVDG C  N  E   KL DE + +G+  
Sbjct: 579 GLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMP 638

Query: 477 DVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDIL 536
           D   Y ALI    K   +  A  L + M   G+  D   YT+L +    +G+ +   ++L
Sbjct: 639 DKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLL 698

Query: 537 DDMYRRRLMITLKIYRSFSASY---AKDNEILDLFWSHVVDRGLMS 579
           D+M  + ++    +Y      Y    K +E L+L  + +  RG+++
Sbjct: 699 DEMIGKGVLPDEVVYMCLIKKYYALGKVDEALEL-QNEMAKRGMIT 743



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 90/313 (28%), Positives = 156/313 (49%), Gaps = 2/313 (0%)

Query: 169 TVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEF 228
           T LL+ L ++       +V++ M+  GV  N   Y  L+H   K+ +++  + +L EM+ 
Sbjct: 434 TALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKE 493

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
           K ++ DL  Y T++   C +    EA  +   ++  GI+ + V Y +L+  + + G+  E
Sbjct: 494 KCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATE 553

Query: 289 ARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILR 346
           A  L  ++   G     VTY  LIDG C++  ++EA+     M+  G+ P V  Y +++ 
Sbjct: 554 ALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVD 613

Query: 347 KLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLML 406
            LCK      A +L +EM +K + PD +    LI+   K G+   A+ +++RM+E G+ L
Sbjct: 614 GLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMEL 673

Query: 407 DQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLL 466
           D   Y ALI G   + ++  A+ LL  M+  G  P    Y  L+  Y      +  L+L 
Sbjct: 674 DLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQ 733

Query: 467 DEFVSRGLCVDVS 479
           +E   RG+   +S
Sbjct: 734 NEMAKRGMITGLS 746


>gi|255660804|gb|ACU25571.1| pentatricopeptide repeat-containing protein [Glandularia araucana]
          Length = 418

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 116/409 (28%), Positives = 218/409 (53%), Gaps = 3/409 (0%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS-VLNALVKIHDDPDGNSH 131
            ++H+LQS+ TMIH L  ++    A+ +++ +  R    + S V  A+++       + +
Sbjct: 8   TFRHTLQSYCTMIHFLCTHQMIAEAKTLIQIVVSRKGKGSASAVFAAILETKGTQISDIY 67

Query: 132 VLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKM 191
           V S L+  Y      +D ++ +   + H           ++  L K +   +VW  Y++ 
Sbjct: 68  VFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTXRKVIEHLMKLKYFKLVWGFYEES 127

Query: 192 VQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMH 251
           ++ G  A+++ +N+L+H+  K  ++   + +   +    +R  + ++NTL+  Y K G  
Sbjct: 128 LEYGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDL 187

Query: 252 YEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTL 309
            E   +++ M+  G+ PD+ TY+ LI+G C+E +M +A  LF ++   G  PN VT+TTL
Sbjct: 188 DEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFDEMLNNGLVPNGVTFTTL 247

Query: 310 IDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI 369
           IDG+C+   ++ A+ + + M ++ + P ++TYN+++  LCK+G ++ A  L +EM+ K +
Sbjct: 248 IDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGL 307

Query: 370 APDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKE 429
            PD +T  TLI+  CK G   +A + + RM++  + LD   Y ALI G C+      A++
Sbjct: 308 KPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEK 367

Query: 430 LLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDV 478
           +L  ML  G  P   +Y+ +++ +C K +     KLL E    G    V
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSV 416



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 90/279 (32%), Positives = 146/279 (52%), Gaps = 2/279 (0%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           G    +  +N L+H F +EG +R A+ +F  I   G  P+ V++ TL++GY +  DL+E 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEG 190

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            RL+  M A GV P V TY+ ++  LCKE ++ DAN L +EM    + P+ VT  TLI+ 
Sbjct: 191 FRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFDEMLNNGLVPNGVTFTTLIDG 250

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +CK G    AM++  +ML   L  D  TY  LI+G CK  ++  A++L   M   G  P 
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPD 310

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ L+DG C + + E   +     +   + +D   Y ALI   C++ +   A+++  
Sbjct: 311 KITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLR 370

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
            M   G+  +   YT +   + + G+    S +L +M R
Sbjct: 371 EMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQR 409



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 87/318 (27%), Positives = 151/318 (47%), Gaps = 31/318 (9%)

Query: 66  WAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKI---ALR-DFLSTPSVLNALVK 121
           + ES    Y  SL     ++H   K    + AQ++ + I    LR   +S  +++N  +K
Sbjct: 124 YEESLEYGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIK 183

Query: 122 IHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLT 181
           + D                       +G ++ + M+   + P ++  +VL+N L K+   
Sbjct: 184 LGD---------------------LDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKM 222

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
           +   +++ +M+  G+V N   +  LI   CK+  VD   ++  +M  + +  DL TYNTL
Sbjct: 223 EDANELFDEMLNNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTL 282

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA----RRLFRDIK 297
           I   CKKG   +A  + D M  +G+ PD +TY +LI G C+EG +  A    +R+ ++  
Sbjct: 283 IYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKE-- 340

Query: 298 GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDA 357
               + V YT LI G C+     +A ++   M + G+ P + TY  I+ + CK+G +   
Sbjct: 341 NIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTG 400

Query: 358 NRLLNEMNEKKIAPDNVT 375
           ++LL EM      P  VT
Sbjct: 401 SKLLKEMQRDGYVPSVVT 418



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 90/335 (26%), Positives = 152/335 (45%), Gaps = 27/335 (8%)

Query: 232 RADLFTYNTLIALYCKKGMHYEALA-VQDRMEREGISP-----------------DIVTY 273
           R  L +Y T+I   C   M  EA   +Q  + R+G                    DI  +
Sbjct: 10  RHTLQSYCTMIHFLCTHQMIAEAKTLIQIVVSRKGKGSASAVFAAILETKGTQISDIYVF 69

Query: 274 NSLIHGFCREGRMREA---RRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMA 330
           + LI  +   G +R+A    RL ++ K   P   T   +I+   +    +      E   
Sbjct: 70  SGLITAYLESGFLRDAIECYRLTKEHKFRVPFD-TXRKVIEHLMKLKYFKLVWGFYEESL 128

Query: 331 AKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTA 390
             G    +  +N ++    KEG IR A  + + + +  + P  V+ NTL+N Y K+GD  
Sbjct: 129 EYGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLD 188

Query: 391 SAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLV 450
              ++KN M  +G+  D +TY  LI+G CK  +M+ A EL   ML+ G  P+  +++ L+
Sbjct: 189 EGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFDEMLNNGLVPNGVTFTTLI 248

Query: 451 DGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGIL 510
           DG+C     +  +++  + +S+ L  D+  Y  LI   CKK  +  AQ L + M   G+ 
Sbjct: 249 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLK 308

Query: 511 GDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
            D + YT+L     + G  +   +     YR+R++
Sbjct: 309 PDKITYTTLIDGSCKEGHLETAFE-----YRKRMI 338


>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
 gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
          Length = 585

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 126/422 (29%), Positives = 208/422 (49%), Gaps = 12/422 (2%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D +++FD++      P L   T ++  L K   T    ++ KKM + G   ++  YN +I
Sbjct: 159 DAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVI 218

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
            + CK    ++      EM  + +  ++ TY++++  +C  G   EA ++  +M    + 
Sbjct: 219 DSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVM 278

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
           P+ VT+  L+ G C+EG + EARR+F  +   G  P+  TY+ L+DGYC  + ++EA +L
Sbjct: 279 PNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKL 338

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
            ++M  KG  P V  YN ++   CK  R+ +A  LL+EM ++ + PD VT +TL+  +C+
Sbjct: 339 FDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQ 398

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            G    A K+   M   GL+ D  TY  L+ G CK   +D A  LL  M ++   P  C 
Sbjct: 399 AGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICI 458

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+ L+ G CN    EA  +L      +G+   V  Y  +I    K+   + A  +F  M 
Sbjct: 459 YNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMV 518

Query: 506 GNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEIL 565
            NG L +S  Y      + R G+P     ++++M          + R FSA  +    +L
Sbjct: 519 VNGCLPNSCTYNVAIQGFLRNGDPSNAVRLIEEM----------VGRGFSADSSTFQMLL 568

Query: 566 DL 567
           DL
Sbjct: 569 DL 570



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 124/416 (29%), Positives = 200/416 (48%), Gaps = 4/416 (0%)

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
           Y NL    D +  F+Q+     +P +     LL SL K +    V  + K+M    +  N
Sbjct: 44  YNNLHSVADAVASFNQLLGIRPLPPVVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPN 103

Query: 200 IHLYNVLIHACCKSS--DVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAV 257
           ++   +LI+  C S+   V      L +M    ++    T+ TL+   C K    +A+ +
Sbjct: 104 VYTLTILINCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKL 163

Query: 258 QDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCR 315
            D + + G +P ++TY ++I G C+ G    A +L + +  KG  P+ V Y T+ID  C+
Sbjct: 164 FDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCK 223

Query: 316 ANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVT 375
                EA+     M  +G+ P VVTY+SIL   C  G++ +A  L  +M  + + P+ VT
Sbjct: 224 DRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVT 283

Query: 376 CNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGML 435
              L++  CK G    A +V   M E G+  D +TY AL+ G+C   +MD A++L   M+
Sbjct: 284 FTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMV 343

Query: 436 DAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVD 495
             GF+PS   Y+ L++G+C          LL E   R L  D   Y  L++ FC+  +  
Sbjct: 344 GKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQ 403

Query: 496 YAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIY 551
            AQ+LF  M   G+L DS+ Y+ L     + G       +L  M   ++   + IY
Sbjct: 404 VAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIY 459



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 114/420 (27%), Positives = 203/420 (48%), Gaps = 31/420 (7%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALR----DFLSTPSVLNALVK------- 121
            +  SL ++ T+I  L K  H  +A  +L+K+  +    D ++  +V+++L K       
Sbjct: 171 GFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEA 230

Query: 122 -------IHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNS 174
                  +      N    S ++  + NL    +   +F QM   N+MP+    T+L++ 
Sbjct: 231 MYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDG 290

Query: 175 LAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRAD 234
           L K+ +     +V++ M + GV  + + Y+ L+   C  S +D+ +KL   M  K     
Sbjct: 291 LCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPS 350

Query: 235 LFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR 294
           +  YN LI  +CK     EA  +   M    ++PD VTY++L+ GFC+ GR + A++LF+
Sbjct: 351 VRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFK 410

Query: 295 DI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEG 352
           ++   G  P+ +TY+ L+DG C+   L+EA RL + M    + P +  YN +++ +C  G
Sbjct: 411 EMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFG 470

Query: 353 RIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYK 412
           ++  A  L + +  K I P  VT   +I+   K G +  A ++  +M+  G + +  TY 
Sbjct: 471 KLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYN 530

Query: 413 ALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSR 472
             I GF +  +   A  L+  M+  GFS    ++  L+D           L+  DE +SR
Sbjct: 531 VAIQGFLRNGDPSNAVRLIEEMVGRGFSADSSTFQMLLD-----------LESNDEIISR 579



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 93/355 (26%), Positives = 169/355 (47%), Gaps = 20/355 (5%)

Query: 238 YNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGR------MREARR 291
           +N L+    KK  +   +++  +M+   I P++ T   LI+  C   R           +
Sbjct: 72  FNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTILINCLCHSNRDHVHFAFSALGK 131

Query: 292 LFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
           +F+   G  P HVT+ TL++G C    + +A++L + +   G  P ++TY +I++ LCK 
Sbjct: 132 MFK--LGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKI 189

Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
           G   +A +LL +M EK   PD V  NT+I++ CK      AM   + M++ G+  +  TY
Sbjct: 190 GHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTY 249

Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
            +++HGFC   +++ A  L   M+     P+  +++ LVDG C +       ++ +    
Sbjct: 250 SSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTE 309

Query: 472 RGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKA 531
            G+  D   Y AL+  +C + ++D AQ+LF++M G G      +Y  L   + ++     
Sbjct: 310 NGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNE 369

Query: 532 CSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKEM 586
              +L +MY R L      Y +    + +              R  +++ +FKEM
Sbjct: 370 AKTLLSEMYDRDLTPDTVTYSTLMQGFCQ------------AGRPQVAQKLFKEM 412


>gi|255563546|ref|XP_002522775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538013|gb|EEF39626.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1071

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 137/521 (26%), Positives = 243/521 (46%), Gaps = 39/521 (7%)

Query: 59  LSCAFFKWA-ESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLN 117
           L+  F  W  +      +H         HIL + + +++A+++L+ ++    + + SV  
Sbjct: 27  LALKFLNWVIQQPGLELRHLTHMLSITTHILVRARLYENAKSILKHLSQMG-VGSKSVFG 85

Query: 118 ALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAK 177
           AL+  +     N  V   L+  Y    M  D L+ F  M +    P ++ C +LL  L K
Sbjct: 86  ALMNTYPLCKSNPSVFDLLIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVK 145

Query: 178 DRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFT 237
           +R    VW  +K+M+   V  ++  +N+LI+  C    + K   LL +ME       + T
Sbjct: 146 ERKVGAVWLFFKEMLARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVT 205

Query: 238 YNTLIALYCKKGMHYEALAVQDRMEREG-------------------------------- 265
           YNT++  YCKKG +  AL + D+M  +G                                
Sbjct: 206 YNTVLNWYCKKGRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMR 265

Query: 266 ---ISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLE 320
              ISP+ +TYNS+I+GF +EG++  A R+F+++      PN VTY  LIDG+C   + E
Sbjct: 266 KRMISPNEITYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFE 325

Query: 321 EALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLI 380
           +AL + E+M A G  P  V+Y+++L  LC+  +   +  +L  M    +    +    +I
Sbjct: 326 QALTILEMMEATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMI 385

Query: 381 NAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFS 440
           +  C+ G    ++K+ ++ML+ G++ D  T+  LI+GFC+  ++   KE++  M  AG +
Sbjct: 386 DGLCRNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLA 445

Query: 441 PSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRL 500
           P+   Y+ L+  YC   +     K+       G   +  +   L+   CK  KV  A+  
Sbjct: 446 PNSIIYTTLIYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYF 505

Query: 501 FNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
           F+ M   G + +S+ +  +   Y  +G       + D+M +
Sbjct: 506 FHHMSKIGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIK 546



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 123/502 (24%), Positives = 234/502 (46%), Gaps = 25/502 (4%)

Query: 84  MIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANL 143
           +I++L      K A  +L+K+    ++  PSV+             + VL+W    Y   
Sbjct: 174 LINVLCVEGKLKKAGYLLKKMEESGYV--PSVVTY-----------NTVLNW----YCKK 216

Query: 144 KMTQDGLQVFDQMRVHNLMPHLHACT--VLLNSLAKDRLTDMVWKVYKKMVQLGVVANIH 201
              +  L++ DQM    +     ACT  +L++ L K+  +   + + KKM +  +  N  
Sbjct: 217 GRYKAALELIDQMGSKGI--EADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEI 274

Query: 202 LYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRM 261
            YN +I+   K   +    ++  EM   ++  +  TYN LI  +C  G   +AL + + M
Sbjct: 275 TYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMM 334

Query: 262 EREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDL 319
           E  G  P+ V+Y++L++G CR  +   ++ +   ++  G     + YT +IDG CR   L
Sbjct: 335 EATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLL 394

Query: 320 EEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTL 379
            E+++L + M   GV P VVT++ ++   C+ G+I++   ++ +M +  +AP+++   TL
Sbjct: 395 NESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTL 454

Query: 380 INAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGF 439
           I  YCK GD   A KV   M   G   + F    L+   CK  ++ +A+     M   G 
Sbjct: 455 IYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGN 514

Query: 440 SPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQR 499
            P+  ++  +++GY N  N      + DE +  G       Y  L++  C+  K   A+R
Sbjct: 515 VPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKR 574

Query: 500 LFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYA 559
           L + +       D+V Y ++    +++G       + D+M +R ++     Y    A   
Sbjct: 575 LLDKLHYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGLI 634

Query: 560 KDNEILDL--FWSHVVDRGLMS 579
           +  +++    F+ +++ +G +S
Sbjct: 635 RRGKMVAALHFYGNLLGKGAVS 656



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 116/456 (25%), Positives = 209/456 (45%), Gaps = 29/456 (6%)

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHL-HACTVLLNSLAKDRLTDMVWKVYKKMVQL 194
           L + + N  + Q GL+          + HL H  ++  + L + RL +    + K + Q+
Sbjct: 27  LALKFLNWVIQQPGLE----------LRHLTHMLSITTHILVRARLYENAKSILKHLSQM 76

Query: 195 GVVA----------------NIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTY 238
           GV +                N  ++++LI    +   V    +    M  +     ++T 
Sbjct: 77  GVGSKSVFGALMNTYPLCKSNPSVFDLLIRVYLREGMVGDALETFRLMGIRGFNPSVYTC 136

Query: 239 NTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK- 297
           N L+    K+            M    + PD+ T+N LI+  C EG++++A  L + ++ 
Sbjct: 137 NMLLGKLVKERKVGAVWLFFKEMLARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEE 196

Query: 298 -GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRD 356
            G  P+ VTY T+++ YC+    + AL L + M +KG+     TYN ++  LCK  R   
Sbjct: 197 SGYVPSVVTYNTVLNWYCKKGRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAK 256

Query: 357 ANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIH 416
              LL +M ++ I+P+ +T N++IN + K G   +A ++   M    L+ +  TY ALI 
Sbjct: 257 GYLLLKKMRKRMISPNEITYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALID 316

Query: 417 GFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCV 476
           G C     + A  +L  M   G  P+  SYS L++G C     E    +L+     G+ V
Sbjct: 317 GHCHDGNFEQALTILEMMEATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIV 376

Query: 477 DVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDIL 536
               Y A+I   C+   ++ + +L + M  +G++ D V ++ L   + R G+ K   +I+
Sbjct: 377 GCIAYTAMIDGLCRNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEII 436

Query: 537 DDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHV 572
             MY+  L     IY +   +Y K  ++++ F  +V
Sbjct: 437 CKMYKAGLAPNSIIYTTLIYNYCKTGDVVEAFKVYV 472



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 87/333 (26%), Positives = 156/333 (46%), Gaps = 3/333 (0%)

Query: 195  GVVANIHLYNVLIHACCKSSDVDKVEKLLCEM-EFKDVRADLFTYNTLIALYCKKGMHYE 253
            G+ A++   NV+++   +   + K   +   M     +   L TYN L+  Y KK    +
Sbjct: 689  GLCADLIATNVILNGYSRMGKMAKAGDIFTMMWSGITISPSLATYNILLHGYAKKKNLSK 748

Query: 254  ALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLID 311
               + + M R GI PD +T +SLI GFC+   +    +L + +   G   +  T+  LI 
Sbjct: 749  CSNLYNIMMRTGIFPDKLTCHSLILGFCKSAMLDVGLKLLKKMLLDGVAVDQCTFNMLIM 808

Query: 312  GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAP 371
             YC  +++ +A  L  +M    ++P + T++SI+  L +   +++++ LL+EM E+   P
Sbjct: 809  KYCETDEVGKAFDLVNIMNLFDIFPDMTTHDSIISVLSRVSTVQESHLLLHEMLERGCIP 868

Query: 372  DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
            D      L+N  C++G    A K+K+ M   G+        AL+ G  K  +++ AK +L
Sbjct: 869  DRRQYIALVNRMCRMGHIHGAFKLKDEMEALGISSGDVAESALVRGLAKCGKVEEAKLVL 928

Query: 432  FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
              ML     P+  +++ L+  +C   +    LKL D      + +DV  Y  LI   C  
Sbjct: 929  DFMLRKSLIPTIATFTTLMHMFCRNESLVEALKLKDTMDFCDVKLDVIAYNVLISGLCAD 988

Query: 492  EKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYW 524
              V  A +L+  ++  G+  +   Y  L  A +
Sbjct: 989  GDVASALKLYKEIKQRGLWPNMTTYCILIDAIF 1021



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 120/517 (23%), Positives = 224/517 (43%), Gaps = 37/517 (7%)

Query: 80   SHWT---MIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWL 136
            SH+T   ++  L +   FK A+ +L+K+        PS ++ +              ++ 
Sbjct: 552  SHFTYGGLLKALCRAGKFKEAKRLLDKLHY-----IPSAVDTV--------------TYN 592

Query: 137  VIFYANLK--MTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQL 194
             I     K  M  D + +FD+M   N++P  +   ++   L +          Y  ++  
Sbjct: 593  TILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGLIRRGKMVAALHFYGNLLGK 652

Query: 195  GVVANIH-LYNVLIHACCKSSDVDKVEKLLCE-MEFKDVRADLFTYNTLIALYCKKGMHY 252
            G V+    +Y   +    ++    K     CE ME   + ADL   N ++  Y + G   
Sbjct: 653  GAVSPEKVMYTTFVDGLFRAGQ-SKAALYFCEDMEKNGLCADLIATNVILNGYSRMGKMA 711

Query: 253  EALAVQDRM-EREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTL 309
            +A  +   M     ISP + TYN L+HG+ ++  + +   L+  +   G  P+ +T  +L
Sbjct: 712  KAGDIFTMMWSGITISPSLATYNILLHGYAKKKNLSKCSNLYNIMMRTGIFPDKLTCHSL 771

Query: 310  IDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI 369
            I G+C++  L+  L+L + M   GV     T+N ++ K C+   +  A  L+N MN   I
Sbjct: 772  ILGFCKSAMLDVGLKLLKKMLLDGVAVDQCTFNMLIMKYCETDEVGKAFDLVNIMNLFDI 831

Query: 370  APDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKE 429
             PD  T +++I+   ++     +  + + MLE G + D+  Y AL++  C+   +  A +
Sbjct: 832  FPDMTTHDSIISVLSRVSTVQESHLLLHEMLERGCIPDRRQYIALVNRMCRMGHIHGAFK 891

Query: 430  LLFGMLDAGFSPSYCSYSWLVDGY--CNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRR 487
            L   M   G S    + S LV G   C K  E  L  +LD  + + L   ++ +  L+  
Sbjct: 892  LKDEMEALGISSGDVAESALVRGLAKCGKVEEAKL--VLDFMLRKSLIPTIATFTTLMHM 949

Query: 488  FCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMIT 547
            FC+ E +  A +L + M    +  D + Y  L       G+  +   +  ++ +R L   
Sbjct: 950  FCRNESLVEALKLKDTMDFCDVKLDVIAYNVLISGLCADGDVASALKLYKEIKQRGLWPN 1009

Query: 548  LKIY-RSFSASYAKDNEIL--DLFWSHVVDRGLMSKH 581
            +  Y     A +  D  +   ++    + +RG++S H
Sbjct: 1010 MTTYCILIDAIFTNDISLAKGEVLLKDLQERGVISGH 1046


>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
 gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
          Length = 836

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 139/482 (28%), Positives = 223/482 (46%), Gaps = 72/482 (14%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           +V+D + +  ++P +H  + ++N+  K    D    ++ KM +LGV  N+  YN +IH  
Sbjct: 242 EVYDFICLGGIIPDVHLFSTMINAFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGL 301

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTY-------------------------------- 238
           CKS  +D+  +   +M  + V   L TY                                
Sbjct: 302 CKSGRLDEAYRFKEKMVKEKVSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNE 361

Query: 239 ---NTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD 295
              NTLI  YCK G   EAL ++D M  +GISP+ VT NSLI GFC+  ++ +A  +  +
Sbjct: 362 VVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEE 421

Query: 296 IKGAT-------------------------------------PNHVTYTTLIDGYCRAND 318
           + G                                       PN    TTL+ G C+A  
Sbjct: 422 MIGRGLPINQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGK 481

Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT 378
             EA+ L   +  KG  P +VT N+++  LCK G +++  +LL +M E+ +  D +T NT
Sbjct: 482 QGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNT 541

Query: 379 LINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAG 438
           LI+  CK G      ++K  M++ G+  D +T+  L+HG C A ++D A  L       G
Sbjct: 542 LISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNG 601

Query: 439 FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQ 498
           + P+  +Y  ++DGYC  N  E    LL+E VS+ L ++  VY +LIR +C    ++ A 
Sbjct: 602 YVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAF 661

Query: 499 RLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASY 558
           RL + M+  G+L     Y+SL +     G       +LD+M +  L+  +  Y +    Y
Sbjct: 662 RLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGY 721

Query: 559 AK 560
           +K
Sbjct: 722 SK 723



 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 147/553 (26%), Positives = 263/553 (47%), Gaps = 52/553 (9%)

Query: 57  PSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIA--------LRD 108
           P  +  FF +  S    ++ + +S+  +IH+L  N     A+ +L ++          R+
Sbjct: 100 PKTALNFFHFV-SETCKFRFTARSYCVLIHLLVGNDLLSPARLLLIRLIDGKVPAFYARN 158

Query: 109 FLSTPSVLNALVKIHD---DPDGNSHVLSWLV-IFYANLKMTQDGL--QVFDQMRVHNLM 162
           F S    +  ++   +   +P     +   LV ++    K    G    VF  +    L 
Sbjct: 159 FESRHFEIAQIMADFNLVFEPVIGVKIADLLVHVYSTQFKHLGFGFAADVFSLLAKKGLF 218

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
           P L  CT LL+SL K       ++VY  +   G++ ++HL++ +I+A CK    D    L
Sbjct: 219 PSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMINAFCKGHREDDAIGL 278

Query: 223 LCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR 282
             +ME   V  ++ TYN +I   CK G   EA   +++M +E +SP ++TY+  I+G  +
Sbjct: 279 FSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSVFINGLIK 338

Query: 283 EGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVT 340
             ++ EA  + +++   G  PN V Y TLIDGYC+  ++ EAL++R+ M +KG+ P  VT
Sbjct: 339 LEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVT 398

Query: 341 YNSILRKLCKEGRIRDANRLLNEM-------NE--------------------------- 366
            NS+++  CK  +I  A  +L EM       N+                           
Sbjct: 399 LNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIREML 458

Query: 367 -KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMD 425
            + + P++    TL++  CK G    A+++  R+L  G + +  T  ALIHG CKA  M 
Sbjct: 459 LRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQ 518

Query: 426 IAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
              +LL  ML+ G      +Y+ L+ G C +   +   +L +E V +G+  D+  +  L+
Sbjct: 519 ETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLL 578

Query: 486 RRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
              C  +K+D A RL++  + NG + +   Y  +   Y +A + +   ++L+++  ++L 
Sbjct: 579 HGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLE 638

Query: 546 ITLKIYRSFSASY 558
           +   +Y S   +Y
Sbjct: 639 LNSVVYNSLIRAY 651



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 128/439 (29%), Positives = 218/439 (49%), Gaps = 19/439 (4%)

Query: 83  TMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYAN 142
           ++I    K+     A+N+LE++  R              +  +    S V++WL + +  
Sbjct: 401 SLIQGFCKSDQIGQAENVLEEMIGRG-------------LPINQGSFSMVINWLCLKFRF 447

Query: 143 LKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHL 202
           +      L    +M + NL P+    T L++ L K        +++ +++  G V NI  
Sbjct: 448 VT----ALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVT 503

Query: 203 YNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRME 262
            N LIH  CK+ ++ +  KLL +M  + +  D  TYNTLI+  CK+G   E   +++ M 
Sbjct: 504 SNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMV 563

Query: 263 REGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLE 320
           ++GI PDI T+N L+HG C   ++ EA RL+ + K  G  PN  TY  +IDGYC+AN +E
Sbjct: 564 KKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVE 623

Query: 321 EALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLI 380
           E   L   + +K +    V YNS++R  C  G +  A RL ++M  + +     T ++L+
Sbjct: 624 EGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLM 683

Query: 381 NAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFS 440
           +  C IG    A  + + M + GL+ +   Y  +I G+ K  +M+    +L  M      
Sbjct: 684 HGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIH 743

Query: 441 PSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRL 500
           P+  +Y+ ++DG+C     +   KLL+E   +G+  D   Y A     CK+ KV+ A ++
Sbjct: 744 PNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVEEAFKV 803

Query: 501 FNLMQGNGILGDSVIYTSL 519
            + M    +  D + YT+L
Sbjct: 804 CDEMSSGAVCLDEITYTTL 822



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 134/500 (26%), Positives = 225/500 (45%), Gaps = 54/500 (10%)

Query: 77  SLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWL 136
           SL ++   I+ L K +    A  +L++++   F+    V N L+      DG        
Sbjct: 325 SLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLI------DG-------- 370

Query: 137 VIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGV 196
              Y  +    + L++ D M    + P+      L+    K         V ++M+  G+
Sbjct: 371 ---YCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGL 427

Query: 197 VANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALA 256
             N   ++++I+  C           + EM  +++R +     TL++  CK G   EA+ 
Sbjct: 428 PINQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVE 487

Query: 257 VQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYC 314
           +  R+  +G  P+IVT N+LIHG C+ G M+E  +L RD+  +G   + +TY TLI G C
Sbjct: 488 LWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCC 547

Query: 315 RANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR--------------- 359
           +   ++E   L+E M  KG+ P + T+N +L  LC   +I +A+R               
Sbjct: 548 KEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVY 607

Query: 360 --------------------LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRM 399
                               LLNE+  KK+  ++V  N+LI AYC  G+  +A ++++ M
Sbjct: 608 TYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDM 667

Query: 400 LEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNE 459
              G++L   TY +L+HG C    +D AK LL  M   G  P+   Y+ ++ GY      
Sbjct: 668 KSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQM 727

Query: 460 EALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
             +  +L E  S  +  +   Y  +I  FCK  K   A +L N M   GIL D+V Y + 
Sbjct: 728 NKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAF 787

Query: 520 AYAYWRAGEPKACSDILDDM 539
                + G+ +    + D+M
Sbjct: 788 TNGLCKEGKVEEAFKVCDEM 807



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 95/317 (29%), Positives = 166/317 (52%), Gaps = 4/317 (1%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           GI PD+  ++++I+ FC+  R  +A  LF  ++  G  PN VTY  +I G C++  L+EA
Sbjct: 251 GIIPDVHLFSTMINAFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEA 310

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            R +E M  + V P ++TY+  +  L K  +I +AN +L EM+E    P+ V  NTLI+ 
Sbjct: 311 YRFKEKMVKEKVSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDG 370

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           YCK+G+ + A+K+++ ML  G+  +  T  +LI GFCK+ ++  A+ +L  M+  G   +
Sbjct: 371 YCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPIN 430

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             S+S +++  C K      L  + E + R L  +  +   L+   CK  K   A  L+ 
Sbjct: 431 QGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWC 490

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDN 562
            + G G + + V   +L +   +AG  +    +L DM  R L+     Y +  +   K+ 
Sbjct: 491 RLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEG 550

Query: 563 EILDLFW--SHVVDRGL 577
           ++ + F     +V +G+
Sbjct: 551 KVKEGFELKEEMVKKGI 567



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/255 (24%), Positives = 104/255 (40%), Gaps = 18/255 (7%)

Query: 43  IHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLE 102
           I+   L L+  C+   +  A   W E     Y  ++ ++  MI    K    +  +N+L 
Sbjct: 571 IYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLN 630

Query: 103 KIALRDFLSTPSVLNALVK-------------IHDDPDGNSHVLSW-----LVIFYANLK 144
           ++  +       V N+L++             + DD      +LS      L+    N+ 
Sbjct: 631 ELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIG 690

Query: 145 MTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYN 204
           +  D   + D+MR   L+P++   T ++   +K    + V  V ++M    +  N   Y 
Sbjct: 691 LVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYT 750

Query: 205 VLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMERE 264
           ++I   CK     +  KLL EM  K +  D  TYN      CK+G   EA  V D M   
Sbjct: 751 IMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVEEAFKVCDEMSSG 810

Query: 265 GISPDIVTYNSLIHG 279
            +  D +TY +LI G
Sbjct: 811 AVCLDEITYTTLIDG 825



 Score = 39.3 bits (90), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 42/223 (18%), Positives = 78/223 (34%), Gaps = 37/223 (16%)

Query: 392 AMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVD 451
           A  V + + + GL     T   L+    KA E+  + E+   +   G  P    +S +++
Sbjct: 205 AADVFSLLAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMIN 264

Query: 452 GYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQR------------ 499
            +C  + E+  + L  +    G+  +V  Y  +I   CK  ++D A R            
Sbjct: 265 AFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSP 324

Query: 500 -----------------------LFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDIL 536
                                  +   M   G + + V+Y +L   Y + G       I 
Sbjct: 325 SLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIR 384

Query: 537 DDMYRRRLMITLKIYRSFSASYAKDNEI--LDLFWSHVVDRGL 577
           DDM  + +        S    + K ++I   +     ++ RGL
Sbjct: 385 DDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGL 427


>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
 gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
          Length = 915

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 152/567 (26%), Positives = 270/567 (47%), Gaps = 21/567 (3%)

Query: 10  DTKFIKTISAIML-KGHWAKLLN-PNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWA 67
           D++FI T+  I+  K  W    N P I++ L    + KVLL   +      L+  FF + 
Sbjct: 39  DSQFIATLRNIVRGKESWKIAFNDPFISTKLKPHHVEKVLLLTLD---DTRLALRFFNFL 95

Query: 68  ESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPD 127
                N+ HS  S   +IH L     F  A ++L+ + LR  L    V  AL+   +  D
Sbjct: 96  -GLHKNFNHSTMSFCILIHALVNANLFWPASSLLQTLLLRGGLDPREVFEALLDCFEKCD 154

Query: 128 GNSHV-LSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWK 186
             S +    L+  Y   K   D + +F  MR   LMP +     +LN LAK R  DMV  
Sbjct: 155 FISSLGFDLLIQSYVQEKRMFDSVLIFRLMRQCELMPQVRTLGEVLNGLAKIRRVDMVLV 214

Query: 187 VYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYC 246
           ++ +++ +G+  +I++Y  +I + C+  +  K ++++  ME  D+  ++  YN LI   C
Sbjct: 215 LFGEILSMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRMESSDL--NVVVYNVLIHGLC 272

Query: 247 KKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR-------EGRMREARRLFRDIKGA 299
           K    +EA+ +++ + ++G++   VTY +L+ G C+        G M E   L     G 
Sbjct: 273 KNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIEL-----GF 327

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
            P     ++L++G  R   + +A  L   +   G  P +  YN+++  LCK+G+  +A  
Sbjct: 328 VPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAEL 387

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
           L  EM EK +  ++VT + LI+++C+ G   +A+    +M+ AG+ +  + Y +LI+G C
Sbjct: 388 LFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHC 447

Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
           K   +  A      M+D G  P+  SY+ L+ GYCNK       +L  E   +G+  +  
Sbjct: 448 KLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTY 507

Query: 480 VYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
            +  LI    +  ++  A RLF+ M    ++ + V Y  +   + + G      ++L+ M
Sbjct: 508 TFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQM 567

Query: 540 YRRRLMITLKIYRSFSASYAKDNEILD 566
            ++ L+     YR   +S      + +
Sbjct: 568 VQKGLVPDTYTYRPLISSLCSTGRVCE 594



 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 128/406 (31%), Positives = 204/406 (50%), Gaps = 2/406 (0%)

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           LV+    ++  + G  V D+M     +P   A + L+  L +       + +  ++ ++G
Sbjct: 302 LVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVG 361

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
            + ++ +YN LI++ CK    D+ E L  EM  K + A+  TY+ LI  +C++G    A+
Sbjct: 362 AMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAI 421

Query: 256 AVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGY 313
               +M   GI   +  YNSLI+G C+ G +  A   F ++  KG  P  V+YT+LI GY
Sbjct: 422 HFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGY 481

Query: 314 CRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDN 373
           C    L EA RL   M  KG+ P   T+ +++  L +  R+ DA RL +EM E+ + P+ 
Sbjct: 482 CNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNE 541

Query: 374 VTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFG 433
           VT N +I  +CK G+T  A ++ N+M++ GL+ D +TY+ LI   C    +  AK+ +  
Sbjct: 542 VTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDD 601

Query: 434 MLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEK 493
           +    F  +   YS L+ GYC +      L +  E V RG+ +D+  Y  LI    K++ 
Sbjct: 602 LHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQD 661

Query: 494 VDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
                 L   M    +  D VIYTS+   Y +AG  K    I D M
Sbjct: 662 TSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIM 707



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 125/509 (24%), Positives = 225/509 (44%), Gaps = 60/509 (11%)

Query: 80  SHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIF 139
           ++ T++  L K + F+    +++++    F+ T + L++LV+                  
Sbjct: 298 TYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSSLVE------------------ 339

Query: 140 YANLKMTQDGLQVFDQM-RVHNL--MPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGV 196
              L+     +  FD + RV  +  MP L     L+NSL KD   D    ++K+M + G+
Sbjct: 340 --GLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGL 397

Query: 197 VANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALA 256
            AN   Y++LI + C+   +D     L +M    ++  ++ YN+LI  +CK G    A++
Sbjct: 398 CANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVS 457

Query: 257 VQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGA----------------- 299
             D M  +G+ P +V+Y SLI G+C +G++ EA RL+ ++ G                  
Sbjct: 458 FFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALF 517

Query: 300 --------------------TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVV 339
                                PN VTY  +I+G+C+  +  +A  L   M  KG+ P   
Sbjct: 518 RANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTY 577

Query: 340 TYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRM 399
           TY  ++  LC  GR+ +A + +++++ +    + +  + L++ YCK G    A+ V   M
Sbjct: 578 TYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREM 637

Query: 400 LEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNE 459
           ++ G+ +D   Y  LI G  K ++      LL  M D    P    Y+ ++DGY    + 
Sbjct: 638 VKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSV 697

Query: 460 EALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
           +    + D  +  G   ++  Y  LI   CK   +D A+ L+  M  +    + V Y   
Sbjct: 698 KKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCF 757

Query: 520 AYAYWRAGEPKACSDILDDMYRRRLMITL 548
                R G  +    + +DM +  L  T+
Sbjct: 758 LDHLAREGSMEKAVQLHNDMLKGLLANTV 786



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 112/401 (27%), Positives = 207/401 (51%), Gaps = 7/401 (1%)

Query: 129 NSHVLSWLV--IFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWK 186
           N++  + L+  +F AN +MT D  ++FD+M   N+MP+     V++    K+  T   ++
Sbjct: 505 NTYTFTTLISALFRAN-RMT-DAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFE 562

Query: 187 VYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYC 246
           +  +MVQ G+V + + Y  LI + C +  V + +K + ++  +  + +   Y+ L+  YC
Sbjct: 563 LLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYC 622

Query: 247 KKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHV 304
           K+G   +AL V   M + G+  D+V Y  LI G  +E        L +++  +   P+ V
Sbjct: 623 KEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKV 682

Query: 305 TYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM 364
            YT++IDGY +A  +++A  + ++M  +G  P +VTY +++ +LCK G +  A  L  EM
Sbjct: 683 IYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEM 742

Query: 365 NEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEM 424
                 P++VT    ++   + G    A+++ N ML+ GL+ +  +Y  L+ GFCK   +
Sbjct: 743 LVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDMLK-GLLANTVSYNILVRGFCKLGRV 801

Query: 425 DIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRAL 484
           + A +LL  M+D    P   +YS ++   C + N +  ++  D  +++GL  D   Y  L
Sbjct: 802 EEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFL 861

Query: 485 IRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWR 525
           I   C   ++  A  L + M   G+  +   + SL++   R
Sbjct: 862 IYGCCIAGELGKAFELRDDMIRRGVKPNQATHKSLSHGASR 902



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 108/398 (27%), Positives = 196/398 (49%), Gaps = 3/398 (0%)

Query: 149 GLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIH 208
            +  FD+M    L P + + T L++           +++Y +M   G+  N + +  LI 
Sbjct: 455 AVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLIS 514

Query: 209 ACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISP 268
           A  +++ +    +L  EM  +++  +  TYN +I  +CK+G   +A  + ++M ++G+ P
Sbjct: 515 ALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVP 574

Query: 269 DIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLR 326
           D  TY  LI   C  GR+ EA++   D+  +    N + Y+ L+ GYC+   L +AL + 
Sbjct: 575 DTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVC 634

Query: 327 EVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKI 386
             M  +GV   +V Y  ++    KE        LL  M+++++ PD V   ++I+ Y K 
Sbjct: 635 REMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKA 694

Query: 387 GDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSY 446
           G    A  + + M++ G   +  TY  LI+  CKA  MD A+ L   ML +  +P++ +Y
Sbjct: 695 GSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTY 754

Query: 447 SWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQG 506
              +D    + + E  ++L ++ + +GL  +   Y  L+R FCK  +V+ A +L + M  
Sbjct: 755 CCFLDHLAREGSMEKAVQLHNDML-KGLLANTVSYNILVRGFCKLGRVEEATKLLDEMID 813

Query: 507 NGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL 544
           N I  D + Y+++ Y   R G      +  D M  + L
Sbjct: 814 NAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGL 851



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 103/291 (35%), Positives = 157/291 (53%), Gaps = 5/291 (1%)

Query: 169 TVLLNSLAKD-RLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEME 227
           + LL+   K+ RL D +  V ++MV+ GV  ++  Y VLI    K  D   V  LL  M 
Sbjct: 615 SALLHGYCKEGRLRDALG-VCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMH 673

Query: 228 FKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMR 287
            + +R D   Y ++I  Y K G   +A  + D M  EG +P+IVTY +LI+  C+ G M 
Sbjct: 674 DQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMD 733

Query: 288 EARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSIL 345
           +A  L+++  +  +TPNHVTY   +D   R   +E+A++L   M  KG+    V+YN ++
Sbjct: 734 KAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDML-KGLLANTVSYNILV 792

Query: 346 RKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLM 405
           R  CK GR+ +A +LL+EM +  I PD +T +T+I   C+ G+   A++  + ML  GL 
Sbjct: 793 RGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLK 852

Query: 406 LDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNK 456
            D   Y  LI+G C A E+  A EL   M+  G  P+  ++  L  G   K
Sbjct: 853 PDTLAYNFLIYGCCIAGELGKAFELRDDMIRRGVKPNQATHKSLSHGASRK 903



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/137 (24%), Positives = 65/137 (47%), Gaps = 1/137 (0%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           +  +Q+ + M +  L+ +  +  +L+    K    +   K+  +M+   +  +   Y+ +
Sbjct: 768 EKAVQLHNDM-LKGLLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTI 826

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           I+ CC+  ++D   +    M  K ++ D   YN LI   C  G   +A  ++D M R G+
Sbjct: 827 IYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFELRDDMIRRGV 886

Query: 267 SPDIVTYNSLIHGFCRE 283
            P+  T+ SL HG  R+
Sbjct: 887 KPNQATHKSLSHGASRK 903


>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
          Length = 778

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 154/567 (27%), Positives = 263/567 (46%), Gaps = 65/567 (11%)

Query: 12  KFIKTISAIM---------LKGHWAKLLNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCA 62
           + I+TI+ I+         L  +  +L  P + S L+S    K L++       P++  +
Sbjct: 22  ELIQTITTILASNNMPLQALNTYIPQLTPPLVLSILSS----KTLISR------PNILIS 71

Query: 63  FFKWAESAVPNYKHSLQSHWTMIHILT-KNKHFKSAQNMLEKIALRDFLSTPSVLNALVK 121
           FFKWA++ +P + H+       +      ++ F  A+++L       F++T    +  + 
Sbjct: 72  FFKWAQTNLPTFPHNSLPSLLSLLPSLFSHRKFSDAKSLL-----LGFIATDRRHDLHLS 126

Query: 122 IHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLT 181
           I      +  +L   +  Y          Q+F +M+   L P+L  C  LLNSL +   +
Sbjct: 127 ILRLTSPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSS 186

Query: 182 DMV---WKVYKKMVQLGVVANIHLYNVLIH------------------------------ 208
             V    + +   ++LG+V N++ +N++I+                              
Sbjct: 187 HSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTY 246

Query: 209 -----ACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER 263
                A CK   +     LL +M+ + +  +  TYN L+  YCK G   EA  V + M +
Sbjct: 247 NTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQ 306

Query: 264 EGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGAT--PNHVTYTTLIDGYCRANDLEE 321
             + PD+ TYN LI+G C EGR+ EA +L  +++     P+ V+Y TLI+G    + + E
Sbjct: 307 NNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISE 366

Query: 322 ALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
           A +L E M+ KGV P  VT+N +++  CKEG++ DA+  + +M E   +PD VT NTLIN
Sbjct: 367 AFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLIN 426

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
            YCK G+   A +  + M    + +D  T   ++   C+ K+++ A +LL      G+  
Sbjct: 427 GYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFI 486

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
              SY  L+ GY    N +  LKL DE   + +      Y  +I   C+  K + A    
Sbjct: 487 DEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKL 546

Query: 502 NLMQGNGILGDSVIYTSLAYAYWRAGE 528
           N +  +G+L D   Y ++ + Y R G+
Sbjct: 547 NELLESGLLPDETTYNTILHGYCREGD 573



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 121/432 (28%), Positives = 210/432 (48%), Gaps = 37/432 (8%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D   +   M+   L+P+ +   +L+    K         V + M Q  ++ ++  YN+LI
Sbjct: 261 DARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLI 320

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           +  C    +++  KL  EME   +  D+ +YNTLI    +     EA  + + M  +G+ 
Sbjct: 321 NGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVK 380

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRL 325
           P+ VT+N ++  +C+EG+M +A      ++  G +P+ VTY TLI+GYC+A ++ EA R 
Sbjct: 381 PNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRT 440

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLL------------------------ 361
            + M  K +    VT N+ILR LC+E ++ +A +LL                        
Sbjct: 441 MDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFK 500

Query: 362 -----------NEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
                      +EM EK+I P  VT N +I   C+ G T  A+   N +LE+GL+ D+ T
Sbjct: 501 DGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETT 560

Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFV 470
           Y  ++HG+C+  +++ A +    M++  F P   + + L+ G C +   E  LKL + +V
Sbjct: 561 YNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWV 620

Query: 471 SRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPK 530
           S+G  +D   Y  LI   CK+ ++D A  L + M+   +  D   Y ++  A   +G  +
Sbjct: 621 SKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIR 680

Query: 531 ACSDILDDMYRR 542
              + +  M  +
Sbjct: 681 EAEEFMSKMLEK 692



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 95/311 (30%), Positives = 155/311 (49%), Gaps = 5/311 (1%)

Query: 239 NTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR---EGRMREARRLFRD 295
           +T I  Y + G  + A  +  +M+R  + P+++T N+L++   R      +  +R  F D
Sbjct: 139 DTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFND 198

Query: 296 -IK-GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGR 353
            IK G  PN  T+  +I GYC  N  ++A+    VM      P  VTYN+IL  LCK+GR
Sbjct: 199 AIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGR 258

Query: 354 IRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKA 413
           + DA  LL +M  + + P+  T N L+  YCK+G    A  V   M +  L+ D +TY  
Sbjct: 259 LGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNM 318

Query: 414 LIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
           LI+G C    ++ A +L   M +    P   SY+ L++G    +      KLL+E   +G
Sbjct: 319 LINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKG 378

Query: 474 LCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACS 533
           +  +   +  +++ +CK+ K+D A      M+ +G   D V Y +L   Y +AG      
Sbjct: 379 VKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAF 438

Query: 534 DILDDMYRRRL 544
             +D+M R+ +
Sbjct: 439 RTMDEMGRKNM 449



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 112/443 (25%), Positives = 192/443 (43%), Gaps = 31/443 (6%)

Query: 53  CCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLST 112
           C     +S AF    E +    K +  +H  M+    K      A N + K+    F   
Sbjct: 358 CLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGF--- 414

Query: 113 PSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLL 172
                        PD  ++  + L+  Y       +  +  D+M   N+         +L
Sbjct: 415 ------------SPDCVTY--NTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTIL 460

Query: 173 NSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVR 232
            +L +++  +  +K+     + G   +   Y  LI    K  +VD+  KL  EM+ K++ 
Sbjct: 461 RTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEII 520

Query: 233 ADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRL 292
               TYN +I   C+ G   +A++  + +   G+ PD  TYN+++HG+CREG + +A + 
Sbjct: 521 PSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQF 580

Query: 293 FRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
              +      P+  T   L+ G C    LE+AL+L     +KG     VTYN+++  LCK
Sbjct: 581 HNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCK 640

Query: 351 EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
           EGR+ DA  LL+EM EK++ PD+ T N +I A    G    A +  ++MLE G +  Q  
Sbjct: 641 EGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLPXQVL 700

Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFV 470
                       ++D  + ++          S  +YS  +   C +   +  +++  E  
Sbjct: 701 ------------QLDXNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESK 748

Query: 471 SRGLCVDVSVYRALIRRFCKKEK 493
            +G+ VD S Y  L+    K+ K
Sbjct: 749 QKGITVDKSTYINLMDGLIKRRK 771



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 86/367 (23%), Positives = 152/367 (41%), Gaps = 44/367 (11%)

Query: 44  HKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEK 103
           +  L+N Y  C   ++  AF    E    N K    +  T++  L + K  + A  +L  
Sbjct: 421 YNTLINGY--CKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSS 478

Query: 104 IALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMP 163
              R +         L+ +    DGN                    L+++D+M+   ++P
Sbjct: 479 ARKRGYFIDEVSYGTLI-VGYFKDGN----------------VDRALKLWDEMKEKEIIP 521

Query: 164 HLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLL 223
                  ++  L +   T+       ++++ G++ +   YN ++H  C+  DV+K  +  
Sbjct: 522 STVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFH 581

Query: 224 CEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCRE 283
            +M     + D+FT N L+   C +GM  +AL + +    +G + D VTYN+LI   C+E
Sbjct: 582 NKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKE 641

Query: 284 GRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPG---- 337
           GR+ +A  L  ++  K   P+H TY  +I     +  + EA      M  KG  P     
Sbjct: 642 GRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLPXQVLQ 701

Query: 338 -------------------VVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT 378
                               V Y+  +++LC EG+ +DA R+  E  +K I  D  T   
Sbjct: 702 LDXNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYIN 761

Query: 379 LINAYCK 385
           L++   K
Sbjct: 762 LMDGLIK 768


>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
          Length = 1099

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 126/382 (32%), Positives = 191/382 (50%), Gaps = 2/382 (0%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           + L++F  M   N  P +   TVL+ +L+          ++ +M + G   N+H Y VLI
Sbjct: 282 EALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLI 341

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
              CK + +D+  K+L EM  K +   + TYN LI  YCK+GM  +A  + D ME     
Sbjct: 342 DGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCG 401

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
           P+  TYN LI G C++ ++ +A  L   +  +  +P+ +TY +LI G C+ NDLE A RL
Sbjct: 402 PNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRL 461

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
             +M   G+ P   TY+  +  LCKEGR+ +A  L + +  K +  + V    LI+ YCK
Sbjct: 462 LSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCK 521

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
           +G    A  +  RML    + + +TY  LI G CK K+M  A  L+  ML  G  P+  +
Sbjct: 522 VGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVT 581

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+ L+         +  LK+ +  VS G   DV  Y A +  +  +  ++    +   M 
Sbjct: 582 YTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMN 641

Query: 506 GNGILGDSVIYTSLAYAYWRAG 527
             GIL D V YT L   Y R G
Sbjct: 642 EEGILPDLVTYTVLIDGYARLG 663



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 177/602 (29%), Positives = 274/602 (45%), Gaps = 82/602 (13%)

Query: 19  AIMLKGHWAKLLNPNIASSLTS-TAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHS 77
           +I+ + +W K  +P++   L S T  H   L  +N    P  + +FF W  +  P +KH+
Sbjct: 46  SILSRPNWQK--HPSLRKLLPSLTPSHVSSLFAFNL--DPQTALSFFNWI-ALRPGFKHN 100

Query: 78  LQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLV 137
           + S+ +M++IL + +    A    EKI +       S++ +   I D       VL  L 
Sbjct: 101 VHSYSSMLNILIRARLLGVA----EKIRI-------SMIKSCCSIED-------VLFVLE 142

Query: 138 IFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVV 197
           +F    KM  DG   F         P L     +L SL+K  L D +  VY +++   + 
Sbjct: 143 VFR---KMNADGEFKFK--------PTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQIS 191

Query: 198 ANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCK-KGMH--YEA 254
            NI+ +N +++  CK  +V + E    ++    +  D FTY +LI  +C+ KG+   YE 
Sbjct: 192 PNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEV 251

Query: 255 LAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI------------------ 296
             +   M ++G   + V+Y +LIHG C  GR+ EA +LF D+                  
Sbjct: 252 FLI---MPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYA 308

Query: 297 -------------------KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPG 337
                              KG  PN  TYT LIDG C+ N ++EA ++   M+ KG+ P 
Sbjct: 309 LSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPS 368

Query: 338 VVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKN 397
           VVTYN+++   CKEG I DA  +L+ M      P+  T N LI   CK      AM + N
Sbjct: 369 VVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLN 428

Query: 398 RMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKN 457
           +MLE  L     TY +LIHG CK  +++ A  LL  M + G  P   +YS  +D  C + 
Sbjct: 429 KMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEG 488

Query: 458 NEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYT 517
             E    L D   ++G+  +  +Y ALI  +CK  K+D A  L   M  +  L +S  Y 
Sbjct: 489 RVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYN 548

Query: 518 SLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKD---NEILDLFWSHVVD 574
            L     +  + K  S ++  M    +  T+  Y        KD   +  L +F +H+V 
Sbjct: 549 VLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVF-NHMVS 607

Query: 575 RG 576
            G
Sbjct: 608 LG 609



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 125/469 (26%), Positives = 204/469 (43%), Gaps = 45/469 (9%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           + L +F++M+     P++H  TVL++ L K+   D   K+  +M + G++ ++  YN LI
Sbjct: 317 EALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALI 376

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
              CK   +D   ++L  ME      +  TYN LI   CKK   ++A+A+ ++M    +S
Sbjct: 377 DGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLS 436

Query: 268 PDIVTYNSLIHG-----------------------------------FCREGRMREARRL 292
           P ++TYNSLIHG                                    C+EGR+ EA  L
Sbjct: 437 PSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTL 496

Query: 293 FRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
           F  +K  G   N V YT LIDGYC+   ++ A  L E M      P   TYN ++  LCK
Sbjct: 497 FDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCK 556

Query: 351 EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
           E ++++A+ L+ +M    + P  VT   LI    K G    A+KV N M+  G   D  T
Sbjct: 557 EKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCT 616

Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFV 470
           Y A +H +     ++   +++  M + G  P   +Y+ L+DGY            L   V
Sbjct: 617 YTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMV 676

Query: 471 SRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPK 530
             G    + +   LI+         +  R+       GI   S + +      W+  E +
Sbjct: 677 DTGCKPSLYIVSILIKNL------SHENRMKETRSEIGIDSVSNVNSVDIADVWKTLEYE 730

Query: 531 ACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDL--FWSHVVDRGL 577
               + + M      I + IY +  A + +   + +      H+ +RG+
Sbjct: 731 IALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGM 779



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 103/458 (22%), Positives = 206/458 (44%), Gaps = 27/458 (5%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           NS+  + L+      K  ++   +  +M    + P +   T+L+  + KD   D   KV+
Sbjct: 543 NSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVF 602

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
             MV LG   ++  Y   +HA      +++V+ ++ +M  + +  DL TY  LI  Y + 
Sbjct: 603 NHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARL 662

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYTT 308
           G+ + A      M   G  P +   + LI     E RM+E R    +I   + ++V    
Sbjct: 663 GLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRS---EIGIDSVSNVNSVD 719

Query: 309 LIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKK 368
           + D + +  + E AL+L E M   G    V  Y +++   C++ R+ +A  L++ M E+ 
Sbjct: 720 IADVW-KTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERG 778

Query: 369 IAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAK 428
           ++P     N+L++  CK+G  A A+++ + M+E GL+    +YK L+ G       + AK
Sbjct: 779 MSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAK 838

Query: 429 ELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRF 488
            +  G+L  G++    ++  L+DG   ++  +   +L+D    +       +  A + R 
Sbjct: 839 AVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKDATAQADIACAALMRL 898

Query: 489 CKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITL 548
                   A      ++ + + G SV +          GE    S +++++    + + L
Sbjct: 899 AAANSTKGA------LEDHELRGLSVNH----------GELTQLSGLVNNL----ISVGL 938

Query: 549 KIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKEM 586
               +F+A   +DN +++  W    D G++  H + ++
Sbjct: 939 GCVATFAAVVLEDNVLMEKAWQ---DIGILRAHAWNKI 973


>gi|147803305|emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]
          Length = 1356

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 141/513 (27%), Positives = 241/513 (46%), Gaps = 4/513 (0%)

Query: 59  LSCAFFKWA-ESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLN 117
           L+  F KW  +      KH    +    HIL K + + SA+++L  +     + + S+  
Sbjct: 92  LALKFLKWVIKQPGLELKHLTHMYCLTAHILVKARMYDSAKSILRHLCQMG-IGSKSIFG 150

Query: 118 ALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAK 177
           AL+  +   +    V   L+  Y    M    ++ F+ + +    P ++ C ++L S+ K
Sbjct: 151 ALMDTYPLCNSIPSVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVK 210

Query: 178 DRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFT 237
           D+ T++VW ++++M   G+  N+  +N+LI+  C   ++ K   LL +ME       + T
Sbjct: 211 DKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVT 270

Query: 238 YNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK 297
           YNTL+  YCKKG +  A+ + D M  +GI  D+ TYN  I   C   R  +A  L + ++
Sbjct: 271 YNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMR 330

Query: 298 GA--TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIR 355
               +PN VTY TLI+G+ +   +  A ++   M+   + P  VTYN+++   C  G   
Sbjct: 331 KEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFE 390

Query: 356 DANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALI 415
           +A RLL+ M    +  + VT  TL+N  CK      A ++  RM    +++    Y  LI
Sbjct: 391 EALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLI 450

Query: 416 HGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLC 475
            G CK   +D A +L+  M   G +P   +YS L++G+C   N ++  +++      GL 
Sbjct: 451 DGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLV 510

Query: 476 VDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDI 535
           ++  +Y  LI  FC+   V  A +++ +M  NG   D      L  +  R G+       
Sbjct: 511 LNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKF 570

Query: 536 LDDMYRRRLMITLKIYRSFSASYAKDNEILDLF 568
           L  M R  L+     Y      Y    + L+ F
Sbjct: 571 LCHMSRIGLVPNSITYDCIINGYGSIGDPLNAF 603



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 104/377 (27%), Positives = 190/377 (50%), Gaps = 5/377 (1%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           ++ ++MRV++++    A TVL++ L K+ + D   ++   M + GV  ++  Y+ LI+  
Sbjct: 429 RLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGF 488

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           C+  ++   ++++C M    +  +   Y+TLI  +C+ G   EA+ V   M   G   D 
Sbjct: 489 CRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADH 548

Query: 271 VTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREV 328
            T N L+   CR+G++ EA +    +   G  PN +TY  +I+GY    D   A    + 
Sbjct: 549 FTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDD 608

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M   G +P   TY S+L+ LCK G + +A + LN ++    A D+V  NTL+   CK G+
Sbjct: 609 MIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGN 668

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFG--MLDAGFSPSYCSY 446
              A+ + ++M++  ++ D +TY +L+ G C+ K   +    LFG  M      P++  Y
Sbjct: 669 LHEAVALFDKMVQNNVLPDSYTYSSLLTGLCR-KGKAVTAVCLFGTAMGRGTLFPNHVMY 727

Query: 447 SWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQG 506
           + LVDG     + +A     +E + +G C D   + A+I    ++ ++  A   F+ M+ 
Sbjct: 728 TCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRW 787

Query: 507 NGILGDSVIYTSLAYAY 523
            G+  +   Y  L + +
Sbjct: 788 WGVCPNLATYNILLHGF 804



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 119/473 (25%), Positives = 211/473 (44%), Gaps = 19/473 (4%)

Query: 84  MIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANL 143
           +I+ L    + K A N+L+++    F+ T    N L             L+W    Y   
Sbjct: 239 LINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTL-------------LNW----YCKK 281

Query: 144 KMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLY 203
              +  +++ D M    +   +    V +++L  +  +   + + KKM +  +  N   Y
Sbjct: 282 GRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTY 341

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER 263
           N LI+   K   +    ++  EM   D+  +  TYN LI  +C  G   EAL + D ME 
Sbjct: 342 NTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEA 401

Query: 264 EGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEE 321
            G+  + VTY +L++G C+  +   A+RL   ++       H+ YT LIDG C+   L+E
Sbjct: 402 AGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDE 461

Query: 322 ALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
           A++L   M   GV P V+TY+S++   C+ G I+ A  ++  M    +  + +  +TLI 
Sbjct: 462 AVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIY 521

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
            +C+ G+   AMKV   M   G   D FT   L+   C+  ++  A++ L  M   G  P
Sbjct: 522 NFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVP 581

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
           +  +Y  +++GY +  +        D+ +  G       Y +L++  CK   +  A++  
Sbjct: 582 NSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFL 641

Query: 502 NLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSF 554
           N +       DSV+Y +L     ++G       + D M +  ++     Y S 
Sbjct: 642 NRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSL 694



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 108/420 (25%), Positives = 186/420 (44%), Gaps = 38/420 (9%)

Query: 185  WKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIAL 244
            +  +  M++ G   +   Y  L+   CK  ++ + +K L  + +     D   YNTL+A 
Sbjct: 603  FSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAE 662

Query: 245  YCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGAT---P 301
             CK G  +EA+A+ D+M +  + PD  TY+SL+ G CR+G+   A  LF    G     P
Sbjct: 663  TCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFP 722

Query: 302  NHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDAN--- 358
            NHV YT L+DG  +A   + A    E M  KG  P  V +N+I+    + G++  AN   
Sbjct: 723  NHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFF 782

Query: 359  --------------------------------RLLNEMNEKKIAPDNVTCNTLINAYCKI 386
                                             L + M  + I PD +T ++LI    K 
Sbjct: 783  STMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKS 842

Query: 387  GDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSY 446
            G     +K+  +M+  G + DQFT+  LI+ + ++ +M  A +L+  M   G  P   +Y
Sbjct: 843  GIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTY 902

Query: 447  SWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQG 506
            + + +G   K+       +L E +  G+    + Y  LI   C+   +  A +L + M+ 
Sbjct: 903  NHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEA 962

Query: 507  NGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
             G     V  +++       G+ +    +LD M R RL+ T+  + +    + +D +I +
Sbjct: 963  LGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAE 1022



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 100/324 (30%), Positives = 155/324 (47%), Gaps = 2/324 (0%)

Query: 153  FDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCK 212
            F  MR   + P+L    +LL+  +K +       +Y  M++ G+  +   ++ LI    K
Sbjct: 782  FSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSK 841

Query: 213  SSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVT 272
            S   D   KLL +M  +   AD FT+N LI  Y + G   +A  + + M   G+ PD  T
Sbjct: 842  SGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDT 901

Query: 273  YNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMA 330
            YN + +G  ++   RE+  +  ++   G  P H  Y TLI+G CR  D++ A +L++ M 
Sbjct: 902  YNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEME 961

Query: 331  AKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTA 390
            A G     V  ++++R L   G+  DA  +L+ M   ++ P   T  TL++ +C+    A
Sbjct: 962  ALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIA 1021

Query: 391  SAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLV 450
             A+K+K  M   GL LD   Y  LI G C   +   A EL   M      P+  +Y+ LV
Sbjct: 1022 EALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLV 1081

Query: 451  DGYCNKNNEEALLKLLDEFVSRGL 474
            D     NN     KLL +   RGL
Sbjct: 1082 DAISAANNLIQGEKLLTDLQERGL 1105



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 121/540 (22%), Positives = 212/540 (39%), Gaps = 80/540 (14%)

Query: 129  NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
            NS     ++  Y ++    +    FD M      P       LL  L K        K  
Sbjct: 582  NSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFL 641

Query: 189  KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
             ++  +    +  +YN L+   CKS ++ +   L  +M   +V  D +TY++L+   C+K
Sbjct: 642  NRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRK 701

Query: 249  GMHYEALAVQ------------------------------------DRMEREGISPDIVT 272
            G    A+ +                                     + M ++G  PD V 
Sbjct: 702  GKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVA 761

Query: 273  YNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMA 330
            +N++I    R G+M +A   F  ++  G  PN  TY  L+ G+ +   L   L L   M 
Sbjct: 762  FNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMM 821

Query: 331  AKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTA 390
             +G++P  +T++S++  L K G      +LL +M  +    D  T N LIN Y + G   
Sbjct: 822  REGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMR 881

Query: 391  SAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLV 450
             A  + N M   G+  D+ TY  + +G  K      +  +L  ML+ G  P +  Y  L+
Sbjct: 882  KAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLI 941

Query: 451  DGYCNKNNEEALLKLLDEFVSRG-----------------------------------LC 475
            +G C   + +   KL DE  + G                                   L 
Sbjct: 942  NGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLL 1001

Query: 476  VDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDI 535
              ++ +  L+ RFC+  K+  A +L  +M+  G+  D V Y  L       G+  A  ++
Sbjct: 1002 PTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFEL 1061

Query: 536  LDDMYRRRLMITLKIYRSFSASYAKDNEIL--DLFWSHVVDRGLMS-----KHIFKEMQL 588
             ++M  R L   +  Y     + +  N ++  +   + + +RGL+S     +H+ KE+ +
Sbjct: 1062 YEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQERGLISWGGSTQHLDKELTV 1121


>gi|449451888|ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
 gi|449529106|ref|XP_004171542.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
          Length = 783

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 164/564 (29%), Positives = 259/564 (45%), Gaps = 46/564 (8%)

Query: 8   NSDTKFIKTISAIMLKGHWAKLLNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWA 67
           N + + I+TI+ I+     +       A+ L+ + I  +  +     H PS+    FKWA
Sbjct: 16  NLEQQLIQTITTILNATKPSLSALAPYAAHLSPSLISSIFASKALSSH-PSVLLNVFKWA 74

Query: 68  ESAVPNYKHSLQSHWTMIHILT----KNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIH 123
           +  VP++     +  + +  L     ++  F  A+++L      D       L  L    
Sbjct: 75  QKHVPSFSSPPNNSLSSLLTLLPSLFRHYMFSDAKSLLISFISSDRQHELHKL-ILHPTR 133

Query: 124 DDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDM 183
           D P+ +  +L   +  Y  +       Q+F++M+  N  P+L  C  L+NSL +   +  
Sbjct: 134 DLPEPSKELLDTSIGAYVQMDQPHLATQIFNKMKRLNYRPNLLTCNTLMNSLVRYPSSSS 193

Query: 184 VW---KVYKKMVQLGVVANIHLYNVLIHACCKSSDV----DKVEK--------------- 221
           +    +V K  ++LGVV N + +N+LI+  C  S V    D V K               
Sbjct: 194 ILLARQVLKDSIKLGVVPNTNSFNILIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNT 253

Query: 222 ----------------LLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
                           LL +M+ K +  +  TYN L+  YC+ G+  EA  V + M R  
Sbjct: 254 ILDALLKRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNN 313

Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEAL 323
           + P + TYN L++GFC +G++ EA R+  +++     P+ VTY TLIDG  +  D  E  
Sbjct: 314 LLPTVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVY 373

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
            L E M  KGV    VTYN IL+ +CK+G + +A   L++M E  ++PD VT NTLI AY
Sbjct: 374 SLIEEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAY 433

Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY 443
           CK G    A ++ + M   GL +D +T   ++H  C  K++D A  LL      G+    
Sbjct: 434 CKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDE 493

Query: 444 CSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNL 503
            SY  L+ GY      +  L L DE   R +      Y ++I   C+  KVD A    N 
Sbjct: 494 VSYGILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNE 553

Query: 504 MQGNGILGDSVIYTSLAYAYWRAG 527
           M  NG++ D   Y  + + +   G
Sbjct: 554 MLENGLVPDETTYNIIIHGFCLEG 577



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 114/421 (27%), Positives = 195/421 (46%), Gaps = 37/421 (8%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N H  + LV  Y  L + ++  +V + M  +NL+P +    +L+N    D   D  +++ 
Sbjct: 282 NKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIR 341

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
            +M ++ V+ ++  YN LI  C +  D  +V  L+ EM+ K V+ +  TYN ++   CKK
Sbjct: 342 DEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKK 401

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI------------ 296
           G   EA    D+ME  G+SPD VTYN+LI  +C+ G+M +A R+  ++            
Sbjct: 402 GNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTL 461

Query: 297 -------------------------KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAA 331
                                    +G   + V+Y  LI GY +    + AL L + M  
Sbjct: 462 NTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEMKE 521

Query: 332 KGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTAS 391
           + + P  +TYNS++  LC+  ++  A   LNEM E  + PD  T N +I+ +C  G+   
Sbjct: 522 RQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEK 581

Query: 392 AMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVD 451
           A +  N M+E     D +T   L+ G C+   ++ A +L   ++  G      +Y+ ++ 
Sbjct: 582 AFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTIIS 641

Query: 452 GYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILG 511
             C +   E    LL E  ++ L  D   Y+ +I       ++  A+     M  +GI+ 
Sbjct: 642 SLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAALTDAGRIKEAEEFTLKMVESGIVH 701

Query: 512 D 512
           D
Sbjct: 702 D 702



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 132/492 (26%), Positives = 213/492 (43%), Gaps = 74/492 (15%)

Query: 115 VLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNS 174
           VL   +K+   P+ NS   + L+  Y      +D L   ++M     +P   +   +L++
Sbjct: 200 VLKDSIKLGVVPNTNS--FNILIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILDA 257

Query: 175 LAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRAD 234
           L K RL      +   M   G+  N H YN+L+   C+   + +  K++  M   ++   
Sbjct: 258 LLKRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPT 317

Query: 235 LFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHG--------------- 279
           ++TYN L+  +C  G   EA  ++D ME+  + PD+VTYN+LI G               
Sbjct: 318 VWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIE 377

Query: 280 --------------------FCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRAN 317
                                C++G M EA      ++  G +P+ VTY TLI  YC+A 
Sbjct: 378 EMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAG 437

Query: 318 DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLL---------------- 361
            + +A R+ + M +KG+     T N+IL  LC E ++ +A  LL                
Sbjct: 438 KMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYG 497

Query: 362 -------------------NEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEA 402
                              +EM E++I P  +T N++I   C+      A+   N MLE 
Sbjct: 498 ILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLEN 557

Query: 403 GLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEAL 462
           GL+ D+ TY  +IHGFC    ++ A +    M++  F P   + + L+ G C +   E  
Sbjct: 558 GLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKA 617

Query: 463 LKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYA 522
           LKL +  VS+G  +DV  Y  +I   CK+ K + A  L   M+   +  D   Y  +  A
Sbjct: 618 LKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAA 677

Query: 523 YWRAGEPKACSD 534
              AG  K   +
Sbjct: 678 LTDAGRIKEAEE 689



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 92/347 (26%), Positives = 157/347 (45%), Gaps = 14/347 (4%)

Query: 149 GLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIH 208
             ++ D+M    L         +L+ L  ++  D  + +     + G + +   Y +LI 
Sbjct: 442 AFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILIL 501

Query: 209 ACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISP 268
              K    D+   L  EM+ + +     TYN++I   C+     +A+   + M   G+ P
Sbjct: 502 GYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVP 561

Query: 269 DIVTYNSLIHGFCREGRMREARRLFRDIKGA--TPNHVTYTTLIDGYCRANDLEEALRLR 326
           D  TYN +IHGFC EG + +A +   ++      P+  T   L+ G CR   LE+AL+L 
Sbjct: 562 DETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKLF 621

Query: 327 EVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKI 386
             + +KG    VVTYN+I+  LCKEG+  +A  LL EM  KK+ PD  T   +I A    
Sbjct: 622 NTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAALTDA 681

Query: 387 GDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSY 446
           G    A +   +M+E+G++ DQ              ++   + +L   +   F     +Y
Sbjct: 682 GRIKEAEEFTLKMVESGIVHDQNL------------KLGKGQNVLTSEVSEHFDFKSIAY 729

Query: 447 SWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEK 493
           S  ++  CN++  +  + L  E    G+ ++   Y  L+    K+ K
Sbjct: 730 SDQINELCNQHKYKDAMHLFVEVTKEGVALNKYTYLNLMEGLIKRRK 776


>gi|359493281|ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
            [Vitis vinifera]
          Length = 2037

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 141/513 (27%), Positives = 241/513 (46%), Gaps = 4/513 (0%)

Query: 59   LSCAFFKWA-ESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLN 117
            L+  F KW  +      KH    +    HIL K + + SA+++L  +     + + S+  
Sbjct: 843  LALKFLKWVIKQPGLELKHLTHMYCLTAHILVKARMYDSAKSILRHLCQMG-IGSKSIFG 901

Query: 118  ALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAK 177
            AL+  +   +    V   L+  Y    M    ++ F+ + +    P ++ C ++L S+ K
Sbjct: 902  ALMDTYPLCNSIPSVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVK 961

Query: 178  DRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFT 237
            D+ T++VW ++++M   G+  N+  +N+LI+  C   ++ K   LL +ME       + T
Sbjct: 962  DKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVT 1021

Query: 238  YNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK 297
            YNTL+  YCKKG +  A+ + D M  +GI  D+ TYN  I   C   R  +A  L + ++
Sbjct: 1022 YNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMR 1081

Query: 298  GA--TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIR 355
                +PN VTY TLI+G+ +   +  A ++   M+   + P  VTYN+++   C  G   
Sbjct: 1082 KEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFE 1141

Query: 356  DANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALI 415
            +A RLL+ M    +  + VT  TL+N  CK      A ++  RM    +++    Y  LI
Sbjct: 1142 EALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLI 1201

Query: 416  HGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLC 475
             G CK   +D A +L+  M   G +P   +YS L++G+C   N ++  +++      GL 
Sbjct: 1202 DGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLV 1261

Query: 476  VDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDI 535
            ++  +Y  LI  FC+   V  A +++ +M  NG   D      L  +  R G+       
Sbjct: 1262 LNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKF 1321

Query: 536  LDDMYRRRLMITLKIYRSFSASYAKDNEILDLF 568
            L  M R  L+     Y      Y    + L+ F
Sbjct: 1322 LCHMSRIGLVPNSITYDCIINGYGSIGDPLNAF 1354



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 104/379 (27%), Positives = 191/379 (50%), Gaps = 5/379 (1%)

Query: 151  QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
            ++ ++MRV++++    A TVL++ L K+ + D   ++   M + GV  ++  Y+ LI+  
Sbjct: 1180 RLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGF 1239

Query: 211  CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
            C+  ++   ++++C M    +  +   Y+TLI  +C+ G   EA+ V   M   G   D 
Sbjct: 1240 CRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADH 1299

Query: 271  VTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREV 328
             T N L+   CR+G++ EA +    +   G  PN +TY  +I+GY    D   A    + 
Sbjct: 1300 FTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDD 1359

Query: 329  MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
            M   G +P   TY S+L+ LCK G + +A + LN ++    A D+V  NTL+   CK G+
Sbjct: 1360 MIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGN 1419

Query: 389  TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFG--MLDAGFSPSYCSY 446
               A+ + ++M++  ++ D +TY +L+ G C+ K   +    LFG  M      P++  Y
Sbjct: 1420 LHEAVALFDKMVQNNVLPDSYTYSSLLTGLCR-KGKAVTAVCLFGTAMGRGTLFPNHVMY 1478

Query: 447  SWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQG 506
            + LVDG     + +A     +E + +G C D   + A+I    ++ ++  A   F+ M+ 
Sbjct: 1479 TCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRW 1538

Query: 507  NGILGDSVIYTSLAYAYWR 525
             G+  +   Y  L + + +
Sbjct: 1539 WGVCPNLATYNILLHGFSK 1557



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 119/473 (25%), Positives = 211/473 (44%), Gaps = 19/473 (4%)

Query: 84   MIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANL 143
            +I+ L    + K A N+L+++    F+ T    N L             L+W    Y   
Sbjct: 990  LINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTL-------------LNW----YCKK 1032

Query: 144  KMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLY 203
               +  +++ D M    +   +    V +++L  +  +   + + KKM +  +  N   Y
Sbjct: 1033 GRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTY 1092

Query: 204  NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER 263
            N LI+   K   +    ++  EM   D+  +  TYN LI  +C  G   EAL + D ME 
Sbjct: 1093 NTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEA 1152

Query: 264  EGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEE 321
             G+  + VTY +L++G C+  +   A+RL   ++       H+ YT LIDG C+   L+E
Sbjct: 1153 AGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDE 1212

Query: 322  ALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
            A++L   M   GV P V+TY+S++   C+ G I+ A  ++  M    +  + +  +TLI 
Sbjct: 1213 AVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIY 1272

Query: 382  AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
             +C+ G+   AMKV   M   G   D FT   L+   C+  ++  A++ L  M   G  P
Sbjct: 1273 NFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVP 1332

Query: 442  SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
            +  +Y  +++GY +  +        D+ +  G       Y +L++  CK   +  A++  
Sbjct: 1333 NSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFL 1392

Query: 502  NLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSF 554
            N +       DSV+Y +L     ++G       + D M +  ++     Y S 
Sbjct: 1393 NRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSL 1445



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 108/420 (25%), Positives = 186/420 (44%), Gaps = 38/420 (9%)

Query: 185  WKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIAL 244
            +  +  M++ G   +   Y  L+   CK  ++ + +K L  + +     D   YNTL+A 
Sbjct: 1354 FSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAE 1413

Query: 245  YCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGAT---P 301
             CK G  +EA+A+ D+M +  + PD  TY+SL+ G CR+G+   A  LF    G     P
Sbjct: 1414 TCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFP 1473

Query: 302  NHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDAN--- 358
            NHV YT L+DG  +A   + A    E M  KG  P  V +N+I+    + G++  AN   
Sbjct: 1474 NHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFF 1533

Query: 359  --------------------------------RLLNEMNEKKIAPDNVTCNTLINAYCKI 386
                                             L + M  + I PD +T ++LI    K 
Sbjct: 1534 STMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKS 1593

Query: 387  GDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSY 446
            G     +K+  +M+  G + DQFT+  LI+ + ++ +M  A +L+  M   G  P   +Y
Sbjct: 1594 GIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTY 1653

Query: 447  SWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQG 506
            + + +G   K+       +L E +  G+    + Y  LI   C+   +  A +L + M+ 
Sbjct: 1654 NHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEA 1713

Query: 507  NGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
             G     V  +++       G+ +    +LD M R RL+ T+  + +    + +D +I +
Sbjct: 1714 LGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAE 1773



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 100/324 (30%), Positives = 155/324 (47%), Gaps = 2/324 (0%)

Query: 153  FDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCK 212
            F  MR   + P+L    +LL+  +K +       +Y  M++ G+  +   ++ LI    K
Sbjct: 1533 FSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSK 1592

Query: 213  SSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVT 272
            S   D   KLL +M  +   AD FT+N LI  Y + G   +A  + + M   G+ PD  T
Sbjct: 1593 SGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDT 1652

Query: 273  YNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMA 330
            YN + +G  ++   RE+  +  ++   G  P H  Y TLI+G CR  D++ A +L++ M 
Sbjct: 1653 YNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEME 1712

Query: 331  AKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTA 390
            A G     V  ++++R L   G+  DA  +L+ M   ++ P   T  TL++ +C+    A
Sbjct: 1713 ALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIA 1772

Query: 391  SAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLV 450
             A+K+K  M   GL LD   Y  LI G C   +   A EL   M      P+  +Y+ LV
Sbjct: 1773 EALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLV 1832

Query: 451  DGYCNKNNEEALLKLLDEFVSRGL 474
            D     NN     KLL +   RGL
Sbjct: 1833 DAISAANNLIQGEKLLTDLQERGL 1856



 Score =  135 bits (339), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 121/540 (22%), Positives = 212/540 (39%), Gaps = 80/540 (14%)

Query: 129  NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
            NS     ++  Y ++    +    FD M      P       LL  L K        K  
Sbjct: 1333 NSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFL 1392

Query: 189  KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
             ++  +    +  +YN L+   CKS ++ +   L  +M   +V  D +TY++L+   C+K
Sbjct: 1393 NRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRK 1452

Query: 249  GMHYEALAVQ------------------------------------DRMEREGISPDIVT 272
            G    A+ +                                     + M ++G  PD V 
Sbjct: 1453 GKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVA 1512

Query: 273  YNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMA 330
            +N++I    R G+M +A   F  ++  G  PN  TY  L+ G+ +   L   L L   M 
Sbjct: 1513 FNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMM 1572

Query: 331  AKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTA 390
             +G++P  +T++S++  L K G      +LL +M  +    D  T N LIN Y + G   
Sbjct: 1573 REGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMR 1632

Query: 391  SAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLV 450
             A  + N M   G+  D+ TY  + +G  K      +  +L  ML+ G  P +  Y  L+
Sbjct: 1633 KAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLI 1692

Query: 451  DGYCNKNNEEALLKLLDEFVSRG-----------------------------------LC 475
            +G C   + +   KL DE  + G                                   L 
Sbjct: 1693 NGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLL 1752

Query: 476  VDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDI 535
              ++ +  L+ RFC+  K+  A +L  +M+  G+  D V Y  L       G+  A  ++
Sbjct: 1753 PTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFEL 1812

Query: 536  LDDMYRRRLMITLKIYRSFSASYAKDNEIL--DLFWSHVVDRGLMS-----KHIFKEMQL 588
             ++M  R L   +  Y     + +  N ++  +   + + +RGL+S     +H+ KE+ +
Sbjct: 1813 YEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQERGLISWGGSTQHLDKELTV 1872


>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Glycine max]
          Length = 852

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 163/609 (26%), Positives = 269/609 (44%), Gaps = 80/609 (13%)

Query: 31  NPNIA-SSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILT 89
            P+++ S+L    + K L+ L      P  +  FFK A  A   ++H+ +S+  + HIL 
Sbjct: 84  GPHLSDSALAPIWVSKALVKLKG---DPKSALKFFKEA-GARAGFRHAAESYCVLAHILF 139

Query: 90  KNKHFKSAQNMLEKIAL--RDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQ 147
               +  A++++++  L  R+F       + L    +       V   L     +L M +
Sbjct: 140 CGMFYLDARSVIKEWILLGREFPGC-DFFDMLWSTRNVCRPGFGVFDTLFNVLVDLGMLE 198

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           +  Q F +M    ++P + +C  LL+ L+K     +    +K MV  G+  ++  YN++I
Sbjct: 199 EARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALSFFKDMVVAGLSPSVFTYNMVI 258

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
               +  D++    L  EM+ K +R D+ TYN+LI  Y K GM   A++V + M+  G  
Sbjct: 259 GCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCE 318

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRA--------- 316
           PD++TYNSLI+ FC+  R+ +A      +K  G  PN VTY+TLID +C+A         
Sbjct: 319 PDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKF 378

Query: 317 --------------------------NDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
                                      DL EA +L   M   GV   +VTY ++L  LC+
Sbjct: 379 FVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCE 438

Query: 351 EGRIRDANRL-----------------------------------LNEMNEKKIAPDNVT 375
           +GR+R+A  L                                   L EMN+K + PD + 
Sbjct: 439 DGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLL 498

Query: 376 CNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGML 435
             T I   C+  +   +M V   M++ GL  + + Y  LI  + K  +   A  LL  M 
Sbjct: 499 YGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQ 558

Query: 436 DAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVD 495
           D G   +  +Y  L+DG C     +  ++  D     GL  ++ +Y ALI   CK + ++
Sbjct: 559 DLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLE 618

Query: 496 YAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFS 555
            A+ LFN M   GI  D ++YTSL     + G P     + + M    + + L  Y S  
Sbjct: 619 EAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAYTSLI 678

Query: 556 ASYAKDNEI 564
             +++  ++
Sbjct: 679 WGFSRYGQV 687



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 105/349 (30%), Positives = 165/349 (47%), Gaps = 5/349 (1%)

Query: 232 RADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARR 291
           R     ++TL  +    GM  EA     +M +  + P + + N L+H   +  +   A  
Sbjct: 178 RPGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALS 237

Query: 292 LFRD--IKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLC 349
            F+D  + G +P+  TY  +I    R  DLE A  L E M AKG+ P +VTYNS++    
Sbjct: 238 FFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYG 297

Query: 350 KEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQF 409
           K G +  A  +  EM +    PD +T N+LIN +CK      A +  + M + GL  +  
Sbjct: 298 KVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVV 357

Query: 410 TYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEF 469
           TY  LI  FCKA  +  A +    M+  G  P+  +Y+ L+D  C   +     KL  E 
Sbjct: 358 TYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEM 417

Query: 470 VSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEP 529
              G+ +++  Y AL+   C+  ++  A+ LF  +   G   +  IYTSL + Y +A   
Sbjct: 418 QQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMM 477

Query: 530 KACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLM 578
           +   DIL++M ++ L   L +Y +      + NEI D   S  V R +M
Sbjct: 478 EKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIED---SMAVIREMM 523



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 141/613 (23%), Positives = 253/613 (41%), Gaps = 122/613 (19%)

Query: 58  SLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKI---ALR-DFLSTP 113
            L+ +FFK  +  V     S+ ++  +I  L +    ++A+++ E++    LR D ++  
Sbjct: 233 GLALSFFK--DMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYN 290

Query: 114 SVLNALVKIH------------DDPDGNSHVLSW--LVIFYANLKMTQDGLQVFDQMRVH 159
           S+++   K+              D      V+++  L+  +   +      +    M+  
Sbjct: 291 SLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQR 350

Query: 160 NLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKV 219
            L P++   + L+++  K  +     K +  M+++G+  N   Y  LI A CK  D+++ 
Sbjct: 351 GLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEA 410

Query: 220 EKLLCEMEFKDVRADLFTYNTLIALYCKKG------------------------------ 249
            KL  EM+   V  ++ TY  L+   C+ G                              
Sbjct: 411 FKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHG 470

Query: 250 -----MHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPN 302
                M  +A+ + + M ++ + PD++ Y + I G CR+  + ++  + R++   G T N
Sbjct: 471 YIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTAN 530

Query: 303 HVTYTTLIDGY-----------------------------------CRANDLEEALRLRE 327
              YTTLID Y                                   C+   +++A+R  +
Sbjct: 531 SYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFD 590

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
            M   G+ P ++ Y +++  LCK   + +A  L NEM +K I+PD +   +LI+   K G
Sbjct: 591 HMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHG 650

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
           +   A+ ++NRM+E G+ LD   Y +LI GF +  ++ +AK LL  ML  G  P      
Sbjct: 651 NPGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPDQVLCI 710

Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGL---CVDVSVYRAL-----IRRFCKKEKVDYAQR 499
            L+  Y    +    L L D+   RGL    +D++V   L     + + C  +      R
Sbjct: 711 CLLRKYYELGDINEALALHDDMARRGLISGTIDITVPSCLTAVTKLHKLCASQSGTDFHR 770

Query: 500 LFNLMQGN-----------GILGDSVIYTSLAYAYWRAGEPKACSD-------ILDDMYR 541
             NL   +             LG + ++T L      A  P  C+        +LDDM  
Sbjct: 771 TANLYLADVEEFSHSGMPFSPLGHARLFTCLEAEALYA--PDMCTSLHAGRRLLLDDMDP 828

Query: 542 RRLMITLKIYRSF 554
           R L   L+I  SF
Sbjct: 829 RGL--ELEICESF 839


>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
 gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
          Length = 581

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 134/417 (32%), Positives = 202/417 (48%), Gaps = 39/417 (9%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           + L++ ++M    + P +   T++++ L +    D   +++ KM++ G  AN   YN LI
Sbjct: 28  EALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEADELFHKMIERGCSANTVAYNALI 87

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           +  CK  ++++  KLL EM  K    D  TYNT+++  C+ G   EA    D M   G S
Sbjct: 88  NGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYS 147

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDIKGA----TPNHVTYTTLIDGYCRANDLEEAL 323
           PD+V YN L+    +EG++ EA  LF+ +  A     P+ +TY TLIDG+CR    +EA+
Sbjct: 148 PDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLITYNTLIDGFCRVEKTDEAM 207

Query: 324 RLREVMAAKGVYPGVVTYNSILRKL----------------------------------- 348
           +L + + AKG  P  VTYNSIL  L                                   
Sbjct: 208 KLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGH 267

Query: 349 CKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ 408
           C+ G +     L  EM EK+ +PD + CN +I+  CK      A KV   M + G + D 
Sbjct: 268 CRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDV 327

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
            TY  L+ G CK   +D A EL   M+D G +P   SYS +++G C  N       L D 
Sbjct: 328 VTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDR 387

Query: 469 FVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWR 525
            + R L  DV  +  L+   CK  K+D A+ L ++M  + +L D V  T+L +   R
Sbjct: 388 MIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCR 444



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 108/333 (32%), Positives = 182/333 (54%), Gaps = 4/333 (1%)

Query: 191 MVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGM 250
           M + G   ++  Y+ +I   CK+  V +  +++ EM  K V  D+ TY  ++   C+ G 
Sbjct: 1   MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60

Query: 251 HYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTT 308
             EA  +  +M   G S + V YN+LI+G C++  +  A +L  ++  KG  P+++TY T
Sbjct: 61  VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120

Query: 309 LIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMN--E 366
           ++ G CR   + EA +  + M ++G  P VV YN +L  L KEG++ +A  L   M+  +
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMAD 180

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
           +K+APD +T NTLI+ +C++  T  AMK+   ++  G M D  TY +++ G  +   MD 
Sbjct: 181 RKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDE 240

Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
           A+E+   M+D+G +P+  +YS ++ G+C   N    L+L +E   +    DV +  A+I 
Sbjct: 241 AEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVID 300

Query: 487 RFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
             CK +KVD A ++   M   G + D V Y  L
Sbjct: 301 MLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNIL 333



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 118/472 (25%), Positives = 222/472 (47%), Gaps = 24/472 (5%)

Query: 80  SHWTMIHILTKNKHFKSAQNMLEKIALR----DFLSTPSVLNALVKIHDDPDGNSHVLSW 135
           ++  +I+ L K+++ + A  +LE++A +    D ++  ++L+ L ++    +      S 
Sbjct: 82  AYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGLCRMGKVSEAKQFFDSM 141

Query: 136 LVIFYANLKMTQDGL--------------QVFDQMRVHN--LMPHLHACTVLLNSLAKDR 179
               Y+   +  +GL               +F  M + +  + P L     L++   +  
Sbjct: 142 PSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLITYNTLIDGFCRVE 201

Query: 180 LTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYN 239
            TD   K++K ++  G + +   YN ++    + S++D+ E++  +M       +  TY+
Sbjct: 202 KTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYS 261

Query: 240 TLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK-- 297
            +++ +C+ G     L + + M  +  SPD++  N++I   C+  ++ +A ++  ++   
Sbjct: 262 IVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKI 321

Query: 298 GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDA 357
           GA P+ VTY  L+DG C+ N +++A  L   M   G  P +V+Y+ +L  LCK  ++ DA
Sbjct: 322 GAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDA 381

Query: 358 NRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHG 417
             L + M E+K+ PD VT N L++  CK G    A  + + M E  ++ D  T   L+HG
Sbjct: 382 RVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHG 441

Query: 418 FCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNN-EEALLKLLDEFVSRG-LC 475
            C+ K  D A  L   M++ G       ++ ++ G C +    +ALL       S G   
Sbjct: 442 LCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFS 501

Query: 476 VDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
            DV  Y  L+    +  +VD A   F  M G+G   D V Y +L     + G
Sbjct: 502 PDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQG 553



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 89/294 (30%), Positives = 150/294 (51%), Gaps = 4/294 (1%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           L+++++M      P +  C  +++ L K +  D   KV ++M ++G V ++  YN+L+  
Sbjct: 277 LELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDG 336

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
            CK++ VDK  +L   M       D+ +Y+ ++   CK    ++A  + DRM    + PD
Sbjct: 337 LCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPD 396

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLRE 327
           +VT+N L+ G C+ G++ EA+ L   +      P+ VT TTL+ G CR    +EA+RL +
Sbjct: 397 VVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQ 456

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM--NEKKIAPDNVTCNTLINAYCK 385
            M  KG    V+ +N +L  LC+EG++  A      M  ++ + +PD VT  TL+NA  +
Sbjct: 457 YMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIE 516

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGF 439
            G    A+    +M  +G   D   Y  L++G  K      A  L   M + GF
Sbjct: 517 AGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGF 570



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 83/249 (33%), Positives = 128/249 (51%), Gaps = 8/249 (3%)

Query: 297 KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRD 356
           KG  P+ VTY+T+I G C+   + EAL + E M  KGV P V TY  I+ +LC+ G++ +
Sbjct: 4   KGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDE 63

Query: 357 ANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIH 416
           A+ L ++M E+  + + V  N LIN  CK  +   A K+   M   G   D  TY  ++ 
Sbjct: 64  ADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILS 123

Query: 417 GFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG-YCNKNNEEA--LLKLLDEFVSRG 473
           G C+  ++  AK+    M   G+SP   +Y+ L+D  Y      EA  L K +D    R 
Sbjct: 124 GLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMD-MADRK 182

Query: 474 LCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACS 533
           +  D+  Y  LI  FC+ EK D A +LF  +   G + D+V Y S+     R    K+  
Sbjct: 183 VAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLAR----KSNM 238

Query: 534 DILDDMYRR 542
           D  ++M+++
Sbjct: 239 DEAEEMFKK 247



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 117/252 (46%), Gaps = 4/252 (1%)

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           MA KG  P VVTY++I+  LCK G++ +A  ++ EM EK + PD  T   +++  C+ G 
Sbjct: 1   MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
              A ++ ++M+E G   +   Y ALI+G CK + ++ A +LL  M   G+ P   +Y+ 
Sbjct: 61  VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ--G 506
           ++ G C         +  D   SRG   DV  Y  L+    K+ KV  A  LF  M    
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMAD 180

Query: 507 NGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI-- 564
             +  D + Y +L   + R  +      +  D+  +  M     Y S     A+ + +  
Sbjct: 181 RKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDE 240

Query: 565 LDLFWSHVVDRG 576
            +  +  +VD G
Sbjct: 241 AEEMFKKMVDSG 252



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 76/268 (28%), Positives = 119/268 (44%), Gaps = 39/268 (14%)

Query: 144 KMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLY 203
           K   D  +V ++M     +P +    +LL+ L K  L D   +++  MV  G   +I  Y
Sbjct: 306 KKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSY 365

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER 263
           +V+++  CK++ V     L   M  + +  D+ T+N L+   CK G   EA  + D M  
Sbjct: 366 SVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSE 425

Query: 264 EGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGA---------------------- 299
             + PD VT  +L+HG CR+ R  EA RLF+ +  KG                       
Sbjct: 426 HNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQ 485

Query: 300 ---------------TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSI 344
                          +P+ VTYTTL++    A  +++A+   + M   G  P  V YN++
Sbjct: 486 ALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTL 545

Query: 345 LRKLCKEGRIRDANRLLNEMNEKKIAPD 372
           +  L K+GR   A+RL   M EK    D
Sbjct: 546 MNGLRKQGRHIQADRLTQAMKEKGFLSD 573


>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 915

 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 130/408 (31%), Positives = 203/408 (49%), Gaps = 2/408 (0%)

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           L+  +   +   + L++F QM   N  P +   TV++ +L +         ++K+M +  
Sbjct: 280 LIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKH 339

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
              N+H Y VLI + C+ S+ D  +K+L  M  K +   + TYN LI  YCKKG+   AL
Sbjct: 340 CQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASAL 399

Query: 256 AVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGY 313
            +   ME    SP+  TYN LI GFCR   + +A  L   +  +   PN VTY  LI G 
Sbjct: 400 EILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQ 459

Query: 314 CRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDN 373
           C+  DL  A +L  +M   G+ P   TY+  +  LCK G + +A  L   + EK I  + 
Sbjct: 460 CKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANE 519

Query: 374 VTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFG 433
           V  +TLI+ YCK+G  +    + ++ML AG + +  TY +LI G+CK K    A+ L+  
Sbjct: 520 VIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDI 579

Query: 434 MLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEK 493
           M+     P+  +Y+ L+D     +  +    + D+ +S G   DV +Y A I  +C   +
Sbjct: 580 MIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGR 639

Query: 494 VDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
           +  A+ L   M   GI+ D+++YT    AY R G       IL  M+ 
Sbjct: 640 LKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHE 687



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 164/549 (29%), Positives = 258/549 (46%), Gaps = 42/549 (7%)

Query: 19  AIMLKGHWAKLLNPNIASSLTSTAIHKV----LLNLYNCCHIPSLSCAFFKWAESAVPNY 74
           +I+ + +W K  +P++ + + S A   +     LNL      P  + AFF W       +
Sbjct: 55  SILSRPNWQK--HPSLKNLIPSIAPSHISALFALNL-----DPQTALAFFNWIGQK-HGF 106

Query: 75  KHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLS 134
           KH++QSH +M++IL  N + + A+NM  +I +    ST S  NAL            VL 
Sbjct: 107 KHNVQSHVSMLNILVPNGYLRIAENM--RILM--IKSTDSSENALF-----------VLE 151

Query: 135 WLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQL 194
            L     ++    D  +    +R +N+         LL  L++  + D +  VY +M+  
Sbjct: 152 ML----RSMNRRVDAFKFKLTLRCYNM---------LLMLLSRFLMIDEMKSVYLEMLDD 198

Query: 195 GVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEA 254
            V  NI   N +++  CK  +V + E  + ++    +  D FTY +LI  YC+      A
Sbjct: 199 MVTPNIFTLNTMVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAA 258

Query: 255 LAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDG 312
            A+   M  +G   + V+Y +LIHGFC   R+ EA +LF  +      P   TYT +I  
Sbjct: 259 NAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFA 318

Query: 313 YCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPD 372
            C+     EAL + + M  K   P V TY  ++  LC++    DA ++LN M EK + P 
Sbjct: 319 LCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPS 378

Query: 373 NVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLF 432
            VT N LI+ YCK G +ASA+++ + M       +  TY  LI GFC+ K +  A  LL 
Sbjct: 379 VVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLH 438

Query: 433 GMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKE 492
            ML+    P+  +Y+ L+ G C + +  +  KLL      GL  D   Y   I   CK+ 
Sbjct: 439 KMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRG 498

Query: 493 KVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYR 552
            V+ A+ LF  ++  GI  + VIY++L   Y + G+      +LD M     +     Y 
Sbjct: 499 LVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYN 558

Query: 553 SFSASYAKD 561
           S    Y K+
Sbjct: 559 SLIDGYCKE 567



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 118/402 (29%), Positives = 193/402 (48%), Gaps = 2/402 (0%)

Query: 169 TVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEF 228
           T L++   + R  D   K++ +M +      +  Y V+I A C+     +   +  EM  
Sbjct: 278 TNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTE 337

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
           K  + ++ TY  LI   C+     +A  + + M  +G+ P +VTYN+LI G+C++G    
Sbjct: 338 KHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSAS 397

Query: 289 ARRLFR--DIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILR 346
           A  +    +    +PN  TY  LI G+CR  ++ +A+ L   M  + + P VVTYN ++ 
Sbjct: 398 ALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIH 457

Query: 347 KLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLML 406
             CKEG +  A +LL+ MNE  + PD  T +  I+  CK G    A  +   + E G+  
Sbjct: 458 GQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKA 517

Query: 407 DQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLL 466
           ++  Y  LI G+CK  ++   + LL  ML AG  P+  +Y+ L+DGYC + N +    L+
Sbjct: 518 NEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLV 577

Query: 467 DEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRA 526
           D  + R +      Y  LI    K ++ D A  +F+ M   G   D  IYT+  +AY   
Sbjct: 578 DIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSH 637

Query: 527 GEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLF 568
           G  K    ++  M  + +M    +Y  F  +Y +   I   F
Sbjct: 638 GRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAF 679



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 134/489 (27%), Positives = 225/489 (46%), Gaps = 29/489 (5%)

Query: 92  KHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLV------------IF 139
           KH  S +N++  IA       PS ++AL  ++ DP       +W+             + 
Sbjct: 64  KH-PSLKNLIPSIA-------PSHISALFALNLDPQTALAFFNWIGQKHGFKHNVQSHVS 115

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
             N+ +    L++ + MR+  +     +   L        + +M+  + +++        
Sbjct: 116 MLNILVPNGYLRIAENMRILMIKSTDSSENALF-------VLEMLRSMNRRVDAFKFKLT 168

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
           +  YN+L+    +   +D+++ +  EM    V  ++FT NT++  YCK G   EA     
Sbjct: 169 LRCYNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEAELYVS 228

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRAN 317
           ++ + G+S D  TY SLI G+CR   +  A  +F  +  KG   N V+YT LI G+C A 
Sbjct: 229 KIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEAR 288

Query: 318 DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCN 377
            ++EAL+L   M     +P V TY  I+  LC+ GR  +A  +  EM EK   P+  T  
Sbjct: 289 RVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYT 348

Query: 378 TLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA 437
            LI + C+  +   A K+ N MLE GL+    TY ALI G+CK      A E+L  M   
Sbjct: 349 VLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESN 408

Query: 438 GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYA 497
             SP+  +Y+ L+ G+C   N    + LL + + R L  +V  Y  LI   CK+  +  A
Sbjct: 409 NCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSA 468

Query: 498 QRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSAS 557
            +L +LM  +G++ D   Y+       + G  +    + + +  + +     IY +    
Sbjct: 469 YKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDG 528

Query: 558 YAKDNEILD 566
           Y K  ++ D
Sbjct: 529 YCKVGKVSD 537



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 122/507 (24%), Positives = 216/507 (42%), Gaps = 60/507 (11%)

Query: 50  LYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDF 109
           ++  C +   + A   + E    + + ++ ++  +I  L ++ +F  A+ +L  +  +  
Sbjct: 316 IFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGL 375

Query: 110 LSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACT 169
           + +    NAL+      DG           Y    ++   L++   M  +N  P+     
Sbjct: 376 IPSVVTYNALI------DG-----------YCKKGLSASALEILSLMESNNCSPNARTYN 418

Query: 170 VLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFK 229
            L+    + +       +  KM++  +  N+  YN+LIH  CK  D+    KLL  M   
Sbjct: 419 ELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNES 478

Query: 230 DVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA 289
            +  D +TY+  I   CK+G+  EA ++ + ++ +GI  + V Y++LI G+C+ G++ + 
Sbjct: 479 GLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDG 538

Query: 290 RRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAK--------------- 332
           R L   +   G  PN +TY +LIDGYC+  + +EA  L ++M  +               
Sbjct: 539 RFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDN 598

Query: 333 --------------------GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPD 372
                               G +P V  Y + +   C  GR++DA  L+ +MN K I PD
Sbjct: 599 LLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPD 658

Query: 373 NVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLF 432
            +     I+AY + G    A  +  RM E G     +TY  LI     AK  +++     
Sbjct: 659 TMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSEL 718

Query: 433 GMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKE 492
             L +G + +  S  W       + + E  L L  +    G   + + Y   I   CK  
Sbjct: 719 SDLSSGVASNDFSNCW------RRVDYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVG 772

Query: 493 KVDYAQRLFNLMQGNGILGDSVIYTSL 519
            ++ A RLF+ M+  G   +  IY SL
Sbjct: 773 CLEVAHRLFDHMKEKGQSPNEDIYNSL 799



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 77/364 (21%), Positives = 143/364 (39%), Gaps = 28/364 (7%)

Query: 83  TMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVK--IHDDPDGNSH--------- 131
           ++I    K K+FK A+ +++ +  RD          L+   + DD    +H         
Sbjct: 559 SLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLST 618

Query: 132 -------VLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMV 184
                  + +  +  Y +    +D   +  +M    +MP     T+ +++  +    D  
Sbjct: 619 GSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGA 678

Query: 185 WKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIAL 244
           + + K+M ++G   + + Y+ LI     +   +             V ++ F+       
Sbjct: 679 FGILKRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVASNDFSN------ 732

Query: 245 YCKKGMHYE-ALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATP 301
            C + + YE  L +  +M   G +P+  TY   I G C+ G +  A RLF  +K  G +P
Sbjct: 733 -CWRRVDYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSP 791

Query: 302 NHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLL 361
           N   Y +L+   C+     EA+R  ++M      P + +   +L  L  EG    A R+ 
Sbjct: 792 NEDIYNSLLGCSCQLGLYGEAIRWLDIMIENRHLPHLDSCKLLLCGLYDEGNDEKAKRVF 851

Query: 362 NEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKA 421
               + +   D +    LI+   K G +     +   M   G  +   TY  LI GF   
Sbjct: 852 CSFLQCEYNYDEMVWKVLIDGLLKKGLSDKCSDLFGIMETQGCQIHPKTYSMLIEGFDGI 911

Query: 422 KEMD 425
           +E+D
Sbjct: 912 QEID 915


>gi|38567720|emb|CAE76009.1| B1358B12.18 [Oryza sativa Japonica Group]
 gi|90265197|emb|CAH67636.1| B0812A04.6 [Oryza sativa Indica Group]
          Length = 609

 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 120/375 (32%), Positives = 197/375 (52%), Gaps = 5/375 (1%)

Query: 188 YKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCK 247
           Y +++  G+     L+NVL+    +  ++   + +  EM+ + VR  + ++NT+I+  C+
Sbjct: 228 YLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCR 287

Query: 248 KGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVT 305
            G    A  +  RM   G++PD+ TY +LI G CR GR+ +AR +F  +  +G  PN V 
Sbjct: 288 AGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVV 347

Query: 306 YTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMN 365
           +T LID +C+  D E  L L   M  +GV P  VTYN+I+  LC+   ++ A+ ++ EM 
Sbjct: 348 FTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMR 407

Query: 366 EKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMD 425
              + PD VT  TLI+ YCK  +   AM++K  M+  G+ LD+ TY ALI G  KA    
Sbjct: 408 SAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSA 467

Query: 426 IAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
            A+ +L  M++AG  P   +Y+ ++D +C K + +  L+LL E  ++G    V  Y  ++
Sbjct: 468 DAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIM 527

Query: 486 RRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
             FCK  ++  A  L N M   G+  D + Y  L   + + G+    +DI +    +  +
Sbjct: 528 NGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCKHGK---VTDIEELKSAKGTV 584

Query: 546 ITLKIYRSFSASYAK 560
             L +Y S      K
Sbjct: 585 PDLGVYTSIVGEIVK 599



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 107/380 (28%), Positives = 172/380 (45%), Gaps = 44/380 (11%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           LQ+ D      L P      VL+  L +         V+ +M   GV   +  +N +I  
Sbjct: 229 LQLLDA----GLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISG 284

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
            C++ D+D  E L   M    V  D++TY  LI   C+ G   +A  V ++M   G+ P+
Sbjct: 285 MCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPN 344

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLRE 327
            V +  LI   C++G       L R+++  G  P+ VTY  +++G CRA DL+ A  +  
Sbjct: 345 AVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVV 404

Query: 328 VMAAKGVYPGVVTYNSILRKLCKE-----------------------------------G 352
            M + G+ P  VTY +++   CKE                                   G
Sbjct: 405 EMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAG 464

Query: 353 RIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYK 412
           R  DA R+L EM E  + PDN T   +I+A+C+ GD  + +++   M   G      TY 
Sbjct: 465 RSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYN 524

Query: 413 ALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSR 472
            +++GFCK  +M  A  LL  M++ G SP   +Y+ L+DG+C       + +L     ++
Sbjct: 525 VIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCKHGKVTDIEELKS---AK 581

Query: 473 GLCVDVSVYRALIRRFCKKE 492
           G   D+ VY +++    KK+
Sbjct: 582 GTVPDLGVYTSIVGEIVKKK 601



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 93/318 (29%), Positives = 160/318 (50%), Gaps = 18/318 (5%)

Query: 240 TLIALYCKKGMHYEALAVQDRMER----------------EGISPDIVTYNSLIHGFCRE 283
           TL+ L  ++G+  E  +    M R                 G+ P+   +N L+    R 
Sbjct: 194 TLVLLALRRGIRLEPTSCTGLMSRFPTAPEACAFYLQLLDAGLPPEAKLFNVLMRDLVRL 253

Query: 284 GRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTY 341
           G +  A+ +F ++  +G     V++ T+I G CRA DL+ A  L   M+  GV P V TY
Sbjct: 254 GELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTY 313

Query: 342 NSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLE 401
            ++++ LC+ GRI DA  +  +M  + + P+ V    LI+A+CK GD  + +++   M E
Sbjct: 314 GALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRE 373

Query: 402 AGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEA 461
            G+  D  TY A+++G C+A+++  A  ++  M  AG  P   +Y+ L+DGYC +   + 
Sbjct: 374 RGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDM 433

Query: 462 LLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAY 521
            +++    V+ G+ +D   Y ALI    K  +   A+R+   M   G+  D+  YT +  
Sbjct: 434 AMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVID 493

Query: 522 AYWRAGEPKACSDILDDM 539
           A+ R G+ K    +L +M
Sbjct: 494 AFCRKGDVKTGLRLLKEM 511



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 111/234 (47%)

Query: 333 GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
           G+ P    +N ++R L + G +  A  + +EM  + +    V+ NT+I+  C+ GD   A
Sbjct: 235 GLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGA 294

Query: 393 MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
             +  RM EAG+  D +TY ALI G C+   ++ A+ +   M   G  P+   ++ L+D 
Sbjct: 295 ETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDA 354

Query: 453 YCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGD 512
           +C K + E +L+L  E   RG+  D   Y A++   C+   +  A  +   M+  G+  D
Sbjct: 355 HCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPD 414

Query: 513 SVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
           +V YT+L   Y +  E     +I  +M    + +    Y +  +  +K     D
Sbjct: 415 TVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSAD 468



 Score = 43.1 bits (100), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 34/143 (23%), Positives = 55/143 (38%), Gaps = 3/143 (2%)

Query: 400 LEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNE 459
           L  G+ L+  +   L+  F  A E   A      +LDAG  P    ++ L+         
Sbjct: 200 LRRGIRLEPTSCTGLMSRFPTAPE---ACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGEL 256

Query: 460 EALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
            +   + DE  SRG+   V  +  +I   C+   +D A+ L   M   G+  D   Y +L
Sbjct: 257 ASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGAL 316

Query: 520 AYAYWRAGEPKACSDILDDMYRR 542
                R G  +    + + M  R
Sbjct: 317 IQGLCRVGRIEDARGVFEKMCGR 339


>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
           [Vitis vinifera]
 gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
          Length = 890

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 126/382 (32%), Positives = 191/382 (50%), Gaps = 2/382 (0%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           + L++F  M   N  P +   TVL+ +L+          ++ +M + G   N+H Y VLI
Sbjct: 282 EALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLI 341

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
              CK + +D+  K+L EM  K +   + TYN LI  YCK+GM  +A  + D ME     
Sbjct: 342 DGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCG 401

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
           P+  TYN LI G C++ ++ +A  L   +  +  +P+ +TY +LI G C+ NDLE A RL
Sbjct: 402 PNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRL 461

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
             +M   G+ P   TY+  +  LCKEGR+ +A  L + +  K +  + V    LI+ YCK
Sbjct: 462 LSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCK 521

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
           +G    A  +  RML    + + +TY  LI G CK K+M  A  L+  ML  G  P+  +
Sbjct: 522 VGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVT 581

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+ L+         +  LK+ +  VS G   DV  Y A +  +  +  ++    +   M 
Sbjct: 582 YTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMN 641

Query: 506 GNGILGDSVIYTSLAYAYWRAG 527
             GIL D V YT L   Y R G
Sbjct: 642 EEGILPDLVTYTVLIDGYARLG 663



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 177/602 (29%), Positives = 274/602 (45%), Gaps = 82/602 (13%)

Query: 19  AIMLKGHWAKLLNPNIASSLTS-TAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHS 77
           +I+ + +W K  +P++   L S T  H   L  +N    P  + +FF W  +  P +KH+
Sbjct: 46  SILSRPNWQK--HPSLRKLLPSLTPSHVSSLFAFNL--DPQTALSFFNWI-ALRPGFKHN 100

Query: 78  LQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLV 137
           + S+ +M++IL + +    A    EKI +       S++ +   I D       VL  L 
Sbjct: 101 VHSYSSMLNILIRARLLGVA----EKIRI-------SMIKSCCSIED-------VLFVLE 142

Query: 138 IFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVV 197
           +F    KM  DG   F         P L     +L SL+K  L D +  VY +++   + 
Sbjct: 143 VFR---KMNADGEFKFK--------PTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQIS 191

Query: 198 ANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCK-KGMH--YEA 254
            NI+ +N +++  CK  +V + E    ++    +  D FTY +LI  +C+ KG+   YE 
Sbjct: 192 PNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEV 251

Query: 255 LAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI------------------ 296
             +   M ++G   + V+Y +LIHG C  GR+ EA +LF D+                  
Sbjct: 252 FLI---MPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYA 308

Query: 297 -------------------KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPG 337
                              KG  PN  TYT LIDG C+ N ++EA ++   M+ KG+ P 
Sbjct: 309 LSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPS 368

Query: 338 VVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKN 397
           VVTYN+++   CKEG I DA  +L+ M      P+  T N LI   CK      AM + N
Sbjct: 369 VVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLN 428

Query: 398 RMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKN 457
           +MLE  L     TY +LIHG CK  +++ A  LL  M + G  P   +YS  +D  C + 
Sbjct: 429 KMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEG 488

Query: 458 NEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYT 517
             E    L D   ++G+  +  +Y ALI  +CK  K+D A  L   M  +  L +S  Y 
Sbjct: 489 RVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYN 548

Query: 518 SLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKD---NEILDLFWSHVVD 574
            L     +  + K  S ++  M    +  T+  Y        KD   +  L +F +H+V 
Sbjct: 549 VLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVF-NHMVS 607

Query: 575 RG 576
            G
Sbjct: 608 LG 609



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 142/495 (28%), Positives = 215/495 (43%), Gaps = 90/495 (18%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           + L +F++M+     P++H  TVL++ L K+   D   K+  +M + G++ ++  YN LI
Sbjct: 317 EALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALI 376

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
              CK   +D   ++L  ME      +  TYN LI   CKK   ++A+A+ ++M    +S
Sbjct: 377 DGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLS 436

Query: 268 PDIVTYNSLIHG-----------------------------------FCREGRMREARRL 292
           P ++TYNSLIHG                                    C+EGR+ EA  L
Sbjct: 437 PSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTL 496

Query: 293 FRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
           F  +K  G   N V YT LIDGYC+   ++ A  L E M      P   TYN ++  LCK
Sbjct: 497 FDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCK 556

Query: 351 EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML---------- 400
           E ++++A+ L+ +M    + P  VT   LI    K G    A+KV N M+          
Sbjct: 557 EKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCT 616

Query: 401 -------------------------EAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGML 435
                                    E G++ D  TY  LI G+ +      A + L  M+
Sbjct: 617 YTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMV 676

Query: 436 DAGFSPSYCSYSWLV------------------DGYCNKNNEEALLKLLDEFVSRGLCVD 477
           D G  PS    S L+                  D   N    E  LKL ++ V  G  +D
Sbjct: 677 DTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTID 736

Query: 478 VSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILD 537
           VS+Y ALI  FC++E+++ AQ L + M+  G+     IY SL     + G       ++D
Sbjct: 737 VSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVD 796

Query: 538 DMYRRRLMITLKIYR 552
            M    L+  L+ Y+
Sbjct: 797 AMVENGLLPLLESYK 811



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 132/556 (23%), Positives = 226/556 (40%), Gaps = 107/556 (19%)

Query: 77  SLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWL 136
           ++ ++  +I  L K      A+ ML +++ +  + +    NAL+      DG        
Sbjct: 333 NVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALI------DG-------- 378

Query: 137 VIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGV 196
              Y    M  D  ++ D M  ++  P+      L+  L K R       +  KM++  +
Sbjct: 379 ---YCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKL 435

Query: 197 VANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALA 256
             ++  YN LIH  CK +D++   +LL  M    +  D +TY+  I   CK+G   EA  
Sbjct: 436 SPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGT 495

Query: 257 VQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYC 314
           + D ++ +G+  + V Y +LI G+C+ G++  A  L   +      PN  TY  LI+G C
Sbjct: 496 LFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLC 555

Query: 315 RANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLN------------ 362
           +   ++EA  L   M   GV P VVTY  ++ ++ K+G    A ++ N            
Sbjct: 556 KEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVC 615

Query: 363 -----------------------EMNEKKIAPDNVTCNTLINAYCKIG------------ 387
                                  +MNE+ I PD VT   LI+ Y ++G            
Sbjct: 616 TYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCM 675

Query: 388 ----------------------------------DTAS-------AMKVKNRMLEAGLML 406
                                             D+ S       A+K+  +M+E G  +
Sbjct: 676 VDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTI 735

Query: 407 DQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLL 466
           D   Y ALI GFC+ + ++ A+ L+  M + G SPS   Y+ L+D  C        ++L+
Sbjct: 736 DVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLV 795

Query: 467 DEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRA 526
           D  V  GL   +  Y+ L+     +   + A+ +F+ +   G   D V +  L     + 
Sbjct: 796 DAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKR 855

Query: 527 GEPKACSDILDDMYRR 542
                CS+++D M  +
Sbjct: 856 DLVDECSELIDIMEEK 871



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 95/396 (23%), Positives = 170/396 (42%), Gaps = 55/396 (13%)

Query: 146 TQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNV 205
            ++   +FD ++   +  +    T L++   K    D+ + + ++M+    + N + YNV
Sbjct: 490 VEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNV 549

Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
           LI   CK   + +   L+ +M    V+  + TY  LI    K G    AL V + M   G
Sbjct: 550 LIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLG 609

Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCR-------- 315
             PD+ TY + +H +  +G + E   +   +  +G  P+ VTYT LIDGY R        
Sbjct: 610 YQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAF 669

Query: 316 -------------------------------------------ANDLEE--ALRLREVMA 330
                                                      +N LE   AL+L E M 
Sbjct: 670 DFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMV 729

Query: 331 AKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTA 390
             G    V  Y +++   C++ R+ +A  L++ M E+ ++P     N+L++  CK+G  A
Sbjct: 730 EHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYA 789

Query: 391 SAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLV 450
            A+++ + M+E GL+    +YK L+ G       + AK +  G+L  G++    ++  L+
Sbjct: 790 EAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLI 849

Query: 451 DGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
           DG   ++  +   +L+D    +G   +   Y  LI 
Sbjct: 850 DGLLKRDLVDECSELIDIMEEKGCQPNPLTYSLLIE 885



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 93/344 (27%), Positives = 149/344 (43%), Gaps = 20/344 (5%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           NS+  + L+      K  ++   +  +M    + P +   T+L+  + KD   D   KV+
Sbjct: 543 NSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVF 602

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
             MV LG   ++  Y   +HA      +++V+ ++ +M  + +  DL TY  LI  Y + 
Sbjct: 603 NHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARL 662

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREAR------------------ 290
           G+ + A      M   G  P +   + LI     E RM+E R                  
Sbjct: 663 GLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIAL 722

Query: 291 RLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
           +LF  +   G T +   Y  LI G+C+   LEEA  L   M  +G+ P    YNS+L   
Sbjct: 723 KLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCC 782

Query: 349 CKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ 408
           CK G   +A RL++ M E  + P   +   L+      G    A  V + +L  G   D+
Sbjct: 783 CKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDE 842

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
             +K LI G  K   +D   EL+  M + G  P+  +YS L++G
Sbjct: 843 VAWKVLIDGLLKRDLVDECSELIDIMEEKGCQPNPLTYSLLIEG 886



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/279 (22%), Positives = 131/279 (46%), Gaps = 36/279 (12%)

Query: 93  HFKSAQNMLEKIALRDFLSTPSVLNALVKIHDD---PDGNSHVLSWLVIFYANLKMTQDG 149
           H   +Q MLE++            + + K++++   PD  ++ +  L+  YA L +T   
Sbjct: 622 HAYFSQGMLEEVD-----------DVIAKMNEEGILPDLVTYTV--LIDGYARLGLTHRA 668

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLA-KDRLTD-----------------MVWKVYKKM 191
                 M      P L+  ++L+ +L+ ++R+ +                 +  K+++KM
Sbjct: 669 FDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKM 728

Query: 192 VQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMH 251
           V+ G   ++ +Y  LI   C+   +++ + L+  M+ + +      YN+L+   CK G++
Sbjct: 729 VEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVY 788

Query: 252 YEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGATPNH--VTYTTL 309
            EA+ + D M   G+ P + +Y  L+ G   EG   +A+ +F  +     N+  V +  L
Sbjct: 789 AEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVL 848

Query: 310 IDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
           IDG  + + ++E   L ++M  KG  P  +TY+ ++  L
Sbjct: 849 IDGLLKRDLVDECSELIDIMEEKGCQPNPLTYSLLIEGL 887


>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Brachypodium distachyon]
          Length = 897

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 146/552 (26%), Positives = 251/552 (45%), Gaps = 16/552 (2%)

Query: 24  GHWA-KLLNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHW 82
           G W   +   +I S L+  A+  ++    +  H P L   FF W+   +     S  +  
Sbjct: 63  GDWKLAIAASDIPSRLSPDAVSCLICRRSHSLH-PKLLLDFFYWSRPRIA--PPSADAFA 119

Query: 83  TMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGN---------SHVL 133
            +   L    HF  A  +L ++ L      P VL ++ +   D D           + VL
Sbjct: 120 RLAASLCAASHFPQANGLLHQMILA-HPHPPLVLASIQRAIQDSDARSPSPSPSHSTAVL 178

Query: 134 SWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQ 193
             LV  Y      +   QV   M    L P    C  LL  L +    ++VWK+   M  
Sbjct: 179 DVLVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKGFMEG 238

Query: 194 LGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYE 253
            G+  +++ Y+  + A CK+ D D  +K+  EM  +D   +  TYN +I+  C+ G   E
Sbjct: 239 AGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEE 298

Query: 254 ALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLID 311
           A   ++ M   G+SPD  TY +L++G C+ GR++EA+ L  ++   G  PN V Y TL+D
Sbjct: 299 AFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVD 358

Query: 312 GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAP 371
           G+ +     EA  +   M + GV P  + Y++++R LCK G++  A++LLNEM +    P
Sbjct: 359 GFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRP 418

Query: 372 DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
           D  T + L+  + +  D   A ++ N M  +G++ + +TY  +I+G C+  E   A  LL
Sbjct: 419 DTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLL 478

Query: 432 FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
             M+  G  P+   Y+ L+ G+  + +     + L+      +  D+  Y +LI+     
Sbjct: 479 EEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTV 538

Query: 492 EKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIY 551
            +++ A+  +  +Q  G++ D   Y+ L + Y +    +    +L  M    L      Y
Sbjct: 539 GRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTY 598

Query: 552 RSFSASYAKDNE 563
                 Y K N+
Sbjct: 599 TDLLEGYFKSND 610



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 111/451 (24%), Positives = 209/451 (46%), Gaps = 37/451 (8%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           +VF++MR  +   +     V+++ L +    +  +   ++MV  G+  +   Y  L++  
Sbjct: 266 KVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGL 325

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           CK   + + + LL EM    ++ ++  Y TL+  + K+G   EA  + + M   G+ P+ 
Sbjct: 326 CKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPNK 385

Query: 271 VTYNSLIHGFCREGRMREARRLFRDI---------------------------------- 296
           + Y++LI G C+ G++  A +L  ++                                  
Sbjct: 386 IMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNE 445

Query: 297 ---KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGR 353
               G  PN  TY  +I+G C+  + +EA  L E M ++G+ P    Y  ++    KEG 
Sbjct: 446 MRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGH 505

Query: 354 IRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKA 413
           I  A   L  M +  + PD    N+LI     +G    A +   ++ + GL+ D+FTY  
Sbjct: 506 ISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSG 565

Query: 414 LIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
           LIHG+CK + ++ A +LL  ML++G  P+  +Y+ L++GY   N+ E +  +L   +  G
Sbjct: 566 LIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSG 625

Query: 474 LCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACS 533
              D  +Y  +IR   + E ++ A  +   ++ NG++ D  IY+SL     +  + +   
Sbjct: 626 DKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAV 685

Query: 534 DILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
            +LD+M +  L   +  Y +    + +  +I
Sbjct: 686 GLLDEMAKEGLEPGIVCYNALIDGFCRSGDI 716



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 117/433 (27%), Positives = 201/433 (46%), Gaps = 10/433 (2%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           + D+M    L P++     L++   K+      + +  +M+  GV  N  +Y+ LI   C
Sbjct: 337 LLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLC 396

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYE---ALAVQDRMEREGISP 268
           K   + +  KLL EM     R D FTY+ L+  + +   HY+   A  + + M   GI P
Sbjct: 397 KIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQ---HYDKDGAFELLNEMRNSGILP 453

Query: 269 DIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLR 326
           +  TY  +I+G C+ G  +EA  L  ++  +G  PN   Y  LI G+ +   +  A    
Sbjct: 454 NAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESL 513

Query: 327 EVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKI 386
           E M    V P +  YNS+++ L   GRI +A     ++ ++ + PD  T + LI+ YCK 
Sbjct: 514 ENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKT 573

Query: 387 GDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSY 446
            +   A ++  +ML +GL  +  TY  L+ G+ K+ + +    +L  ML +G  P    Y
Sbjct: 574 RNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIY 633

Query: 447 SWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQG 506
             ++       N E    +L E    GL  D+ +Y +LI   CK   ++ A  L + M  
Sbjct: 634 GIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAK 693

Query: 507 NGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
            G+    V Y +L   + R+G+     ++ D +  + L+     Y +      K+ +I D
Sbjct: 694 EGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITD 753

Query: 567 LF--WSHVVDRGL 577
            F  +  ++DRG+
Sbjct: 754 AFDLYKDMLDRGI 766



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 120/453 (26%), Positives = 218/453 (48%), Gaps = 44/453 (9%)

Query: 115 VLNALVKIHDDPDGNSHVLSWLVIFYANLK-MTQDG-LQVFDQMRVHNLMPHLHACTVLL 172
           +LN ++K+   PD      ++  +   + +   +DG  ++ ++MR   ++P+ +   +++
Sbjct: 407 LLNEMIKVGHRPD----TFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMI 462

Query: 173 NSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVR 232
           N L ++  +     + ++M+  G+  N  +Y  LI    K   +    + L  M   +V 
Sbjct: 463 NGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVL 522

Query: 233 ADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRL 292
            DLF YN+LI      G   EA     ++++ G+ PD  TY+ LIHG+C+   + +A +L
Sbjct: 523 PDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQL 582

Query: 293 FRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYP-----GVVT----- 340
            + +   G  PN  TYT L++GY ++ND E+   + + M   G  P     G+V      
Sbjct: 583 LQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSR 642

Query: 341 -------------------------YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVT 375
                                    Y+S++  LCK   +  A  LL+EM ++ + P  V 
Sbjct: 643 SENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVC 702

Query: 376 CNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGML 435
            N LI+ +C+ GD + A  V + +L  GL+ +  TY ALI G CK  ++  A +L   ML
Sbjct: 703 YNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDML 762

Query: 436 DAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVD 495
           D G +P    Y+ L  G  +  + E  L L +E  +RG    VS++  L+R FCK+ ++ 
Sbjct: 763 DRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGY-AHVSLFSTLVRGFCKRGRLQ 821

Query: 496 YAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
             ++L ++M    I+ ++    ++   + +AG+
Sbjct: 822 ETEKLLHVMMDREIVPNAQTVENVITEFGKAGK 854



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 101/363 (27%), Positives = 168/363 (46%), Gaps = 2/363 (0%)

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
           D  +++  +M   G++ N + Y ++I+  C++ +  +   LL EM  + ++ + F Y  L
Sbjct: 437 DGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPL 496

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGA 299
           I  + K+G    A    + M +  + PD+  YNSLI G    GR+ EA   +  +  +G 
Sbjct: 497 IIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGL 556

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
            P+  TY+ LI GYC+  +LE+A +L + M   G+ P   TY  +L    K       + 
Sbjct: 557 VPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSS 616

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
           +L  M      PDN     +I    +  +   A  V   + + GL+ D   Y +LI G C
Sbjct: 617 ILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLC 676

Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
           K  +M+ A  LL  M   G  P    Y+ L+DG+C   +      + D  +++GL  +  
Sbjct: 677 KMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCV 736

Query: 480 VYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
            Y ALI   CK   +  A  L+  M   GI  D+ +Y  LA     A + +    + ++M
Sbjct: 737 TYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEM 796

Query: 540 YRR 542
           + R
Sbjct: 797 FNR 799



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 89/322 (27%), Positives = 159/322 (49%), Gaps = 4/322 (1%)

Query: 261 MEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRAND 318
           ME  GI PD+ TY++ +   C+      A+++F +++      N VTY  +I G CR+  
Sbjct: 236 MEGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGA 295

Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT 378
           +EEA   +E M   G+ P   TY +++  LCK GR+++A  LL+EM+   + P+ V   T
Sbjct: 296 VEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYAT 355

Query: 379 LINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAG 438
           L++ + K G  A A  + N M+ AG+  ++  Y  LI G CK  ++  A +LL  M+  G
Sbjct: 356 LVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVG 415

Query: 439 FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQ 498
             P   +Y  L+ G+    +++   +LL+E  + G+  +   Y  +I   C+  +   A 
Sbjct: 416 HRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAG 475

Query: 499 RLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASY 558
            L   M   G+  ++ +Y  L   + + G      + L++M +  ++  L  Y S     
Sbjct: 476 NLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGL 535

Query: 559 AKDNEI--LDLFWSHVVDRGLM 578
           +    I   + +++ V  RGL+
Sbjct: 536 STVGRIEEAEEYYAQVQKRGLV 557



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 111/428 (25%), Positives = 199/428 (46%), Gaps = 20/428 (4%)

Query: 80  SHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIF 139
           ++  MI+ L +N   K A N+LE++                 I +    N+ + + L+I 
Sbjct: 457 TYGIMINGLCQNGESKEAGNLLEEM-----------------ISEGLKPNAFMYAPLIIG 499

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
           ++         +  + M   N++P L     L+  L+     +   + Y ++ + G+V +
Sbjct: 500 HSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPD 559

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
              Y+ LIH  CK+ +++K ++LL +M    ++ +  TY  L+  Y K   H +  ++  
Sbjct: 560 EFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQ 619

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRAN 317
            M   G  PD   Y  +I    R   M  A  +  +++  G  P+   Y++LI G C+  
Sbjct: 620 SMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMA 679

Query: 318 DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCN 377
           D+E+A+ L + MA +G+ PG+V YN+++   C+ G I  A  + + +  K + P+ VT  
Sbjct: 680 DMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYT 739

Query: 378 TLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA 437
            LI+  CK GD   A  +   ML+ G+  D F Y  L  G   A +++ A  L   M + 
Sbjct: 740 ALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNR 799

Query: 438 GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYA 497
           G++     +S LV G+C +   +   KLL   + R +  +      +I  F K  K+  A
Sbjct: 800 GYA-HVSLFSTLVRGFCKRGRLQETEKLLHVMMDREIVPNAQTVENVITEFGKAGKLCEA 858

Query: 498 QRLFNLMQ 505
            R+F  +Q
Sbjct: 859 HRVFAELQ 866



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 64/256 (25%), Positives = 122/256 (47%), Gaps = 3/256 (1%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           S+L +++   D PD  +H+   ++   +  +  +    V  ++  + L+P LH  + L++
Sbjct: 616 SILQSMLGSGDKPD--NHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLIS 673

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
            L K    +    +  +M + G+   I  YN LI   C+S D+ +   +   +  K +  
Sbjct: 674 GLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLP 733

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           +  TY  LI   CK G   +A  +   M   GI+PD   YN L  G      + +A  L 
Sbjct: 734 NCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNVLATGCSDAADLEQALFLT 793

Query: 294 RDIKGATPNHVT-YTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEG 352
            ++      HV+ ++TL+ G+C+   L+E  +L  VM  + + P   T  +++ +  K G
Sbjct: 794 EEMFNRGYAHVSLFSTLVRGFCKRGRLQETEKLLHVMMDREIVPNAQTVENVITEFGKAG 853

Query: 353 RIRDANRLLNEMNEKK 368
           ++ +A+R+  E+ +KK
Sbjct: 854 KLCEAHRVFAELQQKK 869



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 46/216 (21%), Positives = 90/216 (41%), Gaps = 2/216 (0%)

Query: 377 NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD 436
           + L++ Y K G   +A +V   M + GL   +     L+    +A  M++  +L   M  
Sbjct: 179 DVLVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKGFMEG 238

Query: 437 AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDY 496
           AG  P   +YS  ++ +C   + +A  K+ +E   R   ++   Y  +I   C+   V+ 
Sbjct: 239 AGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEE 298

Query: 497 AQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSA 556
           A      M   G+  D+  Y +L     + G  K    +LD+M    L   + +Y +   
Sbjct: 299 AFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVD 358

Query: 557 SYAKDNEILDLF--WSHVVDRGLMSKHIFKEMQLRN 590
            + K+ +  + F   + ++  G+    I  +  +R 
Sbjct: 359 GFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRG 394


>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 603

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 150/521 (28%), Positives = 249/521 (47%), Gaps = 26/521 (4%)

Query: 77  SLQSHWTMIHILTKNKHFKSAQNMLEKIA-------LRDFLSTPSV-LNALVKIHDDPDG 128
           S+  H+T +      K  ++  + + K         L+  +STP+  LN +      P+G
Sbjct: 39  SVSHHFTKLKATRSRKRLENRVSAVSKSEASGMNGRLQQIVSTPNGDLNGIGMESSSPNG 98

Query: 129 NSHVLSWLVIFYANLKMT--------QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRL 180
            +   S+   F +N+ +         ++GL+  ++M     +P + ACT L+    +   
Sbjct: 99  VNGSRSFEE-FASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGK 157

Query: 181 TDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNT 240
           T    ++ + +   G V ++  YNVLI   CKS ++DK  ++L   E   V  D+ TYNT
Sbjct: 158 TRKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALQVL---ERMSVAPDVVTYNT 214

Query: 241 LIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KG 298
           ++   C  G   EA+ V DR  +    PD++TY  LI   C +  + +A +L  ++  KG
Sbjct: 215 ILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKG 274

Query: 299 ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDAN 358
             P+ VTY  LI+G C+   L+EA++    M   G  P V+T+N ILR +C  GR  DA 
Sbjct: 275 CKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAE 334

Query: 359 RLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGF 418
           RLL +M  K  +P  VT N LIN  C+      A+ V  +M + G M +  +Y  L+HGF
Sbjct: 335 RLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGF 394

Query: 419 CKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDV 478
           C+ K+MD A E L  M+  G  P   +Y+ L+   C     +A +++L++  S+G    +
Sbjct: 395 CQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVL 454

Query: 479 SVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDD 538
             Y  +I    K  K +YA  L   M+  G+  D + Y++L       G+      I  D
Sbjct: 455 ITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHD 514

Query: 539 MYRRRLMITLKIYRSFSASYAKDNEI---LDLFWSHVVDRG 576
           M    +  +   Y +      K  +    +D F +++V++G
Sbjct: 515 MEGLSIKPSAVTYNAIMLGLCKAQQTSRAID-FLAYMVEKG 554



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 121/478 (25%), Positives = 206/478 (43%), Gaps = 63/478 (13%)

Query: 68  ESAVPNY---KHSLQSHWTMIHI--LTKNKHFKSAQNMLEKIA----LRDFLSTPSVLNA 118
           ES+ PN      S +   + IH+  L +N   +     LE++     + D ++  S++  
Sbjct: 92  ESSSPNGVNGSRSFEEFASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRG 151

Query: 119 ------------LVKIHDDPDGNSHVLSWLVIF--YANLKMTQDGLQVFDQMRVHNLMPH 164
                       +++I ++      V+++ V+   Y         LQV ++M V    P 
Sbjct: 152 FCRSGKTRKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERMSV---APD 208

Query: 165 LHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLC 224
           +     +L SL          +V  + +Q     ++  Y +LI A C  S V +  KLL 
Sbjct: 209 VVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLD 268

Query: 225 EMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREG 284
           EM  K  + D+ TYN LI   CK+G   EA+   + M   G  P+++T+N ++   C  G
Sbjct: 269 EMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTG 328

Query: 285 RMREARRLFRDI-------------------------------------KGATPNHVTYT 307
           R  +A RL  D+                                      G  PN ++Y 
Sbjct: 329 RWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYN 388

Query: 308 TLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEK 367
            L+ G+C+   ++ A+   E+M ++G YP +VTYN++L  LCK+G+   A  +LN+++ K
Sbjct: 389 PLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSK 448

Query: 368 KIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIA 427
             +P  +T NT+I+   K+G T  A ++   M   GL  D  TY  L+ G     ++D A
Sbjct: 449 GCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEA 508

Query: 428 KELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
            ++   M      PS  +Y+ ++ G C        +  L   V +G     + Y  LI
Sbjct: 509 IKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILI 566


>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Brachypodium distachyon]
          Length = 651

 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 121/402 (30%), Positives = 207/402 (51%), Gaps = 2/402 (0%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N++ L+ +V  Y       +   V  +M    + P +    V++++  +    +    + 
Sbjct: 158 NTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMALI 217

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
             MV  G+   +  YN ++    ++   DK  ++   M+   V  D+ ++N LI  +C+ 
Sbjct: 218 DSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRA 277

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTY 306
           G   EAL     M    ++PD+V+++ LI  F R G M  A    R+++  G  P+ V Y
Sbjct: 278 GELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIY 337

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
           T +I G+CRA  + EALR+R+ M A G  P VVTYN++L  LCKE R+ DA  LLNEM E
Sbjct: 338 TMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKE 397

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
           + + PD  T  TLI+ YC+ G+   A++  + + +  L  D  TY  LI G C+  ++  
Sbjct: 398 RGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGK 457

Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
           A EL   M      P++ +YS L+D +C K   +     LDE V++G+  ++  Y ++I+
Sbjct: 458 ANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIK 517

Query: 487 RFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
            +C+   V   Q+    M+ + ++ D + Y +L + Y + G+
Sbjct: 518 GYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGK 559



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 124/441 (28%), Positives = 216/441 (48%), Gaps = 2/441 (0%)

Query: 126 PDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVW 185
           P     V   L+  Y   +  ++  + F  +  H +     A   LL +L++     +  
Sbjct: 85  PTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPIPAAASNALLAALSRAGWPHLTA 144

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
             Y+ ++      N +  N+++H+ CK+    +V+ ++ EME + V  D+ T+N ++   
Sbjct: 145 DAYRLVLSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDAR 204

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR--DIKGATPNH 303
            + G    A+A+ D M  +GI P +VTYNS++ G  R GR  +AR +FR  D  G  P+ 
Sbjct: 205 FRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDV 264

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
            ++  LI G+CRA +LEEALR  + M  + V P VV+++ ++    + G +  A   L E
Sbjct: 265 RSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLRE 324

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
           M E  + PD V    +I  +C+ G    A++V++ M+  G + D  TY  L++G CK + 
Sbjct: 325 MREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERR 384

Query: 424 MDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRA 483
           +  A+ELL  M + G  P  C+++ L+ GYC   N E  L+  D    + L  D+  Y  
Sbjct: 385 LSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNT 444

Query: 484 LIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRR 543
           LI   C++  +  A  L++ M    I  + V Y+ L  ++   G+       LD+M  + 
Sbjct: 445 LIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKG 504

Query: 544 LMITLKIYRSFSASYAKDNEI 564
           ++  +  Y S    Y +   +
Sbjct: 505 IVPNIMTYNSIIKGYCRSGNV 525



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 108/396 (27%), Positives = 202/396 (51%), Gaps = 2/396 (0%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           +VF  M    + P + +  +L+    +    +   + YK+M    V  ++  ++ LI   
Sbjct: 250 EVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLF 309

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
            +  ++D   + L EM    +  D   Y  +I  +C+ G+  EAL V+D M   G  PD+
Sbjct: 310 TRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDV 369

Query: 271 VTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREV 328
           VTYN+L++G C+E R+ +A  L  ++K  G  P+  T+TTLI GYCR  ++E+AL+  + 
Sbjct: 370 VTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDT 429

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           ++ + + P +VTYN+++  +C++G +  AN L ++M+ ++I P++VT + LI+++C+ G 
Sbjct: 430 ISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQ 489

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
             +A    + M+  G++ +  TY ++I G+C++  +   ++ L  M      P   +Y+ 
Sbjct: 490 VDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNT 549

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG 508
           L+ GY  +        LL    +  +  D   Y  +I  F     +  A  ++  M   G
Sbjct: 550 LIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARG 609

Query: 509 ILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL 544
           I  D   Y S+   +  AG  K    + D+M ++ L
Sbjct: 610 IEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKGL 645



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 107/325 (32%), Positives = 166/325 (51%), Gaps = 2/325 (0%)

Query: 155 QMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSS 214
           +MR   LMP     T+++    +  L     +V  +MV  G + ++  YN L++  CK  
Sbjct: 324 EMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKER 383

Query: 215 DVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYN 274
            +   E+LL EM+ + V  DL T+ TLI  YC+ G   +AL   D +  + + PDIVTYN
Sbjct: 384 RLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYN 443

Query: 275 SLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAK 332
           +LI G CR+G + +A  L+ D+  +   PNHVTY+ LID +C    ++ A    + M  K
Sbjct: 444 TLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNK 503

Query: 333 GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
           G+ P ++TYNSI++  C+ G +    + L +M   K+ PD +T NTLI+ Y K G    A
Sbjct: 504 GIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEA 563

Query: 393 MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
             +   M    +  D  TY  +I GF     M  A  +   M   G  P   +Y  +++G
Sbjct: 564 FNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMING 623

Query: 453 YCNKNNEEALLKLLDEFVSRGLCVD 477
           +    N +   +L DE + +GL  D
Sbjct: 624 HVVAGNSKKSFQLHDEMLQKGLAPD 648



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 118/229 (51%), Gaps = 2/229 (0%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           +  LQ FD +    L P +     L++ + +        +++  M    +  N   Y++L
Sbjct: 421 EKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSIL 480

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           I + C+   VD     L EM  K +  ++ TYN++I  YC+ G   +      +M  + +
Sbjct: 481 IDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKV 540

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFR--DIKGATPNHVTYTTLIDGYCRANDLEEALR 324
            PD++TYN+LIHG+ +EG+M EA  L +  + +   P+ VTY  +I G+    +++EA  
Sbjct: 541 MPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADW 600

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDN 373
           + + M A+G+ P   TY S++      G  + + +L +EM +K +APD+
Sbjct: 601 VYKKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKGLAPDD 649


>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 935

 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 135/478 (28%), Positives = 236/478 (49%), Gaps = 17/478 (3%)

Query: 115 VLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNS 174
           +L  ++ +   P  NS     L+  Y         L++ D+M   NL+P   +   ++N 
Sbjct: 301 ILKGMITLGCKP--NSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMING 358

Query: 175 LAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRAD 234
           L   +   +  K+ +KM   G+  N+ +Y+ LI        +++  +LL  M    V  D
Sbjct: 359 LCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPD 418

Query: 235 LFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR 294
           +F YN +I+   K G   EA      ++  G+ PD VT+ + I G+ + G+M EA + F 
Sbjct: 419 IFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFD 478

Query: 295 DI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEG 352
           ++   G  PN+  YT LI+G+ +A +L EAL +   + A GV P V T ++ +  L K G
Sbjct: 479 EMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNG 538

Query: 353 RIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYK 412
           R+++A ++ +E+ EK + PD  T ++LI+ +CK G+   A ++ + M   G+  + F Y 
Sbjct: 539 RVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYN 598

Query: 413 ALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSR 472
           AL+ G CK+ ++  A++L  GM + G  P   +YS ++DGYC   N      L  E  S+
Sbjct: 599 ALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSK 658

Query: 473 GLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKAC 532
           G+     VY AL+   CK+  ++ A  LF  M   G    ++ + +L   Y ++ + +  
Sbjct: 659 GVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKG-FATTLSFNTLIDGYCKSCKIQEA 717

Query: 533 SDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKEMQLRN 590
           S +  +M  +++M     Y +          ++D  W     +   +  +FKEMQ RN
Sbjct: 718 SQLFQEMIAKQIMPDHVTYTT----------VID--WHCKAGKMEEANLLFKEMQERN 763



 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 141/512 (27%), Positives = 249/512 (48%), Gaps = 22/512 (4%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHV 132
           N   S  S+  MI+ L   K    A  +LEK+        P+V+               V
Sbjct: 344 NLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGL--KPNVV---------------V 386

Query: 133 LSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMV 192
            S L++ YA+    ++  ++ D M    + P +     +++ L+K    +       ++ 
Sbjct: 387 YSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQ 446

Query: 193 QLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHY 252
             G+  +   +   I    K+  + +  K   EM    +  +   Y  LI  + K G   
Sbjct: 447 GRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLM 506

Query: 253 EALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLI 310
           EAL++   +   G+ PD+ T ++ IHG  + GR++EA ++F ++K  G  P+  TY++LI
Sbjct: 507 EALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLI 566

Query: 311 DGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIA 370
            G+C+  ++E+A  L + M  KG+ P +  YN+++  LCK G I+ A +L + M EK + 
Sbjct: 567 SGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLE 626

Query: 371 PDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL 430
           PD+VT +T+I+ YCK  + A A  + + M   G+    F Y AL+HG CK  +M+ A  L
Sbjct: 627 PDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNL 686

Query: 431 LFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCK 490
              ML  GF+ +  S++ L+DGYC     +   +L  E +++ +  D   Y  +I   CK
Sbjct: 687 FREMLQKGFATTL-SFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCK 745

Query: 491 KEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKI 550
             K++ A  LF  MQ   ++ D+V YTSL Y Y + G+      + + M  + +      
Sbjct: 746 AGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVT 805

Query: 551 YRSFSASYAKDNEILDLF--WSHVVDRGLMSK 580
           Y     ++ K++ +++ F     VV +G+++K
Sbjct: 806 YGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTK 837



 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 126/429 (29%), Positives = 217/429 (50%), Gaps = 36/429 (8%)

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
            ++ Y+      +  + FD+M  H LMP+    TVL+N   K         +++ +  LG
Sbjct: 460 FILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALG 519

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
           V+ ++   +  IH   K+  V +  K+  E++ K +  D+FTY++LI+ +CK+G   +A 
Sbjct: 520 VLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAF 579

Query: 256 AVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGY 313
            + D M  +GI+P+I  YN+L+ G C+ G ++ AR+LF  +  KG  P+ VTY+T+IDGY
Sbjct: 580 ELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGY 639

Query: 314 CRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEG--------------------- 352
           C++ ++ EA  L   M +KGV P    YN+++   CKEG                     
Sbjct: 640 CKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTL 699

Query: 353 -------------RIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRM 399
                        +I++A++L  EM  K+I PD+VT  T+I+ +CK G    A  +   M
Sbjct: 700 SFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEM 759

Query: 400 LEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNE 459
            E  L++D  TY +L++G+ K  +      L   M+  G  P   +Y  ++  +C ++N 
Sbjct: 760 QERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNL 819

Query: 460 EALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
               KL DE V +G+    +++  LI   CK+E +  A +L + M   G+       ++L
Sbjct: 820 VEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTL 879

Query: 520 AYAYWRAGE 528
             ++  AG+
Sbjct: 880 VRSFHEAGK 888



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 131/447 (29%), Positives = 225/447 (50%), Gaps = 18/447 (4%)

Query: 76  HSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSW 135
           H L  +  +  +L  N HFK A N++E +++   L    VL         PD    V + 
Sbjct: 483 HGLMPNNPLYTVLI-NGHFK-AGNLMEALSIFRHLHALGVL---------PD----VQTC 527

Query: 136 LVIFYANLK--MTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQ 193
               +  LK    Q+ L+VF +++   L+P +   + L++   K    +  ++++ +M  
Sbjct: 528 SAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCL 587

Query: 194 LGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYE 253
            G+  NI +YN L+   CKS D+ +  KL   M  K +  D  TY+T+I  YCK     E
Sbjct: 588 KGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAE 647

Query: 254 ALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD-IKGATPNHVTYTTLIDG 312
           A ++   M  +G+ P    YN+L+HG C+EG M +A  LFR+ ++      +++ TLIDG
Sbjct: 648 AFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDG 707

Query: 313 YCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPD 372
           YC++  ++EA +L + M AK + P  VTY +++   CK G++ +AN L  EM E+ +  D
Sbjct: 708 YCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVD 767

Query: 373 NVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLF 432
            VT  +L+  Y K+G ++    +  +M+  G+  D+ TY  +I+  CK   +  A +L  
Sbjct: 768 TVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRD 827

Query: 433 GMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKE 492
            ++  G       +  L+   C + +     KLLDE    GL   ++    L+R F +  
Sbjct: 828 EVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAG 887

Query: 493 KVDYAQRLFNLMQGNGILGDSVIYTSL 519
           K+D A R+F  ++  G++ D+     L
Sbjct: 888 KMDEATRVFEGVKSLGLVPDTTTLIDL 914



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 126/419 (30%), Positives = 200/419 (47%), Gaps = 2/419 (0%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
            F++M+   L P  +AC+ L++   ++   D V ++   MV  G+  N+  YNVLIH  C
Sbjct: 231 TFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLC 290

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           K   ++K  ++L  M     + +  T+  LI  YC++     AL + D ME+  + P  V
Sbjct: 291 KFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAV 350

Query: 272 TYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           +Y ++I+G C    +  A +L   +   G  PN V Y+TLI GY     +EEA RL + M
Sbjct: 351 SYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGM 410

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
           +  GV P +  YN+I+  L K G++ +A+  L E+  + + PD VT    I  Y K G  
Sbjct: 411 SCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKM 470

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
             A K  + ML+ GLM +   Y  LI+G  KA  +  A  +   +   G  P   + S  
Sbjct: 471 TEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAF 530

Query: 450 VDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGI 509
           + G       +  LK+  E   +GL  DV  Y +LI  FCK+ +V+ A  L + M   GI
Sbjct: 531 IHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGI 590

Query: 510 LGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLF 568
             +  IY +L     ++G+ +    + D M  + L      Y +    Y K   + + F
Sbjct: 591 APNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAF 649



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 148/593 (24%), Positives = 263/593 (44%), Gaps = 64/593 (10%)

Query: 13  FIKTISAIMLKGHWAKLL-NPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAES-- 69
           F + IS  + + +W  ++ + +I S L    I  VL    N    P     FF W++S  
Sbjct: 41  FSQQISDFLKQNNWKTIMVSSHIPSKLNPDVIRAVLHQ--NQVGDPKRLLDFFYWSQSQM 98

Query: 70  AVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGN 129
            VP +   L S   +   L  ++ F  A  +L ++ +R   S+ S+L++++    +  G+
Sbjct: 99  GVPQF---LDSFSILAVQLCNSELFGLANGVLTQM-IRTPYSSSSILDSVLFWFRNYGGS 154

Query: 130 SHVL-SWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           S V+   L+  Y  + M  +   VF   +  +++  L  C    NSL             
Sbjct: 155 SPVVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRC----NSL------------- 197

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
           + M + G+V N + Y ++    C++  +++ +    EM+   ++ D    + LI  + ++
Sbjct: 198 RSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMRE 257

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTY 306
           G   E L ++D M   GI  +++TYN LIHG C+ G+M +A  + + +   G  PN  T+
Sbjct: 258 GDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTF 317

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLC----------------- 349
             LI+GYCR +++  AL L + M  + + P  V+Y +++  LC                 
Sbjct: 318 CLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTF 377

Query: 350 ------------------KEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTAS 391
                              EGRI +A RLL+ M+   +APD    N +I+   K G    
Sbjct: 378 SGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEE 437

Query: 392 AMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVD 451
           A      +   GL  D  T+ A I G+ K  +M  A +    MLD G  P+   Y+ L++
Sbjct: 438 ASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLIN 497

Query: 452 GYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILG 511
           G+    N    L +     + G+  DV    A I    K  +V  A ++F+ ++  G++ 
Sbjct: 498 GHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVP 557

Query: 512 DSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
           D   Y+SL   + + GE +   ++ D+M  + +   + IY +      K  +I
Sbjct: 558 DVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDI 610



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 88/308 (28%), Positives = 156/308 (50%), Gaps = 2/308 (0%)

Query: 261 MEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRAND 318
           M  +G+ P+  TY  +  G CR  RM EA+  F +++  G  P++   + LIDG+ R  D
Sbjct: 200 MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 259

Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT 378
           ++E LR+++VM + G+   ++TYN ++  LCK G++  A  +L  M      P++ T   
Sbjct: 260 IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 319

Query: 379 LINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAG 438
           LI  YC+  +   A+++ + M +  L+    +Y A+I+G C  K++ +A +LL  M  +G
Sbjct: 320 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 379

Query: 439 FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQ 498
             P+   YS L+ GY ++   E   +LLD     G+  D+  Y A+I    K  K++ A 
Sbjct: 380 LKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAS 439

Query: 499 RLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASY 558
                +QG G+  D+V + +    Y + G+    +   D+M    LM    +Y      +
Sbjct: 440 TYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGH 499

Query: 559 AKDNEILD 566
            K   +++
Sbjct: 500 FKAGNLME 507


>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 777

 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 121/367 (32%), Positives = 200/367 (54%), Gaps = 2/367 (0%)

Query: 155 QMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSS 214
           +M + N  P+    T+L++ L ++       +++ ++++ G  AN    N LIH  C++ 
Sbjct: 397 EMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAG 456

Query: 215 DVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYN 274
             ++  KLL EM  + +  D  +YNTLI   CK+G   E   +++ M R GI PD+ TYN
Sbjct: 457 SKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYN 516

Query: 275 SLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAK 332
            L+HG C  G++ EA  L+ + K  G  P+  TY  +IDGYC+AN +EE  +L + M   
Sbjct: 517 MLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTM 576

Query: 333 GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
            +    V Y +++R  C+ G +R+A RL ++M  + I   + T ++LI+    IG   SA
Sbjct: 577 KIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSA 636

Query: 393 MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
            ++ + M + GL  +   Y ALI G+CK  +M     +L  M      P+  +Y+ +++G
Sbjct: 637 NQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMING 696

Query: 453 YCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGD 512
           +C   N +A  KLL+E   +G+  D   Y AL   FCK+ K++ A ++ +LM   GI  D
Sbjct: 697 HCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGISLD 756

Query: 513 SVIYTSL 519
            + YT+L
Sbjct: 757 DITYTTL 763



 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 128/456 (28%), Positives = 218/456 (47%), Gaps = 37/456 (8%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
            ++F  +    L P L  C  LL+SL K     M ++V+  M   GV  +++L++ +++A
Sbjct: 147 FELFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNA 206

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
            C    VD   +L  +ME   V  ++ TYN +I   CK G   EA   +++ME+E + P 
Sbjct: 207 FCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPS 266

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLRE 327
           +VTY  LI+G  +  R  EA  + +++  +G  PN+V Y TLIDGYCR  ++  AL++R+
Sbjct: 267 LVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRD 326

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM-------NE-------------- 366
            M + G+ P  VT NS+++  CK  ++  A  LL EM       N+              
Sbjct: 327 DMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKC 386

Query: 367 --------------KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYK 412
                         +   P++     L++  C+ G  + A+++  R+LE G   +  T  
Sbjct: 387 RFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSN 446

Query: 413 ALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSR 472
           ALIHG C+A   + A +LL  ML+ G      SY+ L+   C +   E   KL +E V R
Sbjct: 447 ALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRR 506

Query: 473 GLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKAC 532
           G+  D+  Y  L+   C   K++ A  L++  + NG   D+  Y  +   Y +A   +  
Sbjct: 507 GIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEG 566

Query: 533 SDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLF 568
             +  +M   ++     +Y +   +Y ++  + + F
Sbjct: 567 EKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAF 602



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 142/512 (27%), Positives = 222/512 (43%), Gaps = 84/512 (16%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           QVFD M    + P ++  + ++N+       D   ++++KM ++GV  N+  YN +IH  
Sbjct: 183 QVFDIMCHCGVTPDVYLFSTMVNAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGL 242

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTY-------------------------------- 238
           CK+  +D+  +   +ME + V+  L TY                                
Sbjct: 243 CKNGRLDEAFQFKEKMEKERVKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNN 302

Query: 239 ---NTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD 295
              NTLI  YC+ G    AL ++D M   GISP+ VT NSLI G+C+  +M  A  L  +
Sbjct: 303 VVYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEE 362

Query: 296 I--KGATPNHVTYTT-----------------------------------LIDGYCRAND 318
           +   G   N  T+T+                                   L+ G C+   
Sbjct: 363 MLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGK 422

Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT 378
             EA+ L   +  KG     VT N+++  LC+ G   +A +LL EM E+ +  D+++ NT
Sbjct: 423 QSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNT 482

Query: 379 LINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAG 438
           LI A CK G      K+K  M+  G+  D +TY  L+HG C   +++ A  L       G
Sbjct: 483 LILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNG 542

Query: 439 FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQ 498
             P   +Y  ++DGYC  N  E   KL  E V+  +  +  VY  LIR +C+   +  A 
Sbjct: 543 NFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAF 602

Query: 499 RLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASY 558
           RL + M+  GI   S  Y+SL +     G   + + +LD+M +  L   +  Y +    Y
Sbjct: 603 RLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGY 662

Query: 559 AKDNEILDLFWSHVVDRGLMSKHIFKEMQLRN 590
            K  ++      H VD       I +EM + N
Sbjct: 663 CKLGQM------HKVDS------ILQEMSINN 682



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 124/492 (25%), Positives = 223/492 (45%), Gaps = 19/492 (3%)

Query: 75  KHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLS 134
           K SL ++  +I+ L K + F  A  +L++++ R +     V N L+      DG      
Sbjct: 264 KPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLI------DG------ 311

Query: 135 WLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQL 194
                Y  +      LQ+ D M  + + P+   C  L+    K    +    + ++M+  
Sbjct: 312 -----YCRIGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTG 366

Query: 195 GVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEA 254
           G V N   +  +IH  C     D     + EM  ++ + +      L++  C+ G   EA
Sbjct: 367 GGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEA 426

Query: 255 LAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDG 312
           + +  R+  +G + + VT N+LIHG C  G   EA +L +++  +G   + ++Y TLI  
Sbjct: 427 IELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILA 486

Query: 313 YCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPD 372
            C+   +EE  +L+E M  +G+ P + TYN +L  LC  G+I +A  L +E  +    PD
Sbjct: 487 CCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPD 546

Query: 373 NVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLF 432
             T   +I+ YCK        K+   M+   +  +   Y  LI  +C+   M  A  L  
Sbjct: 547 AYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRD 606

Query: 433 GMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKE 492
            M   G   +  +YS L+ G  N    ++  +LLDE    GL  +V  Y ALI  +CK  
Sbjct: 607 DMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLG 666

Query: 493 KVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYR 552
           ++     +   M  N +  + + YT +   + + G  KA + +L++M ++ ++     Y 
Sbjct: 667 QMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYN 726

Query: 553 SFSASYAKDNEI 564
           + +  + K+ ++
Sbjct: 727 ALTNGFCKEGKM 738



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 90/277 (32%), Positives = 145/277 (52%), Gaps = 2/277 (0%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           ++G ++ ++M    + P ++   +LL+ L      +    ++ +  + G   + + Y ++
Sbjct: 494 EEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIM 553

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           I   CK++ V++ EKL  EM    +  +   Y TLI  YC+ G   EA  ++D M   GI
Sbjct: 554 IDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGI 613

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALR 324
                TY+SLIHG    G +  A +L  +++  G +PN V YT LI GYC+   + +   
Sbjct: 614 PQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDS 673

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           + + M+   V+P  +TY  ++   CK G ++ A +LLNEM +K I PD VT N L N +C
Sbjct: 674 ILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFC 733

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKA 421
           K G    A+KV + M   G+ LD  TY  LI G+ K 
Sbjct: 734 KEGKMEEALKVCDLMSTGGISLDDITYTTLIDGWHKP 770



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 56/182 (30%), Positives = 82/182 (45%), Gaps = 11/182 (6%)

Query: 99  NMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRV 158
           NM E   LRD + +  +              S   S L+   +N+ +     Q+ D+MR 
Sbjct: 597 NMREAFRLRDDMRSRGIPQT-----------SATYSSLIHGLSNIGLVDSANQLLDEMRK 645

Query: 159 HNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDK 218
             L P++   T L+    K      V  + ++M    V  N   Y ++I+  CK  ++  
Sbjct: 646 EGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKA 705

Query: 219 VEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIH 278
             KLL EM  K +  D  TYN L   +CK+G   EAL V D M   GIS D +TY +LI 
Sbjct: 706 AAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGISLDDITYTTLID 765

Query: 279 GF 280
           G+
Sbjct: 766 GW 767


>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Cucumis sativus]
          Length = 857

 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 142/512 (27%), Positives = 246/512 (48%), Gaps = 29/512 (5%)

Query: 77  SLQSHWTMIHILTKNKHFKSAQNMLEK--------------IALRDFLSTPSVLNALVKI 122
           S+QS+  +++IL +  +F  A  +  +              I ++ F  T     AL  +
Sbjct: 110 SVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLL 169

Query: 123 HDDPDGNS--HVLSWLVIFYANLKMT--QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKD 178
           ++ P      + +S+  +     K     +   +FD+M    + P +     L++ L K 
Sbjct: 170 NNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKK 229

Query: 179 RLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTY 238
                  K++ K+++ GV  N+  +N+ I   C+   +D+  +LL  +  + +  D+ +Y
Sbjct: 230 GNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISY 289

Query: 239 NTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--I 296
           NTLI  +CK     EA     +M   G+ P+  TYN++I+GFC+ G M+ A ++ RD   
Sbjct: 290 NTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMF 349

Query: 297 KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRD 356
           KG  P+  TY++LI+G C   D+  A+ +      KG    ++ YN++++ L K+G +  
Sbjct: 350 KGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQ 409

Query: 357 ANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIH 416
           A +L+ +M E   +PD  T N ++N  CK+G  + A  + N  +  G + D FT+  LI 
Sbjct: 410 ALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLID 469

Query: 417 GFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCV 476
           G+CK + MD A E+L  ML  G +P   +Y+ L++G C     + ++      + +G   
Sbjct: 470 GYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTP 529

Query: 477 DVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDIL 536
           ++  Y  LI  FCK  KV  A  LF  M+  G+  D V   +L       GE       L
Sbjct: 530 NIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGE-------L 582

Query: 537 DDMYRRRLMITLKIYRSFSASYAKDNEILDLF 568
           D  Y   L +T++    FS S A  N +++ F
Sbjct: 583 DKAY--ELFVTIEKEYKFSYSTAIFNIMINAF 612



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 100/391 (25%), Positives = 184/391 (47%), Gaps = 3/391 (0%)

Query: 127 DGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWK 186
           + N    + ++  +    M Q+  ++         +P     + L+N L  D   +    
Sbjct: 318 EPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMA 377

Query: 187 VYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYC 246
           V+ + ++ G   +I LYN L+    K   V +  +L+ +M       D++TYN ++   C
Sbjct: 378 VFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLC 437

Query: 247 KKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHV 304
           K G   +A  + +    +G  PDI T+N+LI G+C++  M +A  +   +   G TP+ +
Sbjct: 438 KMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVI 497

Query: 305 TYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM 364
           TY TL++G C+A  L+  +   + M  KG  P ++TYN ++   CK+ ++ +A  L  EM
Sbjct: 498 TYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEM 557

Query: 365 NEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRM-LEAGLMLDQFTYKALIHGFCKAKE 423
             + + PD VT  TLI   C  G+   A ++   +  E         +  +I+ FC+   
Sbjct: 558 KTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLN 617

Query: 424 MDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRA 483
           + +A++L   M  +  +P   +Y  ++D YC   N +     L E +S+GL    +    
Sbjct: 618 VSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGK 677

Query: 484 LIRRFCKKEKVDYAQRLFNLMQGNGILGDSV 514
           ++   C   ++  A  + NLM  NGI+ + V
Sbjct: 678 VLNCLCVTHRLSEAVVIINLMVQNGIVPEEV 708



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 101/414 (24%), Positives = 194/414 (46%), Gaps = 20/414 (4%)

Query: 137 VIFYANLKMTQDGLQVFDQMRVHNLMPH-LHACTVLLNSLA--------KDRLTDMVWKV 187
           VI Y N  +  + L++F+Q++  +   H L     ++  L         +D L +M   V
Sbjct: 13  VIRYQNDPL--NALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRKNV 70

Query: 188 YKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCK 247
             KM++   +  +  Y        +   V +   +   M+F D    + +YN ++ +  +
Sbjct: 71  DSKMLEGVYIGIMRDYG-------RKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVE 123

Query: 248 KGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVT 305
            G   +A  V  RM+  GI PD+ T+   +  FC  GR   A RL  ++  +G   N V+
Sbjct: 124 YGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVS 183

Query: 306 YTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMN 365
           Y  +I G+ + N   EA  L + M  +G+ P ++T+N ++  LCK+G ++++ +L +++ 
Sbjct: 184 YCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVM 243

Query: 366 EKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMD 425
           ++ + P+  T N  I   C+ G    A ++   ++  GL  D  +Y  LI GFCK  ++ 
Sbjct: 244 KRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLV 303

Query: 426 IAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
            A+  L  M+++G  P+  +Y+ +++G+C     +   K+L + + +G   D   Y +LI
Sbjct: 304 EAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLI 363

Query: 486 RRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
              C    ++ A  +F      G     ++Y +L     + G       ++ DM
Sbjct: 364 NGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDM 417



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 89/375 (23%), Positives = 169/375 (45%), Gaps = 5/375 (1%)

Query: 195 GVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLF--TYNTLIALYCKKGMHY 252
           G    +  Y  +I         + +E +L EM  K+V + +    Y  ++  Y +KG   
Sbjct: 35  GFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMR-KNVDSKMLEGVYIGIMRDYGRKGKVQ 93

Query: 253 EALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLI 310
           EA+ V +RM+     P + +YN++++     G   +A +++  +K  G  P+  T+T  +
Sbjct: 94  EAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRM 153

Query: 311 DGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIA 370
             +C       ALRL   M  +G     V+Y +++    KE    +A  L +EM ++ I 
Sbjct: 154 KSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGIC 213

Query: 371 PDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL 430
           PD +T N LI+  CK G+   + K+ +++++ G+  + FT+   I G C+   +D A  L
Sbjct: 214 PDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARL 273

Query: 431 LFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCK 490
           L  ++  G +P   SY+ L+ G+C  +        L + V+ G+  +   Y  +I  FCK
Sbjct: 274 LESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCK 333

Query: 491 KEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKI 550
              +  A ++       G + D   Y+SL       G+      +  +   +    ++ +
Sbjct: 334 AGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIIL 393

Query: 551 YRSFSASYAKDNEIL 565
           Y +     +K   +L
Sbjct: 394 YNTLVKGLSKQGLVL 408



 Score =  118 bits (295), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 88/342 (25%), Positives = 154/342 (45%), Gaps = 21/342 (6%)

Query: 54  CHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKN----KHFKSAQNMLEKIALRDF 109
           C+   ++ A   + E+    +KHS+  + T++  L+K     +  +  ++M+E     D 
Sbjct: 367 CNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDI 426

Query: 110 LSTPSVLNALVKIHDDPDGNS--------------HVLSWLVIFYANLKMTQDGLQVFDQ 155
            +   V+N L K+    D N                  + L+  Y   +     +++ D 
Sbjct: 427 WTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDT 486

Query: 156 MRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSD 215
           M  H + P +     LLN L K R  D V   +K M++ G   NI  YN+LI + CK   
Sbjct: 487 MLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRK 546

Query: 216 VDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMERE-GISPDIVTYN 274
           V +  +L  EM+ + +  D+ T  TLI   C  G   +A  +   +E+E   S     +N
Sbjct: 547 VSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFN 606

Query: 275 SLIHGFCREGRMREARRLFRDIKGA--TPNHVTYTTLIDGYCRANDLEEALRLREVMAAK 332
            +I+ FC +  +  A +LF  + G+   P++ TY  +ID YC+  +++ A        +K
Sbjct: 607 IMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISK 666

Query: 333 GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNV 374
           G+ P   T   +L  LC   R+ +A  ++N M +  I P+ V
Sbjct: 667 GLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVPEEV 708



 Score = 78.6 bits (192), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 53/235 (22%), Positives = 104/235 (44%), Gaps = 6/235 (2%)

Query: 332 KGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTAS 391
           +GVY G      I+R   ++G++++A  +   M+     P   + N ++N   + G  + 
Sbjct: 76  EGVYIG------IMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQ 129

Query: 392 AMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVD 451
           A KV  RM + G+  D +T+   +  FC       A  LL  M   G   +  SY  ++ 
Sbjct: 130 AHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVIS 189

Query: 452 GYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILG 511
           G+  +N +     L DE + +G+C D+  +  LI   CKK  V  +++LF+ +   G+  
Sbjct: 190 GFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCP 249

Query: 512 DSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
           +   +        R G     + +L+ +    L   +  Y +    + K +++++
Sbjct: 250 NLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVE 304


>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
 gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
          Length = 564

 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 130/406 (32%), Positives = 215/406 (52%), Gaps = 13/406 (3%)

Query: 149 GLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIH 208
           G+++F+++      P +     L++SL K    +   +++  M   G V N+  Y+VLI+
Sbjct: 56  GMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLIN 115

Query: 209 ACCKSSDVDKVEKLLCEMEFK--DVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG- 265
             CK   +D+  +L+ EM  K  DV  ++ TYN+ +   CK+ M  EA  +  R  R+G 
Sbjct: 116 GLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELM-RSLRDGS 174

Query: 266 --ISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEE 321
             +SPD VT+++LI G C+ G++ EA  +F D+   G  PN +TY  L++G C+A+ +E 
Sbjct: 175 LRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMER 234

Query: 322 ALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKK-----IAPDNVTC 376
           A  + E M  KGV P V+TY+ ++   CK  R+ +A  LL+ M  +      + PD VT 
Sbjct: 235 AHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTF 294

Query: 377 NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD 436
           N LI   CK G+   A  +   M+   L  D  T+ ALI G CKA +++ A+++L  M +
Sbjct: 295 NILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGN 354

Query: 437 AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDY 496
            G  P+  +Y+ LV G C     E   + L+E VS G   D   Y +L+   C+  + D 
Sbjct: 355 LGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDD 414

Query: 497 AQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRR 542
           A +L + ++  G   D+V Y  L    W++G+ +    +L++M  +
Sbjct: 415 ALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGK 460



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 117/393 (29%), Positives = 203/393 (51%), Gaps = 12/393 (3%)

Query: 146 TQDGLQVF-DQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYN 204
           T   L++F  +M    + P +     ++N L K        ++++++V+ G   ++  YN
Sbjct: 17  TARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEELVERGHHPDVVTYN 76

Query: 205 VLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMERE 264
            LI + CK+ D+++  +L  +M  +    ++ TY+ LI   CK G   EA  +   M R+
Sbjct: 77  TLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRK 136

Query: 265 G--ISPDIVTYNSLIHGFCREGRMREARRLFRDIKGA----TPNHVTYTTLIDGYCRAND 318
              + P+I+TYNS + G C++    EA  L R ++      +P+ VT++TLIDG C+   
Sbjct: 137 SCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQ 196

Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT 378
           ++EA  + + M A G  P V+TYN+++  LCK  ++  A+ ++  M +K + PD +T + 
Sbjct: 197 IDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSV 256

Query: 379 LINAYCKIGDTASAMKVKNRMLEAG-----LMLDQFTYKALIHGFCKAKEMDIAKELLFG 433
           L++A+CK      A+++ + M   G     L+ D+ T+  LI G CKA   + A  L   
Sbjct: 257 LVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEE 316

Query: 434 MLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEK 493
           M+     P   ++  L+DG C     EA   +LD   + G+  +V  Y AL+   CK  +
Sbjct: 317 MVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGR 376

Query: 494 VDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRA 526
           ++ A +    M  +G + DS+ Y SL YA  RA
Sbjct: 377 IEEACQFLEEMVSSGCVPDSITYGSLVYALCRA 409



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 120/382 (31%), Positives = 198/382 (51%), Gaps = 12/382 (3%)

Query: 170 VLLNSLAKDRLTDMVWKVYK-KMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEF 228
           ++L SL +   T    ++++ +M + GV   I  YN +I+  CKS+D+    +L  E+  
Sbjct: 6   IVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEELVE 65

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
           +    D+ TYNTLI   CK G   EA  +   M   G  P++VTY+ LI+G C+ GR+ E
Sbjct: 66  RGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDE 125

Query: 289 ARRLFRDIKGAT----PNHVTYTTLIDGYCRANDLEEALRLREVM--AAKGVYPGVVTYN 342
           AR L +++   +    PN +TY + +DG C+ +   EA  L   +   +  V P  VT++
Sbjct: 126 ARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFS 185

Query: 343 SILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEA 402
           +++  LCK G+I +A  + ++M      P+ +T N L+N  CK      A  +   M++ 
Sbjct: 186 TLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDK 245

Query: 403 GLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY-----CSYSWLVDGYCNKN 457
           G+  D  TY  L+  FCKA  +D A ELL GM   G +P+       +++ L+ G C   
Sbjct: 246 GVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAG 305

Query: 458 NEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYT 517
           N E    L +E V++ L  DV  + ALI   CK  +V+ A+ + +LM   G+  + V Y 
Sbjct: 306 NFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYN 365

Query: 518 SLAYAYWRAGEPKACSDILDDM 539
           +L +   ++G  +     L++M
Sbjct: 366 ALVHGLCKSGRIEEACQFLEEM 387



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 104/361 (28%), Positives = 180/361 (49%), Gaps = 9/361 (2%)

Query: 144 KMTQDGLQVFDQMRVHNL--MPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIH 201
            MT +  ++   +R  +L   P     + L++ L K    D    V+  M+  G V N+ 
Sbjct: 158 SMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVI 217

Query: 202 LYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRM 261
            YN L++  CK+  +++   ++  M  K V  D+ TY+ L+  +CK     EAL +   M
Sbjct: 218 TYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGM 277

Query: 262 EREGISPDI-----VTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYC 314
              G +P++     VT+N LI G C+ G   +A  LF ++  K   P+ +T+  LIDG C
Sbjct: 278 ASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLC 337

Query: 315 RANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNV 374
           +A  +E A  + ++M   GV P VVTYN+++  LCK GRI +A + L EM      PD++
Sbjct: 338 KAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSI 397

Query: 375 TCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGM 434
           T  +L+ A C+   T  A+++ + +   G   D  TY  L+ G  K+ + + A  +L  M
Sbjct: 398 TYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEM 457

Query: 435 LDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKV 494
           +  G  P   +++    G     N    ++LL   +++G+  D +   +++   C+  K+
Sbjct: 458 VGKGHQPDSFTFAACFSGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILDWVCRSGKL 517

Query: 495 D 495
           D
Sbjct: 518 D 518



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 120/491 (24%), Positives = 232/491 (47%), Gaps = 29/491 (5%)

Query: 67  AESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALR----DFLSTPSVLNALVK- 121
            E A      ++ ++ T+I+ L K+    +   + E++  R    D ++  +++++L K 
Sbjct: 26  GEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEELVERGHHPDVVTYNTLIDSLCKA 85

Query: 122 --------IHDDPDGNS---HVLSWLVIFYANLKMTQ--DGLQVFDQM--RVHNLMPHLH 166
                   +H D        +V+++ V+     K+ +  +  ++  +M  +  +++P++ 
Sbjct: 86  GDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNII 145

Query: 167 ACTVLLNSLAKDRLTDMVWKVYKKM--VQLGVVANIHLYNVLIHACCKSSDVDKVEKLLC 224
                L+ L K  +T    ++ + +    L V  +   ++ LI   CK   +D+   +  
Sbjct: 146 TYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFD 205

Query: 225 EMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREG 284
           +M       ++ TYN L+   CK      A A+ + M  +G++PD++TY+ L+  FC+  
Sbjct: 206 DMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKAS 265

Query: 285 RMREARRLFRDI--KGATPN-----HVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPG 337
           R+ EA  L   +  +G TPN      VT+  LI G C+A + E+A  L E M AK + P 
Sbjct: 266 RVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPD 325

Query: 338 VVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKN 397
           V+T+ +++  LCK G++  A  +L+ M    + P+ VT N L++  CK G    A +   
Sbjct: 326 VMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLE 385

Query: 398 RMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKN 457
            M+ +G + D  TY +L++  C+A   D A +L+  +   G+ P   +Y+ LVDG     
Sbjct: 386 EMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSG 445

Query: 458 NEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYT 517
             E  + +L+E V +G   D   + A      +   +     L  ++   G+L D+   +
Sbjct: 446 KTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTMELLRVVLAKGMLPDATTCS 505

Query: 518 SLAYAYWRAGE 528
           S+     R+G+
Sbjct: 506 SILDWVCRSGK 516



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 106/351 (30%), Positives = 169/351 (48%), Gaps = 9/351 (2%)

Query: 126 PDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVW 185
           PD  +   S L+          +   VFD M     +P++     L+N L K    +   
Sbjct: 179 PD--TVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAH 236

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA-----DLFTYNT 240
            + + MV  GV  ++  Y+VL+ A CK+S VD+  +LL  M  +         D  T+N 
Sbjct: 237 AMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNI 296

Query: 241 LIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--G 298
           LIA  CK G   +A A+ + M  + + PD++T+ +LI G C+ G++  AR +   +   G
Sbjct: 297 LIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLG 356

Query: 299 ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDAN 358
             PN VTY  L+ G C++  +EEA +  E M + G  P  +TY S++  LC+  R  DA 
Sbjct: 357 VPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDAL 416

Query: 359 RLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGF 418
           +L++E+      PD VT N L++   K G T  A+ V   M+  G   D FT+ A   G 
Sbjct: 417 QLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGL 476

Query: 419 CKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEF 469
            ++  +    ELL  +L  G  P   + S ++D  C     + +  ++ EF
Sbjct: 477 HRSGNLAGTMELLRVVLAKGMLPDATTCSSILDWVCRSGKLDDVKAMIKEF 527



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 84/280 (30%), Positives = 137/280 (48%), Gaps = 7/280 (2%)

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDI---KGATPNHVTYTTLIDGYCRANDLEEALRLR 326
           +  YN ++   CR G    A  +FR      G  P  VTY T+I+G C++NDL   + L 
Sbjct: 1   VADYNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELF 60

Query: 327 EVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKI 386
           E +  +G +P VVTYN+++  LCK G + +A RL  +M+ +   P+ VT + LIN  CK+
Sbjct: 61  EELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKV 120

Query: 387 GDTASAMKVKNRML--EAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGF--SPS 442
           G    A ++   M      ++ +  TY + + G CK      A EL+  + D     SP 
Sbjct: 121 GRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPD 180

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             ++S L+DG C     +    + D+ ++ G   +V  Y AL+   CK +K++ A  +  
Sbjct: 181 TVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIE 240

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRR 542
            M   G+  D + Y+ L  A+ +A       ++L  M  R
Sbjct: 241 SMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASR 280



 Score = 46.6 bits (109), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 36/181 (19%), Positives = 70/181 (38%), Gaps = 35/181 (19%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           + D M    + P++     L++ L K    +   +  ++MV  G V +   Y  L++A C
Sbjct: 348 ILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALC 407

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           ++S  D   +L+ E++      D  TYN L+    K G   +A+ V + M  +G  PD  
Sbjct: 408 RASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSF 467

Query: 272 TYNSLIHGF-----------------------------------CREGRMREARRLFRDI 296
           T+ +   G                                    CR G++ + + + ++ 
Sbjct: 468 TFAACFSGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILDWVCRSGKLDDVKAMIKEF 527

Query: 297 K 297
           +
Sbjct: 528 E 528


>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 718

 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 140/491 (28%), Positives = 244/491 (49%), Gaps = 21/491 (4%)

Query: 76  HSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSW 135
           H L  + T++  LT++  F S   +L+++      S+ S+ NA               + 
Sbjct: 53  HPLPPNETLLLQLTQSSSFDSITTLLKQLK-----SSGSIPNA------------TTFAT 95

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           L+  + N    ++ L++ +        P  +   + LN+L +D    +V  ++ KMV  G
Sbjct: 96  LIQSFTNFHEIENLLKILENEL--GFKPDTNFYNIALNALVEDNKLKLVEMLHSKMVNEG 153

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
           +V ++  +NVLI A CK+  +     +L EM    ++ D  T+ TL+  + ++G    AL
Sbjct: 154 IVLDVSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGAL 213

Query: 256 AVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGY 313
            ++ +M   G     V+   L++GFC+EGR+ EA R   ++  +G +P+ VT+ +L++G+
Sbjct: 214 KMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGF 273

Query: 314 CRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDN 373
           CR  ++ +AL + + M  KG  P V TYNS++  +CK G    A  +L +M  ++ +P+ 
Sbjct: 274 CRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNT 333

Query: 374 VTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFG 433
           VT NTLI+A CK  +  +A  +   ++  GL+ D  T+  LI G C +K  DIA E+   
Sbjct: 334 VTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEE 393

Query: 434 MLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEK 493
           M + G  P   +YS L+D  C +   +  L LL E  S G   +  VY  LI   CK  +
Sbjct: 394 MKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRR 453

Query: 494 VDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRS 553
           ++ A+ +F+ M+  G+   SV Y +L     +    +  S ++D M    L      Y S
Sbjct: 454 IEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNS 513

Query: 554 FSASYAKDNEI 564
               + +  +I
Sbjct: 514 LLTYFCRVGDI 524



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 114/402 (28%), Positives = 195/402 (48%), Gaps = 2/402 (0%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           + ++M  H L P     T L+    ++   +   K+ K+M+  G +       VL++  C
Sbjct: 180 MLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFC 239

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           K   V++  + + E+  +    D  T+N+L+  +C+ G   +AL + D M  +G  PD+ 
Sbjct: 240 KEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVY 299

Query: 272 TYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           TYNSLI G C+ G   +A  + +   ++  +PN VTY TLI   C+ N++E A  L  ++
Sbjct: 300 TYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARIL 359

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
            +KG+ P V T+N++++ LC       A  +  EM  K   PD  T + LI++ C     
Sbjct: 360 VSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRL 419

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
             A+ +   M  +G   +   Y  LI G CK++ ++ A+E+   M   G S S  +Y+ L
Sbjct: 420 KEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTL 479

Query: 450 VDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGI 509
           +DG C     E   +L+D+ +  GL  D   Y +L+  FC+   ++ A  +   M  NG 
Sbjct: 480 IDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGC 539

Query: 510 LGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIY 551
             D   Y +L     RAG     S +L  +  + +++T   Y
Sbjct: 540 EPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAY 581



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 98/341 (28%), Positives = 168/341 (49%), Gaps = 2/341 (0%)

Query: 191 MVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGM 250
           M++ G   +++ YN LI   CK  + +K  ++L +M  ++   +  TYNTLI+  CK+  
Sbjct: 289 MIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENE 348

Query: 251 HYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTT 308
              A  +   +  +G+ PD+ T+N+LI G C       A  +F ++K  G  P+  TY+ 
Sbjct: 349 IEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSI 408

Query: 309 LIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKK 368
           LID  C    L+EAL L + M + G     V YN+++  LCK  RI DA  + ++M    
Sbjct: 409 LIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLG 468

Query: 369 IAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAK 428
           ++  +VT NTLI+  CK      A ++ ++M+  GL  D+FTY +L+  FC+  +++ A 
Sbjct: 469 VSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAG 528

Query: 429 ELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRF 488
           +++  M   G  P   +Y  L+ G C     +   KLL     +G+ +    Y  +I+  
Sbjct: 529 DIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQAL 588

Query: 489 CKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEP 529
             +++     RLF  M       D++ +  +       G P
Sbjct: 589 FMRKRTKEGMRLFREMMEKSDPPDALTHKIVFRGLCNGGGP 629



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 109/421 (25%), Positives = 192/421 (45%), Gaps = 42/421 (9%)

Query: 115 VLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNS 174
           +++ +++   DPD   +  + L+     L   +  +++  QM +    P+      L+++
Sbjct: 285 IVDFMIEKGFDPD--VYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISA 342

Query: 175 LAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRAD 234
           L K+   +    + + +V  G++ ++  +N LI   C S + D   ++  EM+ K  + D
Sbjct: 343 LCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPD 402

Query: 235 LFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR 294
            FTY+ LI   C +    EAL +   ME  G + + V YN+LI G C+  R+ +A  +F 
Sbjct: 403 EFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFD 462

Query: 295 DIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEG 352
            ++  G + + VTY TLIDG C+   +EEA +L + M  +G+ P   TYNS+L   C+ G
Sbjct: 463 QMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVG 522

Query: 353 RIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG--DTAS------------------- 391
            I  A  ++  M      PD  T  TLI   C+ G  D AS                   
Sbjct: 523 DIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYN 582

Query: 392 --------------AMKVKNRMLEAGLMLDQFTYKALIHGFCKAK-EMDIAKELLFGMLD 436
                          M++   M+E     D  T+K +  G C     +  A +    ML+
Sbjct: 583 PVIQALFMRKRTKEGMRLFREMMEKSDPPDALTHKIVFRGLCNGGGPIQEAIDFTVEMLE 642

Query: 437 AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDY 496
            G  P + S+ +L +G C+ + E+ L++L++  + +    +     ++IR F K  K + 
Sbjct: 643 KGILPEFPSFGFLAEGLCSLSMEDTLIELINMVMEKAQMSERET--SMIRGFLKIRKFND 700

Query: 497 A 497
           A
Sbjct: 701 A 701


>gi|125548610|gb|EAY94432.1| hypothetical protein OsI_16202 [Oryza sativa Indica Group]
 gi|125590647|gb|EAZ30997.1| hypothetical protein OsJ_15079 [Oryza sativa Japonica Group]
          Length = 485

 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 120/375 (32%), Positives = 197/375 (52%), Gaps = 5/375 (1%)

Query: 188 YKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCK 247
           Y +++  G+     L+NVL+    +  ++   + +  EM+ + VR  + ++NT+I+  C+
Sbjct: 104 YLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCR 163

Query: 248 KGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVT 305
            G    A  +  RM   G++PD+ TY +LI G CR GR+ +AR +F  +  +G  PN V 
Sbjct: 164 AGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVV 223

Query: 306 YTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMN 365
           +T LID +C+  D E  L L   M  +GV P  VTYN+I+  LC+   ++ A+ ++ EM 
Sbjct: 224 FTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMR 283

Query: 366 EKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMD 425
              + PD VT  TLI+ YCK  +   AM++K  M+  G+ LD+ TY ALI G  KA    
Sbjct: 284 SAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSA 343

Query: 426 IAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
            A+ +L  M++AG  P   +Y+ ++D +C K + +  L+LL E  ++G    V  Y  ++
Sbjct: 344 DAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIM 403

Query: 486 RRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
             FCK  ++  A  L N M   G+  D + Y  L   + + G+    +DI +    +  +
Sbjct: 404 NGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCKHGK---VTDIEELKSAKGTV 460

Query: 546 ITLKIYRSFSASYAK 560
             L +Y S      K
Sbjct: 461 PDLGVYTSIVGEIVK 475



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 102/343 (29%), Positives = 184/343 (53%), Gaps = 5/343 (1%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           VFD+M+   +   + +   +++ + +    D    ++++M + GV  +++ Y  LI   C
Sbjct: 138 VFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLC 197

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           +   ++    +  +M  + ++ +   +  LI  +CKKG     L +   M   G+ PD V
Sbjct: 198 RVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAV 257

Query: 272 TYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           TYN++++G CR   ++ A  +  +++  G  P+ VTYTTLIDGYC+  +L+ A+ +++ M
Sbjct: 258 TYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNM 317

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
            A+GV    VTY +++  L K GR  DA R+L EM E  + PDN T   +I+A+C+ GD 
Sbjct: 318 VAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDV 377

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
            + +++   M   G      TY  +++GFCK  +M  A  LL  M++ G SP   +Y+ L
Sbjct: 378 KTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNIL 437

Query: 450 VDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKE 492
           +DG+C       + +L     ++G   D+ VY +++    KK+
Sbjct: 438 LDGHCKHGKVTDIEELKS---AKGTVPDLGVYTSIVGEIVKKK 477



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 93/318 (29%), Positives = 160/318 (50%), Gaps = 18/318 (5%)

Query: 240 TLIALYCKKGMHYEALAVQDRMER----------------EGISPDIVTYNSLIHGFCRE 283
           TL+ L  ++G+  E  +    M R                 G+ P+   +N L+    R 
Sbjct: 70  TLVLLALRRGIRLEPTSCTGLMSRFPTAPEACAFYLQLLDAGLPPEAKLFNVLMRDLVRL 129

Query: 284 GRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTY 341
           G +  A+ +F ++  +G     V++ T+I G CRA DL+ A  L   M+  GV P V TY
Sbjct: 130 GELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTY 189

Query: 342 NSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLE 401
            ++++ LC+ GRI DA  +  +M  + + P+ V    LI+A+CK GD  + +++   M E
Sbjct: 190 GALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRE 249

Query: 402 AGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEA 461
            G+  D  TY A+++G C+A+++  A  ++  M  AG  P   +Y+ L+DGYC +   + 
Sbjct: 250 RGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDM 309

Query: 462 LLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAY 521
            +++    V+ G+ +D   Y ALI    K  +   A+R+   M   G+  D+  YT +  
Sbjct: 310 AMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVID 369

Query: 522 AYWRAGEPKACSDILDDM 539
           A+ R G+ K    +L +M
Sbjct: 370 AFCRKGDVKTGLRLLKEM 387



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 104/384 (27%), Positives = 188/384 (48%), Gaps = 27/384 (7%)

Query: 60  SCAFF-KWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNA 118
           +CAF+ +  ++ +P           ++  L +     SAQN+ +++  R    T    N 
Sbjct: 100 ACAFYLQLLDAGLPPEAKLFN---VLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNT 156

Query: 119 LVKI---HDDPDG---------------NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHN 160
           ++       D DG               + +    L+     +   +D   VF++M    
Sbjct: 157 MISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRG 216

Query: 161 LMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVE 220
           + P+    T+L+++  K    + + +++++M + GV  +   YN +++  C++ D+    
Sbjct: 217 MKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSAS 276

Query: 221 KLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGF 280
            ++ EM    +R D  TY TLI  YCK+     A+ ++  M  EG+  D VTY +LI G 
Sbjct: 277 GIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGL 336

Query: 281 CREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGV 338
            + GR  +A R+  ++   G  P++ TYT +ID +CR  D++  LRL + M  KG  PGV
Sbjct: 337 SKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGV 396

Query: 339 VTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNR 398
           VTYN I+   CK G++++A+ LLN M    ++PD++T N L++ +CK G      ++K+ 
Sbjct: 397 VTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCKHGKVTDIEELKS- 455

Query: 399 MLEAGLMLDQFTYKALIHGFCKAK 422
               G + D   Y +++    K K
Sbjct: 456 --AKGTVPDLGVYTSIVGEIVKKK 477



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 111/234 (47%)

Query: 333 GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
           G+ P    +N ++R L + G +  A  + +EM  + +    V+ NT+I+  C+ GD   A
Sbjct: 111 GLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGA 170

Query: 393 MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
             +  RM EAG+  D +TY ALI G C+   ++ A+ +   M   G  P+   ++ L+D 
Sbjct: 171 ETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDA 230

Query: 453 YCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGD 512
           +C K + E +L+L  E   RG+  D   Y A++   C+   +  A  +   M+  G+  D
Sbjct: 231 HCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPD 290

Query: 513 SVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
           +V YT+L   Y +  E     +I  +M    + +    Y +  +  +K     D
Sbjct: 291 TVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSAD 344



 Score = 42.7 bits (99), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 36/172 (20%), Positives = 64/172 (37%), Gaps = 3/172 (1%)

Query: 400 LEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNE 459
           L  G+ L+  +   L+  F  A E   A      +LDAG  P    ++ L+         
Sbjct: 76  LRRGIRLEPTSCTGLMSRFPTAPE---ACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGEL 132

Query: 460 EALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
            +   + DE  SRG+   V  +  +I   C+   +D A+ L   M   G+  D   Y +L
Sbjct: 133 ASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGAL 192

Query: 520 AYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSH 571
                R G  +    + + M  R +     ++     ++ K  +   +   H
Sbjct: 193 IQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELH 244


>gi|147838532|emb|CAN65388.1| hypothetical protein VITISV_038361 [Vitis vinifera]
          Length = 676

 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 147/513 (28%), Positives = 249/513 (48%), Gaps = 10/513 (1%)

Query: 38  LTSTAIHKVLLNLYNCCHIPSLSC-AFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKS 96
           L +  I +VLL     C   S +  +FF W ++ +   + S Q++  ++H L  +++F  
Sbjct: 143 LGAQEISRVLLR----CQSDSFTALSFFNWVKNDL-GLRPSTQNYCIIVHTLAWSRNFSQ 197

Query: 97  AQNMLEKIA--LRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFD 154
           A   L ++   ++D L    V   L+   +D + +  V   LV  Y  +   ++GL+ F 
Sbjct: 198 AIKFLCELVELVKDDLPGEDVFKNLILCTEDCNWDPVVFDMLVKAYLRMGRVREGLRSFR 257

Query: 155 QMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSS 214
           +M     +P +     LLN L K   TD  W+VY++M + G+  N++ +N+L H  CK  
Sbjct: 258 RMLRVGFVPTVITSNYLLNGLLKLNYTDRCWEVYEEMERFGIAPNLYTFNILTHVLCKDG 317

Query: 215 DVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYN 274
           D  KV K L +ME +    D+ TYNTLI  YC+KG   +A  +   M R G+ PD+V+Y 
Sbjct: 318 DTGKVNKFLEKMEEEGFDPDIVTYNTLINSYCRKGRLDDAFYLYKIMYRRGVVPDLVSYT 377

Query: 275 SLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAK 332
           +L++G C+EGR+REA +LF  +  +G +P+ VTY TLI GYC+   ++E+  L   M   
Sbjct: 378 ALMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWN 437

Query: 333 GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
           G+ P   T   ++    KEG+   A  L+ E+    ++      + LI A C+     +A
Sbjct: 438 GISPDSFTCWVLVEGYGKEGKFLSALNLVVELQRFGVSISQDIYSYLIVALCRENRPFAA 497

Query: 393 MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
             +  RM + G   +   Y  LI  FC+   +  A  L   M+D    P+  +Y  ++  
Sbjct: 498 KNLLERMSQDGHKXELEIYNELIKSFCQCDCIAEALLLKMEMVDKEIKPNLATYRAVJGC 557

Query: 453 YCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGD 512
               +       L+ E V+ G   D+ + RAL   +C++  +D A+ L +       + D
Sbjct: 558 LSRLSRSMEGESLVGEMVASGXLPDLEICRALFYGYCRENDIDKAESLLSFXAKEFQIHD 617

Query: 513 SVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
           +  + +L       G+     +I D M +  L+
Sbjct: 618 TESFNALIRITSAKGDIARSLEIQDMMLKMGLL 650



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 139/538 (25%), Positives = 235/538 (43%), Gaps = 57/538 (10%)

Query: 30  LNPNIASS-LTSTAIHKVLLNLYN-CCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHI 87
           L P  ASS +  T+IH + LNLY     +P L   F       +P + +S  S  + +  
Sbjct: 38  LEPRYASSIMNPTSIHAIKLNLYKYPLSLPVLRFIF-------IPKFPYSSSS--SSLQT 88

Query: 88  LTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQ 147
           L +++                   T S+ N+L  +       +++++ +    +NLK   
Sbjct: 89  LNQSQ-------------------TNSISNSLYHLLPQTQNPNNIVNLIC---SNLKQHN 126

Query: 148 DGLQVFDQMRVHNLMPHLHACTV--LLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNV 205
             L +     V+ L+PHL A  +  +L     D  T + +  + K   LG+  +   Y +
Sbjct: 127 SNLALL-HTEVNALLPHLGAQEISRVLLRCQSDSFTALSFFNWVKN-DLGLRPSTQNYCI 184

Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIAL-YCKKGMHYEALAVQDRMERE 264
           ++H    S +  +  K LCE+  + V+ DL   +    L  C +  ++            
Sbjct: 185 IVHTLAWSRNFSQAIKFLCEL-VELVKDDLPGEDVFKNLILCTEDCNW------------ 231

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEA 322
               D V ++ L+  + R GR+RE  R FR +   G  P  +T   L++G  + N  +  
Sbjct: 232 ----DPVVFDMLVKAYLRMGRVREGLRSFRRMLRVGFVPTVITSNYLLNGLLKLNYTDRC 287

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
             + E M   G+ P + T+N +   LCK+G     N+ L +M E+   PD VT NTLIN+
Sbjct: 288 WEVYEEMERFGIAPNLYTFNILTHVLCKDGDTGKVNKFLEKMEEEGFDPDIVTYNTLINS 347

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           YC+ G    A  +   M   G++ D  +Y AL++G CK   +  A +L   M+  G SP 
Sbjct: 348 YCRKGRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRGLSPD 407

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ L+ GYC +   +    LL + +  G+  D      L+  + K+ K   A  L  
Sbjct: 408 IVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWVLVEGYGKEGKFLSALNLVV 467

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAK 560
            +Q  G+     IY+ L  A  R   P A  ++L+ M +      L+IY     S+ +
Sbjct: 468 ELQRFGVSISQDIYSYLIVALCRENRPFAAKNLLERMSQDGHKXELEIYNELIKSFCQ 525



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 96/381 (25%), Positives = 157/381 (41%), Gaps = 54/381 (14%)

Query: 84  MIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANL 143
           + H+L K+         LEK+    F               DPD  ++  + L+  Y   
Sbjct: 309 LTHVLCKDGDTGKVNKFLEKMEEEGF---------------DPDIVTY--NTLINSYCRK 351

Query: 144 KMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLY 203
               D   ++  M    ++P L + T L+N L K+       +++ +MV  G+  +I  Y
Sbjct: 352 GRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTY 411

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER 263
           N LIH  CK   + +   LL +M +  +  D FT   L+  Y K+G    AL +   ++R
Sbjct: 412 NTLIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWVLVEGYGKEGKFLSALNLVVELQR 471

Query: 264 EGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEE 321
            G+S     Y+ LI   CRE R   A+ L   +   G       Y  LI  +C+ + + E
Sbjct: 472 FGVSISQDIYSYLIVALCRENRPFAAKNLLERMSQDGHKXELEIYNELIKSFCQCDCIAE 531

Query: 322 ALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
           AL L+  M  K + P + TY ++J  L +  R  +   L+ EM      PD   C  L  
Sbjct: 532 ALLLKMEMVDKEIKPNLATYRAVJGCLSRLSRSMEGESLVGEMVASGXLPDLEICRALFY 591

Query: 382 AYCK-----------------------------------IGDTASAMKVKNRMLEAGLML 406
            YC+                                    GD A ++++++ ML+ GL+ 
Sbjct: 592 GYCRENDIDKAESLLSFXAKEFQIHDTESFNALIRITSAKGDIARSLEIQDMMLKMGLLP 651

Query: 407 DQFTYKALIHGFCKAKEMDIA 427
           +  T K +I G  KA+ +D A
Sbjct: 652 NPLTCKYVIDGLWKARRVDSA 672



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/208 (23%), Positives = 89/208 (42%), Gaps = 7/208 (3%)

Query: 372 DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
           D V  + L+ AY ++G     ++   RML  G +    T   L++G  K    D   E+ 
Sbjct: 232 DPVVFDMLVKAYLRMGRVREGLRSFRRMLRVGFVPTVITSNYLLNGLLKLNYTDRCWEVY 291

Query: 432 FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
             M   G +P+  +++ L    C   +   + K L++    G   D+  Y  LI  +C+K
Sbjct: 292 EEMERFGIAPNLYTFNILTHVLCKDGDTGKVNKFLEKMEEEGFDPDIVTYNTLINSYCRK 351

Query: 492 EKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIY 551
            ++D A  L+ +M   G++ D V YT+L     + G  +    +   M  R L   +  Y
Sbjct: 352 GRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTY 411

Query: 552 RSFSASYAKDNEIL-------DLFWSHV 572
            +    Y K+ ++        D+ W+ +
Sbjct: 412 NTLIHGYCKEGKMQESRSLLHDMIWNGI 439


>gi|359473479|ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g13630-like [Vitis
           vinifera]
          Length = 829

 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 135/456 (29%), Positives = 225/456 (49%), Gaps = 39/456 (8%)

Query: 129 NSHVLSWLVIFYANLKM--TQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWK 186
           N  ++++ ++   + +M   ++  ++ ++M    L   +   TVLL+SL K    D    
Sbjct: 372 NPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVI 431

Query: 187 VYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFK----------------- 229
           +  +M  +G+  ++  Y+VLIH  CK   V++  +L  EM  K                 
Sbjct: 432 LLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLF 491

Query: 230 ------------------DVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
                             DV  ++  YN +I  Y K G   EA+    ++  +GISP IV
Sbjct: 492 EKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIV 551

Query: 272 TYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           T+NSLI+GFC++G++ EA +L   IK  G  P  VTYTTL++GYC   D+     +   M
Sbjct: 552 TFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEM 611

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
            AK + P  +TY  +++ LCKEGR+ ++ +LL  M  + + PD +T NT+I ++CK  D 
Sbjct: 612 EAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDL 671

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
             A ++ N+ML+  L     TY  LI+G C    +  A  LL  + D     +  +Y+ +
Sbjct: 672 QKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTI 731

Query: 450 VDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGI 509
           +  +C K + +  L    + V RG  V +  Y A+I R CK+  +  A+  F +M  +GI
Sbjct: 732 IKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGI 791

Query: 510 LGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
             D  I   +  A+ R+G+P +  +I   M +  L+
Sbjct: 792 PPDQDICLVMLNAFHRSGDPNSVFEIFAMMIKCGLL 827



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 147/550 (26%), Positives = 251/550 (45%), Gaps = 43/550 (7%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFL-STPSVLNALVKIHDDPDGNSH 131
            ++HS  S + + H++ +    K  + +L ++   +   S PS+   L     D D N+ 
Sbjct: 110 GFRHSRVSWFIVSHVVARKGQSKELRRVLNQMVEEEGSGSAPSLCELLCNSFRDWDLNNV 169

Query: 132 VLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKM 191
           V   L   Y+  +M  D L V  +M+V NL   +     LL +L   R TD++W VY ++
Sbjct: 170 VWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNL---RHTDIMWDVYNEI 226

Query: 192 VQLGVVAN-----------------------------------IHLYNVLIHACCKSSDV 216
              GV  N                                   +  +N L+   CK   V
Sbjct: 227 KASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSV 286

Query: 217 DKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSL 276
           D  +   C M    +  D+++YN L+   C  G   EAL   + ME  G+ PDIVTYN L
Sbjct: 287 DVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNIL 346

Query: 277 IHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGV 334
            +GF   G +  A ++ +   + G  P+ VTYT LI G+C+  ++EE+ +L+E M ++G+
Sbjct: 347 ANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGL 406

Query: 335 YPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMK 394
              +VTY  +L  LCK GRI +A  LL+EM    + PD +T + LI+  CK G    A++
Sbjct: 407 KLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIE 466

Query: 395 VKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYC 454
           +   M    +  + F   A+I G  +   +  A+     +  +  +     Y+ ++DGY 
Sbjct: 467 LYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYA 526

Query: 455 NKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSV 514
              N    ++   + + +G+   +  + +LI  FCKK K+  A +L + ++ +G++  SV
Sbjct: 527 KLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSV 586

Query: 515 IYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD--LFWSHV 572
            YT+L   Y   G+  +  D+L +M  + +  T   Y        K+  + +      ++
Sbjct: 587 TYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYM 646

Query: 573 VDRGLMSKHI 582
             RGL    I
Sbjct: 647 YARGLFPDQI 656



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 116/439 (26%), Positives = 212/439 (48%), Gaps = 4/439 (0%)

Query: 143 LKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHL 202
           L +     +V  +M ++ L P L   T+L+    +    +  +K+ +KM+  G+  +I  
Sbjct: 353 LGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVT 412

Query: 203 YNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRME 262
           Y VL+ + CKS  +D+   LL EME   ++ DL TY+ LI   CK+G   EA+ + + M 
Sbjct: 413 YTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMC 472

Query: 263 REGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGA--TPNHVTYTTLIDGYCRANDLE 320
            + I P+    +++I G   +G + EA+  F  +  +      + Y  +IDGY +  ++ 
Sbjct: 473 SKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIG 532

Query: 321 EALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLI 380
           EA+R  + +  KG+ P +VT+NS++   CK+G++ +A +LL+ +    + P +VT  TL+
Sbjct: 533 EAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLM 592

Query: 381 NAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFS 440
           N YC+ GD  S   + + M    +   Q TY  ++ G CK   +  + +LL  M   G  
Sbjct: 593 NGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLF 652

Query: 441 PSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRL 500
           P   +Y+ ++  +C  ++ +   +L ++ +   L      Y  LI   C    +  A RL
Sbjct: 653 PDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRL 712

Query: 501 FNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAK 560
              +Q   I    V YT++  A+   G+ +        M  R   ++++ Y +      K
Sbjct: 713 LVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCK 772

Query: 561 DNEILD--LFWSHVVDRGL 577
            N I D   F+  ++  G+
Sbjct: 773 RNLITDAKFFFCMMLTHGI 791



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 104/435 (23%), Positives = 207/435 (47%), Gaps = 37/435 (8%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           QD +    +       P + +   L++   K    D+    +  M++ G++ +++ YN+L
Sbjct: 252 QDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNIL 311

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           +H  C +  +++  +   +ME   V  D+ TYN L   +   G+   A  V  RM   G+
Sbjct: 312 LHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGL 371

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
           +PD+VTY  LI G C+ G + E+ +L   +  +G   + VTYT L+   C++  ++EA+ 
Sbjct: 372 NPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVI 431

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTC-------- 376
           L   M   G+ P ++TY+ ++  LCK G + +A  L  EM  K+I P++  C        
Sbjct: 432 LLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLF 491

Query: 377 ---------------------------NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQF 409
                                      N +I+ Y K+G+   A++   +++E G+     
Sbjct: 492 EKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIV 551

Query: 410 TYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEF 469
           T+ +LI+GFCK  ++  A +LL  +   G  P+  +Y+ L++GYC + +  ++  +L E 
Sbjct: 552 TFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEM 611

Query: 470 VSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEP 529
            ++ +      Y  +++  CK+ ++  + +L   M   G+  D + Y ++  ++ +A + 
Sbjct: 612 EAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDL 671

Query: 530 KACSDILDDMYRRRL 544
           +    + + M +  L
Sbjct: 672 QKAFQLHNQMLQHSL 686



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 40/192 (20%), Positives = 82/192 (42%), Gaps = 2/192 (1%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
            + +Q+   M    L P       ++ S  K       ++++ +M+Q  +  +   YNVL
Sbjct: 637 HESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVL 696

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           I+  C   ++   ++LL  ++ + +R     Y T+I  +C KG    AL    +M   G 
Sbjct: 697 INGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGF 756

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLF--RDIKGATPNHVTYTTLIDGYCRANDLEEALR 324
              I  Y+++I+  C+   + +A+  F      G  P+      +++ + R+ D      
Sbjct: 757 EVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFE 816

Query: 325 LREVMAAKGVYP 336
           +  +M   G+ P
Sbjct: 817 IFAMMIKCGLLP 828


>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
          Length = 948

 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 147/505 (29%), Positives = 236/505 (46%), Gaps = 55/505 (10%)

Query: 79  QSHWTMIHILTKNKHFKSAQNMLEKIAL-----RDFLSTPSVLNALVKIHDDPDGNSHVL 133
           Q +  +IH+LT  K +  A+ ++  +       R      SV N L ++ +      +V 
Sbjct: 71  QLYSAIIHVLTGAKLYAKARCLMRDLIQCLQNSRRSRICCSVFNVLSRL-ESSKFTPNVF 129

Query: 134 SWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQ 193
             L+I ++ + + ++ L V+ +M V   +P + AC ++L+ L K    D +WKVY  MV 
Sbjct: 130 GVLIIAFSEMGLVEEALWVYYKMDV---LPAMQACNMVLDGLVKKGRFDTMWKVYGDMVA 186

Query: 194 LGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYE 253
            G   N+  Y  LI  CC+  D  K  +L  EM  K +   +  Y  LI   C +    E
Sbjct: 187 RGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISE 246

Query: 254 ALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK---------------- 297
           A ++   M   G+ P++ TYN+++ G+C+   +++A  L++++                 
Sbjct: 247 AESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILID 306

Query: 298 ---------------------GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYP 336
                                G  PN   Y  LIDGYC+A +L EAL L   +    + P
Sbjct: 307 GLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILP 366

Query: 337 GVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVK 396
            V TY+ +++ LC   R+ +A+ LL EM +K   P+ VT NTLI+ YCK G+   A++V 
Sbjct: 367 DVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVC 426

Query: 397 NRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNK 456
           ++M E G+  +  T+  LI G+CKA +M+ A  L   M+  G  P   +Y+ L+DG+   
Sbjct: 427 SQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKD 486

Query: 457 NNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILG----- 511
            N +   +L  E    GL  +V     LI   CK  ++  A +LF    G    G     
Sbjct: 487 GNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNE 546

Query: 512 -DSVIYT--SLAYAYWRA-GEPKAC 532
            D  +Y   SLA + +R   EP  C
Sbjct: 547 LDRSLYQMCSLALSLFRGISEPCIC 571



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 105/345 (30%), Positives = 171/345 (49%), Gaps = 7/345 (2%)

Query: 238 YNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI- 296
           +  LI  + + G+  EAL V  +M+   + P +   N ++ G  ++GR     +++ D+ 
Sbjct: 129 FGVLIIAFSEMGLVEEALWVYYKMD---VLPAMQACNMVLDGLVKKGRFDTMWKVYGDMV 185

Query: 297 -KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIR 355
            +GA+PN VTY TLIDG CR  D  +A RL + M  K ++P VV Y  ++R LC E RI 
Sbjct: 186 ARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRIS 245

Query: 356 DANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALI 415
           +A  +   M    + P+  T NT+++ YCKI     A+++   ML  GL+ +  T+  LI
Sbjct: 246 EAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILI 305

Query: 416 HGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLC 475
            G CK  EM  A++ L  M   G  P+   Y+ L+DGYC   N    L L  E     + 
Sbjct: 306 DGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEIL 365

Query: 476 VDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDI 535
            DV  Y  LI+  C  ++++ A  L   M+  G L ++V Y +L   Y + G  +   ++
Sbjct: 366 PDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEV 425

Query: 536 LDDMYRRRLMITLKIYRSFSASYAKDN--EILDLFWSHVVDRGLM 578
              M  + +   +  + +    Y K    E     ++ +V +GL+
Sbjct: 426 CSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLL 470



 Score = 45.1 bits (105), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 56/130 (43%), Gaps = 2/130 (1%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALR 324
           G  P I    SLI  +   G + +A  +F +I   + N +++T++I  Y       +AL+
Sbjct: 661 GFEPIIFLQTSLISMYSATGNVADAHNMFDEI--PSKNLISWTSVISAYVDNQRPNKALQ 718

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           L   M    V P +VT    L      G +     +   +  + +  D    N+LIN Y 
Sbjct: 719 LFRQMQMDDVQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLINMYS 778

Query: 385 KIGDTASAMK 394
           K G+  +A +
Sbjct: 779 KCGEIGTARR 788



 Score = 44.7 bits (104), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 58/297 (19%), Positives = 114/297 (38%), Gaps = 52/297 (17%)

Query: 83  TMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYAN 142
           ++I + +   +   A NM ++I  ++ +S  SV++A                     Y +
Sbjct: 671 SLISMYSATGNVADAHNMFDEIPSKNLISWTSVISA---------------------YVD 709

Query: 143 LKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHL 202
            +     LQ+F QM++ ++ P +   TV L++ A     DM   ++  +   G+  ++ L
Sbjct: 710 NQRPNKALQLFRQMQMDDVQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCL 769

Query: 203 YNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRME 262
            N LI+   K  ++    +      F  V  +  T+  ++      G+  E       M+
Sbjct: 770 NNSLINMYSKCGEIGTARR------FSLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMK 823

Query: 263 RE-GISPDIVTYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCR------ 315
            +  + P I  +  ++   CR G + EA      +    PN V + TL+ G C       
Sbjct: 824 EDYSLRPRISHFGCMVDLLCRAGLLTEAYEFILKMP-VRPNAVVWRTLL-GACSLQGMWD 881

Query: 316 ----------------ANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRD 356
                            + +E  + ++E +AA   +P +     IL  L +  R  D
Sbjct: 882 KKMLVRNQIKQRRDPGCSSIEVGIDIKEFVAADDQHPCMPQIYEILDHLTRTMRASD 938



 Score = 41.6 bits (96), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 44/211 (20%), Positives = 84/211 (39%), Gaps = 22/211 (10%)

Query: 50  LYNC-----CHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKI 104
           +YNC     C   +LS A    +E         + ++  +I  L      + A  +L+++
Sbjct: 335 VYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEM 394

Query: 105 ALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPH 164
             + FL      N L+      DG           Y      +  ++V  QM    + P+
Sbjct: 395 KKKGFLPNAVTYNTLI------DG-----------YCKEGNMEKAIEVCSQMTEKGIEPN 437

Query: 165 LHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLC 224
           +   + L++   K    +    +Y +MV  G++ ++  Y  LI    K  +  +  +L  
Sbjct: 438 IITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHK 497

Query: 225 EMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
           EM+   +  ++FT + LI   CK G   +A+
Sbjct: 498 EMQEAGLHPNVFTLSCLIDGLCKDGRISDAI 528


>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
          Length = 718

 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 135/479 (28%), Positives = 236/479 (49%), Gaps = 17/479 (3%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
            +L  ++ +   P  NS     L+  Y         L++ D+M   NL+P   +   ++N
Sbjct: 101 EILKGMITLGCKP--NSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMIN 158

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
            L   +   +  K+ +KM   G+  N+ +Y+ LI        +++  +LL  M    V  
Sbjct: 159 GLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAP 218

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           D+F YN +I+   K G   EA      ++  G+ PD VT+ + I G+ + G+M EA + F
Sbjct: 219 DIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYF 278

Query: 294 RDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
            ++   G  PN+  YT LI+G+ +A +L EAL +   + A GV P V T ++ +  L K 
Sbjct: 279 DEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKN 338

Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
           GR+++A ++ +E+ EK + PD  T ++LI+ +CK G+   A ++ + M   G+  + F Y
Sbjct: 339 GRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIY 398

Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
            AL+ G CK+ ++  A++L  GM + G  P   +YS ++DGYC   N      L  E  S
Sbjct: 399 NALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPS 458

Query: 472 RGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKA 531
           +G+     VY AL+   CK+  ++ A  LF  M   G    ++ + +L   Y ++ + + 
Sbjct: 459 KGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKG-FATTLSFNTLIDGYCKSCKIQE 517

Query: 532 CSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKEMQLRN 590
            S +  +M  +++M     Y +          ++D  W     +   +  +FKEMQ RN
Sbjct: 518 ASQLFQEMIAKQIMPDHVTYTT----------VID--WHCKAGKMEEANLLFKEMQERN 564



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 147/544 (27%), Positives = 260/544 (47%), Gaps = 43/544 (7%)

Query: 24  GHWAKLLNPNIASSLTSTAI-HKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHW 82
           G   +LL+     +L  +A+ +  ++N    CH   LS A     +      K ++  + 
Sbjct: 132 GRALELLDEMEKRNLVPSAVSYGAMIN--GLCHCKDLSLANKLLEKMTFSGLKPNVVVYS 189

Query: 83  TMIHILTKNKHFKSAQNMLEKIALR----DFLSTPSVLNALVKIHDDPDGNSHVL----- 133
           T+I         + A+ +L+ ++      D     ++++ L K     + ++++L     
Sbjct: 190 TLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGR 249

Query: 134 ---------SWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMV 184
                       ++ Y+      +  + FD+M  H LMP+    TVL+N   K       
Sbjct: 250 GLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEA 309

Query: 185 WKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIAL 244
             +++ +  LGV+ ++   +  IH   K+  V +  K+  E++ K +  D+FTY++LI+ 
Sbjct: 310 LSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISG 369

Query: 245 YCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPN 302
           +CK+G   +A  + D M  +GI+P+I  YN+L+ G C+ G ++ AR+LF  +  KG  P+
Sbjct: 370 FCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPD 429

Query: 303 HVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLN 362
            VTY+T+IDGYC++ ++ EA  L   M +KGV P    YN+++   CKEG +  A  L  
Sbjct: 430 SVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFR 489

Query: 363 EMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAK 422
           EM +K  A   ++ NTLI+ YCK      A ++   M+   +M D  TY  +I   CKA 
Sbjct: 490 EMLQKGFAT-TLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAG 548

Query: 423 EMDIAKELLFG------------------MLDAGFSPSYCSYSWLVDGYCNKNNEEALLK 464
           +M+ A  LLF                   M+  G  P   +Y  ++  +C ++N     K
Sbjct: 549 KMEEAN-LLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFK 607

Query: 465 LLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYW 524
           L DE V +G+    +++  LI   CK+E +  A +L + M   G+       ++L  ++ 
Sbjct: 608 LRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFH 667

Query: 525 RAGE 528
            AG+
Sbjct: 668 EAGK 671



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 128/442 (28%), Positives = 207/442 (46%), Gaps = 2/442 (0%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N++  + +       K   +    F++M+   L P  +AC+ L++   ++   D V ++ 
Sbjct: 9   NTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIK 68

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
             MV  G+  N+  YNVLIH  CK   ++K  ++L  M     + +  T+  LI  YC++
Sbjct: 69  DVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCRE 128

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTY 306
                AL + D ME+  + P  V+Y ++I+G C    +  A +L   +   G  PN V Y
Sbjct: 129 HNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVY 188

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
           +TLI GY     +EEA RL + M+  GV P +  YN+I+  L K G++ +A+  L E+  
Sbjct: 189 STLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQG 248

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
           + + PD VT    I  Y K G    A K  + ML+ GLM +   Y  LI+G  KA  +  
Sbjct: 249 RGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLME 308

Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
           A  +   +   G  P   + S  + G       +  LK+  E   +GL  DV  Y +LI 
Sbjct: 309 ALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLIS 368

Query: 487 RFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMI 546
            FCK+ +V+ A  L + M   GI  +  IY +L     ++G+ +    + D M  + L  
Sbjct: 369 GFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEP 428

Query: 547 TLKIYRSFSASYAKDNEILDLF 568
               Y +    Y K   + + F
Sbjct: 429 DSVTYSTMIDGYCKSENVAEAF 450



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 124/430 (28%), Positives = 210/430 (48%), Gaps = 35/430 (8%)

Query: 76  HSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSW 135
           H L  +  +  +L  N HFK A N++E +++   L    VL         PD    V + 
Sbjct: 284 HGLMPNNPLYTVLI-NGHFK-AGNLMEALSIFRHLHALGVL---------PD----VQTC 328

Query: 136 LVIFYANLK--MTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQ 193
               +  LK    Q+ L+VF +++   L+P +   + L++   K    +  ++++ +M  
Sbjct: 329 SAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCL 388

Query: 194 LGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYE 253
            G+  NI +YN L+   CKS D+ +  KL   M  K +  D  TY+T+I  YCK     E
Sbjct: 389 KGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAE 448

Query: 254 ALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD-IKGATPNHVTYTTLIDG 312
           A ++   M  +G+ P    YN+L+HG C+EG M +A  LFR+ ++      +++ TLIDG
Sbjct: 449 AFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDG 508

Query: 313 YCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE------ 366
           YC++  ++EA +L + M AK + P  VTY +++   CK G++ +AN L  EM E      
Sbjct: 509 YCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVD 568

Query: 367 -----------KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALI 415
                      K + PD VT   +I A+CK  +   A K+++ ++  G++     +  LI
Sbjct: 569 TVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLI 628

Query: 416 HGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLC 475
              CK +++  A +LL  M + G  PS  + S LV  +      +   ++ +   S GL 
Sbjct: 629 TALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLV 688

Query: 476 VDVSVYRALI 485
            D +    L+
Sbjct: 689 PDTTTLIDLV 698



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 140/547 (25%), Positives = 241/547 (44%), Gaps = 76/547 (13%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHV 132
           N   S  S+  MI+ L   K    A  +LEK+        P+V+               V
Sbjct: 145 NLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGL--KPNVV---------------V 187

Query: 133 LSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMV 192
            S L++ YA+    ++  ++ D M    + P +     +++ L+K    +       ++ 
Sbjct: 188 YSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQ 247

Query: 193 QLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHY 252
             G+  +   +   I    K+  + +  K   EM    +  +   Y  LI  + K G   
Sbjct: 248 GRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLM 307

Query: 253 EALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLI 310
           EAL++   +   G+ PD+ T ++ IHG  + GR++EA ++F ++K  G  P+  TY++LI
Sbjct: 308 EALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLI 367

Query: 311 DGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIA 370
            G+C+  ++E+A  L + M  KG+ P +  YN+++  LCK G I+ A +L + M EK + 
Sbjct: 368 SGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLE 427

Query: 371 PDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL 430
           PD+VT +T+I+ YCK  + A A  + + M   G+    F Y AL+HG CK  +M+ A  L
Sbjct: 428 PDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNL 487

Query: 431 LFGMLDAGFSPSYCSYSWLVDGYCNK---------------------------------- 456
              ML  GF+ +  S++ L+DGYC                                    
Sbjct: 488 FREMLQKGFATTL-SFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCK 546

Query: 457 --NNEEA----------------LLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQ 498
               EEA                +  L ++ V++G+  D   Y  +I   CK++ +  A 
Sbjct: 547 AGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAF 606

Query: 499 RLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITL----KIYRSF 554
           +L + + G G+L    I+  L  A  +  +    S +LD+M    L  +L     + RSF
Sbjct: 607 KLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSF 666

Query: 555 SASYAKD 561
             +   D
Sbjct: 667 HEAGKMD 673



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 112/411 (27%), Positives = 192/411 (46%), Gaps = 2/411 (0%)

Query: 156 MRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSD 215
           M    L+P+ +  T++   L + +  +     +++M + G+  + +  + LI    +  D
Sbjct: 1   MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60

Query: 216 VDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNS 275
           +D+V ++   M    +  +L TYN LI   CK G   +A  +   M   G  P+  T+  
Sbjct: 61  IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 120

Query: 276 LIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKG 333
           LI G+CRE  M  A  L  ++  +   P+ V+Y  +I+G C   DL  A +L E M   G
Sbjct: 121 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 180

Query: 334 VYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAM 393
           + P VV Y++++     EGRI +A RLL+ M+   +APD    N +I+   K G    A 
Sbjct: 181 LKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAS 240

Query: 394 KVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGY 453
                +   GL  D  T+ A I G+ K  +M  A +    MLD G  P+   Y+ L++G+
Sbjct: 241 TYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGH 300

Query: 454 CNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDS 513
               N    L +     + G+  DV    A I    K  +V  A ++F+ ++  G++ D 
Sbjct: 301 FKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDV 360

Query: 514 VIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
             Y+SL   + + GE +   ++ D+M  + +   + IY +      K  +I
Sbjct: 361 FTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDI 411



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 88/308 (28%), Positives = 156/308 (50%), Gaps = 2/308 (0%)

Query: 261 MEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRAND 318
           M  +G+ P+  TY  +  G CR  RM EA+  F +++  G  P++   + LIDG+ R  D
Sbjct: 1   MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60

Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT 378
           ++E LR+++VM + G+   ++TYN ++  LCK G++  A  +L  M      P++ T   
Sbjct: 61  IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 120

Query: 379 LINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAG 438
           LI  YC+  +   A+++ + M +  L+    +Y A+I+G C  K++ +A +LL  M  +G
Sbjct: 121 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 180

Query: 439 FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQ 498
             P+   YS L+ GY ++   E   +LLD     G+  D+  Y A+I    K  K++ A 
Sbjct: 181 LKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAS 240

Query: 499 RLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASY 558
                +QG G+  D+V + +    Y + G+    +   D+M    LM    +Y      +
Sbjct: 241 TYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGH 300

Query: 559 AKDNEILD 566
            K   +++
Sbjct: 301 FKAGNLME 308


>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g74580-like [Cucumis
           sativus]
          Length = 877

 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 142/512 (27%), Positives = 246/512 (48%), Gaps = 29/512 (5%)

Query: 77  SLQSHWTMIHILTKNKHFKSAQNMLEK--------------IALRDFLSTPSVLNALVKI 122
           S+QS+  +++IL +  +F  A  +  +              I ++ F  T     AL  +
Sbjct: 110 SVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLL 169

Query: 123 HDDPDGNS--HVLSWLVIFYANLK--MTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKD 178
           ++ P      + +S+  +     K     +   +FD+M    + P +     L++ L K 
Sbjct: 170 NNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKK 229

Query: 179 RLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTY 238
                  K++ K+++ GV  N+  +N+ I   C+   +D+  +LL  +  + +  D+ +Y
Sbjct: 230 GNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISY 289

Query: 239 NTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--I 296
           NTLI  +CK     EA     +M   G+ P+  TYN++I+GFC+ G M+ A ++ RD   
Sbjct: 290 NTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMF 349

Query: 297 KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRD 356
           KG  P+  TY++LI+G C   D+  A+ +      KG    ++ YN++++ L K+G +  
Sbjct: 350 KGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQ 409

Query: 357 ANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIH 416
           A +L+ +M E   +PD  T N ++N  CK+G  + A  + N  +  G + D FT+  LI 
Sbjct: 410 ALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLID 469

Query: 417 GFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCV 476
           G+CK + MD A E+L  ML  G +P   +Y+ L++G C     + ++      + +G   
Sbjct: 470 GYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTP 529

Query: 477 DVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDIL 536
           ++  Y  LI  FCK  KV  A  LF  M+  G+  D V   +L       GE       L
Sbjct: 530 NIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGE-------L 582

Query: 537 DDMYRRRLMITLKIYRSFSASYAKDNEILDLF 568
           D  Y   L +T++    FS S A  N +++ F
Sbjct: 583 DKAY--ELFVTIEKEYKFSYSTAIFNIMINAF 612



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 100/396 (25%), Positives = 185/396 (46%), Gaps = 3/396 (0%)

Query: 122 IHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLT 181
           ++   + N    + ++  +    M Q+  ++         +P     + L+N L  D   
Sbjct: 313 VNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDM 372

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
           +    V+ + ++ G   +I LYN L+    K   V +  +L+ +M       D++TYN +
Sbjct: 373 NRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLV 432

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGA 299
           +   CK G   +A  + +    +G  PDI T+N+LI G+C++  M +A  +   +   G 
Sbjct: 433 VNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGI 492

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
           TP+ +TY TL++G C+A  L+  +   + M  KG  P ++TYN ++   CK+ ++ +A  
Sbjct: 493 TPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAME 552

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRM-LEAGLMLDQFTYKALIHGF 418
           L  EM  + + PD VT  TLI   C  G+   A ++   +  E         +  +I+ F
Sbjct: 553 LFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAF 612

Query: 419 CKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDV 478
           C    + +A++L   M  +  +P   +Y  ++D YC   N +     L E +S+GL    
Sbjct: 613 CXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSF 672

Query: 479 SVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSV 514
           +    ++   C   ++  A  + NLM  NGI+ + V
Sbjct: 673 TTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVPEEV 708



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 101/414 (24%), Positives = 194/414 (46%), Gaps = 20/414 (4%)

Query: 137 VIFYANLKMTQDGLQVFDQMRVHNLMPH-LHACTVLLNSLA--------KDRLTDMVWKV 187
           VI Y N  +  + L++F+Q++  +   H L     ++  L         +D L +M   V
Sbjct: 13  VIRYQNDPL--NALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRKNV 70

Query: 188 YKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCK 247
             KM++   +  +  Y        +   V +   +   M+F D    + +YN ++ +  +
Sbjct: 71  DSKMLEGVYIGIMRDYG-------RKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVE 123

Query: 248 KGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVT 305
            G   +A  V  RM+  GI PD+ T+   +  FC  GR   A RL  ++  +G   N V+
Sbjct: 124 YGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVS 183

Query: 306 YTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMN 365
           Y  +I G+ + N   EA  L + M  +G+ P ++T+N ++  LCK+G ++++ +L +++ 
Sbjct: 184 YCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVM 243

Query: 366 EKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMD 425
           ++ + P+  T N  I   C+ G    A ++   ++  GL  D  +Y  LI GFCK  ++ 
Sbjct: 244 KRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLV 303

Query: 426 IAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
            A+  L  M+++G  P+  +Y+ +++G+C     +   K+L + + +G   D   Y +LI
Sbjct: 304 EAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLI 363

Query: 486 RRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
              C    ++ A  +F      G     ++Y +L     + G       ++ DM
Sbjct: 364 NGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDM 417



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 89/375 (23%), Positives = 169/375 (45%), Gaps = 5/375 (1%)

Query: 195 GVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLF--TYNTLIALYCKKGMHY 252
           G    +  Y  +I         + +E +L EM  K+V + +    Y  ++  Y +KG   
Sbjct: 35  GFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMR-KNVDSKMLEGVYIGIMRDYGRKGKVQ 93

Query: 253 EALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLI 310
           EA+ V +RM+     P + +YN++++     G   +A +++  +K  G  P+  T+T  +
Sbjct: 94  EAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRM 153

Query: 311 DGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIA 370
             +C       ALRL   M  +G     V+Y +++    KE    +A  L +EM ++ I 
Sbjct: 154 KSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGIC 213

Query: 371 PDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL 430
           PD +T N LI+  CK G+   + K+ +++++ G+  + FT+   I G C+   +D A  L
Sbjct: 214 PDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARL 273

Query: 431 LFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCK 490
           L  ++  G +P   SY+ L+ G+C  +        L + V+ G+  +   Y  +I  FCK
Sbjct: 274 LESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCK 333

Query: 491 KEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKI 550
              +  A ++       G + D   Y+SL       G+      +  +   +    ++ +
Sbjct: 334 AGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIIL 393

Query: 551 YRSFSASYAKDNEIL 565
           Y +     +K   +L
Sbjct: 394 YNTLVKGLSKQGLVL 408



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 88/342 (25%), Positives = 154/342 (45%), Gaps = 21/342 (6%)

Query: 54  CHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKN----KHFKSAQNMLEKIALRDF 109
           C+   ++ A   + E+    +KHS+  + T++  L+K     +  +  ++M+E     D 
Sbjct: 367 CNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDI 426

Query: 110 LSTPSVLNALVKIHDDPDGNS--------------HVLSWLVIFYANLKMTQDGLQVFDQ 155
            +   V+N L K+    D N                  + L+  Y   +     +++ D 
Sbjct: 427 WTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDT 486

Query: 156 MRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSD 215
           M  H + P +     LLN L K R  D V   +K M++ G   NI  YN+LI + CK   
Sbjct: 487 MLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRK 546

Query: 216 VDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMERE-GISPDIVTYN 274
           V +  +L  EM+ + +  D+ T  TLI   C  G   +A  +   +E+E   S     +N
Sbjct: 547 VSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFN 606

Query: 275 SLIHGFCREGRMREARRLFRDIKGA--TPNHVTYTTLIDGYCRANDLEEALRLREVMAAK 332
            +I+ FC +  +  A +LF  + G+   P++ TY  +ID YC+  +++ A        +K
Sbjct: 607 IMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISK 666

Query: 333 GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNV 374
           G+ P   T   +L  LC   R+ +A  ++N M +  I P+ V
Sbjct: 667 GLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVPEEV 708



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/235 (22%), Positives = 104/235 (44%), Gaps = 6/235 (2%)

Query: 332 KGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTAS 391
           +GVY G      I+R   ++G++++A  +   M+     P   + N ++N   + G  + 
Sbjct: 76  EGVYIG------IMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQ 129

Query: 392 AMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVD 451
           A KV  RM + G+  D +T+   +  FC       A  LL  M   G   +  SY  ++ 
Sbjct: 130 AHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVIS 189

Query: 452 GYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILG 511
           G+  +N +     L DE + +G+C D+  +  LI   CKK  V  +++LF+ +   G+  
Sbjct: 190 GFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCP 249

Query: 512 DSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
           +   +        R G     + +L+ +    L   +  Y +    + K +++++
Sbjct: 250 NLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVE 304


>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
 gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
          Length = 1031

 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 139/518 (26%), Positives = 233/518 (44%), Gaps = 32/518 (6%)

Query: 54  CHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTP 113
           C +  +  AF    ++ V  +K  +  +  +     K    K A  +   I   D ++  
Sbjct: 171 CQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIPSPDAIA-- 228

Query: 114 SVLNALVKIH---DDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTV 170
              NA++  H   +D DG                     L+   +M    + P +    +
Sbjct: 229 --YNAIIHGHCRKNDCDG--------------------ALEFLKEMNERKVAPDVFTYNI 266

Query: 171 LLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKD 230
           L++ L K   TD   ++  +MV  GV  +   +N ++   CK+   ++   LL  M  ++
Sbjct: 267 LIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERN 326

Query: 231 VRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREAR 290
            R    TYNTLI+  CK+     A  + D     G  PD+VTY+ L  G C+ GR+ EA 
Sbjct: 327 CRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAF 386

Query: 291 RLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
            L +++  KG TPN VTY TLIDG C+A+  E+A  L E + + G  P VVTY  I+  L
Sbjct: 387 ELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGL 446

Query: 349 CKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ 408
           CKEGR+  A +++  M ++   P  +T   L+   C+ G    A  +   M+      D 
Sbjct: 447 CKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADA 506

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
             Y +L++G+CK+     A++++ G+     +P    Y+ L+DGYC +   + +  + ++
Sbjct: 507 LAYVSLVNGYCKSSRTKEAQKVVDGIRG---TPYIDVYNALMDGYCKEGRLDEIPNVFED 563

Query: 469 FVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
              RG   ++  Y  ++   CK  KVD A      M   G + D V Y  +    ++A +
Sbjct: 564 MACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASK 623

Query: 529 PKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
           PK    +LD M +  +      Y +  A + K+    D
Sbjct: 624 PKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDD 661



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 145/547 (26%), Positives = 245/547 (44%), Gaps = 42/547 (7%)

Query: 25  HWAKLLNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTM 84
            W   L P + S        +VL  L +    P  +  FF WA      +KHS  +    
Sbjct: 86  QWRGTLQPAVVS--------RVLQRLKD----PQTAIVFFVWAGDR--GFKHSTFTRNCF 131

Query: 85  IHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLK 144
           +  L +N        M E++    +                PD  S+    ++     + 
Sbjct: 132 LQTLLENGSSDRIPAMFERMLDAGYA---------------PD--SYTYHLVIKSLCQMN 174

Query: 145 MTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAK-DRLTDMVWKVYKKMVQLGVVANIHLY 203
                  + D+ +V    P +   T+L  +  K  RL D + ++++ +     +A    Y
Sbjct: 175 QIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDAL-EIFRNIPSPDAIA----Y 229

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER 263
           N +IH  C+ +D D   + L EM  + V  D+FTYN LI   CK     +A  +   M  
Sbjct: 230 NAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVD 289

Query: 264 EGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEE 321
            G++PD VT+NS++ G C+ G+   A  L   +  +   P+  TY TLI G C+  +++ 
Sbjct: 290 RGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDR 349

Query: 322 ALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
           A  L +   + G  P VVTY+ +   LCK GRI +A  L+ EM+ K   P+ VT NTLI+
Sbjct: 350 AKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLID 409

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
             CK   T  A ++   ++ +G + D  TY  ++ G CK   +D A +++ GML  G +P
Sbjct: 410 GLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTP 469

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
           S  +Y+ L++G C     +    +  E VS+    D   Y +L+  +CK  +   AQ++ 
Sbjct: 470 SVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVV 529

Query: 502 NLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKD 561
           + ++G   +    +Y +L   Y + G      ++ +DM  R  +  +K Y        K 
Sbjct: 530 DGIRGTPYID---VYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKH 586

Query: 562 NEILDLF 568
            ++ + F
Sbjct: 587 GKVDEAF 593



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 139/443 (31%), Positives = 209/443 (47%), Gaps = 32/443 (7%)

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           LV  Y     T++  +V D +R     P++     L++   K+   D +  V++ M   G
Sbjct: 512 LVNGYCKSSRTKEAQKVVDGIRG---TPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRG 568

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
            V NI  YN+++   CK   VD+    L  M       D+ +YN +I    K     EA 
Sbjct: 569 CVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEAR 628

Query: 256 AVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGY 313
            V D+M + GI PD VTYN+L+  FC+E R  +A  + +++   G  P++VTY TLI G 
Sbjct: 629 QVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGL 688

Query: 314 CRANDLEEALRLREVMAAKG-VYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPD 372
            + N L +A  L   M   G V     TYN+I+ +LCKEG ++ A  L++ M    +  +
Sbjct: 689 SQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEAN 748

Query: 373 NVTCNTLINAYCKIG--DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL 430
            VT N  I+  CK G  D AS++     + E   + D+ +Y  +I G CKA+++D A +L
Sbjct: 749 TVTYNIFIDRLCKEGRLDEASSL-----LSEMDTLRDEVSYTTVIIGLCKAEQLDRASKL 803

Query: 431 LFGMLDA-GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFC 489
              M+   G   +  +++ L+D +      +  L LL   V RG    V  Y  +I   C
Sbjct: 804 AREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLC 863

Query: 490 KKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLK 549
           K +KVD A  LF+ M   GI+  SV YT L Y     G  K    +L++M          
Sbjct: 864 KLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEM---------- 913

Query: 550 IYRSFSASYAKDNEILDLFWSHV 572
                    + D EI DL W  V
Sbjct: 914 --------ASSDCEIDDLKWEDV 928



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 122/468 (26%), Positives = 217/468 (46%), Gaps = 19/468 (4%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHV 132
           N + S  ++ T+I  L K ++   A++++++     F+  P V+                
Sbjct: 326 NCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFV--PDVVT--------------- 368

Query: 133 LSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMV 192
            S L           +  ++  +M      P+L     L++ L K   T+  +++ + +V
Sbjct: 369 YSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLV 428

Query: 193 QLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHY 252
             G V ++  Y +++   CK   +DK  K++  M  +     + TY  L+   C+ G   
Sbjct: 429 SSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVD 488

Query: 253 EALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDG 312
           EA  +   M  +  + D + Y SL++G+C+  R +EA+++   I+G TP    Y  L+DG
Sbjct: 489 EAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRG-TPYIDVYNALMDG 547

Query: 313 YCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPD 372
           YC+   L+E   + E MA +G  P + TYN ++  LCK G++ +A   L  M+     PD
Sbjct: 548 YCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPD 607

Query: 373 NVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLF 432
            V+ N +I+   K      A +V ++M++AG+  D  TY  L+  FCK +  D A  +L 
Sbjct: 608 VVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILK 667

Query: 433 GMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDV-SVYRALIRRFCKK 491
            M+ AG  P   +Y+ L+ G    N      +L+ E +  G  V   + Y  +I R CK+
Sbjct: 668 NMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKE 727

Query: 492 EKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
             +  A  L + M G+G+  ++V Y        + G     S +L +M
Sbjct: 728 GCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEM 775



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 109/410 (26%), Positives = 188/410 (45%), Gaps = 16/410 (3%)

Query: 177 KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLF 236
           KD  T +V+ V+      G   +    N  +    ++   D++  +   M       D +
Sbjct: 104 KDPQTAIVFFVWAG--DRGFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSY 161

Query: 237 TYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI 296
           TY+ +I   C+     +A  + D+ +  G  P++  Y  L   FC+ GR+++A  +FR+I
Sbjct: 162 TYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNI 221

Query: 297 KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRD 356
              +P+ + Y  +I G+CR ND + AL   + M  + V P V TYN ++  LCK  +   
Sbjct: 222 --PSPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDK 279

Query: 357 ANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIH 416
           A+ +L+EM ++ + PD VT N++++  CK G    A  +   M E        TY  LI 
Sbjct: 280 ASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLIS 339

Query: 417 GFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCV 476
           G CK + +D AK+L+   + +GF P   +YS L DG C +   +   +L+ E   +G   
Sbjct: 340 GLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTP 399

Query: 477 DVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDIL 536
           ++  Y  LI   CK  K + A  L   +  +G + D V YT +     + G       ++
Sbjct: 400 NLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMV 459

Query: 537 DDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKEM 586
           + M +R    ++  Y +      +   + +            + HIFKEM
Sbjct: 460 EGMLKRGCTPSVITYTALMEGLCRTGRVDE------------AHHIFKEM 497



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 102/380 (26%), Positives = 158/380 (41%), Gaps = 58/380 (15%)

Query: 132 VLSWLVIFYANLKMTQ--DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYK 189
           V+S+ +I     K ++  +  QV DQM    + P       L+    K+   D    + K
Sbjct: 608 VVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILK 667

Query: 190 KMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKD-VRADLFTYNTLIALYCKK 248
            M++ GV  +   YN LI    +++ +    +L+ EM     V +   TYNT+I   CK+
Sbjct: 668 NMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKE 727

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYTT 308
           G   +AL + D M   G+  + VTYN  I   C+EGR+ EA  L  ++     + V+YTT
Sbjct: 728 GCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMD-TLRDEVSYTT 786

Query: 309 LIDGYCRANDLE------------------------------------EALRLREVMAAK 332
           +I G C+A  L+                                    EAL L  +M  +
Sbjct: 787 VIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQR 846

Query: 333 GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
           G  P V+TYN ++  LCK  ++  A  L +EM  + I   +V+   LI   C  G    A
Sbjct: 847 GCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEA 906

Query: 393 MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSY-SWLVD 451
           ++V   M  +   +D   ++            D+A    F      F P Y S+ S    
Sbjct: 907 LQVLEEMASSDCEIDDLKWE------------DVAPHSQF---QTTFGPCYSSFHSRFSS 951

Query: 452 GYCNKNNEEALLKLLDEFVS 471
            +C+   E    K   EFVS
Sbjct: 952 TWCSVPYETN--KAHKEFVS 969


>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
 gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 133/456 (29%), Positives = 227/456 (49%), Gaps = 14/456 (3%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           SVL  + K+   PD  +   + L+         ++ + +F++M      P + + + ++N
Sbjct: 148 SVLGKMFKLGIQPD--AITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVIN 205

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
            L K   T M  ++ +KM + G   N+  Y  +I + CK + V+    LL EM  + +  
Sbjct: 206 GLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPP 265

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           D+ TY+T++  +C  G   EA  + + M    + P+ VT+  L+ G C+EG + EAR +F
Sbjct: 266 DVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVF 325

Query: 294 RDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
             +  KGA PN  TY  L+DGYC  N ++EA ++ ++M  KG  P V +YN ++   CK 
Sbjct: 326 EAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKR 385

Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
            R+ +A  LL EM+EK++ PD VT +TL+   C++G    A+ +   M  +GL+ D  TY
Sbjct: 386 RRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTY 445

Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
             L+ G CK   +D A +LL  M ++   P    Y+ L++G       E   +L  +  +
Sbjct: 446 STLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFA 505

Query: 472 RGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKA 531
            G+   +  Y  +I+   K+   D A  LF  M+ +G L +S  Y  +   + +  +   
Sbjct: 506 DGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSST 565

Query: 532 CSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDL 567
              ++D+M  +R          FSA  +    +LDL
Sbjct: 566 AIRLIDEMVGKR----------FSADSSTFQMLLDL 591



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 126/406 (31%), Positives = 206/406 (50%), Gaps = 2/406 (0%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D L  F +M   N  P +      L S+AK +    V  +  +M   GV  N++  N+LI
Sbjct: 75  DALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILI 134

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           +  C+ + V     +L +M    ++ D  T+NTLI   C +G   EA+ + + M R G  
Sbjct: 135 NCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQ 194

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
           PD+++Y+++I+G C+ G    A +L R +  KG  PN V YTT+ID  C+   + +A+ L
Sbjct: 195 PDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDL 254

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
              M  +G+ P VVTY++IL   C  G + +A  L NEM  + + P+ VT   L++  CK
Sbjct: 255 LSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCK 314

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            G  + A  V   M + G   + +TY AL+ G+C   +MD A+++L  M+D G +P   S
Sbjct: 315 EGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHS 374

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+ L++GYC +   +    LL E   + L  D   Y  L++  C+  +   A  LF  M 
Sbjct: 375 YNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMC 434

Query: 506 GNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIY 551
            +G+L D + Y++L     + G       +L  M   ++   + +Y
Sbjct: 435 SSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLY 480



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 118/402 (29%), Positives = 202/402 (50%), Gaps = 6/402 (1%)

Query: 154 DQMRVHNLMPHLHACTVLLNSLAKDRLTDMVW--KVYKKMVQLGVVANIHLYNVLIHACC 211
           +QM +  +  ++++  +L+N L   RL  +V+   V  KM +LG+  +   +N LI+  C
Sbjct: 116 NQMDLFGVTHNVYSLNILINCLC--RLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRC 173

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
              ++ +   L  EM  +  + D+ +Y+T+I   CK G    AL +  +ME +G  P++V
Sbjct: 174 IEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLV 233

Query: 272 TYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
            Y ++I   C++  + +A  L  ++  +G  P+ VTY+T++ G+C    L EA  L   M
Sbjct: 234 AYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEM 293

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
             + V P  VT+  ++  LCKEG + +A  +   M +K   P+  T N L++ YC     
Sbjct: 294 VGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQM 353

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
             A KV + M++ G      +Y  LI+G+CK + +D AK LL  M +   +P   +YS L
Sbjct: 354 DEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTL 413

Query: 450 VDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGI 509
           + G C     +  L L  E  S GL  D+  Y  L+   CK   +D A +L   MQ + I
Sbjct: 414 MQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKI 473

Query: 510 LGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIY 551
             D V+Y  L    + AG+ +   ++   ++   +  T++ Y
Sbjct: 474 EPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTY 515



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 101/379 (26%), Positives = 188/379 (49%), Gaps = 19/379 (5%)

Query: 75  KHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLS 134
           K +L ++ T+I  L K+     A ++L ++  R     P V+     +H           
Sbjct: 229 KPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGI--PPDVVTYSTILHG---------- 276

Query: 135 WLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQL 194
                + +L    +   +F++M   N+MP+    T+L++ L K+ +      V++ M + 
Sbjct: 277 -----FCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKK 331

Query: 195 GVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEA 254
           G   N + YN L+   C ++ +D+ +K+L  M  K     + +YN LI  YCK+    EA
Sbjct: 332 GAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEA 391

Query: 255 LAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDG 312
            ++   M  + ++PD VTY++L+ G C+ GR +EA  LF+++   G  P+ +TY+TL+DG
Sbjct: 392 KSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDG 451

Query: 313 YCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPD 372
            C+   L+EAL+L + M    + P +V YN ++  +   G++  A  L +++    I P 
Sbjct: 452 LCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPT 511

Query: 373 NVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLF 432
             T   +I    K G +  A ++  +M + G + +  +Y  +I GF + ++   A  L+ 
Sbjct: 512 IRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLID 571

Query: 433 GMLDAGFSPSYCSYSWLVD 451
            M+   FS    ++  L+D
Sbjct: 572 EMVGKRFSADSSTFQMLLD 590



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 93/363 (25%), Positives = 167/363 (46%), Gaps = 43/363 (11%)

Query: 232 RADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA-- 289
           R  +  +   +    KK  +   +++ ++M+  G++ ++ + N LI+  CR   +  A  
Sbjct: 89  RPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILINCLCRLNHVVFAIS 148

Query: 290 --RRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRK 347
              ++F+   G  P+ +T+ TLI+G C   +++EA+ L   M  +G  P V++Y++++  
Sbjct: 149 VLGKMFK--LGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVING 206

Query: 348 LCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLD 407
           LCK G    A +LL +M EK   P+ V   T+I++ CK      AM + + M++ G+  D
Sbjct: 207 LCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPD 266

Query: 408 QFTYKALIHGFCKAKEMDIAKELLF----------------------------------- 432
             TY  ++HGFC    ++ A  +LF                                   
Sbjct: 267 VVTYSTILHGFCSLGHLNEAT-ILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVF 325

Query: 433 -GMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
             M   G  P+  +Y+ L+DGYC  N  +   K+LD  V +G    V  Y  LI  +CK+
Sbjct: 326 EAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKR 385

Query: 492 EKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIY 551
            ++D A+ L   M    +  D+V Y++L     + G P+   ++  +M    L+  L  Y
Sbjct: 386 RRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTY 445

Query: 552 RSF 554
            + 
Sbjct: 446 STL 448



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 82/310 (26%), Positives = 141/310 (45%), Gaps = 2/310 (0%)

Query: 253 EALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR--DIKGATPNHVTYTTLI 310
           +ALA   RM R    P +V +   +    ++ +      L    D+ G T N  +   LI
Sbjct: 75  DALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILI 134

Query: 311 DGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIA 370
           +  CR N +  A+ +   M   G+ P  +T+N+++   C EG I++A  L NEM  +   
Sbjct: 135 NCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQ 194

Query: 371 PDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL 430
           PD ++ +T+IN  CK G+T+ A+++  +M E G   +   Y  +I   CK   ++ A +L
Sbjct: 195 PDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDL 254

Query: 431 LFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCK 490
           L  M+D G  P   +YS ++ G+C+  +      L +E V R +  +   +  L+   CK
Sbjct: 255 LSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCK 314

Query: 491 KEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKI 550
           +  V  A+ +F  M   G   ++  Y +L   Y    +      +LD M  +     +  
Sbjct: 315 EGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHS 374

Query: 551 YRSFSASYAK 560
           Y      Y K
Sbjct: 375 YNILINGYCK 384


>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
 gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 129/431 (29%), Positives = 210/431 (48%), Gaps = 4/431 (0%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           SV + ++K+   PD  +   + L+     +      ++ FD        P ++  T ++N
Sbjct: 151 SVFSKMIKLGLQPD--AVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIIN 208

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
            L K   T     ++KKM + G   N+  YN+LI + CK   V++   +   M+ K +  
Sbjct: 209 GLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISP 268

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           D+FTYN+LI   C      EA A+ + M    I P+I T+N L+   C+EG++ EA+ +F
Sbjct: 269 DIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVF 328

Query: 294 RDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
           + +   G  P+ VTY++L+ GY    ++ EA +L + M  KG  P   +YN +++  CK 
Sbjct: 329 KTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKA 388

Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
            RI +A +L NEM  + + PDNV  NTLI+  C++G    A  +   M   G + D FTY
Sbjct: 389 KRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTY 448

Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
             L+ GFCK   +  A  L   M      P    Y+ L+D  C   N +   KL  E   
Sbjct: 449 SMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFV 508

Query: 472 RGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKA 531
           +GL  +V +Y  +I   CK+  +D A   F  M+G+G   D   Y  +   + +  +   
Sbjct: 509 QGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRGFLQYKDESR 568

Query: 532 CSDILDDMYRR 542
            + ++ +M  R
Sbjct: 569 AAQLIGEMRDR 579



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 120/419 (28%), Positives = 207/419 (49%), Gaps = 5/419 (1%)

Query: 155 QMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSS 214
           QM +  L P ++  ++L++  +  +  D+ + V+ KM++LG+  +   +N LI+  CK  
Sbjct: 120 QMELAGLSPDIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVG 179

Query: 215 DVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYN 274
              +  +   + E    +  ++TY T+I   CK G    A  +  +ME  G  P++VTYN
Sbjct: 180 KFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYN 239

Query: 275 SLIHGFCREGRMREARRLFRDIKGA--TPNHVTYTTLIDGYCRANDLEEALRLREVMAAK 332
            LI   C++  + EA  +F  +K    +P+  TY +LI G C     +EA  L   M + 
Sbjct: 240 ILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSL 299

Query: 333 GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
            + P + T+N ++  +CKEG++ +A  +   M E  + PD VT ++L+  Y    +   A
Sbjct: 300 NIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEA 359

Query: 393 MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
            K+ + M+  G   D F+Y  LI G+CKAK +D AK+L   M+  G +P   +Y+ L+ G
Sbjct: 360 RKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHG 419

Query: 453 YCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGD 512
            C          L     S G   D+  Y  L+  FCK+  +  A RLF +MQ   +  D
Sbjct: 420 LCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPD 479

Query: 513 SVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKD---NEILDLF 568
             +Y  L  A  + G  K    +  +++ + L+  ++IY +   +  K+   +E L+ F
Sbjct: 480 IAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAF 538



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 124/390 (31%), Positives = 193/390 (49%), Gaps = 3/390 (0%)

Query: 141 ANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAK-DRLTDMVWKVYKKMVQLGVVAN 199
           ++ +   D L  F+ M     +P +   T LL+++ K  +    V  + K+M   G+  +
Sbjct: 70  SSFRNIDDALASFNHMLHREPLPCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPD 129

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
           I+  ++LI        VD    +  +M    ++ D  T+NTLI   CK G   +A+   D
Sbjct: 130 IYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFD 189

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRAN 317
             E  G  P + TY ++I+G C+ G    A  LF+ ++  G  PN VTY  LID  C+  
Sbjct: 190 DFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDK 249

Query: 318 DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCN 377
            + EAL +   M AK + P + TYNS+++ LC   R ++A+ LLNEM    I P+  T N
Sbjct: 250 LVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFN 309

Query: 378 TLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA 437
            L++A CK G  + A  V   M E G+  D  TY +L++G+    E+  A++L   M+  
Sbjct: 310 VLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITK 369

Query: 438 GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYA 497
           G  P   SY+ L+ GYC     +   +L +E + +GL  D   Y  LI   C+  ++  A
Sbjct: 370 GCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREA 429

Query: 498 QRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
           Q LF  M  NG L D   Y+ L   + + G
Sbjct: 430 QDLFKNMHSNGNLPDLFTYSMLLDGFCKEG 459



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 168/309 (54%), Gaps = 2/309 (0%)

Query: 142 NLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIH 201
           N +  ++   + ++M   N+MP++    VL++++ K+        V+K M ++GV  ++ 
Sbjct: 282 NFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVV 341

Query: 202 LYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRM 261
            Y+ L++      ++ +  KL   M  K  + D F+YN LI  YCK     EA  + + M
Sbjct: 342 TYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEM 401

Query: 262 EREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDL 319
             +G++PD V YN+LIHG C+ GR+REA+ LF+++   G  P+  TY+ L+DG+C+   L
Sbjct: 402 IHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYL 461

Query: 320 EEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTL 379
            +A RL  VM +  + P +  YN ++  +CK G ++DA +L +E+  + + P+     T+
Sbjct: 462 GKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTI 521

Query: 380 INAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGF 439
           IN  CK G    A++    M   G   D+F+Y  +I GF + K+   A +L+  M D GF
Sbjct: 522 INNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEMRDRGF 581

Query: 440 SPSYCSYSW 448
                + +W
Sbjct: 582 VAEAGTTTW 590



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 106/368 (28%), Positives = 177/368 (48%), Gaps = 2/368 (0%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           +F +M      P++    +L++SL KD+L +    ++  M    +  +I  YN LI   C
Sbjct: 222 LFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLC 281

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
                 +   LL EM   ++  ++FT+N L+   CK+G   EA  V   M   G+ PD+V
Sbjct: 282 NFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVV 341

Query: 272 TYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           TY+SL++G+     + EAR+LF  +  KG  P+  +Y  LI GYC+A  ++EA +L   M
Sbjct: 342 TYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEM 401

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
             +G+ P  V YN+++  LC+ GR+R+A  L   M+     PD  T + L++ +CK G  
Sbjct: 402 IHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYL 461

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
             A ++   M    L  D   Y  LI   CK   +  A++L   +   G  P+   Y+ +
Sbjct: 462 GKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTI 521

Query: 450 VDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGI 509
           ++  C +   +  L+        G   D   Y  +IR F + +    A +L   M+  G 
Sbjct: 522 INNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEMRDRGF 581

Query: 510 LGDSVIYT 517
           + ++   T
Sbjct: 582 VAEAGTTT 589


>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 129/442 (29%), Positives = 222/442 (50%), Gaps = 17/442 (3%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG-VVANIHLYNVL 206
           + + + D+M    L P       +++ + K   T     + +KM ++  ++ N+ +Y+ +
Sbjct: 202 EAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAI 261

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           I + CK       + L  EM+ K +  DLFTYN++I  +C  G   +A  +   M    I
Sbjct: 262 IDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKI 321

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
           SPD+VTYN+LI+ F +EG+  EA  L+ ++  +G  PN +TY+++IDG+C+ N L+ A  
Sbjct: 322 SPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEH 381

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           +  +MA KG  P ++T+N+++   C   RI D   LL+EM E  +  D  T NTLI+ + 
Sbjct: 382 MFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFY 441

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGM------LDA- 437
            +GD  +A+ +   M+ +GL  D  T   L+ G C   ++  A E+   M      LDA 
Sbjct: 442 LVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDAS 501

Query: 438 ----GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEK 493
               G  P   +Y+ L+ G  N+       +L +E   RG+  D   Y ++I   CK+ +
Sbjct: 502 HPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSR 561

Query: 494 VDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRS 553
           +D A ++F+ M       + V +T+L   Y +AG      ++  +M RR ++     Y +
Sbjct: 562 LDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYIT 621

Query: 554 FSASYAKDNEI---LDLFWSHV 572
               + K   I   LD+F   +
Sbjct: 622 LICGFRKVGNINGALDIFQEMI 643



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 126/451 (27%), Positives = 222/451 (49%), Gaps = 18/451 (3%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           + ++ +M    +   +++ T+L+               + K+ +LG+  ++  +N L+H 
Sbjct: 99  ISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHG 158

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
            C    V +   L  +M     R ++ T+ TL+   C++G   EA+A+ DRM  +G+ P 
Sbjct: 159 LCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPT 218

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDIKGAT---PNHVTYTTLIDGYCRANDLEEALRLR 326
            +TY +++ G C++G    A  L R ++  +   PN V Y+ +ID  C+     +A  L 
Sbjct: 219 QITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLF 278

Query: 327 EVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKI 386
             M  KG++P + TYNS++   C  GR  DA +LL EM E+KI+PD VT N LINA+ K 
Sbjct: 279 TEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKE 338

Query: 387 GDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSY 446
           G    A ++ + ML  G++ +  TY ++I GFCK   +D A+ + + M   G SP+  ++
Sbjct: 339 GKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITF 398

Query: 447 SWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQG 506
           + L+DGYC     +  ++LL E    GL  D + Y  LI  F     ++ A  L   M  
Sbjct: 399 NTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMIS 458

Query: 507 NGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYA-----KD 561
           +G+  D V   +L       G+ K   ++   M + +        +   AS+       D
Sbjct: 459 SGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSK--------KDLDASHPFNGVEPD 510

Query: 562 NEILDLFWSHVVDRG--LMSKHIFKEMQLRN 590
            +  ++  S +++ G  L ++ +++EM  R 
Sbjct: 511 VQTYNILISGLINEGKFLEAEELYEEMPHRG 541



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 121/410 (29%), Positives = 207/410 (50%), Gaps = 7/410 (1%)

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
           +  +K  +D + +F  M     +P +     L+  + +    D+V  +Y+KM +  +  +
Sbjct: 54  FHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCD 113

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
           I+ + +LI   C  S +        ++    +  D+ T+NTL+   C +    EAL +  
Sbjct: 114 IYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFH 173

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREA----RRLFRDIKGATPNHVTYTTLIDGYCR 315
           +M      P++VT+ +L++G CREGR+ EA     R+  D  G  P  +TY T++DG C+
Sbjct: 174 QMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMED--GLQPTQITYGTIVDGMCK 231

Query: 316 ANDLEEALR-LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNV 374
             D   AL  LR++     + P VV Y++I+  LCK+GR  DA  L  EM EK I PD  
Sbjct: 232 KGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLF 291

Query: 375 TCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGM 434
           T N++I  +C  G  + A ++   MLE  +  D  TY ALI+ F K  +   A+EL   M
Sbjct: 292 TYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEM 351

Query: 435 LDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKV 494
           L  G  P+  +YS ++DG+C +N  +A   +     ++G   ++  +  LI  +C  +++
Sbjct: 352 LPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRI 411

Query: 495 DYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL 544
           D    L + M   G++ D+  Y +L + ++  G+  A  D+L +M    L
Sbjct: 412 DDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGL 461



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 117/422 (27%), Positives = 197/422 (46%), Gaps = 48/422 (11%)

Query: 157 RVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDV 216
            V +++P++   + +++SL KD        ++ +M + G+  ++  YN +I   C S   
Sbjct: 247 EVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRW 306

Query: 217 DKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSL 276
              E+LL EM  + +  D+ TYN LI  + K+G  +EA  + D M   GI P+ +TY+S+
Sbjct: 307 SDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSM 366

Query: 277 IHGFCREGRMREARRLF--RDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGV 334
           I GFC++ R+  A  +F     KG +PN +T+ TLIDGYC A  +++ + L   M   G+
Sbjct: 367 IDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGL 426

Query: 335 YPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMK 394
                TYN+++      G +  A  LL EM    + PD VTC+TL++  C  G    A++
Sbjct: 427 VADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALE 486

Query: 395 V------------------------------------KNRMLEA----------GLMLDQ 408
           +                                    + + LEA          G++ D 
Sbjct: 487 MFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDT 546

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
            TY ++I G CK   +D A ++   M    FSP+  +++ L++GYC     +  L+L  E
Sbjct: 547 ITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCE 606

Query: 469 FVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
              RG+  +   Y  LI  F K   ++ A  +F  M  +G+  D++   ++    W   E
Sbjct: 607 MGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEE 666

Query: 529 PK 530
            K
Sbjct: 667 LK 668



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 104/371 (28%), Positives = 170/371 (45%), Gaps = 13/371 (3%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D  Q+  +M    + P +     L+N+  K+       ++Y +M+  G++ N   Y+ +I
Sbjct: 308 DAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMI 367

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
              CK + +D  E +   M  K    +L T+NTLI  YC      + + +   M   G+ 
Sbjct: 368 DGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLV 427

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
            D  TYN+LIHGF   G +  A  L +++   G  P+ VT  TL+DG C    L++AL +
Sbjct: 428 ADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEM 487

Query: 326 REVMAAK-----------GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNV 374
            +VM              GV P V TYN ++  L  EG+  +A  L  EM  + I PD +
Sbjct: 488 FKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTI 547

Query: 375 TCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGM 434
           T +++I+  CK      A ++ + M       +  T+  LI+G+CKA  +D   EL   M
Sbjct: 548 TYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEM 607

Query: 435 LDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKV 494
              G   +  +Y  L+ G+    N    L +  E +S G+  D    R ++     KE++
Sbjct: 608 GRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEEL 667

Query: 495 DYAQRLFNLMQ 505
             A  +   +Q
Sbjct: 668 KRAVAMLEKLQ 678



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 104/385 (27%), Positives = 180/385 (46%), Gaps = 34/385 (8%)

Query: 98  QNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMR 157
           Q MLE+    D ++  +++NA VK     +G          F A         +++D+M 
Sbjct: 314 QEMLERKISPDVVTYNALINAFVK-----EGK--------FFEAE--------ELYDEML 352

Query: 158 VHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVD 217
              ++P+    + +++   K    D    ++  M   G   N+  +N LI   C +  +D
Sbjct: 353 PRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRID 412

Query: 218 KVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLI 277
              +LL EM    + AD  TYNTLI  +   G    AL +   M   G+ PDIVT ++L+
Sbjct: 413 DGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLL 472

Query: 278 HGFCREGRMREARRLFRDIK-------------GATPNHVTYTTLIDGYCRANDLEEALR 324
            G C  G++++A  +F+ ++             G  P+  TY  LI G        EA  
Sbjct: 473 DGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEE 532

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           L E M  +G+ P  +TY+S++  LCK+ R+ +A ++ + M  K  +P+ VT  TLIN YC
Sbjct: 533 LYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYC 592

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           K G     +++   M   G++ +  TY  LI GF K   ++ A ++   M+ +G  P   
Sbjct: 593 KAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTI 652

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEF 469
           +   ++ G  +K   +  + +L++ 
Sbjct: 653 TIRNMLTGLWSKEELKRAVAMLEKL 677



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 96/394 (24%), Positives = 165/394 (41%), Gaps = 64/394 (16%)

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRM-EREGIS-- 267
           C SS  +   +L C    +D  A     +      C+ G   E+L +Q    E +G+   
Sbjct: 10  CSSSPAESAARLFCTRSIRDTLAKASGES------CEAGFGGESLKLQSGFHEIKGLEDA 63

Query: 268 -------------PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDG 312
                        P +V +  L+    R  R      L++ +  K    +  ++T LI  
Sbjct: 64  IDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKC 123

Query: 313 YCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPD 372
           +C  + L  AL     +   G++P VVT+N++L  LC E R+ +A  L ++M E    P+
Sbjct: 124 FCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPN 183

Query: 373 NVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLF 432
            VT  TL+N  C+          + R++EA  +LD+                        
Sbjct: 184 VVTFTTLMNGLCR----------EGRIVEAVALLDR------------------------ 209

Query: 433 GMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLD--EFVSRGLCVDVSVYRALIRRFCK 490
            M++ G  P+  +Y  +VDG C K +  + L LL   E VS  +  +V +Y A+I   CK
Sbjct: 210 -MMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSH-IIPNVVIYSAIIDSLCK 267

Query: 491 KEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKI 550
             +   AQ LF  MQ  GI  D   Y S+   +  +G       +L +M  R++   +  
Sbjct: 268 DGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVT 327

Query: 551 YRSFSASYAKDNEILDL--FWSHVVDRGLMSKHI 582
           Y +   ++ K+ +  +    +  ++ RG++   I
Sbjct: 328 YNALINAFVKEGKFFEAEELYDEMLPRGIIPNTI 361


>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
 gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
 gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
 gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
 gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
 gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
          Length = 687

 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 129/442 (29%), Positives = 222/442 (50%), Gaps = 17/442 (3%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG-VVANIHLYNVL 206
           + + + D+M    L P       +++ + K   T     + +KM ++  ++ N+ +Y+ +
Sbjct: 202 EAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAI 261

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           I + CK       + L  EM+ K +  DLFTYN++I  +C  G   +A  +   M    I
Sbjct: 262 IDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKI 321

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
           SPD+VTYN+LI+ F +EG+  EA  L+ ++  +G  PN +TY+++IDG+C+ N L+ A  
Sbjct: 322 SPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEH 381

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           +  +MA KG  P ++T+N+++   C   RI D   LL+EM E  +  D  T NTLI+ + 
Sbjct: 382 MFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFY 441

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGM------LDA- 437
            +GD  +A+ +   M+ +GL  D  T   L+ G C   ++  A E+   M      LDA 
Sbjct: 442 LVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDAS 501

Query: 438 ----GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEK 493
               G  P   +Y+ L+ G  N+       +L +E   RG+  D   Y ++I   CK+ +
Sbjct: 502 HPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSR 561

Query: 494 VDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRS 553
           +D A ++F+ M       + V +T+L   Y +AG      ++  +M RR ++     Y +
Sbjct: 562 LDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYIT 621

Query: 554 FSASYAKDNEI---LDLFWSHV 572
               + K   I   LD+F   +
Sbjct: 622 LICGFRKVGNINGALDIFQEMI 643



 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 121/410 (29%), Positives = 206/410 (50%), Gaps = 7/410 (1%)

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
           +  +K  +D + +F  M     +P +     L+  + +    D+V  +Y+KM +  +  +
Sbjct: 54  FHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCD 113

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
           I+ +N+LI   C  S +        ++    +  D+ T+ TL+   C +    EAL    
Sbjct: 114 IYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFH 173

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREA----RRLFRDIKGATPNHVTYTTLIDGYCR 315
           +M      P++VT+ +L++G CREGR+ EA     R+  D  G  P  +TY T++DG C+
Sbjct: 174 QMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMED--GLQPTQITYGTIVDGMCK 231

Query: 316 ANDLEEALR-LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNV 374
             D   AL  LR++     + P VV Y++I+  LCK+GR  DA  L  EM EK I PD  
Sbjct: 232 KGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLF 291

Query: 375 TCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGM 434
           T N++I  +C  G  + A ++   MLE  +  D  TY ALI+ F K  +   A+EL   M
Sbjct: 292 TYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEM 351

Query: 435 LDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKV 494
           L  G  P+  +YS ++DG+C +N  +A   +     ++G   ++  +  LI  +C  +++
Sbjct: 352 LPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRI 411

Query: 495 DYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL 544
           D    L + M   G++ D+  Y +L + ++  G+  A  D+L +M    L
Sbjct: 412 DDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGL 461



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 123/451 (27%), Positives = 219/451 (48%), Gaps = 18/451 (3%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           + ++ +M    +   +++  +L+               + K+ +LG+  ++  +  L+H 
Sbjct: 99  ISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHG 158

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
            C    V +      +M     R ++ T+ TL+   C++G   EA+A+ DRM  +G+ P 
Sbjct: 159 LCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPT 218

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDIKGAT---PNHVTYTTLIDGYCRANDLEEALRLR 326
            +TY +++ G C++G    A  L R ++  +   PN V Y+ +ID  C+     +A  L 
Sbjct: 219 QITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLF 278

Query: 327 EVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKI 386
             M  KG++P + TYNS++   C  GR  DA +LL EM E+KI+PD VT N LINA+ K 
Sbjct: 279 TEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKE 338

Query: 387 GDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSY 446
           G    A ++ + ML  G++ +  TY ++I GFCK   +D A+ + + M   G SP+  ++
Sbjct: 339 GKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITF 398

Query: 447 SWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQG 506
           + L+DGYC     +  ++LL E    GL  D + Y  LI  F     ++ A  L   M  
Sbjct: 399 NTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMIS 458

Query: 507 NGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYA-----KD 561
           +G+  D V   +L       G+ K   ++   M + +        +   AS+       D
Sbjct: 459 SGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSK--------KDLDASHPFNGVEPD 510

Query: 562 NEILDLFWSHVVDRG--LMSKHIFKEMQLRN 590
            +  ++  S +++ G  L ++ +++EM  R 
Sbjct: 511 VQTYNILISGLINEGKFLEAEELYEEMPHRG 541



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 117/422 (27%), Positives = 197/422 (46%), Gaps = 48/422 (11%)

Query: 157 RVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDV 216
            V +++P++   + +++SL KD        ++ +M + G+  ++  YN +I   C S   
Sbjct: 247 EVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRW 306

Query: 217 DKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSL 276
              E+LL EM  + +  D+ TYN LI  + K+G  +EA  + D M   GI P+ +TY+S+
Sbjct: 307 SDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSM 366

Query: 277 IHGFCREGRMREARRLF--RDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGV 334
           I GFC++ R+  A  +F     KG +PN +T+ TLIDGYC A  +++ + L   M   G+
Sbjct: 367 IDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGL 426

Query: 335 YPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMK 394
                TYN+++      G +  A  LL EM    + PD VTC+TL++  C  G    A++
Sbjct: 427 VADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALE 486

Query: 395 V------------------------------------KNRMLEA----------GLMLDQ 408
           +                                    + + LEA          G++ D 
Sbjct: 487 MFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDT 546

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
            TY ++I G CK   +D A ++   M    FSP+  +++ L++GYC     +  L+L  E
Sbjct: 547 ITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCE 606

Query: 469 FVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
              RG+  +   Y  LI  F K   ++ A  +F  M  +G+  D++   ++    W   E
Sbjct: 607 MGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEE 666

Query: 529 PK 530
            K
Sbjct: 667 LK 668



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 104/371 (28%), Positives = 170/371 (45%), Gaps = 13/371 (3%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D  Q+  +M    + P +     L+N+  K+       ++Y +M+  G++ N   Y+ +I
Sbjct: 308 DAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMI 367

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
              CK + +D  E +   M  K    +L T+NTLI  YC      + + +   M   G+ 
Sbjct: 368 DGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLV 427

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
            D  TYN+LIHGF   G +  A  L +++   G  P+ VT  TL+DG C    L++AL +
Sbjct: 428 ADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEM 487

Query: 326 REVMAAK-----------GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNV 374
            +VM              GV P V TYN ++  L  EG+  +A  L  EM  + I PD +
Sbjct: 488 FKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTI 547

Query: 375 TCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGM 434
           T +++I+  CK      A ++ + M       +  T+  LI+G+CKA  +D   EL   M
Sbjct: 548 TYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEM 607

Query: 435 LDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKV 494
              G   +  +Y  L+ G+    N    L +  E +S G+  D    R ++     KE++
Sbjct: 608 GRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEEL 667

Query: 495 DYAQRLFNLMQ 505
             A  +   +Q
Sbjct: 668 KRAVAMLEKLQ 678



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 104/385 (27%), Positives = 180/385 (46%), Gaps = 34/385 (8%)

Query: 98  QNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMR 157
           Q MLE+    D ++  +++NA VK     +G          F A         +++D+M 
Sbjct: 314 QEMLERKISPDVVTYNALINAFVK-----EGK--------FFEAE--------ELYDEML 352

Query: 158 VHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVD 217
              ++P+    + +++   K    D    ++  M   G   N+  +N LI   C +  +D
Sbjct: 353 PRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRID 412

Query: 218 KVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLI 277
              +LL EM    + AD  TYNTLI  +   G    AL +   M   G+ PDIVT ++L+
Sbjct: 413 DGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLL 472

Query: 278 HGFCREGRMREARRLFRDIK-------------GATPNHVTYTTLIDGYCRANDLEEALR 324
            G C  G++++A  +F+ ++             G  P+  TY  LI G        EA  
Sbjct: 473 DGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEE 532

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           L E M  +G+ P  +TY+S++  LCK+ R+ +A ++ + M  K  +P+ VT  TLIN YC
Sbjct: 533 LYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYC 592

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           K G     +++   M   G++ +  TY  LI GF K   ++ A ++   M+ +G  P   
Sbjct: 593 KAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTI 652

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEF 469
           +   ++ G  +K   +  + +L++ 
Sbjct: 653 TIRNMLTGLWSKEELKRAVAMLEKL 677



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 94/394 (23%), Positives = 162/394 (41%), Gaps = 64/394 (16%)

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRM-EREGIS-- 267
           C SS  +   +L C    +D  A     +      C+ G   E+L +Q    E +G+   
Sbjct: 10  CSSSPAESAARLFCTRSIRDTLAKASGES------CEAGFGGESLKLQSGFHEIKGLEDA 63

Query: 268 -------------PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDG 312
                        P +V +  L+    R  R      L++ +  K    +  ++  LI  
Sbjct: 64  IDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKC 123

Query: 313 YCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPD 372
           +C  + L  AL     +   G++P VVT+ ++L  LC E R+ +A    ++M E    P+
Sbjct: 124 FCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPN 183

Query: 373 NVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLF 432
            VT  TL+N  C+ G          R++EA  +LD+                        
Sbjct: 184 VVTFTTLMNGLCREG----------RIVEAVALLDR------------------------ 209

Query: 433 GMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLD--EFVSRGLCVDVSVYRALIRRFCK 490
            M++ G  P+  +Y  +VDG C K +  + L LL   E VS  +  +V +Y A+I   CK
Sbjct: 210 -MMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSH-IIPNVVIYSAIIDSLCK 267

Query: 491 KEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKI 550
             +   AQ LF  MQ  GI  D   Y S+   +  +G       +L +M  R++   +  
Sbjct: 268 DGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVT 327

Query: 551 YRSFSASYAKDNEILDL--FWSHVVDRGLMSKHI 582
           Y +   ++ K+ +  +    +  ++ RG++   I
Sbjct: 328 YNALINAFVKEGKFFEAEELYDEMLPRGIIPNTI 361


>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
 gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
 gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
 gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 129/442 (29%), Positives = 222/442 (50%), Gaps = 17/442 (3%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG-VVANIHLYNVL 206
           + + + D+M    L P       +++ + K   T     + +KM ++  ++ N+ +Y+ +
Sbjct: 202 EAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAI 261

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           I + CK       + L  EM+ K +  DLFTYN++I  +C  G   +A  +   M    I
Sbjct: 262 IDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKI 321

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
           SPD+VTYN+LI+ F +EG+  EA  L+ ++  +G  PN +TY+++IDG+C+ N L+ A  
Sbjct: 322 SPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEH 381

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           +  +MA KG  P ++T+N+++   C   RI D   LL+EM E  +  D  T NTLI+ + 
Sbjct: 382 MFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFY 441

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGM------LDA- 437
            +GD  +A+ +   M+ +GL  D  T   L+ G C   ++  A E+   M      LDA 
Sbjct: 442 LVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDAS 501

Query: 438 ----GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEK 493
               G  P   +Y+ L+ G  N+       +L +E   RG+  D   Y ++I   CK+ +
Sbjct: 502 HPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSR 561

Query: 494 VDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRS 553
           +D A ++F+ M       + V +T+L   Y +AG      ++  +M RR ++     Y +
Sbjct: 562 LDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYIT 621

Query: 554 FSASYAKDNEI---LDLFWSHV 572
               + K   I   LD+F   +
Sbjct: 622 LICGFRKVGNINGALDIFQEMI 643



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 126/451 (27%), Positives = 222/451 (49%), Gaps = 18/451 (3%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           + ++ +M    +   +++ T+L+               + K+ +LG+  ++  +N L+H 
Sbjct: 99  ISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHG 158

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
            C    V +   L  +M     R ++ T+ TL+   C++G   EA+A+ DRM  +G+ P 
Sbjct: 159 LCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPT 218

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDIKGAT---PNHVTYTTLIDGYCRANDLEEALRLR 326
            +TY +++ G C++G    A  L R ++  +   PN V Y+ +ID  C+     +A  L 
Sbjct: 219 QITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLF 278

Query: 327 EVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKI 386
             M  KG++P + TYNS++   C  GR  DA +LL EM E+KI+PD VT N LINA+ K 
Sbjct: 279 TEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKE 338

Query: 387 GDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSY 446
           G    A ++ + ML  G++ +  TY ++I GFCK   +D A+ + + M   G SP+  ++
Sbjct: 339 GKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITF 398

Query: 447 SWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQG 506
           + L+DGYC     +  ++LL E    GL  D + Y  LI  F     ++ A  L   M  
Sbjct: 399 NTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMIS 458

Query: 507 NGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYA-----KD 561
           +G+  D V   +L       G+ K   ++   M + +        +   AS+       D
Sbjct: 459 SGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSK--------KDLDASHPFNGVEPD 510

Query: 562 NEILDLFWSHVVDRG--LMSKHIFKEMQLRN 590
            +  ++  S +++ G  L ++ +++EM  R 
Sbjct: 511 VQTYNILISGLINEGKFLEAEELYEEMPHRG 541



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 121/410 (29%), Positives = 207/410 (50%), Gaps = 7/410 (1%)

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
           +  +K  +D + +F  M     +P +     L+  + +    D+V  +Y+KM +  +  +
Sbjct: 54  FHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCD 113

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
           I+ + +LI   C  S +        ++    +  D+ T+NTL+   C +    EAL +  
Sbjct: 114 IYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFH 173

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREA----RRLFRDIKGATPNHVTYTTLIDGYCR 315
           +M      P++VT+ +L++G CREGR+ EA     R+  D  G  P  +TY T++DG C+
Sbjct: 174 QMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMED--GLQPTQITYGTIVDGMCK 231

Query: 316 ANDLEEALR-LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNV 374
             D   AL  LR++     + P VV Y++I+  LCK+GR  DA  L  EM EK I PD  
Sbjct: 232 KGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLF 291

Query: 375 TCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGM 434
           T N++I  +C  G  + A ++   MLE  +  D  TY ALI+ F K  +   A+EL   M
Sbjct: 292 TYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEM 351

Query: 435 LDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKV 494
           L  G  P+  +YS ++DG+C +N  +A   +     ++G   ++  +  LI  +C  +++
Sbjct: 352 LPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRI 411

Query: 495 DYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL 544
           D    L + M   G++ D+  Y +L + ++  G+  A  D+L +M    L
Sbjct: 412 DDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGL 461



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 117/422 (27%), Positives = 197/422 (46%), Gaps = 48/422 (11%)

Query: 157 RVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDV 216
            V +++P++   + +++SL KD        ++ +M + G+  ++  YN +I   C S   
Sbjct: 247 EVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRW 306

Query: 217 DKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSL 276
              E+LL EM  + +  D+ TYN LI  + K+G  +EA  + D M   GI P+ +TY+S+
Sbjct: 307 SDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSM 366

Query: 277 IHGFCREGRMREARRLF--RDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGV 334
           I GFC++ R+  A  +F     KG +PN +T+ TLIDGYC A  +++ + L   M   G+
Sbjct: 367 IDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGL 426

Query: 335 YPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMK 394
                TYN+++      G +  A  LL EM    + PD VTC+TL++  C  G    A++
Sbjct: 427 VADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALE 486

Query: 395 V------------------------------------KNRMLEA----------GLMLDQ 408
           +                                    + + LEA          G++ D 
Sbjct: 487 MFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDT 546

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
            TY ++I G CK   +D A ++   M    FSP+  +++ L++GYC     +  L+L  E
Sbjct: 547 ITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCE 606

Query: 469 FVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
              RG+  +   Y  LI  F K   ++ A  +F  M  +G+  D++   ++    W   E
Sbjct: 607 MGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEE 666

Query: 529 PK 530
            K
Sbjct: 667 LK 668



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 104/371 (28%), Positives = 170/371 (45%), Gaps = 13/371 (3%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D  Q+  +M    + P +     L+N+  K+       ++Y +M+  G++ N   Y+ +I
Sbjct: 308 DAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMI 367

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
              CK + +D  E +   M  K    +L T+NTLI  YC      + + +   M   G+ 
Sbjct: 368 DGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLV 427

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
            D  TYN+LIHGF   G +  A  L +++   G  P+ VT  TL+DG C    L++AL +
Sbjct: 428 ADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEM 487

Query: 326 REVMAAK-----------GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNV 374
            +VM              GV P V TYN ++  L  EG+  +A  L  EM  + I PD +
Sbjct: 488 FKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTI 547

Query: 375 TCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGM 434
           T +++I+  CK      A ++ + M       +  T+  LI+G+CKA  +D   EL   M
Sbjct: 548 TYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEM 607

Query: 435 LDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKV 494
              G   +  +Y  L+ G+    N    L +  E +S G+  D    R ++     KE++
Sbjct: 608 GRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEEL 667

Query: 495 DYAQRLFNLMQ 505
             A  +   +Q
Sbjct: 668 KRAVAMLEKLQ 678



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 104/385 (27%), Positives = 180/385 (46%), Gaps = 34/385 (8%)

Query: 98  QNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMR 157
           Q MLE+    D ++  +++NA VK     +G          F A         +++D+M 
Sbjct: 314 QEMLERKISPDVVTYNALINAFVK-----EGK--------FFEAE--------ELYDEML 352

Query: 158 VHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVD 217
              ++P+    + +++   K    D    ++  M   G   N+  +N LI   C +  +D
Sbjct: 353 PRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRID 412

Query: 218 KVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLI 277
              +LL EM    + AD  TYNTLI  +   G    AL +   M   G+ PDIVT ++L+
Sbjct: 413 DGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLL 472

Query: 278 HGFCREGRMREARRLFRDIK-------------GATPNHVTYTTLIDGYCRANDLEEALR 324
            G C  G++++A  +F+ ++             G  P+  TY  LI G        EA  
Sbjct: 473 DGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEE 532

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           L E M  +G+ P  +TY+S++  LCK+ R+ +A ++ + M  K  +P+ VT  TLIN YC
Sbjct: 533 LYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYC 592

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           K G     +++   M   G++ +  TY  LI GF K   ++ A ++   M+ +G  P   
Sbjct: 593 KAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTI 652

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEF 469
           +   ++ G  +K   +  + +L++ 
Sbjct: 653 TIRNMLTGLWSKEELKRAVAMLEKL 677



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 96/394 (24%), Positives = 165/394 (41%), Gaps = 64/394 (16%)

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRM-EREGIS-- 267
           C SS  +   +L C    +D  A     +      C+ G   E+L +Q    E +G+   
Sbjct: 10  CSSSPAESAARLFCTRSIRDTLAKASGES------CEAGFGGESLKLQSGFHEIKGLEDA 63

Query: 268 -------------PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDG 312
                        P +V +  L+    R  R      L++ +  K    +  ++T LI  
Sbjct: 64  IDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKC 123

Query: 313 YCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPD 372
           +C  + L  AL     +   G++P VVT+N++L  LC E R+ +A  L ++M E    P+
Sbjct: 124 FCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPN 183

Query: 373 NVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLF 432
            VT  TL+N  C+          + R++EA  +LD+                        
Sbjct: 184 VVTFTTLMNGLCR----------EGRIVEAVALLDR------------------------ 209

Query: 433 GMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLD--EFVSRGLCVDVSVYRALIRRFCK 490
            M++ G  P+  +Y  +VDG C K +  + L LL   E VS  +  +V +Y A+I   CK
Sbjct: 210 -MMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSH-IIPNVVIYSAIIDSLCK 267

Query: 491 KEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKI 550
             +   AQ LF  MQ  GI  D   Y S+   +  +G       +L +M  R++   +  
Sbjct: 268 DGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVT 327

Query: 551 YRSFSASYAKDNEILDL--FWSHVVDRGLMSKHI 582
           Y +   ++ K+ +  +    +  ++ RG++   I
Sbjct: 328 YNALINAFVKEGKFFEAEELYDEMLPRGIIPNTI 361


>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 129/442 (29%), Positives = 222/442 (50%), Gaps = 17/442 (3%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG-VVANIHLYNVL 206
           + + + D+M    L P       +++ + K   T     + +KM ++  ++ N+ +Y+ +
Sbjct: 202 EAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAI 261

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           I + CK       + L  EM+ K +  DLFTYN++I  +C  G   +A  +   M    I
Sbjct: 262 IDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKI 321

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
           SPD+VTYN+LI+ F +EG+  EA  L+ ++  +G  PN +TY+++IDG+C+ N L+ A  
Sbjct: 322 SPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEH 381

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           +  +MA KG  P ++T+N+++   C   RI D   LL+EM E  +  D  T NTLI+ + 
Sbjct: 382 MFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFY 441

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGM------LDA- 437
            +GD  +A+ +   M+ +GL  D  T   L+ G C   ++  A E+   M      LDA 
Sbjct: 442 LVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDAS 501

Query: 438 ----GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEK 493
               G  P   +Y+ L+ G  N+       +L +E   RG+  D   Y ++I   CK+ +
Sbjct: 502 HPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSR 561

Query: 494 VDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRS 553
           +D A ++F+ M       + V +T+L   Y +AG      ++  +M RR ++     Y +
Sbjct: 562 LDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYIT 621

Query: 554 FSASYAKDNEI---LDLFWSHV 572
               + K   I   LD+F   +
Sbjct: 622 LICGFRKVGNINGALDIFQEMI 643



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 121/410 (29%), Positives = 207/410 (50%), Gaps = 7/410 (1%)

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
           +  +K  +D + +F  M     +P +     L+  + +    D+V  +Y+KM +  +  +
Sbjct: 54  FHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCD 113

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
           I+ +N+LI   C  S +        ++    +  D+ T+ TL+   C +    EAL +  
Sbjct: 114 IYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFH 173

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREA----RRLFRDIKGATPNHVTYTTLIDGYCR 315
           +M      P++VT+ +L++G CREGR+ EA     R+  D  G  P  +TY T++DG C+
Sbjct: 174 QMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMED--GLQPTQITYGTIVDGMCK 231

Query: 316 ANDLEEALR-LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNV 374
             D   AL  LR++     + P VV Y++I+  LCK+GR  DA  L  EM EK I PD  
Sbjct: 232 KGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLF 291

Query: 375 TCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGM 434
           T N++I  +C  G  + A ++   MLE  +  D  TY ALI+ F K  +   A+EL   M
Sbjct: 292 TYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEM 351

Query: 435 LDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKV 494
           L  G  P+  +YS ++DG+C +N  +A   +     ++G   ++  +  LI  +C  +++
Sbjct: 352 LPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRI 411

Query: 495 DYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL 544
           D    L + M   G++ D+  Y +L + ++  G+  A  D+L +M    L
Sbjct: 412 DDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGL 461



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 124/451 (27%), Positives = 220/451 (48%), Gaps = 18/451 (3%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           + ++ +M    +   +++  +L+               + K+ +LG+  ++  +  L+H 
Sbjct: 99  ISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHG 158

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
            C    V +   L  +M     R ++ T+ TL+   C++G   EA+A+ DRM  +G+ P 
Sbjct: 159 LCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPT 218

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDIKGAT---PNHVTYTTLIDGYCRANDLEEALRLR 326
            +TY +++ G C++G    A  L R ++  +   PN V Y+ +ID  C+     +A  L 
Sbjct: 219 QITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLF 278

Query: 327 EVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKI 386
             M  KG++P + TYNS++   C  GR  DA +LL EM E+KI+PD VT N LINA+ K 
Sbjct: 279 TEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKE 338

Query: 387 GDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSY 446
           G    A ++ + ML  G++ +  TY ++I GFCK   +D A+ + + M   G SP+  ++
Sbjct: 339 GKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITF 398

Query: 447 SWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQG 506
           + L+DGYC     +  ++LL E    GL  D + Y  LI  F     ++ A  L   M  
Sbjct: 399 NTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMIS 458

Query: 507 NGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYA-----KD 561
           +G+  D V   +L       G+ K   ++   M + +        +   AS+       D
Sbjct: 459 SGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSK--------KDLDASHPFNGVEPD 510

Query: 562 NEILDLFWSHVVDRG--LMSKHIFKEMQLRN 590
            +  ++  S +++ G  L ++ +++EM  R 
Sbjct: 511 VQTYNILISGLINEGKFLEAEELYEEMPHRG 541



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 117/422 (27%), Positives = 197/422 (46%), Gaps = 48/422 (11%)

Query: 157 RVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDV 216
            V +++P++   + +++SL KD        ++ +M + G+  ++  YN +I   C S   
Sbjct: 247 EVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRW 306

Query: 217 DKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSL 276
              E+LL EM  + +  D+ TYN LI  + K+G  +EA  + D M   GI P+ +TY+S+
Sbjct: 307 SDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSM 366

Query: 277 IHGFCREGRMREARRLF--RDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGV 334
           I GFC++ R+  A  +F     KG +PN +T+ TLIDGYC A  +++ + L   M   G+
Sbjct: 367 IDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGL 426

Query: 335 YPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMK 394
                TYN+++      G +  A  LL EM    + PD VTC+TL++  C  G    A++
Sbjct: 427 VADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALE 486

Query: 395 V------------------------------------KNRMLEA----------GLMLDQ 408
           +                                    + + LEA          G++ D 
Sbjct: 487 MFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDT 546

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
            TY ++I G CK   +D A ++   M    FSP+  +++ L++GYC     +  L+L  E
Sbjct: 547 ITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCE 606

Query: 469 FVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
              RG+  +   Y  LI  F K   ++ A  +F  M  +G+  D++   ++    W   E
Sbjct: 607 MGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEE 666

Query: 529 PK 530
            K
Sbjct: 667 LK 668



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 104/371 (28%), Positives = 170/371 (45%), Gaps = 13/371 (3%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D  Q+  +M    + P +     L+N+  K+       ++Y +M+  G++ N   Y+ +I
Sbjct: 308 DAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMI 367

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
              CK + +D  E +   M  K    +L T+NTLI  YC      + + +   M   G+ 
Sbjct: 368 DGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLV 427

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
            D  TYN+LIHGF   G +  A  L +++   G  P+ VT  TL+DG C    L++AL +
Sbjct: 428 ADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEM 487

Query: 326 REVMAAK-----------GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNV 374
            +VM              GV P V TYN ++  L  EG+  +A  L  EM  + I PD +
Sbjct: 488 FKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTI 547

Query: 375 TCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGM 434
           T +++I+  CK      A ++ + M       +  T+  LI+G+CKA  +D   EL   M
Sbjct: 548 TYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEM 607

Query: 435 LDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKV 494
              G   +  +Y  L+ G+    N    L +  E +S G+  D    R ++     KE++
Sbjct: 608 GRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEEL 667

Query: 495 DYAQRLFNLMQ 505
             A  +   +Q
Sbjct: 668 KRAVAMLEKLQ 678



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 104/385 (27%), Positives = 180/385 (46%), Gaps = 34/385 (8%)

Query: 98  QNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMR 157
           Q MLE+    D ++  +++NA VK     +G          F A         +++D+M 
Sbjct: 314 QEMLERKISPDVVTYNALINAFVK-----EGK--------FFEAE--------ELYDEML 352

Query: 158 VHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVD 217
              ++P+    + +++   K    D    ++  M   G   N+  +N LI   C +  +D
Sbjct: 353 PRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRID 412

Query: 218 KVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLI 277
              +LL EM    + AD  TYNTLI  +   G    AL +   M   G+ PDIVT ++L+
Sbjct: 413 DGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLL 472

Query: 278 HGFCREGRMREARRLFRDIK-------------GATPNHVTYTTLIDGYCRANDLEEALR 324
            G C  G++++A  +F+ ++             G  P+  TY  LI G        EA  
Sbjct: 473 DGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEE 532

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           L E M  +G+ P  +TY+S++  LCK+ R+ +A ++ + M  K  +P+ VT  TLIN YC
Sbjct: 533 LYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYC 592

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           K G     +++   M   G++ +  TY  LI GF K   ++ A ++   M+ +G  P   
Sbjct: 593 KAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTI 652

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEF 469
           +   ++ G  +K   +  + +L++ 
Sbjct: 653 TIRNMLTGLWSKEELKRAVAMLEKL 677



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 94/394 (23%), Positives = 163/394 (41%), Gaps = 64/394 (16%)

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRM-EREGIS-- 267
           C SS  +   +L C    +D  A     +      C+ G   E+L +Q    E +G+   
Sbjct: 10  CSSSPAESAARLFCTRSIRDTLAKASGES------CEAGFGGESLKLQSGFHEIKGLEDA 63

Query: 268 -------------PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDG 312
                        P +V +  L+    R  R      L++ +  K    +  ++  LI  
Sbjct: 64  IDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKC 123

Query: 313 YCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPD 372
           +C  + L  AL     +   G++P VVT+ ++L  LC E R+ +A  L ++M E    P+
Sbjct: 124 FCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETTCRPN 183

Query: 373 NVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLF 432
            VT  TL+N  C+          + R++EA  +LD+                        
Sbjct: 184 VVTFTTLMNGLCR----------EGRIVEAVALLDR------------------------ 209

Query: 433 GMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLD--EFVSRGLCVDVSVYRALIRRFCK 490
            M++ G  P+  +Y  +VDG C K +  + L LL   E VS  +  +V +Y A+I   CK
Sbjct: 210 -MMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSH-IIPNVVIYSAIIDSLCK 267

Query: 491 KEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKI 550
             +   AQ LF  MQ  GI  D   Y S+   +  +G       +L +M  R++   +  
Sbjct: 268 DGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVT 327

Query: 551 YRSFSASYAKDNEILDL--FWSHVVDRGLMSKHI 582
           Y +   ++ K+ +  +    +  ++ RG++   I
Sbjct: 328 YNALINAFVKEGKFFEAEELYDEMLPRGIIPNTI 361


>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
          Length = 973

 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 157/622 (25%), Positives = 278/622 (44%), Gaps = 62/622 (9%)

Query: 2   ASLVALNSDTKFIKTISAIMLKGHWAKLL-NPNIASSLTSTAIHKVLLNLYNCCHIPSLS 60
           +S  AL  +   ++ I+ ++   +W  L+ + +I   L +  I  V+L   N    P   
Sbjct: 24  SSSQALTQNEDSVREITTLLNSHNWQALMESSDIPKKLNTDIIRSVILQ--NQVGDPKRL 81

Query: 61  CAFFKWAES--AVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNA 118
             FF W++        +  L     +   L  +  +  A +++ K  +R+  S  +VL +
Sbjct: 82  LNFFYWSQHKMGTSTAQQDLDVLSALAVNLCNSNWYGPASDLI-KCIIRNSDSPLAVLGS 140

Query: 119 LVKIHDDPDG--NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLA 176
           +VK +   +G  NS +   L+  Y  +    + + VF   +     P L +C  LL  L 
Sbjct: 141 IVKCYRSCNGSPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLL 200

Query: 177 KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFK------- 229
           K    ++ WKV+  M    V+ +++ Y  +I A CK  +V   +++L EM  K       
Sbjct: 201 KGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEA 260

Query: 230 ----------DVRADLFTYNTLIALYC--------------------------------- 246
                      +  DL+TY+ LI  +C                                 
Sbjct: 261 IELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDG 320

Query: 247 --KKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPN 302
             ++G   +A  ++D M   GI  +++ +N+L++G C+ G+M +A  + +++  KG  P+
Sbjct: 321 FMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPD 380

Query: 303 HVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLN 362
             TY+ LI+G+CR  ++  A  L + M  + + P V+TY+ I+  LC+ G ++  N +L 
Sbjct: 381 SQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILR 440

Query: 363 EMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAK 422
           EM    + P+ V   TL+ A+ K G    +  +  RM E G++ D F Y +LI GFCKAK
Sbjct: 441 EMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAK 500

Query: 423 EMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYR 482
            M+ A+  L  ML+    P+  +Y   +DGY      E   +  +E +S G+  +V +Y 
Sbjct: 501 RMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYT 560

Query: 483 ALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRR 542
           ALI   CK+  V  A  +F  +    +L D   Y+ L +   R G+      I  ++  +
Sbjct: 561 ALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEK 620

Query: 543 RLMITLKIYRSFSASYAKDNEI 564
            L+     Y S  +   K   +
Sbjct: 621 GLLPNAFTYNSLISGSCKQGNV 642



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 133/480 (27%), Positives = 236/480 (49%), Gaps = 21/480 (4%)

Query: 115 VLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNS 174
           ++  +++   +PD  S   S L+  +   +      ++ D+M+   L P +   +V++N 
Sbjct: 368 IMQEMMEKGVEPD--SQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIING 425

Query: 175 LAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRAD 234
           L +         + ++MV  G+  N  +Y  L+ A  K   V++   +L  M  + +  D
Sbjct: 426 LCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPD 485

Query: 235 LFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR 294
           +F YN+LI  +CK     EA      M    + P+  TY + I G+ + G M  A R F 
Sbjct: 486 VFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFN 545

Query: 295 DIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEG 352
           ++   G  PN   YT LI+G+C+  ++ EA  +   + ++ V   V TY+ ++  L + G
Sbjct: 546 EMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNG 605

Query: 353 RIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYK 412
           ++ +A  + +E+ EK + P+  T N+LI+  CK G+   A ++   M   G+  D  TY 
Sbjct: 606 KMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYN 665

Query: 413 ALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSR 472
            LI G CKA E++ AK L   +   G +P+  +Y+ +VDGYC   N  A  +LL+E + R
Sbjct: 666 ILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLR 725

Query: 473 GLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKAC 532
           G+  D  +Y  ++   CK+EK + A  LF  M   G    +V + +L   Y ++G+ +  
Sbjct: 726 GVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKG-FASTVSFNTLIEGYCKSGKLQEA 784

Query: 533 SDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLM--SKHIFKEMQLRN 590
           + +L++M          I + F  ++     ++D    H    G+M  +K ++ EMQ RN
Sbjct: 785 NHLLEEM----------IEKQFIPNHVTYTSLID----HNCKAGMMGEAKRLWLEMQERN 830



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 122/374 (32%), Positives = 194/374 (51%), Gaps = 3/374 (0%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N+H     +  Y+     +   + F++M    ++P++   T L+    K+      + V+
Sbjct: 520 NAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVF 579

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
           + ++   V+ ++  Y+VLIH   ++  + +   +  E++ K +  + FTYN+LI+  CK+
Sbjct: 580 RFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQ 639

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTY 306
           G   +A  + + M  +GI+PDIVTYN LI G C+ G +  A+ LF DI  +G TPN VTY
Sbjct: 640 GNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTY 699

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
             ++DGYC++ +   A +L E M  +GV P    YN IL   CKE +   A  L  EM E
Sbjct: 700 AAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLE 759

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
           K  A   V+ NTLI  YCK G    A  +   M+E   + +  TY +LI   CKA  M  
Sbjct: 760 KGFA-STVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGE 818

Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
           AK L   M +    P+  +Y+ L+ GY N  N   +  L +E V++G+  D   Y  +I 
Sbjct: 819 AKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMID 878

Query: 487 RFCKKEKVDYAQRL 500
            +C++  V  A +L
Sbjct: 879 AYCREGNVMEACKL 892



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 125/478 (26%), Positives = 233/478 (48%), Gaps = 7/478 (1%)

Query: 111 STPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTV 170
            T ++L  +V     P  N+ V + L+  +A     ++   + ++MR   ++P +     
Sbjct: 434 GTNAILREMVMNGLKP--NAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNS 491

Query: 171 LLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKD 230
           L+    K +  +       +M++  +  N H Y   I    K+ +++  ++   EM    
Sbjct: 492 LIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCG 551

Query: 231 VRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREAR 290
           V  ++  Y  LI  +CK+G   EA +V   +    +  D+ TY+ LIHG  R G+M EA 
Sbjct: 552 VLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAF 611

Query: 291 RLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
            +F ++  KG  PN  TY +LI G C+  ++++A +L E M  KG+ P +VTYN ++  L
Sbjct: 612 GIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGL 671

Query: 349 CKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ 408
           CK G I  A  L +++  + + P+ VT   +++ YCK  +  +A ++   ML  G+  D 
Sbjct: 672 CKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDA 731

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
           F Y  +++  CK ++ + A +L   ML+ GF+ S  S++ L++GYC     +    LL+E
Sbjct: 732 FIYNVILNFCCKEEKFEKALDLFQEMLEKGFA-STVSFNTLIEGYCKSGKLQEANHLLEE 790

Query: 469 FVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
            + +    +   Y +LI   CK   +  A+RL+  MQ   ++  +  YTSL + Y   G 
Sbjct: 791 MIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGN 850

Query: 529 PKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDL--FWSHVVDRGLMSKHIFK 584
               S + ++M  + +      Y     +Y ++  +++       ++ +G+  K  F+
Sbjct: 851 MSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMKSGFR 908



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 112/393 (28%), Positives = 183/393 (46%), Gaps = 26/393 (6%)

Query: 76  HSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSW 135
             +Q++  +IH L++N     A  +  ++  +  L      N+L+       GN    S 
Sbjct: 589 QDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLIS-GSCKQGNVDKAS- 646

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
                          Q+ ++M +  + P +    +L++ L K    +    ++  +   G
Sbjct: 647 ---------------QLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRG 691

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
           +  N   Y  ++   CKS +     +LL EM  + V  D F YN ++   CK+    +AL
Sbjct: 692 LTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKAL 751

Query: 256 AVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGY 313
            +   M  +G +   V++N+LI G+C+ G+++EA  L  ++  K   PNHVTYT+LID  
Sbjct: 752 DLFQEMLEKGFA-STVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHN 810

Query: 314 CRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDN 373
           C+A  + EA RL   M  + V P   TY S+L      G + + + L  EM  K I PD 
Sbjct: 811 CKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDK 870

Query: 374 VTCNTLINAYCKIGDTASAMKVKNRML------EAGLMLDQFTYKALIHGFCKAKEMDIA 427
           +T   +I+AYC+ G+   A K+K+ +L      ++G  L   T   +  GF  A  MD A
Sbjct: 871 MTYYVMIDAYCREGNVMEACKLKDEILVKGMPMKSGFRLGLPTCSVIARGFQIAGNMDEA 930

Query: 428 KELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEE 460
            E+L  M+  G+  +  S   LVDG  N  N E
Sbjct: 931 AEVLRSMVKFGWVSNTTSLGDLVDGNQNGANSE 963



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 54/256 (21%), Positives = 105/256 (41%), Gaps = 26/256 (10%)

Query: 83  TMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYAN 142
            +++   K + F+ A ++ +++  + F ST S  N L++                  Y  
Sbjct: 736 VILNFCCKEEKFEKALDLFQEMLEKGFASTVS-FNTLIE-----------------GYCK 777

Query: 143 LKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHL 202
               Q+   + ++M     +P+    T L++   K  +     +++ +M +  V+     
Sbjct: 778 SGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKT 837

Query: 203 YNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRM- 261
           Y  L+H      ++ +V  L  EM  K +  D  TY  +I  YC++G   EA  ++D + 
Sbjct: 838 YTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEIL 897

Query: 262 -----EREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYC 314
                 + G    + T + +  GF   G M EA  + R +   G   N  +   L+DG  
Sbjct: 898 VKGMPMKSGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDGNQ 957

Query: 315 RANDLEEALRLREVMA 330
              + E++  L + MA
Sbjct: 958 NGANSEDSDNLLKQMA 973


>gi|449488446|ref|XP_004158042.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g11710, mitochondrial-like [Cucumis sativus]
          Length = 653

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 152/530 (28%), Positives = 266/530 (50%), Gaps = 12/530 (2%)

Query: 4   LVALNSDTKFIKTISAIMLKGHWAKLLNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAF 63
           L++ +++    K I   + +  W  L    ++ SLT++ + +V+    N    P L+  F
Sbjct: 24  LLSPSTEDIICKAICVNLKQRRWKFL--EQVSPSLTNSLVCRVVREFRNS---PQLALEF 78

Query: 64  FKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIH 123
           + W E A  N+ HSL+S  T++H+L  +++F  A +++E + L +  S   VL  L+  +
Sbjct: 79  YNWVE-ARDNFSHSLESRCTLVHVLVNSRNFNDALSIMESLILXNGKSPLEVLGGLMNSY 137

Query: 124 DDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDM 183
           +  + N  V    V     L+  +    V  ++R+      +HA    LN L K   TD 
Sbjct: 138 EICNSNPAVFXARVRTCTQLRSVEGAYDVIRKLRLEGFWVTIHAWNNFLNLLLKLGETDK 197

Query: 184 VWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIA 243
              +YK+M+  G   N++ +N++I+A C    + +   ++  M   ++  ++ T+N +I 
Sbjct: 198 FXNMYKEMIASGYSENVNTFNLIIYALCNECKLLEAIYVVYLMLKIEIWPNVVTFNMIID 257

Query: 244 LYCKKGMHYEALAVQDRME---REGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--G 298
              K G    AL +    E      +SP+IV YN +I+GFC+  R+  A+ +  ++   G
Sbjct: 258 KANKMGEMDLALKLTRNTEVISGGSVSPNIVAYNCIINGFCKIRRLESAKNVLGEMIKLG 317

Query: 299 ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDAN 358
              N  TY TLIDGY R   L+ A RL + M    + P    YNS++  L  EG + +A+
Sbjct: 318 IYFNERTYATLIDGYARKGSLDVAFRLCDEMVEMRLIPDTFVYNSLIYWLYMEGELEEAS 377

Query: 359 RLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGF 418
            LL++M  ++I PD  T + L    C  G    A++V   ++E  L+ D FTY  LI+  
Sbjct: 378 FLLSDMINRRILPDEFTYSILTKGLCVSGHLNKALRVHYYIVERSLVRDAFTYNILINYM 437

Query: 419 CKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDV 478
            +++ +  AK+LL  M+  G  P   +Y   VDG+C +   EA +++ D+ V      ++
Sbjct: 438 FQSRNIAGAKQLLSSMIVGGIKPDMVTYGTPVDGHCKEGKIEAAVQIYDKTVKADGKSNL 497

Query: 479 SVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
            VY +++   CK+  +  A+ L + +Q NG L D V Y +L + +   GE
Sbjct: 498 VVYNSILDGLCKQGSIYAAKLLVDKLQQNGFL-DPVTYNTLLHGFCVNGE 546



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 103/361 (28%), Positives = 168/361 (46%), Gaps = 3/361 (0%)

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
           V  NI  YN +I+  CK   ++  + +L EM    +  +  TY TLI  Y +KG    A 
Sbjct: 283 VSPNIVAYNCIINGFCKIRRLESAKNVLGEMIKLGIYFNERTYATLIDGYARKGSLDVAF 342

Query: 256 AVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGY 313
            + D M    + PD   YNSLI+    EG + EA  L  D+  +   P+  TY+ L  G 
Sbjct: 343 RLCDEMVEMRLIPDTFVYNSLIYWLYMEGELEEASFLLSDMINRRILPDEFTYSILTKGL 402

Query: 314 CRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDN 373
           C +  L +ALR+   +  + +     TYN ++  + +   I  A +LL+ M    I PD 
Sbjct: 403 CVSGHLNKALRVHYYIVERSLVRDAFTYNILINYMFQSRNIAGAKQLLSSMIVGGIKPDM 462

Query: 374 VTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFG 433
           VT  T ++ +CK G   +A+++ ++ ++A    +   Y +++ G CK   +  AK L+  
Sbjct: 463 VTYGTPVDGHCKEGKIEAAVQIYDKTVKADGKSNLVVYNSILDGLCKQGSIYAAKLLVDK 522

Query: 434 MLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEK 493
           +   GF     +Y+ L+ G+C     E    L  E ++ G  V++  Y  +I   CK   
Sbjct: 523 LQQNGFLDP-VTYNTLLHGFCVNGEIEKAFALFLEMINVGSLVNIVSYNIMIHFLCKMGL 581

Query: 494 VDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRS 553
           +  A  L   M   GI+ D + YT+L   +      K   ++ D M  +  +   K YRS
Sbjct: 582 IQQAMELMRAMSSQGIIPDLITYTTLITNFVEICGSKDVIELHDYMVLKGAVPDRKTYRS 641

Query: 554 F 554
           F
Sbjct: 642 F 642



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 85/317 (26%), Positives = 157/317 (49%), Gaps = 3/317 (0%)

Query: 171 LLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKD 230
           L++  A+    D+ +++  +MV++ ++ +  +YN LI+      ++++   LL +M  + 
Sbjct: 328 LIDGYARKGSLDVAFRLCDEMVEMRLIPDTFVYNSLIYWLYMEGELEEASFLLSDMINRR 387

Query: 231 VRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREAR 290
           +  D FTY+ L    C  G   +AL V   +    +  D  TYN LI+   +   +  A+
Sbjct: 388 ILPDEFTYSILTKGLCVSGHLNKALRVHYYIVERSLVRDAFTYNILINYMFQSRNIAGAK 447

Query: 291 RLFRD--IKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
           +L     + G  P+ VTY T +DG+C+   +E A+++ +          +V YNSIL  L
Sbjct: 448 QLLSSMIVGGIKPDMVTYGTPVDGHCKEGKIEAAVQIYDKTVKADGKSNLVVYNSILDGL 507

Query: 349 CKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ 408
           CK+G I  A  L++++ +     D VT NTL++ +C  G+   A  +   M+  G +++ 
Sbjct: 508 CKQGSIYAAKLLVDKLQQNGFL-DPVTYNTLLHGFCVNGEIEKAFALFLEMINVGSLVNI 566

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
            +Y  +IH  CK   +  A EL+  M   G  P   +Y+ L+  +      + +++L D 
Sbjct: 567 VSYNIMIHFLCKMGLIQQAMELMRAMSSQGIIPDLITYTTLITNFVEICGSKDVIELHDY 626

Query: 469 FVSRGLCVDVSVYRALI 485
            V +G   D   YR+ +
Sbjct: 627 MVLKGAVPDRKTYRSFV 643



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 68/256 (26%), Positives = 134/256 (52%), Gaps = 1/256 (0%)

Query: 161 LMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVE 220
           ++P     ++L   L      +   +V+  +V+  +V +   YN+LI+   +S ++   +
Sbjct: 388 ILPDEFTYSILTKGLCVSGHLNKALRVHYYIVERSLVRDAFTYNILINYMFQSRNIAGAK 447

Query: 221 KLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGF 280
           +LL  M    ++ D+ TY T +  +CK+G    A+ + D+  +     ++V YNS++ G 
Sbjct: 448 QLLSSMIVGGIKPDMVTYGTPVDGHCKEGKIEAAVQIYDKTVKADGKSNLVVYNSILDGL 507

Query: 281 CREGRMREARRLFRDIK-GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVV 339
           C++G +  A+ L   ++     + VTY TL+ G+C   ++E+A  L   M   G    +V
Sbjct: 508 CKQGSIYAAKLLVDKLQQNGFLDPVTYNTLLHGFCVNGEIEKAFALFLEMINVGSLVNIV 567

Query: 340 TYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRM 399
           +YN ++  LCK G I+ A  L+  M+ + I PD +T  TLI  + +I  +   +++ + M
Sbjct: 568 SYNIMIHFLCKMGLIQQAMELMRAMSSQGIIPDLITYTTLITNFVEICGSKDVIELHDYM 627

Query: 400 LEAGLMLDQFTYKALI 415
           +  G + D+ TY++ +
Sbjct: 628 VLKGAVPDRKTYRSFV 643



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 53/214 (24%), Positives = 110/214 (51%), Gaps = 3/214 (1%)

Query: 170 VLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFK 229
           +L+N + + R      ++   M+  G+  ++  Y   +   CK   ++   ++  +    
Sbjct: 432 ILINYMFQSRNIAGAKQLLSSMIVGGIKPDMVTYGTPVDGHCKEGKIEAAVQIYDKTVKA 491

Query: 230 DVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA 289
           D +++L  YN+++   CK+G  Y A  + D++++ G   D VTYN+L+HGFC  G + +A
Sbjct: 492 DGKSNLVVYNSILDGLCKQGSIYAAKLLVDKLQQNGF-LDPVTYNTLLHGFCVNGEIEKA 550

Query: 290 RRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRK 347
             LF ++   G+  N V+Y  +I   C+   +++A+ L   M+++G+ P ++TY +++  
Sbjct: 551 FALFLEMINVGSLVNIVSYNIMIHFLCKMGLIQQAMELMRAMSSQGIIPDLITYTTLITN 610

Query: 348 LCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
             +    +D   L + M  K   PD  T  + ++
Sbjct: 611 FVEICGSKDVIELHDYMVLKGAVPDRKTYRSFVS 644



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 56/203 (27%), Positives = 97/203 (47%), Gaps = 3/203 (1%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           Q+   M V  + P +      ++   K+   +   ++Y K V+    +N+ +YN ++   
Sbjct: 448 QLLSSMIVGGIKPDMVTYGTPVDGHCKEGKIEAAVQIYDKTVKADGKSNLVVYNSILDGL 507

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           CK   +    KLL +   ++   D  TYNTL+  +C  G   +A A+   M   G   +I
Sbjct: 508 CKQGSI-YAAKLLVDKLQQNGFLDPVTYNTLLHGFCVNGEIEKAFALFLEMINVGSLVNI 566

Query: 271 VTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
           V+YN +IH  C+ G +++A  L R +  +G  P+ +TYTTLI  +      ++ + L + 
Sbjct: 567 VSYNIMIHFLCKMGLIQQAMELMRAMSSQGIIPDLITYTTLITNFVEICGSKDVIELHDY 626

Query: 329 MAAKGVYPGVVTYNSILRKLCKE 351
           M  KG  P   TY S +    +E
Sbjct: 627 MVLKGAVPDRKTYRSFVSPCLQE 649


>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
          Length = 629

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 120/396 (30%), Positives = 210/396 (53%), Gaps = 2/396 (0%)

Query: 146 TQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNV 205
             + + + DQM      P L     ++N L K    D+   + KKM +  + A++ +YN 
Sbjct: 201 ASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNT 260

Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
           +I   CK   +D    L  +ME K +R D+FTYN+LI+  C  G   +A  +   M    
Sbjct: 261 IIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERK 320

Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEAL 323
           I+P++VT+++LI  F +EG++ EA +L+ ++  +   P+  TY++LI+G+C  + L+EA 
Sbjct: 321 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 380

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
            + E+M +K  +P VVTYN++++  CK  R+ +   L  EM+++ +  + VT NTLI   
Sbjct: 381 HMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGL 440

Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY 443
            + GD   A K+  +M+  G+  D  TY  L+ G CK  +++ A  +   +  +   P  
Sbjct: 441 FQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDI 500

Query: 444 CSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNL 503
            +Y+ +++G C     E    L      +G+  +V +Y  +I  FC+K   + A  LF  
Sbjct: 501 YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFRE 560

Query: 504 MQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
           M+ +G L DS  Y +L  A  R G+  A ++++ +M
Sbjct: 561 MKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEM 596



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 127/424 (29%), Positives = 208/424 (49%), Gaps = 38/424 (8%)

Query: 142 NLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIH 201
           NLK+  D + +F +M     +P +     LL+++AK +  D+V  + ++M  L +  +++
Sbjct: 58  NLKL-DDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLY 116

Query: 202 LYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRM 261
            YN+LI+  C+ S +     +L +M       D+ T ++L+  YC      +A+A+ D+M
Sbjct: 117 SYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQM 176

Query: 262 EREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVT-------------- 305
              G  PD VT+N+LIHG     +  EA  L   +  +G  P+ VT              
Sbjct: 177 VEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDI 236

Query: 306 ---------------------YTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSI 344
                                Y T+IDG C+   +++A  L   M  KG+ P V TYNS+
Sbjct: 237 DLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSL 296

Query: 345 LRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGL 404
           +  LC  GR  DA+RLL+ M E+KI P+ VT + LI+A+ K G    A K+ + M++  +
Sbjct: 297 ISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 356

Query: 405 MLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLK 464
             D FTY +LI+GFC    +D AK +   M+     P+  +Y+ L+ G+C     E  ++
Sbjct: 357 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGME 416

Query: 465 LLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYW 524
           L  E   RGL  +   Y  LI+   +    D AQ++F  M  +G+  D + Y+ L     
Sbjct: 417 LFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLC 476

Query: 525 RAGE 528
           + G+
Sbjct: 477 KYGK 480



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 83/321 (25%), Positives = 159/321 (49%), Gaps = 2/321 (0%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D  ++   M    + P++   + L+++  K+       K+Y +M++  +  +I  Y+ LI
Sbjct: 308 DASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 367

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           +  C    +D+ + +   M  KD   ++ TYNTLI  +CK     E + +   M + G+ 
Sbjct: 368 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLV 427

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
            + VTYN+LI G  + G    A+++F+ +   G  P+ +TY+ L+DG C+   LE+AL +
Sbjct: 428 GNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVV 487

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
            E +    + P + TYN ++  +CK G++ D   L   ++ K + P+ +   T+I+ +C+
Sbjct: 488 FEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCR 547

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            G    A  +   M E G + D   Y  LI    +  +   + EL+  M   GF     +
Sbjct: 548 KGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDAST 607

Query: 446 YSWLVDGYCNKNNEEALLKLL 466
            S +++   +   E++ L++L
Sbjct: 608 ISMVINMLHDGRLEKSYLEML 628



 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 70/283 (24%), Positives = 129/283 (45%), Gaps = 8/283 (2%)

Query: 284 GRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNS 343
           G M ++R L        P+ V +  L+    +    +  + L E M    +   + +YN 
Sbjct: 69  GEMVQSRPL--------PSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYNI 120

Query: 344 ILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAG 403
           ++   C+  ++  A  +L +M +    PD VT ++L+N YC     + A+ + ++M+E G
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 180

Query: 404 LMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALL 463
              D  T+  LIHG     +   A  L+  M+  G  P   +Y  +V+G C + + +  L
Sbjct: 181 YKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLAL 240

Query: 464 KLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAY 523
            LL +     +  DV +Y  +I   CK + +D A  LFN M+  GI  D   Y SL    
Sbjct: 241 SLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCL 300

Query: 524 WRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
              G     S +L +M  R++   +  + +   ++ K+ ++++
Sbjct: 301 CNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVE 343



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 58/244 (23%), Positives = 103/244 (42%), Gaps = 3/244 (1%)

Query: 328 VMAAKGVYPGVVTYN---SILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           + + +GVY    +Y+    + R      ++ DA  L  EM + +  P  V  N L++A  
Sbjct: 32  LFSLRGVYFSAASYDYREKLSRNALLNLKLDDAIGLFGEMVQSRPLPSIVEFNKLLSAIA 91

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           K+      + +  RM    +  D ++Y  LI+ FC+  ++ +A  +L  M+  G+ P   
Sbjct: 92  KMKKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIV 151

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
           + S L++GYC+       + L+D+ V  G   D   +  LI       K   A  L + M
Sbjct: 152 TLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQM 211

Query: 505 QGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
              G   D V Y ++     + G+      +L  M + ++   + IY +      K   I
Sbjct: 212 VQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHI 271

Query: 565 LDLF 568
            D F
Sbjct: 272 DDAF 275


>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 129/442 (29%), Positives = 222/442 (50%), Gaps = 17/442 (3%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG-VVANIHLYNVL 206
           + + + D+M    L P       +++ + K   T     + +KM ++  ++ N+ +Y+ +
Sbjct: 202 EAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAI 261

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           I + CK       + L  EM+ K +  DLFTYN++I  +C  G   +A  +   M    I
Sbjct: 262 IDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKI 321

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
           SPD+VTYN+LI+ F +EG+  EA  L+ ++  +G  PN +TY+++IDG+C+ N L+ A  
Sbjct: 322 SPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEH 381

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           +  +MA KG  P ++T+N+++   C   RI D   LL+EM E  +  D  T NTLI+ + 
Sbjct: 382 MFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFY 441

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGM------LDA- 437
            +GD  +A+ +   M+ +GL  D  T   L+ G C   ++  A E+   M      LDA 
Sbjct: 442 LVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDAS 501

Query: 438 ----GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEK 493
               G  P   +Y+ L+ G  N+       +L +E   RG+  D   Y ++I   CK+ +
Sbjct: 502 HPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSR 561

Query: 494 VDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRS 553
           +D A ++F+ M       + V +T+L   Y +AG      ++  +M RR ++     Y +
Sbjct: 562 LDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYIT 621

Query: 554 FSASYAKDNEI---LDLFWSHV 572
               + K   I   LD+F   +
Sbjct: 622 LICGFRKVGNINGALDIFQEMI 643



 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 127/451 (28%), Positives = 220/451 (48%), Gaps = 18/451 (3%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           + ++ +M    +   +++ T+L+               + K+ +LG+  ++  +N L+H 
Sbjct: 99  ISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHG 158

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
            C    V +   L  +M     R ++ T+ TL+   C++G   EA+A+ DRM  +G+ P 
Sbjct: 159 LCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPT 218

Query: 270 IVTYNSLIHGFCREGRMREARRLFR---DIKGATPNHVTYTTLIDGYCRANDLEEALRLR 326
            +TY +++ G C+ G    A  L R   +I    PN V Y+ +ID  C+     +A  L 
Sbjct: 219 QITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLF 278

Query: 327 EVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKI 386
             M  KG++P + TYNS++   C  GR  DA +LL EM E+KI+PD VT N LINA+ K 
Sbjct: 279 TEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKE 338

Query: 387 GDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSY 446
           G    A ++ + ML  G++ +  TY ++I GFCK   +D A+ + + M   G SP+  ++
Sbjct: 339 GKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITF 398

Query: 447 SWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQG 506
           + L+DGYC     +  ++LL E    GL  D + Y  LI  F     ++ A  L   M  
Sbjct: 399 NTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMIS 458

Query: 507 NGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYA-----KD 561
           +G+  D V   +L       G+ K   ++   M + +        +   AS+       D
Sbjct: 459 SGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSK--------KDLDASHPFNGVEPD 510

Query: 562 NEILDLFWSHVVDRG--LMSKHIFKEMQLRN 590
            +  ++  S +++ G  L ++ +++EM  R 
Sbjct: 511 VQTYNILISGLINEGKFLEAEELYEEMPHRG 541



 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 121/410 (29%), Positives = 207/410 (50%), Gaps = 7/410 (1%)

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
           +  +K  +D + +F  M     +P +     L+  + +    D+V  +Y+KM +  +  +
Sbjct: 54  FHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCD 113

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
           I+ + +LI   C  S +        ++    +  D+ T+NTL+   C +    EAL +  
Sbjct: 114 IYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFH 173

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREA----RRLFRDIKGATPNHVTYTTLIDGYCR 315
           +M      P++VT+ +L++G CREGR+ EA     R+  D  G  P  +TY T++DG C+
Sbjct: 174 QMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMED--GLQPTQITYGTIVDGMCK 231

Query: 316 ANDLEEALR-LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNV 374
             D   AL  LR++     + P VV Y++I+  LCK+GR  DA  L  EM EK I PD  
Sbjct: 232 IGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLF 291

Query: 375 TCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGM 434
           T N++I  +C  G  + A ++   MLE  +  D  TY ALI+ F K  +   A+EL   M
Sbjct: 292 TYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEM 351

Query: 435 LDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKV 494
           L  G  P+  +YS ++DG+C +N  +A   +     ++G   ++  +  LI  +C  +++
Sbjct: 352 LPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRI 411

Query: 495 DYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL 544
           D    L + M   G++ D+  Y +L + ++  G+  A  D+L +M    L
Sbjct: 412 DDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGL 461



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 119/435 (27%), Positives = 202/435 (46%), Gaps = 52/435 (11%)

Query: 148 DGLQVFDQMR----VHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLY 203
           D +   D +R    + +++P++   + +++SL KD        ++ +M + G+  ++  Y
Sbjct: 234 DTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTY 293

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER 263
           N +I   C S      E+LL EM  + +  D+ TYN LI  + K+G  +EA  + D M  
Sbjct: 294 NSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLP 353

Query: 264 EGISPDIVTYNSLIHGFCREGRMREARRLF--RDIKGATPNHVTYTTLIDGYCRANDLEE 321
            GI P+ +TY+S+I GFC++ R+  A  +F     KG +PN +T+ TLIDGYC A  +++
Sbjct: 354 RGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDD 413

Query: 322 ALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
            + L   M   G+     TYN+++      G +  A  LL EM    + PD VTC+TL++
Sbjct: 414 GMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLD 473

Query: 382 AYCKIGDTASAMKV------------------------------------KNRMLEA--- 402
             C  G    A+++                                    + + LEA   
Sbjct: 474 GLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEEL 533

Query: 403 -------GLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCN 455
                  G++ D  TY ++I G CK   +D A ++   M    FSP+  +++ L++GYC 
Sbjct: 534 YEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCK 593

Query: 456 KNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVI 515
               +  L+L  E   RG+  +   Y  LI  F K   ++ A  +F  M  +G+  D++ 
Sbjct: 594 AGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTIT 653

Query: 516 YTSLAYAYWRAGEPK 530
             ++    W   E K
Sbjct: 654 IRNMLTGLWSKEELK 668



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 104/371 (28%), Positives = 170/371 (45%), Gaps = 13/371 (3%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D  Q+  +M    + P +     L+N+  K+       ++Y +M+  G++ N   Y+ +I
Sbjct: 308 DAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMI 367

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
              CK + +D  E +   M  K    +L T+NTLI  YC      + + +   M   G+ 
Sbjct: 368 DGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLV 427

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
            D  TYN+LIHGF   G +  A  L +++   G  P+ VT  TL+DG C    L++AL +
Sbjct: 428 ADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEM 487

Query: 326 REVMAAK-----------GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNV 374
            +VM              GV P V TYN ++  L  EG+  +A  L  EM  + I PD +
Sbjct: 488 FKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTI 547

Query: 375 TCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGM 434
           T +++I+  CK      A ++ + M       +  T+  LI+G+CKA  +D   EL   M
Sbjct: 548 TYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEM 607

Query: 435 LDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKV 494
              G   +  +Y  L+ G+    N    L +  E +S G+  D    R ++     KE++
Sbjct: 608 GRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEEL 667

Query: 495 DYAQRLFNLMQ 505
             A  +   +Q
Sbjct: 668 KRAVAMLEKLQ 678



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 104/385 (27%), Positives = 180/385 (46%), Gaps = 34/385 (8%)

Query: 98  QNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMR 157
           Q MLE+    D ++  +++NA VK     +G          F A         +++D+M 
Sbjct: 314 QEMLERKISPDVVTYNALINAFVK-----EGK--------FFEAE--------ELYDEML 352

Query: 158 VHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVD 217
              ++P+    + +++   K    D    ++  M   G   N+  +N LI   C +  +D
Sbjct: 353 PRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRID 412

Query: 218 KVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLI 277
              +LL EM    + AD  TYNTLI  +   G    AL +   M   G+ PDIVT ++L+
Sbjct: 413 DGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLL 472

Query: 278 HGFCREGRMREARRLFRDIK-------------GATPNHVTYTTLIDGYCRANDLEEALR 324
            G C  G++++A  +F+ ++             G  P+  TY  LI G        EA  
Sbjct: 473 DGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEE 532

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           L E M  +G+ P  +TY+S++  LCK+ R+ +A ++ + M  K  +P+ VT  TLIN YC
Sbjct: 533 LYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYC 592

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           K G     +++   M   G++ +  TY  LI GF K   ++ A ++   M+ +G  P   
Sbjct: 593 KAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTI 652

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEF 469
           +   ++ G  +K   +  + +L++ 
Sbjct: 653 TIRNMLTGLWSKEELKRAVAMLEKL 677



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/378 (22%), Positives = 158/378 (41%), Gaps = 32/378 (8%)

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           C SS  +   +L C    +D  A     +      C+ G   E+L +Q            
Sbjct: 10  CSSSPAESAARLFCTRSIRDTLAKASGES------CEAGFGGESLKLQ------------ 51

Query: 271 VTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
                   GF     + +A  LF D+      P+ V +  L+    R    +  + L + 
Sbjct: 52  -------SGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQK 104

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M  K +   + ++  +++  C   ++  A     ++ +  + PD VT NTL++  C    
Sbjct: 105 MERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDR 164

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
            + A+ + ++M E     +  T+  L++G C+   +  A  LL  M++ G  P+  +Y  
Sbjct: 165 VSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGT 224

Query: 449 LVDGYCNKNNEEALLKLLD--EFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQG 506
           +VDG C   +  + L LL   E +S  +  +V +Y A+I   CK  +   AQ LF  MQ 
Sbjct: 225 IVDGMCKIGDTVSALDLLRKMEEISH-IIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQE 283

Query: 507 NGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
            GI  D   Y S+   +  +G       +L +M  R++   +  Y +   ++ K+ +  +
Sbjct: 284 KGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFE 343

Query: 567 L--FWSHVVDRGLMSKHI 582
               +  ++ RG++   I
Sbjct: 344 AEELYDEMLPRGIIPNTI 361


>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic [Vitis vinifera]
          Length = 1022

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 163/620 (26%), Positives = 286/620 (46%), Gaps = 65/620 (10%)

Query: 8   NSDTKFIKTISAIM----LKGHWAKLLNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAF 63
           +SD   +K++++I+    L     K L P+++     +    V  N+      P  +  F
Sbjct: 111 SSDHALLKSVTSILSNPSLDSTQCKQLIPHLSPHQFDSVFFSVRRNVN-----PKTALNF 165

Query: 64  FKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDF---LSTP-----SV 115
           F +A  +   ++ +L+S+  ++  L  +     A+ +L ++  R        P      +
Sbjct: 166 FYFASDSC-GFRFTLRSYCVLMRSLIVSGFVSPARLLLIRLIDRKLPVLFGDPKNRHIEI 224

Query: 116 LNALVKIHDDPDGNSHVLSWLVIFYANLKMTQ-------DGLQVFDQMRVHNLMPHLHAC 168
            +A+  +++   G S V    V    ++  TQ       + + VF  +    + P +  C
Sbjct: 225 ASAMADLNEV--GESGVAVAAVDLLIHVYCTQFRNVGFRNAIGVFRFLANKGVFPTVKTC 282

Query: 169 TVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEF 228
           T LL+SL K    +  + V++ M Q GV  +++L++  I+A CK   V+   +L  +ME 
Sbjct: 283 TFLLSSLVKANELEKSYWVFETMRQ-GVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEK 341

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
             V  ++ TYN LI   CK G   EA   +++M ++G++  ++TY+ LI+G  +  +  E
Sbjct: 342 LGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNE 401

Query: 289 ARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILR 346
           A  + ++   KG TPN V Y TLIDGYC+  +L +ALR+R  M +KG+ P  VT NSI++
Sbjct: 402 ANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQ 461

Query: 347 KLCKEGRIRDAN-----------------------------------RLLNEMNEKKIAP 371
             CK G++  A                                    R L EM  + + P
Sbjct: 462 GFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRP 521

Query: 372 DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
           ++    TL+   CK G  + A+++  R+LE G   +  T  ALIHG CK   M  A  LL
Sbjct: 522 NDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLL 581

Query: 432 FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
             ML+ GF     +Y+ L+ G C +   E   KL  E V +G+  D   Y  LI   C+ 
Sbjct: 582 KKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRI 641

Query: 492 EKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIY 551
            K+D A  L+N  +   ++ +   Y  +   Y +A + +    +  ++  + L +   +Y
Sbjct: 642 GKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVY 701

Query: 552 RSFSASYAKDNEILDLFWSH 571
            +   +Y ++   ++ F  H
Sbjct: 702 NTLIRAYCRNGNTVEAFKLH 721



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 142/493 (28%), Positives = 242/493 (49%), Gaps = 40/493 (8%)

Query: 83  TMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYAN 142
           ++I    K    + A+ +LE++  R F   P     ++              WL +   N
Sbjct: 458 SIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIH-------------WLCM---N 501

Query: 143 LKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHL 202
            +  +  L+   +M + N+ P+    T L+  L K+       +++ ++++ G  AN+  
Sbjct: 502 SRF-ESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVT 560

Query: 203 YNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRME 262
            N LIH  CK+ ++ +  +LL +M  +    D  TYNTLI+  CK+G   E   ++  M 
Sbjct: 561 TNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMV 620

Query: 263 REGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGA--TPNHVTYTTLIDGYCRANDLE 320
           ++GI PD  TYN LIHG CR G++ EA  L+ + K     PN  TY  +IDGYC+A+ +E
Sbjct: 621 KQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIE 680

Query: 321 EALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLI 380
           E  +L   +  + +    V YN+++R  C+ G   +A +L ++M  K I P   T ++LI
Sbjct: 681 EGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLI 740

Query: 381 NAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFS 440
           +  C IG    A  + + M + GL+ +   Y ALI G+CK  +MD    +L  M      
Sbjct: 741 HGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIH 800

Query: 441 PSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRL 500
           P+  +Y+ ++DGY    + +   KLL E V +G+  D   Y  L   FCK+ K++  +  
Sbjct: 801 PNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGK-- 858

Query: 501 FNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFS--ASY 558
             L+  +G+  +S ++  L +  +R     AC+       RR  +   K + +++  +SY
Sbjct: 859 --LLAEDGVGFNSPLF--LIHEAFR-----ACT-------RRVDLWAKKFFANYTNPSSY 902

Query: 559 AKDNEILDLF-WS 570
                +L LF WS
Sbjct: 903 MTTKPLLVLFGWS 915



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 131/504 (25%), Positives = 232/504 (46%), Gaps = 20/504 (3%)

Query: 64  FKWAESAVPN-YKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKI 122
           F++ E  V +    +L ++  +I+ L K + F  A ++L++   + F     V N L+  
Sbjct: 368 FRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLI-- 425

Query: 123 HDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTD 182
               DG           Y  +    D L++   M    + P+      ++    K    +
Sbjct: 426 ----DG-----------YCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQME 470

Query: 183 MVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLI 242
               + ++M+  G   N   +  +IH  C +S  +   + L EM  +++R +     TL+
Sbjct: 471 QAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLV 530

Query: 243 ALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGAT 300
              CK+G H +A+ +  R+  +G   ++VT N+LIHG C+ G M+EA RL + +  +G  
Sbjct: 531 GGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFV 590

Query: 301 PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRL 360
            + +TY TLI G C+   +EE  +LR  M  +G+ P   TYN ++  +C+ G++ +A  L
Sbjct: 591 LDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNL 650

Query: 361 LNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCK 420
            NE   + + P+  T   +I+ YCK        K+   +L   L L+   Y  LI  +C+
Sbjct: 651 WNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCR 710

Query: 421 AKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSV 480
                 A +L   M   G  P+  +YS L+ G CN    E    L+DE    GL  +V  
Sbjct: 711 NGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVC 770

Query: 481 YRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMY 540
           Y ALI  +CK  ++D    +   M    I  + + YT +   Y ++G+ K  + +L +M 
Sbjct: 771 YTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMV 830

Query: 541 RRRLMITLKIYRSFSASYAKDNEI 564
            + ++     Y   +  + K+ +I
Sbjct: 831 GKGIVPDTVTYNVLTNGFCKEGKI 854


>gi|255554881|ref|XP_002518478.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223542323|gb|EEF43865.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 606

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 150/558 (26%), Positives = 265/558 (47%), Gaps = 16/558 (2%)

Query: 32  PNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKN 91
           PN+  SL    I K         + P L+  F  W      +  HS++S   +IH+L  +
Sbjct: 3   PNMTCSLVGRVICKFQ-------NSPQLALEFHDWVLEK-KSVLHSIESCCVVIHVLVNS 54

Query: 92  KHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQ 151
           K +  A  ++  +   + +S   VL+AL+  +D    +  V   LV     +  T+   +
Sbjct: 55  KRYDDALFIMGNLMNVNGISPLEVLDALISSYDICKSSPAVFDALVRTCTQIGATEGAYE 114

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           V  ++++      +HA    L+ L K    +  WK+YK+MV  G + N++ +N++I+A  
Sbjct: 115 VITKLQLDGFWVTVHAWNNFLSHLLKLNDVNRFWKMYKEMVSYGYIENVNTFNLIIYALG 174

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG---ISP 268
           K   + +   ++       +  ++ T+N +I    K G    AL +  +ME      + P
Sbjct: 175 KEGRLVEAVSVIYRSLKTGIWPNVVTFNMIIDGAIKMGAMDLALKLVRKMEVMSGCSVKP 234

Query: 269 DIVTYNSLIHGFCREGRMREARRLFRDIKGAT--PNHVTYTTLIDGYCRANDLEEALRLR 326
           D VTYNS ++GFC+ G +  A    +++ G    PN  TY TL+DGY R   LE A RL 
Sbjct: 235 DSVTYNSFVNGFCKIGNLAVAEEFKKEMLGKEIEPNVRTYATLVDGYTRVGSLENAFRLC 294

Query: 327 EVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKI 386
           + +  KG+ P  V YNSI+  L  EG +  A+ LL++M +K+I PD  T + +I   C+ 
Sbjct: 295 DELVEKGLLPNSVIYNSIIHWLSMEGDMEGASLLLSDMIDKRIYPDQFTYSIVIEGLCRN 354

Query: 387 GDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSY 446
           G    A K    +LE  L+ D F++  +I+  C++  +  AK+LL  M   G  P   ++
Sbjct: 355 GYLNEAFKFLQMILEMSLVRDAFSHNVVINYLCRSNNLAGAKQLLANMYVRGLVPDVVTF 414

Query: 447 SWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQG 506
             L+D +C     E  +++ ++ +  G   ++ +Y ++I  F K+   D A  L + ++ 
Sbjct: 415 GTLIDRHCKDGKVENAIQVYEKMIKTGEKPNLLIYNSVINGFAKEGSFDPAILLIDTLRR 474

Query: 507 NGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
            G+  D V Y +L + Y   G+      +  +M    ++ +   Y +   S  K   +L 
Sbjct: 475 MGLF-DVVTYNTLIHGYCNCGKIDQAFALFSEMRNSGILASHVTYNTLINSLCKAGHVLQ 533

Query: 567 L--FWSHVVDRGLMSKHI 582
                  +V RGL+  ++
Sbjct: 534 AKELMKMMVLRGLIPDYV 551



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 94/344 (27%), Positives = 174/344 (50%), Gaps = 3/344 (0%)

Query: 155 QMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSS 214
           +M    + P++     L++   +    +  +++  ++V+ G++ N  +YN +IH      
Sbjct: 261 EMLGKEIEPNVRTYATLVDGYTRVGSLENAFRLCDELVEKGLLPNSVIYNSIIHWLSMEG 320

Query: 215 DVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYN 274
           D++    LL +M  K +  D FTY+ +I   C+ G   EA      +    +  D  ++N
Sbjct: 321 DMEGASLLLSDMIDKRIYPDQFTYSIVIEGLCRNGYLNEAFKFLQMILEMSLVRDAFSHN 380

Query: 275 SLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAK 332
            +I+  CR   +  A++L  +  ++G  P+ VT+ TLID +C+   +E A+++ E M   
Sbjct: 381 VVINYLCRSNNLAGAKQLLANMYVRGLVPDVVTFGTLIDRHCKDGKVENAIQVYEKMIKT 440

Query: 333 GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
           G  P ++ YNS++    KEG    A  L++ +    +  D VT NTLI+ YC  G    A
Sbjct: 441 GEKPNLLIYNSVINGFAKEGSFDPAILLIDTLRRMGLF-DVVTYNTLIHGYCNCGKIDQA 499

Query: 393 MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
             + + M  +G++    TY  LI+  CKA  +  AKEL+  M+  G  P Y +Y+ L+  
Sbjct: 500 FALFSEMRNSGILASHVTYNTLINSLCKAGHVLQAKELMKMMVLRGLIPDYVTYTILITS 559

Query: 453 YCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDY 496
           +  K + E +++L D  V +G+  D   Y+ ++    ++E V++
Sbjct: 560 FSKKCSPEEVIELHDYMVLKGVVPDRQTYQTMVIPLLQEESVEF 603


>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
 gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
          Length = 597

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 126/425 (29%), Positives = 220/425 (51%), Gaps = 5/425 (1%)

Query: 155 QMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSS 214
           QM +  L P+++  ++ +N   + +  D+ + V  K+++LG+   I  +  LI+  CK  
Sbjct: 118 QMELVGLSPNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVG 177

Query: 215 DVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYN 274
           +  +  +L  +M  K  + D++TYNT+I   CK G    A  +  +ME  G  P++VTY+
Sbjct: 178 EFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYS 237

Query: 275 SLIHGFCREGRMREARRLFR--DIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAK 332
           +LI   CR+  + EA  +F     KG +P+  TYT+LI G C+ +  +EA  L   M + 
Sbjct: 238 TLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSL 297

Query: 333 GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
            + P +VT+N ++   CKEG++ +A  +L  M E  + P+ VT ++L+  Y    D   A
Sbjct: 298 NIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEA 357

Query: 393 MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
            K+ + M+  G   + F+Y  LI+G+CKAK +D A +L   M+  G +P+  SY+ L+ G
Sbjct: 358 RKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHG 417

Query: 453 YCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGD 512
           +C          L     + G   D+  Y  L+  FCK+  +  A RLF  MQ   +  +
Sbjct: 418 FCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPN 477

Query: 513 SVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKD---NEILDLFW 569
            V+YT L +A  ++G  K    +  +++ + L   +++Y +      K+   +E L+ F 
Sbjct: 478 LVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFR 537

Query: 570 SHVVD 574
           +   D
Sbjct: 538 NMEAD 542



 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 132/436 (30%), Positives = 224/436 (51%), Gaps = 18/436 (4%)

Query: 141 ANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAK-DRLTDMVWKVYKKMVQLGVVAN 199
           ++ +   D L  F+ M     +P +     LL+++ K  +  D+V  + K+M  +G+  N
Sbjct: 68  SSFRNIDDALASFNHMLHRKPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPN 127

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
           I+  ++ ++  C+   VD    +L ++    ++  + T+ TLI   CK G   +A+ + D
Sbjct: 128 IYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFD 187

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRAN 317
            M  +G  PD+ TYN++I+G C+ G    A  L + ++  G  PN VTY+TLID  CR  
Sbjct: 188 DMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDR 247

Query: 318 DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCN 377
            + EAL +   M AKG+ P + TY S+++ LCK  R ++A+ LLNEM    I PD VT N
Sbjct: 248 LVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFN 307

Query: 378 TLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA 437
            L++ +CK G  + A+ V   M E G+  +  TY +L++G+    ++  A++L   M+  
Sbjct: 308 VLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITK 367

Query: 438 GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYA 497
           G  P+  SY+ L++GYC     +  ++L +E + +GL  +   Y  LI  FC+  K+  A
Sbjct: 368 GCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREA 427

Query: 498 QRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSAS 557
           Q LF  M  NG L D   Y+ L   + + G                L    +++R+  ++
Sbjct: 428 QDLFRNMCTNGNLPDLFTYSILLDGFCKQG---------------YLGKAFRLFRAMQST 472

Query: 558 YAKDNEILDLFWSHVV 573
           Y K N ++     H +
Sbjct: 473 YLKPNLVMYTILVHAM 488



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 128/407 (31%), Positives = 202/407 (49%), Gaps = 8/407 (1%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQ--DGLQVFDQMRVHNLMPHLHACTVL 171
           SVL  ++K+   P     ++++  +     K+ +    +++FD M      P ++    +
Sbjct: 149 SVLAKVIKLGLQPT----IVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTI 204

Query: 172 LNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDV 231
           +N L K   T     + KKM + G   N+  Y+ LI + C+   V++   +   M+ K +
Sbjct: 205 INGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGI 264

Query: 232 RADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARR 291
             D+FTY +LI   CK     EA A+ + M    I PDIVT+N L+  FC+EG++ EA  
Sbjct: 265 SPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALG 324

Query: 292 LFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLC 349
           + + +   G  PN VTY++L+ GY    D+ EA +L  VM  KG  P + +YN ++   C
Sbjct: 325 VLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYC 384

Query: 350 KEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQF 409
           K  RI +A +L NEM  + + P+NV+ NTLI+ +C++G    A  +   M   G + D F
Sbjct: 385 KAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLF 444

Query: 410 TYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEF 469
           TY  L+ GFCK   +  A  L   M      P+   Y+ LV   C   N +   KL  E 
Sbjct: 445 TYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSEL 504

Query: 470 VSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIY 516
             +GL   V +Y  +I   CK+  +D A   F  M+ +G   D + Y
Sbjct: 505 FVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISY 551



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 137/519 (26%), Positives = 237/519 (45%), Gaps = 48/519 (9%)

Query: 12  KFIKTISAIMLKGHWAKL------------LNPNIASSLTSTAIHKVLLNLYNCCHIPSL 59
           +F K +SAI+  G +  +            L+PNI +         + +N +  C +  +
Sbjct: 94  QFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYT-------LSIFMNCF--CQLQRV 144

Query: 60  SCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSA----QNMLEKIALRDFLSTPSV 115
              F   A+      + ++ +  T+I+ L K   F  A     +M+ K    D  +  ++
Sbjct: 145 DLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTI 204

Query: 116 LNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSL 175
           +N L KI     G +   + L+      KM + G Q           P++   + L++SL
Sbjct: 205 INGLCKI-----GETAAAAGLL-----KKMEEAGCQ-----------PNMVTYSTLIDSL 243

Query: 176 AKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADL 235
            +DRL +    ++  M   G+  +I  Y  LI   CK S   +   LL EM   ++  D+
Sbjct: 244 CRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDI 303

Query: 236 FTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD 295
            T+N L+  +CK+G   EAL V   M   G+ P++VTY+SL++G+     + EAR+LF  
Sbjct: 304 VTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHV 363

Query: 296 I--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGR 353
           +  KG  PN  +Y  LI+GYC+A  ++EA++L   M  +G+ P  V+YN+++   C+ G+
Sbjct: 364 MITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGK 423

Query: 354 IRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKA 413
           +R+A  L   M      PD  T + L++ +CK G    A ++   M    L  +   Y  
Sbjct: 424 LREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTI 483

Query: 414 LIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
           L+H  CK+     A++L   +   G  P    Y+ +++G C +   +  L+      + G
Sbjct: 484 LVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADG 543

Query: 474 LCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGD 512
              D   Y  +IR   + +    A  L   M+  G + D
Sbjct: 544 CPPDEISYNVIIRGLLQHKDESRALLLVGEMRDRGFIAD 582


>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
 gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
          Length = 613

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 133/458 (29%), Positives = 224/458 (48%), Gaps = 5/458 (1%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           SVL  + K+   PD  +   + L+    N    ++ +++F++M      P++ + T ++N
Sbjct: 149 SVLGKMFKLGIHPD--AITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVIN 206

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
            L K   T M   V+KKM Q G   N+  Y+ +I + CK   V+   + L EM  + +  
Sbjct: 207 GLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPP 266

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           ++FTYN+++  +C  G   EA  +   M    + P+ VT+  L+ G C+EG + EAR +F
Sbjct: 267 NVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVF 326

Query: 294 RDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
             +  KG  P+  TY  L+DGYC    + EA ++ E+M  KG  PG  +YN ++   CK 
Sbjct: 327 ETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKS 386

Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
            R+ +A  LL EM  K + PD VT +TL+   C++G    A+ +   M   G   +  TY
Sbjct: 387 RRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTY 446

Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
             L+ GFCK   +D A +LL  M +    P+   Y+ L++G       E   +L  +   
Sbjct: 447 VILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFG 506

Query: 472 RGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKA 531
            G   D+  Y  +I+   K+   D A  LF  M+ +G L +S  Y  +   + +  +   
Sbjct: 507 DGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSST 566

Query: 532 CSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFW 569
              ++D+M  +R  + L  ++      ++D EI+  F 
Sbjct: 567 AIRLIDEMVGKRFSVNLSTFQMLLDLESQD-EIISQFM 603



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 119/420 (28%), Positives = 201/420 (47%), Gaps = 5/420 (1%)

Query: 154 DQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKS 213
           +QM +  +  ++++  +L+N L +    D    V  KM +LG+  +   +N LI+  C  
Sbjct: 117 NQMDLFRVTHNVYSLNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNE 176

Query: 214 SDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTY 273
             + +  +L  EM  +    ++ +Y T+I   CK G    A+ V  +ME+ G  P++VTY
Sbjct: 177 GKIKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTY 236

Query: 274 NSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAA 331
           +++I   C++  + +A     ++  +G  PN  TY +++ G+C    L EA RL + M  
Sbjct: 237 STIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVG 296

Query: 332 KGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTAS 391
           + V P  VT+  ++  LCKEG + +A  +   M EK + PD  T N L++ YC       
Sbjct: 297 RDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNE 356

Query: 392 AMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVD 451
           A KV   M+  G      +Y  LI+G+CK++ MD AK LL  M     +P   +YS L+ 
Sbjct: 357 AKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQ 416

Query: 452 GYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILG 511
           G C     +  L L  E  S G   ++  Y  L+  FCK   +D A +L   M+   +  
Sbjct: 417 GLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEP 476

Query: 512 DSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKD---NEILDLF 568
           + V YT L    + AG+ +   ++   ++       ++ Y        K+   +E  DLF
Sbjct: 477 NIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLF 536



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 119/399 (29%), Positives = 193/399 (48%), Gaps = 2/399 (0%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D L  F +M   N  P +      L S AK +    V  +  +M    V  N++  N+LI
Sbjct: 76  DALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILI 135

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           +  C+ + VD    +L +M    +  D  T+N LI   C +G   EA+ + + M + G  
Sbjct: 136 NCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHE 195

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRL 325
           P++++Y ++I+G C+ G    A  +F+ ++  G  PN VTY+T+ID  C+   + +A+  
Sbjct: 196 PNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEF 255

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
              M  +G+ P V TYNSI+   C  G++ +A RL  EM  + + P+ VT   L++  CK
Sbjct: 256 LSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCK 315

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            G  + A  V   M E G+  D  TY AL+ G+C  + M+ AK++   M+  G +P   S
Sbjct: 316 EGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHS 375

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+ L++GYC     +    LL E   + L  D   Y  L++  C+  +   A  LF  M 
Sbjct: 376 YNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMC 435

Query: 506 GNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL 544
             G   + V Y  L   + + G       +L  M  ++L
Sbjct: 436 SYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKL 474



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 60/258 (23%), Positives = 114/258 (44%)

Query: 301 PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRL 360
           P+ V +   +  + +       + L   M    V   V + N ++  LC+   +  +  +
Sbjct: 91  PSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILINCLCRLNHVDFSVSV 150

Query: 361 LNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCK 420
           L +M +  I PD +T N LIN  C  G    A+++ N M++ G   +  +Y  +I+G CK
Sbjct: 151 LGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCK 210

Query: 421 AKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSV 480
                +A ++   M   G  P+  +YS ++D  C        ++ L E V RG+  +V  
Sbjct: 211 TGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFT 270

Query: 481 YRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMY 540
           Y +++  FC   +++ A RLF  M G  ++ ++V +T L     + G       + + M 
Sbjct: 271 YNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMT 330

Query: 541 RRRLMITLKIYRSFSASY 558
            + +   +  Y +    Y
Sbjct: 331 EKGVEPDISTYNALMDGY 348


>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 676

 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 129/395 (32%), Positives = 207/395 (52%), Gaps = 2/395 (0%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           +G+ +F +MR  +  P +   TV++++L +         ++ +M + G   NIH Y V+I
Sbjct: 57  EGINIFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMI 116

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           +A CK + +++  ++L EM  K +   + TYN LI  YCK+GM   A  + D M     +
Sbjct: 117 NAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCN 176

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDIKGA--TPNHVTYTTLIDGYCRANDLEEALRL 325
           P+  TYN LI GFCR+  +  A  L   +  +  TP+ VTY +LI G C+   L+ A RL
Sbjct: 177 PNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRL 236

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
             +M   GV P   TY+  +  LCK+GRI +AN L N + EK I  + V    LI+ YCK
Sbjct: 237 LNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCK 296

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            G    A  + +RML    + +  TY ALI G CK +++  A  L+  M+  G   +  +
Sbjct: 297 AGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPT 356

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+ L+     + + +   ++LD+ VS G   DV +Y A I  FC +  +  A+ + ++M 
Sbjct: 357 YTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMF 416

Query: 506 GNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMY 540
             G++ D++ YT +  AY   G      D+L  M+
Sbjct: 417 ERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMF 451



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 131/398 (32%), Positives = 196/398 (49%), Gaps = 12/398 (3%)

Query: 158 VHNLMPHLHAC-------TVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           V N+MP    C       T L++ L +    D    ++KKM +      +  Y V++HA 
Sbjct: 26  VFNMMPK-KGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTVIVHAL 84

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
            +S    +   L  EM  +    ++ TY  +I   CK+    E   + D M  +G+ P +
Sbjct: 85  FESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSV 144

Query: 271 VTYNSLIHGFCREGRMREARRLFRDI---KGATPNHVTYTTLIDGYCRANDLEEALRLRE 327
            TYN+LI G+C+EG M EA +   D+       PN  TY  LI G+CR  ++  A+ L  
Sbjct: 145 PTYNALIDGYCKEG-MVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLS 203

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
            M    + P VVTYNS++   CK G +  A RLLN MNE  + PD  T +  I+  CK G
Sbjct: 204 KMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKG 263

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
               A  + N + E G+  ++  Y ALI G+CKA +MD A  LL  ML     P+  +Y+
Sbjct: 264 RIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYN 323

Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGN 507
            L+DG C +   +  L L++  + +GL   V  Y  LI    K+   DYA R+ + M  +
Sbjct: 324 ALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSS 383

Query: 508 GILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
           G   D  IYT+  +A+   G  K   D++  M+ R +M
Sbjct: 384 GYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVM 421



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 123/474 (25%), Positives = 210/474 (44%), Gaps = 48/474 (10%)

Query: 77  SLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWL 136
           ++ ++  MI+ + K    +  + +L+++  +  + +    NAL+      DG        
Sbjct: 108 NIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALI------DG-------- 153

Query: 137 VIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGV 196
              Y    M +   ++ D M  ++  P+      L+    + +       +  KM++  +
Sbjct: 154 ---YCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRL 210

Query: 197 VANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALA 256
             ++  YN LIH  CK   +D   +LL  M    V  D +TY+  I   CKKG   EA  
Sbjct: 211 TPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANV 270

Query: 257 VQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYC 314
           + + ++ +GI  + V Y +LI G+C+ G+M +A  L   +  +   PN  TY  LIDG C
Sbjct: 271 LFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLC 330

Query: 315 RANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNV 374
           +   ++EAL L E M  KG+   V TY  ++  + KEG    A+R+L++M      PD  
Sbjct: 331 KERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVY 390

Query: 375 TCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGM 434
                I+A+C  G+   A  + + M E G+M D  TY  +I  +     ++ A ++L  M
Sbjct: 391 IYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRM 450

Query: 435 LDAGFSPSYCSYSWLVD--------------GYCNKNNE---------------EALLKL 465
            D G  PS+ +YS L+                 C+                   E  L+L
Sbjct: 451 FDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVADVWKMMKFETALEL 510

Query: 466 LDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
            ++ +  G   +++ Y  LI   CK  ++  AQ+LF+ M   G+     IY SL
Sbjct: 511 FEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSL 564



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 95/391 (24%), Positives = 163/391 (41%), Gaps = 35/391 (8%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N  + + L+  Y       D   + D+M   + +P+      L++ L K+R       + 
Sbjct: 283 NEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLM 342

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
           + M+Q G+   +  Y +LI A  K  D D   ++L +M     + D++ Y   I  +C +
Sbjct: 343 ESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTR 402

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA----RRLFRDIKGATPNHV 304
           G   EA  +   M   G+ PD +TY  +I  +   G +  A    +R+F    G  P+H 
Sbjct: 403 GNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFD--TGCDPSHH 460

Query: 305 TYTTLIDGYCRAN-----------------------------DLEEALRLREVMAAKGVY 335
           TY+ LI    +                                 E AL L E M   G  
Sbjct: 461 TYSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVADVWKMMKFETALELFEKMLEHGCS 520

Query: 336 PGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKV 395
           P + TY  ++  LCK GR+  A +L + MNE+ ++P     N+L+N  C++G    A+++
Sbjct: 521 PNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRL 580

Query: 396 KNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCN 455
              M+E G +    +   L  G  +    + AK +   +L  G++    ++  L+DG   
Sbjct: 581 VGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCGYNDDEVAWKILIDGLLK 640

Query: 456 KNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
               +   +LL    +RG  +    YR LI 
Sbjct: 641 NGLSDGCSELLGVMEARGCQIHPQTYRMLIE 671



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 101/403 (25%), Positives = 159/403 (39%), Gaps = 48/403 (11%)

Query: 81  HWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFY 140
           +  +I    K      A ++L+++   D L   S  NAL+      DG            
Sbjct: 287 YTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALI------DG-----------L 329

Query: 141 ANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANI 200
              +  Q+ L + + M    L   +   T+L+ ++ K+   D   ++  +MV  G   ++
Sbjct: 330 CKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDV 389

Query: 201 HLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDR 260
           ++Y   IHA C   ++ + E ++  M  + V  D  TY  +I  Y   G+   A  V  R
Sbjct: 390 YIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKR 449

Query: 261 MEREGISPDIVTYNSLIHGFCREGRMREARRL----------FRDIK------------- 297
           M   G  P   TY+ LI    +E   ++ + +          F D+              
Sbjct: 450 MFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVADVWKMMKFETALE 509

Query: 298 --------GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLC 349
                   G +PN  TY  LI G C+   L  A +L + M  +GV P    YNS+L   C
Sbjct: 510 LFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCC 569

Query: 350 KEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQF 409
           + G   DA RL+  M E    P   + N L     + G    A  V + +L+ G   D+ 
Sbjct: 570 ELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCGYNDDEV 629

Query: 410 TYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
            +K LI G  K    D   ELL  M   G      +Y  L++G
Sbjct: 630 AWKILIDGLLKNGLSDGCSELLGVMEARGCQIHPQTYRMLIEG 672



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 68/286 (23%), Positives = 131/286 (45%), Gaps = 11/286 (3%)

Query: 309 LIDGYCRA---------NDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
           +++GYC+          ND+  A  +  +M  KG     V+Y +++  LC+ GR+ +   
Sbjct: 1   MVNGYCKLGNLVEANLNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGIN 60

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
           +  +M E    P   T   +++A  + G    A+ + + M E G   +  TY  +I+  C
Sbjct: 61  IFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMC 120

Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
           K  +++  + +L  M++ G  PS  +Y+ L+DGYC +   EA  ++LD   S     +  
Sbjct: 121 KETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNER 180

Query: 480 VYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
            Y  LI  FC+K+ V  A  L + M  + +    V Y SL +   + G   +   +L+ M
Sbjct: 181 TYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLM 240

Query: 540 YRRRLMITLKIYRSFSASYAKDNEI--LDLFWSHVVDRGLMSKHIF 583
               ++     Y  F  +  K   I   ++ ++ + ++G+ +  + 
Sbjct: 241 NENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVI 286



 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 68/307 (22%), Positives = 117/307 (38%), Gaps = 48/307 (15%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHV 132
            Y+  +  +   IH      + K A++M+  +  R  +               PD  ++ 
Sbjct: 384 GYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVM---------------PDALTYT 428

Query: 133 LSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDM--------- 183
           L  ++  Y  L +      V  +M      P  H  + L+  L K+ LT           
Sbjct: 429 L--VIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDS 486

Query: 184 -----------VWK---------VYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLL 223
                      VWK         +++KM++ G   NI+ Y  LI   CK   +   +KL 
Sbjct: 487 IPNVFFADVADVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLF 546

Query: 224 CEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCRE 283
             M  + V      YN+L+   C+ G++ +A+ +   M   G  P + + N L  G   E
Sbjct: 547 DHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEE 606

Query: 284 GRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTY 341
           G   +A+ +F ++   G   + V +  LIDG  +    +    L  VM A+G      TY
Sbjct: 607 GSKEKAKVVFSNLLQCGYNDDEVAWKILIDGLLKNGLSDGCSELLGVMEARGCQIHPQTY 666

Query: 342 NSILRKL 348
             ++  L
Sbjct: 667 RMLIEGL 673


>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Vitis vinifera]
          Length = 819

 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 139/458 (30%), Positives = 228/458 (49%), Gaps = 7/458 (1%)

Query: 127 DGNSHVLSWLVIFYANLKMT---QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDM 183
           DG    ++ L +F  +L  T   +D LQ+F ++    L P        + +  K      
Sbjct: 141 DGVLPSVASLNLFLESLVSTKRYEDTLQLFSEIVESGLRPDQFMYGKAIQAAVKLGDLKR 200

Query: 184 VWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIA 243
             ++   M + GV   + +YNV+I   CK   +   EKL  EM  + V  +  TYNTLI 
Sbjct: 201 AIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLID 260

Query: 244 LYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATP 301
            YCK G   EA  +++RM+ E + P I+T+NSL++G CR   M EA+R+  +++  G  P
Sbjct: 261 GYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVP 320

Query: 302 NHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLL 361
           +  TYTTL DG+ +  +++ ++ L E    KGV     T + +L  LCKEG +  A  +L
Sbjct: 321 DRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVL 380

Query: 362 NEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKA 421
            +  E  +AP  V  NT++N YC++GD   A     +M   GL  +  TY +L+  FC+ 
Sbjct: 381 KKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEM 440

Query: 422 KEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVY 481
           K M+ A++ +  M++ G  P+  +Y+ L+DGY      +   ++L+E   +GL  +V  Y
Sbjct: 441 KNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISY 500

Query: 482 RALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
             LI   CK   +  A+ +   M   G++ ++ IY  L      AG+ K      D+M  
Sbjct: 501 GCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVA 560

Query: 542 RRLMITLKIYRSFSASYAKDNEILDL--FWSHVVDRGL 577
           R ++ TL  Y        K  ++++     S +  +GL
Sbjct: 561 REIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGL 598



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 114/413 (27%), Positives = 211/413 (51%), Gaps = 4/413 (0%)

Query: 170 VLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFK 229
           +LL+  ++ ++     ++Y  M + GV+ ++   N+ + +   +   +   +L  E+   
Sbjct: 117 MLLSICSESKMVSESAELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTLQLFSEIVES 176

Query: 230 DVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA 289
            +R D F Y   I    K G    A+ +   M+R G+SP +  YN +I G C+E RM++A
Sbjct: 177 GLRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDA 236

Query: 290 RRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRK 347
            +LF ++  +   PN +TY TLIDGYC+   LEEA  +RE M  + V P ++T+NS+L  
Sbjct: 237 EKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNG 296

Query: 348 LCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLD 407
           LC+   + +A R+L EM      PD  T  TL + + K G+  +++ +    +  G+ + 
Sbjct: 297 LCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQIL 356

Query: 408 QFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLD 467
            +T   L++  CK   M+ A+E+L   L+ G +P    ++ +V+GYC   +       ++
Sbjct: 357 DYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIE 416

Query: 468 EFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
           +  + GL  +   Y +L+++FC+ + ++ A++    M   G+L +   Y +L   Y R+ 
Sbjct: 417 KMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSC 476

Query: 528 EPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEIL--DLFWSHVVDRGLM 578
               C  IL++M ++ L   +  Y        KD  IL  ++    +V RG++
Sbjct: 477 LFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVV 529



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 130/500 (26%), Positives = 234/500 (46%), Gaps = 20/500 (4%)

Query: 54  CHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTP 113
           C +  L  AF       V N + ++ +  ++++ L + +  + AQ +LE++ +  F+   
Sbjct: 263 CKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDR 322

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
                L       DG+    +       + +  + G+Q+ D           + C++LLN
Sbjct: 323 FTYTTLF------DGHLKCGNVDASITLSEEAVRKGVQILD-----------YTCSILLN 365

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
           +L K+   +   +V KK ++ G+      +N +++  C+  D++K    + +ME   +R 
Sbjct: 366 ALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRP 425

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           +  TYN+L+  +C+     EA     +M  +G+ P++ TYN+LI G+ R        ++ 
Sbjct: 426 NHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQIL 485

Query: 294 RDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
            ++  KG  PN ++Y  LI+  C+  ++ EA  +   M  +GV P    YN ++   C  
Sbjct: 486 EEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIA 545

Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
           G+++DA R  +EM  ++I P  VT N LIN  CK G    A  + + +   GL  D  TY
Sbjct: 546 GKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITY 605

Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
            +LI G+  A  +  A EL   M  +G  P+  +Y  L+ G C K     + K+  E + 
Sbjct: 606 NSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAG-CGKEGLVLVEKIYQEMLQ 664

Query: 472 RGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKA 531
             L  D  +Y ALI  + +   V  A  L + M+  GI  D + Y  L   +++ G    
Sbjct: 665 MNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGRMHK 724

Query: 532 CSDILDDMYRRRLMITLKIY 551
             ++++DM  R L+   + Y
Sbjct: 725 VKNLVNDMKIRGLIPKTETY 744



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 114/424 (26%), Positives = 204/424 (48%), Gaps = 2/424 (0%)

Query: 144 KMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLY 203
           K  +D  ++FD+M    + P+      L++   K    +  + + ++M    V   I  +
Sbjct: 231 KRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITF 290

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER 263
           N L++  C++  +++ +++L EME      D FTY TL   + K G    ++ + +   R
Sbjct: 291 NSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVR 350

Query: 264 EGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEE 321
           +G+     T + L++  C+EG M +A  + +     G  P  V + T+++GYC+  D+ +
Sbjct: 351 KGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINK 410

Query: 322 ALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
           A    E M A G+ P  VTYNS+++K C+   + +A + + +M EK + P+  T NTLI+
Sbjct: 411 AYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLID 470

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
            Y +        ++   M + GL  +  +Y  LI+  CK   +  A+ +L  M+  G  P
Sbjct: 471 GYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVP 530

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
           +   Y+ L+DG C     +   +  DE V+R +   +  Y  LI   CKK KV  A+ L 
Sbjct: 531 NAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLA 590

Query: 502 NLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKD 561
           + +   G+  D + Y SL   Y  AG  +   ++ + M +  +  TL  Y    A   K+
Sbjct: 591 SEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGKE 650

Query: 562 NEIL 565
             +L
Sbjct: 651 GLVL 654



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 102/352 (28%), Positives = 171/352 (48%), Gaps = 3/352 (0%)

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           LV  +  +K  ++  +   +M    ++P++     L++   +  L D  +++ ++M + G
Sbjct: 433 LVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKG 492

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
           +  N+  Y  LI+  CK +++ + E +L +M  + V  +   YN LI   C  G   +A 
Sbjct: 493 LKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAF 552

Query: 256 AVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGY 313
              D M    I P +VTYN LI+G C++G++ EA  L  +I  KG + + +TY +LI GY
Sbjct: 553 RFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGY 612

Query: 314 CRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDN 373
             A ++++AL L E M   G+ P + TY+ ++    KEG +    ++  EM +  + PD 
Sbjct: 613 SSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGKEGLVL-VEKIYQEMLQMNLVPDR 671

Query: 374 VTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFG 433
           V  N LI+ Y + GD   A  + + M   G+  D+ TY  LI G  K   M   K L+  
Sbjct: 672 VIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVND 731

Query: 434 MLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
           M   G  P   +Y  L+ G+C   + +       E    G    VS+   LI
Sbjct: 732 MKIRGLIPKTETYDILIVGHCKLKDFDGAYVWYREMFENGFTPSVSICDNLI 783



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 97/305 (31%), Positives = 145/305 (47%), Gaps = 3/305 (0%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
            Q+ ++M    L P++ +   L+N L KD        +   MV  GVV N  +YN+LI  
Sbjct: 482 FQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDG 541

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
            C +  +    +   EM  +++   L TYN LI   CKKG   EA  +   + R+G+S D
Sbjct: 542 SCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFD 601

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLRE 327
           ++TYNSLI G+   G +++A  L+  +K  G  P   TY  LI G C    L    ++ +
Sbjct: 602 VITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAG-CGKEGLVLVEKIYQ 660

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
            M    + P  V YN+++    + G ++ A  L + M  + I PD +T N LI  + K G
Sbjct: 661 EMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEG 720

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
                  + N M   GL+    TY  LI G CK K+ D A      M + GF+PS     
Sbjct: 721 RMHKVKNLVNDMKIRGLIPKTETYDILIVGHCKLKDFDGAYVWYREMFENGFTPSVSICD 780

Query: 448 WLVDG 452
            L+ G
Sbjct: 781 NLITG 785



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 91/330 (27%), Positives = 144/330 (43%), Gaps = 55/330 (16%)

Query: 75  KHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLS 134
           K ++ S+  +I+ L K+ +   A+ +L  +  R  +    + N L+      DG+     
Sbjct: 494 KPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLI------DGSC---- 543

Query: 135 WLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAK----------------- 177
                   LK   D  + FD+M    ++P L    +L+N L K                 
Sbjct: 544 ----IAGKLK---DAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRK 596

Query: 178 ----DRLT--------------DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKV 219
               D +T                  ++Y+ M + G+   ++ Y+ LI  C K   V  V
Sbjct: 597 GLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGKEGLV-LV 655

Query: 220 EKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHG 279
           EK+  EM   ++  D   YN LI  Y + G   +A ++   ME +GI PD +TYN LI G
Sbjct: 656 EKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILG 715

Query: 280 FCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPG 337
             +EGRM + + L  D  I+G  P   TY  LI G+C+  D + A      M   G  P 
Sbjct: 716 HFKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHCKLKDFDGAYVWYREMFENGFTPS 775

Query: 338 VVTYNSILRKLCKEGRIRDANRLLNEMNEK 367
           V   ++++  L +EGR  DA+ + +EMN K
Sbjct: 776 VSICDNLITGLREEGRSHDADVICSEMNMK 805


>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 667

 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 114/367 (31%), Positives = 196/367 (53%), Gaps = 2/367 (0%)

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
           P       L+N L  +        +  +MV+ G   N+  YN +++  CKS D      L
Sbjct: 133 PDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDL 192

Query: 223 LCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR 282
           L +M+ ++V+AD+FTY+T+I   C+ G    A+++   ME +GI   +VTYNSL+ G C+
Sbjct: 193 LRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCK 252

Query: 283 EGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVT 340
            G+  +  +L +D+  +   PN +T+  LID + +   L+EA  L + M  KG+ P  +T
Sbjct: 253 AGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTIT 312

Query: 341 YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML 400
           YNS++   C + R+ +AN +L+ M     +PD VT  +LI  YCK+      MK+  ++ 
Sbjct: 313 YNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKIS 372

Query: 401 EAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEE 460
           + GL+ +  TY  L+ GFC++ +++IA+EL   M+  G  P   +Y  L+DG C+    E
Sbjct: 373 KRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLE 432

Query: 461 ALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLA 520
             L++ ++     + +D+ +Y  +I   CK  KV+ A  LF  +   G+  + + YT + 
Sbjct: 433 KALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMI 492

Query: 521 YAYWRAG 527
               + G
Sbjct: 493 SGLCKKG 499



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 125/428 (29%), Positives = 212/428 (49%), Gaps = 16/428 (3%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D + +F +M     +P L   +   + +A  +  ++V    KKM   G+  NI+  N++I
Sbjct: 48  DAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLNIMI 107

Query: 208 HA---CCKS----SDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDR 260
           +    CCK+    S + KV KL  E        D  T+NTLI   C +    EA+ +  R
Sbjct: 108 NCFCRCCKTCFAYSVLGKVMKLGYE-------PDTTTFNTLINGLCLESKVSEAVVLVAR 160

Query: 261 MEREGISPDIVTYNSLIHGFCREGRMREARRLFR--DIKGATPNHVTYTTLIDGYCRAND 318
           M   G  P++VTYNS+++G C+ G    A  L R  D +    +  TY+T+ID  CR   
Sbjct: 161 MVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGC 220

Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT 378
           ++ A+ L + M  KG+   +VTYNS++  LCK G+  D  +LL +M  +KI P+ +T N 
Sbjct: 221 IDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNV 280

Query: 379 LINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAG 438
           LI+ + K G    A ++   M+  G+  +  TY +L+ G+C    +  A  +L  M+   
Sbjct: 281 LIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNN 340

Query: 439 FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQ 498
            SP   +++ L+ GYC     +  +KL  +   RGL  +   Y  L++ FC+  K++ A+
Sbjct: 341 CSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAE 400

Query: 499 RLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASY 558
            LF  M   G+L D + Y  L       G+ +   +I +D+ + ++ + + +Y       
Sbjct: 401 ELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGM 460

Query: 559 AKDNEILD 566
            K  ++ D
Sbjct: 461 CKGGKVED 468



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 109/428 (25%), Positives = 216/428 (50%), Gaps = 4/428 (0%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           SVL  ++K+  +PD  +   + L+          + + +  +M  +   P++     ++N
Sbjct: 121 SVLGKVMKLGYEPD--TTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVN 178

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
            + K   T +   + +KM +  V A++  Y+ +I + C+   +D    L  EME K +++
Sbjct: 179 GICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKS 238

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
            L TYN+L+   CK G   + + +   M    I P+++T+N LI  F +EG+++EA  L+
Sbjct: 239 SLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELY 298

Query: 294 RDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
           +++  KG +PN +TY +L+DGYC  N L EA  + ++M      P +VT+ S+++  CK 
Sbjct: 299 KEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKV 358

Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
            R+ +  +L  +++++ +  + VT + L+  +C+ G    A ++   M+  G++ D  TY
Sbjct: 359 KRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTY 418

Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
             L+ G C   +++ A E+   +  +  +     Y+ +++G C     E    L      
Sbjct: 419 GILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPC 478

Query: 472 RGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKA 531
           +G+  +V  Y  +I   CKK  +  A  L   M+ +G   +   Y +L  A+ R G+  A
Sbjct: 479 KGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTA 538

Query: 532 CSDILDDM 539
            + ++++M
Sbjct: 539 SAKLIEEM 546



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 101/391 (25%), Positives = 194/391 (49%), Gaps = 6/391 (1%)

Query: 146 TQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNV 205
           T   L +  +M   N+   +   + +++SL +D   D    ++K+M   G+ +++  YN 
Sbjct: 186 TSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNS 245

Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
           L+   CK+   +   +LL +M  + +  ++ T+N LI ++ K+G   EA  +   M  +G
Sbjct: 246 LVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKG 305

Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEAL 323
           ISP+ +TYNSL+ G+C + R+ EA  +   +     +P+ VT+T+LI GYC+   ++E +
Sbjct: 306 ISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGM 365

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
           +L   ++ +G+    VTY+ +++  C+ G++  A  L  EM    + PD +T   L++  
Sbjct: 366 KLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGL 425

Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY 443
           C  G    A+++   + ++ + LD   Y  +I G CK  +++ A  L   +   G  P+ 
Sbjct: 426 CDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNV 485

Query: 444 CSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNL 503
            +Y+ ++ G C K +      LL +    G   +   Y  LIR   +   +  + +L   
Sbjct: 486 MTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIEE 545

Query: 504 MQGNGILGDS----VIYTSLAYAYWRAGEPK 530
           M+  G   D+    ++   L+ A W   EP+
Sbjct: 546 MKSCGFSADASSIKMVIDMLSSAVWWFKEPR 576


>gi|255547043|ref|XP_002514579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223546183|gb|EEF47685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 840

 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 132/453 (29%), Positives = 233/453 (51%), Gaps = 37/453 (8%)

Query: 126 PDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVW 185
           P+ N    + L+  +  +   ++ L+++ +M  H     + + TVLL SL K R  D+ +
Sbjct: 382 PNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAF 441

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKV----EKL------------------L 223
           K++ +M   G+  ++  Y+ LIH  CK  +V +     EK+                  L
Sbjct: 442 KLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGL 501

Query: 224 CE--------MEF-----KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           CE        M F      ++  D+  YN +I  Y K+G   EA+ +  ++  +GISP I
Sbjct: 502 CEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTI 561

Query: 271 VTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREV 328
           VT+NSL++GFC   ++ +ARRL   IK  G  PN VTYTTL++ YC   +++  L L   
Sbjct: 562 VTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSE 621

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M AK + P  +TY  +++ LCK+ +++++ +LL +M+   + PD V+ NT+I A+CK  D
Sbjct: 622 MKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARD 681

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
              A ++ ++ML   L     TY  LI+GFC   ++  A  LL  + +   + +  +Y+ 
Sbjct: 682 MRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNLLVSLQNRKVNLNKYAYTT 741

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG 508
           ++  +C K + +  +    + V +G  V +  Y A+I R CK+  V  A+  F +M  +G
Sbjct: 742 IIKAHCAKGDVDKAVVYFRQMVEKGFEVSIRDYSAVIGRLCKRCLVTEAKYFFCMMLSDG 801

Query: 509 ILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
           +  D  ++  L  A+ + G   +  ++L +M +
Sbjct: 802 VCPDQDLFEVLLNAFHQCGHLNSEFELLAEMIK 834



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 126/505 (24%), Positives = 235/505 (46%), Gaps = 41/505 (8%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFL-STPSVLNALVKIHDDPDGNSH 131
            ++HS  S   + H+L + K     + +L+++ L +   S PS+   L+      D ++ 
Sbjct: 121 GFQHSRFSRLVVSHVLARKKRLNELRLVLDQMLLHEGSGSAPSLCELLLGSFRSWDSSNV 180

Query: 132 VLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKM 191
           V   L   Y+   M  D L V  +M+  N +  +     LL +L   R ++++W VY ++
Sbjct: 181 VWDMLACAYSRSAMVHDALFVLVKMKDLNFIVSIQTYNSLLYNL---RHSNIMWDVYNEI 237

Query: 192 VQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMH 251
              G   + +  ++++   C+ S          + E K+ +  + ++NT+++ YCK G  
Sbjct: 238 KVSGTPQSEYTSSIVVDGLCRQSRFQDAVLFFQDTEGKEFQPSVVSFNTIMSRYCKLGFV 297

Query: 252 YEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD---------------- 295
             A +    M + G+ PD  +YN LIHG C  G M EA  L  D                
Sbjct: 298 DVAKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNIL 357

Query: 296 ---------------------IKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGV 334
                                IKG  PN VTYT LI G+C+  ++EEAL+L + M + G 
Sbjct: 358 AKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGF 417

Query: 335 YPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMK 394
              +++   +L  LCK  ++  A +L  EM    + PD +T +TLI+  CK G+   A+ 
Sbjct: 418 QLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAIL 477

Query: 395 VKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYC 454
           +  +M    ++ +   + A++ G C+  ++  A+     ++ +  S     Y+ ++DGY 
Sbjct: 478 LYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYI 537

Query: 455 NKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSV 514
            + N    +KL  +   +G+   +  + +L+  FC   K+  A+RL + ++ +G+  ++V
Sbjct: 538 KRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAV 597

Query: 515 IYTSLAYAYWRAGEPKACSDILDDM 539
            YT+L   Y   G  ++  ++L +M
Sbjct: 598 TYTTLMNVYCEEGNMQSLLELLSEM 622



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 109/413 (26%), Positives = 199/413 (48%), Gaps = 2/413 (0%)

Query: 143 LKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHL 202
           L +      +  +M +    P+L   TVL+    +    +   K+YK+M+  G   +I  
Sbjct: 364 LGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIIS 423

Query: 203 YNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRME 262
             VL+ + CKS  VD   KL CEME   +R DL TY+TLI   CK+G   +A+ + ++M 
Sbjct: 424 STVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMC 483

Query: 263 REGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLE 320
              I P+ + + +++ G C +G++ +AR  F  +     + + + Y  +IDGY +  +  
Sbjct: 484 SNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTR 543

Query: 321 EALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLI 380
           EA++L + +  KG+ P +VT+NS++   C   ++  A RLL+ +    + P+ VT  TL+
Sbjct: 544 EAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLM 603

Query: 381 NAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFS 440
           N YC+ G+  S +++ + M    +     TY  +I G CK  ++  + +LL  M   G +
Sbjct: 604 NVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLT 663

Query: 441 PSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRL 500
           P   SY+ ++  +C   +     +L D+ +   L      Y  LI  FC    +  A  L
Sbjct: 664 PDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNL 723

Query: 501 FNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRS 553
              +Q   +  +   YT++  A+   G+          M  +   ++++ Y +
Sbjct: 724 LVSLQNRKVNLNKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKGFEVSIRDYSA 776



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 108/442 (24%), Positives = 209/442 (47%), Gaps = 37/442 (8%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           QD +  F         P + +   +++   K    D+    +  M++ G++ + + YN+L
Sbjct: 263 QDAVLFFQDTEGKEFQPSVVSFNTIMSRYCKLGFVDVAKSFFCMMLKHGLLPDAYSYNIL 322

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           IH  C +  + +   L  +ME   +  D+ TYN L   +   G+   A  +  +M  +G 
Sbjct: 323 IHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNILAKGFRLLGLINGAWNIIQKMLIKGP 382

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI------------------------------ 296
           +P++VTY  LI G C+ G + EA +L++++                              
Sbjct: 383 NPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFK 442

Query: 297 -------KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLC 349
                   G  P+ +TY+TLI G C+  ++++A+ L E M +  + P  + + +IL  LC
Sbjct: 443 LFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLC 502

Query: 350 KEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQF 409
           ++G+I  A    + +    ++ D +  N +I+ Y K G+T  A+K+  ++ E G+     
Sbjct: 503 EKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIV 562

Query: 410 TYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEF 469
           T+ +L++GFC  +++  A+ LL  +   G  P+  +Y+ L++ YC + N ++LL+LL E 
Sbjct: 563 TFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEM 622

Query: 470 VSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEP 529
            ++ +      Y  +I+  CK+ K+  + +L   M   G+  D V Y ++  A+ +A + 
Sbjct: 623 KAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDM 682

Query: 530 KACSDILDDMYRRRLMITLKIY 551
           +    + D M    L  T   Y
Sbjct: 683 RKAFQLYDKMLLHNLEPTSVTY 704



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 116/450 (25%), Positives = 208/450 (46%), Gaps = 24/450 (5%)

Query: 28  KLLNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHI 87
           KL    I+     + I   +L L + C    +  AF  + E      +  L ++ T+IH 
Sbjct: 407 KLYKEMISHGFQLSIISSTVL-LGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHG 465

Query: 88  LTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQ 147
           L K    + A  + EK+      S   + N+L  IH          + L+      K++Q
Sbjct: 466 LCKQGEVQQAILLYEKMC-----SNRIIPNSL--IHG---------AILMGLCEKGKISQ 509

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
             +  FD +   NL   +    ++++   K   T    K+YK++ + G+   I  +N L+
Sbjct: 510 ARM-YFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLM 568

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           +  C +  + +  +LL  ++   +  +  TY TL+ +YC++G     L +   M+ + I 
Sbjct: 569 YGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIG 628

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRL 325
           P  +TY  +I G C++ +++E+ +L  D+   G TP+ V+Y T+I  +C+A D+ +A +L
Sbjct: 629 PTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQL 688

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
            + M    + P  VTYN ++   C  G ++DA+ LL  +  +K+  +     T+I A+C 
Sbjct: 689 YDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNLLVSLQNRKVNLNKYAYTTIIKAHCA 748

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            GD   A+    +M+E G  +    Y A+I   CK   +  AK     ML  G  P    
Sbjct: 749 KGDVDKAVVYFRQMVEKGFEVSIRDYSAVIGRLCKRCLVTEAKYFFCMMLSDGVCPDQDL 808

Query: 446 YSWLVDGY--CNKNNEEALLKLLDEFVSRG 473
           +  L++ +  C   N E   +LL E +  G
Sbjct: 809 FEVLLNAFHQCGHLNSE--FELLAEMIKSG 836



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 90/326 (27%), Positives = 154/326 (47%), Gaps = 4/326 (1%)

Query: 223 LCEM---EFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHG 279
           LCE+    F+   +    ++ L   Y +  M ++AL V  +M+       I TYNSL++ 
Sbjct: 164 LCELLLGSFRSWDSSNVVWDMLACAYSRSAMVHDALFVLVKMKDLNFIVSIQTYNSLLYN 223

Query: 280 FCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVV 339
                 M +     + + G   +  T + ++DG CR +  ++A+   +    K   P VV
Sbjct: 224 LRHSNIMWDVYNEIK-VSGTPQSEYTSSIVVDGLCRQSRFQDAVLFFQDTEGKEFQPSVV 282

Query: 340 TYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRM 399
           ++N+I+ + CK G +  A      M +  + PD  + N LI+  C  G    A+ +KN M
Sbjct: 283 SFNTIMSRYCKLGFVDVAKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDM 342

Query: 400 LEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNE 459
              GL  D  TY  L  GF     ++ A  ++  ML  G +P+  +Y+ L+ G+C   N 
Sbjct: 343 ENHGLEPDMVTYNILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNV 402

Query: 460 EALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
           E  LKL  E +S G  + +     L+   CK  +VD A +LF  M+ NG+  D + Y++L
Sbjct: 403 EEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTL 462

Query: 520 AYAYWRAGEPKACSDILDDMYRRRLM 545
            +   + GE +    + + M   R++
Sbjct: 463 IHGLCKQGEVQQAILLYEKMCSNRII 488


>gi|297823043|ref|XP_002879404.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297325243|gb|EFH55663.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 605

 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 150/505 (29%), Positives = 242/505 (47%), Gaps = 22/505 (4%)

Query: 31  NPNIASSLTSTAIHKVLLNLYNCCHIPSL---SCA-FFKWAESAVPNYKHSLQSHWTMIH 86
           NP++  +L S     VL +       PSL   SC  FFK+      N K  L +  T+ H
Sbjct: 34  NPSLLFNLNSNVTRLVLSD-------PSLATQSCIDFFKFLREFESNLKPDLTAVVTLSH 86

Query: 87  ILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLS-WLVIF------ 139
            L  N+ F   + +L  +    F   P  +  L     D D +      W   F      
Sbjct: 87  RLYSNRRFSEMRLLLNSVVNDGFYERP--VEGLGSAMVDCDISEEKFEFWEKFFDLVFRV 144

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
           Y +  M ++GL+VFD M    L     +C V L +  K R  D+  + +++MV  GV   
Sbjct: 145 YVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEFFRRMVDSGVKIT 204

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
           ++   +++   C+  +V+K +KL+ E   K ++ + +TYNT+I  Y K         +  
Sbjct: 205 VYSLTIVVEGLCRRGEVEKSKKLIKEFSGKGIKPEAYTYNTIINAYLKHRDFSGVEKILK 264

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRAN 317
            M+++G+  + VTY  LI    + G+M +  +LF +++  G   +   YT+LI   CR  
Sbjct: 265 VMKKDGVVYNKVTYTLLIELSVKNGKMNDVEKLFDEMRERGIESDIHVYTSLISWNCRKG 324

Query: 318 DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCN 377
           +++ A  L + +  KG+ P   TY +++  +CK G +  A  L+NEM  K +    V  N
Sbjct: 325 NIKRAFLLFDELTEKGLLPSSHTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFN 384

Query: 378 TLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA 437
           TLIN YC+ G    A  + + M + G   D FT   +   F + K  D AK+ LF M++ 
Sbjct: 385 TLINGYCRKGMIDEASMIYDVMEKKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEG 444

Query: 438 GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYA 497
           G   S  SY+ L+D YC + N E   +L  E  S+ +  +   Y  +I  +CK+ KV  A
Sbjct: 445 GVRLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKEVQPNAITYNVMIYAYCKQGKVKEA 504

Query: 498 QRLFNLMQGNGILGDSVIYTSLAYA 522
           ++L+  M+ NG+  DS  YTSL + 
Sbjct: 505 RKLWANMKANGMDPDSYTYTSLIHG 529



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 35/142 (24%), Positives = 65/142 (45%)

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           L+  Y      ++  ++F +M    + P+     V++ +  K        K++  M   G
Sbjct: 456 LIDVYCKEGNVEEAKRLFVEMSSKEVQPNAITYNVMIYAYCKQGKVKEARKLWANMKANG 515

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
           +  + + Y  LIH  C + +VD+  +L  EM  K +  +  TY  +I+   K G   EA 
Sbjct: 516 MDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAF 575

Query: 256 AVQDRMEREGISPDIVTYNSLI 277
            + D ++R+G + D   Y +LI
Sbjct: 576 GLYDEIKRKGYTIDNKVYTALI 597


>gi|359476104|ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Vitis vinifera]
          Length = 877

 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 142/476 (29%), Positives = 240/476 (50%), Gaps = 10/476 (2%)

Query: 114 SVLNALVKIHDD---PDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTV 170
           S LN   KI +D   P  N    S L+    N    +   +++ QM+++ + P +     
Sbjct: 383 SALNLFNKITEDGLFP--NKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNS 440

Query: 171 LLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKD 230
           LL    K  L +   K++ + V  GV ANI  YN+++   CK   +D+   LL  M  + 
Sbjct: 441 LLRGYLKAPLWEEASKLFDEAVDCGV-ANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQG 499

Query: 231 VRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREAR 290
           +  ++ +YN +I  +C+KG    A +V   M    + P++VTY+ LI G  ++G   +A 
Sbjct: 500 MVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKAL 559

Query: 291 RLFRDIKG--ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
            LF  +      P   T+ T+I+G C+   + EA    +    +G  P  +TYNSI+   
Sbjct: 560 DLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGF 619

Query: 349 CKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ 408
            KEG I  A  +  EM E  ++P+ VT  +LIN +CK      A+K ++ M E GL LD 
Sbjct: 620 IKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDV 679

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
             Y ALI GFCK ++M+ A++L F +L+ G SP+   Y+ ++ G+ + NN EA L    +
Sbjct: 680 TAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKK 739

Query: 469 FVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
            ++  +  D+  Y  LI    K+ ++ +A  L+  M   GI+ D + +  L       G+
Sbjct: 740 MINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQ 799

Query: 529 PKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSH--VVDRGLMSKHI 582
            +    IL++M R+ +  ++ IY +  A Y ++  + + F  H  ++DRGL+   +
Sbjct: 800 LENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDV 855



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 129/519 (24%), Positives = 236/519 (45%), Gaps = 10/519 (1%)

Query: 54  CHI--PSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKS-AQNMLEKIALRDFL 110
           CH+  P  +  +FK AE+    +   + ++  ++HIL ++      A+ +L +    D  
Sbjct: 109 CHVNDPQSALRYFKRAETQR-GFIRGVDAYCVLLHILMRSPETHGHARKLLNRYVSGDSD 167

Query: 111 STPSV-LNALVKIHD--DPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHA 167
            +P V ++ L+      D + +  V ++L+  Y      ++ +  F+ M   +++P +  
Sbjct: 168 PSPVVFVDHLINCAKRFDFELDHRVFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPY 227

Query: 168 CTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEME 227
             +LL +L +  +   +  +Y KMV  G+  +    +V++ AC K   V++ E+   E +
Sbjct: 228 MNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETK 287

Query: 228 FKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMR 287
            + V+ D   Y+ +I   CKK      L + + M+  G  P   T+ S+I     +G M 
Sbjct: 288 ERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMV 347

Query: 288 EARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSIL 345
           EA RL  ++   G   N V  T+L+ GYC   +L+ AL L   +   G++P  VTY+ ++
Sbjct: 348 EALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLI 407

Query: 346 RKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLM 405
              C  G I  A+ L  +M    I P     N+L+  Y K      A K+ +  ++ G+ 
Sbjct: 408 EGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVA 467

Query: 406 LDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKL 465
            + FTY  ++   CK  +MD A  LL  M++ G  P+  SY+ ++ G+C K N +    +
Sbjct: 468 -NIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSV 526

Query: 466 LDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWR 525
             + ++R L  +V  Y  LI    KK   + A  LF+ M    I      + ++     +
Sbjct: 527 FSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCK 586

Query: 526 AGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
            G+     D L +      + +   Y S    + K+  I
Sbjct: 587 VGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNI 625



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 109/399 (27%), Positives = 193/399 (48%), Gaps = 10/399 (2%)

Query: 138 IFYANLKMT--------QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYK 189
           IF  N+ M+         +   + D M    ++P++ +   ++    +    DM   V+ 
Sbjct: 469 IFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFS 528

Query: 190 KMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKG 249
            M+   +  N+  Y++LI    K  D +K   L  +M   ++    FT+NT+I   CK G
Sbjct: 529 DMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVG 588

Query: 250 MHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYT 307
              EA         EG  P  +TYNS++ GF +EG +  A  ++R++   G +PN VTYT
Sbjct: 589 QMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYT 648

Query: 308 TLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEK 367
           +LI+G+C++N ++ AL+ R+ M  KG+   V  Y++++   CK   +  A  L  E+ E 
Sbjct: 649 SLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEV 708

Query: 368 KIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIA 427
            ++P+ +  N++I+ +  + +  +A+    +M+   +  D  TY  LI G  K   +  A
Sbjct: 709 GLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFA 768

Query: 428 KELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRR 487
            +L   ML  G  P   ++  LV+G CNK   E   K+L+E   + +   V +Y  LI  
Sbjct: 769 SDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAG 828

Query: 488 FCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRA 526
           + ++  +  A  L + M   G++ D V Y  L    ++ 
Sbjct: 829 YFREGNLKEAFTLHDEMLDRGLVPDDVTYDILINGKFKG 867



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 93/330 (28%), Positives = 155/330 (46%), Gaps = 4/330 (1%)

Query: 127 DGNSHVLSWLVIFYANLKM--TQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMV 184
           D   +V+++ ++   N K   ++  L +FDQM   N+ P       ++N L K       
Sbjct: 534 DLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEA 593

Query: 185 WKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIAL 244
               K  ++ G + +   YN ++    K  ++D    +  EM    V  ++ TY +LI  
Sbjct: 594 RDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLING 653

Query: 245 YCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPN 302
           +CK      AL  +D M  +G+  D+  Y++LI GFC+   M  A+ LF ++   G +PN
Sbjct: 654 FCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPN 713

Query: 303 HVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLN 362
            + Y ++I G+   N++E AL   + M    +   + TY +++  L KEGR+  A+ L  
Sbjct: 714 RIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYM 773

Query: 363 EMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAK 422
           EM  K I PD +T + L+N  C  G   +A K+   M    +      Y  LI G+ +  
Sbjct: 774 EMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREG 833

Query: 423 EMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
            +  A  L   MLD G  P   +Y  L++G
Sbjct: 834 NLKEAFTLHDEMLDRGLVPDDVTYDILING 863



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 68/242 (28%), Positives = 110/242 (45%), Gaps = 37/242 (15%)

Query: 149 GLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIH 208
            L V+ +M    + P++   T L+N   K    D+  K   +M + G+  ++  Y+ LI 
Sbjct: 628 ALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALID 687

Query: 209 ACCKSSDVDKVEKLLCEM-----------------EFKD------------------VRA 233
             CK  D++  + L  E+                  F+D                  +  
Sbjct: 688 GFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPC 747

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           DL TY TLI    K+G    A  +   M  +GI PDI+T++ L++G C +G++  AR++ 
Sbjct: 748 DLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKIL 807

Query: 294 R--DIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
              D K  TP+ + Y TLI GY R  +L+EA  L + M  +G+ P  VTY+ ++    K 
Sbjct: 808 EEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILINGKFKG 867

Query: 352 GR 353
            R
Sbjct: 868 DR 869



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 87/173 (50%), Gaps = 2/173 (1%)

Query: 107 RDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLH 166
           RD  S   +   L+++   P  N  V + ++  + +L   +  L  + +M    +   L 
Sbjct: 693 RDMESAQDLFFELLEVGLSP--NRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLG 750

Query: 167 ACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEM 226
             T L++ L K+        +Y +M+  G+V +I  ++VL++  C    ++   K+L EM
Sbjct: 751 TYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEM 810

Query: 227 EFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHG 279
           + K++   +  YNTLIA Y ++G   EA  + D M   G+ PD VTY+ LI+G
Sbjct: 811 DRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILING 863


>gi|356526063|ref|XP_003531639.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
           mitochondrial-like isoform 1 [Glycine max]
 gi|356526065|ref|XP_003531640.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
           mitochondrial-like isoform 2 [Glycine max]
          Length = 522

 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 142/474 (29%), Positives = 247/474 (52%), Gaps = 16/474 (3%)

Query: 10  DTKFIKTISAIMLKGHWAKLLNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAES 69
           D  FI      ++  HW KLL   +++SLT   +  +LL L N  H+ SL  +   W   
Sbjct: 41  DLDFICVAHRHVINSHWEKLLP--LSTSLTPFRLKHLLLALQND-HVSSLKLS--TWVLK 95

Query: 70  AVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTP--SVLNALVKIHDDPD 127
             P+  H+L +H  ++H L+K++ FK+ Q  L +       S P  ++ +AL+  +   +
Sbjct: 96  HNPS-SHTLDTHSILLHTLSKHRQFKTTQKFLTQT----LSSHPPHTLFDALLFSYRLCN 150

Query: 128 GNSH-VLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWK 186
            +S  V   L    A+    +    ++  M+ H   P + +C   L+SL + R  D+   
Sbjct: 151 SSSPLVFDSLFKTLAHTNKFRHATHIYTLMKEHGFSPTVQSCNAFLSSLLRLRRADIALA 210

Query: 187 VYKKMVQLGVVA-NIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
            Y+++ +   V+ N++  N++I A C   +V K   +L +M    +  ++ ++NTLI+ Y
Sbjct: 211 FYREIRRRSCVSPNVYTLNMIIRAYCMLGEVQKGFDMLEKMMDMGLSPNVVSFNTLISGY 270

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGAT--PNH 303
           C KG+   AL V+  M   G+ P++VT+N+LI+GFC+E ++ EA R+F ++K A   P+ 
Sbjct: 271 CNKGLFGLALKVKSLMVENGVQPNVVTFNTLINGFCKERKLHEANRVFNEMKVANVDPSV 330

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
           VTY TL++GY +  D E  +R+ E M   G+   ++TYN+++  LCK+G+ + A   + E
Sbjct: 331 VTYNTLLNGYGQVGDSEMGVRVYEEMMRNGLKADILTYNALILGLCKDGKTKKAAGFVRE 390

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
           ++++ + P+  T + LI   C   ++  A  +   M+ +G   +  T++ LI  FCK ++
Sbjct: 391 LDKENLVPNASTFSALITGQCVRNNSERAFLIYRSMVRSGCSPNGQTFQMLISAFCKNED 450

Query: 424 MDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVD 477
            D A ++L  ML    SP   + S L DG C     +  L L  E   R L  D
Sbjct: 451 FDGAVQVLRDMLGRLMSPDLSTMSELCDGLCRCGKNQLALALCSEMEVRRLLPD 504



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 79/283 (27%), Positives = 138/283 (48%), Gaps = 2/283 (0%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N + L+ ++  Y  L   Q G  + ++M    L P++ +   L++      L  +  KV 
Sbjct: 224 NVYTLNMIIRAYCMLGEVQKGFDMLEKMMDMGLSPNVVSFNTLISGYCNKGLFGLALKVK 283

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
             MV+ GV  N+  +N LI+  CK   + +  ++  EM+  +V   + TYNTL+  Y + 
Sbjct: 284 SLMVENGVQPNVVTFNTLINGFCKERKLHEANRVFNEMKVANVDPSVVTYNTLLNGYGQV 343

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTY 306
           G     + V + M R G+  DI+TYN+LI G C++G+ ++A    R++  +   PN  T+
Sbjct: 344 GDSEMGVRVYEEMMRNGLKADILTYNALILGLCKDGKTKKAAGFVRELDKENLVPNASTF 403

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
           + LI G C  N+ E A  +   M   G  P   T+  ++   CK      A ++L +M  
Sbjct: 404 SALITGQCVRNNSERAFLIYRSMVRSGCSPNGQTFQMLISAFCKNEDFDGAVQVLRDMLG 463

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQF 409
           + ++PD  T + L +  C+ G    A+ + + M    L+ D F
Sbjct: 464 RLMSPDLSTMSELCDGLCRCGKNQLALALCSEMEVRRLLPDGF 506



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 70/256 (27%), Positives = 123/256 (48%), Gaps = 3/256 (1%)

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALR 324
           S   + ++SL        + R A  ++  +K  G +P   +    +    R    + AL 
Sbjct: 151 SSSPLVFDSLFKTLAHTNKFRHATHIYTLMKEHGFSPTVQSCNAFLSSLLRLRRADIALA 210

Query: 325 L-REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
             RE+     V P V T N I+R  C  G ++    +L +M +  ++P+ V+ NTLI+ Y
Sbjct: 211 FYREIRRRSCVSPNVYTLNMIIRAYCMLGEVQKGFDMLEKMMDMGLSPNVVSFNTLISGY 270

Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY 443
           C  G    A+KVK+ M+E G+  +  T+  LI+GFCK +++  A  +   M  A   PS 
Sbjct: 271 CNKGLFGLALKVKSLMVENGVQPNVVTFNTLINGFCKERKLHEANRVFNEMKVANVDPSV 330

Query: 444 CSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNL 503
            +Y+ L++GY    + E  +++ +E +  GL  D+  Y ALI   CK  K   A      
Sbjct: 331 VTYNTLLNGYGQVGDSEMGVRVYEEMMRNGLKADILTYNALILGLCKDGKTKKAAGFVRE 390

Query: 504 MQGNGILGDSVIYTSL 519
           +    ++ ++  +++L
Sbjct: 391 LDKENLVPNASTFSAL 406



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 65/294 (22%), Positives = 124/294 (42%), Gaps = 20/294 (6%)

Query: 272 TYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAA 331
           T++ L+H   +  + +  ++       + P H  +  L+  Y   N              
Sbjct: 105 THSILLHTLSKHRQFKTTQKFLTQTLSSHPPHTLFDALLFSYRLCNSSSP---------- 154

Query: 332 KGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKI--GDT 389
                  + ++S+ + L    + R A  +   M E   +P   +CN  +++  ++   D 
Sbjct: 155 -------LVFDSLFKTLAHTNKFRHATHIYTLMKEHGFSPTVQSCNAFLSSLLRLRRADI 207

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
           A A   + R   + +  + +T   +I  +C   E+    ++L  M+D G SP+  S++ L
Sbjct: 208 ALAFYREIRR-RSCVSPNVYTLNMIIRAYCMLGEVQKGFDMLEKMMDMGLSPNVVSFNTL 266

Query: 450 VDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGI 509
           + GYCNK      LK+    V  G+  +V  +  LI  FCK+ K+  A R+FN M+   +
Sbjct: 267 ISGYCNKGLFGLALKVKSLMVENGVQPNVVTFNTLINGFCKERKLHEANRVFNEMKVANV 326

Query: 510 LGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNE 563
               V Y +L   Y + G+ +    + ++M R  L   +  Y +      KD +
Sbjct: 327 DPSVVTYNTLLNGYGQVGDSEMGVRVYEEMMRNGLKADILTYNALILGLCKDGK 380


>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
          Length = 671

 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 160/600 (26%), Positives = 272/600 (45%), Gaps = 70/600 (11%)

Query: 9   SDTKFIKTISAIMLKGHWAKLLNPNIASSLTSTAIHK------VLLNLYNCCHIPSLSCA 62
           S   F K +++I    H + LL+  ++  + S  I        +L+N +  CH+  +  A
Sbjct: 60  STVDFNKLLTSIAKMKHHSTLLS--LSHQMDSFGIPPNIYTLHILINSF--CHLNRVGFA 115

Query: 63  FFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKI---ALR-DFLSTPSVLNA 118
           F   A+     ++    +  T+I  +        A ++ +K+     R D ++  +++N 
Sbjct: 116 FSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLING 175

Query: 119 LVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKD 178
           L K+     GN                T   +++   M   N  P++ A   +++SL KD
Sbjct: 176 LCKV-----GN----------------TSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKD 214

Query: 179 RLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTY 238
           R     + ++ +MV  G+  +I  YN LIHA C   +   V  LL EM    +  D+ ++
Sbjct: 215 RQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSF 274

Query: 239 NTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI-- 296
           NT++   CK+G   EA  V D+M + G+ P++VTY +L+ G C    M EA ++F  +  
Sbjct: 275 NTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVC 334

Query: 297 KGATPNHVTYTTLIDGYCRAN-------------------DLEEALRLREVMAAKGVYPG 337
           KG  PN ++Y TLI+GYC+                     +++EA+++ + M  KG  P 
Sbjct: 335 KGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPN 394

Query: 338 VVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKN 397
           V++YN+++   CK  RI  A  L  EM  +++ PD VT +TLI+  C +     A+ + +
Sbjct: 395 VISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFH 454

Query: 398 RMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKN 457
            M+    + +  TY+ L+   CK + +  A  LL  +  +   P     +  +DG C   
Sbjct: 455 EMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAG 514

Query: 458 NEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYT 517
             EA   L     S+GL  DV  Y  +I   C++  +D A +LF  M  NG   +  IY 
Sbjct: 515 ELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYN 574

Query: 518 SLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGL 577
           ++   + R  E      +L +M          + R FSA    D   + LF   + D GL
Sbjct: 575 TITRGFLRNNETSRAIQLLQEM----------VARGFSA----DASTMTLFVKMLSDDGL 620



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 115/452 (25%), Positives = 197/452 (43%), Gaps = 39/452 (8%)

Query: 54  CHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALR----DF 109
           C + + S A          N + ++ ++ T+I  L K++    A N+  ++  +    D 
Sbjct: 177 CKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDI 236

Query: 110 LSTPSVLNALVKI----HDDPDGNSHVLSWLVIFYANLKMTQDGL----------QVFDQ 155
            +  S+++AL  +    H     N  V S ++    +     D L           V D+
Sbjct: 237 FTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDK 296

Query: 156 MRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSD 215
           M    + P++   T L++        D   KV+  MV  G + N+  YN LI+  CK   
Sbjct: 297 MIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQR 356

Query: 216 VDKV-------------------EKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALA 256
           +DK                     K+   M  K    ++ +YNTLI  YCK     +A+ 
Sbjct: 357 IDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMY 416

Query: 257 VQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGAT--PNHVTYTTLIDGYC 314
           +   M R+ + PD VTY++LIHG C   R+++A  LF ++   +  PN VTY  L+D  C
Sbjct: 417 LFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLC 476

Query: 315 RANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNV 374
           +   L EA+ L + +    + P +   N  +  +C+ G +  A  L + ++ K + PD  
Sbjct: 477 KNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVW 536

Query: 375 TCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGM 434
           T + +IN  C+ G    A K+   M E G  L+   Y  +  GF +  E   A +LL  M
Sbjct: 537 TYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEM 596

Query: 435 LDAGFSPSYCSYSWLVDGYCNKNNEEALLKLL 466
           +  GFS    + +  V    +   +++L ++L
Sbjct: 597 VARGFSADASTMTLFVKMLSDDGLDQSLKQIL 628



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 87/326 (26%), Positives = 147/326 (45%), Gaps = 12/326 (3%)

Query: 248 KGMHYE----ALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR-----DIKG 298
           K +H+     A++  +RM R    P  V +N L+       +M+    L       D  G
Sbjct: 35  KSLHFNTIDGAISSFNRMLRMQPPPSTVDFNKLLTSI---AKMKHHSTLLSLSHQMDSFG 91

Query: 299 ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDAN 358
             PN  T   LI+ +C  N +  A  +   +   G  P   T+ +++R +C EG+I +A 
Sbjct: 92  IPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEAL 151

Query: 359 RLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGF 418
            L ++M  +   PD VT  TLIN  CK+G+T++A+++   M++     + F Y  +I   
Sbjct: 152 HLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSL 211

Query: 419 CKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDV 478
           CK +++  A  L   M+  G SP   +Y+ L+   CN    + +  LL+E V   +  DV
Sbjct: 212 CKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDV 271

Query: 479 SVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDD 538
             +  ++   CK+ KV  A  + + M   G+  + V YT+L   +    E      + D 
Sbjct: 272 VSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDT 331

Query: 539 MYRRRLMITLKIYRSFSASYAKDNEI 564
           M  +  M  +  Y +    Y K   I
Sbjct: 332 MVCKGCMPNVISYNTLINGYCKIQRI 357



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 62/231 (26%), Positives = 105/231 (45%)

Query: 336 PGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKV 395
           P  V +N +L  + K         L ++M+   I P+  T + LIN++C +     A  V
Sbjct: 59  PSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSV 118

Query: 396 KNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCN 455
             ++L+ G   D  T+  LI G C   ++  A  L   M+  GF P   +Y  L++G C 
Sbjct: 119 LAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCK 178

Query: 456 KNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVI 515
             N  A ++LL   V +    +V  Y  +I   CK  +V  A  LF+ M   GI  D   
Sbjct: 179 VGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFT 238

Query: 516 YTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
           Y SL +A     E K  + +L++M   ++M  +  + +   +  K+ ++ +
Sbjct: 239 YNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTE 289


>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
 gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
          Length = 841

 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 135/468 (28%), Positives = 231/468 (49%), Gaps = 40/468 (8%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           L++FD+M  + + P+     V++    K+   D  +++Y +M    +   +   N LI  
Sbjct: 349 LELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRG 408

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
             K+   ++  KL  E     + A++FTYN+L++  CK+G   EA ++ ++M R+G+ P 
Sbjct: 409 YLKARSPEEASKLFDEAVACGI-ANVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPS 467

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLRE 327
           +V+YN++I G C++G M  A  +F ++  KG  PN +TY+ L+DGY +  D E A  L +
Sbjct: 468 VVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYD 527

Query: 328 VMAAK-----------------------------------GVYPGVVTYNSILRKLCKEG 352
            M  +                                   G  P  +TYN I+    KEG
Sbjct: 528 RMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEG 587

Query: 353 RIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYK 412
            +  A  +  EM +  ++P+  T   LIN +CK  +   A+KV + M   G+ LD   Y 
Sbjct: 588 SVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYC 647

Query: 413 ALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSR 472
           ALI GFC+  +M  A +LL  + + G SP+   YS ++ G+    N EA L L    ++ 
Sbjct: 648 ALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINE 707

Query: 473 GLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKAC 532
           G+  D+ +Y  LI    K+ K+ +A  L+  M   GI+ D + Y+ L +     G+ +  
Sbjct: 708 GIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENA 767

Query: 533 SDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSH--VVDRGLM 578
             IL+DM R+ +  T+ IY +    + K+  + + F  H  ++D+GL+
Sbjct: 768 QKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGLV 815



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 124/418 (29%), Positives = 222/418 (53%), Gaps = 5/418 (1%)

Query: 169 TVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEF 228
           T L+    K    D   +++ KM + G+  N   Y V+I  CCK+ ++DK  ++  +M+ 
Sbjct: 333 TTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKN 392

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
           KD+   +F  N+LI  Y K     EA  + D     GI+ ++ TYNSL+   C+EG+M E
Sbjct: 393 KDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGIA-NVFTYNSLLSWLCKEGKMSE 451

Query: 289 ARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILR 346
           A  ++  +  KG  P+ V+Y  +I G+C+  D++ A  +   M  KG+ P ++TY+ ++ 
Sbjct: 452 ACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMD 511

Query: 347 KLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLML 406
              K+G    A  L + M  + IAP + TCN +IN  CK G T+ +     ++++ G + 
Sbjct: 512 GYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIP 571

Query: 407 DQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLL 466
              TY  +I GF K   ++ A  +   M   G SP+  +Y+ L++G+C  NN +  LK++
Sbjct: 572 TCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVM 631

Query: 467 DEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRA 526
           DE  ++G+ +DV+VY ALI  FC+K  +  A +L + +Q  G+  + V+Y+S+   + + 
Sbjct: 632 DEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKL 691

Query: 527 GEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEIL--DLFWSHVVDRGLMSKHI 582
              +A   +   M    +   L+IY +  +   K+ ++L     ++ ++ +G+M   I
Sbjct: 692 QNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLI 749



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 146/535 (27%), Positives = 245/535 (45%), Gaps = 11/535 (2%)

Query: 36  SSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHF- 94
           S LT T     LLN  N    P  + ++F WA S       S+ +   ++HILTK+    
Sbjct: 60  SFLTQTQYIDTLLNHQN---DPQSALSYFTWA-SQKRGLIKSVDALCVLLHILTKSTETC 115

Query: 95  KSAQNMLEKIALRDFLSTPSVLNA-LVKIHD--DPDGNSHVLSWLVIFYANLKMTQDGLQ 151
             A+N+L + A  D+   PSV+ A L++     D + +S V ++L+  Y   K   D + 
Sbjct: 116 GKARNLLNRFASDDWGPVPSVVVARLIESSRRLDFESDSRVFNYLLNSYVKTKRINDAVD 175

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
            F+ +   +++P L    + L+ L K+ +      VY KM   GV  +    +V+I A  
Sbjct: 176 CFNSLIEKDIVPCLTVMNIFLSELVKNNMIREARDVYNKMASKGVKGDCATISVMIRASM 235

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           +   +++ E    E + K V  D   Y+ +I   CKK     AL +   M  +G  P  V
Sbjct: 236 REGKLEEAEGWFREAKNKGVELDARAYSIVIEAVCKKPDSVAALGLLREMRDKGWVPHEV 295

Query: 272 TYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
            +  +I    ++G+M EA ++  ++   G   N V  TTL+ GYC+  DL+ AL L + M
Sbjct: 296 IFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKM 355

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
              G+ P  VTY  I+   CK G +  A  + N+M  K I+P     N+LI  Y K    
Sbjct: 356 NENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSP 415

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
             A K+ +  +  G+  + FTY +L+   CK  +M  A  +   M+  G  PS  SY+ +
Sbjct: 416 EEASKLFDEAVACGIA-NVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNM 474

Query: 450 VDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGI 509
           + G+C + + ++   +  E + +GL  ++  Y  L+  + KK   +YA  L++ M+G  I
Sbjct: 475 ILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENI 534

Query: 510 LGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
                    +     +AG      D L  + +   + T   Y      + K+  +
Sbjct: 535 APSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSV 589



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 119/429 (27%), Positives = 209/429 (48%), Gaps = 38/429 (8%)

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           L+  Y   +  ++  ++FD+  V   + ++     LL+ L K+        +++KMV+ G
Sbjct: 405 LIRGYLKARSPEEASKLFDEA-VACGIANVFTYNSLLSWLCKEGKMSEACSIWEKMVRKG 463

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
           V  ++  YN +I   C+  D+D    +  EM  K ++ +L TY+ L+  Y KKG    A 
Sbjct: 464 VRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAF 523

Query: 256 AVQDRMEREGISPDIVTYNSLIHGFCREGRMREAR-RLFRDIK----------------- 297
            + DRM  E I+P   T N +I+G C+ GR  E++ RL + ++                 
Sbjct: 524 GLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGF 583

Query: 298 -------------------GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGV 338
                              G +PN  TYT LI+G+C++N+++ AL++ + M  KG+   V
Sbjct: 584 VKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDV 643

Query: 339 VTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNR 398
             Y +++   C++G + +A++LL+E+ E  ++P+ V  +++I+ + K+ +  +A+ +  R
Sbjct: 644 TVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKR 703

Query: 399 MLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNN 458
           M+  G+  D   Y  LI G  K  ++  A EL   ML  G  P   +YS L+ G CNK  
Sbjct: 704 MINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQ 763

Query: 459 EEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTS 518
            E   K+L++   + +   V +Y  LI    K+  +  A RL N M   G++ D   Y  
Sbjct: 764 LENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGLVPDDTTYDI 823

Query: 519 LAYAYWRAG 527
           L     + G
Sbjct: 824 LVNGKVKDG 832



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 102/315 (32%), Positives = 154/315 (48%), Gaps = 2/315 (0%)

Query: 146 TQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNV 205
           T+    ++D+MR  N+ P    C +++N L K   T       KK+VQ G +     YN 
Sbjct: 519 TEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNC 578

Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
           +I    K   V+    +  EM    V  ++FTY  LI  +CK      AL V D M+ +G
Sbjct: 579 IIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKG 638

Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEAL 323
           I  D+  Y +LI GFCR+G M  A +L  +++  G +PN V Y+++I G+ +  ++E AL
Sbjct: 639 IELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAAL 698

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
            L + M  +G+   +  Y +++  L KEG++  A+ L  EM  K I PD +T + LI+  
Sbjct: 699 HLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGL 758

Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY 443
           C  G   +A K+   M    +    F Y  LI G  K   +  A  L   MLD G  P  
Sbjct: 759 CNKGQLENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGLVPDD 818

Query: 444 CSYSWLVDGYCNKNN 458
            +Y  LV+G     N
Sbjct: 819 TTYDILVNGKVKDGN 833



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 88/311 (28%), Positives = 149/311 (47%), Gaps = 19/311 (6%)

Query: 84  MIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANL 143
           +I+ L K      +Q+ L+K+    F+ T    N ++      DG           +   
Sbjct: 544 IINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCII------DG-----------FVKE 586

Query: 144 KMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLY 203
                 L V+ +M    + P++   T L+N   K    D+  KV  +M   G+  ++ +Y
Sbjct: 587 GSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVY 646

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER 263
             LI   C+  D+    +LL E++   +  +   Y+++I+ + K      AL +  RM  
Sbjct: 647 CALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMIN 706

Query: 264 EGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEE 321
           EGI  D+  Y +LI G  +EG++  A  L+ ++  KG  P+ +TY+ LI G C    LE 
Sbjct: 707 EGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLEN 766

Query: 322 ALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
           A ++ E M  K + P V  YN+++    KEG +++A RL NEM +K + PD+ T + L+N
Sbjct: 767 AQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGLVPDDTTYDILVN 826

Query: 382 AYCKIGDTASA 392
              K G+  S 
Sbjct: 827 GKVKDGNLFSG 837


>gi|449474629|ref|XP_004154237.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g11710, mitochondrial-like [Cucumis sativus]
          Length = 644

 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 152/530 (28%), Positives = 265/530 (50%), Gaps = 21/530 (3%)

Query: 4   LVALNSDTKFIKTISAIMLKGHWAKLLNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAF 63
           L++ +++    K I   + +  W  L    ++ SLT++ + +V+    N    P L+  F
Sbjct: 24  LLSPSTEDIICKAICVNLKQRRWKFL--EQLSPSLTNSLVCRVIREFRNS---PQLALEF 78

Query: 64  FKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIH 123
           + W E A  N+ HSL+S  T++H+L  +++F  A +++E + L +  S   VL  L+  +
Sbjct: 79  YNWVE-ARDNFSHSLESRCTLVHVLVNSRNFNDALSIMESLILXNGKSPLEVLGGLMNSY 137

Query: 124 DDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDM 183
           +  + N  V   LV     L+  +    V  ++R+      +HA    LN L K   TD 
Sbjct: 138 EICNSNPAVFXALVRTCTQLRSVEGAYDVIRKLRLEGFWVTIHAWNNFLNLLLKLGETDK 197

Query: 184 VWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIA 243
              +YK+M+  G   N++ +N++I+A C    + +   ++  M   ++  ++  +N +I 
Sbjct: 198 FXNMYKEMIASGYSENVNTFNLIIYALCNECKLLEAIYVVYLMLKIEIWPNVVXFNMIID 257

Query: 244 LYCKKGMHYEALAVQDRME---REGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--G 298
              K G    AL +   +E      +SP+IV YN +I+GFC+  R+  A+ +  ++   G
Sbjct: 258 KANKMGEMDLALKLTRNIEVISGGSVSPNIVAYNCIINGFCKIRRLESAKNVLGEMIKLG 317

Query: 299 ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDAN 358
              N  TY TLIDGY R   L+ A RL + M    + P    YNS++  L  EG + +A+
Sbjct: 318 IDFNERTYATLIDGYARKGSLDVAFRLCDEMVEMRLIPDTFVYNSLIYWLYMEGELEEAS 377

Query: 359 RLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGF 418
            LL++M  ++I PD  T + L    C  G    A++V   ++E  L+ D FTY  LI+  
Sbjct: 378 FLLSDMINRRILPDEFTYSILTKGLCVSGHLNKALRVHYYIVERSLVRDAFTYNILINYM 437

Query: 419 CKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDV 478
            +++ +  AK+LL  M+  G  P   +Y   VDG+C +   EA +++ D+ V        
Sbjct: 438 FQSRNIAGAKQLLSSMIVGGIKPDMVTYGTPVDGHCKEGKIEAAVQIYDKAV-------- 489

Query: 479 SVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
            VY +++   CK+  +  A+ L + +Q NG L D V Y +L + +   GE
Sbjct: 490 -VYNSILDGLCKQGSIYAAKLLVDKLQQNGFL-DPVTYNTLLHGFCVNGE 537



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 86/327 (26%), Positives = 159/327 (48%), Gaps = 13/327 (3%)

Query: 171 LLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKD 230
           L++  A+    D+ +++  +MV++ ++ +  +YN LI+      ++++   LL +M  + 
Sbjct: 328 LIDGYARKGSLDVAFRLCDEMVEMRLIPDTFVYNSLIYWLYMEGELEEASFLLSDMINRR 387

Query: 231 VRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREAR 290
           +  D FTY+ L    C  G   +AL V   +    +  D  TYN LI+   +   +  A+
Sbjct: 388 ILPDEFTYSILTKGLCVSGHLNKALRVHYYIVERSLVRDAFTYNILINYMFQSRNIAGAK 447

Query: 291 RLFRD--IKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
           +L     + G  P+ VTY T +DG+C+   +E A++         +Y   V YNSIL  L
Sbjct: 448 QLLSSMIVGGIKPDMVTYGTPVDGHCKEGKIEAAVQ---------IYDKAVVYNSILDGL 498

Query: 349 CKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ 408
           CK+G I  A  L++++ +     D VT NTL++ +C  G+   A  +   M+  G +++ 
Sbjct: 499 CKQGSIYAAKLLVDKLQQNGFL-DPVTYNTLLHGFCVNGEIEKAFALFLEMINVGSLVNI 557

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
            +Y  +I+  CK   +  A EL+  M   G  P   +Y+ L+  +      E +++L   
Sbjct: 558 VSYNIMINFLCKMGLIQQAMELMRAMSSQGIIPDLITYTTLITNFVETCGSEDVIELHGY 617

Query: 469 FVSRGLCVDVSVYRALIRRFCKKEKVD 495
            + +G   D   YR+ +   C +E  +
Sbjct: 618 MMLKGAVPDRKTYRSFVSP-CLQEHTE 643



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 67/256 (26%), Positives = 129/256 (50%), Gaps = 10/256 (3%)

Query: 161 LMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVE 220
           ++P     ++L   L      +   +V+  +V+  +V +   YN+LI+   +S ++   +
Sbjct: 388 ILPDEFTYSILTKGLCVSGHLNKALRVHYYIVERSLVRDAFTYNILINYMFQSRNIAGAK 447

Query: 221 KLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGF 280
           +LL  M    ++ D+ TY T +  +CK+G    A+ + D+          V YNS++ G 
Sbjct: 448 QLLSSMIVGGIKPDMVTYGTPVDGHCKEGKIEAAVQIYDKA---------VVYNSILDGL 498

Query: 281 CREGRMREARRLFRDIK-GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVV 339
           C++G +  A+ L   ++     + VTY TL+ G+C   ++E+A  L   M   G    +V
Sbjct: 499 CKQGSIYAAKLLVDKLQQNGFLDPVTYNTLLHGFCVNGEIEKAFALFLEMINVGSLVNIV 558

Query: 340 TYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRM 399
           +YN ++  LCK G I+ A  L+  M+ + I PD +T  TLI  + +   +   +++   M
Sbjct: 559 SYNIMINFLCKMGLIQQAMELMRAMSSQGIIPDLITYTTLITNFVETCGSEDVIELHGYM 618

Query: 400 LEAGLMLDQFTYKALI 415
           +  G + D+ TY++ +
Sbjct: 619 MLKGAVPDRKTYRSFV 634



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 88/354 (24%), Positives = 151/354 (42%), Gaps = 10/354 (2%)

Query: 106 LRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHL 165
           +R   S  +VL  ++K+    D N    + L+  YA         ++ D+M    L+P  
Sbjct: 300 IRRLESAKNVLGEMIKL--GIDFNERTYATLIDGYARKGSLDVAFRLCDEMVEMRLIPDT 357

Query: 166 HACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCE 225
                L+  L  +   +    +   M+   ++ +   Y++L    C S  ++K  ++   
Sbjct: 358 FVYNSLIYWLYMEGELEEASFLLSDMINRRILPDEFTYSILTKGLCVSGHLNKALRVHYY 417

Query: 226 MEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGR 285
           +  + +  D FTYN LI    +      A  +   M   GI PD+VTY + + G C+EG+
Sbjct: 418 IVERSLVRDAFTYNILINYMFQSRNIAGAKQLLSSMIVGGIKPDMVTYGTPVDGHCKEGK 477

Query: 286 MREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSIL 345
           +  A +++          V Y +++DG C+   +  A  L + +   G +   VTYN++L
Sbjct: 478 IEAAVQIY-------DKAVVYNSILDGLCKQGSIYAAKLLVDKLQQNG-FLDPVTYNTLL 529

Query: 346 RKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLM 405
              C  G I  A  L  EM       + V+ N +IN  CK+G    AM++   M   G++
Sbjct: 530 HGFCVNGEIEKAFALFLEMINVGSLVNIVSYNIMINFLCKMGLIQQAMELMRAMSSQGII 589

Query: 406 LDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNE 459
            D  TY  LI  F +    +   EL   M+  G  P   +Y   V     ++ E
Sbjct: 590 PDLITYTTLITNFVETCGSEDVIELHGYMMLKGAVPDRKTYRSFVSPCLQEHTE 643



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 68/278 (24%), Positives = 113/278 (40%), Gaps = 38/278 (13%)

Query: 298 GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDA 357
           G + N  T+  +I   C    L EA+ +  +M    ++P VV +N I+ K  K G +  A
Sbjct: 209 GYSENVNTFNLIIYALCNECKLLEAIYVVYLMLKIEIWPNVVXFNMIIDKANKMGEMDLA 268

Query: 358 NRL---LNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKAL 414
            +L   +  ++   ++P+ V  N +IN +CKI    SA  V   M++ G+  ++ TY  L
Sbjct: 269 LKLTRNIEVISGGSVSPNIVAYNCIINGFCKIRRLESAKNVLGEMIKLGIDFNERTYATL 328

Query: 415 IHGFCKAKEMDIAKE-----------------------------------LLFGMLDAGF 439
           I G+ +   +D+A                                     LL  M++   
Sbjct: 329 IDGYARKGSLDVAFRLCDEMVEMRLIPDTFVYNSLIYWLYMEGELEEASFLLSDMINRRI 388

Query: 440 SPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQR 499
            P   +YS L  G C   +    L++    V R L  D   Y  LI    +   +  A++
Sbjct: 389 LPDEFTYSILTKGLCVSGHLNKALRVHYYIVERSLVRDAFTYNILINYMFQSRNIAGAKQ 448

Query: 500 LFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILD 537
           L + M   GI  D V Y +    + + G+ +A   I D
Sbjct: 449 LLSSMIVGGIKPDMVTYGTPVDGHCKEGKIEAAVQIYD 486



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 54/217 (24%), Positives = 98/217 (45%), Gaps = 32/217 (14%)

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M A G    V T+N I+  LC E ++ +A  ++  M + +I P+ V  N +I+   K+G+
Sbjct: 205 MIASGYSENVNTFNLIIYALCNECKLLEAIYVVYLMLKIEIWPNVVXFNMIIDKANKMGE 264

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
              A+K+   +                             E++ G      SP+  +Y+ 
Sbjct: 265 MDLALKLTRNI-----------------------------EVISG---GSVSPNIVAYNC 292

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG 508
           +++G+C     E+   +L E +  G+  +   Y  LI  + +K  +D A RL + M    
Sbjct: 293 IINGFCKIRRLESAKNVLGEMIKLGIDFNERTYATLIDGYARKGSLDVAFRLCDEMVEMR 352

Query: 509 ILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
           ++ D+ +Y SL Y  +  GE +  S +L DM  RR++
Sbjct: 353 LIPDTFVYNSLIYWLYMEGELEEASFLLSDMINRRIL 389


>gi|229914885|gb|ACQ90610.1| putative PPR repeat protein [Eutrema halophilum]
          Length = 1023

 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 135/460 (29%), Positives = 227/460 (49%), Gaps = 38/460 (8%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIAL-RDFLSTPSVLNALVKIHDDPDGNSH 131
            +KH+++S+  + HIL   + +  A  +L ++ L +  L    V + L    +       
Sbjct: 5   GFKHTIESYCIVAHILFCARMYYDANRILREMVLSKAELKDCDVFDVLWSTRNVCVPGFG 64

Query: 132 VLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKM 191
           V   L        M ++ LQ F +M+   + P   +C  LL+  A+   TD + + +K M
Sbjct: 65  VFDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMKRFFKDM 124

Query: 192 VQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMH 251
           +  G    +  YN++I   CK  D++    L  EM+F+ +  D  TYN++I  Y K G  
Sbjct: 125 IGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRL 184

Query: 252 YEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTL 309
            + +   + M+     PD++TYN+LI+ FC+ G++ +    FR++K  G  PN V+Y+TL
Sbjct: 185 DDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYSTL 244

Query: 310 IDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI 369
           +D +C+ + +++AL+    M   G+ P   TY S++   CK G + DA RL +EM++  +
Sbjct: 245 VDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGV 304

Query: 370 APDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKE 429
             + VT   LI+  C +     A ++  +M+ AG++ +  +Y ALIHGF KAK MD A E
Sbjct: 305 EWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALE 364

Query: 430 LLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFC 489
           L                                   LDE   RG+  D+ +Y   I   C
Sbjct: 365 L-----------------------------------LDEMKGRGIKPDLLLYGTFIWSLC 389

Query: 490 KKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEP 529
             EK++ A+ + N MQ  GI  ++ IYT+L  AY+++  P
Sbjct: 390 GLEKIEAAKVVMNEMQEKGIKANTFIYTTLMDAYFKSENP 429



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 102/319 (31%), Positives = 157/319 (49%), Gaps = 2/319 (0%)

Query: 238 YNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK 297
           ++ L ++  ++ M  EAL    +M+R  + P   + N L+H F R G+    +R F+D+ 
Sbjct: 66  FDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMKRFFKDMI 125

Query: 298 GA--TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIR 355
           GA   P   TY  +ID  C+  D+E A  L E M  +G+ P  VTYNS++    K GR+ 
Sbjct: 126 GAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLD 185

Query: 356 DANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALI 415
           D      EM      PD +T NTLIN +CK G     ++    M ++GL  +  +Y  L+
Sbjct: 186 DTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYSTLV 245

Query: 416 HGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLC 475
             FCK   M  A +    M   G  P+  +Y+ LVD YC   N     +L DE    G+ 
Sbjct: 246 DAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVE 305

Query: 476 VDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDI 535
            +V  Y ALI   C  E++  A+ LF  M   G++ +   YT+L + + +A       ++
Sbjct: 306 WNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALEL 365

Query: 536 LDDMYRRRLMITLKIYRSF 554
           LD+M  R +   L +Y +F
Sbjct: 366 LDEMKGRGIKPDLLLYGTF 384



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 68/279 (24%), Positives = 124/279 (44%), Gaps = 3/279 (1%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N H  + LV  Y  +    D  ++ D+M    +  ++   T L++ L          +++
Sbjct: 272 NEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGLCDVERIKEAEELF 331

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
            KMV  GV+ N+  Y  LIH   K+ ++D+  +LL EM+ + ++ DL  Y T I   C  
Sbjct: 332 GKMVTAGVIPNLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTFIWSLCGL 391

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCRE--GRMREARRLFRDIKGATPNHVTY 306
                A  V + M+ +GI  +   Y +L+  + +                       VT+
Sbjct: 392 EKIEAAKVVMNEMQEKGIKANTFIYTTLMDAYFKSENPSEGLHLLEEMLELDIEVTAVTF 451

Query: 307 TTLIDGYCRANDLEEALR-LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMN 365
             LIDG C+   + +A+     +    G+      Y +++  LCKE ++  A  L  +M 
Sbjct: 452 CVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKEDQVEAATTLFEQMA 511

Query: 366 EKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGL 404
           +K + PD     +LI+   K G+   A+ ++++M E G+
Sbjct: 512 QKGLVPDRTAYTSLIDGKLKQGNVVQALALRDKMAEIGV 550



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 58/233 (24%), Positives = 101/233 (43%)

Query: 336 PGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKV 395
           PG   ++++   L +E    +A +  ++M   ++ P   +CN L++ + ++G T    + 
Sbjct: 61  PGFGVFDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMKRF 120

Query: 396 KNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCN 455
              M+ AG     FTY  +I   CK  +++ A  L   M   G  P   +Y+ ++DGY  
Sbjct: 121 FKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGK 180

Query: 456 KNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVI 515
               +  +   +E  S     DV  Y  LI  FCK  K+      F  M+ +G+  + V 
Sbjct: 181 VGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVS 240

Query: 516 YTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLF 568
           Y++L  A+ +    +       DM R  L+     Y S   +Y K   + D F
Sbjct: 241 YSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAF 293



 Score = 82.0 bits (201), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 57/251 (22%), Positives = 111/251 (44%), Gaps = 45/251 (17%)

Query: 133 LSWLVIFYA-------NLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVW 185
           + W V+ Y        +++  ++  ++F +M    ++P+L + T L++   K +  D   
Sbjct: 304 VEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRAL 363

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
           ++  +M   G+  ++ LY   I + C    ++  + ++ EM+ K ++A+ F Y TL+  Y
Sbjct: 364 ELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLMDAY 423

Query: 246 -----------------------------------CKKGMHYEALAVQDRMERE-GISPD 269
                                              CK  +  +A+    R+  + G+  +
Sbjct: 424 FKSENPSEGLHLLEEMLELDIEVTAVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQAN 483

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLRE 327
              Y ++I G C+E ++  A  LF  +  KG  P+   YT+LIDG  +  ++ +AL LR+
Sbjct: 484 AAIYTAMIDGLCKEDQVEAATTLFEQMAQKGLVPDRTAYTSLIDGKLKQGNVVQALALRD 543

Query: 328 VMAAKGVYPGV 338
            MA  GV  G 
Sbjct: 544 KMAEIGVESGA 554


>gi|296081998|emb|CBI21003.3| unnamed protein product [Vitis vinifera]
          Length = 837

 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 142/476 (29%), Positives = 240/476 (50%), Gaps = 10/476 (2%)

Query: 114 SVLNALVKIHDD---PDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTV 170
           S LN   KI +D   P  N    S L+    N    +   +++ QM+++ + P +     
Sbjct: 343 SALNLFNKITEDGLFP--NKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNS 400

Query: 171 LLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKD 230
           LL    K  L +   K++ + V  GV ANI  YN+++   CK   +D+   LL  M  + 
Sbjct: 401 LLRGYLKAPLWEEASKLFDEAVDCGV-ANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQG 459

Query: 231 VRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREAR 290
           +  ++ +YN +I  +C+KG    A +V   M    + P++VTY+ LI G  ++G   +A 
Sbjct: 460 MVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKAL 519

Query: 291 RLFRDIKG--ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
            LF  +      P   T+ T+I+G C+   + EA    +    +G  P  +TYNSI+   
Sbjct: 520 DLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGF 579

Query: 349 CKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ 408
            KEG I  A  +  EM E  ++P+ VT  +LIN +CK      A+K ++ M E GL LD 
Sbjct: 580 IKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDV 639

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
             Y ALI GFCK ++M+ A++L F +L+ G SP+   Y+ ++ G+ + NN EA L    +
Sbjct: 640 TAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKK 699

Query: 469 FVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
            ++  +  D+  Y  LI    K+ ++ +A  L+  M   GI+ D + +  L       G+
Sbjct: 700 MINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQ 759

Query: 529 PKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSH--VVDRGLMSKHI 582
            +    IL++M R+ +  ++ IY +  A Y ++  + + F  H  ++DRGL+   +
Sbjct: 760 LENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDV 815



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 129/519 (24%), Positives = 236/519 (45%), Gaps = 10/519 (1%)

Query: 54  CHI--PSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKS-AQNMLEKIALRDFL 110
           CH+  P  +  +FK AE+    +   + ++  ++HIL ++      A+ +L +    D  
Sbjct: 69  CHVNDPQSALRYFKRAETQR-GFIRGVDAYCVLLHILMRSPETHGHARKLLNRYVSGDSD 127

Query: 111 STPSV-LNALVKIHD--DPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHA 167
            +P V ++ L+      D + +  V ++L+  Y      ++ +  F+ M   +++P +  
Sbjct: 128 PSPVVFVDHLINCAKRFDFELDHRVFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPY 187

Query: 168 CTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEME 227
             +LL +L +  +   +  +Y KMV  G+  +    +V++ AC K   V++ E+   E +
Sbjct: 188 MNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETK 247

Query: 228 FKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMR 287
            + V+ D   Y+ +I   CKK      L + + M+  G  P   T+ S+I     +G M 
Sbjct: 248 ERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMV 307

Query: 288 EARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSIL 345
           EA RL  ++   G   N V  T+L+ GYC   +L+ AL L   +   G++P  VTY+ ++
Sbjct: 308 EALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLI 367

Query: 346 RKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLM 405
              C  G I  A+ L  +M    I P     N+L+  Y K      A K+ +  ++ G+ 
Sbjct: 368 EGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVA 427

Query: 406 LDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKL 465
            + FTY  ++   CK  +MD A  LL  M++ G  P+  SY+ ++ G+C K N +    +
Sbjct: 428 -NIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSV 486

Query: 466 LDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWR 525
             + ++R L  +V  Y  LI    KK   + A  LF+ M    I      + ++     +
Sbjct: 487 FSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCK 546

Query: 526 AGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
            G+     D L +      + +   Y S    + K+  I
Sbjct: 547 VGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNI 585



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 110/397 (27%), Positives = 194/397 (48%), Gaps = 6/397 (1%)

Query: 132 VLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKM 191
           ++SWL       KM  +   + D M    ++P++ +   ++    +    DM   V+  M
Sbjct: 435 MMSWLC---KGGKM-DEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDM 490

Query: 192 VQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMH 251
           +   +  N+  Y++LI    K  D +K   L  +M   ++    FT+NT+I   CK G  
Sbjct: 491 LARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQM 550

Query: 252 YEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTL 309
            EA         EG  P  +TYNS++ GF +EG +  A  ++R++   G +PN VTYT+L
Sbjct: 551 SEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSL 610

Query: 310 IDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI 369
           I+G+C++N ++ AL+ R+ M  KG+   V  Y++++   CK   +  A  L  E+ E  +
Sbjct: 611 INGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGL 670

Query: 370 APDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKE 429
           +P+ +  N++I+ +  + +  +A+    +M+   +  D  TY  LI G  K   +  A +
Sbjct: 671 SPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASD 730

Query: 430 LLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFC 489
           L   ML  G  P   ++  LV+G CNK   E   K+L+E   + +   V +Y  LI  + 
Sbjct: 731 LYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYF 790

Query: 490 KKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRA 526
           ++  +  A  L + M   G++ D V Y  L    ++ 
Sbjct: 791 REGNLKEAFTLHDEMLDRGLVPDDVTYDILINGKFKG 827



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 93/330 (28%), Positives = 155/330 (46%), Gaps = 4/330 (1%)

Query: 127 DGNSHVLSWLVIFYANLKM--TQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMV 184
           D   +V+++ ++   N K   ++  L +FDQM   N+ P       ++N L K       
Sbjct: 494 DLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEA 553

Query: 185 WKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIAL 244
               K  ++ G + +   YN ++    K  ++D    +  EM    V  ++ TY +LI  
Sbjct: 554 RDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLING 613

Query: 245 YCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPN 302
           +CK      AL  +D M  +G+  D+  Y++LI GFC+   M  A+ LF ++   G +PN
Sbjct: 614 FCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPN 673

Query: 303 HVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLN 362
            + Y ++I G+   N++E AL   + M    +   + TY +++  L KEGR+  A+ L  
Sbjct: 674 RIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYM 733

Query: 363 EMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAK 422
           EM  K I PD +T + L+N  C  G   +A K+   M    +      Y  LI G+ +  
Sbjct: 734 EMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREG 793

Query: 423 EMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
            +  A  L   MLD G  P   +Y  L++G
Sbjct: 794 NLKEAFTLHDEMLDRGLVPDDVTYDILING 823



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 68/241 (28%), Positives = 110/241 (45%), Gaps = 37/241 (15%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           L V+ +M    + P++   T L+N   K    D+  K   +M + G+  ++  Y+ LI  
Sbjct: 589 LAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDG 648

Query: 210 CCKSSDVDKVEKLLCEM-----------------EFKD------------------VRAD 234
            CK  D++  + L  E+                  F+D                  +  D
Sbjct: 649 FCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCD 708

Query: 235 LFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR 294
           L TY TLI    K+G    A  +   M  +GI PDI+T++ L++G C +G++  AR++  
Sbjct: 709 LGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILE 768

Query: 295 --DIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEG 352
             D K  TP+ + Y TLI GY R  +L+EA  L + M  +G+ P  VTY+ ++    K  
Sbjct: 769 EMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILINGKFKGD 828

Query: 353 R 353
           R
Sbjct: 829 R 829



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 87/173 (50%), Gaps = 2/173 (1%)

Query: 107 RDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLH 166
           RD  S   +   L+++   P  N  V + ++  + +L   +  L  + +M    +   L 
Sbjct: 653 RDMESAQDLFFELLEVGLSP--NRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLG 710

Query: 167 ACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEM 226
             T L++ L K+        +Y +M+  G+V +I  ++VL++  C    ++   K+L EM
Sbjct: 711 TYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEM 770

Query: 227 EFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHG 279
           + K++   +  YNTLIA Y ++G   EA  + D M   G+ PD VTY+ LI+G
Sbjct: 771 DRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILING 823


>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Cucumis sativus]
          Length = 665

 Score =  214 bits (546), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 136/437 (31%), Positives = 211/437 (48%), Gaps = 13/437 (2%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQL---GVVANIHLY 203
           ++G +  + M     +P + ACT L+  L K   T   WK  + M  L   G V ++  Y
Sbjct: 127 EEGFKFLEDMVCRGDIPDIIACTSLIRGLCK---TGKTWKATRVMEILEDSGAVPDVITY 183

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER 263
           NVLI   CK+ ++    +LL  M    V  D+ TYNT++   C  G   EA+ V DR  +
Sbjct: 184 NVLISGYCKTGEIGSALQLLDRM---SVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQ 240

Query: 264 EGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEE 321
               PD++TY  LI   C+E  + +A +L  ++  KG  P+ VTY  LI+G C+   L+E
Sbjct: 241 RECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDE 300

Query: 322 ALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
           A+R    M + G  P V+T+N ILR +C  GR  DA + L EM  K  +P  VT N LIN
Sbjct: 301 AIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILIN 360

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
             C+ G    A+ V  +M + G   +  +Y  L+H  CK K+M+ A E L  M+  G  P
Sbjct: 361 FLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYP 420

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
              +Y+ L+   C     +  +++L++  S+G    +  Y  +I    K  K D A +L 
Sbjct: 421 DIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLL 480

Query: 502 NLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKD 561
           + M+G G+  D + Y++L     R G+         D+    +      Y S      K 
Sbjct: 481 DEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKA 540

Query: 562 NEILDL--FWSHVVDRG 576
            + +    F +++V RG
Sbjct: 541 RQTVRAIDFLAYMVARG 557



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 102/360 (28%), Positives = 188/360 (52%), Gaps = 6/360 (1%)

Query: 132 VLSWLVIFYANLKMTQDG--LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYK 189
           V+++ ++  A  K +  G  +++ D+MR     P +    VL+N + K+   D   +   
Sbjct: 247 VITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLN 306

Query: 190 KMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKG 249
            M   G   N+  +N+++ + C +      EK L EM  K     + T+N LI   C+KG
Sbjct: 307 HMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKG 366

Query: 250 MHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI---KGATPNHVTY 306
           +   A+ V ++M + G +P+ ++YN L+H  C++ +M  A   + DI   +G  P+ VTY
Sbjct: 367 LIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIE-YLDIMVSRGCYPDIVTY 425

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
            TL+   C+   ++ A+ +   + +KG  P ++TYN+++  L K G+  DA +LL+EM  
Sbjct: 426 NTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKG 485

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
           K + PD +T +TL+    + G    A+   + + E G+  +  TY +++ G CKA++   
Sbjct: 486 KGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVR 545

Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
           A + L  M+  G  P+  SY  L++G   +   +  L+LL+E  SRG+    S  + +++
Sbjct: 546 AIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNELCSRGVVKKSSAEQVVVK 605



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 125/471 (26%), Positives = 210/471 (44%), Gaps = 54/471 (11%)

Query: 94  FKSAQNMLEKIALRDFLSTPSVLNALVK------------IHDDPDGNSHVLSWLVIFYA 141
           FK  ++M+ +  + D ++  S++  L K            I +D      V+++ V+   
Sbjct: 130 FKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVITYNVLISG 189

Query: 142 NLKMTQDG--LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
             K  + G  LQ+ D+M V    P +     +L +L          +V  + +Q     +
Sbjct: 190 YCKTGEIGSALQLLDRMSVS---PDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYPD 246

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
           +  Y +LI A CK S V +  KLL EM  K  + D+ TYN LI   CK+G   EA+   +
Sbjct: 247 VITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLN 306

Query: 260 RME-----------------------------------REGISPDIVTYNSLIHGFCREG 284
            M                                    R+G SP +VT+N LI+  CR+G
Sbjct: 307 HMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKG 366

Query: 285 RMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYN 342
            +  A  +   +   G TPN ++Y  L+   C+   +E A+   ++M ++G YP +VTYN
Sbjct: 367 LIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYN 426

Query: 343 SILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEA 402
           ++L  LCK+G++  A  +LN++  K  +P  +T NT+I+   K+G T  A+K+ + M   
Sbjct: 427 TLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGK 486

Query: 403 GLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEAL 462
           GL  D  TY  L+ G  +  ++D A      + + G  P+  +Y+ ++ G C        
Sbjct: 487 GLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRA 546

Query: 463 LKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDS 513
           +  L   V+RG     + Y  LI     +     A  L N +   G++  S
Sbjct: 547 IDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNELCSRGVVKKS 597



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 97/349 (27%), Positives = 168/349 (48%), Gaps = 1/349 (0%)

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           ++ ++++  K L +M  +    D+    +LI   CK G  ++A  V + +E  G  PD++
Sbjct: 122 RNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVI 181

Query: 272 TYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAA 331
           TYN LI G+C+ G +  A +L  D    +P+ VTY T++   C +  L+EA+ + +    
Sbjct: 182 TYNVLISGYCKTGEIGSALQLL-DRMSVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQ 240

Query: 332 KGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTAS 391
           +  YP V+TY  ++   CKE  +  A +LL+EM +K   PD VT N LIN  CK G    
Sbjct: 241 RECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDE 300

Query: 392 AMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVD 451
           A++  N M   G   +  T+  ++   C       A++ L  M+  G SPS  +++ L++
Sbjct: 301 AIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILIN 360

Query: 452 GYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILG 511
             C K      + +L++    G   +   Y  L+   CK +K++ A    ++M   G   
Sbjct: 361 FLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYP 420

Query: 512 DSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAK 560
           D V Y +L  A  + G+     +IL+ +  +     L  Y +     +K
Sbjct: 421 DIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSK 469



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/189 (30%), Positives = 90/189 (47%), Gaps = 3/189 (1%)

Query: 339 VTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNR 398
           V  N+ LR+L + G + +  + L +M  +   PD + C +LI   CK G T  A +V   
Sbjct: 111 VENNNHLRRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEI 170

Query: 399 MLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNN 458
           + ++G + D  TY  LI G+CK  E+  A +LL  M     SP   +Y+ ++   C+   
Sbjct: 171 LEDSGAVPDVITYNVLISGYCKTGEIGSALQLLDRM---SVSPDVVTYNTILRTLCDSGK 227

Query: 459 EEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTS 518
            +  +++LD  + R    DV  Y  LI   CK+  V  A +L + M+  G   D V Y  
Sbjct: 228 LKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNV 287

Query: 519 LAYAYWRAG 527
           L     + G
Sbjct: 288 LINGICKEG 296


>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
          Length = 768

 Score =  214 bits (546), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 123/355 (34%), Positives = 188/355 (52%), Gaps = 4/355 (1%)

Query: 146 TQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNV 205
            Q+  Q   +M     +P       +++   K  +     ++ K  V  G V +   Y  
Sbjct: 296 VQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCS 355

Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
           LI+  C   D+++  +L  E + KD++ DL  YN+L+   C++G+   AL V + M  EG
Sbjct: 356 LINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEG 415

Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEAL 323
             PDI TYN +I+G C+ G + +A  +  D  +KG  P+  T+ TLIDGYC+   L+ AL
Sbjct: 416 CHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSAL 475

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
           +L E M   G+ P V+TYNS+L  LCK G+ ++ N    EM  K   P+ +T N LI  +
Sbjct: 476 QLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENF 535

Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA-GFSPS 442
           CKI     A  V  RM + GL+ D  ++  LIHGFC+  ++D A  LLF  LD  G+S +
Sbjct: 536 CKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAY-LLFQKLDEKGYSAT 594

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYA 497
             +++ L+  Y +K N +   K+  E +S+G   D+  YR L+   CK   VD A
Sbjct: 595 ADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRA 649



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 132/438 (30%), Positives = 226/438 (51%), Gaps = 15/438 (3%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
            +FD+M   ++ P +     +L++L +         +  K+++ G+ AN    N+ I   
Sbjct: 197 HLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGL 256

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           C+   +++   L+  M    V  D+ TYNTL+   CK     EA     RM  +G  PD 
Sbjct: 257 CEDGRLEEAVALVERMGAY-VAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDD 315

Query: 271 VTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
            TYN++I G+C+ G ++EA  L +D   KG  P+ VTY +LI+G C   D+E AL L   
Sbjct: 316 FTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNE 375

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
             AK + P +V YNS+++ LC++G I  A +++NEM E+   PD  T N +IN  CK+G+
Sbjct: 376 AQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGN 435

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
            + A  V N  +  G + D FT+  LI G+CK  ++D A +L+  M   G +P   +Y+ 
Sbjct: 436 ISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNS 495

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG 508
           +++G C     + + +  +E + +G   +   Y  LI  FCK  +++ A  +   M  +G
Sbjct: 496 VLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDG 555

Query: 509 ILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLF 568
           ++ D+V + +L + + R G+       LD  Y   L+      + +SA+    N ++  +
Sbjct: 556 LVPDAVSFNTLIHGFCRNGD-------LDGAY---LLFQKLDEKGYSATADTFNILIGAY 605

Query: 569 WSHVVDRGLMSKHIFKEM 586
            S +  +  M++ IF EM
Sbjct: 606 SSKLNMQ--MAEKIFGEM 621



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 130/422 (30%), Positives = 195/422 (46%), Gaps = 8/422 (1%)

Query: 168 CTVLLNSLAKD-RLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEM 226
           C + +  L +D RL + V  V +      V  ++  YN L+   CK S V +  + L  M
Sbjct: 249 CNIWIRGLCEDGRLEEAVALVERMGAY--VAPDVVTYNTLMRGLCKDSKVQEAAQYLGRM 306

Query: 227 EFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRM 286
             +    D FTYNT+I  YCK GM  EA  +      +G  PD VTY SLI+G C EG +
Sbjct: 307 MNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDI 366

Query: 287 REARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSI 344
             A  LF +   K   P+ V Y +L+ G CR   +  AL++   M  +G +P + TYN I
Sbjct: 367 ERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNII 426

Query: 345 LRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGL 404
           +  LCK G I DA  ++N+   K   PD  T NTLI+ YCK     SA+++  RM   G+
Sbjct: 427 INGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGI 486

Query: 405 MLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLK 464
             D  TY ++++G CKA +     E    M+  G  P+  +Y+ L++ +C  N  E    
Sbjct: 487 APDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASG 546

Query: 465 LLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYW 524
           ++      GL  D   +  LI  FC+   +D A  LF  +   G    +  +  L  AY 
Sbjct: 547 VIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYS 606

Query: 525 RAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFK 584
                +    I  +M  +     L  YR       K   + D  ++H+ +  ++SK    
Sbjct: 607 SKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANV-DRAYAHLAE--MISKGFVP 663

Query: 585 EM 586
            M
Sbjct: 664 SM 665



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 120/484 (24%), Positives = 214/484 (44%), Gaps = 38/484 (7%)

Query: 118 ALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAK 177
           A  + H  PD    +    +  YA     +  +  F++M +    P   A   ++++L  
Sbjct: 59  ASARSHLAPDSLQPLYVASIQAYARAGRLRAAVDAFERMDLFACPPAAPAYNAIMDALVN 118

Query: 178 DRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFT 237
               D   KVY +M+  GV  +   + V + + C +       +LL  +  +   A    
Sbjct: 119 AAYHDQAHKVYVRMLAAGVAPDARTHTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAA 178

Query: 238 YNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI- 296
           Y T++      G  Y A  + D M    + PD+ T+N+++H  C++G + E+  L   + 
Sbjct: 179 YCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVL 238

Query: 297 -KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIR 355
            +G + N  T    I G C    LEEA+ L E M A  V P VVTYN+++R LCK+ +++
Sbjct: 239 KRGMSANKFTCNIWIRGLCEDGRLEEAVALVERMGAY-VAPDVVTYNTLMRGLCKDSKVQ 297

Query: 356 DANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALI 415
           +A + L  M  +   PD+ T NT+I+ YCK G    A ++    +  G + D+ TY +LI
Sbjct: 298 EAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLI 357

Query: 416 HGFCKAKEMDIAKEL-----------------------------------LFGMLDAGFS 440
           +G C   +++ A EL                                   +  M++ G  
Sbjct: 358 NGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCH 417

Query: 441 PSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRL 500
           P   +Y+ +++G C   N      ++++ + +G   DV  +  LI  +CK+ K+D A +L
Sbjct: 418 PDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQL 477

Query: 501 FNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAK 560
              M   GI  D + Y S+     +AG+ K  ++  ++M  +        Y     ++ K
Sbjct: 478 VERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCK 537

Query: 561 DNEI 564
            N++
Sbjct: 538 INQL 541



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 85/367 (23%), Positives = 147/367 (40%), Gaps = 37/367 (10%)

Query: 198 ANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFT-YNTLIALYCKKGMHYEALA 256
           + I  Y  LI     +  +D V+  L           L   Y   I  Y + G    A+ 
Sbjct: 33  STIPAYRALIRELVSAGRLDDVDAALASARSHLAPDSLQPLYVASIQAYARAGRLRAAVD 92

Query: 257 VQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYC 314
             +RM+     P    YN+++          +A +++  +   G  P+  T+T  +  +C
Sbjct: 93  AFERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDARTHTVRLKSFC 152

Query: 315 RANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNV 374
                  ALRL   ++ +G       Y +++R L   G   +A  L +EM  + + PD  
Sbjct: 153 LTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDVA 212

Query: 375 TCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQF------------------------- 409
           T N +++A C+ GD   +  +  ++L+ G+  ++F                         
Sbjct: 213 TFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVERM 272

Query: 410 ---------TYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEE 460
                    TY  L+ G CK  ++  A + L  M++ G  P   +Y+ ++DGYC     +
Sbjct: 273 GAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQ 332

Query: 461 ALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLA 520
              +LL + V +G   D   Y +LI   C +  ++ A  LFN  Q   +  D V+Y SL 
Sbjct: 333 EATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLV 392

Query: 521 YAYWRAG 527
               R G
Sbjct: 393 KGLCRQG 399



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 59/228 (25%), Positives = 113/228 (49%), Gaps = 2/228 (0%)

Query: 149 GLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIH 208
            LQ+ ++M  + + P +     +LN L K      V + +++M+  G   N   YN+LI 
Sbjct: 474 ALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIE 533

Query: 209 ACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISP 268
             CK + +++   ++  M    +  D  ++NTLI  +C+ G    A  +  +++ +G S 
Sbjct: 534 NFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSA 593

Query: 269 DIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLR 326
              T+N LI  +  +  M+ A ++F ++  KG  P+  TY  L+DG C+A +++ A    
Sbjct: 594 TADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHL 653

Query: 327 EVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNV 374
             M +KG  P + T+  +L  L    R+ +A  +++ M    + P+ V
Sbjct: 654 AEMISKGFVPSMATFGRMLNLLAMNHRVSEAVAIIHIMVRMGVVPEVV 701



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/254 (21%), Positives = 104/254 (40%), Gaps = 18/254 (7%)

Query: 54  CHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKI----ALRDF 109
           C + ++S A     ++ V  Y   + +  T+I    K     SA  ++E++       D 
Sbjct: 431 CKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDV 490

Query: 110 LSTPSVLNALVKIHDDPD--------------GNSHVLSWLVIFYANLKMTQDGLQVFDQ 155
           ++  SVLN L K     +               N+   + L+  +  +   ++   V  +
Sbjct: 491 ITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVR 550

Query: 156 MRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSD 215
           M    L+P   +   L++   ++   D  + +++K+ + G  A    +N+LI A     +
Sbjct: 551 MCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLN 610

Query: 216 VDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNS 275
           +   EK+  EM  K  + DL+TY  L+   CK      A A    M  +G  P + T+  
Sbjct: 611 MQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGR 670

Query: 276 LIHGFCREGRMREA 289
           +++      R+ EA
Sbjct: 671 MLNLLAMNHRVSEA 684


>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  214 bits (545), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 128/428 (29%), Positives = 210/428 (49%), Gaps = 18/428 (4%)

Query: 116 LNALVKIHDDPDGNSHVLSWLVIFY-----ANLKMTQ--------DGLQVFDQMRVHNLM 162
            + L   H + +GN H  S    F      +N  + Q        +G +  + M  H  +
Sbjct: 75  FDTLASGHSNSNGNGHFSSANSSFVLEDVESNNHLRQLVRTGELEEGFKFLENMVYHGNV 134

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
           P +  CT L+    +   T    K+ + +   G V ++  YNV+I   CK+ +++    +
Sbjct: 135 PDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMISGYCKAGEINNALSV 194

Query: 223 LCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR 282
           L  M    V  D+ TYNT++   C  G   +A+ V DRM +    PD++TY  LI   CR
Sbjct: 195 LDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCR 251

Query: 283 EGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVT 340
           +  + +A +L  +++  G TP+ VTY  L++G C+   L+EA++    M + G  P V+T
Sbjct: 252 DSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVIT 311

Query: 341 YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML 400
           +N ILR +C  GR  DA +LL +M  K  +P  VT N LIN  C+ G    A+ +  +M 
Sbjct: 312 HNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMP 371

Query: 401 EAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEE 460
           + G   +  +Y  L+HGFCK K+MD A E L  M+  G  P   +Y+ ++   C     E
Sbjct: 372 KHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVE 431

Query: 461 ALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLA 520
             +++L++  S+G    +  Y  +I    K  K   A +L + M+   +  D++ Y+SL 
Sbjct: 432 DAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLV 491

Query: 521 YAYWRAGE 528
               R G+
Sbjct: 492 GGLSREGK 499



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 122/410 (29%), Positives = 200/410 (48%), Gaps = 20/410 (4%)

Query: 185 WKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIAL 244
           +K  + MV  G V +I     LI   C+     K  K+L  +E      D+ TYN +I+ 
Sbjct: 122 FKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMISG 181

Query: 245 YCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA-----RRLFRDIKGA 299
           YCK G    AL+V DRM    +SPD+VTYN+++   C  G++++A     R L RD    
Sbjct: 182 YCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRD---C 235

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
            P+ +TYT LI+  CR + + +A++L + M  +G  P VVTYN ++  +CKEGR+ +A +
Sbjct: 236 YPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIK 295

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
            LN+M      P+ +T N ++ + C  G    A K+   ML  G      T+  LI+  C
Sbjct: 296 FLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLC 355

Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
           +   +  A ++L  M   G  P+  SY+ L+ G+C +   +  ++ L+  VSRG   D+ 
Sbjct: 356 RKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIV 415

Query: 480 VYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
            Y  ++   CK  KV+ A  + N +   G     + Y ++     +AG+      +LD+M
Sbjct: 416 TYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEM 475

Query: 540 YRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKEMQLR 589
             + L      Y S     +++ +         VD  +   H F+ M +R
Sbjct: 476 RAKDLKPDTITYSSLVGGLSREGK---------VDEAIKFFHEFERMGVR 516



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 101/365 (27%), Positives = 180/365 (49%), Gaps = 37/365 (10%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           +  ++V D+M   +  P +   T+L+ +  +D       K+  +M   G   ++  YNVL
Sbjct: 221 KQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVL 280

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           ++  CK   +D+  K L +M     + ++ T+N ++   C  G   +A  +   M R+G 
Sbjct: 281 VNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGF 340

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALR 324
           SP +VT+N LI+  CR+G +  A  +   +   G  PN ++Y  L+ G+C+   ++ A+ 
Sbjct: 341 SPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIE 400

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
             E M ++G YP +VTYN++L  LCK+G++ DA  +LN+++ K  +P  +T NT+I+   
Sbjct: 401 YLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLA 460

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIH---------------------------- 416
           K G T  A+K+ + M    L  D  TY +L+                             
Sbjct: 461 KAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAV 520

Query: 417 -------GFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEF 469
                  G CK ++ D A + L  M++ G  P+  SY+ L++G   +   +  L+LL+E 
Sbjct: 521 TFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLAYEGMAKEALELLNEL 580

Query: 470 VSRGL 474
            ++GL
Sbjct: 581 CNKGL 585



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 100/365 (27%), Positives = 178/365 (48%), Gaps = 6/365 (1%)

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
           V +N HL  ++     ++ ++++  K L  M +     D+    TLI  +C+ G   +A 
Sbjct: 103 VESNNHLRQLV-----RTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAA 157

Query: 256 AVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCR 315
            + + +E  G  PD++TYN +I G+C+ G +  A  +  D    +P+ VTY T++   C 
Sbjct: 158 KILEVLEGSGAVPDVITYNVMISGYCKAGEINNALSVL-DRMSVSPDVVTYNTILRSLCD 216

Query: 316 ANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVT 375
           +  L++A+ + + M  +  YP V+TY  ++   C++  +  A +LL+EM ++   PD VT
Sbjct: 217 SGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVT 276

Query: 376 CNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGML 435
            N L+N  CK G    A+K  N M  +G   +  T+  ++   C       A++LL  ML
Sbjct: 277 YNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADML 336

Query: 436 DAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVD 495
             GFSPS  +++ L++  C K      + +L++    G   +   Y  L+  FCK++K+D
Sbjct: 337 RKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMD 396

Query: 496 YAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFS 555
            A      M   G   D V Y ++  A  + G+ +   +IL+ +  +     L  Y +  
Sbjct: 397 RAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVI 456

Query: 556 ASYAK 560
              AK
Sbjct: 457 DGLAK 461


>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
 gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
          Length = 581

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 127/433 (29%), Positives = 216/433 (49%), Gaps = 39/433 (9%)

Query: 149 GLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIH 208
           G+++F+++      P +     L++SL K    +   +++  M   G V N+  Y+VLI+
Sbjct: 100 GMELFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLIN 159

Query: 209 ACCKSSDVDKVEKLLCEMEFK--DVRADLFTYNTLIALYCKKGMHYEAL----------- 255
             CK   +D+  +L+ EM  K  DV  ++ TYN+ +   CK+ M  EA            
Sbjct: 160 GLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSL 219

Query: 256 ------------------------AVQDRMEREGISPDIVTYNSLIHGFCREGRMREARR 291
                                   A  D M   G  P++VTYN+L++G C+  +M  A  
Sbjct: 220 RVSPDTVTFSTLIDGLCKCGQTDEACNDDMIAGGYVPNVVTYNALVNGLCKADKMERAHA 279

Query: 292 LFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLC 349
           +   +  KG TP+ +TY+ L+D +C+A+ ++EAL L   MA++G  P VVT+NSI+  LC
Sbjct: 280 MIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLC 339

Query: 350 KEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQF 409
           K  R  +A ++  ++  + + PD VT N LI   CK G+   A  +   M+   +  D  
Sbjct: 340 KSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVM 399

Query: 410 TYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEF 469
           T+ ALI G CKA +++ A+++L  M + G  P+  +Y+ LV G C     E   + L+E 
Sbjct: 400 TFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEM 459

Query: 470 VSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEP 529
           VS G   +   Y +L+   C+  + D A +L + ++  G   D+V Y  L    W++G+ 
Sbjct: 460 VSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKT 519

Query: 530 KACSDILDDMYRR 542
           +    +L++M  +
Sbjct: 520 EQAITVLEEMVGK 532



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 110/369 (29%), Positives = 191/369 (51%), Gaps = 9/369 (2%)

Query: 203 YNVLIHACCKSSDVDK-VEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRM 261
           YN+++ + C++ +  + +E    EM    V   + TYNT+I   CK       + + + +
Sbjct: 48  YNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEEL 107

Query: 262 EREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDL 319
            + G  PD+VTYN+LI   C+ G + EARRL   +  +G  PN VTY+ LI+G C+   +
Sbjct: 108 VKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRI 167

Query: 320 EEALRLREVMAAKG--VYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEK--KIAPDNVT 375
           +EA  L + M  K   V P ++TYNS L  LCK+    +A  L+  + +   +++PD VT
Sbjct: 168 DEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVT 227

Query: 376 CNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGML 435
            +TLI+  CK G T  A    + M+  G + +  TY AL++G CKA +M+ A  ++  M+
Sbjct: 228 FSTLIDGLCKCGQTDEA--CNDDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMV 285

Query: 436 DAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVD 495
           D G +P   +YS LVD +C  +  +  L+LL    SRG   +V  + ++I   CK ++  
Sbjct: 286 DKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSG 345

Query: 496 YAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFS 555
            A ++   +    ++ D V +  L     +AG  +  S + ++M  + +   +  + +  
Sbjct: 346 EAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALI 405

Query: 556 ASYAKDNEI 564
               K  ++
Sbjct: 406 DGLCKAGQV 414



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 109/333 (32%), Positives = 174/333 (52%), Gaps = 12/333 (3%)

Query: 223 LCEMEFKDVRAD---LFTYNTLIALYCKKGMHYEALAV-QDRMEREGISPDIVTYNSLIH 278
           LC ++F  VR+    +  YN ++   C+ G    AL + +  M R+G++P IVTYN++I+
Sbjct: 30  LCPLKFFFVRSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIIN 89

Query: 279 GFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYP 336
           G C+   +     LF ++  +G  P+ VTY TLID  C+A DLEEA RL   M+++G  P
Sbjct: 90  GLCKSNELGAGMELFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVP 149

Query: 337 GVVTYNSILRKLCKEGRIRDANRLLNEMNEKK--IAPDNVTCNTLINAYCKIGDTASAMK 394
            VVTY+ ++  LCK GRI +A  L+ EM  K   + P+ +T N+ ++  CK   TA A +
Sbjct: 150 NVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACE 209

Query: 395 VKNRMLEAGLML--DQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
           +   + +  L +  D  T+  LI G CK  + D A      M+  G+ P+  +Y+ LV+G
Sbjct: 210 LMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNG 267

Query: 453 YCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGD 512
            C  +  E    +++  V +G+  DV  Y  L+  FCK  +VD A  L + M   G   +
Sbjct: 268 LCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPN 327

Query: 513 SVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
            V + S+     ++        I   +Y R L+
Sbjct: 328 VVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLV 360



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 106/380 (27%), Positives = 186/380 (48%), Gaps = 6/380 (1%)

Query: 144 KMTQDGLQVFDQMRVHNL--MPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIH 201
            MT +  ++   +R  +L   P     + L++ L K   TD        M+  G V N+ 
Sbjct: 202 SMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVV 259

Query: 202 LYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRM 261
            YN L++  CK+  +++   ++  M  K V  D+ TY+ L+  +CK     EAL +   M
Sbjct: 260 TYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGM 319

Query: 262 EREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDL 319
              G +P++VT+NS+I G C+  R  EA ++   +  +   P+ VT+  LI G C+A + 
Sbjct: 320 ASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNF 379

Query: 320 EEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTL 379
           E+A  L E M AK + P V+T+ +++  LCK G++  A  +L+ M    + P+ VT N L
Sbjct: 380 EQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVL 439

Query: 380 INAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGF 439
           ++  CK G      +    M+ +G + +  TY +L++  C+A   D A +L+  +   G+
Sbjct: 440 VHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGW 499

Query: 440 SPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQR 499
            P   +Y+ LVDG       E  + +L+E V +G   D   + A      +   +     
Sbjct: 500 DPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTME 559

Query: 500 LFNLMQGNGILGDSVIYTSL 519
           L  ++   G+L D+   +S+
Sbjct: 560 LLRVVLAKGMLPDATTCSSI 579



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 97/334 (29%), Positives = 168/334 (50%), Gaps = 2/334 (0%)

Query: 154 DQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKS 213
           D M     +P++     L+N L K    +    + + MV  GV  ++  Y+VL+ A CK+
Sbjct: 247 DDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKA 306

Query: 214 SDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTY 273
           S VD+  +LL  M  +    ++ T+N++I   CK     EA  +  ++    + PD VT+
Sbjct: 307 SRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTF 366

Query: 274 NSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAA 331
           N LI G C+ G   +A  LF ++  K   P+ +T+  LIDG C+A  +E A  + ++M  
Sbjct: 367 NILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGN 426

Query: 332 KGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTAS 391
            GV P VVTYN ++  LCK GRI +    L EM      P+++T  +L+ A C+   T  
Sbjct: 427 LGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDD 486

Query: 392 AMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVD 451
           A+++ +++   G   D  TY  L+ G  K+ + + A  +L  M+  G  P   +++    
Sbjct: 487 ALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFG 546

Query: 452 GYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
           G     N    ++LL   +++G+  D +   +++
Sbjct: 547 GLHRSGNLAGTMELLRVVLAKGMLPDATTCSSIL 580



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 86/302 (28%), Positives = 147/302 (48%), Gaps = 2/302 (0%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           + + M    + P +   +VL+++  K    D   ++   M   G   N+  +N +I   C
Sbjct: 280 MIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLC 339

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           KS    +  ++  ++  + +  D  T+N LIA  CK G   +A A+ + M  + + PD++
Sbjct: 340 KSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVM 399

Query: 272 TYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           T+ +LI G C+ G++  AR +   +   G  PN VTY  L+ G C++  +EE     E M
Sbjct: 400 TFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEM 459

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
            + G  P  +TY S++  LC+  R  DA +L++++      PD VT N L++   K G T
Sbjct: 460 VSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKT 519

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
             A+ V   M+  G   D FT+ A   G  ++  +    ELL  +L  G  P   + S +
Sbjct: 520 EQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSI 579

Query: 450 VD 451
           +D
Sbjct: 580 LD 581


>gi|414887654|tpg|DAA63668.1| TPA: hypothetical protein ZEAMMB73_339081 [Zea mays]
          Length = 1098

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 140/501 (27%), Positives = 238/501 (47%), Gaps = 10/501 (1%)

Query: 74  YKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVL 133
           +  SL +H  ++HIL + +    A+ +L  + L      P +   LV+++ +   ++   
Sbjct: 118 FPPSLLAHAQLLHILVRARRSADARAILASL-LSARPPAPPLFPHLVEVYKEFSFSAASF 176

Query: 134 SWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQ 193
             L+   AN       LQVFD+MR       + +C  +LN LA+         V+++M +
Sbjct: 177 DLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATVAVFEQMQR 236

Query: 194 LGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYE 253
            G + +     ++  A CK   V    + + EM    V  +L  Y+ ++  YC+ G   +
Sbjct: 237 AGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGYCEVGQTND 296

Query: 254 ALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI---KGATPNHVTYTTLI 310
           A  + D +   G SP+IVTY  L+ G+C E  M EA  + ++I   K    +   +  +I
Sbjct: 297 ARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAVFGAVI 356

Query: 311 DGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIA 370
           +GYC+   +E+A RL   M    +   +  YN ++   CK GR+ +A+ +L+EM    + 
Sbjct: 357 NGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVGVR 416

Query: 371 PDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL 430
           PD  + N+L++ YCK G    A +  N ML  G      TY AL+ GFC    +D A  L
Sbjct: 417 PDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRL 476

Query: 431 LFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCK 490
            F ML  G +P+  S S L+DG+      E  L L  E ++RGL  + + +  +I   CK
Sbjct: 477 WFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCK 536

Query: 491 KEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKI 550
            E++  A+ L + M+      D + Y +L   Y + G+    S IL+++       T++ 
Sbjct: 537 IERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEF 596

Query: 551 YRSF------SASYAKDNEIL 565
           + S       +  + K N+IL
Sbjct: 597 FNSLITGHFIAKQHGKVNDIL 617



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 101/329 (30%), Positives = 179/329 (54%), Gaps = 2/329 (0%)

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
           ++  +MV   +  N+ +YN++I+  CK   + +   +L EM    VR D ++YN+L+  Y
Sbjct: 370 RLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGY 429

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNH 303
           CKKG+  +A    + M R G +   +TYN+L+ GFC  G + +A RL+  +  KG  PN 
Sbjct: 430 CKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNE 489

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
           ++ +TL+DG+ ++   E+AL L +   A+G+     T+N+++  LCK  R+ +A  L+++
Sbjct: 490 ISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDK 549

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
           M + +  PD +T  TL + YCKIGD   A ++ N +   G       + +LI G   AK+
Sbjct: 550 MKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQ 609

Query: 424 MDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRA 483
                ++LF M + G SP+  +Y  L+ G+C + +      L  E + +GL  ++ +  +
Sbjct: 610 HGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSS 669

Query: 484 LIRRFCKKEKVDYAQRLFNLMQGNGILGD 512
           L+  F +K K D A  +   + G  ++ D
Sbjct: 670 LVSCFYRKGKFDEANLVLQNLVGTDMIPD 698



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 110/405 (27%), Positives = 200/405 (49%), Gaps = 7/405 (1%)

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDR---LTDMVWKVYKKMVQLGV 196
           Y  +  T D  ++ D +      P++   T+L+     ++     + V +  +K  QL  
Sbjct: 288 YCEVGQTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQL-- 345

Query: 197 VANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALA 256
           V +  ++  +I+  C+   ++   +LL EM    ++ +LF YN +I  YCK G   EA  
Sbjct: 346 VVDEAVFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHN 405

Query: 257 VQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYC 314
           +   M   G+ PD  +YNSL+ G+C++G M +A   +  +   G     +TY  L+ G+C
Sbjct: 406 ILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFC 465

Query: 315 RANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNV 374
               +++ALRL  +M  KG+ P  ++ +++L    K G+   A  L  E   + +A +  
Sbjct: 466 SLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTT 525

Query: 375 TCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGM 434
           T NT+IN  CKI     A ++ ++M +     D  TY+ L  G+CK  +MD A  +L  +
Sbjct: 526 TFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNEL 585

Query: 435 LDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKV 494
            + GF+P+   ++ L+ G+        +  +L E  +RGL  +   Y ALI  +CK+  +
Sbjct: 586 ENLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDL 645

Query: 495 DYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
             A  L+  M   G++ +  I +SL   ++R G+    + +L ++
Sbjct: 646 HTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNL 690



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 128/515 (24%), Positives = 216/515 (41%), Gaps = 53/515 (10%)

Query: 91  NKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGL 150
           NK F++   ML       F +T    NAL+K                  + +L    D L
Sbjct: 436 NKAFETYNTMLRN----GFAATTLTYNALLK-----------------GFCSLGSIDDAL 474

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           +++  M    + P+  +C+ LL+   K   T+    ++K+ +  G+  N   +N +I+  
Sbjct: 475 RLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGL 534

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           CK   + + E+L+ +M+      D+ TY TL + YCK G    A  + + +E  G +P I
Sbjct: 535 CKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTI 594

Query: 271 VTYNSLIHG-FCREGRMREARRLFR-DIKGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
             +NSLI G F  +   +    LF    +G +PN V Y  LI G+C+  DL  A  L   
Sbjct: 595 EFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLE 654

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPD---------------- 372
           M  KG+ P +   +S++    ++G+  +AN +L  +    + PD                
Sbjct: 655 MIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPDISAPRLEIGKVANFID 714

Query: 373 ----------NVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAK 422
                      +  N +I   CK+G    A  +   + + G + D FTY +LIHG   + 
Sbjct: 715 TVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASG 774

Query: 423 EMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYR 482
            +D+A +L   ML  G +P+  +Y+ L+ G C        + L  +  ++G+  +   Y 
Sbjct: 775 FVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYN 834

Query: 483 ALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRR 542
            LI + CK   +  A +L   M   GI      Y+ L       G  +    +LD M   
Sbjct: 835 TLIDKHCKDGYITEAFKLKQRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQMIEN 894

Query: 543 RLMITLKIYRSFSASYAK----DNEILDLFWSHVV 573
            +      Y +    Y +    D  I+ L  S +V
Sbjct: 895 NVDPNYVTYWTLIQGYVRCESVDVPIMPLDQSTIV 929



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 121/453 (26%), Positives = 209/453 (46%), Gaps = 56/453 (12%)

Query: 66  WAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKI----ALRDFLSTPSVLNALVK 121
           W E+       +  +  T+I+ L K +    A+ +++K+       D ++  ++ +   K
Sbjct: 512 WKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCK 571

Query: 122 IHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLT 181
           I  D D  S +L+ L     NL      ++ F+ +   + +   H            ++ 
Sbjct: 572 I-GDMDRASRILNEL----ENLGFAPT-IEFFNSLITGHFIAKQHG-----------KVN 614

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
           D++++    M   G+  N   Y  LI   CK  D+     L  EM  K +  +LF  ++L
Sbjct: 615 DILFE----MSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSL 670

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDI--------------------------VTYNS 275
           ++ + +KG   EA  V   +    + PDI                          + +N 
Sbjct: 671 VSCFYRKGKFDEANLVLQNLVGTDMIPDISAPRLEIGKVANFIDTVAGGNHHSAKIMWNI 730

Query: 276 LIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKG 333
           +I G C+ GR+ +A+ L  D+K  G   ++ TY++LI G   +  ++ A  LR+ M + G
Sbjct: 731 VIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVG 790

Query: 334 VYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAM 393
           + P +VTYNS++  LCK G +  A  L  ++  K I+P+ +T NTLI+ +CK G    A 
Sbjct: 791 LTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAF 850

Query: 394 KVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGY 453
           K+K RM+E G+    FTY  LI+G C    M+ A +LL  M++    P+Y +Y  L+ GY
Sbjct: 851 KLKQRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTLIQGY 910

Query: 454 CNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
               + +  +  LD+     + V  S  RA+ R
Sbjct: 911 VRCESVDVPIMPLDQ---STIVVKASPRRAVRR 940


>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
 gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
          Length = 608

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 131/458 (28%), Positives = 223/458 (48%), Gaps = 5/458 (1%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           S+L  + K+   P  ++   + L+    N    ++ +++F++M      P++ +   ++N
Sbjct: 144 SILGKMFKLGIHPTAST--FNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIIN 201

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
            L K   T M   V+KKM Q G   ++  YN +I + CK   V+   + L EM  + +  
Sbjct: 202 GLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPP 261

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           ++FTYN ++  +C  G   EA  +   M    + PD VT   L+ G C+EG + EAR +F
Sbjct: 262 NVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVF 321

Query: 294 RDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
             +  KG  PN  TY  L+DGYC    + EA ++ E+M  +G  PGV +YN ++   CK 
Sbjct: 322 ETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKS 381

Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
            R+ +A  LL EM  K + PD VT +TL+   C+ G    A+ +   M   GL+ +  TY
Sbjct: 382 RRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTY 441

Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
             L+ GFCK   +D A +LL  M +    P+   ++ L++G       E   +L  +  +
Sbjct: 442 SILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFA 501

Query: 472 RGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKA 531
            G+   +  Y  +I+   K+   D A  LF  M+ +G L +S  Y  +   + +  +   
Sbjct: 502 DGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSST 561

Query: 532 CSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFW 569
              ++D+M  +R    L  ++      ++D EI+  F 
Sbjct: 562 AIRLIDEMVGKRFSANLSTFQMLLDLESQD-EIISQFM 598



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 123/420 (29%), Positives = 202/420 (48%), Gaps = 5/420 (1%)

Query: 154 DQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKS 213
           +QM +  +  ++++  VL+N L +    D    +  KM +LG+      +N LI+  C  
Sbjct: 112 NQMDLFGVTHNVYSLNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNE 171

Query: 214 SDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTY 273
             + +  +L  EM  +    ++ +YNT+I   CK G    A+ V  +ME+ G  PD+VTY
Sbjct: 172 GKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTY 231

Query: 274 NSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAA 331
           N++I   C++  + +A     ++  +G  PN  TY  ++ G+C    L EA RL + M  
Sbjct: 232 NTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVG 291

Query: 332 KGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTAS 391
           + V P  VT   ++  LCKEG + +A  +   M EK + P+  T N L++ YC       
Sbjct: 292 RDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNE 351

Query: 392 AMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVD 451
           A KV   M+  G      +Y  LI+GFCK++ MD AK LL  M     +P   +YS L+ 
Sbjct: 352 AKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQ 411

Query: 452 GYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILG 511
           G C     +  L +  E  S GL  ++  Y  L+  FCK   +D A +L   MQ   +  
Sbjct: 412 GLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEP 471

Query: 512 DSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKD---NEILDLF 568
           + V +T L    + AG+ +   ++   ++   +  T++ Y        K+   +E  DLF
Sbjct: 472 NIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLF 531



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 118/399 (29%), Positives = 195/399 (48%), Gaps = 2/399 (0%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D L  F +M   N  P +      L S AK +    V  +  +M   GV  N++  NVLI
Sbjct: 71  DALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVLI 130

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           +  C+ + VD    +L +M    +     T+N LI   C +G   EA+ + + M R G  
Sbjct: 131 NCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHE 190

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRL 325
           P++++YN++I+G C+ G    A  +F+ ++  G  P+ VTY T+ID  C+   + +A+  
Sbjct: 191 PNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEF 250

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
              M  +G+ P V TYN ++   C  G++ +A RL  EM  + + PD VT   L++  CK
Sbjct: 251 LSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCK 310

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            G  + A  V   M E G+  +  TY AL+ G+C  + M+ AK++   M+  G +P   S
Sbjct: 311 EGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHS 370

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+ L++G+C     +    LL E   + L  D   Y  L++  C+  +   A  +F  M 
Sbjct: 371 YNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMC 430

Query: 506 GNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL 544
             G+L + V Y+ L   + + G       +L  M  ++L
Sbjct: 431 SYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKL 469



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 104/366 (28%), Positives = 185/366 (50%), Gaps = 2/366 (0%)

Query: 188 YKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCK 247
           + +MV++    ++  +   + +  K      V  L  +M+   V  ++++ N LI   C+
Sbjct: 76  FYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVLINCLCR 135

Query: 248 KGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVT 305
                 A+++  +M + GI P   T+N+LI+G C EG+++EA  LF ++  +G  PN ++
Sbjct: 136 LNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVIS 195

Query: 306 YTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMN 365
           Y T+I+G C+  +   A+ + + M   G  P VVTYN+I+  LCK+  + DA   L+EM 
Sbjct: 196 YNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEML 255

Query: 366 EKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMD 425
           ++ I P+  T N +++ +C +G    A ++   M+   +M D  T   L+ G CK   + 
Sbjct: 256 DRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVS 315

Query: 426 IAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
            A+ +   M + G  P+  +Y+ L+DGYC +       K+ +  + +G    V  Y  LI
Sbjct: 316 EARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILI 375

Query: 486 RRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
             FCK  ++D A+ L   M    +  D+V Y++L     + G PK   +I  +M    L+
Sbjct: 376 NGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLL 435

Query: 546 ITLKIY 551
             L  Y
Sbjct: 436 PNLVTY 441


>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
 gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
          Length = 573

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 126/398 (31%), Positives = 208/398 (52%), Gaps = 7/398 (1%)

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
           P +   T++++   K          ++KM +  V  N   YNV+++  CK+    K  ++
Sbjct: 5   PTVVTWTIIIDGFCKANQLKQALACFEKMREF-VAPNERTYNVVVNGLCKARLTSKAYEV 63

Query: 223 LCEM-EFKDVRADLFTYNTLIALYCKKGMHYEALAV-QDRMEREGISPDIVTYNSLIHGF 280
           L EM + K V  DL TY+T+I  +CK+G    A  + ++ + R+GI+PD+VTY S++ G 
Sbjct: 64  LKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGL 123

Query: 281 CREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEALRL-REVMAAKGVYPG 337
           CR+G+M  A  + R+  +KG  P+  T++ LI G+C A  ++EAL+L +E++ +    P 
Sbjct: 124 CRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPD 183

Query: 338 VVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKN 397
           VVTY +++   CK G +  A ++L  M  +K  P+ VT ++L++  CK GD   A+ +  
Sbjct: 184 VVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFR 243

Query: 398 RMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKN 457
           RM   G + +  TY  LIHG C A ++D A+ L+  M      P   SY+ L+DGYC   
Sbjct: 244 RMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLG 303

Query: 458 NEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF-NLMQGNGILGDSVIY 516
             E   +L  E  ++    D   Y  L+R FC   +++ A+ L  N+    GI  D V Y
Sbjct: 304 RIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTY 363

Query: 517 TSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSF 554
           + +   Y RA      ++ + +M  R +      Y S 
Sbjct: 364 SIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSL 401



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 128/488 (26%), Positives = 228/488 (46%), Gaps = 60/488 (12%)

Query: 82  WTMI-HILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFY 140
           WT+I     K    K A    EK  +R+F++                 N    + +V   
Sbjct: 10  WTIIIDGFCKANQLKQALACFEK--MREFVAP----------------NERTYNVVVNGL 51

Query: 141 ANLKMTQDGLQVFDQMR-VHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMV-QLGVVA 198
              ++T    +V  +MR   ++ P L   + ++N   K    D   ++ ++MV + G+  
Sbjct: 52  CKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAP 111

Query: 199 NIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAV- 257
           ++  Y  ++   C+   +D+  +++ EM+ K V  D FT++ LI  +C      EAL + 
Sbjct: 112 DVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLY 171

Query: 258 QDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKG--ATPNHVTYTTLIDGYCR 315
           ++ +      PD+VTY +LI GFC+ G + +A ++   ++G    PN VTY++L+ G C+
Sbjct: 172 KEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCK 231

Query: 316 ANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVT 375
           A DL++AL L   M +KG  P VVTY +++  LC   ++  A  L++EM      PD V+
Sbjct: 232 AGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVS 291

Query: 376 CNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL---- 431
            N L++ YC++G    A ++   M     + D+ TY  L+ GFC A  ++ A+ LL    
Sbjct: 292 YNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMK 351

Query: 432 -----------FGMLDAGFS---------------------PSYCSYSWLVDGYCNKNNE 459
                      + ++ AG+S                     P+  +YS L+DG C     
Sbjct: 352 TAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRV 411

Query: 460 EALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
           +  +++L   V++ +   V  + ++I   C+   +D A +L   M  +G+    V YT+L
Sbjct: 412 DHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTL 471

Query: 520 AYAYWRAG 527
              + R G
Sbjct: 472 LEGFSRTG 479



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 106/337 (31%), Positives = 161/337 (47%), Gaps = 12/337 (3%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           +  +++   M     +P++   + LL+ L K    D    ++++M   G V N+  Y  L
Sbjct: 201 EKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTL 260

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           IH  C +  VD    L+ EM       D  +YN L+  YC+ G   EA  +   M  +  
Sbjct: 261 IHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSC 320

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDIK---GATPNHVTYTTLIDGYCRANDLEEAL 323
            PD +TY  L+ GFC   R+ EAR L  ++K   G  P+ VTY+ ++ GY RA    EA 
Sbjct: 321 LPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAA 380

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
              + M A+ V P  VTY+S++  LCK GR+  A  +L  M  K++ P   T N++I A 
Sbjct: 381 EFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGAL 440

Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGM--------L 435
           C++GD   A K+   M   GL     TY  L+ GF +   M+IA EL   M         
Sbjct: 441 CRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSS 500

Query: 436 DAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSR 472
            A   P   ++S L+ G C     +  + +++E  SR
Sbjct: 501 AANLVPEQ-AFSALIRGLCKAREIDKAMAVVEELRSR 536


>gi|357115900|ref|XP_003559723.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like, partial [Brachypodium distachyon]
          Length = 907

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 136/483 (28%), Positives = 240/483 (49%), Gaps = 4/483 (0%)

Query: 75  KHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLS 134
           + SL +H  ++HIL   + F +A+ +L  +     ++ P++   LV+++ D   ++    
Sbjct: 40  RPSLLAHAQLLHILAHARRFPAARALLASLLSAHSVA-PTLFPDLVEVYKDFSFSAASFD 98

Query: 135 WLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQL 194
            L+  +A+    +D L VFD+M        L +C  LLN L +         V+++M   
Sbjct: 99  LLLRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDIGTAVAVFQQMRCA 158

Query: 195 GVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEA 254
           G + +     ++  A C+   V      L EME   +  +L  Y+ ++  YC+ G    A
Sbjct: 159 GTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMDGYCRIGQTEVA 218

Query: 255 LAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGATP---NHVTYTTLID 311
             +   ++ +G+SP++VTY  L+ G+C+EGRM EA ++ ++IK       + V Y  LI+
Sbjct: 219 RKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVIDEVAYGALIN 278

Query: 312 GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAP 371
           GYC+   +E+A R+R+ M   GV   +  YN+++   CK GR+ +  +LL     + +  
Sbjct: 279 GYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQANEYRGVNL 338

Query: 372 DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
           D  + NTL++ YC+ G    A +  + M+  G      TY  L++GFC    +D A +L 
Sbjct: 339 DEYSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDALKLW 398

Query: 432 FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
           F ML  G  P+  S S L+DG+      E  L L  E ++RGL  +V     +I   CK 
Sbjct: 399 FLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVINGLCKN 458

Query: 492 EKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIY 551
            ++  A+ LF+ M+      DS+ Y +L   Y + G+    + I  +M     + +++++
Sbjct: 459 RRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSVEMF 518

Query: 552 RSF 554
            SF
Sbjct: 519 NSF 521



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 105/329 (31%), Positives = 177/329 (53%), Gaps = 2/329 (0%)

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
           +V  +M+  GV  N+ +YN +I+  CK   + +VEKLL   E++ V  D ++YNTL+  Y
Sbjct: 291 RVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQANEYRGVNLDEYSYNTLVDGY 350

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNH 303
           C+KG   +A    D M R G +   +TYN+L++GFC  G + +A +L+  +  +G  PN 
Sbjct: 351 CRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDALKLWFLMLKRGVVPNE 410

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
           ++ +TL+DG+ +A   E+AL L +   A+G+   VVT N+++  LCK  R+ +A  L + 
Sbjct: 411 ISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVINGLCKNRRMTEAEELFHR 470

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
           M E     D++T  TLI+ YCK+GD   A +++  M   G +     + + I G   AK+
Sbjct: 471 MKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSVEMFNSFITGLFIAKQ 530

Query: 424 MDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRA 483
                ++   M   G SP+  +Y  L+ G+C + N      L  E V +GL  ++ +   
Sbjct: 531 SGKVNDIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDACILYFEMVEKGLKPNLFICSV 590

Query: 484 LIRRFCKKEKVDYAQRLFNLMQGNGILGD 512
           L+  F ++ KVD A  +   +    ++ D
Sbjct: 591 LVSCFYREGKVDEANLVLQKLADTDMIQD 619



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 116/456 (25%), Positives = 200/456 (43%), Gaps = 63/456 (13%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D L+++  M    ++P+  +C+ LL+   K   T+    ++K+ +  G+  N+   N +I
Sbjct: 393 DALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVI 452

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER---- 263
           +  CK+  + + E+L   M+      D  TY TLI  YCK G    A  ++  ME     
Sbjct: 453 NGLCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFV 512

Query: 264 -------------------------------EGISPDIVTYNSLIHGFCREGRMREARRL 292
                                          +G+SP+ VTY +LI G+C+EG + +A  L
Sbjct: 513 PSVEMFNSFITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDACIL 572

Query: 293 FRDI--KGATPNHVTYTTLIDGYCRANDLEEA--------------------------LR 324
           + ++  KG  PN    + L+  + R   ++EA                            
Sbjct: 573 YFEMVEKGLKPNLFICSVLVSCFYREGKVDEANLVLQKLADTDMIQDCSASTLNIGKVAH 632

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           + E +A        + +N ++  LCK GR+ DA  L  ++  K   PDN T ++LI+   
Sbjct: 633 IIESLAGGNHQSAKIMWNIVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCS 692

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
             G    A  +++ ML A L  +  TY +LI+G CK+  +  A  L   +   G SP+  
Sbjct: 693 ASGSIDLAFGLRDEMLSARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAI 752

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
           +Y+ L+DG+C   N     KL  + +  G+   V  Y  LI   C +  ++ A +L + M
Sbjct: 753 TYNTLIDGHCKDGNTTEAFKLKQKMIKEGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQM 812

Query: 505 QGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMY 540
             N +  + + Y +L   Y R G  KA + + ++M+
Sbjct: 813 IENNVDPNFITYWTLIQGYARCGNMKAITKLYNEMH 848



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 116/437 (26%), Positives = 201/437 (45%), Gaps = 45/437 (10%)

Query: 66  WAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDD 125
           W E+       ++ +  T+I+ L KN+    A+ +  +  ++++ S P            
Sbjct: 433 WKETLARGLARNVVTINTVINGLCKNRRMTEAEELFHR--MKEW-SCPC----------- 478

Query: 126 PDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVW 185
              +S     L+  Y  L       Q+  +M     +P +      +  L   + +  V 
Sbjct: 479 ---DSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSVEMFNSFITGLFIAKQSGKVN 535

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
            +  +M   G+  N   Y  LI   CK  ++     L  EM  K ++ +LF  + L++ +
Sbjct: 536 DIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDACILYFEMVEKGLKPNLFICSVLVSCF 595

Query: 246 CKKGMHYEALAVQDRMEREGISPDI--------------------------VTYNSLIHG 279
            ++G   EA  V  ++    +  D                           + +N +I G
Sbjct: 596 YREGKVDEANLVLQKLADTDMIQDCSASTLNIGKVAHIIESLAGGNHQSAKIMWNIVILG 655

Query: 280 FCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPG 337
            C+ GR+ +AR LF D  +KG  P++ TY++LI G   +  ++ A  LR+ M +  + P 
Sbjct: 656 LCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSIDLAFGLRDEMLSARLTPN 715

Query: 338 VVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKN 397
           +VTYNS++  LCK   +  A  L N++  K I+P+ +T NTLI+ +CK G+T  A K+K 
Sbjct: 716 IVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNTTEAFKLKQ 775

Query: 398 RMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKN 457
           +M++ G+    FTY  LIHG C    M+ A +LL  M++    P++ +Y  L+ GY    
Sbjct: 776 KMIKEGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQMIENNVDPNFITYWTLIQGYARCG 835

Query: 458 NEEALLKLLDEFVSRGL 474
           N +A+ KL +E    GL
Sbjct: 836 NMKAITKLYNEMHICGL 852



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 91/349 (26%), Positives = 158/349 (45%), Gaps = 28/349 (8%)

Query: 190 KMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKG 249
           +M  LG V ++ ++N  I     +    KV  +  EM  K +  +  TY  LIA +CK+G
Sbjct: 505 EMENLGFVPSVEMFNSFITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGWCKEG 564

Query: 250 MHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREAR---------RLFRDIKGAT 300
             ++A  +   M  +G+ P++   + L+  F REG++ EA           + +D   +T
Sbjct: 565 NLHDACILYFEMVEKGLKPNLFICSVLVSCFYREGKVDEANLVLQKLADTDMIQDCSAST 624

Query: 301 PN-------------------HVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTY 341
            N                    + +  +I G C+   + +A  L E +  KG  P   TY
Sbjct: 625 LNIGKVAHIIESLAGGNHQSAKIMWNIVILGLCKLGRVADARNLFEDLKVKGFIPDNFTY 684

Query: 342 NSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLE 401
           +S++      G I  A  L +EM   ++ P+ VT N+LI   CK  + + A+ + N++  
Sbjct: 685 SSLIHGCSASGSIDLAFGLRDEMLSARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQS 744

Query: 402 AGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEA 461
            G+  +  TY  LI G CK      A +L   M+  G  P+  +Y+ L+ G C +   E 
Sbjct: 745 KGISPNAITYNTLIDGHCKDGNTTEAFKLKQKMIKEGIQPTVFTYTILIHGLCTQGYMEE 804

Query: 462 LLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGIL 510
            +KLLD+ +   +  +   Y  LI+ + +   +    +L+N M   G+L
Sbjct: 805 AIKLLDQMIENNVDPNFITYWTLIQGYARCGNMKAITKLYNEMHICGLL 853



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 105/403 (26%), Positives = 180/403 (44%), Gaps = 51/403 (12%)

Query: 27  AKLLNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIH 86
           AK L+PN  +     A      NL++ C +      +F+  E  +   K +L     ++ 
Sbjct: 543 AKGLSPNTVTYGALIAGWCKEGNLHDACIL------YFEMVEKGL---KPNLFICSVLVS 593

Query: 87  ILTKNKHFKSAQNMLEKIALRDFLS--TPSVLN--ALVKIHDDPDGNSHV---LSWLVIF 139
              +      A  +L+K+A  D +   + S LN   +  I +   G +H    + W ++ 
Sbjct: 594 CFYREGKVDEANLVLQKLADTDMIQDCSASTLNIGKVAHIIESLAGGNHQSAKIMWNIVI 653

Query: 140 YANLKMTQ--DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVV 197
               K+ +  D   +F+ ++V   +P     + L++  +     D+ + +  +M+   + 
Sbjct: 654 LGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSIDLAFGLRDEMLSARLT 713

Query: 198 ANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAV 257
            NI  YN LI+  CKS +V +   L  +++ K +  +  TYNTLI  +CK G   EA  +
Sbjct: 714 PNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNTTEAFKL 773

Query: 258 QDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCR 315
           + +M +EGI P + TY  LIHG C +G M EA +L   +      PN +TY TLI GY R
Sbjct: 774 KQKMIKEGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQMIENNVDPNFITYWTLIQGYAR 833

Query: 316 ANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMN--EKKIAPDN 373
             +++   +L   M   G+ P   T           G ++ A  ++N  N     + PD 
Sbjct: 834 CGNMKAITKLYNEMHICGLLPANWT-----------GHVKQAEPVVNSKNLSVGHVEPD- 881

Query: 374 VTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIH 416
                     CKI      +++KNR  E G  ++ + Y AL +
Sbjct: 882 ----------CKI------IRIKNRTSE-GSTVNLYAYYALCY 907



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 92/366 (25%), Positives = 166/366 (45%), Gaps = 16/366 (4%)

Query: 83  TMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDG---NSHVLSWLVIF 139
           T I I  +N  F  +  M        F++  S     +++     G   N+     L+  
Sbjct: 500 TQIRIEMENLGFVPSVEMFNSFITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAG 559

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
           +       D   ++ +M    L P+L  C+VL++   ++   D    V +K+        
Sbjct: 560 WCKEGNLHDACILYFEMVEKGLKPNLFICSVLVSCFYREGKVDEANLVLQKLADTD---- 615

Query: 200 IHLYNVLIHACCKSS-DVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQ 258
                 +I  C  S+ ++ KV  ++  +   + ++    +N +I   CK G   +A  + 
Sbjct: 616 ------MIQDCSASTLNIGKVAHIIESLAGGNHQSAKIMWNIVILGLCKLGRVADARNLF 669

Query: 259 DRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGA--TPNHVTYTTLIDGYCRA 316
           + ++ +G  PD  TY+SLIHG    G +  A  L  ++  A  TPN VTY +LI G C++
Sbjct: 670 EDLKVKGFIPDNFTYSSLIHGCSASGSIDLAFGLRDEMLSARLTPNIVTYNSLIYGLCKS 729

Query: 317 NDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTC 376
            ++  A+ L   + +KG+ P  +TYN+++   CK+G   +A +L  +M ++ I P   T 
Sbjct: 730 CNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNTTEAFKLKQKMIKEGIQPTVFTY 789

Query: 377 NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD 436
             LI+  C  G    A+K+ ++M+E  +  +  TY  LI G+ +   M    +L   M  
Sbjct: 790 TILIHGLCTQGYMEEAIKLLDQMIENNVDPNFITYWTLIQGYARCGNMKAITKLYNEMHI 849

Query: 437 AGFSPS 442
            G  P+
Sbjct: 850 CGLLPA 855


>gi|449483905|ref|XP_004156728.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g40400-like [Cucumis sativus]
          Length = 636

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 142/484 (29%), Positives = 234/484 (48%), Gaps = 5/484 (1%)

Query: 62  AFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNML-EKIAL-RDFLSTPSVLNAL 119
           AFF W +  + + + S  ++  +IHIL  ++ F  A   L E I L +D  S+  V   L
Sbjct: 121 AFFNWVKYDL-DIRLSSHNYCLIIHILAWSRQFPLAMKFLSELIELSKDVSSSEDVFQNL 179

Query: 120 VKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDR 179
           V   +  + N  +   L+  Y  L +  +    F +M     +P++ AC  +LN LAK +
Sbjct: 180 VLCTEHCNWNPVIFEMLIKAYVKLDLIHESYWSFKKMVKLGFVPNVIACNCILNGLAKMK 239

Query: 180 LTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYN 239
                W++Y++M ++GV +N + +N+L +  C+  DV+K+   L +ME +    D+ TYN
Sbjct: 240 SDAQCWELYEEMGRIGVHSNAYTFNILTYVLCRDGDVNKINGFLEKMEEEGFDPDVVTYN 299

Query: 240 TLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--K 297
           TLI  Y ++G   +A  +   M R G+ PD+V+Y SL+ G CR GR+REA +LF  +  +
Sbjct: 300 TLIDSYVRRGRLEDAFYLYKIMYRRGVMPDLVSYTSLMRGLCRLGRVREAHQLFHRMIDR 359

Query: 298 GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDA 357
           G  P+ V Y TLI  YC+   L+EA  L   M   G++P   T   ++    +EGR+  A
Sbjct: 360 GMDPDVVLYNTLIGAYCKDGMLQEARSLLHEMIGIGIHPDSFTCRILVEGYGREGRLISA 419

Query: 358 NRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHG 417
             L+ E+ +  +   +     LI + C+     +A  +  R+LE     D   Y  LI  
Sbjct: 420 LNLVVEIQKLGVTVAHDIYKYLIISLCREDRPFAAKSLLERILEDSFQPDSDIYNKLIES 479

Query: 418 FCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVD 477
           FC++  +  A  L   M++  + P+  +Y  L+   C  N       L+ E V   +  D
Sbjct: 480 FCRSNNVSEALLLKLEMINRNYKPTTDTYKSLIHCMCEINRSVDGEGLMVEMVESEVIPD 539

Query: 478 VSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILD 537
             + RAL+  +CK+   D A+ L      +    DS  + SL   Y   G      ++ D
Sbjct: 540 HEICRALVNGYCKEGNADKAESLLVSFAQDFQFFDSESFNSLVKVYRDVGNETKLMELQD 599

Query: 538 DMYR 541
            M +
Sbjct: 600 RMLK 603



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 89/338 (26%), Positives = 152/338 (44%), Gaps = 39/338 (11%)

Query: 125 DPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMV 184
           DPD  ++  + L+  Y      +D   ++  M    +MP L + T L+  L +       
Sbjct: 292 DPDVVTY--NTLIDSYVRRGRLEDAFYLYKIMYRRGVMPDLVSYTSLMRGLCRLGRVREA 349

Query: 185 WKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIAL 244
            +++ +M+  G+  ++ LYN LI A CK   + +   LL EM    +  D FT   L+  
Sbjct: 350 HQLFHRMIDRGMDPDVVLYNTLIGAYCKDGMLQEARSLLHEMIGIGIHPDSFTCRILVEG 409

Query: 245 YCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPN 302
           Y ++G    AL +   +++ G++     Y  LI   CRE R   A+ L   I      P+
Sbjct: 410 YGREGRLISALNLVVEIQKLGVTVAHDIYKYLIISLCREDRPFAAKSLLERILEDSFQPD 469

Query: 303 HVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLN 362
              Y  LI+ +CR+N++ EAL L+  M  +   P   TY S++  +C+  R  D   L+ 
Sbjct: 470 SDIYNKLIESFCRSNNVSEALLLKLEMINRNYKPTTDTYKSLIHCMCEINRSVDGEGLMV 529

Query: 363 EMNEKKIAPDNVTCNTLINAYCK-----------------------------------IG 387
           EM E ++ PD+  C  L+N YCK                                   +G
Sbjct: 530 EMVESEVIPDHEICRALVNGYCKEGNADKAESLLVSFAQDFQFFDSESFNSLVKVYRDVG 589

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMD 425
           +    M++++RML+AG + +  T + +IHG  K+  ++
Sbjct: 590 NETKLMELQDRMLKAGFLPNSLTCRYIIHGIWKSMRLN 627



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 83/331 (25%), Positives = 149/331 (45%), Gaps = 2/331 (0%)

Query: 238 YNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK 297
           +  LI  Y K  + +E+     +M + G  P+++  N +++G  +     +   L+ ++ 
Sbjct: 193 FEMLIKAYVKLDLIHESYWSFKKMVKLGFVPNVIACNCILNGLAKMKSDAQCWELYEEMG 252

Query: 298 --GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIR 355
             G   N  T+  L    CR  D+ +     E M  +G  P VVTYN+++    + GR+ 
Sbjct: 253 RIGVHSNAYTFNILTYVLCRDGDVNKINGFLEKMEEEGFDPDVVTYNTLIDSYVRRGRLE 312

Query: 356 DANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALI 415
           DA  L   M  + + PD V+  +L+   C++G    A ++ +RM++ G+  D   Y  LI
Sbjct: 313 DAFYLYKIMYRRGVMPDLVSYTSLMRGLCRLGRVREAHQLFHRMIDRGMDPDVVLYNTLI 372

Query: 416 HGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLC 475
             +CK   +  A+ LL  M+  G  P   +   LV+GY  +    + L L+ E    G+ 
Sbjct: 373 GAYCKDGMLQEARSLLHEMIGIGIHPDSFTCRILVEGYGREGRLISALNLVVEIQKLGVT 432

Query: 476 VDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDI 535
           V   +Y+ LI   C++++   A+ L   +  +    DS IY  L  ++ R+        +
Sbjct: 433 VAHDIYKYLIISLCREDRPFAAKSLLERILEDSFQPDSDIYNKLIESFCRSNNVSEALLL 492

Query: 536 LDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
             +M  R    T   Y+S      + N  +D
Sbjct: 493 KLEMINRNYKPTTDTYKSLIHCMCEINRSVD 523



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 51/101 (50%)

Query: 190 KMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKG 249
           +MV+  V+ +  +   L++  CK  + DK E LL          D  ++N+L+ +Y   G
Sbjct: 530 EMVESEVIPDHEICRALVNGYCKEGNADKAESLLVSFAQDFQFFDSESFNSLVKVYRDVG 589

Query: 250 MHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREAR 290
              + + +QDRM + G  P+ +T   +IHG  +  R+ + R
Sbjct: 590 NETKLMELQDRMLKAGFLPNSLTCRYIIHGIWKSMRLNKQR 630


>gi|449450197|ref|XP_004142850.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g40400-like [Cucumis sativus]
          Length = 632

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 142/484 (29%), Positives = 234/484 (48%), Gaps = 5/484 (1%)

Query: 62  AFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNML-EKIAL-RDFLSTPSVLNAL 119
           AFF W +  + + + S  ++  +IHIL  ++ F  A   L E I L +D  S+  V   L
Sbjct: 117 AFFNWVKYDL-DIRLSSHNYCLIIHILAWSRQFPLAMKFLSELIELSKDVSSSEDVFQNL 175

Query: 120 VKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDR 179
           V   +  + N  +   L+  Y  L +  +    F +M     +P++ AC  +LN LAK +
Sbjct: 176 VLCTEHCNWNPVIFEMLIKAYVKLDLIHESYWSFKKMVKLGFVPNVIACNCILNGLAKMK 235

Query: 180 LTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYN 239
                W++Y++M ++GV +N + +N+L +  C+  DV+K+   L +ME +    D+ TYN
Sbjct: 236 SDAQCWELYEEMGRIGVHSNAYTFNILTYVLCRDGDVNKINGFLEKMEEEGFDPDVVTYN 295

Query: 240 TLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--K 297
           TLI  Y ++G   +A  +   M R G+ PD+V+Y SL+ G CR GR+REA +LF  +  +
Sbjct: 296 TLIDSYVRRGRLEDAFYLYKIMYRRGVMPDLVSYTSLMRGLCRLGRVREAHQLFHRMIDR 355

Query: 298 GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDA 357
           G  P+ V Y TLI  YC+   L+EA  L   M   G++P   T   ++    +EGR+  A
Sbjct: 356 GMDPDVVLYNTLIGAYCKDGMLQEARSLLHEMIGIGIHPDSFTCRILVEGYGREGRLISA 415

Query: 358 NRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHG 417
             L+ E+ +  +   +     LI + C+     +A  +  R+LE     D   Y  LI  
Sbjct: 416 LNLVVEIQKLGVTVAHDIYKYLIISLCREDRPFAAKSLLERILEDSFQPDSDIYNKLIES 475

Query: 418 FCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVD 477
           FC++  +  A  L   M++  + P+  +Y  L+   C  N       L+ E V   +  D
Sbjct: 476 FCRSNNVSEALLLKLEMINRNYKPTTDTYKSLIHCMCEINRSVDGEGLMVEMVESEVIPD 535

Query: 478 VSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILD 537
             + RAL+  +CK+   D A+ L      +    DS  + SL   Y   G      ++ D
Sbjct: 536 HEICRALVNGYCKEGNADKAESLLVSFAKDFQFFDSESFNSLVKVYRDVGNETKLMELQD 595

Query: 538 DMYR 541
            M +
Sbjct: 596 RMLK 599



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 89/338 (26%), Positives = 152/338 (44%), Gaps = 39/338 (11%)

Query: 125 DPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMV 184
           DPD  ++  + L+  Y      +D   ++  M    +MP L + T L+  L +       
Sbjct: 288 DPDVVTY--NTLIDSYVRRGRLEDAFYLYKIMYRRGVMPDLVSYTSLMRGLCRLGRVREA 345

Query: 185 WKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIAL 244
            +++ +M+  G+  ++ LYN LI A CK   + +   LL EM    +  D FT   L+  
Sbjct: 346 HQLFHRMIDRGMDPDVVLYNTLIGAYCKDGMLQEARSLLHEMIGIGIHPDSFTCRILVEG 405

Query: 245 YCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPN 302
           Y ++G    AL +   +++ G++     Y  LI   CRE R   A+ L   I      P+
Sbjct: 406 YGREGRLISALNLVVEIQKLGVTVAHDIYKYLIISLCREDRPFAAKSLLERILEDSFQPD 465

Query: 303 HVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLN 362
              Y  LI+ +CR+N++ EAL L+  M  +   P   TY S++  +C+  R  D   L+ 
Sbjct: 466 SDIYNKLIESFCRSNNVSEALLLKLEMINRNYKPTTDTYKSLIHCMCEINRSVDGEGLMV 525

Query: 363 EMNEKKIAPDNVTCNTLINAYCK-----------------------------------IG 387
           EM E ++ PD+  C  L+N YCK                                   +G
Sbjct: 526 EMVESEVIPDHEICRALVNGYCKEGNADKAESLLVSFAKDFQFFDSESFNSLVKVYRDVG 585

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMD 425
           +    M++++RML+AG + +  T + +IHG  K+  ++
Sbjct: 586 NETKLMELQDRMLKAGFLPNSLTCRYIIHGIWKSMRLN 623



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 83/331 (25%), Positives = 149/331 (45%), Gaps = 2/331 (0%)

Query: 238 YNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK 297
           +  LI  Y K  + +E+     +M + G  P+++  N +++G  +     +   L+ ++ 
Sbjct: 189 FEMLIKAYVKLDLIHESYWSFKKMVKLGFVPNVIACNCILNGLAKMKSDAQCWELYEEMG 248

Query: 298 --GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIR 355
             G   N  T+  L    CR  D+ +     E M  +G  P VVTYN+++    + GR+ 
Sbjct: 249 RIGVHSNAYTFNILTYVLCRDGDVNKINGFLEKMEEEGFDPDVVTYNTLIDSYVRRGRLE 308

Query: 356 DANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALI 415
           DA  L   M  + + PD V+  +L+   C++G    A ++ +RM++ G+  D   Y  LI
Sbjct: 309 DAFYLYKIMYRRGVMPDLVSYTSLMRGLCRLGRVREAHQLFHRMIDRGMDPDVVLYNTLI 368

Query: 416 HGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLC 475
             +CK   +  A+ LL  M+  G  P   +   LV+GY  +    + L L+ E    G+ 
Sbjct: 369 GAYCKDGMLQEARSLLHEMIGIGIHPDSFTCRILVEGYGREGRLISALNLVVEIQKLGVT 428

Query: 476 VDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDI 535
           V   +Y+ LI   C++++   A+ L   +  +    DS IY  L  ++ R+        +
Sbjct: 429 VAHDIYKYLIISLCREDRPFAAKSLLERILEDSFQPDSDIYNKLIESFCRSNNVSEALLL 488

Query: 536 LDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
             +M  R    T   Y+S      + N  +D
Sbjct: 489 KLEMINRNYKPTTDTYKSLIHCMCEINRSVD 519



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 51/101 (50%)

Query: 190 KMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKG 249
           +MV+  V+ +  +   L++  CK  + DK E LL          D  ++N+L+ +Y   G
Sbjct: 526 EMVESEVIPDHEICRALVNGYCKEGNADKAESLLVSFAKDFQFFDSESFNSLVKVYRDVG 585

Query: 250 MHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREAR 290
              + + +QDRM + G  P+ +T   +IHG  +  R+ + R
Sbjct: 586 NETKLMELQDRMLKAGFLPNSLTCRYIIHGIWKSMRLNKQR 626


>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 754

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 125/403 (31%), Positives = 198/403 (49%), Gaps = 3/403 (0%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           + + M  + L+P     T ++    ++   D   ++ ++MV+ G   +    NV++H  C
Sbjct: 211 MLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFC 270

Query: 212 KSSDVDKVEKLLCEMEFKD-VRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           K   V+     + EM  +D    D +T+NTL+   CK G    A+ + D M +EG  PD+
Sbjct: 271 KEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDV 330

Query: 271 VTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
            TYNS+I G C+ G ++EA      +  +  +PN VTY TLI   C+ N +EEA  L  V
Sbjct: 331 YTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARV 390

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           + +KG+ P V T+NS+++ LC     R A  L  EM  K   PD  T N LI++ C  G 
Sbjct: 391 LTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGK 450

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
              A+ +  +M  +G      TY  LI GFCKA ++  A+E+   M   G S +  +Y+ 
Sbjct: 451 LDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNT 510

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG 508
           L+DG C     E   +L+D+ +  G   D   Y +L+  FC+   +  A  +   M  NG
Sbjct: 511 LIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNG 570

Query: 509 ILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIY 551
              D V Y +L     +AG  +  S +L  +  + + +T   Y
Sbjct: 571 CEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAY 613



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 132/466 (28%), Positives = 229/466 (49%), Gaps = 13/466 (2%)

Query: 84  MIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPD------GNSHVLSWLV 137
           + ++ +K  +F     + E+I LR  L      + + KI +D        G S  L  L+
Sbjct: 69  LFNLASKKPNFSPEPALYEEILLR--LGRSGSFDDMRKILEDMKNSGCEMGTSPFL-ILI 125

Query: 138 IFYANLKMTQDGLQVFDQM-RVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGV 196
             YA  ++  + L V   M     L P  H    +LN L       +V   + KM   G+
Sbjct: 126 ESYAQFELQDEILGVVHWMIDDFGLKPDTHFYNRMLNLLVDGNNLKLVEIAHAKMSVWGI 185

Query: 197 VANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALA 256
             ++  +NVLI A C++  +     +L +M    +  D  T+ T++  Y ++G    AL 
Sbjct: 186 KPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALR 245

Query: 257 VQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK---GATPNHVTYTTLIDGY 313
           ++++M   G S   V+ N ++HGFC+EGR+ +A    +++    G  P+  T+ TL++G 
Sbjct: 246 IREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGL 305

Query: 314 CRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDN 373
           C+A  ++ A+ + +VM  +G  P V TYNS++  LCK G +++A   L++M  +  +P+ 
Sbjct: 306 CKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNT 365

Query: 374 VTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFG 433
           VT NTLI+  CK      A ++   +   G++ D  T+ +LI G C  +   +A EL   
Sbjct: 366 VTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEE 425

Query: 434 MLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEK 493
           M   G  P   +Y+ L+D  C+K   +  L +L +    G    V  Y  LI  FCK  K
Sbjct: 426 MRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANK 485

Query: 494 VDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
           +  A+ +F+ M+ +G+  +SV Y +L     ++   +  S ++D M
Sbjct: 486 IREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQM 531



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 115/387 (29%), Positives = 186/387 (48%), Gaps = 4/387 (1%)

Query: 147 QDGLQVFDQMRVHN-LMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNV 205
           +D L    +M   +   P  +    L+N L K        ++   M+Q G   +++ YN 
Sbjct: 276 EDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNS 335

Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
           +I   CK  +V +  + L +M  +D   +  TYNTLI+  CK+    EA  +   +  +G
Sbjct: 336 VISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKG 395

Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEAL 323
           I PD+ T+NSLI G C     R A  LF ++  KG  P+  TY  LID  C    L+EAL
Sbjct: 396 ILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEAL 455

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
            + + M   G    V+TYN+++   CK  +IR+A  + +EM    ++ ++VT NTLI+  
Sbjct: 456 NMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGL 515

Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY 443
           CK      A ++ ++M+  G   D+FTY +L+  FC+  ++  A +++  M   G  P  
Sbjct: 516 CKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDI 575

Query: 444 CSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF-N 502
            +Y  L+ G C     E   KLL     +G+ +    Y  +I+   +K K   A  LF  
Sbjct: 576 VTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAINLFRE 635

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEP 529
           +++ N    D+V Y  +       G P
Sbjct: 636 MLEQNEAAPDAVSYRIVFRGLCNGGGP 662



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 126/291 (43%), Gaps = 41/291 (14%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           ++FD+M VH                                   GV  N   YN LI   
Sbjct: 491 EIFDEMEVH-----------------------------------GVSRNSVTYNTLIDGL 515

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           CKS  V+   +L+ +M  +  + D FTYN+L+  +C+ G   +A  +   M   G  PDI
Sbjct: 516 CKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDI 575

Query: 271 VTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL-RE 327
           VTY +LI G C+ GR+  A +L R I  KG       Y  +I G  R     EA+ L RE
Sbjct: 576 VTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAINLFRE 635

Query: 328 VMAAKGVYPGVVTYNSILRKLCK-EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKI 386
           ++      P  V+Y  + R LC   G IR+A   L E+ EK   P+  +   L      +
Sbjct: 636 MLEQNEAAPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTL 695

Query: 387 GDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA 437
               + +K+ N +++     ++    +++ G  K ++   A   L G+LD+
Sbjct: 696 SMEETLVKLVNMVMQKARFSEEEV--SMVKGLLKIRKFQDALATLGGVLDS 744


>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
 gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 598

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 119/384 (30%), Positives = 196/384 (51%), Gaps = 5/384 (1%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           ++G +  + M  H  +P +  CT L+    +   T    K+ + +   G V ++  YNV+
Sbjct: 119 EEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVM 178

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           I   CK+ +++    +L  M    V  D+ TYNT++   C  G   +A+ V DRM +   
Sbjct: 179 ISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDC 235

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALR 324
            PD++TY  LI   CR+  +  A +L  +++  G TP+ VTY  L++G C+   L+EA++
Sbjct: 236 YPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIK 295

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
               M + G  P V+T+N ILR +C  GR  DA +LL +M  K  +P  VT N LIN  C
Sbjct: 296 FLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLC 355

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           + G    A+ +  +M + G   +  +Y  L+HGFCK K+MD A E L  M+  G  P   
Sbjct: 356 RKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIV 415

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
           +Y+ ++   C     E  +++L++  S+G    +  Y  +I    K  K   A +L + M
Sbjct: 416 TYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEM 475

Query: 505 QGNGILGDSVIYTSLAYAYWRAGE 528
           +   +  D++ Y+SL     R G+
Sbjct: 476 RAKDLKPDTITYSSLVGGLSREGK 499



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 122/410 (29%), Positives = 199/410 (48%), Gaps = 20/410 (4%)

Query: 185 WKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIAL 244
           +K  + MV  G V +I     LI   C+     K  K+L  +E      D+ TYN +I+ 
Sbjct: 122 FKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISG 181

Query: 245 YCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA-----RRLFRDIKGA 299
           YCK G    AL+V DRM    +SPD+VTYN+++   C  G++++A     R L RD    
Sbjct: 182 YCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRD---C 235

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
            P+ +TYT LI+  CR + +  A++L + M  +G  P VVTYN ++  +CKEGR+ +A +
Sbjct: 236 YPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIK 295

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
            LN+M      P+ +T N ++ + C  G    A K+   ML  G      T+  LI+  C
Sbjct: 296 FLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLC 355

Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
           +   +  A ++L  M   G  P+  SY+ L+ G+C +   +  ++ L+  VSRG   D+ 
Sbjct: 356 RKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIV 415

Query: 480 VYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
            Y  ++   CK  KV+ A  + N +   G     + Y ++     +AG+      +LD+M
Sbjct: 416 TYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEM 475

Query: 540 YRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKEMQLR 589
             + L      Y S     +++ +         VD  +   H F+ M +R
Sbjct: 476 RAKDLKPDTITYSSLVGGLSREGK---------VDEAIKFFHEFERMGIR 516



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 100/369 (27%), Positives = 184/369 (49%), Gaps = 2/369 (0%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           +  ++V D+M   +  P +   T+L+ +  +D       K+  +M   G   ++  YNVL
Sbjct: 221 KQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVL 280

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           ++  CK   +D+  K L +M     + ++ T+N ++   C  G   +A  +   M R+G 
Sbjct: 281 VNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGF 340

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALR 324
           SP +VT+N LI+  CR+G +  A  +   +   G  PN ++Y  L+ G+C+   ++ A+ 
Sbjct: 341 SPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIE 400

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
             E M ++G YP +VTYN++L  LCK+G++ DA  +LN+++ K  +P  +T NT+I+   
Sbjct: 401 YLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLA 460

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           K G T  A+K+ + M    L  D  TY +L+ G  +  ++D A +        G  P+  
Sbjct: 461 KAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAV 520

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
           +++ ++ G C     +  +  L   ++RG   + + Y  LI     +     A  L N +
Sbjct: 521 TFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNEL 580

Query: 505 QGNGILGDS 513
              G++  S
Sbjct: 581 CNKGLMKKS 589



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 100/365 (27%), Positives = 178/365 (48%), Gaps = 6/365 (1%)

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
           V +N HL  ++     ++ ++++  K L  M +     D+    TLI  +C+ G   +A 
Sbjct: 103 VESNNHLRQMV-----RTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAA 157

Query: 256 AVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCR 315
            + + +E  G  PD++TYN +I G+C+ G +  A  +  D    +P+ VTY T++   C 
Sbjct: 158 KILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVL-DRMSVSPDVVTYNTILRSLCD 216

Query: 316 ANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVT 375
           +  L++A+ + + M  +  YP V+TY  ++   C++  +  A +LL+EM ++   PD VT
Sbjct: 217 SGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVT 276

Query: 376 CNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGML 435
            N L+N  CK G    A+K  N M  +G   +  T+  ++   C       A++LL  ML
Sbjct: 277 YNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADML 336

Query: 436 DAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVD 495
             GFSPS  +++ L++  C K      + +L++    G   +   Y  L+  FCK++K+D
Sbjct: 337 RKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMD 396

Query: 496 YAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFS 555
            A      M   G   D V Y ++  A  + G+ +   +IL+ +  +     L  Y +  
Sbjct: 397 RAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVI 456

Query: 556 ASYAK 560
              AK
Sbjct: 457 DGLAK 461


>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
 gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
          Length = 1116

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 131/433 (30%), Positives = 208/433 (48%), Gaps = 45/433 (10%)

Query: 152  VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
            +F++M   NL P +     L++ L K    +    +   M  LGV  N+  YN L+H  C
Sbjct: 589  LFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLC 648

Query: 212  KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYC------------------------- 246
            KS  +++  + L EM       D  TY +L+   C                         
Sbjct: 649  KSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTV 708

Query: 247  ----------KKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI 296
                      K G   +A+ V + M  +G  PD+VTYN+LI   C+ G + EARRL  D+
Sbjct: 709  TYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDM 768

Query: 297  KG-----ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKG--VYPGVVTYNSILRKLC 349
                     PN VTY+ LI+G C+   ++EA  L + M  K   V P ++TYNS L  LC
Sbjct: 769  SSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLC 828

Query: 350  KEGRIRDANRLLNEMNEK--KIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLD 407
            K+  + +A  L+  + +   +++PD VT +TLI+  CK G T  A  V + M+  G + +
Sbjct: 829  KQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPN 888

Query: 408  QFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLD 467
              TY  L++G CK  +M+ A  ++  M+D G +P   +YS LVD +C  ++ +  L+LL 
Sbjct: 889  VVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLH 948

Query: 468  EFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ-GNGILGDSVIYTSLAYAYWRA 526
               SRG   +V  + ++I   CK ++   A ++F+ M   +G+  D + Y +L    +R 
Sbjct: 949  GMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRT 1008

Query: 527  GEPKACSDILDDM 539
            G       +LD M
Sbjct: 1009 GWAGQAEVLLDAM 1021



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 125/426 (29%), Positives = 206/426 (48%), Gaps = 9/426 (2%)

Query: 144 KMTQDGLQVFDQMRVHNL--MPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIH 201
            MT +  ++   +R  +L   P     + L++ L K    D    V+  M+  G V N+ 
Sbjct: 337 SMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVI 396

Query: 202 LYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRM 261
            YN L++  CK+  +++   ++  M  K V  D+ TY+ L+  +CK     EAL +   M
Sbjct: 397 TYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGM 456

Query: 262 EREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK---GATPNHVTYTTLIDGYCRAND 318
              G +P++VT+NS+I G C+  R  EA ++F D+    G  P+ +TY TLIDG  R   
Sbjct: 457 ASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGR 516

Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT 378
             +A  L + M     Y     +N  +  L K G +  A ++ N M E ++ PD VT N 
Sbjct: 517 AGQAEALLDAMPDPDTY----AFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNI 572

Query: 379 LINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAG 438
           LI   CK G+   A  +   M+   L  D  T+ ALI G CKA +++ A+++L  M + G
Sbjct: 573 LIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLG 632

Query: 439 FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQ 498
             P+  +Y+ LV G C     E   + L+E VS G   D   Y +L+   C+  + D A 
Sbjct: 633 VPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDAL 692

Query: 499 RLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASY 558
           +L + ++  G   D+V Y  L    W++G+ +    +L++M  +     +  Y +   S 
Sbjct: 693 QLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSL 752

Query: 559 AKDNEI 564
            K  ++
Sbjct: 753 CKAGDL 758



 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 113/345 (32%), Positives = 185/345 (53%), Gaps = 8/345 (2%)

Query: 203 YNVLIHACCKSSDVDK-VEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRM 261
           YN+++ + C++ +  + +E    EM    V   + TYNT+I   CK       + + + +
Sbjct: 183 YNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEEL 242

Query: 262 EREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDL 319
              G  PD+VTYN+LI   C+ G + EARRL  D+  +   PN VTY+ LI+G C+   +
Sbjct: 243 VERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRI 302

Query: 320 EEALRLREVMAAKG--VYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEK--KIAPDNVT 375
           +EA  L + M  K   V P ++TYNS L  LCK+    +A  L+  + +   +++PD VT
Sbjct: 303 DEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVT 362

Query: 376 CNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGML 435
            +TLI+  CK G    A  V + M+  G + +  TY AL++G CKA +M+ A  ++  M+
Sbjct: 363 FSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMV 422

Query: 436 DAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVD 495
           D G +P   +YS LVD +C  +  +  L+LL    SRG   +V  + ++I   CK ++  
Sbjct: 423 DKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSG 482

Query: 496 YAQRLFNLMQ-GNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
            A ++F+ M   +G++ D + Y +L    +R G       +LD M
Sbjct: 483 EAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAM 527



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 126/469 (26%), Positives = 216/469 (46%), Gaps = 12/469 (2%)

Query: 126 PDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVW 185
           PD +++  +  +   + L      LQV+++M    L+P      +L+    K    +   
Sbjct: 528 PDPDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQAS 587

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
            ++++MV   +  ++  +  LI   CK+  V+    +L  M    V  ++ TYN L+   
Sbjct: 588 ALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGL 647

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNH 303
           CK G   EA    + M   G  PD +TY SL++  CR  R  +A +L  ++K  G  P+ 
Sbjct: 648 CKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDT 707

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
           VTY  L+DG  ++   E+A+ + E M  KG +P VVTYN+++  LCK G + +A RL  +
Sbjct: 708 VTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGD 767

Query: 364 MNEKK---IAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAG--LMLDQFTYKALIHGF 418
           M+ +      P+ VT + LIN  CK+G    A ++   M+     ++ +  TY + + G 
Sbjct: 768 MSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGL 827

Query: 419 CKAKEMDIAKELLFGMLDAGF--SPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCV 476
           CK   M  A EL+  + D     SP   ++S L+DG C     +    + D+ ++ G   
Sbjct: 828 CKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVP 887

Query: 477 DVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDIL 536
           +V  Y  L+   CK +K++ A  +   M   G+  D + Y+ L  A+ +A       ++L
Sbjct: 888 NVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELL 947

Query: 537 DDMYRRRLMITLKIYRSFSASYAKDN---EILDLFWSHVVDRGLMSKHI 582
             M  R     +  + S      K +   E   +F    +  GL    I
Sbjct: 948 HGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKI 996



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 128/465 (27%), Positives = 211/465 (45%), Gaps = 39/465 (8%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           ++   S L+          +   VFD M     +P++     L+N L K    +    + 
Sbjct: 359 DTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMI 418

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
           + MV  GV  ++  Y+VL+ A CK+S VD+  +LL  M  +    ++ T+N++I   CK 
Sbjct: 419 ESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKS 478

Query: 249 GMHYEALAVQDRME-REGISPDIVTYNSLIHGFCREGRMREARRLF-------------- 293
               EA  + D M  + G+ PD +TY +LI G  R GR  +A  L               
Sbjct: 479 DRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPDPDTYAFNCC 538

Query: 294 -------RDIKGA------------TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGV 334
                   D+  A             P+ VT+  LI G C+A + E+A  L E M AK +
Sbjct: 539 INGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNL 598

Query: 335 YPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMK 394
            P V+T+ +++  LCK G++  A  +L+ M    + P+ VT N L++  CK G    A +
Sbjct: 599 QPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQ 658

Query: 395 VKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYC 454
               M+ +G + D  TY +L++  C+A   D A +L+  +   G+ P   +Y+ LVDG  
Sbjct: 659 FLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLW 718

Query: 455 NKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ---GNGILG 511
                E  + +L+E V +G   DV  Y  LI   CK   ++ A+RL   M        + 
Sbjct: 719 KSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVP 778

Query: 512 DSVIYTSLAYAYWRAGEPKACSDILDDMYRRR--LMITLKIYRSF 554
           + V Y+ L     + G      +++ +M R+   ++  +  Y SF
Sbjct: 779 NVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSF 823



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 104/320 (32%), Positives = 169/320 (52%), Gaps = 7/320 (2%)

Query: 238 YNTLIALYCKKGMHYEALAV-QDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI 296
           YN ++   C+ G    AL + +  M R+G++P IVTYN++I+G C+   +     LF ++
Sbjct: 183 YNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEEL 242

Query: 297 --KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRI 354
             +G  P+ VTY TLID  C+A DLEEA RL   M+++   P VVTY+ ++  LCK GRI
Sbjct: 243 VERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRI 302

Query: 355 RDANRLLNEMNEKK--IAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLML--DQFT 410
            +A  L+ EM  K   + P+ +T N+ ++  CK   TA A ++   + +  L +  D  T
Sbjct: 303 DEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVT 362

Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFV 470
           +  LI G CK  ++D A  +   M+  G+ P+  +Y+ LV+G C  +  E    +++  V
Sbjct: 363 FSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMV 422

Query: 471 SRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPK 530
            +G+  DV  Y  L+  FCK  +VD A  L + M   G   + V + S+     ++    
Sbjct: 423 DKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSG 482

Query: 531 ACSDILDDMYRRRLMITLKI 550
               + DDM  +  ++  KI
Sbjct: 483 EAFQMFDDMALKHGLVPDKI 502



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 147/573 (25%), Positives = 260/573 (45%), Gaps = 94/573 (16%)

Query: 59  LSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNML-EKIALR---DFLSTPS 114
           L   F+ WA +A+P +KH++ S    +++L K+     A ++   ++  R   +  +  +
Sbjct: 93  LGTQFYDWA-AALPGFKHTIFSFNKYLNLLVKSGSPAKAIDLFRSRLPPRCRPNHFTYST 151

Query: 115 VLNALVKIHDDPD-----------GNSHVLSWLVIFYANLKM--TQDGLQVF-DQMRVHN 160
           +L A  K   D +            +  V  + ++  +  +   T   L++F  +M    
Sbjct: 152 LLRATYKAGGDVERTLGFFRRIRSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDG 211

Query: 161 LMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSD----- 215
           + P +     ++N L K        ++++++V+ G   ++  YN LI + CK+ D     
Sbjct: 212 VAPTIVTYNTIINGLCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEAR 271

Query: 216 ------------------------------VDKVEKLLCEMEFK--DVRADLFTYNTLIA 243
                                         +D+  +L+ EM  K  DV  ++ TYN+ + 
Sbjct: 272 RLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLD 331

Query: 244 LYCKKGMHYEALAVQDRMEREG---ISPDIVTYNSLIHGFCREGRMREARRLFRDI--KG 298
             CK+ M  EA  +  R  R+G   +SPD VT+++LI G C+ G++ EA  +F D+   G
Sbjct: 332 GLCKQSMTAEACELM-RSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGG 390

Query: 299 ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDAN 358
             PN +TY  L++G C+A+ +E A  + E M  KGV P V+TY+ ++   CK  R+ +A 
Sbjct: 391 YVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEAL 450

Query: 359 RLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRM-LEAGLMLDQFTYKALIHG 417
            LL+ M  +   P+ VT N++I+  CK   +  A ++ + M L+ GL+ D+ TY  LI G
Sbjct: 451 ELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDG 510

Query: 418 FCKAKEMDIAKELLFGMLDA----------GFS---------------------PSYCSY 446
             +      A+ LL  M D           G S                     P   ++
Sbjct: 511 LFRTGRAGQAEALLDAMPDPDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTF 570

Query: 447 SWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQG 506
           + L+ G C   N E    L +E V++ L  DV  + ALI   CK  +V+ A+ + +LM  
Sbjct: 571 NILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGN 630

Query: 507 NGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
            G+  + V Y +L +   ++G  +     L++M
Sbjct: 631 LGVPPNVVTYNALVHGLCKSGRIEEACQFLEEM 663



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 133/495 (26%), Positives = 225/495 (45%), Gaps = 55/495 (11%)

Query: 80   SHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIF 139
            ++  ++H L K+   + A   LE++     +S+  V          PD  S     LV  
Sbjct: 639  TYNALVHGLCKSGRIEEACQFLEEM-----VSSGCV----------PD--SITYGSLVYA 681

Query: 140  YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
                  T D LQ+  +++     P      +L++ L K   T+    V ++MV  G   +
Sbjct: 682  LCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPD 741

Query: 200  IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVR---ADLFTYNTLIALYCKKGMHYEALA 256
            +  YN LI + CK+ D+++  +L  +M  +  R    ++ TY+ LI   CK G   EA  
Sbjct: 742  VVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARE 801

Query: 257  VQDRMEREG--ISPDIVTYNSLIHGFCREGRMREARRLFRDIKGAT----PNHVTYTTLI 310
            +   M R+   + P+I+TYNS + G C++  M EA  L R ++  +    P+ VT++TLI
Sbjct: 802  LIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLI 861

Query: 311  DGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIA 370
            DG C+    +EA  + + M A G  P VVTYN ++  LCK  ++  A+ ++  M +K + 
Sbjct: 862  DGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVT 921

Query: 371  PDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL 430
            PD +T + L++A+CK      A+++ + M   G   +  T+ ++I G CK+ +   A ++
Sbjct: 922  PDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQM 981

Query: 431  LFGM-LDAGFSPSYCSYSWLVDGYCNKN---NEEALLKLLDEF----------------- 469
               M L  G +P   +Y  L+DG          E LL  + +                  
Sbjct: 982  FDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMPDPDTYAFNCCINGLSKLGD 1041

Query: 470  VSRGL--------CVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAY 521
            VSR L          D   +  LI   CK    + A  LF  M    +  D + + +L  
Sbjct: 1042 VSRALHRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALID 1101

Query: 522  AYWRAGEPKACSDIL 536
               +AG+ +A  DI+
Sbjct: 1102 GLCKAGQVEATWDIM 1116



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 58/229 (25%), Positives = 99/229 (43%), Gaps = 6/229 (2%)

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA-YCKIGD 388
           A  G    + ++N  L  L K G    A  L       +  P++ T +TL+ A Y   GD
Sbjct: 103 ALPGFKHTIFSFNKYLNLLVKSGSPAKAIDLFRSRLPPRCRPNHFTYSTLLRATYKAGGD 162

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFG-MLDAGFSPSYCSYS 447
               +    R+  +   +    Y  ++   C+A E   A E+  G M   G +P+  +Y+
Sbjct: 163 VERTLGFFRRIRSSSRSVAD--YNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYN 220

Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGN 507
            +++G C  N   A ++L +E V RG   DV  Y  LI   CK   ++ A+RL   M   
Sbjct: 221 TIINGLCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSR 280

Query: 508 GILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRR--LMITLKIYRSF 554
             + + V Y+ L     + G      +++ +M R+   ++  +  Y SF
Sbjct: 281 SCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSF 329


>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
 gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
          Length = 577

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 144/496 (29%), Positives = 230/496 (46%), Gaps = 56/496 (11%)

Query: 80  SHWTMIHILTKNKHFKSAQNMLEKIALR----DFLSTPSVLNALVKIHDDPDGNSH---- 131
           ++ ++I  L K K    A  + +++ALR    D +   +++  L++    P  +S     
Sbjct: 58  TYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTM 117

Query: 132 ----------VLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLT 181
                      LS ++   +        +++F  M    L P+    + L++ L K R  
Sbjct: 118 TSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKM 177

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
           D   ++  +M +     +   YNVLI   CKS DV+       EM     + D++TYN L
Sbjct: 178 DCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNIL 237

Query: 242 IALYCKKG---------------------MHY---------------EALAVQDRMEREG 265
           I+ +CK G                     +H                EA+A+ +++   G
Sbjct: 238 ISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANG 297

Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEAL 323
            +P I TYN+L++G C+ GR+ EA  L R I   G TP+ VTYT+LIDG  +     EA 
Sbjct: 298 CTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAY 357

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
           +L + MA +G+    V Y +++R+L + G+I  A+ +   M      PD VT +T+I+  
Sbjct: 358 KLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGL 417

Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY 443
            K G   +A+++   M   GL  ++  Y ALIHG CKA++MD A E+L  M  A  +P  
Sbjct: 418 SKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDT 477

Query: 444 CSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNL 503
            +Y+ L+DG C   + EA     DE +  G   DV  Y  LI  FCK    D A  +F+ 
Sbjct: 478 ITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDD 537

Query: 504 MQGNGILGDSVIYTSL 519
           M  +    + V Y +L
Sbjct: 538 MSSSRCSANVVTYGAL 553



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 120/446 (26%), Positives = 194/446 (43%), Gaps = 38/446 (8%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           ++ + + +++  +   P +     LLN L K    +    + +K+V  G   ++  Y  L
Sbjct: 3   EEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSL 62

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           I    K     +  KL  EM  + +  D   Y  LI    + G   +A +V   M   G 
Sbjct: 63  IDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGC 122

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
            PD+VT +++I G  + GR+  A R+F+ +  +G  PN V Y+ LI G C+A  ++ AL 
Sbjct: 123 VPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALE 182

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           +   M      P  +TYN ++  LCK G +  A    +EM E    PD  T N LI+ +C
Sbjct: 183 MLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFC 242

Query: 385 KIGDTASAMK-------------------------VKNRMLEAGLMLDQ----------- 408
           K G+T +A                            KN+ +E  + L +           
Sbjct: 243 KAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTI 302

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
            TY AL++G CK   ++ A +LL  ++D G +P   +Y+ L+DG   +       KL  E
Sbjct: 303 ATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKE 362

Query: 469 FVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
              RGL +D   Y ALIR   +  K+  A  ++  M  +G + D V  +++     +AG 
Sbjct: 363 MALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGR 422

Query: 529 PKACSDILDDMYRRRLMITLKIYRSF 554
             A   I   M  R L     +Y + 
Sbjct: 423 IGAAVRIFKSMEARGLAPNEVVYSAL 448



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 125/501 (24%), Positives = 209/501 (41%), Gaps = 55/501 (10%)

Query: 77  SLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWL 136
           ++ ++  +++ L K    + A ++L KI   D   TP V+                 + L
Sbjct: 20  TIATYNALLNGLCKMGRLEEAIDLLRKIV--DNGCTPDVVT---------------YTSL 62

Query: 137 VIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGV 196
           +      K + +  ++F +M +  L       T L+  L +         VYK M   G 
Sbjct: 63  IDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGC 122

Query: 197 VANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALA 256
           V ++   + +I    K+  +    ++   ME + +  +   Y+ LI   CK      AL 
Sbjct: 123 VPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALE 182

Query: 257 VQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYC 314
           +  +M++   +PD +TYN LI G C+ G +  AR  F ++   G  P+  TY  LI G+C
Sbjct: 183 MLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFC 242

Query: 315 RAND------------------------------------LEEALRLREVMAAKGVYPGV 338
           +A +                                    +EEA+ L E + A G  P +
Sbjct: 243 KAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTI 302

Query: 339 VTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNR 398
            TYN++L  LCK GR+ +A  LL ++ +    PD VT  +LI+   K   +  A K+   
Sbjct: 303 ATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKE 362

Query: 399 MLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNN 458
           M   GL LD   Y ALI    +  ++  A  +   M   G  P   + S ++DG      
Sbjct: 363 MALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGR 422

Query: 459 EEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTS 518
             A +++     +RGL  +  VY ALI   CK  K+D A  +   M+      D++ Y  
Sbjct: 423 IGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNI 482

Query: 519 LAYAYWRAGEPKACSDILDDM 539
           L     ++G+ +A     D+M
Sbjct: 483 LIDGLCKSGDVEAARAFFDEM 503



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 92/284 (32%), Positives = 127/284 (44%), Gaps = 40/284 (14%)

Query: 285 RMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYN 342
           ++ EA  L   I   G TP   TY  L++G C+   LEEA+ L   +   G  P VVTY 
Sbjct: 1   KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60

Query: 343 SILRKLCKEGRIRDANRLLNEMNEKKIA-------------------------------- 370
           S++  L KE R  +A +L  EM  + +A                                
Sbjct: 61  SLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSH 120

Query: 371 ---PDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIA 427
              PD VT +T+I+   K G   +A+++   M   GL  ++  Y ALIHG CKA++MD A
Sbjct: 121 GCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCA 180

Query: 428 KELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRR 487
            E+L  M  A  +P   +Y+ L+DG C   + EA     DE +  G   DV  Y  LI  
Sbjct: 181 LEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISG 240

Query: 488 FCKKEKVDYAQRLFNLMQGNGILGDSV-IYTSLAYAYWRAGEPK 530
           FCK    D A    +L Q   I G ++ I+T  A   W A   K
Sbjct: 241 FCKAGNTDAASH--SLAQETTINGCTIDIHTYTAIVDWLAKNKK 282



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 80/320 (25%), Positives = 147/320 (45%), Gaps = 19/320 (5%)

Query: 68  ESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPD 127
           E+ +      + ++  ++  L KNK  + A  ++EKI       T +  NAL        
Sbjct: 257 ETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNAL-------- 308

Query: 128 GNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKV 187
                L+ L      +   ++ + +  ++  +   P +   T L++ L K++ +   +K+
Sbjct: 309 -----LNGL----CKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKL 359

Query: 188 YKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCK 247
           +K+M   G+  +   Y  LI    ++  + +   +   M       D+ T +T+I    K
Sbjct: 360 FKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSK 419

Query: 248 KGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGA--TPNHVT 305
            G    A+ +   ME  G++P+ V Y++LIHG C+  +M  A  +   +K A  TP+ +T
Sbjct: 420 AGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTIT 479

Query: 306 YTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMN 365
           Y  LIDG C++ D+E A    + M   G  P V TYN ++   CK G    A  + ++M+
Sbjct: 480 YNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMS 539

Query: 366 EKKIAPDNVTCNTLINAYCK 385
             + + + VT   LI+  CK
Sbjct: 540 SSRCSANVVTYGALISGLCK 559



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 67/221 (30%), Positives = 104/221 (47%)

Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT 378
           +EEA+ L E + A G  P + TYN++L  LCK GR+ +A  LL ++ +    PD VT  +
Sbjct: 2   IEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTS 61

Query: 379 LINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAG 438
           LI+   K   +  A K+   M   GL LD   Y ALI    +  ++  A  +   M   G
Sbjct: 62  LIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHG 121

Query: 439 FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQ 498
             P   + S ++DG        A +++     +RGL  +  VY ALI   CK  K+D A 
Sbjct: 122 CVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCAL 181

Query: 499 RLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
            +   M+      D++ Y  L     ++G+ +A     D+M
Sbjct: 182 EMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEM 222



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 34/146 (23%), Positives = 62/146 (42%), Gaps = 5/146 (3%)

Query: 108 DFLSTPSVLNALVKIHDDPDG-----NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLM 162
           D LS    + A V+I    +      N  V S L+      +     L++  QM+     
Sbjct: 415 DGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCT 474

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
           P      +L++ L K    +     + +M++ G   +++ YN+LI   CK+ + D    +
Sbjct: 475 PDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGV 534

Query: 223 LCEMEFKDVRADLFTYNTLIALYCKK 248
             +M      A++ TY  LI+  CK+
Sbjct: 535 FDDMSSSRCSANVVTYGALISGLCKR 560


>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
 gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
          Length = 460

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 125/383 (32%), Positives = 198/383 (51%), Gaps = 4/383 (1%)

Query: 160 NLMPHLHACTVLLNSL-AKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDK 218
            L P L     LL+ L +K ++ D V K++ +MV++G   ++  Y+ +I+  CK  +   
Sbjct: 5   GLQPTLVTFNTLLSGLCSKAKIMDAV-KLFDEMVKMGHEPDVITYSTIINGLCKMGNTTM 63

Query: 219 VEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIH 278
             +LL +ME K  + ++  YNT+I   CK  +  EA+     M +EGI PD+ TY+S++H
Sbjct: 64  ALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILH 123

Query: 279 GFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYP 336
           GFC  GR+ EA  LF+ +  +   PN VT+T LIDG C+   + EA  + E M  KG+ P
Sbjct: 124 GFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEP 183

Query: 337 GVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVK 396
            V TYN+++   C   ++ +A +L N M+ K  AP+  + N LIN +CK G    A  + 
Sbjct: 184 DVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLL 243

Query: 397 NRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNK 456
             M    L  D FTY  L+ GFC+      A+ELL  M   G  P+  +YS ++DG C  
Sbjct: 244 AEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKH 303

Query: 457 NNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIY 516
            + +   +LL       +  ++ +Y  LI   C   K++ A+ LF+ +   GI    V Y
Sbjct: 304 GHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTY 363

Query: 517 TSLAYAYWRAGEPKACSDILDDM 539
           T +     + G      ++  +M
Sbjct: 364 TVMISGLLKGGLSNEACELFREM 386



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 118/410 (28%), Positives = 205/410 (50%), Gaps = 8/410 (1%)

Query: 115 VLNALVKIHDDPDGNSHVLSWLVIFYANLKM--TQDGLQVFDQMRVHNLMPHLHACTVLL 172
           + + +VK+  +PD    V+++  I     KM  T   LQ+  +M      P++ A   ++
Sbjct: 32  LFDEMVKMGHEPD----VITYSTIINGLCKMGNTTMALQLLKKMEEKGCKPNVVAYNTII 87

Query: 173 NSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVR 232
           +SL KDRL       + +MV+ G+  ++  Y+ ++H  C    V++   L  +M  ++V 
Sbjct: 88  DSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGRVNEATSLFKQMVERNVI 147

Query: 233 ADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRL 292
            +  T+  LI   CKK M  EA  V + M  +G+ PD+ TYN+L+ G+C   +M EA++L
Sbjct: 148 PNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKL 207

Query: 293 FR--DIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
           F   D KG  PN  +Y  LI+G+C++  ++EA  L   M+ K + P + TY++++R  C+
Sbjct: 208 FNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQ 267

Query: 351 EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
            GR ++A  LL EM    + P+ +T + +++  CK G    A ++   M E+ +  + F 
Sbjct: 268 VGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFI 327

Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFV 470
           Y  LI G C   +++ A+EL   +   G  P+  +Y+ ++ G           +L  E  
Sbjct: 328 YTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEACELFREMA 387

Query: 471 SRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLA 520
             G   +   Y  +I+ F +      A RL   M G G   DS  +  L+
Sbjct: 388 VNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGKGFSADSSTFRMLS 437



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 93/314 (29%), Positives = 162/314 (51%), Gaps = 2/314 (0%)

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
           + NL    +   +F QM   N++P+    T+L++ L K R+    W V++ M + G+  +
Sbjct: 125 FCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPD 184

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
           ++ YN L+   C  S +D+ +KL   M+ K    ++ +YN LI  +CK G   EA  +  
Sbjct: 185 VYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLA 244

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRAN 317
            M  + ++PDI TY++L+ GFC+ GR +EA+ L +++   G  PN +TY+ ++DG C+  
Sbjct: 245 EMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHG 304

Query: 318 DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCN 377
            L+EA  L + M    + P +  Y  ++  +C  G++  A  L + +  K I P  VT  
Sbjct: 305 HLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYT 364

Query: 378 TLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA 437
            +I+   K G +  A ++   M   G + +  TY  +I GF +  +   A  L+  M+  
Sbjct: 365 VMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGK 424

Query: 438 GFSPSYCSYSWLVD 451
           GFS    ++  L D
Sbjct: 425 GFSADSSTFRMLSD 438



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 83/289 (28%), Positives = 140/289 (48%), Gaps = 12/289 (4%)

Query: 298 GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDA 357
           G  P  VT+ TL+ G C    + +A++L + M   G  P V+TY++I+  LCK G    A
Sbjct: 5   GLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMA 64

Query: 358 NRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHG 417
            +LL +M EK   P+ V  NT+I++ CK      AM   + M++ G+  D FTY +++HG
Sbjct: 65  LQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHG 124

Query: 418 FCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVD 477
           FC    ++ A  L   M++    P+  +++ L+DG C K        + +    +GL  D
Sbjct: 125 FCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPD 184

Query: 478 VSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILD 537
           V  Y AL+  +C + ++D AQ+LFN+M   G   +   Y  L   + ++G       +L 
Sbjct: 185 VYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLA 244

Query: 538 DMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKEM 586
           +M  + L   +  Y +    + +            V R   ++ + KEM
Sbjct: 245 EMSHKSLTPDIFTYSTLMRGFCQ------------VGRPQEAQELLKEM 281



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 65/148 (43%), Gaps = 2/148 (1%)

Query: 399 MLEAGLMLDQFTYKALIHGFC-KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKN 457
           M + GL     T+  L+ G C KAK MD  K L   M+  G  P   +YS +++G C   
Sbjct: 1   MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVK-LFDEMVKMGHEPDVITYSTIINGLCKMG 59

Query: 458 NEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYT 517
           N    L+LL +   +G   +V  Y  +I   CK   V  A   F+ M   GI  D   Y+
Sbjct: 60  NTTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYS 119

Query: 518 SLAYAYWRAGEPKACSDILDDMYRRRLM 545
           S+ + +   G     + +   M  R ++
Sbjct: 120 SILHGFCNLGRVNEATSLFKQMVERNVI 147


>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1151

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 146/538 (27%), Positives = 243/538 (45%), Gaps = 59/538 (10%)

Query: 80  SHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIF 139
           +++ +IH L K    + A+++  ++ +          N L++                  
Sbjct: 374 TYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIE-----------------G 416

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
           Y  ++  +   ++  +++  NL  + + C  ++N L          +++++M+  G+  N
Sbjct: 417 YYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPN 476

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
           I +Y  ++    K    ++  K+L  M+ + +  D+F YNT+I  +CK G   E  +   
Sbjct: 477 IVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLV 536

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRAN 317
            M  +G+ P++ TY + IHG+CR G M+ A R F ++   G  PN V  T LIDGYC+  
Sbjct: 537 EMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDG 596

Query: 318 DLEEAL-----------------------------RLREVMAA------KGVYPGVVTYN 342
           +  +A                              +L+E M        KG+ P V TY 
Sbjct: 597 NTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYT 656

Query: 343 SILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEA 402
           S++  LCKEG ++ A  L ++M +K I P+ VT N LIN  CK+G+ A A ++ + + E 
Sbjct: 657 SLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEK 716

Query: 403 GLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEAL 462
           GL  +  TY  +I G+CK+  +  A +L  GM   G  P    Y  L+DG C   N E  
Sbjct: 717 GLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKA 776

Query: 463 LKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYA 522
           L L    V  G+      + ALI  F K  K+  A +L   M  N I  + V YT L   
Sbjct: 777 LSLFLGMVEEGI-ASTPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEY 835

Query: 523 YWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASY---AKDNEILDLFWSHVVDRGL 577
           +   G  K    +  +M +R +M  +  Y S    Y    + +E+  LF   +V RG+
Sbjct: 836 HCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLF-DEMVARGI 892



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 153/582 (26%), Positives = 272/582 (46%), Gaps = 17/582 (2%)

Query: 8   NSDTKFIKTISAIMLKGHWAKLLNPN-IASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKW 66
           N     +K I++++ + +W  L+  + + + L    +  V+    N    P     FF W
Sbjct: 39  NQSDNTVKEITSLLKQKNWQFLIESSPLPNKLNPDVVFLVIKQ--NQVIDPKRLHGFFNW 96

Query: 67  AESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEK-IALRDFLSTPSVLNALVKIHDD 125
             S    +  +L +   +  IL  +  F +A N+LE+ I  R+      +L++++K + +
Sbjct: 97  VNSRTV-FSQNLSTFSILSLILCNSGLFGNAANVLERMIDTRN--PHVKILDSIIKCYKE 153

Query: 126 PDGNSHV-----LSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRL 180
            +G+S          L+  Y       + + VF   + +  +  L  C  L   L K   
Sbjct: 154 INGSSSSSSVVVFEILIDIYRKKGFLNEAVSVFLGAKTNEFIVGLACCNSLSKDLLKGNR 213

Query: 181 TDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNT 240
            ++ WKVYK M+   +V +++ Y  LI+A C+   V++ + +L +ME K    +L TY+ 
Sbjct: 214 VELFWKVYKGMLG-AIVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSV 272

Query: 241 LIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KG 298
           +IA  C+ G   EAL ++  M  +G+ PD   Y +LI GFCR+ R  E + +  ++   G
Sbjct: 273 VIAGLCRAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMG 332

Query: 299 ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDAN 358
             P+HV YT LI+G+ + +D+  A +++E M A+ +     TY +++  LCK G +  A 
Sbjct: 333 LKPDHVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAE 392

Query: 359 RLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGF 418
            L +EM    I PD  T N LI  Y K+ +   A ++   + +  L  + +   A+++G 
Sbjct: 393 DLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGL 452

Query: 419 CKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDV 478
           C   ++  A EL   M+  G  P+   Y+ +V G   +   E  +K+L     +GL  DV
Sbjct: 453 CHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDV 512

Query: 479 SVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDD 538
             Y  +I  FCK  K++  +     M   G+  +   Y +  + Y RAGE +A      +
Sbjct: 513 FCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIE 572

Query: 539 MYRRRLMITLKIYRSFSASYAKDNEILDLF--WSHVVDRGLM 578
           M    +     I       Y KD      F  +  ++D+G++
Sbjct: 573 MLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVL 614



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 124/438 (28%), Positives = 208/438 (47%), Gaps = 39/438 (8%)

Query: 126 PDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVW 185
           PD  +++ + L+  +   K + +G  + D+M    L P   A T L+N   K       +
Sbjct: 300 PD--NYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVKQSDIGGAF 357

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
           +V ++M    +  N   Y  LIH  CK  D++K E L  EM    ++ D+ TYN LI  Y
Sbjct: 358 QVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGY 417

Query: 246 CKKGMHYEALAVQDRMERE-----------------------------------GISPDI 270
            K     +A  +   +++E                                   G+ P+I
Sbjct: 418 YKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNI 477

Query: 271 VTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREV 328
           V Y +++ G  +EGR  EA ++   +K  G +P+   Y T+I G+C+A  +EE       
Sbjct: 478 VIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVE 537

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M AKG+ P V TY + +   C+ G ++ A R   EM +  IAP++V C  LI+ YCK G+
Sbjct: 538 MIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGN 597

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
           T  A      ML+ G++ D  T+  LIHG  K  ++  A  +   +LD G  P   +Y+ 
Sbjct: 598 TTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTS 657

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG 508
           L+   C + + +A  +L D+   +G+  ++  Y ALI   CK  ++  A+ LF+ +   G
Sbjct: 658 LISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKG 717

Query: 509 ILGDSVIYTSLAYAYWRA 526
           +  +SV Y+++   Y ++
Sbjct: 718 LARNSVTYSTIIAGYCKS 735



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 140/547 (25%), Positives = 247/547 (45%), Gaps = 58/547 (10%)

Query: 54  CHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTP 113
           CH   L+ A   + E      K ++  + T++  L K   F+ A  +L    ++D   +P
Sbjct: 453 CHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILG--VMKDQGLSP 510

Query: 114 ------SVLNALVKIHDDPDGNSHVLSWL--------------VIFYANLKMTQDGLQVF 153
                 +V+    K     +G S+++  +              +  Y      Q   + F
Sbjct: 511 DVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSF 570

Query: 154 DQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKS 213
            +M    + P+   CT L++   KD  T   +  ++ M+  GV+ ++  ++VLIH   K+
Sbjct: 571 IEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKN 630

Query: 214 SDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTY 273
             + +   +  E+  K +  D+FTY +LI+  CK+G    A  + D M ++GI+P+IVTY
Sbjct: 631 GKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTY 690

Query: 274 NSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAA 331
           N+LI+G C+ G + +AR LF  I  KG   N VTY+T+I GYC++ +L EA +L   M  
Sbjct: 691 NALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKL 750

Query: 332 KGVYPGVVTYNSILRKLCKEG----------------------------------RIRDA 357
            GV P    Y +++   CK G                                  ++ +A
Sbjct: 751 VGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIASTPAFNALIDGFFKLGKLIEA 810

Query: 358 NRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHG 417
            +L+ +M +  I P++VT   LI  +C +G+   A ++   M +  +M +  TY +L+HG
Sbjct: 811 YQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHG 870

Query: 418 FCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVD 477
           + +         L   M+  G  P   ++S +VD +  + N    LKL+D+ +S G+ V 
Sbjct: 871 YNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVC 930

Query: 478 VSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILD 537
            ++Y  LI   CK   +    ++ + ++  G         +L   + RAG       +L+
Sbjct: 931 KNLYTILIDALCKHNNLSEVLKVLDEVEKQGSKLSLATCGTLVCCFHRAGRTDEALRVLE 990

Query: 538 DMYRRRL 544
            M R  L
Sbjct: 991 SMVRSFL 997



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 90/390 (23%), Positives = 173/390 (44%), Gaps = 56/390 (14%)

Query: 78   LQSHWTMIHILTKNKHFKSA----QNMLEKIALRDFLSTPSVLNALVK---------IHD 124
            +Q+H  +IH L+KN   + A      +L+K  + D  +  S+++ L K         +HD
Sbjct: 617  VQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHD 676

Query: 125  D-------P-------------------------DG--------NSHVLSWLVIFYANLK 144
            D       P                         DG        NS   S ++  Y    
Sbjct: 677  DMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSA 736

Query: 145  MTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYN 204
               +  Q+F  M++  + P       L++   K   T+    ++  MV+ G+ A+   +N
Sbjct: 737  NLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGI-ASTPAFN 795

Query: 205  VLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMERE 264
             LI    K   + +  +L+ +M    +  +  TY  LI  +C  G   EA  +   M++ 
Sbjct: 796  ALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKR 855

Query: 265  GISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEA 322
             + P+++TY SL+HG+ R GR  E   LF ++  +G  P+ + ++ ++D + +  +  +A
Sbjct: 856  NVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKA 915

Query: 323  LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            L+L + M ++GV      Y  ++  LCK   + +  ++L+E+ ++       TC TL+  
Sbjct: 916  LKLVDDMLSEGVNVCKNLYTILIDALCKHNNLSEVLKVLDEVEKQGSKLSLATCGTLVCC 975

Query: 383  YCKIGDTASAMKVKNRMLEAGLMLDQFTYK 412
            + + G T  A++V   M+ + L L +F+ +
Sbjct: 976  FHRAGRTDEALRVLESMVRSFLNLLEFSVR 1005


>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 817

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 124/390 (31%), Positives = 199/390 (51%), Gaps = 4/390 (1%)

Query: 191 MVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGM 250
           M + GV  N+ +YNVLI   C+   +   EK+  EM   ++   + TYNTLI  YCK G 
Sbjct: 202 MRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGE 261

Query: 251 HYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTT 308
              A  +++RM+ + ++P+I+T+NSL+ G C+  +M+EAR L ++  + G  P+  TY+ 
Sbjct: 262 LDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSI 321

Query: 309 LIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKK 368
           L DG  R +D   A+ L E    KG+     T + +L  LCK+G++  A  +L +  E  
Sbjct: 322 LFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENG 381

Query: 369 IAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAK 428
           +  D V  NT +N YC+IGD   A+    RM   GL  +  T+ +LI  FC  KEMD A+
Sbjct: 382 LVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAE 441

Query: 429 ELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRF 488
           E +  M + G +PS  +Y+ L+DGY      +   ++L++    G+  +V  Y +LI   
Sbjct: 442 EWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCL 501

Query: 489 CKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITL 548
           CK  K+  A+ +   M   G+L ++ +Y  L       G+ K      D+M R  +  TL
Sbjct: 502 CKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTL 561

Query: 549 KIYRSFSASYAKDNEILDL--FWSHVVDRG 576
             Y        K  ++ +   F + +   G
Sbjct: 562 VTYNVLIDGLCKKGKLTEAEDFLTQITSSG 591



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 122/436 (27%), Positives = 215/436 (49%), Gaps = 24/436 (5%)

Query: 94  FKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVF 153
           FK  + M EK    + ++  S+L+ L K                     ++  ++   + 
Sbjct: 266 FKMRERMKEKSVAPNIITFNSLLSGLCK---------------------MRKMKEARSLL 304

Query: 154 DQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKS 213
            +M V+  MP  +  ++L + L +    +   ++Y++  + G+  N +  ++L++  CK 
Sbjct: 305 KEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQ 364

Query: 214 SDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTY 273
             V+K E++L +     + AD   YNT +  YC+ G   +A+   +RME  G+ P+ +T+
Sbjct: 365 GKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITF 424

Query: 274 NSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAA 331
           NSLI  FC    M +A    + +  KG TP+  TY TLIDGY +    +   ++ E M  
Sbjct: 425 NSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEE 484

Query: 332 KGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTAS 391
            GV P VV+Y S++  LCK+G+I +A  +L +M  + + P+    N LI+  C +G    
Sbjct: 485 IGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKD 544

Query: 392 AMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVD 451
           A++  + M+ + +     TY  LI G CK  ++  A++ L  +  +G SP   +Y+ L+ 
Sbjct: 545 ALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLIS 604

Query: 452 GYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILG 511
           GY N  N    L L +   + G+   V  Y  LI   C KE ++  ++L+N M    +L 
Sbjct: 605 GYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISG-CSKEGIELVEKLYNEMLQMNLLP 663

Query: 512 DSVIYTSLAYAYWRAG 527
           D V+Y ++ + Y   G
Sbjct: 664 DRVVYNAMIHCYAEIG 679



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 121/479 (25%), Positives = 219/479 (45%), Gaps = 41/479 (8%)

Query: 142 NLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIH 201
           NLKM   G++  D MR   + P++    VL+  L +++      K++ +M  + +V +I 
Sbjct: 191 NLKM---GMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDEMCNINLVGSIV 247

Query: 202 LYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRM 261
            YN LI   CK  ++D   K+   M+ K V  ++ T+N+L++  CK     EA ++   M
Sbjct: 248 TYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEM 307

Query: 262 EREGISPDIVTYNSL-----------------------------------IHGFCREGRM 286
           E  G  PD  TY+ L                                   ++G C++G++
Sbjct: 308 EVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKV 367

Query: 287 REARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSI 344
            +A  + +     G   + V Y T ++GYCR  D+ +A+   E M + G+ P  +T+NS+
Sbjct: 368 EKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSL 427

Query: 345 LRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGL 404
           + K C    +  A   + +M EK + P   T NTLI+ Y K+       ++  +M E G+
Sbjct: 428 IDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGV 487

Query: 405 MLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLK 464
             +  +Y +LI+  CK  ++  A+ +L  M+  G  P+   Y+ L+DG C     +  L+
Sbjct: 488 KPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALR 547

Query: 465 LLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYW 524
             DE +   +   +  Y  LI   CKK K+  A+     +  +G   D + Y SL   Y 
Sbjct: 548 FFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYA 607

Query: 525 RAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDN-EILDLFWSHVVDRGLMSKHI 582
            AG    C  + + M    +  T++ Y    +  +K+  E+++  ++ ++   L+   +
Sbjct: 608 NAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCSKEGIELVEKLYNEMLQMNLLPDRV 666



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 108/375 (28%), Positives = 181/375 (48%), Gaps = 5/375 (1%)

Query: 218 KVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLI 277
           KV  L  E+E    R D F Y   I    K       +   D M + G+ P++  YN LI
Sbjct: 159 KVVDLFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLI 218

Query: 278 HGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVY 335
            G CRE R+R+A ++F ++       + VTY TLIDGYC+  +L+ A ++RE M  K V 
Sbjct: 219 GGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVA 278

Query: 336 PGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKV 395
           P ++T+NS+L  LCK  ++++A  LL EM      PD  T + L +   +  D   AM++
Sbjct: 279 PNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMEL 338

Query: 396 KNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCN 455
             +  E G+ ++ +T   L++G CK  +++ A+E+L    + G       Y+  V+GYC 
Sbjct: 339 YEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCR 398

Query: 456 KNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVI 515
             +    +  ++   S GL  +   + +LI +FC  +++D A+     M   G+      
Sbjct: 399 IGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVET 458

Query: 516 YTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDR 575
           Y +L   Y +      C  IL+ M    +   +  Y S      KD +IL+   + +V R
Sbjct: 459 YNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILE---AEIVLR 515

Query: 576 GLMSKHIFKEMQLRN 590
            ++ + +    Q+ N
Sbjct: 516 DMICRGVLPNAQVYN 530



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 110/384 (28%), Positives = 184/384 (47%), Gaps = 3/384 (0%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           NS   + L+  + ++K      +   +M    + P +     L++   K    D  +++ 
Sbjct: 420 NSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQIL 479

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
           ++M ++GV  N+  Y  LI+  CK   + + E +L +M  + V  +   YN LI   C  
Sbjct: 480 EQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMV 539

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTY 306
           G   +AL   D M R  ISP +VTYN LI G C++G++ EA      I   G +P+ +TY
Sbjct: 540 GKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITY 599

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
            +LI GY  A ++ + L L E M   G+ P V TY+ ++    KEG I    +L NEM +
Sbjct: 600 NSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCSKEG-IELVEKLYNEMLQ 658

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
             + PD V  N +I+ Y +IG+T  A  +   ML+ G+  D+ TY +LI G  +  ++  
Sbjct: 659 MNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSN 718

Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
            K+L+  M     +P   +Y  LV G+C+  +         E V      + S+   L  
Sbjct: 719 IKDLVNNMKAKELAPKADTYDILVKGHCDLKDFSGAYVWYREMVENNFLPNASICNELTA 778

Query: 487 RFCKKEKVDYAQRLFNLMQGNGIL 510
              ++ ++   Q + + M   GI+
Sbjct: 779 GLEQEGRLQEVQVICSEMNVKGII 802



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 133/588 (22%), Positives = 249/588 (42%), Gaps = 99/588 (16%)

Query: 26  WAKLLNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMI 85
           + ++ N N+  S+ +   +  L++ Y  C +  L  AF         +   ++ +  +++
Sbjct: 234 FDEMCNINLVGSIVT---YNTLIDGY--CKVGELDAAFKMRERMKEKSVAPNIITFNSLL 288

Query: 86  HILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKM 145
             L K +  K A+++L+++ +  F+               PDG ++      I +  L  
Sbjct: 289 SGLCKMRKMKEARSLLKEMEVNGFM---------------PDGYTYS-----ILFDGLLR 328

Query: 146 TQDG---LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHL 202
             DG   +++++Q     +  + +  ++LLN L K    +   ++ KK  + G+VA+  +
Sbjct: 329 CDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVI 388

Query: 203 YNVLIHACCKSSDV-----------------------------------DKVEKLLCEME 227
           YN  ++  C+  D+                                   DK E+ + +M 
Sbjct: 389 YNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMA 448

Query: 228 FKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMR 287
            K V   + TYNTLI  Y K         + ++ME  G+ P++V+Y SLI+  C++G++ 
Sbjct: 449 EKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKIL 508

Query: 288 EARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSIL 345
           EA  + RD+  +G  PN   Y  LIDG C    +++ALR  + M    + P +VTYN ++
Sbjct: 509 EAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLI 568

Query: 346 RKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAM------------ 393
             LCK+G++ +A   L ++     +PD +T N+LI+ Y   G+ +  +            
Sbjct: 569 DGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIK 628

Query: 394 ----------------------KVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
                                 K+ N ML+  L+ D+  Y A+IH + +      A  L 
Sbjct: 629 PTVRTYHPLISGCSKEGIELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLH 688

Query: 432 FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
            GMLD G  P   +Y+ L+ G+  +     +  L++   ++ L      Y  L++  C  
Sbjct: 689 QGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAKELAPKADTYDILVKGHCDL 748

Query: 492 EKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
           +    A   +  M  N  L ++ I   L     + G  +    I  +M
Sbjct: 749 KDFSGAYVWYREMVENNFLPNASICNELTAGLEQEGRLQEVQVICSEM 796


>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
           EFFECT EMBRYO ARREST 40; Flags: Precursor
 gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
 gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
 gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 754

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 125/403 (31%), Positives = 198/403 (49%), Gaps = 3/403 (0%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           + + M  + L+P     T ++    ++   D   ++ ++MV+ G   +    NV++H  C
Sbjct: 211 MLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFC 270

Query: 212 KSSDVDKVEKLLCEMEFKD-VRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           K   V+     + EM  +D    D +T+NTL+   CK G    A+ + D M +EG  PD+
Sbjct: 271 KEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDV 330

Query: 271 VTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
            TYNS+I G C+ G ++EA  +   +  +  +PN VTY TLI   C+ N +EEA  L  V
Sbjct: 331 YTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARV 390

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           + +KG+ P V T+NS+++ LC     R A  L  EM  K   PD  T N LI++ C  G 
Sbjct: 391 LTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGK 450

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
              A+ +  +M  +G      TY  LI GFCKA +   A+E+   M   G S +  +Y+ 
Sbjct: 451 LDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNT 510

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG 508
           L+DG C     E   +L+D+ +  G   D   Y +L+  FC+   +  A  +   M  NG
Sbjct: 511 LIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNG 570

Query: 509 ILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIY 551
              D V Y +L     +AG  +  S +L  +  + + +T   Y
Sbjct: 571 CEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAY 613



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 132/466 (28%), Positives = 230/466 (49%), Gaps = 13/466 (2%)

Query: 84  MIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPD------GNSHVLSWLV 137
           + ++ +K  +F     + E+I LR  L      + + KI +D        G S  L  L+
Sbjct: 69  LFNLASKKPNFSPEPALYEEILLR--LGRSGSFDDMKKILEDMKSSRCEMGTSTFL-ILI 125

Query: 138 IFYANLKMTQDGLQVFDQM-RVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGV 196
             YA  ++  + L V D M     L P  H    +LN L       +V   + KM   G+
Sbjct: 126 ESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGI 185

Query: 197 VANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALA 256
             ++  +NVLI A C++  +     +L +M    +  D  T+ T++  Y ++G    AL 
Sbjct: 186 KPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALR 245

Query: 257 VQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK---GATPNHVTYTTLIDGY 313
           ++++M   G S   V+ N ++HGFC+EGR+ +A    +++    G  P+  T+ TL++G 
Sbjct: 246 IREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGL 305

Query: 314 CRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDN 373
           C+A  ++ A+ + +VM  +G  P V TYNS++  LCK G +++A  +L++M  +  +P+ 
Sbjct: 306 CKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNT 365

Query: 374 VTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFG 433
           VT NTLI+  CK      A ++   +   G++ D  T+ +LI G C  +   +A EL   
Sbjct: 366 VTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEE 425

Query: 434 MLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEK 493
           M   G  P   +Y+ L+D  C+K   +  L +L +    G    V  Y  LI  FCK  K
Sbjct: 426 MRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANK 485

Query: 494 VDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
              A+ +F+ M+ +G+  +SV Y +L     ++   +  + ++D M
Sbjct: 486 TREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQM 531



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 113/387 (29%), Positives = 186/387 (48%), Gaps = 4/387 (1%)

Query: 147 QDGLQVFDQMRVHN-LMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNV 205
           +D L    +M   +   P  +    L+N L K        ++   M+Q G   +++ YN 
Sbjct: 276 EDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNS 335

Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
           +I   CK  +V +  ++L +M  +D   +  TYNTLI+  CK+    EA  +   +  +G
Sbjct: 336 VISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKG 395

Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEAL 323
           I PD+ T+NSLI G C     R A  LF ++  KG  P+  TY  LID  C    L+EAL
Sbjct: 396 ILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEAL 455

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
            + + M   G    V+TYN+++   CK  + R+A  + +EM    ++ ++VT NTLI+  
Sbjct: 456 NMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGL 515

Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY 443
           CK      A ++ ++M+  G   D++TY +L+  FC+  ++  A +++  M   G  P  
Sbjct: 516 CKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDI 575

Query: 444 CSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF-N 502
            +Y  L+ G C     E   KLL     +G+ +    Y  +I+   +K K   A  LF  
Sbjct: 576 VTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFRE 635

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEP 529
           +++ N    D+V Y  +       G P
Sbjct: 636 MLEQNEAPPDAVSYRIVFRGLCNGGGP 662



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 110/371 (29%), Positives = 182/371 (49%), Gaps = 10/371 (2%)

Query: 115 VLNALVKIHDDPDGNSH--VLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLL 172
           +++ +++   DPD  ++  V+S L      L   ++ ++V DQM   +  P+      L+
Sbjct: 317 IMDVMLQEGYDPDVYTYNSVISGL----CKLGEVKEAVEVLDQMITRDCSPNTVTYNTLI 372

Query: 173 NSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVR 232
           ++L K+   +   ++ + +   G++ ++  +N LI   C + +     +L  EM  K   
Sbjct: 373 STLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCE 432

Query: 233 ADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRL 292
            D FTYN LI   C KG   EAL +  +ME  G +  ++TYN+LI GFC+  + REA  +
Sbjct: 433 PDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEI 492

Query: 293 FRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
           F +++  G + N VTY TLIDG C++  +E+A +L + M  +G  P   TYNS+L   C+
Sbjct: 493 FDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCR 552

Query: 351 EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
            G I+ A  ++  M      PD VT  TLI+  CK G    A K+   +   G+ L    
Sbjct: 553 GGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHA 612

Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSPS-YCSYSWLVDGYCNKNNE-EALLKLLDE 468
           Y  +I G  + ++   A  L   ML+   +P    SY  +  G CN        +  L E
Sbjct: 613 YNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVE 672

Query: 469 FVSRGLCVDVS 479
            + +G   + S
Sbjct: 673 LLEKGFVPEFS 683



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 103/320 (32%), Positives = 152/320 (47%), Gaps = 9/320 (2%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           GI PD+ T+N LI   CR  ++R A  +  D+   G  P+  T+TT++ GY    DL+ A
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGA 243

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM-NEKKIAPDNVTCNTLIN 381
           LR+RE M   G     V+ N I+   CKEGR+ DA   + EM N+    PD  T NTL+N
Sbjct: 244 LRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVN 303

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
             CK G    A+++ + ML+ G   D +TY ++I G CK  E+  A E+L  M+    SP
Sbjct: 304 GLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSP 363

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
           +  +Y+ L+   C +N  E   +L     S+G+  DV  + +LI+  C       A  LF
Sbjct: 364 NTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELF 423

Query: 502 NLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKD 561
             M+  G   D   Y  L  +    G+     ++L  M       ++  Y +    + K 
Sbjct: 424 EEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKA 483

Query: 562 N------EILDLFWSHVVDR 575
           N      EI D    H V R
Sbjct: 484 NKTREAEEIFDEMEVHGVSR 503


>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
 gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
          Length = 471

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 128/412 (31%), Positives = 211/412 (51%), Gaps = 6/412 (1%)

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
           P+ +   V+L S  K       +K++++M+  G+  +   YN+LI    K   VD+  +L
Sbjct: 6   PNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRL 65

Query: 223 LCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR 282
             EM    +   ++TYN+L+  +CK+    EA+ +   M  +G  PD+VTY+++I G C+
Sbjct: 66  YEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCK 125

Query: 283 EGRMREA-RRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVV 339
            G++ EA   LF  +  +G + N V Y  LI+G C+  ++E A +L E MA+KG  P  +
Sbjct: 126 TGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNI 185

Query: 340 TYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRM 399
           TYN+IL  LC+ G++ +A +  + M  +  +PD V  N L++A  K G T  AMK+   +
Sbjct: 186 TYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDV 245

Query: 400 LEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNE 459
           +  G M D  TY +++ G  +   MD A+E+   M+ +G +P+  +YS ++ G+C     
Sbjct: 246 IAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKV 305

Query: 460 EALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
           +   K+L+E    G   DV  Y  L+   CK   VD A  LF+ M  NG   D V Y+ +
Sbjct: 306 DDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVV 365

Query: 520 AYAYWRAGEPKACSDILDDMYRRRL---MITLKIYRSFSASYAKDNEILDLF 568
                +  +      + D M  R+L   ++T  I         K +E  DL 
Sbjct: 366 LNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLL 417



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 121/396 (30%), Positives = 209/396 (52%), Gaps = 3/396 (0%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           +DG ++F+QM  + + P      +L++  AK    D   ++Y++MV +G+  +I+ YN L
Sbjct: 25  RDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLYEEMVSVGLEPSIYTYNSL 84

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQ-DRMEREG 265
           ++A CK + + +  +L   M  K    D+ TY+T+I+  CK G   EAL +   +M   G
Sbjct: 85  LNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIERG 144

Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEAL 323
            S + V YN+LI+G C++  +  A +L  ++  KG  P+++TY T++ G CR   + EA 
Sbjct: 145 CSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAK 204

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
           +  + M ++G  P VV YN +L  L KEG+  +A +L  ++  K   PD VT N+++   
Sbjct: 205 QFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGL 264

Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY 443
            +  +   A ++  +M+ +G   +  TY  ++ G C+AK++D A ++L  M   G  P  
Sbjct: 265 ARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDV 324

Query: 444 CSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNL 503
            +Y+ L+DG C  N  +   +L    V  G   D+  Y  ++   CK  KV  A+ LF+ 
Sbjct: 325 VTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDR 384

Query: 504 MQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
           M    ++ D V +  L     +AG+     D+LD M
Sbjct: 385 MIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQM 420



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 116/382 (30%), Positives = 196/382 (51%), Gaps = 4/382 (1%)

Query: 134 SWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAK-DRLTDMVWKVYKKMV 192
           S L  F    KM ++ +++F  M      P +   + +++ L K  ++T+ +  ++ KM+
Sbjct: 83  SLLNAFCKETKM-KEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMI 141

Query: 193 QLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHY 252
           + G  AN   YN LI+  CK  ++++  KLL EM  K    D  TYNT+++  C+ G   
Sbjct: 142 ERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVS 201

Query: 253 EALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLI 310
           EA    D M   G SPD+V YN L+    +EG+  EA +LF+D+  KG  P+ VTY +++
Sbjct: 202 EAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSIL 261

Query: 311 DGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIA 370
            G  R ++++EA  + + M A G  P   TY+ +L   C+  ++ DA+++L EM++    
Sbjct: 262 LGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAV 321

Query: 371 PDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL 430
           PD VT N L++  CK      A ++ + M++ G   D  +Y  +++G CK  ++  A+ L
Sbjct: 322 PDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVL 381

Query: 431 LFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCK 490
              M++    P   +++ L+DG C     +    LLD+    G   D   Y  L+    K
Sbjct: 382 FDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRK 441

Query: 491 KEKVDYAQRLFNLMQGNGILGD 512
           + +   A RL   M+  G L D
Sbjct: 442 QGRHIQADRLTQAMKEKGFLSD 463



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 90/279 (32%), Positives = 149/279 (53%), Gaps = 7/279 (2%)

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
           SP+  T+  ++  FC++G++R+  +LF  +   G +P+ + Y  LIDGY +   ++EA R
Sbjct: 5   SPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANR 64

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           L E M + G+ P + TYNS+L   CKE ++++A  L   M EK   PD VT +T+I+  C
Sbjct: 65  LYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLC 124

Query: 385 KIGDTASAMKVK-NRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY 443
           K G    A+++  ++M+E G   +   Y ALI+G CK + ++ A +LL  M   G+ P  
Sbjct: 125 KTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDN 184

Query: 444 CSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNL 503
            +Y+ ++ G C         +  D   SRG   DV  Y  L+    K+ K D A +LF  
Sbjct: 185 ITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKD 244

Query: 504 MQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRR 542
           +   G + D+V Y S+     R    K+  D  ++M+++
Sbjct: 245 VIAKGYMPDTVTYNSILLGLAR----KSNMDEAEEMFKK 279



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 91/334 (27%), Positives = 169/334 (50%), Gaps = 23/334 (6%)

Query: 80  SHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSH--VLSWLV 137
           ++  +I+ L K+++ + A  +LE++A + ++               PD  ++  +LS L 
Sbjct: 151 AYNALINGLCKDENIERAYKLLEEMASKGYV---------------PDNITYNTILSGL- 194

Query: 138 IFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVV 197
                +    +  Q FD M      P + A   LL++L K+  TD   K++K ++  G +
Sbjct: 195 ---CRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYM 251

Query: 198 ANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAV 257
            +   YN ++    + S++D+ E++  +M       +  TY+ +++ +C+     +A  V
Sbjct: 252 PDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKV 311

Query: 258 QDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCR 315
            + M + G  PD+VTYN L+ G C+   + +A  LF  +   G  P+ V+Y+ +++G C+
Sbjct: 312 LEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCK 371

Query: 316 ANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVT 375
            N + +A  L + M  + + P VVT+N ++  LCK G++ +A  LL++M     APD V 
Sbjct: 372 TNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVA 431

Query: 376 CNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQF 409
            NTL+N   K G    A ++   M E G + D F
Sbjct: 432 YNTLMNGLRKQGRHIQADRLTQAMKEKGFLSDCF 465



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 79/256 (30%), Positives = 125/256 (48%), Gaps = 1/256 (0%)

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
           +PN  T+  ++  +C+   L +  +L E M   G+ P  + YN ++    K+GR+ +ANR
Sbjct: 5   SPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANR 64

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
           L  EM    + P   T N+L+NA+CK      AM++   M E G   D  TY  +I G C
Sbjct: 65  LYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLC 124

Query: 420 KAKEMDIAKELLF-GMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDV 478
           K  ++  A E+LF  M++ G S +  +Y+ L++G C   N E   KLL+E  S+G   D 
Sbjct: 125 KTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDN 184

Query: 479 SVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDD 538
             Y  ++   C+  KV  A++ F+ M   G   D V Y  L  A ++ G+      +  D
Sbjct: 185 ITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKD 244

Query: 539 MYRRRLMITLKIYRSF 554
           +  +  M     Y S 
Sbjct: 245 VIAKGYMPDTVTYNSI 260



 Score = 46.6 bits (109), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 34/138 (24%), Positives = 58/138 (42%), Gaps = 13/138 (9%)

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
           S+C    L DGY          KL ++ +  G+  D   Y  LI  + KK +VD A RL+
Sbjct: 17  SFCKQGKLRDGY----------KLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLY 66

Query: 502 NLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKD 561
             M   G+      Y SL  A+ +  + K   ++   M  +     +  Y +  +   K 
Sbjct: 67  EEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKT 126

Query: 562 N---EILDLFWSHVVDRG 576
               E L++ +  +++RG
Sbjct: 127 GKVTEALEMLFHKMIERG 144


>gi|357443403|ref|XP_003591979.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355481027|gb|AES62230.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 873

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 167/565 (29%), Positives = 257/565 (45%), Gaps = 49/565 (8%)

Query: 10  DTKFIKTISAIMLKGHWAKLLNPNIASSLTSTAIHKVLLNLYNCCHI-PSLSCAFFKWAE 68
           + + I+TI+ I+ K    + L   I   LT   I  +L   Y   H  P    +FFKW +
Sbjct: 22  ERQLIRTITTILTKNENPQNLQQFIPH-LTLPIIISILS--YKPLHSQPETLLSFFKWFQ 78

Query: 69  S-AVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPD 127
           S A  +  HS +   T++  L   + F  A+++L      D        + L   H  P 
Sbjct: 79  SNAHSSLIHSPKPLLTLLPPLLSRRKFSDAKSLLLNFISSDHPHHSLHAHLLRSDHTIPK 138

Query: 128 GNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLT-DMVW- 185
               +L   +  Y   K    G Q+F++M+     P+L  C  LLN+L +   +  +V+ 
Sbjct: 139 P---LLDTSLAAYVISKQPHLGHQIFNKMKRLRFRPNLLTCNTLLNALVRSNSSHSLVFS 195

Query: 186 -KVYKKMVQLGVVANIHLYNVLIH-----------------------------------A 209
            +V++  V+LGV  N++ +N+LIH                                   A
Sbjct: 196 REVFQDAVKLGVQPNVNTFNILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTA 255

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
            CK S + +V  LL +M+   +  +  TYN L+  YCK     EA  V + M  +G+ PD
Sbjct: 256 LCKRSQLTQVRDLLLQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPD 315

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDIKG--ATPNHVTYTTLIDGYCRANDLEEALRLRE 327
           + TYN+++ G C EG++ EA RL   ++     P+ VTY TLIDG       + A +L E
Sbjct: 316 VWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVE 375

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
            M A+GV    VT+N +++  C EG+I +A+ ++ +M E   +PD  T NT+IN YCK G
Sbjct: 376 EMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAG 435

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
             A A K+ + M   GL LD FT   L+H  C  K++D A  L       G+     +Y 
Sbjct: 436 KMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYG 495

Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGN 507
            L+ GY      +  LKL +E    G+   +  Y  +IR  C   K D A    N +   
Sbjct: 496 TLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEK 555

Query: 508 GILGDSVIYTSLAYAY-WRAGEPKA 531
           G++ D      + + Y W     KA
Sbjct: 556 GLVPDESTSNIIIHGYCWEGAVEKA 580



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 113/382 (29%), Positives = 181/382 (47%), Gaps = 37/382 (9%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           + +++ D+M    L+P +     L++   + R +D  +K+ ++M   GV  N   +N++I
Sbjct: 334 EAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMI 393

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
              C    +D+   ++ +M       D FTYNT+I  YCK G   EA  + D M R+G+ 
Sbjct: 394 KWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLK 453

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRL 325
            D  T N+L+H  C E ++ +A  L    +  G   + VTY TLI GY +    + AL+L
Sbjct: 454 LDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKL 513

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
            E M   G+   ++TYN+I+R LC  G+   A   LNE+ EK + PD  T N +I+ YC 
Sbjct: 514 WEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCW 573

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            G    A +  N+M+E  L  D FT   L+ G C+            GML+ G       
Sbjct: 574 EGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCRE-----------GMLEKG------- 615

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
                            L L + ++S+G  +D   Y  +I  FCK+ +++ A  L   M+
Sbjct: 616 -----------------LTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEME 658

Query: 506 GNGILGDSVIYTSLAYAYWRAG 527
           G  +  D   Y ++     +AG
Sbjct: 659 GKNLEPDRYTYNAIVTGLTKAG 680



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 132/274 (48%), Gaps = 13/274 (4%)

Query: 177 KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLF 236
           KD   D   K++++M + G+VA I  YN +I   C S   D+    L E+  K +  D  
Sbjct: 503 KDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDES 562

Query: 237 TYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD- 295
           T N +I  YC +G   +A    ++M    + PDI T N L+ G CREG + +   LF   
Sbjct: 563 TSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTW 622

Query: 296 -IKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRI 354
             KG   + VTY  +I  +C+   LE+A  L   M  K + P   TYN+I+  L K GR 
Sbjct: 623 ISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRT 682

Query: 355 RDANRLLNEMNEK-------KIAPDNVTCNTL----INAYCKIGDTASAMKVKNRMLEAG 403
            +A +L  +  EK         +P+  T + +    I++ C  G    AMK+  +  + G
Sbjct: 683 EEAEKLALKFAEKGQQVKTQDTSPELGTSDMMYSEQISSLCTQGKYKDAMKLFQQAEQKG 742

Query: 404 LMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA 437
           + L+++TY  L+ G  K ++      LL  M+ A
Sbjct: 743 VSLNKYTYIKLMDGLLKRRKSFTTTSLLPFMVSA 776



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 78/282 (27%), Positives = 128/282 (45%), Gaps = 38/282 (13%)

Query: 301 PNHVTYTTLIDGYCRANDLEEALRLREVM--AAK-GVYPGVVTYNSILRKLCKEGRIRDA 357
           PN +T  TL++   R+N     +  REV   A K GV P V T+N ++   C +    +A
Sbjct: 171 PNLLTCNTLLNALVRSNSSHSLVFSREVFQDAVKLGVQPNVNTFNILIHGYCSDNNTEEA 230

Query: 358 NRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHG 417
            RL+N+M E    PDNVT NT++ A CK         +  +M  +GL  ++ TY  L+HG
Sbjct: 231 LRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSGLFPNRNTYNILVHG 290

Query: 418 FCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKN-------------------- 457
           +CK K +  A E++  M   G  P   +Y+ +V G C++                     
Sbjct: 291 YCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPD 350

Query: 458 ---------------NEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
                            +A  KL++E  +RG+  +   +  +I+ FC + K+D A  +  
Sbjct: 351 VVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMV 410

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL 544
            M  +G   D   Y ++   Y +AG+      ++D+M R+ L
Sbjct: 411 KMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGL 452



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 50/240 (20%), Positives = 102/240 (42%), Gaps = 22/240 (9%)

Query: 146 TQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNV 205
           T   +   +++    L+P      ++++    +   +  ++ + KMV+  +  +I   N+
Sbjct: 542 TDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNI 601

Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
           L+   C+   ++K   L      K    D  TYN +I+ +CK+    +A  +   ME + 
Sbjct: 602 LLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKN 661

Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRL 325
           + PD  TYN+++ G  + GR  EA +L   +K A               +  D    L  
Sbjct: 662 LEPDRYTYNAIVTGLTKAGRTEEAEKL--ALKFAEKGQ---------QVKTQDTSPELGT 710

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
            ++M           Y+  +  LC +G+ +DA +L  +  +K ++ +  T   L++   K
Sbjct: 711 SDMM-----------YSEQISSLCTQGKYKDAMKLFQQAEQKGVSLNKYTYIKLMDGLLK 759


>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 694

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 127/434 (29%), Positives = 213/434 (49%), Gaps = 4/434 (0%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           SVL  ++K+   P  N+ +L+ L+         +  L   D++       +  +   LLN
Sbjct: 188 SVLGKILKLGYQP--NTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLN 245

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
            L K   T    K+ + +       ++ +YN +I   CK   V++      EM  + +  
Sbjct: 246 GLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFP 305

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           D+ TY+TLI  +C  G    A ++ + M  + I+PD+ TY  LI   C+EG+++EA+ L 
Sbjct: 306 DVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLL 365

Query: 294 RDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
             +  +G  PN VTY+TL+DGYC   ++  A ++   M    V P V +YN ++  LCK 
Sbjct: 366 GVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKG 425

Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
             + +A  LL EM  K + P+ VT N+LI+  CK G   SA+ +   +   G   D  TY
Sbjct: 426 KSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITY 485

Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
            +L+ G CK + +D A  L   M + G  P+  +Y+ L+DG C     +   KL    + 
Sbjct: 486 TSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILV 545

Query: 472 RGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKA 531
           +G C+DV  Y  +I   CK+  +D A  + + M+ NG + D+V +  +  + +   E   
Sbjct: 546 KGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRSLFEKDENDK 605

Query: 532 CSDILDDMYRRRLM 545
              +L +M  + L+
Sbjct: 606 AEKLLHEMIAKGLL 619



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 91/320 (28%), Positives = 155/320 (48%), Gaps = 2/320 (0%)

Query: 225 EMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREG 284
           +ME K +  DL T + LI  +C  G    + +V  ++ + G  P+ +   +L+ G C +G
Sbjct: 157 QMEVKGIEPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKG 216

Query: 285 RMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYN 342
            ++++      +  +G   N V+Y TL++G C+  +   A++L  ++  +   P VV YN
Sbjct: 217 EVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYN 276

Query: 343 SILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEA 402
           +I+  LCK+  + +A     EMN + I PD +T +TLI  +C  G    A  + N M   
Sbjct: 277 TIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLK 336

Query: 403 GLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEAL 462
            +  D +TY  LI   CK  ++  AK LL  M   G  P+  +YS L+DGYC        
Sbjct: 337 NINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNA 396

Query: 463 LKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYA 522
            ++    V   +   V  Y  +I   CK + VD A  L   M    ++ ++V Y SL   
Sbjct: 397 KQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDG 456

Query: 523 YWRAGEPKACSDILDDMYRR 542
             ++G   +  D++ +++ R
Sbjct: 457 LCKSGRITSALDLMKELHHR 476



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 63/265 (23%), Positives = 115/265 (43%)

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
           TP+ + +  ++    +      A+ L + M  KG+ P +VT + ++   C  G++  +  
Sbjct: 129 TPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQMAFSFS 188

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
           +L ++ +    P+ +   TL+   C  G+   ++   ++++  G  ++Q +Y  L++G C
Sbjct: 189 VLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLC 248

Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
           K  E   A +LL  + D    P    Y+ ++DG C             E  SRG+  DV 
Sbjct: 249 KIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVI 308

Query: 480 VYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
            Y  LI  FC   ++  A  L N M    I  D   YT L  A  + G+ K   ++L  M
Sbjct: 309 TYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVM 368

Query: 540 YRRRLMITLKIYRSFSASYAKDNEI 564
            +  +   +  Y +    Y    E+
Sbjct: 369 TKEGVKPNVVTYSTLMDGYCLVGEV 393



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/229 (26%), Positives = 100/229 (43%), Gaps = 35/229 (15%)

Query: 77  SLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWL 136
           S+ S+  MI+ L K K    A N+L ++  ++ +      N+L+   D    +  + S L
Sbjct: 411 SVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLI---DGLCKSGRITSAL 467

Query: 137 VIFYANLKMTQDGLQVFDQMRVHNLMPHLH---------ACTVLLNSLAKDRLTDMVWKV 187
                                  +LM  LH           T LL+ L K++  D    +
Sbjct: 468 -----------------------DLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIAL 504

Query: 188 YKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCK 247
           + KM + G+  N + Y  LI   CK + +   +KL   +  K    D++TYN +I   CK
Sbjct: 505 FMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCK 564

Query: 248 KGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI 296
           +GM  EALA++ +ME  G  PD VT+  +I     +    +A +L  ++
Sbjct: 565 EGMLDEALAMKSKMEDNGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEM 613



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 70/339 (20%), Positives = 126/339 (37%), Gaps = 63/339 (18%)

Query: 264 EGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEE 321
           +GI P++VT + LI+     G+M  +  +   I   G  PN +T TTL+ G  R      
Sbjct: 5   KGIVPNLVTLSILINCLRHLGQMAFSFSVLGKILKLGYQPNSITLTTLMKGETRC----- 59

Query: 322 ALRLREVMAAKGVYPGVVTYNSILRKLCKEGR---------------------IRDANRL 360
           A++L  ++  +   P +   +S+   +                          + DA   
Sbjct: 60  AIKLPRMIEDRSTRPLMWLSSSLSHSIPNFPPFLPNPTFPFYFHSQPPSIHDVVHDAVSQ 119

Query: 361 LNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCK 420
            N M   +  P  +    ++ +  K+    +A+ +  +M   G+  D  T   LI+ FC 
Sbjct: 120 FNGMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCH 179

Query: 421 AKEMDIAKELLFGMLDAGFSP-----------------------------------SYCS 445
             +M  +  +L  +L  G+ P                                   +  S
Sbjct: 180 LGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVS 239

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y  L++G C        +KLL     R    DV +Y  +I   CK + V+ A   +  M 
Sbjct: 240 YGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMN 299

Query: 506 GNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL 544
             GI  D + Y++L   +  AG+      +L++M  + +
Sbjct: 300 SRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNI 338


>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 529

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 133/436 (30%), Positives = 215/436 (49%), Gaps = 6/436 (1%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNL-MPHLHACTVLL 172
           SVL  ++K+   PD  +  L+ L+         +  L   D++      M H+   T LL
Sbjct: 66  SVLGKILKLGYQPD--TITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGT-LL 122

Query: 173 NSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVR 232
           N L K   T    K+ + +       N+ +YN +I   CK   V++   L  EM+ + + 
Sbjct: 123 NGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIF 182

Query: 233 ADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRL 292
            D  TY TLI  +C  G    A ++ D M  + I+P +  YN LI+  C+EG ++EA+ L
Sbjct: 183 PDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNL 242

Query: 293 FRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
              +  +G  P  VTY+TL+DGYC   +++ A ++   M   GV P V +YN ++  LCK
Sbjct: 243 LAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCK 302

Query: 351 EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
             R+ +A  LL EM  K + PD VT N+LI+  CK G   SA+ + N M   G   D  T
Sbjct: 303 CKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVT 362

Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFV 470
           Y +L+   CK + +D A  L   M + G  P+  +Y+ L+DG C     +   +L    +
Sbjct: 363 YTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLL 422

Query: 471 SRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPK 530
            +G C+DV  Y  +I   CK+   D A  + + M+ NG + ++V +  +  + +   E  
Sbjct: 423 VKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDEND 482

Query: 531 ACSDILDDMYRRRLMI 546
               +L +M  + L++
Sbjct: 483 KAEKLLHEMIAKGLLV 498



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 121/424 (28%), Positives = 203/424 (47%), Gaps = 2/424 (0%)

Query: 141 ANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANI 200
           A +K     + +  QM V  +  +     +L+N           + V  K+++LG   + 
Sbjct: 21  AKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSVLGKILKLGYQPDT 80

Query: 201 HLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDR 260
              N L+   C   +V K      ++  +  + D  +Y TL+   CK G    A+ +   
Sbjct: 81  ITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIGETRCAVKLLRM 140

Query: 261 MEREGISPDIVTYNSLIHGFCREGRMREARRLFR--DIKGATPNHVTYTTLIDGYCRAND 318
           +E     P++V YN++I G C++  + EA  L+   D +G  P+ +TYTTLI G+C    
Sbjct: 141 IEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQ 200

Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT 378
           L  A  L + M  K + PGV  YN ++  LCKEG +++A  LL  M ++ I P  VT +T
Sbjct: 201 LMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYST 260

Query: 379 LINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAG 438
           L++ YC +G+  +A ++ + M++ G+  + ++Y  +I+G CK K +D A  LL  ML   
Sbjct: 261 LMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKN 320

Query: 439 FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQ 498
             P   +Y+ L+DG C      + L L++E   RG   DV  Y +L+   CK + +D A 
Sbjct: 321 MVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKAT 380

Query: 499 RLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASY 558
            LF  M+  GI      YT+L     + G  K   ++   +  +   I +  Y    +  
Sbjct: 381 ALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGL 440

Query: 559 AKDN 562
            K+ 
Sbjct: 441 CKEG 444



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 97/342 (28%), Positives = 171/342 (50%), Gaps = 2/342 (0%)

Query: 225 EMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREG 284
           +ME K +RA+  T N LI  +C  G    + +V  ++ + G  PD +T N+L+ G C +G
Sbjct: 35  QMEVKGIRANFVTLNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKG 94

Query: 285 RMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYN 342
            ++++      +  +G   +HV+Y TL++G C+  +   A++L  ++  +   P VV YN
Sbjct: 95  EVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYN 154

Query: 343 SILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEA 402
           +I+  LCK+  + +A  L +EM+ + I PD +T  TLI  +C +G    A  + + M+  
Sbjct: 155 TIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILK 214

Query: 403 GLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEAL 462
            +    + Y  LI+  CK   +  AK LL  M   G  P   +YS L+DGYC     +  
Sbjct: 215 NINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNA 274

Query: 463 LKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYA 522
            ++    V  G+  +V  Y  +I   CK ++VD A  L   M    ++ D+V Y SL   
Sbjct: 275 KQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDG 334

Query: 523 YWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
             ++G   +  +++++M+ R     +  Y S   +  K+  +
Sbjct: 335 LCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNL 376



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 84/256 (32%), Positives = 130/256 (50%), Gaps = 6/256 (2%)

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
           +++  MVQ+GV  N++ YN++I+  CK   VD+   LL EM  K++  D  TYN+LI   
Sbjct: 276 QIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGL 335

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNH 303
           CK G    AL + + M   G   D+VTY SL+   C+   + +A  LF  +K  G  P  
Sbjct: 336 CKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTM 395

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
            TYT LIDG C+   L+ A  L + +  KG    V TY  ++  LCKEG   +A  + ++
Sbjct: 396 YTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSK 455

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
           M +    P+ VT   +I +  +  +   A K+ + M+  GL++  F    +        E
Sbjct: 456 MEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLLVLDFKVADVF----VQNE 511

Query: 424 MDIAKELLFGMLDAGF 439
            D A++LL  M+  G 
Sbjct: 512 NDKAEKLLHEMIAKGL 527



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 104/229 (45%)

Query: 336 PGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKV 395
           P ++ +N IL  L K  +   A  L  +M  K I  + VT N LIN +C +G  A +  V
Sbjct: 8   PPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSV 67

Query: 396 KNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCN 455
             ++L+ G   D  T   L+ G C   E+  +      ++  GF   + SY  L++G C 
Sbjct: 68  LGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCK 127

Query: 456 KNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVI 515
                  +KLL     R    +V +Y  +I   CK + V+ A  L++ M   GI  D++ 
Sbjct: 128 IGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAIT 187

Query: 516 YTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
           YT+L Y +   G+      +LD+M  + +   + IY     +  K+  +
Sbjct: 188 YTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNV 236



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 64/277 (23%), Positives = 112/277 (40%), Gaps = 35/277 (12%)

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
           TP  + +  ++    +      A+ L + M  KG+    VT N ++   C  G++  +  
Sbjct: 7   TPPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFS 66

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
           +L ++ +    PD +T NTL+   C  G+   ++   ++++  G  +D  +Y  L++G C
Sbjct: 67  VLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLC 126

Query: 420 KAKEMDIAKEL----------------------------------LFGMLDA-GFSPSYC 444
           K  E   A +L                                  L+  +DA G  P   
Sbjct: 127 KIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAI 186

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
           +Y+ L+ G+C          LLDE + + +   V +Y  LI   CK+  V  A+ L  +M
Sbjct: 187 TYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVM 246

Query: 505 QGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
              GI    V Y++L   Y   GE +    I   M +
Sbjct: 247 TKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQ 283



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/217 (23%), Positives = 98/217 (45%), Gaps = 17/217 (7%)

Query: 80  SHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIF 139
           S+  MI+ L K K    A N+L ++  ++ +      N+L+   D    +  + S     
Sbjct: 292 SYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLI---DGLCKSGRITS----- 343

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
                     L + ++M        +   T LL++L K++  D    ++ KM + G+   
Sbjct: 344 ---------ALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPT 394

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
           ++ Y  LI   CK   +   ++L   +  K    D++TY  +I+  CK+GM  EALA++ 
Sbjct: 395 MYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKS 454

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI 296
           +ME  G  P+ VT+  +I     +    +A +L  ++
Sbjct: 455 KMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEM 491


>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
 gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
          Length = 543

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 109/305 (35%), Positives = 174/305 (57%)

Query: 236 FTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD 295
            TYNTLI  +CK G    A  +   M+  G SPD+VT++S++   C  G +  A + FR+
Sbjct: 106 ITYNTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRE 165

Query: 296 IKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIR 355
                P+ V +  L+ G C+AN L EA ++ E M+ +G+ P VVTYNS++  LCK  R+ 
Sbjct: 166 SVECAPDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRME 225

Query: 356 DANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALI 415
           +A +LL  M ++K+ P+ VT NTLI  YCK G T  A ++  RM+++G   D  T+ +LI
Sbjct: 226 EARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLI 285

Query: 416 HGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLC 475
            GFC+  ++D A E+L  M     +P+  +Y+ L+ G C+        +LL E   RG+ 
Sbjct: 286 SGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGIL 345

Query: 476 VDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDI 535
            D+  Y +LI  FC+  +++ A ++ NLM   G++ D + Y +LA A  ++        +
Sbjct: 346 PDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFAL 405

Query: 536 LDDMY 540
           LD+M+
Sbjct: 406 LDNMF 410



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 109/335 (32%), Positives = 175/335 (52%), Gaps = 2/335 (0%)

Query: 170 VLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFK 229
           +L++ L K        ++ ++M + G+V ++  YN LI   CKS  +++  +LL  M  +
Sbjct: 178 ILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKR 237

Query: 230 DVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA 289
            VR +L TYNTLI  YCK G    A  + +RM + G  PD+VT+NSLI GFC++ ++ +A
Sbjct: 238 KVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKA 297

Query: 290 RRLFRDIKGA--TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRK 347
             +   +K     PN VTY  LI G C A    EA  L   M  +G+ P ++TYNS++  
Sbjct: 298 CEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGI 357

Query: 348 LCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLD 407
            C+  +I  A ++ N M E+ + PD ++  TL  A  K      A  + + M +AG + +
Sbjct: 358 FCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPN 417

Query: 408 QFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLD 467
            FT+ +L+ G C ++ +D A+ LL  M   G  P+  +Y  LV G C     +   ++L 
Sbjct: 418 LFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLV 477

Query: 468 EFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             VS G+   VS    ++    ++ K D A   F+
Sbjct: 478 MMVSEGIQPLVSSSGTIVHTLAREGKQDLALHYFD 512



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 111/368 (30%), Positives = 190/368 (51%), Gaps = 22/368 (5%)

Query: 202 LYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRM 261
           L+N+L+H  CK++ + +  +++ EM  + +  D+ TYN+LI   CK     EA  + + M
Sbjct: 175 LFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETM 234

Query: 262 EREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDL 319
            +  + P++VTYN+LI+G+C+ G    A +L   +   G  P+ VT+ +LI G+C+ + +
Sbjct: 235 VKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKI 294

Query: 320 EEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTL 379
           ++A  +  +M      P +VTYN ++  LC  GR  +A  LL+EM+ + I PD +T N+L
Sbjct: 295 DKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSL 354

Query: 380 INAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGF 439
           I  +C+      A +++N M+E G++ D  +Y  L     K++  D A  LL  M DAG 
Sbjct: 355 IGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGA 414

Query: 440 SPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQR 499
            P+  +++ L++G C     +    LL      G     S Y  L+   CK  +VD A+ 
Sbjct: 415 IPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKE 474

Query: 500 LFNLMQGNGIL-----GDSVIYT-------SLAYAYWR---AGEPKACSDILDDMYRRRL 544
           +  +M   GI        ++++T        LA  Y+    A E KAC     D   ++L
Sbjct: 475 VLVMMVSEGIQPLVSSSGTIVHTLAREGKQDLALHYFDQVVAAESKAC-----DPSYQKL 529

Query: 545 MITLKIYR 552
           +  +K+ R
Sbjct: 530 LEFVKVLR 537



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 97/316 (30%), Positives = 159/316 (50%), Gaps = 7/316 (2%)

Query: 272 TYNSLIHGFCREGRMREARRLFRDI---KGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
           T N L+    +  R  +A ++FRD    +    NH+TY TLI G+C+A D+E A +L   
Sbjct: 71  TCNCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLLAE 130

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M  +G  P VVT++SI++ LC  G +  A +   E  E   APD+V  N L++  CK   
Sbjct: 131 MKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRESVE--CAPDSVLFNILVHGLCKANQ 188

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
            + A ++   M E G++ D  TY +LI G CK+  M+ A++LL  M+     P+  +Y+ 
Sbjct: 189 LSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNT 248

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG 508
           L+ GYC         +L++  +  G   DV  + +LI  FC+K K+D A  + +LM+   
Sbjct: 249 LIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGL 308

Query: 509 ILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLF 568
              + V Y  L      AG      ++L +M  R ++  +  Y S    + ++ +I   F
Sbjct: 309 CAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAF 368

Query: 569 WSH--VVDRGLMSKHI 582
                +V+RG++   I
Sbjct: 369 QIQNLMVERGVIPDGI 384



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 91/346 (26%), Positives = 159/346 (45%), Gaps = 19/346 (5%)

Query: 84  MIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANL 143
           ++H L K      A+ M+E+++ R  +      N+L+      DG             + 
Sbjct: 179 LVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLI------DG----------LCKSY 222

Query: 144 KMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLY 203
           +M ++  Q+ + M    + P+L     L+    K   T +  ++ ++M+Q G   ++  +
Sbjct: 223 RM-EEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTF 281

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER 263
           N LI   C+ S +DK  ++L  M+      +L TYN LI+  C  G   EA  +   M+ 
Sbjct: 282 NSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDG 341

Query: 264 EGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEE 321
            GI PDI+TYNSLI  FCR  ++ +A ++   +  +G  P+ ++Y TL     ++   +E
Sbjct: 342 RGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDE 401

Query: 322 ALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
           A  L + M   G  P + T+NS++  LC   R+ +A  LL  M      P   T   L+ 
Sbjct: 402 AFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVT 461

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIA 427
             CK G    A +V   M+  G+     +   ++H   +  + D+A
Sbjct: 462 GLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLAREGKQDLA 507


>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
          Length = 688

 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 127/442 (28%), Positives = 221/442 (50%), Gaps = 17/442 (3%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG-VVANIHLYNVL 206
           + + + D+M    L P       +++ + K   T     + +KM ++  ++ N+ +Y+ +
Sbjct: 202 EAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAI 261

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           I + CK       + L  EM+ K +  DLFTYN++I  +C  G   +A  +   M    I
Sbjct: 262 IDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKI 321

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
           SPD+VTYN+LI+ F +EG+  EA  L+ ++  +G  PN +TY ++IDG+C+ + L+ A  
Sbjct: 322 SPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAED 381

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           +  +MA KG  P V T+ +++   C   RI D   LL+EM  + +  + VT NTLI+ +C
Sbjct: 382 MFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFC 441

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGM------LDA- 437
            +GD  +A+ +  +M+ +G+  D  T   L+ G C   ++  A E+   M      LDA 
Sbjct: 442 LVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDAS 501

Query: 438 ----GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEK 493
               G  P   +Y+ L+ G  N+       +L +E   RG+  D   Y ++I   CK+ +
Sbjct: 502 HPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSR 561

Query: 494 VDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRS 553
           +D A ++F  M       + V + +L   Y +AG      ++  +M RR ++    IY +
Sbjct: 562 LDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYIT 621

Query: 554 FSASYAKDNEI---LDLFWSHV 572
               + K   I   LD+F   +
Sbjct: 622 LIYGFRKVGNINGALDIFQEMI 643



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 121/431 (28%), Positives = 206/431 (47%), Gaps = 48/431 (11%)

Query: 157 RVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDV 216
            V +++P++   + +++SL KD        ++ +M + G+  ++  YN +I   C S   
Sbjct: 247 EVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRW 306

Query: 217 DKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSL 276
              E+LL EM  + +  D+ TYN LI  + K+G  +EA  + D M   GI P+ +TYNS+
Sbjct: 307 SDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSM 366

Query: 277 IHGFCREGRMREARRLF--RDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGV 334
           I GFC++ R+  A  +F     KG +P+  T+TTLIDGYC A  +++ + L   M  +G+
Sbjct: 367 IDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGL 426

Query: 335 YPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMK 394
               VTYN+++   C  G +  A  L  +M    + PD VTCNTL++  C  G    A++
Sbjct: 427 VANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALE 486

Query: 395 V------------------------------------KNRMLEA----------GLMLDQ 408
           +                                    + + LEA          G++ D 
Sbjct: 487 MFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDT 546

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
            TY ++I G CK   +D A ++   M    FSP+  +++ L++GYC     +  L+L  E
Sbjct: 547 ITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCE 606

Query: 469 FVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
              RG+  D  +Y  LI  F K   ++ A  +F  M  +G+  D++   ++   +W   E
Sbjct: 607 MGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEE 666

Query: 529 PKACSDILDDM 539
            +    +L+D+
Sbjct: 667 LERAVAMLEDL 677



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 122/441 (27%), Positives = 216/441 (48%), Gaps = 11/441 (2%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           + ++ +M    +   +++  +L+               + K+ +LG+  ++  +  L+H 
Sbjct: 99  ISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHG 158

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
            C    V +      +M     R ++ T+ TL+   C++G   EA+A+ DRM  +G+ P 
Sbjct: 159 LCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPT 218

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDIKGAT---PNHVTYTTLIDGYCRANDLEEALRLR 326
            +TY +++ G C++G    A  L R ++  +   PN V Y+ +ID  C+     +A  L 
Sbjct: 219 QITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLF 278

Query: 327 EVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKI 386
             M  KG++P + TYNS++   C  GR  DA +LL EM E+KI+PD VT N LINA+ K 
Sbjct: 279 TEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKE 338

Query: 387 GDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSY 446
           G    A ++ + ML  G++ +  TY ++I GFCK   +D A+++ + M   G SP   ++
Sbjct: 339 GKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTF 398

Query: 447 SWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQG 506
           + L+DGYC     +  ++LL E   RGL  +   Y  LI  FC    ++ A  L   M  
Sbjct: 399 TTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMIS 458

Query: 507 NGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
           +G+  D V   +L       G+ K   ++   M + ++           AS+  +    D
Sbjct: 459 SGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKM--------DLDASHPFNGVEPD 510

Query: 567 LFWSHVVDRGLMSKHIFKEMQ 587
           +   +++  GL+++  F E +
Sbjct: 511 VLTYNILICGLINEGKFLEAE 531



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 111/341 (32%), Positives = 181/341 (53%), Gaps = 3/341 (0%)

Query: 217 DKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSL 276
           D V  L  +ME K +R D++++N LI  +C       AL+   ++ + G+ PD+VT+ +L
Sbjct: 96  DLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTL 155

Query: 277 IHGFCREGRMREARRLFRDIKGAT--PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGV 334
           +HG C E R+ EA   F  +   T  PN VT+TTL++G CR   + EA+ L + M   G+
Sbjct: 156 LHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGL 215

Query: 335 YPGVVTYNSILRKLCKEGRIRDANRLLNEMNE-KKIAPDNVTCNTLINAYCKIGDTASAM 393
            P  +TY +I+  +CK+G    A  LL +M E   I P+ V  + +I++ CK G  + A 
Sbjct: 216 QPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQ 275

Query: 394 KVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGY 453
            +   M E G+  D FTY ++I GFC +     A++LL  ML+   SP   +Y+ L++ +
Sbjct: 276 NLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAF 335

Query: 454 CNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDS 513
             +       +L DE + RG+  +   Y ++I  FCK++++D A+ +F LM   G   D 
Sbjct: 336 VKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDV 395

Query: 514 VIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSF 554
             +T+L   Y  A       ++L +M RR L+     Y + 
Sbjct: 396 FTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTL 436



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 107/371 (28%), Positives = 170/371 (45%), Gaps = 13/371 (3%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D  Q+  +M    + P +     L+N+  K+       ++Y +M+  G++ N   YN +I
Sbjct: 308 DAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMI 367

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
              CK   +D  E +   M  K    D+FT+ TLI  YC      + + +   M R G+ 
Sbjct: 368 DGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLV 427

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
            + VTYN+LIHGFC  G +  A  L + +   G  P+ VT  TL+DG C    L++AL +
Sbjct: 428 ANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEM 487

Query: 326 REVMAAK-----------GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNV 374
            + M              GV P V+TYN ++  L  EG+  +A  L  EM  + I PD +
Sbjct: 488 FKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTI 547

Query: 375 TCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGM 434
           T +++I+  CK      A ++   M       +  T+  LI+G+CKA  +D   EL   M
Sbjct: 548 TYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEM 607

Query: 435 LDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKV 494
              G       Y  L+ G+    N    L +  E +S G+  D    R ++  F  KE++
Sbjct: 608 GRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEEL 667

Query: 495 DYAQRLFNLMQ 505
           + A  +   +Q
Sbjct: 668 ERAVAMLEDLQ 678



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 104/385 (27%), Positives = 184/385 (47%), Gaps = 34/385 (8%)

Query: 98  QNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMR 157
           Q MLE+    D ++  +++NA VK     +G          F+       +  +++D+M 
Sbjct: 314 QEMLERKISPDVVTYNALINAFVK-----EGK---------FF-------EAAELYDEML 352

Query: 158 VHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVD 217
              ++P+      +++   K    D    ++  M   G   ++  +  LI   C +  +D
Sbjct: 353 PRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRID 412

Query: 218 KVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLI 277
              +LL EM  + + A+  TYNTLI  +C  G    AL +  +M   G+ PDIVT N+L+
Sbjct: 413 DGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLL 472

Query: 278 HGFCREGRMREARRLFRDIK-------------GATPNHVTYTTLIDGYCRANDLEEALR 324
            G C  G++++A  +F+ ++             G  P+ +TY  LI G        EA  
Sbjct: 473 DGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEE 532

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           L E M  +G+ P  +TY+S++  LCK+ R+ +A ++   M  K  +P+ VT NTLIN YC
Sbjct: 533 LYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYC 592

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           K G     +++   M   G++ D   Y  LI+GF K   ++ A ++   M+ +G  P   
Sbjct: 593 KAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTI 652

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEF 469
           +   ++ G+ +K   E  + +L++ 
Sbjct: 653 TIRNMLTGFWSKEELERAVAMLEDL 677



 Score =  118 bits (295), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 95/381 (24%), Positives = 162/381 (42%), Gaps = 28/381 (7%)

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRM-EREGIS-- 267
           C SS  +   +L C    +D  A     +      C+ G   E+L +Q    E +G+   
Sbjct: 10  CSSSPAESAARLFCTRSIRDTLAKASGES------CEAGFGGESLKLQSGFHEIKGLEDA 63

Query: 268 -------------PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDG 312
                        P +V +  L+    R  R      L++ +  K    +  ++  LI  
Sbjct: 64  IDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKC 123

Query: 313 YCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPD 372
           +C  + L  AL     +   G++P VVT+ ++L  LC E R+ +A    ++M E    P+
Sbjct: 124 FCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPN 183

Query: 373 NVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLF 432
            VT  TL+N  C+ G    A+ + +RM+E GL   Q TY  ++ G CK  +   A  LL 
Sbjct: 184 VVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLR 243

Query: 433 GMLDAG-FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
            M +     P+   YS ++D  C          L  E   +G+  D+  Y ++I  FC  
Sbjct: 244 KMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSS 303

Query: 492 EKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIY 551
            +   A++L   M    I  D V Y +L  A+ + G+    +++ D+M  R ++     Y
Sbjct: 304 GRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITY 363

Query: 552 RSFSASYAKDNEI---LDLFW 569
            S    + K + +    D+F+
Sbjct: 364 NSMIDGFCKQDRLDAAEDMFY 384


>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
 gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
          Length = 440

 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 140/435 (32%), Positives = 222/435 (51%), Gaps = 11/435 (2%)

Query: 156 MRVHNLMPHLHACTVLLNSLAKD-RLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSS 214
           MR H   P+      LL+ L    R++D    +Y++M++ G   ++  YN L+H  CK  
Sbjct: 1   MRKHGFWPNRITYNALLSGLCNGGRMSD-AQALYERMIKAGYSPDVVTYNTLLHGFCKVG 59

Query: 215 DVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYN 274
           ++D+  K+      +    D+ TYN LI  +CK     EA  +  RM  E + PD+VTYN
Sbjct: 60  ELDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYN 119

Query: 275 SLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRA-NDLEEALRLREVMAAKG 333
           SL++G C+ GR+ EAR L  D KG +PN +TY+TLI G CR    + EAL+L   +  +G
Sbjct: 120 SLVNGLCKNGRVDEARMLIVD-KGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQG 178

Query: 334 VYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAM 393
             P V TYN ++  L KE R+ +A  L + + +  + PD +T    I+  CK G    A+
Sbjct: 179 YEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDAL 238

Query: 394 KVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGY 453
            +   M E G + D  ++ A+I+G CK K +D A+ LL GM   G SP+  S++ L+ G 
Sbjct: 239 LMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQ 298

Query: 454 CNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCK---KEKVDYAQRLFNLMQGNGIL 510
           C     +  +    E + RG+   V  Y  L+   CK   + ++  A  LF+ M   G +
Sbjct: 299 CRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRV 358

Query: 511 GDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYA---KDNEILDL 567
            D V Y++L     +AG+      +L  M  +  +  +  Y S  +      K +E L+L
Sbjct: 359 PDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALEL 418

Query: 568 FWSHVVDRGLMSKHI 582
           F + +V++G +   I
Sbjct: 419 FVA-MVEKGCVPDTI 432



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 129/413 (31%), Positives = 213/413 (51%), Gaps = 17/413 (4%)

Query: 119 LVKIHDDPDGNSHVLSWLVIFYANLKMTQ--DGLQVFDQMRVHNLMPHLHACTVLLNSLA 176
           ++K    PD    V+++  + +   K+ +  + L++FD       +P +     L+N   
Sbjct: 36  MIKAGYSPD----VVTYNTLLHGFCKVGELDEALKIFDGAVKRGFVPDVVTYNALINGFC 91

Query: 177 KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLF 236
           K    D   ++ ++MV   +V ++  YN L++  CK+  VD+   L+ +  F     ++ 
Sbjct: 92  KADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNGRVDEARMLIVDKGFS---PNVI 148

Query: 237 TYNTLIALYCK--KGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR 294
           TY+TLI+  C+  +G+  EAL +   + ++G  P++ TYN LI G  +E R+ EA  LF 
Sbjct: 149 TYSTLISGLCRELRGVS-EALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFS 207

Query: 295 DI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEG 352
            +   G  P+ +TYT  IDG C+A  +E+AL + + M  KG  P VV++N+++  LCKE 
Sbjct: 208 GLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEK 267

Query: 353 RIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYK 412
           R+ +A  LL+ M  K  +P+ ++ NTLI   C+ G    AM     ML+ G+     TY 
Sbjct: 268 RVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYN 327

Query: 413 ALIHGFCKAKEMDIAKE---LLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEF 469
            L+ G CKA++    KE   L   M++ G  P   +YS L+DG       +   +LL   
Sbjct: 328 ILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAM 387

Query: 470 VSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYA 522
            ++G   +V  Y +LI   C  EKVD A  LF  M   G + D++ Y ++  A
Sbjct: 388 EAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGCVPDTITYGTIISA 440



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 100/387 (25%), Positives = 191/387 (49%), Gaps = 21/387 (5%)

Query: 50  LYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIA---- 105
           L+  C +  L  A   +  +    +   + ++  +I+   K      AQ +L+++     
Sbjct: 52  LHGFCKVGELDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENL 111

Query: 106 LRDFLSTPSVLNALVK---------IHDDPDGNSHVLSWLVIFYA---NLKMTQDGLQVF 153
           + D ++  S++N L K         +  D   + +V+++  +       L+   + L++F
Sbjct: 112 VPDVVTYNSLVNGLCKNGRVDEARMLIVDKGFSPNVITYSTLISGLCRELRGVSEALKLF 171

Query: 154 DQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKS 213
             +      P +    +L++ L K+   +  ++++  +V+ G+  +   Y V I   CK+
Sbjct: 172 GSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKA 231

Query: 214 SDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTY 273
             V+    +L +M+ K    D+ ++N +I   CK+    EA  +   ME +G SP+ +++
Sbjct: 232 GRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISF 291

Query: 274 NSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRAND---LEEALRLREV 328
           N+LI G CR G+ ++A   F+++  +G  P  VTY  L+DG C+A     ++EA+ L + 
Sbjct: 292 NTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDA 351

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M  KG  P VVTY++++  L K G++ DA RLL  M  K   P+  T N+LI+  C +  
Sbjct: 352 MIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEK 411

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALI 415
              A+++   M+E G + D  TY  +I
Sbjct: 412 VDEALELFVAMVEKGCVPDTITYGTII 438


>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
 gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
 gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
 gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 566

 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 121/362 (33%), Positives = 197/362 (54%), Gaps = 2/362 (0%)

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
           P++   T L++   K    +    ++ +M +LG+VAN   Y VLI+   K+    +  ++
Sbjct: 196 PNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEM 255

Query: 223 LCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR 282
             +M+   V  +L+TYN ++   CK G   +A  V D M   G+S +IVTYN+LI G CR
Sbjct: 256 YEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCR 315

Query: 283 EGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVT 340
           E ++ EA ++   +K  G  PN +TY TLIDG+C    L +AL L   + ++G+ P +VT
Sbjct: 316 EMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVT 375

Query: 341 YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML 400
           YN ++   C++G    A +++ EM E+ I P  VT   LI+ + +  +   A++++  M 
Sbjct: 376 YNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSME 435

Query: 401 EAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEE 460
           E GL+ D  TY  LIHGFC   +M+ A  L   M++    P+   Y+ ++ GYC + +  
Sbjct: 436 ELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSY 495

Query: 461 ALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLA 520
             LKLL E   + L  +V+ YR +I   CK+ K   A+RL   M  +GI   + I + ++
Sbjct: 496 RALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLIS 555

Query: 521 YA 522
            A
Sbjct: 556 RA 557



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 100/298 (33%), Positives = 176/298 (59%), Gaps = 2/298 (0%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           + G +++++M+   + P+L+    ++N L KD  T   ++V+ +M + GV  NI  YN L
Sbjct: 250 KQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTL 309

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           I   C+   +++  K++ +M+   +  +L TYNTLI  +C  G   +AL++   ++  G+
Sbjct: 310 IGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGL 369

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
           SP +VTYN L+ GFCR+G    A ++ +++  +G  P+ VTYT LID + R++++E+A++
Sbjct: 370 SPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQ 429

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           LR  M   G+ P V TY+ ++   C +G++ +A+RL   M EK   P+ V  NT+I  YC
Sbjct: 430 LRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYC 489

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           K G +  A+K+   M E  L  +  +Y+ +I   CK ++   A+ L+  M+D+G  PS
Sbjct: 490 KEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPS 547



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 127/515 (24%), Positives = 242/515 (46%), Gaps = 9/515 (1%)

Query: 44  HKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEK 103
            K L+ L N    P L  AF          ++H+ +S   ++ +L     F  AQ++L +
Sbjct: 6   QKTLVLLANLIKFPPLK-AFSLLNSPNFHEFQHTHESISILLRLLLSGNLFSHAQSLLLQ 64

Query: 104 IAL----RDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVH 159
           +        F ++ S+L+ L +  +       +   ++  Y   +     +  F++M  +
Sbjct: 65  VISGKIHSQFFTSSSLLHYLTE-SETSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDN 123

Query: 160 NLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKV 219
             +P  +    LL  +      +  W  + +  +  VV +++ + +LI  CC++ +++K 
Sbjct: 124 GFVPGSNCFNYLLTFVVGSSSFNQWWSFFNEN-KSKVVLDVYSFGILIKGCCEAGEIEKS 182

Query: 220 EKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHG 279
             LL E+       ++  Y TLI   CKKG   +A  +   M + G+  +  TY  LI+G
Sbjct: 183 FDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLING 242

Query: 280 FCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPG 337
             + G  ++   ++  ++  G  PN  TY  +++  C+    ++A ++ + M  +GV   
Sbjct: 243 LFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCN 302

Query: 338 VVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKN 397
           +VTYN+++  LC+E ++ +AN+++++M    I P+ +T NTLI+ +C +G    A+ +  
Sbjct: 303 IVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCR 362

Query: 398 RMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKN 457
            +   GL     TY  L+ GFC+  +   A +++  M + G  PS  +Y+ L+D +   +
Sbjct: 363 DLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSD 422

Query: 458 NEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYT 517
           N E  ++L       GL  DV  Y  LI  FC K +++ A RLF  M       + VIY 
Sbjct: 423 NMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYN 482

Query: 518 SLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYR 552
           ++   Y + G       +L +M  + L   +  YR
Sbjct: 483 TMILGYCKEGSSYRALKLLKEMEEKELAPNVASYR 517



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 64/133 (48%)

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           L+  +A     +  +Q+   M    L+P +H  +VL++        +   +++K MV+  
Sbjct: 414 LIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKN 473

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
              N  +YN +I   CK     +  KLL EME K++  ++ +Y  +I + CK+    EA 
Sbjct: 474 CEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAE 533

Query: 256 AVQDRMEREGISP 268
            + ++M   GI P
Sbjct: 534 RLVEKMIDSGIDP 546



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 44/203 (21%), Positives = 77/203 (37%), Gaps = 36/203 (17%)

Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSP-SYC------------------------- 444
           Y+ +I+ + +++ ++++      M+D GF P S C                         
Sbjct: 97  YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENK 156

Query: 445 --------SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDY 496
                   S+  L+ G C     E    LL E    G   +V +Y  LI   CKK +++ 
Sbjct: 157 SKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEK 216

Query: 497 AQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSA 556
           A+ LF  M   G++ +   YT L    ++ G  K   ++ + M    +   L  Y     
Sbjct: 217 AKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMN 276

Query: 557 SYAKDNEILDLF--WSHVVDRGL 577
              KD    D F  +  + +RG+
Sbjct: 277 QLCKDGRTKDAFQVFDEMRERGV 299


>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 579

 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 138/476 (28%), Positives = 224/476 (47%), Gaps = 20/476 (4%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           SVL  ++K+   PD  +   + +   Y   K+ +  L +FD+M      P +     L+N
Sbjct: 117 SVLAKILKLGHQPD-TATFTTLIRGIYVEGKIGE-ALHLFDKMIGEGFRPDVVTYGTLIN 174

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
            L K   T    ++   MVQ     N+  YN +I + CK   V +   L  EM  K +  
Sbjct: 175 GLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISP 234

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           D+FTYN+LI   C          + + M    I PD+V++N+++   C+EG++ EA  + 
Sbjct: 235 DIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVV 294

Query: 294 RDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
             +  +G  PN VTYT L+DG+C  ++++EA+++ + M  KG  P V++YN+++   CK 
Sbjct: 295 DKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKI 354

Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
            RI  A  L  EM  +++ PD VT +TLI+  C +     A+ + + M+    + +  TY
Sbjct: 355 QRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTY 414

Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
           + L+   CK + +  A  LL  +  +   P     +  +DG C     EA   L     S
Sbjct: 415 RILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSS 474

Query: 472 RGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKA 531
           +GL  DV  Y  +I   C++  +D A +LF  M  NG   +  IY ++   + R  E   
Sbjct: 475 KGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSR 534

Query: 532 CSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMS--KHIFKE 585
              +L +M          + R FSA    D   + LF   + D GL    K I +E
Sbjct: 535 AIQLLQEM----------VARGFSA----DASTMTLFVKMLSDDGLDQSLKQILRE 576



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 121/374 (32%), Positives = 184/374 (49%), Gaps = 3/374 (0%)

Query: 146 TQDG-LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYN 204
           T DG +  F++M      P       LL S+AK +    +  +  +M   G+  NI+  +
Sbjct: 41  TIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLH 100

Query: 205 VLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMERE 264
           +LI++ C  + V     +L ++     + D  T+ TLI     +G   EAL + D+M  E
Sbjct: 101 ILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGE 160

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEA 322
           G  PD+VTY +LI+G C+ G    A RL   +  K   PN   Y T+ID  C+   + EA
Sbjct: 161 GFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEA 220

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
             L   M  KG+ P + TYNS++  LC     +    LLNEM + KI PD V+ NT+++A
Sbjct: 221 FNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDA 280

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
            CK G    A  V ++M++ G+  +  TY AL+ G C   EMD A ++   M+  G  P+
Sbjct: 281 LCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPN 340

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             SY+ L++GYC     +  + L  E   + L  D   Y  LI   C  E++  A  LF+
Sbjct: 341 VISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFH 400

Query: 503 LMQGNGILGDSVIY 516
            M     + + V Y
Sbjct: 401 EMVACSQIPNLVTY 414



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 97/343 (28%), Positives = 178/343 (51%), Gaps = 2/343 (0%)

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
           D     + +M+++    +   +N L+ +  K      +  L  +M+   +  +++T + L
Sbjct: 43  DGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHIL 102

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGA 299
           I  +C       A +V  ++ + G  PD  T+ +LI G   EG++ EA  LF  +  +G 
Sbjct: 103 INSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGF 162

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
            P+ VTY TLI+G C+  +   A+RL   M  K   P V  YN+I+  LCK+ ++ +A  
Sbjct: 163 RPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFN 222

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
           L +EM  K I+PD  T N+LI+A C + +      + N M+++ +M D  ++  ++   C
Sbjct: 223 LFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALC 282

Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
           K  ++  A +++  M+  G  P+  +Y+ L+DG+C  +  +  +K+ D  V +G   +V 
Sbjct: 283 KEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVI 342

Query: 480 VYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYA 522
            Y  LI  +CK +++D A  LF  M    ++ D+V Y++L + 
Sbjct: 343 SYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHG 385



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 110/419 (26%), Positives = 193/419 (46%), Gaps = 19/419 (4%)

Query: 54  CHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTP 113
           C + + S A          N + ++ ++ T+I  L K++    A N+  ++  +      
Sbjct: 177 CKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDI 236

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
              N+L+          H L        NL   +    + ++M    +MP + +   +++
Sbjct: 237 FTYNSLI----------HAL-------CNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVD 279

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
           +L K+        V  KM+Q GV  N+  Y  L+   C  S++D+  K+   M  K    
Sbjct: 280 ALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMP 339

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           ++ +YNTLI  YCK     +A+ +   M R+ + PD VTY++LIHG C   R+++A  LF
Sbjct: 340 NVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALF 399

Query: 294 RDIKGAT--PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
            ++   +  PN VTY  L+D  C+   L EA+ L + +    + P +   N  +  +C+ 
Sbjct: 400 HEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRA 459

Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
           G +  A  L + ++ K + PD  T + +IN  C+ G    A K+   M E G  L+   Y
Sbjct: 460 GELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIY 519

Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFV 470
             +  GF +  E   A +LL  M+  GFS    + +  V    +   +++L ++L EFV
Sbjct: 520 NTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQILREFV 578



 Score =  125 bits (313), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 86/326 (26%), Positives = 146/326 (44%), Gaps = 12/326 (3%)

Query: 248 KGMHYE----ALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR-----DIKG 298
           K +H+     A++  +RM R    P  V +N L+       +M+    L       D  G
Sbjct: 35  KSLHFNTIDGAISSFNRMLRMQPPPSTVDFNKLLTSI---AKMKHHSTLLSLSHQMDSFG 91

Query: 299 ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDAN 358
             PN  T   LI+ +C  N +  A  +   +   G  P   T+ +++R +  EG+I +A 
Sbjct: 92  IPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEAL 151

Query: 359 RLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGF 418
            L ++M  +   PD VT  TLIN  CK+G+T++A+++   M++     + F Y  +I   
Sbjct: 152 HLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSL 211

Query: 419 CKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDV 478
           CK +++  A  L   M+  G SP   +Y+ L+   CN    + +  LL+E V   +  DV
Sbjct: 212 CKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDV 271

Query: 479 SVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDD 538
             +  ++   CK+ KV  A  + + M   G+  + V YT+L   +    E      + D 
Sbjct: 272 VSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDT 331

Query: 539 MYRRRLMITLKIYRSFSASYAKDNEI 564
           M  +  M  +  Y +    Y K   I
Sbjct: 332 MVCKGCMPNVISYNTLINGYCKIQRI 357



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 61/231 (26%), Positives = 104/231 (45%)

Query: 336 PGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKV 395
           P  V +N +L  + K         L ++M+   I P+  T + LIN++C +     A  V
Sbjct: 59  PSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSV 118

Query: 396 KNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCN 455
             ++L+ G   D  T+  LI G     ++  A  L   M+  GF P   +Y  L++G C 
Sbjct: 119 LAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCK 178

Query: 456 KNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVI 515
             N  A ++LL   V +    +V  Y  +I   CK  +V  A  LF+ M   GI  D   
Sbjct: 179 VGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFT 238

Query: 516 YTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
           Y SL +A     E K  + +L++M   ++M  +  + +   +  K+ ++ +
Sbjct: 239 YNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTE 289



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/195 (24%), Positives = 78/195 (40%), Gaps = 3/195 (1%)

Query: 391 SAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLV 450
            A+   NRML          +  L+    K K       L   M   G  P+  +   L+
Sbjct: 44  GAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILI 103

Query: 451 DGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGIL 510
           + +C+ N       +L + +  G   D + +  LIR    + K+  A  LF+ M G G  
Sbjct: 104 NSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFR 163

Query: 511 GDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLF-- 568
            D V Y +L     + G   A   +L  M ++     +  Y +   S  KD ++ + F  
Sbjct: 164 PDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNL 223

Query: 569 WSHVVDRGLMSKHIF 583
           +S +V +G+ S  IF
Sbjct: 224 FSEMVTKGI-SPDIF 237



 Score = 41.6 bits (96), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 42/206 (20%), Positives = 87/206 (42%), Gaps = 27/206 (13%)

Query: 50  LYNCCHIPSLSCAFFKWAE----SAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIA 105
           ++  CH+  L  A   + E    S +PN    L ++  ++  L KN++   A  +L+ I 
Sbjct: 383 IHGLCHVERLQDAIALFHEMVACSQIPN----LVTYRILLDYLCKNRYLAEAMALLKAIE 438

Query: 106 LRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYAN-LKMTQDGLQVFDQMRVHNLMPH 164
             +                DPD   + ++   +  A  L+  +D   +F  +    L P 
Sbjct: 439 GSNL---------------DPDIQVNNIAIDGMCRAGELEAARD---LFSNLSSKGLQPD 480

Query: 165 LHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLC 224
           +   ++++N L +  L D   K++++M + G   N  +YN +     ++++  +  +LL 
Sbjct: 481 VWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQ 540

Query: 225 EMEFKDVRADLFTYNTLIALYCKKGM 250
           EM  +   AD  T    + +    G+
Sbjct: 541 EMVARGFSADASTMTLFVKMLSDDGL 566


>gi|302820627|ref|XP_002991980.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
 gi|300140222|gb|EFJ06948.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
          Length = 509

 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 137/476 (28%), Positives = 224/476 (47%), Gaps = 20/476 (4%)

Query: 63  FFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSA----QNMLEKIALRDFLSTPSVLNA 118
           FF+WA+ A P ++H+  +  +++ +   +   + A    ++ L  +   D  +  +++  
Sbjct: 3   FFQWAK-ARPGFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRG 61

Query: 119 LVKIHDDPDG--------NSHVLSWLVIFYA------NLKMTQDGLQVFDQMRVHNLMPH 164
             K    P           + +   +V F +       L  T   LQ+F QM    + P 
Sbjct: 62  FCKAEQIPQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPD 121

Query: 165 LHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLC 224
               TV++  L K    D+    +++MVQ G + +   Y VL+H+  K+   ++  ++  
Sbjct: 122 AFLYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFE 181

Query: 225 EMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREG 284
           EM  K    +L TY T++  YCK G   +AL++  R++  G SP    Y++LI G C+  
Sbjct: 182 EMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHD 241

Query: 285 RMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSI 344
           R  EAR LF    G   + + YT+ I G C+A  L+EA  +   M   G  P  V+YN I
Sbjct: 242 RHDEARELFEMAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVI 301

Query: 345 LRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGL 404
           +  LCK+ R+ +A  L+++  E+K  P    C  L++  CK      A  +  RMLE G 
Sbjct: 302 IYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGD 361

Query: 405 MLDQ-FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALL 463
                 TY A+I G CKA  +D A  +L  M  AG  P   +Y+ ++D +C     +   
Sbjct: 362 RAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEAR 421

Query: 464 KLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
           +L      RG  +DV  Y  LIR +C+  KVD A  +   M G GI  + V  +++
Sbjct: 422 ELFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTI 477



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 107/321 (33%), Positives = 163/321 (50%), Gaps = 6/321 (1%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           + G Q+F++M      P L     ++N   K    D    + +++   G   +  LY+ L
Sbjct: 174 EQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTL 233

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           I   CK    D+  +L  EM   DV+ D+  Y + I+  CK G   EA AV  +M   G 
Sbjct: 234 IDGLCKHDRHDEARELF-EMAAGDVQ-DVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGC 291

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
           +PD V+YN +I+  C++ R+ EA+ L      +   P     T L+DG C++  +EEA  
Sbjct: 292 APDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACV 351

Query: 325 LREVMAAKG-VYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
           + E M   G   P VVTY++++  LCK  R+ DA  +L +M      PD VT   +I+A+
Sbjct: 352 ILERMLETGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAF 411

Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY 443
           CK+G    A ++  RM E G  LD   Y  LI G+C+A ++D A  ++  M   G  P+ 
Sbjct: 412 CKVGRLDEARELFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNV 471

Query: 444 CSYSWLVDGYCNKNN-EEALL 463
            S S +VDG C ++  EEA L
Sbjct: 472 VSLSTIVDGLCKESRVEEARL 492



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 112/439 (25%), Positives = 192/439 (43%), Gaps = 5/439 (1%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N++  + L+  + N    ++  +VF    V    P       L+    K         + 
Sbjct: 16  NTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIPQAVNLL 75

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
            +M   G+   I  +  LI   C+ +  DK  ++  +M    V+ D F Y  +I   CK 
Sbjct: 76  GEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGHLCKI 135

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTY 306
                A +  +RM + G  PD VTY  L+H   +  +  +  ++F ++  KG +P  VTY
Sbjct: 136 NKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTY 195

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
            T+++GYC+A  +++AL L   +   G  P    Y++++  LCK  R  D  R L EM  
Sbjct: 196 ATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDR-HDEARELFEMAA 254

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
             +  D +   + I+  CK G    A  V  +M+EAG   D  +Y  +I+  CK   +  
Sbjct: 255 GDVQ-DVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSE 313

Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG-LCVDVSVYRALI 485
           AKEL+   ++    P     + LVDG C     E    +L+  +  G     V  Y A+I
Sbjct: 314 AKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPSVVTYSAVI 373

Query: 486 RRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
              CK +++D A  +   M+  G + D V YT++  A+ + G      ++   M+ R   
Sbjct: 374 DGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCA 433

Query: 546 ITLKIYRSFSASYAKDNEI 564
           + +  Y      Y +  ++
Sbjct: 434 LDVVAYNILIRGYCRAAKV 452



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 71/207 (34%), Positives = 116/207 (56%), Gaps = 4/207 (1%)

Query: 170 VLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEM-EF 228
           V++ SL KD       ++  + ++   +  + +  VL+   CKS  V++   +L  M E 
Sbjct: 300 VIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLET 359

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
            D    + TY+ +I   CK     +A  V  +M R G  PD+VTY ++I  FC+ GR+ E
Sbjct: 360 GDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDE 419

Query: 289 ARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILR 346
           AR LF+ +  +G   + V Y  LI GYCRA  ++EA+ + E MA +G+ P VV+ ++I+ 
Sbjct: 420 ARELFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVD 479

Query: 347 KLCKEGRIRDANRLLNEMNEKKIAPDN 373
            LCKE R+ +A  L+ +MN + + PD+
Sbjct: 480 GLCKESRVEEARLLMEKMNFESL-PDS 505



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 49/198 (24%), Positives = 78/198 (39%)

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
           A  G      T NS+L     +G  R+A R+  +       PD+ T  TLI  +CK    
Sbjct: 9   ARPGFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQI 68

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
             A+ +   M  AG+     T+ +LI   C+    D A ++   M+D    P    Y+ +
Sbjct: 69  PQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVV 128

Query: 450 VDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGI 509
           +   C  N  +      +  V  G   D   Y  L+    K  K +   ++F  M   G 
Sbjct: 129 IGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGH 188

Query: 510 LGDSVIYTSLAYAYWRAG 527
             + V Y ++   Y +AG
Sbjct: 189 SPELVTYATVVNGYCKAG 206



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/209 (19%), Positives = 94/209 (44%), Gaps = 20/209 (9%)

Query: 80  SHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALV-----------------KI 122
           S+  +I+ L K+     A+ ++++   R  +    V   LV                 ++
Sbjct: 297 SYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERM 356

Query: 123 HDDPDGNSHVLSWLVIFYANLKMTQ--DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRL 180
            +  D    V+++  +     K  +  D   V  +MR    +P +   T ++++  K   
Sbjct: 357 LETGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGR 416

Query: 181 TDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNT 240
            D   +++++M + G   ++  YN+LI   C+++ VD+   ++ EM  + ++ ++ + +T
Sbjct: 417 LDEARELFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLST 476

Query: 241 LIALYCKKGMHYEALAVQDRMEREGISPD 269
           ++   CK+    EA  + ++M  E + PD
Sbjct: 477 IVDGLCKESRVEEARLLMEKMNFESL-PD 504


>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 729

 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 138/512 (26%), Positives = 245/512 (47%), Gaps = 27/512 (5%)

Query: 50  LYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDF 109
           LY+    P+++  FFK   +  P +K S  +   ++ IL  N   KSA  ++E+I   + 
Sbjct: 112 LYSIREKPTIALRFFKCVLTQ-PGFKTSEYAFCAILQILVDNCLMKSAYWVMERIISFEM 170

Query: 110 LSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACT 169
                                 ++  L+  Y N +     L VF++M  +  +P +  C 
Sbjct: 171 YG--------------------IVDVLIGGYLNYQC----LLVFEKMMRNRFLPDVKNCN 206

Query: 170 VLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFK 229
            +L  L    L     +VY+ M + G+   +  YN ++H+ CK  +V +   L+ +M+ +
Sbjct: 207 RILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQER 266

Query: 230 DVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA 289
                  T+N LI    KKG   +A  +   M + G+     TYN LI G+C++G + EA
Sbjct: 267 GCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEA 326

Query: 290 RRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRK 347
             L+ ++  +G +P   ++ T++ G+C+   + +A +    M  K + P +++YN+++  
Sbjct: 327 LALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYG 386

Query: 348 LCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLD 407
            C+ G I +A  LL+E+  + ++ + VT NTLI+  C++GD  +A+K+K  M+  G+  D
Sbjct: 387 FCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPD 446

Query: 408 QFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLD 467
             TY  L++G CK   M +AKE    ML  G +P   +Y+  + G     +     KL +
Sbjct: 447 VVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQE 506

Query: 468 EFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
           E +++G   DV  Y   +   CK   ++ A  L   M  +G + D V YTS  +A+   G
Sbjct: 507 EMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENG 566

Query: 528 EPKACSDILDDMYRRRLMITLKIYRSFSASYA 559
             +   +I  DM  R    T+  Y     ++A
Sbjct: 567 HLREGREIFYDMLSRGQTPTVVTYTVLIHAHA 598



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 115/438 (26%), Positives = 200/438 (45%), Gaps = 19/438 (4%)

Query: 84  MIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANL 143
           +I+ L+K    + A+ +++++A      +P   N L+                   Y   
Sbjct: 278 LINGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLI-----------------CGYCKK 320

Query: 144 KMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLY 203
            +  + L ++++M    + P + +   ++    K+       +    M++  ++ +I  Y
Sbjct: 321 GLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISY 380

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER 263
           N LI+  C+  ++ +   LL E+ F+++  ++ TYNTLI   C+ G    AL +++ M  
Sbjct: 381 NTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMIN 440

Query: 264 EGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEE 321
            GI PD+VTY  L++G C+ G M  A+  F ++   G  P+   YT  I G  +  D  +
Sbjct: 441 RGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAK 500

Query: 322 ALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
           A +L+E M  KG  P V+TYN  +  LCK G + +A  LL +M      PD+VT  + ++
Sbjct: 501 AFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMH 560

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
           A+ + G      ++   ML  G      TY  LIH       +D A      M + G  P
Sbjct: 561 AHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVP 620

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
           +  +Y+ L++G+C     +   K   E   +G+  +   Y  LI   C   K   A RL+
Sbjct: 621 NVITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALRLY 680

Query: 502 NLMQGNGILGDSVIYTSL 519
             M G  I  DS  + +L
Sbjct: 681 AQMLGKRIRPDSCTHGAL 698



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 96/402 (23%), Positives = 167/402 (41%), Gaps = 59/402 (14%)

Query: 66  WAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQ----NMLEKIALRDFLSTPSVLNALVK 121
           W E        ++ SH T+++   K      A+    +ML+K  + D +S  +++    +
Sbjct: 330 WEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCR 389

Query: 122 IHDDPDGNSHVL---------SWLVIFY-------ANLKMTQDGLQVFDQMRVHNLMPHL 165
           + +   G + +L         S+ ++ Y         L   +  L++ + M    + P +
Sbjct: 390 LGNI--GEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDV 447

Query: 166 HACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCE 225
              TVL+N   K     M  + + +M+ +G+  +   Y   I    K  D  K  KL  E
Sbjct: 448 VTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEE 507

Query: 226 MEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGR 285
           M  K    D+ TYN  +   CK G   EA  +  +M R+G  PD VTY S +H     G 
Sbjct: 508 MLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGH 567

Query: 286 MREARRLFRDI-------------------------------------KGATPNHVTYTT 308
           +RE R +F D+                                     KG  PN +TY  
Sbjct: 568 LREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNV 627

Query: 309 LIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKK 368
           LI+G+C+   +++A +    M  KG++P   TY  ++ + C  G+ ++A RL  +M  K+
Sbjct: 628 LINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALRLYAQMLGKR 687

Query: 369 IAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
           I PD+ T   L+    K     +   +++ +L+    +D  T
Sbjct: 688 IRPDSCTHGALLKKLDKDYKVQAVQFIESLILDGDRTIDANT 729



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 89/209 (42%)

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
           +  +M   +  PD   CN ++           A++V   M E G+     TY  ++H FC
Sbjct: 189 VFEKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTMLHSFC 248

Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
           K  E+  A +L+  M + G  PS  +++ L++G   K   +    L+ E    GL V   
Sbjct: 249 KGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPY 308

Query: 480 VYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
            Y  LI  +CKK  +  A  L+  M   G+      + ++ Y + + G+       L DM
Sbjct: 309 TYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDM 368

Query: 540 YRRRLMITLKIYRSFSASYAKDNEILDLF 568
            ++ LM  +  Y +    + +   I + F
Sbjct: 369 LKKNLMPDIISYNTLIYGFCRLGNIGEAF 397


>gi|449459086|ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
 gi|449501214|ref|XP_004161309.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 908

 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 146/553 (26%), Positives = 258/553 (46%), Gaps = 8/553 (1%)

Query: 9   SDTKFIKTISAIMLKGHWAKLL--NPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKW 66
           +D+ F+  +  I+      K+   N +I+ ++    + KVL+   +      L+  FF +
Sbjct: 36  NDSHFVYVLEQIVRGNQSWKIAFNNSSISGNIEPHHVEKVLIRTLD---DSRLALRFFNF 92

Query: 67  AESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDP 126
                 N+ HS  S   +IH L +N  F  A ++L+ + LR         N         
Sbjct: 93  L-GLHRNFHHSTASFCILIHSLLQNNLFWPASSLLQTLLLRGLNPHQIFENFFESYKKYK 151

Query: 127 DGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWK 186
             +S     L+  Y   K   DG+ V + MR + L+P +   + LLN+LA+ R    V +
Sbjct: 152 FSSSSGFDMLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNALARIRKFRQVLE 211

Query: 187 VYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYC 246
           ++  +V  GV  + ++Y V++   C+  D +K ++++ + E       + TYN  I   C
Sbjct: 212 LFDTLVNAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLC 271

Query: 247 KKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHV 304
           K    +EA+ V+  +  +G+  D+VTY +L+ G CR         +  ++   G  P+  
Sbjct: 272 KSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEA 331

Query: 305 TYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM 364
             + LI+G  +   +E A  L   +   GV P +  YNS++  LCK G++ +A  L + M
Sbjct: 332 AVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVM 391

Query: 365 NEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEM 424
            E+ + P++VT   LI+ + +      A    N+M+E G+    ++Y ++I+  CK  +M
Sbjct: 392 AERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKM 451

Query: 425 DIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRAL 484
            +A+ L   M+D G  P+  +Y+ L+ GYC         KL  E   +G+  +   + AL
Sbjct: 452 KMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTAL 511

Query: 485 IRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL 544
           I   C+  K+  A +LF+ M    IL + V Y  L   + R G      ++LD+M ++ L
Sbjct: 512 ICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGL 571

Query: 545 MITLKIYRSFSAS 557
                 YR   A 
Sbjct: 572 SPDTYTYRPLIAG 584



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 126/465 (27%), Positives = 209/465 (44%), Gaps = 41/465 (8%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           +F  M    L P+    T+L++   +    D+ +  + KM++ G+ A ++ YN +I+  C
Sbjct: 387 LFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQC 446

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           K   +   E L  EM  K ++  + TY +LI+ YCK G+  +A  +   M  +GI+P+ V
Sbjct: 447 KFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTV 506

Query: 272 TYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           T+ +LI G C+  +M EA +LF ++      PN VTY  LI+G+CR  +   A  L + M
Sbjct: 507 TFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEM 566

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
             KG+ P   TY  ++  LC  GR+ +A   +N+++ K    D +    L+  +CK G  
Sbjct: 567 IKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRI 626

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
             A+  +  M+  GL +D  +Y  LI G     +  I  ELL  M   G  P    Y+ L
Sbjct: 627 KEALVARQEMVGRGLQMDLVSYAVLISGALNQND-RILFELLREMHGKGMQPDNVIYTIL 685

Query: 450 VDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM----- 504
           +DG+    N +   +     +  G   +   Y AL+    K   V+ A+ LF  M     
Sbjct: 686 IDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGEA 745

Query: 505 ----------------QGN-------------GILGDSVIYTSLAYAYWRAGEPKACSDI 535
                           +GN             G   ++V Y  L   Y + G+ +  + +
Sbjct: 746 IPNHITYGCFLDHLTKEGNMENALQLHNAMLQGSFANTVTYNILIRGYCQIGKFQEAAKL 805

Query: 536 LDDMYRRRLMITLKIYRSFSASYAKDNEI---LDLFWSHVVDRGL 577
           LD M    ++     Y +F   Y K   +   +D+ W  ++ RGL
Sbjct: 806 LDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDM-WECMLQRGL 849



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 128/459 (27%), Positives = 204/459 (44%), Gaps = 44/459 (9%)

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
           +  +KM +    +F +M    L P +   T L++   KD L    +K+Y +M   G+  N
Sbjct: 448 FGKMKMAE---LLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPN 504

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
              +  LI   C+ + + +  KL  EM    +  +  TYN LI  +C++G    A  + D
Sbjct: 505 TVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLD 564

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRAN 317
            M ++G+SPD  TY  LI G C  GR+ EA+    D+  K    + + YT L+ G+C+  
Sbjct: 565 EMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEG 624

Query: 318 DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCN 377
            ++EAL  R+ M  +G+   +V+Y  ++     +   R    LL EM+ K + PDNV   
Sbjct: 625 RIKEALVARQEMVGRGLQMDLVSYAVLISGALNQND-RILFELLREMHGKGMQPDNVIYT 683

Query: 378 TLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLF----- 432
            LI+ + K G+   A +    M+  G + +  TY AL++G  KA  ++ AK LLF     
Sbjct: 684 ILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEAK-LLFKRMLV 742

Query: 433 -------------------------------GMLDAGFSPSYCSYSWLVDGYCNKNNEEA 461
                                           ML   F+ +  +Y+ L+ GYC     + 
Sbjct: 743 GEAIPNHITYGCFLDHLTKEGNMENALQLHNAMLQGSFANT-VTYNILIRGYCQIGKFQE 801

Query: 462 LLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAY 521
             KLLD  +  G+  D   Y   I  +CK+  VD A  ++  M   G+  D V++  L +
Sbjct: 802 AAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRGLKPDRVVFNFLIH 861

Query: 522 AYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAK 560
           A    GE      + +DM  R L  T   Y S     A+
Sbjct: 862 ACCLNGELDRALQLRNDMMLRGLKPTQSTYHSLMVQLAQ 900



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 115/420 (27%), Positives = 193/420 (45%), Gaps = 37/420 (8%)

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           L+  Y    +     +++ +M    + P+    T L+  L +        K++ +MV+L 
Sbjct: 476 LISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELK 535

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
           ++ N   YNVLI   C+  +  +  +LL EM  K +  D +TY  LIA  C  G   EA 
Sbjct: 536 ILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAK 595

Query: 256 AVQDRMEREGISPDIVTYNSLIHGFCREGRMREA-------------------------- 289
              + +  +    D + Y +L+ GFC+EGR++EA                          
Sbjct: 596 EFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGA 655

Query: 290 -----RRLFRDI-----KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVV 339
                R LF  +     KG  P++V YT LIDG+ ++ +L++A     +M  +G  P  V
Sbjct: 656 LNQNDRILFELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSV 715

Query: 340 TYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRM 399
           TY +++  L K G + +A  L   M   +  P+++T    ++   K G+  +A+++ N M
Sbjct: 716 TYTALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAM 775

Query: 400 LEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNE 459
           L+ G   +  TY  LI G+C+  +   A +LL  M+  G  P   +YS  +  YC + N 
Sbjct: 776 LQ-GSFANTVTYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNV 834

Query: 460 EALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
           +A + + +  + RGL  D  V+  LI   C   ++D A +L N M   G+      Y SL
Sbjct: 835 DAAMDMWECMLQRGLKPDRVVFNFLIHACCLNGELDRALQLRNDMMLRGLKPTQSTYHSL 894



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 117/494 (23%), Positives = 218/494 (44%), Gaps = 55/494 (11%)

Query: 59  LSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNA 118
           L  AF+ + +        ++ S+ +MI+   K    K A+ + +++  +    T +   +
Sbjct: 416 LDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTS 475

Query: 119 LV-------------KIHDDPDG-----NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHN 160
           L+             K++ +  G     N+   + L+     +    +  ++FD+M    
Sbjct: 476 LISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELK 535

Query: 161 LMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVE 220
           ++P+     VL+    ++  T   +++  +M++ G+  + + Y  LI   C +  V + +
Sbjct: 536 ILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAK 595

Query: 221 KLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQ---------------------- 258
           + + ++  K  R D   Y  L+  +CK+G   EAL  +                      
Sbjct: 596 EFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGA 655

Query: 259 ----DR--------MEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHV 304
               DR        M  +G+ PD V Y  LI GF + G +++A   +  +  +G  PN V
Sbjct: 656 LNQNDRILFELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSV 715

Query: 305 TYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM 364
           TYT L++G  +A  + EA  L + M      P  +TY   L  L KEG + +A +L N M
Sbjct: 716 TYTALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAM 775

Query: 365 NEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEM 424
            +   A + VT N LI  YC+IG    A K+ + M+  G++ D  TY   I+ +CK   +
Sbjct: 776 LQGSFA-NTVTYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNV 834

Query: 425 DIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRAL 484
           D A ++   ML  G  P    +++L+   C     +  L+L ++ + RGL    S Y +L
Sbjct: 835 DAAMDMWECMLQRGLKPDRVVFNFLIHACCLNGELDRALQLRNDMMLRGLKPTQSTYHSL 894

Query: 485 IRRFCKKEKVDYAQ 498
           + +  ++ ++   Q
Sbjct: 895 MVQLAQRARLTQVQ 908


>gi|312190399|gb|ADQ43199.1| unknown [Eutrema parvulum]
          Length = 1128

 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 138/470 (29%), Positives = 226/470 (48%), Gaps = 38/470 (8%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIAL-RDFLSTPSVLNALVKIHDDPDGNSH 131
            + H+++S+  + HIL   + +  A ++L +I L +  L    V + L    +       
Sbjct: 5   GFNHTIESYCIVAHILFCARMYYDANSILREIVLSKAELEECDVFDELWSTRNVCVPGFG 64

Query: 132 VLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKM 191
           V   L     +L M ++  Q F +M+   + P   +C  LL+  AK   TD V + +K M
Sbjct: 65  VFDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDM 124

Query: 192 VQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMH 251
           +  G    +  YN++I    K  D++    L  EM+F+ +  D  TYN++I  Y K G  
Sbjct: 125 IGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRL 184

Query: 252 YEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTL 309
            + +   + M+     PD++TYNSLI+ FC+ G++ +    +R++K  G  PN V+Y+TL
Sbjct: 185 DDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTL 244

Query: 310 IDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI 369
           +D +C+ + +++A++    M   G  P   TY S++   CK G + DA RL NEM E  +
Sbjct: 245 VDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGV 304

Query: 370 APDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKE 429
             + VT   LI+  C       A K+  +M+ AG++ +  +Y ALIHGF KAK MD A E
Sbjct: 305 EWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALE 364

Query: 430 LLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFC 489
           LL  +   G  P    Y   + G C     EA   +++E                     
Sbjct: 365 LLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNE--------------------- 403

Query: 490 KKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
                         MQ NGI  +++IYT+L  AY+++G P     +L++M
Sbjct: 404 --------------MQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEM 439



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 121/475 (25%), Positives = 220/475 (46%), Gaps = 22/475 (4%)

Query: 75  KHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLS 134
           K ++ ++  MI  + K    ++A+ + E++  R  +      N+++      DG      
Sbjct: 130 KPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMI------DG------ 177

Query: 135 WLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQL 194
                Y  +    D +  F++M+  +  P +     L+N   K        + Y++M Q 
Sbjct: 178 -----YGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQS 232

Query: 195 GVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEA 254
           G+  N+  Y+ L+ A CK   + +  K   +M       + FTY +L+   CK G   +A
Sbjct: 233 GLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDA 292

Query: 255 LAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDG 312
             + + M   G+  ++VTY +LI G C   RM+EA +LF  +   G  PN  +Y  LI G
Sbjct: 293 FRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHG 352

Query: 313 YCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPD 372
           + +A +++ AL L   +  +G+ P ++ Y + +  LC   +I  A  ++NEM E  I  +
Sbjct: 353 FVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKAN 412

Query: 373 NVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLF 432
            +   TL++AY K G+    + +   M E    +   T+  LI G CK K +  A +  F
Sbjct: 413 TLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDY-F 471

Query: 433 GML--DAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCK 490
           G +  D G  P+   Y+ ++DG C +N  +A   L ++    GL  D + Y +L+    K
Sbjct: 472 GRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMDGNLK 531

Query: 491 KEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
           +  +  A  L + M   G+  D + YTSL + + +  + +     L++M    ++
Sbjct: 532 QGNMLEALALRDKMAEIGMKLDLLAYTSLVWGFSQCNQLQKARSFLEEMIGEEIL 586



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 75/278 (26%), Positives = 137/278 (49%), Gaps = 7/278 (2%)

Query: 169 TVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEF 228
           T L++ L          K++ KMV  GV+ N+  YN LIH   K+ ++D+  +LL E++ 
Sbjct: 312 TALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKG 371

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
           + ++ DL  Y T I   C       A  V + M+  GI  + + Y +L+  + + G   E
Sbjct: 372 RGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTE 431

Query: 289 ARRLFRDIKGATPNH----VTYTTLIDGYCRANDLEEALRLREVMAAK-GVYPGVVTYNS 343
              L  +++    +H    VT+  LIDG C+   + +A+     M+   G+ P    Y +
Sbjct: 432 GLHLLEEMQEL--DHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTA 489

Query: 344 ILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAG 403
           ++  LCKE +++ A  L  +M ++ + PD     +L++   K G+   A+ ++++M E G
Sbjct: 490 MIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQGNMLEALALRDKMAEIG 549

Query: 404 LMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
           + LD   Y +L+ GF +  ++  A+  L  M+     P
Sbjct: 550 MKLDLLAYTSLVWGFSQCNQLQKARSFLEEMIGEEILP 587



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 91/348 (26%), Positives = 160/348 (45%), Gaps = 5/348 (1%)

Query: 134 SWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAK-DRLTDMVWKVYKKMV 192
           S LV  +    M Q  ++ +  MR    +P+    T L+++  K   L+D  +++  +M+
Sbjct: 242 STLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSD-AFRLANEML 300

Query: 193 QLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHY 252
           ++GV  N+  Y  LI   C +  + + EKL  +M    V  +L +YN LI  + K     
Sbjct: 301 EVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMD 360

Query: 253 EALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLI 310
            AL + + ++  GI PD++ Y + I G C   ++  A+ +  +++  G   N + YTTL+
Sbjct: 361 RALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLM 420

Query: 311 DGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM-NEKKI 369
           D Y ++ +  E L L E M        VVT+  ++  LCK   +  A      M N+  +
Sbjct: 421 DAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGL 480

Query: 370 APDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKE 429
            P+      +I+  CK     +A  +  +M + GL+ D+  Y +L+ G  K   M  A  
Sbjct: 481 QPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQGNMLEALA 540

Query: 430 LLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVD 477
           L   M + G      +Y+ LV G+   N  +     L+E +   +  D
Sbjct: 541 LRDKMAEIGMKLDLLAYTSLVWGFSQCNQLQKARSFLEEMIGEEILPD 588



 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 84/355 (23%), Positives = 162/355 (45%), Gaps = 20/355 (5%)

Query: 54  CHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTP 113
           C I +LS AF    E      + ++ ++  +I  L   +  K A+ +  K+     +   
Sbjct: 284 CKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNL 343

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           +  NAL  IH                +   K     L++ ++++   + P L      + 
Sbjct: 344 ASYNAL--IHG---------------FVKAKNMDRALELLNELKGRGIQPDLLLYGTFIW 386

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
            L      +    V  +M + G+ AN  +Y  L+ A  KS +  +   LL EM+  D   
Sbjct: 387 GLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEV 446

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMERE-GISPDIVTYNSLIHGFCREGRMREARRL 292
            + T+  LI   CK  +  +A+    RM  + G+ P+   Y ++I G C+E +++ A  L
Sbjct: 447 TVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTL 506

Query: 293 FRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
           F  +  +G  P+   YT+L+DG  +  ++ EAL LR+ MA  G+   ++ Y S++    +
Sbjct: 507 FEQMAQEGLVPDRTAYTSLMDGNLKQGNMLEALALRDKMAEIGMKLDLLAYTSLVWGFSQ 566

Query: 351 EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLM 405
             +++ A   L EM  ++I PD V C  ++  + ++G    A+ +++ +++  L+
Sbjct: 567 CNQLQKARSFLEEMIGEEILPDEVLCIGVLKKHYELGCIDEAVGLQSYLMKHQLL 621


>gi|356558657|ref|XP_003547620.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like [Glycine max]
          Length = 1078

 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 142/520 (27%), Positives = 237/520 (45%), Gaps = 41/520 (7%)

Query: 59  LSCAFFKWAESAVPNYKHSLQSHW--TMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVL 116
           L+  F  W     PN + +  +H   T  HIL + + +  A+  L+ + L+  +   SV 
Sbjct: 34  LALKFLNWVIKQ-PNLELNHVTHIICTTTHILVRARMYNFAKTTLKHL-LQLPIGLNSVF 91

Query: 117 NALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLA 176
            AL++ +   + N  V   L+      +M  D +Q F  M    L P ++ C ++L SL 
Sbjct: 92  GALMETYPICNSNPAVFDLLIRVCLRNRMVGDAVQTFYLMGFRGLNPSVYTCNMVLGSLV 151

Query: 177 KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLF 236
           K++  DM W  +K M+  G+  ++  +N+L++A C+         LL +ME   V     
Sbjct: 152 KEQKVDMFWSFFKGMLAKGICPDVATFNILLNALCERGKFKNAGFLLRKMEESGVYPTAV 211

Query: 237 TYNTLIALYCKKGMHYEALAVQD-----------------------------------RM 261
           TYNTL+  YCKKG +  A  + D                                   RM
Sbjct: 212 TYNTLLNWYCKKGRYKAASQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRM 271

Query: 262 EREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDL 319
            R  + P+ +TYN+LI GF REG++  A ++F ++      PN +TY TLI G+C   ++
Sbjct: 272 RRNMVYPNEITYNTLISGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNI 331

Query: 320 EEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTL 379
            EALRL +VM + G+ P  VTY ++L  L K       + +L  M    +   +++   +
Sbjct: 332 GEALRLMDVMVSHGLRPNEVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAM 391

Query: 380 INAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGF 439
           I+  CK G    A+++ + ML+  +  D  T+  LI+GF +  +++ AKE++  M   G 
Sbjct: 392 IDGLCKNGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGL 451

Query: 440 SPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQR 499
            P+   YS L+  YC     +  L         G   D      L+  FC+  K++ A+ 
Sbjct: 452 VPNGILYSTLIYNYCKMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEY 511

Query: 500 LFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
             N M   G+  +SV +  +   Y  +G+      + D M
Sbjct: 512 FMNHMSRMGLDPNSVTFDCIINGYGNSGDALKAFSVFDKM 551



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 120/456 (26%), Positives = 196/456 (42%), Gaps = 38/456 (8%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           +VFD+M + NL+P+      L+             ++   MV  G+  N   Y  L++  
Sbjct: 301 KVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRLMDVMVSHGLRPNEVTYGALLNGL 360

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
            K+++   V  +L  M    VR    +Y  +I   CK GM  EA+ + D M +  ++PD+
Sbjct: 361 YKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGLCKNGMLEEAVQLLDDMLKVSVNPDV 420

Query: 271 VTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
           VT++ LI+GF R G++  A+ +   +   G  PN + Y+TLI  YC+   L+EAL    V
Sbjct: 421 VTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGILYSTLIYNYCKMGYLKEALNAYAV 480

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M   G      T N ++   C+ G++ +A   +N M+   + P++VT + +IN Y   GD
Sbjct: 481 MNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHMSRMGLDPNSVTFDCIINGYGNSGD 540

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFC----------------------------- 419
              A  V ++M   G     FTY  L+ G C                             
Sbjct: 541 ALKAFSVFDKMNSFGHFPSLFTYGGLLKGLCIGGHINEALKFFHRLRCIPNAVDNVIFNT 600

Query: 420 ------KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
                 ++  +  A  L+  M+   F P   +Y+ L+ G C K    A L L  + + +G
Sbjct: 601 KLTSTCRSGNLSDAIALINEMVTNDFLPDNFTYTNLIAGLCKKGKIVAALLLSGKAIEKG 660

Query: 474 L-CVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKAC 532
           L   + +VY +L+    K      A  +F  M    +  D+V +  +   Y R G+    
Sbjct: 661 LLSPNPAVYTSLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKTSKV 720

Query: 533 SDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLF 568
           +DIL  M  + L   L  Y      YAK + +   F
Sbjct: 721 NDILSTMKSKNLCFNLATYNILLHGYAKRHAMARCF 756



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 119/502 (23%), Positives = 228/502 (45%), Gaps = 21/502 (4%)

Query: 84  MIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANL 143
           +++ L +   FK+A  +L K+       T    N L             L+W    Y   
Sbjct: 181 LLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTL-------------LNW----YCKK 223

Query: 144 KMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLY 203
              +   Q+ D M    +   +    V +++L +D  +   + + K+M +  V  N   Y
Sbjct: 224 GRYKAASQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVYPNEITY 283

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER 263
           N LI    +   ++   K+  EM   ++  +  TYNTLIA +C  G   EAL + D M  
Sbjct: 284 NTLISGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRLMDVMVS 343

Query: 264 EGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEE 321
            G+ P+ VTY +L++G  +         +   ++  G   +H++YT +IDG C+   LEE
Sbjct: 344 HGLRPNEVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGLCKNGMLEE 403

Query: 322 ALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
           A++L + M    V P VVT++ ++    + G+I +A  ++ +M +  + P+ +  +TLI 
Sbjct: 404 AVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGILYSTLIY 463

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
            YCK+G    A+     M  +G + D FT   L+  FC+  +++ A+  +  M   G  P
Sbjct: 464 NYCKMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHMSRMGLDP 523

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
           +  ++  +++GY N  +      + D+  S G    +  Y  L++  C    ++ A + F
Sbjct: 524 NSVTFDCIINGYGNSGDALKAFSVFDKMNSFGHFPSLFTYGGLLKGLCIGGHINEALKFF 583

Query: 502 NLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKD 561
           + ++      D+VI+ +   +  R+G       ++++M     +     Y +  A   K 
Sbjct: 584 HRLRCIPNAVDNVIFNTKLTSTCRSGNLSDAIALINEMVTNDFLPDNFTYTNLIAGLCKK 643

Query: 562 NEILD--LFWSHVVDRGLMSKH 581
            +I+   L     +++GL+S +
Sbjct: 644 GKIVAALLLSGKAIEKGLLSPN 665



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 96/348 (27%), Positives = 170/348 (48%), Gaps = 9/348 (2%)

Query: 152  VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
            +   M+  NL  +L    +LL+  AK       + +YK M++ G + +   ++ LI   C
Sbjct: 723  ILSTMKSKNLCFNLATYNILLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWHSLILGYC 782

Query: 212  KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
            +S   D   K+L  +  +    D FT+N LI  +C++    +A  +  +M +  + P++ 
Sbjct: 783  QSKSFDVAIKILRWITLEGHVIDRFTFNMLITKFCERNEMKKAFELVKQMNQFMVIPNVD 842

Query: 272  TYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
            TYN+L +G  R     +A R+ + +   G+ P +  Y TLI+G CR  +++ A++L++ M
Sbjct: 843  TYNALFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQYITLINGMCRVGNIKGAMKLQDEM 902

Query: 330  AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
               G+    V  ++I+R L    +I +A  +L+ M E +I P   T  TL++ YCK  + 
Sbjct: 903  KTLGISSHNVAMSAIVRGLANSKKIENAIWVLDLMLEMQIIPTVATFTTLMHVYCKEANV 962

Query: 390  ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
            A A+++++ M    + LD   Y  LI G C   +++ A +L   M      P+   Y  L
Sbjct: 963  AKALELRSIMEHCHVKLDVVAYNVLISGLCANGDIEAAFKLYEEMKQRDLWPNTSIYIVL 1022

Query: 450  VDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYA 497
            +D +C  N +    KLL +   R L         L ++FC   + D A
Sbjct: 1023 IDSFCAGNYQIESEKLLRDIQDREL-------MRLNQQFCYSSRCDIA 1063



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 105/435 (24%), Positives = 192/435 (44%), Gaps = 9/435 (2%)

Query: 137  VIFYANLKMT------QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKK 190
            VIF   L  T       D + + ++M  ++ +P     T L+  L K         +  K
Sbjct: 596  VIFNTKLTSTCRSGNLSDAIALINEMVTNDFLPDNFTYTNLIAGLCKKGKIVAALLLSGK 655

Query: 191  MVQLGVVA-NIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKG 249
             ++ G+++ N  +Y  L+    K         +  EM  KDV  D   +N +I  Y +KG
Sbjct: 656  AIEKGLLSPNPAVYTSLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKG 715

Query: 250  MHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYT 307
               +   +   M+ + +  ++ TYN L+HG+ +   M     L++D+   G  P+  ++ 
Sbjct: 716  KTSKVNDILSTMKSKNLCFNLATYNILLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWH 775

Query: 308  TLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEK 367
            +LI GYC++   + A+++   +  +G      T+N ++ K C+   ++ A  L+ +MN+ 
Sbjct: 776  SLILGYCQSKSFDVAIKILRWITLEGHVIDRFTFNMLITKFCERNEMKKAFELVKQMNQF 835

Query: 368  KIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIA 427
             + P+  T N L N   +  D   A +V   +LE+G +     Y  LI+G C+   +  A
Sbjct: 836  MVIPNVDTYNALFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQYITLINGMCRVGNIKGA 895

Query: 428  KELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRR 487
             +L   M   G S    + S +V G  N    E  + +LD  +   +   V+ +  L+  
Sbjct: 896  MKLQDEMKTLGISSHNVAMSAIVRGLANSKKIENAIWVLDLMLEMQIIPTVATFTTLMHV 955

Query: 488  FCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMIT 547
            +CK+  V  A  L ++M+   +  D V Y  L       G+ +A   + ++M +R L   
Sbjct: 956  YCKEANVAKALELRSIMEHCHVKLDVVAYNVLISGLCANGDIEAAFKLYEEMKQRDLWPN 1015

Query: 548  LKIYRSFSASYAKDN 562
              IY     S+   N
Sbjct: 1016 TSIYIVLIDSFCAGN 1030



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 88/358 (24%), Positives = 162/358 (45%), Gaps = 3/358 (0%)

Query: 185 WKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIAL 244
           + V+ KM   G   ++  Y  L+   C    +++  K    +       D   +NT +  
Sbjct: 545 FSVFDKMNSFGHFPSLFTYGGLLKGLCIGGHINEALKFFHRLRCIPNAVDNVIFNTKLTS 604

Query: 245 YCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGA-TP 301
            C+ G   +A+A+ + M      PD  TY +LI G C++G++  A  L      KG  +P
Sbjct: 605 TCRSGNLSDAIALINEMVTNDFLPDNFTYTNLIAGLCKKGKIVAALLLSGKAIEKGLLSP 664

Query: 302 NHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLL 361
           N   YT+L+DG  +      AL + E M  K V P  V +N I+ +  ++G+    N +L
Sbjct: 665 NPAVYTSLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKTSKVNDIL 724

Query: 362 NEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKA 421
           + M  K +  +  T N L++ Y K    A    +   M+  G + D+F++ +LI G+C++
Sbjct: 725 STMKSKNLCFNLATYNILLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWHSLILGYCQS 784

Query: 422 KEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVY 481
           K  D+A ++L  +   G      +++ L+  +C +N  +   +L+ +     +  +V  Y
Sbjct: 785 KSFDVAIKILRWITLEGHVIDRFTFNMLITKFCERNEMKKAFELVKQMNQFMVIPNVDTY 844

Query: 482 RALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
            AL     +      A R+  ++  +G +  +  Y +L     R G  K    + D+M
Sbjct: 845 NALFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQYITLINGMCRVGNIKGAMKLQDEM 902


>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 559

 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 131/450 (29%), Positives = 215/450 (47%), Gaps = 37/450 (8%)

Query: 132 VLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKM 191
           +LS L+  ++ L        V  ++      P++   T L+  L          + + K+
Sbjct: 109 ILSILINCFSQLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKV 168

Query: 192 VQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMH 251
           V LG   N   Y  LI+  CK        +LL  ++ K V+ ++  YNT+I   CK  + 
Sbjct: 169 VALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLV 228

Query: 252 YEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTL 309
            EA  +   M  +GISPD+VTYN+LI GFC  G+M++A  LF  +  +   PN  T+  L
Sbjct: 229 NEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNIL 288

Query: 310 IDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRK---------------------- 347
           +DG+C+   L+EA  +  +M  +G+ P V TYNS++ +                      
Sbjct: 289 VDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGV 348

Query: 348 -------------LCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMK 394
                         CK  ++ +A  L  EM+   I PD VT N+LI+  CK+G  + A+K
Sbjct: 349 NPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALK 408

Query: 395 VKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYC 454
           + + M + G+  D+ TY +++   CK  ++D A  LL  M D G  P  C+Y+ LVDG C
Sbjct: 409 LVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLC 468

Query: 455 NKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSV 514
                E    + ++ + +G  +DV++Y A+I+ FC     D +  L + M+ NG + ++V
Sbjct: 469 KNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAV 528

Query: 515 IYTSLAYAYWRAGEPKACSDILDDMYRRRL 544
            Y  +  + +   E      +L +M  R L
Sbjct: 529 TYEIIICSLFDKDENDKAEKLLREMITRGL 558



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 114/419 (27%), Positives = 203/419 (48%), Gaps = 5/419 (1%)

Query: 155 QMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSS 214
           QM  + +   L   ++L+N  ++     + + V  K++++G   N+     LI   C   
Sbjct: 97  QMEFNGITSDLVILSILINCFSQLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKG 156

Query: 215 DVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYN 274
            + +  +   ++       +  +Y TLI   CK G    AL +  R++ + + P++V YN
Sbjct: 157 QIHQALQFHDKVVALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYN 216

Query: 275 SLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAK 332
           ++I   C+   + EA  L+ ++  KG +P+ VTY  LI G+C    +++A  L   M  +
Sbjct: 217 TIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFE 276

Query: 333 GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
            + P V T+N ++   CKE R+++A  +L  M ++ I PD  T N+L++ YC + +   A
Sbjct: 277 NINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKA 336

Query: 393 MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
             + N + + G+  +  +Y  +IHGFCK K++D A  L   M      P   +Y+ L+DG
Sbjct: 337 KHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDG 396

Query: 453 YCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGD 512
            C        LKL+DE   RG+  D   Y +++   CK  +VD A  L   M+  GI  D
Sbjct: 397 LCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPD 456

Query: 513 SVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKD---NEILDLF 568
              YT+L     + G  +    + +D+  +  ++ + IY +    +      +E LDL 
Sbjct: 457 ICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLL 515



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 108/369 (29%), Positives = 186/369 (50%), Gaps = 2/369 (0%)

Query: 198 ANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAV 257
            +I  +  ++ +  KS+    V  L  +MEF  + +DL   + LI  + + G +  + +V
Sbjct: 70  PSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQNPLSFSV 129

Query: 258 QDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCR 315
             ++ + G  P+++T  +LI G C +G++ +A +    +   G   N V+Y TLI+G C+
Sbjct: 130 LAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCK 189

Query: 316 ANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVT 375
                 AL+L   +  K V P VV YN+I+  +CK   + +A  L +EM  K I+PD VT
Sbjct: 190 VGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVT 249

Query: 376 CNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGML 435
            N LI+ +C +G    A  + N+M+   +  + +T+  L+ GFCK + +  AK +L  M+
Sbjct: 250 YNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMM 309

Query: 436 DAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVD 495
             G  P   +Y+ L+D YC          + +    RG+  ++  Y  +I  FCK +KVD
Sbjct: 310 KQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVD 369

Query: 496 YAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFS 555
            A  LF  M  N I+ D V Y SL     + G+      ++D+M+ R +      Y S  
Sbjct: 370 EAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSIL 429

Query: 556 ASYAKDNEI 564
            +  K++++
Sbjct: 430 DALCKNHQV 438



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 57/233 (24%), Positives = 105/233 (45%), Gaps = 37/233 (15%)

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
           Y  +K       +F+ +    + P++H+ +++++   K +  D    ++K+M    ++ +
Sbjct: 327 YCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPD 386

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
           +  YN LI   CK   +    KL+ EM  + V  D  TYN+++   CK     +A+A+  
Sbjct: 387 VVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLT 446

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI----------------------- 296
           +M+ EGI PDI TY +L+ G C+ GR+ +AR +F D+                       
Sbjct: 447 KMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHG 506

Query: 297 --------------KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVY 335
                          G  PN VTY  +I      ++ ++A +L   M  +G++
Sbjct: 507 LFDESLDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREMITRGLF 559



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/268 (22%), Positives = 112/268 (41%)

Query: 297 KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRD 356
           K   P+   +  ++    ++N     + L   M   G+   +V  + ++    + G+   
Sbjct: 66  KNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQNPL 125

Query: 357 ANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIH 416
           +  +L ++ +    P+ +T  TLI   C  G    A++  ++++  G  L++ +Y  LI+
Sbjct: 126 SFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLIN 185

Query: 417 GFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCV 476
           G CK  +   A +LL  +      P+   Y+ ++D  C          L  E VS+G+  
Sbjct: 186 GLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISP 245

Query: 477 DVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDIL 536
           DV  Y ALI  FC   K+  A  LFN M    I  +   +  L   + +    K   ++L
Sbjct: 246 DVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVL 305

Query: 537 DDMYRRRLMITLKIYRSFSASYAKDNEI 564
             M ++ +   +  Y S    Y    E+
Sbjct: 306 AMMMKQGIKPDVFTYNSLMDRYCLVKEV 333



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/222 (19%), Positives = 92/222 (41%), Gaps = 6/222 (2%)

Query: 350 KEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQF 409
           K   +   NRLL++ N K   P       ++ +  K    ++ + +  +M   G+  D  
Sbjct: 52  KHNLVSSFNRLLHQKNPK---PSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLV 108

Query: 410 TYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEF 469
               LI+ F +  +  ++  +L  +L  G+ P+  + + L+ G C K      L+  D+ 
Sbjct: 109 ILSILINCFSQLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKV 168

Query: 470 VSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEP 529
           V+ G  ++   Y  LI   CK  +   A +L   + G  +  + V+Y ++  +  +    
Sbjct: 169 VALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLV 228

Query: 530 KACSDILDDMYRRRLMITLKIYRSFSASY---AKDNEILDLF 568
               D+  +M  + +   +  Y +  + +    K  +  DLF
Sbjct: 229 NEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLF 270


>gi|15238562|ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g59900
 gi|9757911|dbj|BAB08358.1| unnamed protein product [Arabidopsis thaliana]
 gi|332009866|gb|AED97249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 907

 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 131/417 (31%), Positives = 204/417 (48%), Gaps = 4/417 (0%)

Query: 127 DGNSHVLSWLVIFYANLKMTQ--DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMV 184
           D    V+++  + Y   K+ +   GL++ D+M      P   A + L+  L K    +  
Sbjct: 292 DLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEA 351

Query: 185 WKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIAL 244
             + K++V  GV  N+ +YN LI + CK     + E L   M    +R +  TY+ LI +
Sbjct: 352 LNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDM 411

Query: 245 YCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPN 302
           +C++G    AL+    M   G+   +  YNSLI+G C+ G +  A     ++  K   P 
Sbjct: 412 FCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPT 471

Query: 303 HVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLN 362
            VTYT+L+ GYC    + +ALRL   M  KG+ P + T+ ++L  L + G IRDA +L N
Sbjct: 472 VVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFN 531

Query: 363 EMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAK 422
           EM E  + P+ VT N +I  YC+ GD + A +    M E G++ D ++Y+ LIHG C   
Sbjct: 532 EMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTG 591

Query: 423 EMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYR 482
           +   AK  + G+       +   Y+ L+ G+C +   E  L +  E V RG+ +D+  Y 
Sbjct: 592 QASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYG 651

Query: 483 ALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
            LI    K +       L   M   G+  D VIYTS+  A  + G+ K    I D M
Sbjct: 652 VLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLM 708



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 135/555 (24%), Positives = 263/555 (47%), Gaps = 13/555 (2%)

Query: 7   LNSDTKFIKTISAIML-KGHWAKLLNPNIASS-LTSTAIHKVLLNLYNCCHIPSLSCAFF 64
           +  D +F+  +  I+  K  W   L+  + S  L +  + ++L+   +    P L   FF
Sbjct: 35  IAEDKQFVDAVKRIVRGKRSWEIALSSELVSRRLKTVHVEEILIGTID---DPKLGLRFF 91

Query: 65  KWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS-VLNALVKIH 123
            +       + HS  S   +IH L K   F  A ++L+ + LR     PS V N L   +
Sbjct: 92  NFL-GLHRGFDHSTASFCILIHALVKANLFWPASSLLQTLLLR--ALKPSDVFNVLFSCY 148

Query: 124 DDPD-GNSHVLSWLVIFYANLKMTQDGLQVFDQMRVH-NLMPHLHACTVLLNSLAKDRLT 181
           +     +S     L+  Y   +   DG+ VF  M    +L+P +   + LL+ L K R  
Sbjct: 149 EKCKLSSSSSFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHF 208

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
            +  +++  MV +G+  ++++Y  +I + C+  D+ + ++++  ME      ++  YN L
Sbjct: 209 GLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVL 268

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGA-- 299
           I   CKK   +EA+ ++  +  + + PD+VTY +L++G C+         +  ++     
Sbjct: 269 IDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRF 328

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
           +P+    ++L++G  +   +EEAL L + +   GV P +  YN+++  LCK  +  +A  
Sbjct: 329 SPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAEL 388

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
           L + M +  + P++VT + LI+ +C+ G   +A+     M++ GL L  + Y +LI+G C
Sbjct: 389 LFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHC 448

Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
           K  ++  A+  +  M++    P+  +Y+ L+ GYC+K      L+L  E   +G+   + 
Sbjct: 449 KFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIY 508

Query: 480 VYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
            +  L+    +   +  A +LFN M    +  + V Y  +   Y   G+     + L +M
Sbjct: 509 TFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEM 568

Query: 540 YRRRLMITLKIYRSF 554
             + ++     YR  
Sbjct: 569 TEKGIVPDTYSYRPL 583



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 138/615 (22%), Positives = 248/615 (40%), Gaps = 124/615 (20%)

Query: 50  LYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDF 109
           +Y  C +           E     +  S  +  +++  L K    + A N+++++   DF
Sbjct: 304 VYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVV--DF 361

Query: 110 LSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACT 169
             +P               N  V + L+      +   +   +FD+M    L P+    +
Sbjct: 362 GVSP---------------NLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYS 406

Query: 170 VLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFK 229
           +L++   +    D       +MV  G+  +++ YN LI+  CK  D+   E  + EM  K
Sbjct: 407 ILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINK 466

Query: 230 DVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA 289
            +   + TY +L+  YC KG   +AL +   M  +GI+P I T+ +L+ G  R G +R+A
Sbjct: 467 KLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDA 526

Query: 290 RRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGV--------- 338
            +LF ++      PN VTY  +I+GYC   D+ +A    + M  KG+ P           
Sbjct: 527 VKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHG 586

Query: 339 --------------------------VTYNSILRKLCKEGRIRDA--------------- 357
                                     + Y  +L   C+EG++ +A               
Sbjct: 587 LCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLD 646

Query: 358 ---------------NR-----LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKN 397
                          +R     LL EM+++ + PD+V   ++I+A  K GD   A  + +
Sbjct: 647 LVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWD 706

Query: 398 RMLEAGLMLDQFTYKALIHGFCKAK----------------------------------E 423
            M+  G + ++ TY A+I+G CKA                                   E
Sbjct: 707 LMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGE 766

Query: 424 MDIAKEL-LFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYR 482
           +D+ K + L   +  G   +  +Y+ L+ G+C +   E   +L+   +  G+  D   Y 
Sbjct: 767 VDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYT 826

Query: 483 ALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRR 542
            +I   C++  V  A  L+N M   GI  D V Y +L +    AGE    +++ ++M R+
Sbjct: 827 TMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQ 886

Query: 543 RLMITLKIYRSFSAS 557
            L+   K  R+ +++
Sbjct: 887 GLIPNNKTSRTTTSN 901


>gi|15221081|ref|NP_172636.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75200496|sp|Q9SAA6.1|PPR34_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g11710, mitochondrial; Flags: Precursor
 gi|4835786|gb|AAD30252.1|AC007296_13 F25C20.14 [Arabidopsis thaliana]
 gi|22655109|gb|AAM98145.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|30725498|gb|AAP37771.1| At1g11710 [Arabidopsis thaliana]
 gi|332190652|gb|AEE28773.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 657

 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 157/565 (27%), Positives = 266/565 (47%), Gaps = 28/565 (4%)

Query: 35  ASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWA--ESAVPNYKHSLQSHWTMIHILTKNK 92
           +SSLT+  I +VL    +    P L+  F+ W    + V   ++  ++   MIH+L  ++
Sbjct: 52  SSSLTNPLISRVLREFRSS---PKLALEFYNWVLRSNTVAKSENRFEASCVMIHLLVGSR 108

Query: 93  HFKSAQNMLEKI--ALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGL 150
            F  A +++  +     + LS   VL+ L++ +     +  V   LV         Q   
Sbjct: 109 RFDDALSIMANLMSVEGEKLSPLHVLSGLIRSYQACGSSPDVFDSLVRACTQNGDAQGAY 168

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           +V +Q R       +HA    +  L      D  WKVYK+M  LG V N++ +N++I++ 
Sbjct: 169 EVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRFWKVYKEMDSLGYVENVNTFNLVIYSF 228

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKG-MHY--EALAVQDRMEREGIS 267
           CK S + +   +   M    V  ++ ++N +I   CK G M +  + L     M    +S
Sbjct: 229 CKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVS 288

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
           P+ VTYNS+I+GFC+ GR+  A R+  D+   G   N  TY  L+D Y RA   +EALRL
Sbjct: 289 PNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRL 348

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
            + M +KG+    V YNSI+  L  EG I  A  +L +MN K +  D  T   ++   C+
Sbjct: 349 CDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCR 408

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            G    A++ + ++ E  L+ D   +  L+H F + K++  A ++L  ML  G S    S
Sbjct: 409 NGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAIS 468

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           +  L+DGY  +   E  L++ D  +      ++ +Y +++    K+     A+ + N M+
Sbjct: 469 FGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAME 528

Query: 506 GNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRR-----LMITLKIYRSF---SAS 557
               + D V Y +L     + G  +   DIL  M ++       ++T  I  +      S
Sbjct: 529 ----IKDIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGS 584

Query: 558 YAKDNEILDLFWSHVVDRGLMSKHI 582
           Y K  E+L      +V+RG++   I
Sbjct: 585 YEKAKEVLKF----MVERGVVPDSI 605



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 84/326 (25%), Positives = 164/326 (50%), Gaps = 8/326 (2%)

Query: 171 LLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKD 230
           L+++  +   +D   ++  +M   G+V N  +YN +++      D++    +L +M  K+
Sbjct: 332 LVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKN 391

Query: 231 VRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREAR 290
           ++ D FT   ++   C+ G   EA+  Q ++  + +  DIV +N+L+H F R+ ++  A 
Sbjct: 392 MQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACAD 451

Query: 291 RLFRD--IKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
           ++     ++G + + +++ TLIDGY +   LE AL + + M        +V YNSI+  L
Sbjct: 452 QILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGL 511

Query: 349 CKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML--EAGLML 406
            K G    A  ++N M  K I    VT NTL+N   K G+   A  + ++M   +    +
Sbjct: 512 SKRGMAGAAEAVVNAMEIKDI----VTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSV 567

Query: 407 DQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLL 466
              T+  +I+  CK    + AKE+L  M++ G  P   +Y  L+  +    ++E +++L 
Sbjct: 568 SLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSKHRSQEKVVELH 627

Query: 467 DEFVSRGLCVDVSVYRALIRRFCKKE 492
           D  + +G+     +Y +++R    +E
Sbjct: 628 DYLILQGVTPHEHIYLSIVRPLLDRE 653



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/271 (21%), Positives = 127/271 (46%), Gaps = 4/271 (1%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           +  + V   M   N+        +++  L ++       +  +++ +  +V +I  +N L
Sbjct: 378 EGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTL 437

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           +H   +   +   +++L  M  + +  D  ++ TLI  Y K+G    AL + D M +   
Sbjct: 438 MHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNK 497

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLR 326
           + ++V YNS+++G  + G    A  +   ++    + VTY TL++   +  ++EEA  + 
Sbjct: 498 TSNLVIYNSIVNGLSKRGMAGAAEAVVNAME--IKDIVTYNTLLNESLKTGNVEEADDIL 555

Query: 327 EVMAAKGVYPGV--VTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
             M  +     V  VT+N ++  LCK G    A  +L  M E+ + PD++T  TLI ++ 
Sbjct: 556 SKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFS 615

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALI 415
           K       +++ + ++  G+   +  Y +++
Sbjct: 616 KHRSQEKVVELHDYLILQGVTPHEHIYLSIV 646


>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 618

 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 126/424 (29%), Positives = 219/424 (51%), Gaps = 6/424 (1%)

Query: 107 RDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLH 166
           R  L   SV+   +K   +P  N+   S L+  +       + + + D+M      P++ 
Sbjct: 118 RKLLFAFSVVGRALKFGFEP--NTITFSTLINGFCLEGRVSEAVALVDRMVEMKYRPNVV 175

Query: 167 ACTVLLNSLA-KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCE 225
               L+N L  K R+T+ +  +  +MV+ G  AN   Y  +++  CKS +      L  +
Sbjct: 176 TVNTLINGLCLKGRVTEALVLI-DRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRK 234

Query: 226 MEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGR 285
           ME + ++A +  Y+ +I   CK G   +AL++ + ME +GI  D+V Y+S+I G C +GR
Sbjct: 235 MEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGR 294

Query: 286 MREARRLFRDIKG--ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNS 343
             +  ++ R++ G    PN VT++ LID + +   L EA  L   M A+G+ P  +TY+S
Sbjct: 295 WDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSS 354

Query: 344 ILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAG 403
           ++   CKE R+ +AN++L+ M  K   P+ VT + LIN+YCK     + M++   +   G
Sbjct: 355 LIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKG 414

Query: 404 LMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALL 463
           L+ D  TY  L+ GFC++ ++++AKEL   M+  G  PS  +Y  L+DG C+    +  L
Sbjct: 415 LVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKAL 474

Query: 464 KLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAY 523
           ++ ++     + + + +Y  +I   C   KVD A  LF  +   G+  D + Y  +    
Sbjct: 475 EIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGL 534

Query: 524 WRAG 527
            + G
Sbjct: 535 CKKG 538



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 118/399 (29%), Positives = 200/399 (50%), Gaps = 2/399 (0%)

Query: 155 QMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSS 214
           +M ++ +  +++   +++N   + R     + V  + ++ G   N   ++ LI+  C   
Sbjct: 94  EMDLNGIEHNMYTMNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEG 153

Query: 215 DVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYN 274
            V +   L+  M     R ++ T NTLI   C KG   EAL + DRM + G   + +TY 
Sbjct: 154 RVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYG 213

Query: 275 SLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAK 332
            +++  C+ G    A  LFR +  +    + V Y+ +ID  C+  +L++AL L   M  K
Sbjct: 214 PVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMK 273

Query: 333 GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
           G+   VV Y+SI+  LC +GR  D  ++L EM  + I P+ VT + LI+ + K G    A
Sbjct: 274 GIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEA 333

Query: 393 MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
            ++ N M+  G+  D  TY +LI GFCK   +  A ++L  M+  G  P+  +YS L++ 
Sbjct: 334 KELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINS 393

Query: 453 YCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGD 512
           YC     +  ++L  E  S+GL  D   Y  L++ FC+  K++ A+ LF  M   G+   
Sbjct: 394 YCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPS 453

Query: 513 SVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIY 551
            V Y  L       GE +   +I + M + R+++ + IY
Sbjct: 454 VVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIY 492



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 105/370 (28%), Positives = 187/370 (50%), Gaps = 2/370 (0%)

Query: 146 TQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNV 205
           T   L +F +M   ++   +   +++++SL KD   D    ++ +M   G+ A++  Y+ 
Sbjct: 225 TALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSS 284

Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
           +I   C     D   K+L EM  +++  ++ T++ LI ++ K+G   EA  + + M   G
Sbjct: 285 IIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARG 344

Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEAL 323
           I+PD +TY+SLI GFC+E R+ EA ++   +  KG  PN VTY+ LI+ YC+A  ++  +
Sbjct: 345 IAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGM 404

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
           RL   +++KG+    VTYN++++  C+ G++  A  L  EM  + + P  VT   L++  
Sbjct: 405 RLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGL 464

Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY 443
           C  G+   A+++  +M ++ ++L    Y  +IHG C A ++D A  L   +   G  P  
Sbjct: 465 CDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDV 524

Query: 444 CSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNL 503
            +Y+ ++ G C K +      L  +    G       Y  LIR       V  +  L   
Sbjct: 525 LTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNILIRAHLGGSGVISSVELIEE 584

Query: 504 MQGNGILGDS 513
           M+  G   D+
Sbjct: 585 MKMRGFAADA 594



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 118/440 (26%), Positives = 200/440 (45%), Gaps = 53/440 (12%)

Query: 187 VYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYC 246
           +++ M+Q   + ++  ++ L  A  +  + D V     EM+   +  +++T N +I  +C
Sbjct: 56  LFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNMYTMNIMINCFC 115

Query: 247 KKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGAT--PNHV 304
           +K     A +V  R  + G  P+ +T+++LI+GFC EGR+ EA  L   +      PN V
Sbjct: 116 RKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEMKYRPNVV 175

Query: 305 TYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRK----------------- 347
           T  TLI+G C    + EAL L + M   G     +TY  +L +                 
Sbjct: 176 TVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKM 235

Query: 348 ------------------LCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
                             LCK+G + DA  L NEM  K I  D V  +++I   C  G  
Sbjct: 236 EERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRW 295

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
               K+   M+   ++ +  T+ ALI  F K  ++  AKEL   M+  G +P   +YS L
Sbjct: 296 DDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSL 355

Query: 450 VDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGI 509
           +DG+C +N      ++LD  VS+G   ++  Y  LI  +CK ++VD   RLF  +   G+
Sbjct: 356 IDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGL 415

Query: 510 LGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFW 569
           + D+V Y +L   + ++G+     ++  +M  R +  ++  Y               +  
Sbjct: 416 VADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTY--------------GILL 461

Query: 570 SHVVDRGLMSK--HIFKEMQ 587
             + D G + K   IF++MQ
Sbjct: 462 DGLCDNGELQKALEIFEKMQ 481



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 95/340 (27%), Positives = 170/340 (50%), Gaps = 2/340 (0%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D L +F++M +  +   + A + ++  L  D   D   K+ ++M+   ++ N+  ++ LI
Sbjct: 262 DALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALI 321

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
               K   + + ++L  EM  + +  D  TY++LI  +CK+    EA  + D M  +G  
Sbjct: 322 DVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCE 381

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
           P+IVTY+ LI+ +C+  R+    RLF +I  KG   + VTY TL+ G+C++  L  A  L
Sbjct: 382 PNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKEL 441

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
            + M ++GV P VVTY  +L  LC  G ++ A  +  +M + ++       N +I+  C 
Sbjct: 442 FQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCN 501

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
                 A  +   +   G+  D  TY  +I G CK   +  A  L   M + G +PS C+
Sbjct: 502 ASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCT 561

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
           Y+ L+  +   +   + ++L++E   RG   D S  + ++
Sbjct: 562 YNILIRAHLGGSGVISSVELIEEMKMRGFAADASTIKMVV 601



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/241 (24%), Positives = 108/241 (44%), Gaps = 38/241 (15%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           Q+ D M      P++   ++L+NS  K +  D   +++ ++   G+VA+   YN L+   
Sbjct: 370 QMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGF 429

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER------- 263
           C+S  ++  ++L  EM  + V   + TY  L+   C  G   +AL + ++M++       
Sbjct: 430 CQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGI 489

Query: 264 ----------------------------EGISPDIVTYNSLIHGFCREGRMREARRLFRD 295
                                       +G+ PD++TYN +I G C++G + EA  LFR 
Sbjct: 490 GIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRK 549

Query: 296 IK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGR 353
           +K  G  P+  TY  LI  +   + +  ++ L E M  +G      T   ++  L  +GR
Sbjct: 550 MKEDGCAPSDCTYNILIRAHLGGSGVISSVELIEEMKMRGFAADASTIKMVVVML-SDGR 608

Query: 354 I 354
           +
Sbjct: 609 L 609



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 72/321 (22%), Positives = 139/321 (43%), Gaps = 4/321 (1%)

Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEAL 323
           IS   V+Y   +     + ++ EA  LF  +      P+ + ++ L     R  + +  L
Sbjct: 30  ISEAKVSYKERLRNGIVDIKVNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVL 89

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
              + M   G+   + T N ++   C++ ++  A  ++    +    P+ +T +TLIN +
Sbjct: 90  GFCKEMDLNGIEHNMYTMNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGF 149

Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY 443
           C  G  + A+ + +RM+E     +  T   LI+G C    +  A  L+  M+  G   + 
Sbjct: 150 CLEGRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANE 209

Query: 444 CSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNL 503
            +Y  +++  C   N    L L  +   R +   V  Y  +I   CK   +D A  LFN 
Sbjct: 210 ITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNE 269

Query: 504 MQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNE 563
           M+  GI  D V Y+S+       G     + +L +M  R ++  +  + +    + K+ +
Sbjct: 270 MEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGK 329

Query: 564 ILDL--FWSHVVDRGLMSKHI 582
           +L+    ++ +V RG+    I
Sbjct: 330 LLEAKELYNEMVARGIAPDTI 350


>gi|356513957|ref|XP_003525674.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g40400-like [Glycine max]
          Length = 626

 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 141/517 (27%), Positives = 241/517 (46%), Gaps = 9/517 (1%)

Query: 33  NIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNK 92
           +I   L     H++   L  C    S    FF W ++ + N   +L ++  ++HIL  ++
Sbjct: 76  DIKGILPHMGPHEISRILLRCQSDHSSVLTFFNWVKNDL-NITPTLHNYCVIVHILAWSR 134

Query: 93  HFKSAQNMLEK----IALRDFLSTPS--VLNALVKIHDDPDGNSHVLSWLVIFYANLKMT 146
            F  A N+L +    + +      P+  +   LV+  +D + N  +   L+  Y    M 
Sbjct: 135 VFSHAMNLLSELIQLVEVEGVCVPPNDGIYENLVECTEDCNWNPAIFDMLIKAYVKAGMV 194

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           + GL  F +      +P++ AC  LL+ L++       W VY++M +LG+  N + +N++
Sbjct: 195 EKGLATFRRNIEACFIPNVIACNCLLSGLSRFNYIGQCWAVYEEMGRLGIHRNAYTFNIM 254

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
            H  CK  D DKV + L +ME +    DL TYNTL+  YCKK    +A  +   M   G+
Sbjct: 255 THVLCKDGDTDKVTRFLDKMEEEGFEPDLVTYNTLVNSYCKKRRLEDAFYLYKIMYIRGV 314

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
            P+++T+  L++G C EG+++EA +LF  +  +G  P+ V+Y TL+ GYCR   ++    
Sbjct: 315 MPNLITHTVLMNGLCEEGKVKEAHQLFHQMVHRGIDPDVVSYNTLVSGYCREGKMQMCRS 374

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           L   M   G+ P  VT   I+    ++G++  A   + E+   +I       + LI A C
Sbjct: 375 LLHEMIGNGICPDSVTCRLIVEGFARDGKLLSALNTVVELKRFRIKIPEDLYDYLIVALC 434

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
             G   +A     R+ + G M    TY  L+   CK   ++ A  L   M+      +  
Sbjct: 435 IEGRPFAARSFLLRISQDGYMPKINTYNKLVESLCKFNNVEEALILKSEMVKRSMILNLV 494

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
           +Y  ++   C  N       LL+E VS G+  DV + RALI  +C++ KVD A  L    
Sbjct: 495 AYRAVISCLCRVNRTLEAEGLLEEMVSSGILPDVEISRALINGYCEENKVDKAVSLLKFF 554

Query: 505 QGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
                + D+  Y ++   +   G      ++ D + +
Sbjct: 555 ANEFQVYDTESYNAVVKVFCDVGNVAELLELQDKLLK 591



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 86/347 (24%), Positives = 147/347 (42%), Gaps = 72/347 (20%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           +  D+M      P L     L+NS  K R  +  + +YK M   GV+ N+  + VL++  
Sbjct: 269 RFLDKMEEEGFEPDLVTYNTLVNSYCKKRRLEDAFYLYKIMYIRGVMPNLITHTVLMNGL 328

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           C+   V +  +L  +M  + +  D+ +YNTL++ YC++G      ++   M   GI PD 
Sbjct: 329 CEEGKVKEAHQLFHQMVHRGIDPDVVSYNTLVSGYCREGKMQMCRSLLHEMIGNGICPDS 388

Query: 271 VTYNSLIHGFCREGRMREARRLFRDIK--------------------------------- 297
           VT   ++ GF R+G++  A     ++K                                 
Sbjct: 389 VTCRLIVEGFARDGKLLSALNTVVELKRFRIKIPEDLYDYLIVALCIEGRPFAARSFLLR 448

Query: 298 ----GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGR 353
               G  P   TY  L++  C+ N++EEAL L+  M  + +   +V Y +++  LC+  R
Sbjct: 449 ISQDGYMPKINTYNKLVESLCKFNNVEEALILKSEMVKRSMILNLVAYRAVISCLCRVNR 508

Query: 354 IRDANRLLNEMNEKKIAPDNVTCNTLINAYCK---------------------------- 385
             +A  LL EM    I PD      LIN YC+                            
Sbjct: 509 TLEAEGLLEEMVSSGILPDVEISRALINGYCEENKVDKAVSLLKFFANEFQVYDTESYNA 568

Query: 386 -------IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMD 425
                  +G+ A  +++++++L+ G + ++ T K +IHG  KA E D
Sbjct: 569 VVKVFCDVGNVAELLELQDKLLKVGYVSNRLTCKYVIHGLQKAMEQD 615



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 89/409 (21%), Positives = 178/409 (43%), Gaps = 14/409 (3%)

Query: 160 NLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKV 219
           N+ P LH   V+++ LA  R+      +  +++QL          V +   C   + D +
Sbjct: 115 NITPTLHNYCVIVHILAWSRVFSHAMNLLSELIQL----------VEVEGVCVPPN-DGI 163

Query: 220 EKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHG 279
            + L E   +D   +   ++ LI  Y K GM  + LA   R       P+++  N L+ G
Sbjct: 164 YENLVECT-EDCNWNPAIFDMLIKAYVKAGMVEKGLATFRRNIEACFIPNVIACNCLLSG 222

Query: 280 FCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPG 337
             R   + +   ++ ++   G   N  T+  +    C+  D ++  R  + M  +G  P 
Sbjct: 223 LSRFNYIGQCWAVYEEMGRLGIHRNAYTFNIMTHVLCKDGDTDKVTRFLDKMEEEGFEPD 282

Query: 338 VVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKN 397
           +VTYN+++   CK+ R+ DA  L   M  + + P+ +T   L+N  C+ G    A ++ +
Sbjct: 283 LVTYNTLVNSYCKKRRLEDAFYLYKIMYIRGVMPNLITHTVLMNGLCEEGKVKEAHQLFH 342

Query: 398 RMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKN 457
           +M+  G+  D  +Y  L+ G+C+  +M + + LL  M+  G  P   +   +V+G+    
Sbjct: 343 QMVHRGIDPDVVSYNTLVSGYCREGKMQMCRSLLHEMIGNGICPDSVTCRLIVEGFARDG 402

Query: 458 NEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYT 517
              + L  + E     + +   +Y  LI   C + +   A+     +  +G +     Y 
Sbjct: 403 KLLSALNTVVELKRFRIKIPEDLYDYLIVALCIEGRPFAARSFLLRISQDGYMPKINTYN 462

Query: 518 SLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
            L  +  +    +    +  +M +R +++ L  YR+  +   + N  L+
Sbjct: 463 KLVESLCKFNNVEEALILKSEMVKRSMILNLVAYRAVISCLCRVNRTLE 511


>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
 gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
          Length = 614

 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 132/421 (31%), Positives = 204/421 (48%), Gaps = 44/421 (10%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           + FD+MR  NL+P++  C++L++ L K + +    + ++ M   G+VA+  +Y  L+   
Sbjct: 30  RCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALRCFRAMQGSGIVADTVIYTALLSGL 89

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
            K   +D+   +L EM       ++ TYN+LI   CK      A  + + M+    SP +
Sbjct: 90  WKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSM 149

Query: 271 VTYNSLIHGFCREGRMREARRLFRDI---------KGATPNHVTYTTLIDGYCRANDLEE 321
           VTYN+L+ G  R G++  A  LF+++            +PN +TY+ LIDG C+AN + +
Sbjct: 150 VTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQ 209

Query: 322 ALRLREVMAAKGVYPGV-----------------------------------VTYNSILR 346
           A+ L E M A+G  P V                                   VTYNS+L 
Sbjct: 210 AVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLH 269

Query: 347 KLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLML 406
            LC+  R+ DA  L+ +M  +   P+ VT  TLI+  CK+G    A  +   M++ G   
Sbjct: 270 GLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTP 329

Query: 407 DQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLL 466
           D   Y  LI+G CKA ++D +  LL   +  G  P   +YS ++ G C  N  +   +LL
Sbjct: 330 DLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLL 389

Query: 467 DEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRA 526
               SRG   DV +Y  LI   CK  KVD A  L+ +M G+G   D V Y++L     +A
Sbjct: 390 LYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKA 449

Query: 527 G 527
           G
Sbjct: 450 G 450



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 124/407 (30%), Positives = 207/407 (50%), Gaps = 10/407 (2%)

Query: 123 HD-DPDGNSHVLSWLVIFYANLKMTQ--DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDR 179
           HD D   + +V+++ V+     K  +    +++ + M+     P +   T+L++ L K+ 
Sbjct: 181 HDMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKES 240

Query: 180 LTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYN 239
                W+V ++M+  G V N+  YN L+H  C++  V     L+ +M  +    ++ TY 
Sbjct: 241 KVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYG 300

Query: 240 TLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--K 297
           TLI   CK G   +A A+   M  +G +PD++ YN LI+G C+  ++ E+  L R     
Sbjct: 301 TLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSG 360

Query: 298 GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDA 357
           G  P+ VTY+++I G CR+N L+EA RL   + ++G  P V+ Y++++  LCK G++ +A
Sbjct: 361 GIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEA 420

Query: 358 NRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHG 417
             L   M       D VT +TLI+  CK G    A  +  RM+  G      TY +LI G
Sbjct: 421 FDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKG 480

Query: 418 FCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSR----- 472
            C    +D A EL+  M  +  +PS  +Y+ L+ G C     ++ + LL++  +R     
Sbjct: 481 LCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAG 540

Query: 473 GLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
           G  +D   Y +LI   CK  +V  A   F  M  NG++ D + Y+ L
Sbjct: 541 GTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSIL 587



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 126/435 (28%), Positives = 196/435 (45%), Gaps = 44/435 (10%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N  + S L+      K + D L+ F  M+   ++      T LL+ L K++  D    + 
Sbjct: 43  NVFLCSILIDGLCKAKRSIDALRCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAIL 102

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLI------ 242
            +M   G   N+  YN LI   CK+++ D+ ++L   M+  +    + TYNTL+      
Sbjct: 103 HEMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRT 162

Query: 243 -------ALY-----------------------------CKKGMHYEALAVQDRMEREGI 266
                  AL+                             CK     +A+ + + M+  G 
Sbjct: 163 GKLERAMALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGC 222

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
           SPD++TY  L+ G C+E ++  A  + R++   G  PN VTY +L+ G CRA  + +AL 
Sbjct: 223 SPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALA 282

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           L   M  +G  P VVTY +++  LCK GR++DA  +L +M +K   PD +  N LIN  C
Sbjct: 283 LMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLC 342

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           K      ++ +  R +  G+  D  TY ++I+G C++  +D A  LL  +   G  P   
Sbjct: 343 KADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVI 402

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
            YS L+DG C     +    L +     G   DV  Y  LI   CK  +VD A  L   M
Sbjct: 403 LYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARM 462

Query: 505 QGNGILGDSVIYTSL 519
              G    ++ Y SL
Sbjct: 463 VRMGTPPSTMTYNSL 477



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 125/405 (30%), Positives = 204/405 (50%), Gaps = 16/405 (3%)

Query: 150 LQVFDQM---RVHNL----MPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHL 202
           + +F +M   R H++     P++   +VL++ L K        ++ + M   G   ++  
Sbjct: 169 MALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVIT 228

Query: 203 YNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRME 262
           Y +L+   CK S V    ++L EM       +L TYN+L+   C+     +ALA+   M 
Sbjct: 229 YTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMT 288

Query: 263 REGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLE 320
             G +P++VTY +LI G C+ GR+++A  +  D+  KG TP+ + Y  LI+G C+A+ ++
Sbjct: 289 CRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVD 348

Query: 321 EALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLI 380
           E++ L     + G+ P VVTY+S++  LC+  R+ +A RLL  +  +   PD +  +TLI
Sbjct: 349 ESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLI 408

Query: 381 NAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFS 440
           +  CK G    A  +   M   G   D  TY  LI G CKA  +D A  LL  M+  G  
Sbjct: 409 DGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTP 468

Query: 441 PSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSV-YRALIRRFCKKEKVDYAQR 499
           PS  +Y+ L+ G C+ N+ +  ++L++E   R  C   +V Y  LI   C+ E+VD A  
Sbjct: 469 PSTMTYNSLIKGLCDLNHLDEAIELVEEM-ERSNCAPSAVTYNILIHGMCRMERVDSAVV 527

Query: 500 LFN-----LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
           L        +   G   D++ Y+SL     +AG      D   +M
Sbjct: 528 LLEQAKARCVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEM 572



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 114/375 (30%), Positives = 184/375 (49%), Gaps = 13/375 (3%)

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
           P ++    LL    +    D   + + +M    +V N+ L ++LI   CK+     ++ L
Sbjct: 7   PDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKR--SIDAL 64

Query: 223 LC--EMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGF 280
            C   M+   + AD   Y  L++   K+    +ALA+   M   G  P++VTYNSLI G 
Sbjct: 65  RCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGL 124

Query: 281 CREGRMREARRLFRDIKGA--TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVY--- 335
           C+      A+ LF  +K    +P+ VTY TL+DG  R   LE A+ L + M  +  +   
Sbjct: 125 CKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMD 184

Query: 336 ----PGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTAS 391
               P V+TY+ ++  LCK  R+  A  LL  M  +  +PD +T   L++  CK    A+
Sbjct: 185 DRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAA 244

Query: 392 AMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVD 451
           A +V   ML+AG + +  TY +L+HG C+A+ +  A  L+  M   G +P+  +Y  L+D
Sbjct: 245 AWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLID 304

Query: 452 GYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILG 511
           G C     +    +L + + +G   D+ +Y  LI   CK ++VD +  L       GI  
Sbjct: 305 GLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKP 364

Query: 512 DSVIYTSLAYAYWRA 526
           D V Y+S+ Y   R+
Sbjct: 365 DVVTYSSVIYGLCRS 379



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 102/342 (29%), Positives = 158/342 (46%), Gaps = 9/342 (2%)

Query: 232 RADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARR 291
           + D++TY  L+  +C+ G   +A    D M  + + P++   + LI G C+  R  +A R
Sbjct: 6   QPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALR 65

Query: 292 LFRDIKGA--TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLC 349
            FR ++G+    + V YT L+ G  +   L++AL +   M   G  P VVTYNS++  LC
Sbjct: 66  CFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLC 125

Query: 350 KEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLE--AGLMLD 407
           K      A  L   M   + +P  VT NTL++   + G    AM +   ML+  +  M D
Sbjct: 126 KNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDD 185

Query: 408 Q-----FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEAL 462
           +      TY  LI G CKA  +  A ELL  M   G SP   +Y+ LVDG C ++   A 
Sbjct: 186 RCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAA 245

Query: 463 LKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYA 522
            ++L E +  G   ++  Y +L+   C+  +V  A  L   M   G   + V Y +L   
Sbjct: 246 WEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDG 305

Query: 523 YWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
             + G  K    +L DM  +     L IY        K +++
Sbjct: 306 LCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQV 347



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 99/363 (27%), Positives = 172/363 (47%), Gaps = 28/363 (7%)

Query: 69  SAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDG 128
             VPN    L ++ +++H L + +    A  ++  +  R    TP+V+            
Sbjct: 256 GCVPN----LVTYNSLLHGLCRARRVSDALALMRDMTCRG--CTPNVVT----------- 298

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
                  L+     +   +D   +   M      P L    +L+N L K    D    + 
Sbjct: 299 ----YGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALL 354

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
           ++ V  G+  ++  Y+ +I+  C+S+ +D+  +LL  ++ +    D+  Y+TLI   CK 
Sbjct: 355 RRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKA 414

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF-RDIK-GATPNHVTY 306
           G   EA  + + M  +G   D+VTY++LI G C+ GR+ EA  L  R ++ G  P+ +TY
Sbjct: 415 GKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTY 474

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
            +LI G C  N L+EA+ L E M      P  VTYN ++  +C+  R+  A  LL +   
Sbjct: 475 NSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKA 534

Query: 367 KKIAP-----DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKA 421
           + +A      D +  ++LI+  CK G  A A+     M++ G++ D  TY  L+ G  K+
Sbjct: 535 RCVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILLEGLKKS 594

Query: 422 KEM 424
           K++
Sbjct: 595 KDL 597



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 95/320 (29%), Positives = 146/320 (45%), Gaps = 11/320 (3%)

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
           PD+ TY +L+ GFCR G + +A+R F ++  K   PN    + LIDG C+A    +ALR 
Sbjct: 7   PDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALRC 66

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
              M   G+    V Y ++L  L KE R+  A  +L+EM +    P+ VT N+LI+  CK
Sbjct: 67  FRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCK 126

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAG------- 438
             +   A ++   M          TY  L+ G  +  +++ A  L   MLD         
Sbjct: 127 NNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDR 186

Query: 439 FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQ 498
            SP+  +YS L+DG C  N     ++LL+   +RG   DV  Y  L+   CK+ KV  A 
Sbjct: 187 CSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAW 246

Query: 499 RLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASY 558
            +   M   G + + V Y SL +   RA        ++ DM  R     +  Y +     
Sbjct: 247 EVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGL 306

Query: 559 AKDNEILD--LFWSHVVDRG 576
            K   + D     + ++D+G
Sbjct: 307 CKVGRVKDACAMLADMIDKG 326


>gi|449461475|ref|XP_004148467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cucumis sativus]
          Length = 775

 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 137/466 (29%), Positives = 227/466 (48%), Gaps = 73/466 (15%)

Query: 190 KMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVR----------------- 232
           ++ + G+V N   Y+VLI  CCK+ +++K  +   EM+ K +R                 
Sbjct: 288 EISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQ 347

Query: 233 -----------------ADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNS 275
                            A++FT+NTL++  CK+G   EA  + D +  +GISP++V+YN+
Sbjct: 348 SWQNAFTMFNDALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNN 407

Query: 276 LIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEAL----RLREV- 328
           +I G CR+  +  A ++++++   G TPN VT+T L+DGY +  D+E A     R+++  
Sbjct: 408 IILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDAN 467

Query: 329 ------------------------------MAAKGVYPGVVTYNSILRKLCKEGRIRDAN 358
                                           ++G  P  + YN+I+    KEG I  A+
Sbjct: 468 ILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLAS 527

Query: 359 RLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGF 418
            +  EM E  I P  VT  +LI+ +CK  +   A+K+ N M   GL +D   Y  LI GF
Sbjct: 528 NVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGF 587

Query: 419 CKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDV 478
           CK ++M  A ELL  +  AG SP+   Y+ ++ G+ N NN E  + L  + V+ G+  D+
Sbjct: 588 CKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDL 647

Query: 479 SVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDD 538
             Y +LI    K  ++ YA  +   M   GIL D   +T L       G+ +    IL+D
Sbjct: 648 KTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILED 707

Query: 539 MYRRRLMITLKIYRSFSASYAKDNEILDLFWSH--VVDRGLMSKHI 582
           M  + ++ ++ IY +  A + K+  + + F  H  ++DRGL+  +I
Sbjct: 708 MNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNI 753



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 120/477 (25%), Positives = 228/477 (47%), Gaps = 22/477 (4%)

Query: 53  CCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLST 112
           CC   ++  AF  ++E      + S+ S  +++    K + +++A  M    AL   L+ 
Sbjct: 308 CCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFND-ALESGLAN 366

Query: 113 PSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHA-CTVL 171
               N L             LSWL       KM +    ++D++    + P++ +   ++
Sbjct: 367 VFTFNTL-------------LSWLC---KEGKMNE-ACNLWDEVIAKGISPNVVSYNNII 409

Query: 172 LNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDV 231
           L    KD + +   KVYK+M+  G   N   + +L+    K  D++    +   M+  ++
Sbjct: 410 LGHCRKDNI-NAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANI 468

Query: 232 RADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARR 291
                T   +I   CK G  +E   + ++   +G  P  + YN++I GF +EG +  A  
Sbjct: 469 LPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASN 528

Query: 292 LFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLC 349
           ++R++   G TP+ VTYT+LIDG+C+ N+++ AL+L   M  KG+   +  Y +++   C
Sbjct: 529 VYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFC 588

Query: 350 KEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQF 409
           K   ++ A+ LLNE+    ++P+    N++I  +  + +   A+ +  +M+  G+  D  
Sbjct: 589 KRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLK 648

Query: 410 TYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEF 469
           TY +LI G  K+  +  A ++   ML  G  P   +++ L++G CNK   E   K+L++ 
Sbjct: 649 TYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDM 708

Query: 470 VSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRA 526
             + +   V +Y  LI    K+  +  A RL + M   G++ D++ Y  L    ++ 
Sbjct: 709 NGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNGKFKG 765



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 117/506 (23%), Positives = 209/506 (41%), Gaps = 74/506 (14%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           Q F Q +   +     A ++ ++ L     +     + ++M   G +     +  +I AC
Sbjct: 179 QHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITAC 238

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
            K  +V +  +L  +M       +L    +L+  YC +G    AL + + +   G+ P+ 
Sbjct: 239 VKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNK 298

Query: 271 VTYNSLIHGFCREGRMREARRLFRDIK--------------------------------- 297
           VTY+ LI G C+ G + +A   + ++K                                 
Sbjct: 299 VTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFND 358

Query: 298 ---GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRI 354
                  N  T+ TL+   C+   + EA  L + + AKG+ P VV+YN+I+   C++  I
Sbjct: 359 ALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNI 418

Query: 355 RDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT---- 410
             A ++  EM +    P+ VT   L++ Y K GD  +A  + +RM +A ++    T    
Sbjct: 419 NAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGII 478

Query: 411 -------------------------------YKALIHGFCKAKEMDIAKELLFGMLDAGF 439
                                          Y  +I GF K   +++A  +   M + G 
Sbjct: 479 IKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGI 538

Query: 440 SPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQR 499
           +PS  +Y+ L+DG+C  NN +  LKLL++   +GL +D+  Y  LI  FCK+  +  A  
Sbjct: 539 TPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHE 598

Query: 500 LFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYA 559
           L N ++G G+  +  IY S+   +      +   D+   M    +   LK Y S      
Sbjct: 599 LLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLL 658

Query: 560 KDNEILDLFWSHVVDRGLMSKHIFKE 585
           K   +L   ++  +   ++SK I  +
Sbjct: 659 KSGRLL---YASDIHTEMLSKGILPD 681



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 72/302 (23%), Positives = 127/302 (42%), Gaps = 36/302 (11%)

Query: 282 REGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVV 339
           +EG + EA + F   K  G   +   Y+  +   C   +   AL L   M A G  P   
Sbjct: 170 QEGNILEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEG 229

Query: 340 TYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRM 399
           T+ S++    KEG + +A RL ++M     + +     +L+  YC  G+  SA+ + N +
Sbjct: 230 TFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEI 289

Query: 400 LEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGY------ 453
            E+GL+ ++ TY  LI G CK   ++ A E    M   G   S  S + +++GY      
Sbjct: 290 SESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSW 349

Query: 454 ----------------------------CNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
                                       C +        L DE +++G+  +V  Y  +I
Sbjct: 350 QNAFTMFNDALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNII 409

Query: 486 RRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
              C+K+ ++ A +++  M  NG   ++V +T L   Y++ G+ +    I   M    ++
Sbjct: 410 LGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANIL 469

Query: 546 IT 547
            T
Sbjct: 470 PT 471


>gi|224111844|ref|XP_002316000.1| predicted protein [Populus trichocarpa]
 gi|222865040|gb|EEF02171.1| predicted protein [Populus trichocarpa]
          Length = 745

 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 119/400 (29%), Positives = 212/400 (53%), Gaps = 2/400 (0%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           + LQ+  +M  +NL P L   ++L++ L K        ++YK+M    +  N   ++ ++
Sbjct: 344 EALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGIL 403

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
              C+   +         +   ++R D+  YN +I  Y K G   EA+ +  R+  + I+
Sbjct: 404 KGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAIT 463

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRL 325
           P IVT+NSLI+GFC+  ++ EARRL   IK  G  P+ VTYTTL++ YC   ++ +   L
Sbjct: 464 PSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHEL 523

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
              M  K + P VVTY  +++ LCK+ ++ ++ +LL +M  K +APD +T NT+I  +CK
Sbjct: 524 LLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCK 583

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
             D   A ++ + ML   L     TY  LI G C+  +++ A  +L  + D   + +  +
Sbjct: 584 AKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVA 643

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+ ++  +C K + +  +K+  + V +G  V +  Y A+I R CK+  ++ A+  F +M 
Sbjct: 644 YTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRLCKRCLINEAKYYFCIML 703

Query: 506 GNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
            +G+  D  I+  +  A+ RAG   +  ++L  M +  L+
Sbjct: 704 SDGVSPDQEIFEMMLNAFHRAGHVHSVFELLAVMIKFGLL 743



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 128/517 (24%), Positives = 230/517 (44%), Gaps = 73/517 (14%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHV 132
            ++HS  S + + H+L + + FK  + +L+++   +  S                     
Sbjct: 58  GFQHSRVSRFLVSHVLARKRRFKDLRLVLDQMLQEEVAS--------------------- 96

Query: 133 LSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMV 192
                      +M  D L V  +M+  NL P +     LL +L   R TD++W VY  + 
Sbjct: 97  -----------RMVHDALFVLVKMKEQNLRPSIQTYNSLLYNL---RHTDIMWDVYNDIK 142

Query: 193 QLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMH- 251
             G   +    ++++   C  S        L + + K+    + ++NT+++ YCK G+  
Sbjct: 143 DSGTPQSARTSSIIVDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLAD 202

Query: 252 ----------------------------------YEALAVQDRMEREGISPDIVTYNSLI 277
                                              EAL + + ME++G+ PD+VTY  + 
Sbjct: 203 VAKSFFCMMLKYGILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVA 262

Query: 278 HGFCREGRMREARRLFRDI---KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGV 334
            GF   G M  AR + + +   +G  P+ VTYT LI G+C+  ++EEALRLR  + + G 
Sbjct: 263 KGFHLLGLMSGAREIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGF 322

Query: 335 YPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMK 394
              V+ Y+ +L  LCK G++ +A +LL EM    + PD VT + LI+  CK G    A++
Sbjct: 323 QLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQ 382

Query: 395 VKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYC 454
           +   M    +  + F +  ++ G C+   +  A+     ++ +   P    Y+ ++DGY 
Sbjct: 383 LYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYV 442

Query: 455 NKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSV 514
              + E  ++L      + +   +  + +LI  FCK  KV  A+RL   ++ +G+   +V
Sbjct: 443 KLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAV 502

Query: 515 IYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIY 551
            YT+L  AY   G      ++L +M  + +  T+  Y
Sbjct: 503 TYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTY 539



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 115/432 (26%), Positives = 208/432 (48%), Gaps = 48/432 (11%)

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
           P + +   +++   K  L D+    +  M++ G++ + + YN+LIH    +  +++  +L
Sbjct: 183 PSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYGILPDTYSYNILIHGLIVAGSMEEALEL 242

Query: 223 LCEMEFKDVRADLFTYNTLIALYCKKGMHYEALA------VQDRMEREGISPDIVTYNSL 276
             +ME + ++ D+ TY  +      KG H   L       +Q  +  EG+ PD+VTY  L
Sbjct: 243 TNDMEKQGLQPDMVTYKIV-----AKGFHLLGLMSGAREIIQKMLTDEGLKPDLVTYTVL 297

Query: 277 IHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGV 334
           I G C+ G + EA RL RD+   G   N + Y+ L+   C+   ++EAL+L   M A  +
Sbjct: 298 ICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNL 357

Query: 335 YPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI------------------------- 369
            P +VTY+ ++  LCK+G+++ A +L  EM   +I                         
Sbjct: 358 QPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARM 417

Query: 370 ----------APDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
                      PD    N +I+ Y K+GD   A+++  R+ +  +     T+ +LI+GFC
Sbjct: 418 YFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFC 477

Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
           K +++  A+ LL  +   G  PS  +Y+ L++ YC + N   L +LL E   + +   V 
Sbjct: 478 KNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVV 537

Query: 480 VYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
            Y  +I+  CK+ K++ + +L   M+  G+  D + Y ++   + +A + +   ++LDDM
Sbjct: 538 TYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDM 597

Query: 540 YRRRLMITLKIY 551
               L  T   Y
Sbjct: 598 LIHNLEPTPATY 609



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 109/397 (27%), Positives = 196/397 (49%), Gaps = 2/397 (0%)

Query: 159 HNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDK 218
             L P L   TVL+    +    +   ++ + ++  G   N+ LY+VL+ + CK   VD+
Sbjct: 285 EGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDE 344

Query: 219 VEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIH 278
             +LL EME  +++ DL TY+ LI   CK+G   +A+ +   M    I P+   ++ ++ 
Sbjct: 345 ALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILK 404

Query: 279 GFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYP 336
           G C +G + +AR  F  +      P+   Y  +IDGY +  D+EEA+RL + +  K + P
Sbjct: 405 GLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITP 464

Query: 337 GVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVK 396
            +VT+NS++   CK  ++ +A RLL  +    + P  VT  TL+NAYC+ G+     ++ 
Sbjct: 465 SIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELL 524

Query: 397 NRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNK 456
             M    +     TY  +I G CK ++++ + +LL  M   G +P   +Y+ ++  +C  
Sbjct: 525 LEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKA 584

Query: 457 NNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIY 516
            +     +LLD+ +   L    + Y  LI   C+   V+ A R+   +Q   I    V Y
Sbjct: 585 KDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAY 644

Query: 517 TSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRS 553
           T++  A+   G+ +    +   M  +   +++K Y +
Sbjct: 645 TTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSA 681



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 93/335 (27%), Positives = 169/335 (50%), Gaps = 2/335 (0%)

Query: 145 MTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYN 204
           M  D    FD + + NL P +    ++++   K    +   ++YK++    +  +I  +N
Sbjct: 411 MLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFN 470

Query: 205 VLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMERE 264
            LI+  CK+  V +  +LL  ++   +     TY TL+  YC++G   +   +   M  +
Sbjct: 471 SLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLK 530

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEA 322
            I P +VTY  +I G C++ ++ E+ +L  D+  KG  P+ +TY T+I  +C+A D+ +A
Sbjct: 531 DIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKA 590

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
             L + M    + P   TYN ++  LC+ G + DA+R+L  + ++ I    V   T+I A
Sbjct: 591 FELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKA 650

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +C  GD   A+KV ++M+E G  +    Y A+I+  CK   ++ AK     ML  G SP 
Sbjct: 651 HCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRLCKRCLINEAKYYFCIMLSDGVSPD 710

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVD 477
              +  +++ +    +  ++ +LL   +  GL  D
Sbjct: 711 QEIFEMMLNAFHRAGHVHSVFELLAVMIKFGLLHD 745



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 99/410 (24%), Positives = 195/410 (47%), Gaps = 3/410 (0%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMV-QLGVVANIHLYNV 205
           ++ L++ + M    L P +    ++        L     ++ +KM+   G+  ++  Y V
Sbjct: 237 EEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREIIQKMLTDEGLKPDLVTYTV 296

Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
           LI   C+  ++++  +L  ++     + ++  Y+ L++  CK+G   EAL +   ME   
Sbjct: 297 LICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANN 356

Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEAL 323
           + PD+VTY+ LIHG C++G++++A +L++++      PN   ++ ++ G C    L +A 
Sbjct: 357 LQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDAR 416

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
              + +    + P V  YN ++    K G + +A RL   + +K I P  VT N+LI  +
Sbjct: 417 MYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGF 476

Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY 443
           CK      A ++   +   GL     TY  L++ +C+   ++   ELL  M      P+ 
Sbjct: 477 CKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTV 536

Query: 444 CSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNL 503
            +Y+ ++ G C +   E  ++LL++  ++GL  D   Y  +I+ FCK + +  A  L + 
Sbjct: 537 VTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDD 596

Query: 504 MQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRS 553
           M  + +      Y  L     R G+ +    +L  +  R + +T   Y +
Sbjct: 597 MLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTT 646


>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
 gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
          Length = 528

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 123/464 (26%), Positives = 226/464 (48%), Gaps = 20/464 (4%)

Query: 80  SHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIF 139
           ++  ++H L+K +  + A  +L++               +V     PD  +  L+ +V  
Sbjct: 41  TYTKLVHGLSKARRLRDAVQVLQE---------------MVSARHVPDNTT--LTVVVQS 83

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
                   D  ++ ++M    +  +    + L++ L K    D    + + M + G    
Sbjct: 84  LCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALVETMAERGCAPT 143

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
           +  YN +I   C++  VD+    + +M  +    D+ TY  LI  +CK       L +  
Sbjct: 144 VVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLG 203

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDL 319
            + R G +PDIVTY+++I G C+ GR+R+A  +F ++  A P  +TY +LI GYCRA D+
Sbjct: 204 EVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSCA-PTAITYNSLIGGYCRAGDM 262

Query: 320 EEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTL 379
           +EA+RL   M      P VVTY +++   CK GR+ DA  L  +M   K++PD VT  +L
Sbjct: 263 DEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSL 322

Query: 380 INAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGF 439
           ++  C  G    A+++   +   G     +TY  ++ G+CKA ++  A+EL+      GF
Sbjct: 323 VDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGF 382

Query: 440 SPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG--LCVDVSVYRALIRRFCKKEKVDYA 497
            P+  +Y+ LV G C     +  L+ LD+  S G      V++Y  ++   C+  + D A
Sbjct: 383 VPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDA 442

Query: 498 QRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
            + +  M   G +  +  + ++ +A  +A +P+   ++L++M +
Sbjct: 443 VQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIK 486



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 133/434 (30%), Positives = 213/434 (49%), Gaps = 12/434 (2%)

Query: 150 LQVFDQMR-VHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIH 208
           L V+ QM   H   P     T L++ L+K R      +V ++MV    V +     V++ 
Sbjct: 25  LGVYRQMNDAHP--PDFLTYTKLVHGLSKARRLRDAVQVLQEMVSARHVPDNTTLTVVVQ 82

Query: 209 ACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISP 268
           + C    VD   +L+ EM  + + A+  TY+ L+   CK     EA+A+ + M   G +P
Sbjct: 83  SLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALVETMAERGCAP 142

Query: 269 DIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLR 326
            +VTYNS+I GFCR  R+ EA      +  +G  P+ +TYT LI G+C++ D+   L L 
Sbjct: 143 TVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELL 202

Query: 327 EVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKI 386
             +  +G  P +VTY++++  LCK GR+RDA  +  EM+    AP  +T N+LI  YC+ 
Sbjct: 203 GEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMS---CAPTAITYNSLIGGYCRA 259

Query: 387 GDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSY 446
           GD   A+++  +M++     D  TY  L+  FCK   +D A EL   M+    SP   ++
Sbjct: 260 GDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTF 319

Query: 447 SWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQG 506
           + LVDG C +   E  L+LL+E   RG    +  Y  ++  +CK  +V  A+ L    + 
Sbjct: 320 TSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRS 379

Query: 507 NGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRR--RLMITLKIYRSFSASYAKDNEI 564
            G + ++V Y  L     RAG        LD +         ++ +Y     +  +D   
Sbjct: 380 RGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRT 439

Query: 565 LDL--FWSHVVDRG 576
            D   F+  ++ RG
Sbjct: 440 DDAVQFYEEMIQRG 453



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 171/365 (46%), Gaps = 6/365 (1%)

Query: 202 LYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRM 261
           L+NV+I   C++  +     +  +M       D  TY  L+    K     +A+ V   M
Sbjct: 7   LHNVVIGGLCRAGRLRHALGVYRQMNDAH-PPDFLTYTKLVHGLSKARRLRDAVQVLQEM 65

Query: 262 EREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDL 319
                 PD  T   ++   C   R+ +AR L  ++  +G   N +TY+ L+DG C+   L
Sbjct: 66  VSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERL 125

Query: 320 EEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTL 379
           +EA+ L E MA +G  P VVTYNSI+   C+  R+ +A+  + +M  +   PD +T   L
Sbjct: 126 DEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTAL 185

Query: 380 INAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGF 439
           I  +CK  D    +++   +   G   D  TY  +I G CKA  +  A ++   M     
Sbjct: 186 IGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM---SC 242

Query: 440 SPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQR 499
           +P+  +Y+ L+ GYC   + +  ++LL + V      DV  Y  L+  FCK  ++D A  
Sbjct: 243 APTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYE 302

Query: 500 LFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYA 559
           LF  M  N +  D V +TSL       G  +   ++L+++ RR    T+  Y      Y 
Sbjct: 303 LFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYC 362

Query: 560 KDNEI 564
           K N++
Sbjct: 363 KANQV 367



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 98/328 (29%), Positives = 165/328 (50%), Gaps = 13/328 (3%)

Query: 149 GLQVFDQMRVHNLMPHLHACTVLLNSLAK-DRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           GL++  ++      P +   + +++ L K  RL D V  ++++M           YN LI
Sbjct: 198 GLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAV-DIFEEM---SCAPTAITYNSLI 253

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
              C++ D+D+  +LL +M       D+ TY TL++ +CK G   +A  +  +M    +S
Sbjct: 254 GGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLS 313

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
           PD+VT+ SL+ G C EGRM +A  L  +I  +G  P   TY  ++DGYC+AN + +A  L
Sbjct: 314 PDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEEL 373

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMN-EKKIAPDNVTCNTLI-NAY 383
                ++G  P  VTYN ++   C+ GR   A + L+++N E    P +V    +I +A 
Sbjct: 374 VADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDAL 433

Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY 443
           C+ G T  A++    M++ G +    T+  ++   CKA +   A ELL  M+  G +P  
Sbjct: 434 CRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGP 493

Query: 444 CSYSWLVDGYCNKNNEEALLKLLDEFVS 471
            +   +V  YC       +++  DE  S
Sbjct: 494 GTCDAVVSAYCRAG----MIQKADELAS 517



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 78/300 (26%), Positives = 131/300 (43%), Gaps = 39/300 (13%)

Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRL 325
           ++P  + +N +I G CR GR+R A  ++R +  A P                        
Sbjct: 1   MNPGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAHP------------------------ 36

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
                     P  +TY  ++  L K  R+RDA ++L EM   +  PDN T   ++ + C 
Sbjct: 37  ----------PDFLTYTKLVHGLSKARRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLC- 85

Query: 386 IGDTAS-AMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           +GD    A ++   ML  G+  +  TY AL+ G CK + +D A  L+  M + G +P+  
Sbjct: 86  LGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALVETMAERGCAPTVV 145

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
           +Y+ ++ G+C     +     +++ V+ G   D+  Y ALI  FCK   V     L   +
Sbjct: 146 TYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEV 205

Query: 505 QGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
              G   D V Y+++     +AG  +   DI ++M      IT   Y S    Y +  ++
Sbjct: 206 TRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSCAPTAIT---YNSLIGGYCRAGDM 262



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 70/280 (25%), Positives = 122/280 (43%), Gaps = 42/280 (15%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           +D + +F++M   +  P       L+    +    D   ++  KMV      ++  Y  L
Sbjct: 231 RDAVDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTL 287

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           + A CK   +D   +L  +M    +  D+ T+ +L+   C +G   +AL + + + R G 
Sbjct: 288 MSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGC 347

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALR 324
            P I TYN ++ G+C+  ++R+A  L  D +  G  PN VTY  L+ G CRA   ++AL+
Sbjct: 348 PPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQ 407

Query: 325 -------------------------------------LREVMAAKGVYPGVVTYNSILRK 347
                                                  E M  +G  P   T+ +++  
Sbjct: 408 YLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFA 467

Query: 348 LCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
           LCK  + + A+ LL EM +    P   TC+ +++AYC+ G
Sbjct: 468 LCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAG 507



 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 74/315 (23%), Positives = 147/315 (46%), Gaps = 27/315 (8%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLST--------------PSVLNA 118
            +   + ++ T+I  L K    + A ++ E+++      T                 +  
Sbjct: 209 GFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSCAPTAITYNSLIGGYCRAGDMDEAIRL 268

Query: 119 LVKIHDD---PDGNSHVLSWLVIFYANLKMTQ--DGLQVFDQMRVHNLMPHLHACTVLLN 173
           L K+ DD   PD    V+++  +  A  KM +  D  ++F QM  + L P +   T L++
Sbjct: 269 LGKMVDDKCAPD----VVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVD 324

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
            L  +   +   ++ +++ + G    I+ YN ++   CK++ V K E+L+ +   +    
Sbjct: 325 GLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVP 384

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREG--ISPDIVTYNSLIHGFCREGRMREARR 291
           +  TYN L+A  C+ G   +AL   D++  EG      +  Y  ++   CR+GR  +A +
Sbjct: 385 NTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQ 444

Query: 292 LFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLC 349
            + ++  +G  P   T+ T++   C+A+  ++A  L E M   G  PG  T ++++   C
Sbjct: 445 FYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYC 504

Query: 350 KEGRIRDANRLLNEM 364
           + G I+ A+ L +E+
Sbjct: 505 RAGMIQKADELASEL 519



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 60/231 (25%), Positives = 105/231 (45%), Gaps = 1/231 (0%)

Query: 336 PGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKV 395
           PG + +N ++  LC+ GR+R A  +  +MN+    PD +T   L++   K      A++V
Sbjct: 3   PGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAH-PPDFLTYTKLVHGLSKARRLRDAVQV 61

Query: 396 KNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCN 455
              M+ A  + D  T   ++   C    +D A+EL+  ML  G + +  +YS LVDG C 
Sbjct: 62  LQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCK 121

Query: 456 KNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVI 515
               +  + L++    RG    V  Y ++I  FC+  +VD A      M   G   D + 
Sbjct: 122 CERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIIT 181

Query: 516 YTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
           YT+L   + ++ +     ++L ++ RR     +  Y +      K   + D
Sbjct: 182 YTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRD 232



 Score = 41.6 bits (96), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 41/246 (16%), Positives = 93/246 (37%), Gaps = 19/246 (7%)

Query: 54  CHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTP 113
           C +  L  A+  + +         + +  +++  L      + A  +LE+I  R    T 
Sbjct: 292 CKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTI 351

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
              N +V      DG           Y      +   ++    R    +P+     +L+ 
Sbjct: 352 YTYNCVV------DG-----------YCKANQVRKAEELVADFRSRGFVPNTVTYNILVA 394

Query: 174 SLAKDRLTDMVWKVYKKMVQLG--VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDV 231
              +   TD   +   ++   G     ++ +Y +++ A C+    D   +   EM  +  
Sbjct: 395 GCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGY 454

Query: 232 RADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARR 291
                T+ T++   CK     +A  + + M + G +P   T ++++  +CR G +++A  
Sbjct: 455 VPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADE 514

Query: 292 LFRDIK 297
           L  +++
Sbjct: 515 LASELR 520


>gi|255565812|ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536825|gb|EEF38464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 784

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 122/410 (29%), Positives = 214/410 (52%), Gaps = 2/410 (0%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N +  + LV  Y  L   ++  QV D M  +N++P +    +L+  L KD   D  +++ 
Sbjct: 281 NRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRLK 340

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
            +M  L ++ ++  YN LI+ C   S   K  +L+ +ME K V+ +  TYN ++  Y K+
Sbjct: 341 DEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKE 400

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTY 306
           G    A     +ME  G SPD VT+N+LI+G+C+ GR+ EA R+  ++  KG   N VT 
Sbjct: 401 GKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTL 460

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
            T++   C    L++A +L    + +G +   V+Y +++    K+G+  +A +L +EM E
Sbjct: 461 NTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKE 520

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
           K+I P  +T NT+I   C  G T  ++   N +LE+GL+ D+ TY  +I G+C+  +++ 
Sbjct: 521 KEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVEK 580

Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
           A +    M+   F P   + + L+ G C +   +  LKL + ++S+G  +D   Y  +I 
Sbjct: 581 AFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIIS 640

Query: 487 RFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDIL 536
             CK+++ + A  L   M+   +  D   Y ++  A   AG  K   + +
Sbjct: 641 GLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILSALADAGRMKEAEEFM 690



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 123/425 (28%), Positives = 216/425 (50%), Gaps = 4/425 (0%)

Query: 156 MRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSD 215
           M+ + L+P+ +   +L++   K        +V   M Q  V+ ++  YN+LI   CK   
Sbjct: 273 MKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGK 332

Query: 216 VDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNS 275
           +D+  +L  EME   +  D+ TYNTLI          +   + D+ME +G+ P+ VTYN 
Sbjct: 333 IDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNV 392

Query: 276 LIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKG 333
           ++  + +EG+M  A    R ++  G +P+ VT+ TLI+GYC+A  L EA R+ + M+ KG
Sbjct: 393 VVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKG 452

Query: 334 VYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAM 393
           +    VT N+IL  LC E ++ DA +LL+  +++    D V+  TLI  Y K G +  AM
Sbjct: 453 LKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAM 512

Query: 394 KVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGY 453
           K+ + M E  ++    TY  +I G C + + D + + L  +L++G  P   +Y+ ++ GY
Sbjct: 513 KLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGY 572

Query: 454 CNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDS 513
           C +   E   +  ++ V +    D+     L+R  C +  +D A +LFN     G   D+
Sbjct: 573 CREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGKAIDA 632

Query: 514 VIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDL--FWSH 571
           V Y ++     +    +   D+L +M  ++L      Y +  ++ A    + +   F S 
Sbjct: 633 VTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILSALADAGRMKEAEEFMSR 692

Query: 572 VVDRG 576
           +V++G
Sbjct: 693 IVEQG 697



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 112/408 (27%), Positives = 202/408 (49%), Gaps = 40/408 (9%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVW---KVYKKMVQLGVVANIHLYNVLI 207
           Q+F++M+  +L P+L  C  L+N+L +      V+    ++  +++LGV  N + +N+LI
Sbjct: 160 QIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAIFSDVIKLGVKVNTNTFNILI 219

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           + C                                   C +    EA+ +  +M+     
Sbjct: 220 YGC-----------------------------------CIENKLSEAIGLIGKMKDFSCF 244

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRL 325
           PD V+YN+++   C++G++ EAR L  D+K  G  PN  T+  L+ GYC+   L+EA ++
Sbjct: 245 PDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQV 304

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
            ++MA   V P V TYN ++  LCK+G+I +A RL +EM   K+ PD VT NTLIN    
Sbjct: 305 IDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFD 364

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
              +    ++ ++M   G+  +  TY  ++  + K  +MD A   L  M ++GFSP   +
Sbjct: 365 CSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVT 424

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           ++ L++GYC         +++DE   +GL ++      ++   C + K+D A +L +   
Sbjct: 425 FNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSAS 484

Query: 506 GNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRS 553
             G   D V Y +L   Y++ G+      + D+M  + ++ ++  Y +
Sbjct: 485 KRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNT 532



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 92/322 (28%), Positives = 163/322 (50%), Gaps = 5/322 (1%)

Query: 228 FKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR---EG 284
           FK V++     +T I  Y      + A  + +RM+R  + P+++T N+LI+   R   + 
Sbjct: 132 FKKVQSLRVILDTSIGAYVACNRPHHAAQIFNRMKRLHLKPNLLTCNTLINALVRYPSKP 191

Query: 285 RMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYN 342
            +  ++ +F D+   G   N  T+  LI G C  N L EA+ L   M     +P  V+YN
Sbjct: 192 SVYLSKAIFSDVIKLGVKVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYN 251

Query: 343 SILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEA 402
           +IL  LCK+G++ +A  LL +M    + P+  T N L++ YCK+G    A +V + M + 
Sbjct: 252 TILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQN 311

Query: 403 GLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEAL 462
            ++ D +TY  LI G CK  ++D A  L   M +    P   +Y+ L++G  + ++    
Sbjct: 312 NVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKG 371

Query: 463 LKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYA 522
            +L+D+   +G+  +   Y  +++ + K+ K+D A      M+ +G   D V + +L   
Sbjct: 372 FELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLING 431

Query: 523 YWRAGEPKACSDILDDMYRRRL 544
           Y +AG       ++D+M R+ L
Sbjct: 432 YCKAGRLSEAFRMMDEMSRKGL 453



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 80/350 (22%), Positives = 147/350 (42%), Gaps = 44/350 (12%)

Query: 46  VLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIA 105
            L+N Y  C    LS AF    E +    K +  +  T++H L   +    A  +L   +
Sbjct: 427 TLINGY--CKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSAS 484

Query: 106 LRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHL 165
            R +                 D  S+    L++ Y     + + ++++D+M+   ++P +
Sbjct: 485 KRGYFV---------------DEVSY--GTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSI 527

Query: 166 HACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCE 225
                ++  L     TD       ++++ G+V +   YN +I   C+   V+K  +   +
Sbjct: 528 ITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNK 587

Query: 226 MEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGR 285
           M  K  + DLFT N L+   C +GM  +AL + +    +G + D VTYN++I G C+E R
Sbjct: 588 MVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDR 647

Query: 286 MREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVY-------- 335
             EA  L  ++  K   P+  TY  ++     A  ++EA      +  +G          
Sbjct: 648 FEEAFDLLAEMEEKKLGPDCYTYNAILSALADAGRMKEAEEFMSRIVEQGKLQDQTISLN 707

Query: 336 ---------------PGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIA 370
                          P  VT++  + +LC +G+ +DA  ++ E  +K I 
Sbjct: 708 KRKIESSSETSQESDPNSVTFSEQINELCTQGKYKDAMHMVQESTQKGIT 757



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 52/222 (23%), Positives = 99/222 (44%), Gaps = 27/222 (12%)

Query: 116 LNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSL 175
           LN L++    PD  ++  + +++ Y      +   Q  ++M   +  P L  C +LL  L
Sbjct: 550 LNELLESGLVPDETTY--NTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGL 607

Query: 176 AKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADL 235
             + + D   K++   +  G   +   YN +I   CK    ++   LL EME K +  D 
Sbjct: 608 CTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDC 667

Query: 236 FTYNTLIALYCKKGMHYEA------LAVQDRMEREGIS-----------------PDIVT 272
           +TYN +++     G   EA      +  Q +++ + IS                 P+ VT
Sbjct: 668 YTYNAILSALADAGRMKEAEEFMSRIVEQGKLQDQTISLNKRKIESSSETSQESDPNSVT 727

Query: 273 YNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDG 312
           ++  I+  C +G+ ++A  + ++   KG T +  TY +L++G
Sbjct: 728 FSEQINELCTQGKYKDAMHMVQESTQKGITLHKSTYISLMEG 769



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/219 (22%), Positives = 88/219 (40%), Gaps = 38/219 (17%)

Query: 353 RIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVK---NRMLEAGLMLDQF 409
           R   A ++ N M    + P+ +TCNTLINA  +     S    K   + +++ G+ ++  
Sbjct: 154 RPHHAAQIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAIFSDVIKLGVKVNTN 213

Query: 410 TYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEF 469
           T+  LI+G C   ++  A  L+  M D    P   SY+ ++D                  
Sbjct: 214 TFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILD------------------ 255

Query: 470 VSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEP 529
                              CKK K++ A+ L   M+ NG+L +   +  L   Y + G  
Sbjct: 256 -----------------VLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWL 298

Query: 530 KACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLF 568
           K  + ++D M +  ++  +  Y        KD +I + F
Sbjct: 299 KEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAF 337


>gi|242084804|ref|XP_002442827.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
 gi|241943520|gb|EES16665.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
          Length = 899

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 135/524 (25%), Positives = 248/524 (47%), Gaps = 37/524 (7%)

Query: 23  KGHWAKLLNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHW 82
           KG   K L P++ ++  +      +  L      P+ + AFF+W  +  P ++H+  SH 
Sbjct: 39  KGRAYKRLAPSVTAAHVADLFRAPVAPLD-----PATALAFFEWV-ARRPGFRHTAASHA 92

Query: 83  TMIHILTKNKHFKSAQNMLEKI-----ALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLV 137
            ++ +L + +   +   ++  +        D       + A+ ++     G+     WL+
Sbjct: 93  ALLQLLARRRAPANYDKLVVSMVSCSDTAEDMREAVDAIQAIRRV----GGDLRKACWLL 148

Query: 138 IFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVV 197
           +                 M +     + ++ T+L+  L + R       +   MVQ G  
Sbjct: 149 MM----------------MPLMGCRRNEYSYTILIQGLCETRCVREALVLLVMMVQDGCS 192

Query: 198 ANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAV 257
            N+H Y +LI   CK   +    ++L EM  + V   ++TYN +I  YCK G   +AL +
Sbjct: 193 LNLHTYTLLIKGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGI 252

Query: 258 QDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCR 315
           +  MER G +PD  TYN LI+G C E +  EA  L  D  ++G TP  +T+T +I+GYC+
Sbjct: 253 KALMERNGCNPDDWTYNILIYGLCGE-KPDEAEELLNDAIVRGFTPTVITFTNIINGYCK 311

Query: 316 ANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVT 375
           A  +++ALR++  M +      +  Y  ++  L K+ R ++A   ++EM    +AP+ V 
Sbjct: 312 AERIDDALRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVI 371

Query: 376 CNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGML 435
             ++I+ YCK+G   +A++V   M   G   + +TY +LI+G  + +++  A  L+  M 
Sbjct: 372 YTSIIDGYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQ 431

Query: 436 DAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVD 495
           + G +P   +Y+ L+ G C K+  +   +L +     GL  D   Y  L    CK  +  
Sbjct: 432 EDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSGR-- 489

Query: 496 YAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
            A+  ++ +   G++   V YTSL   + +AG     + +++ M
Sbjct: 490 -AEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKM 532



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 122/480 (25%), Positives = 217/480 (45%), Gaps = 23/480 (4%)

Query: 77  SLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWL 136
           +L ++  +I  L K      A+ +LE++ LR  + +    NA++      DG        
Sbjct: 194 NLHTYTLLIKGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMI------DG-------- 239

Query: 137 VIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGV 196
              Y      +D L +   M  +   P      +L+  L  ++  D   ++    +  G 
Sbjct: 240 ---YCKSGRMKDALGIKALMERNGCNPDDWTYNILIYGLCGEK-PDEAEELLNDAIVRGF 295

Query: 197 VANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALA 256
              +  +  +I+  CK+  +D   ++   M   + + DL  Y  LI +  KK    EA  
Sbjct: 296 TPTVITFTNIINGYCKAERIDDALRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKE 355

Query: 257 VQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR--DIKGATPNHVTYTTLIDGYC 314
               M   G++P++V Y S+I G+C+ G++  A  +FR  + +G  PN  TY++LI G  
Sbjct: 356 TVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLI 415

Query: 315 RANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNV 374
           +   L +A+ L   M   G+ PGV+TY ++++  CK+    +A RL   M +  + PD  
Sbjct: 416 QDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQ 475

Query: 375 TCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGM 434
             N L +A CK G    A      ++  G++L + TY +L+ GF KA   D A  L+  M
Sbjct: 476 AYNVLTHALCKSGRAEEAYSF---LVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKM 532

Query: 435 LDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKV 494
           ++ G      +YS L+   C +      L +LD+    G+  ++  Y  +I    K+ K 
Sbjct: 533 VNEGCKADSYTYSVLLQALCKQKKLNEALSILDQMTLSGVKCNIVAYTIIISEMIKEGKH 592

Query: 495 DYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSF 554
           D+A+ +FN M  +G    +  YT    +Y + G+ +    ++ +M R  +   +  Y  F
Sbjct: 593 DHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVAPDVVTYNVF 652



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 143/528 (27%), Positives = 213/528 (40%), Gaps = 52/528 (9%)

Query: 28  KLLNPNIASSLTSTAIHKVLLNLYNC-CHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIH 86
           +LLN  I    T T I     N+ N  C    +  A          N K  LQ++  +I+
Sbjct: 285 ELLNDAIVRGFTPTVI--TFTNIINGYCKAERIDDALRVKTSMLSSNCKLDLQAYGVLIN 342

Query: 87  ILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMT 146
           +L K   FK A+  + ++          +  +++      DG           Y  +   
Sbjct: 343 VLIKKCRFKEAKETVSEMFANGLAPNVVIYTSII------DG-----------YCKVGKV 385

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
              L+VF  M      P+    + L+  L +D+       +  KM + G+   +  Y  L
Sbjct: 386 GAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTL 445

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           I   CK  + D   +L   ME   +  D   YN L    CK G   EA +    + R+G+
Sbjct: 446 IQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSGRAEEAYSF---LVRKGV 502

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
               VTY SL+ GF + G    A  L   +  +G   +  TY+ L+   C+   L EAL 
Sbjct: 503 VLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALS 562

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           + + M   GV   +V Y  I+ ++ KEG+   A  + NEM      P   T    I++YC
Sbjct: 563 ILDQMTLSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISSYC 622

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           KIG    A  +   M   G+  D  TY   I+G      MD A   L  M+DA   P+Y 
Sbjct: 623 KIGQIEEAEHLIGEMERDGVAPDVVTYNVFINGCGHMGYMDRAFSTLKRMIDASCEPNYW 682

Query: 445 SYSW----------LVD-------GYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRR 487
           +Y W          LVD       G  N    + + +LL+  V  GL      Y ++I  
Sbjct: 683 TY-WILLKHFLKMSLVDAHYVDTSGMWNWIELDTVWQLLERMVKHGLNPTAVTYSSIIAG 741

Query: 488 FCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDI 535
           FCK  +++ A  LF+ M+G  I  +  IYT L          K C DI
Sbjct: 742 FCKATRLEEACVLFDHMRGKDISPNEEIYTMLI---------KCCCDI 780



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 95/334 (28%), Positives = 146/334 (43%), Gaps = 23/334 (6%)

Query: 169 TVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEF 228
           +VLL +L K +  +    +  +M   GV  NI  Y ++I    K    D  + +  EM  
Sbjct: 545 SVLLQALCKQKKLNEALSILDQMTLSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNEMIS 604

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
              +    TY   I+ YCK G   EA  +   MER+G++PD+VTYN  I+G    G M  
Sbjct: 605 SGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVAPDVVTYNVFINGCGHMGYMDR 664

Query: 289 ARRLFRDIKGAT--PNHVTYTTLIDGYCRAN----------------DLEEALRLREVMA 330
           A    + +  A+  PN+ TY  L+  + + +                +L+   +L E M 
Sbjct: 665 AFSTLKRMIDASCEPNYWTYWILLKHFLKMSLVDAHYVDTSGMWNWIELDTVWQLLERMV 724

Query: 331 AKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTA 390
             G+ P  VTY+SI+   CK  R+ +A  L + M  K I+P+      LI   C I    
Sbjct: 725 KHGLNPTAVTYSSIIAGFCKATRLEEACVLFDHMRGKDISPNEEIYTMLIKCCCDIKLFG 784

Query: 391 SAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL---LFGMLDAGFSPSYCSYS 447
            A+     M+E G      +Y  LI G C   + D AK L   L GM D  ++ +  ++ 
Sbjct: 785 KAVSFVTDMIEFGFQPHLESYHYLIVGLCDEGDYDKAKSLFCDLLGMED--YNHNEVAWK 842

Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVY 481
            L DG     + +   +LL    +R   +D   Y
Sbjct: 843 ILNDGLLKAGHVDFCSQLLSAMENRHCQIDSETY 876



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 66/249 (26%), Positives = 111/249 (44%), Gaps = 1/249 (0%)

Query: 316 ANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVT 375
             DL +A  L  +M   G      +Y  +++ LC+   +R+A  LL  M +   + +  T
Sbjct: 138 GGDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLVMMVQDGCSLNLHT 197

Query: 376 CNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGML 435
              LI   CK G    A +V   M   G++   +TY A+I G+CK+  M  A  +   M 
Sbjct: 198 YTLLIKGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALME 257

Query: 436 DAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVD 495
             G +P   +Y+ L+ G C +  +EA  +LL++ + RG    V  +  +I  +CK E++D
Sbjct: 258 RNGCNPDDWTYNILIYGLCGEKPDEA-EELLNDAIVRGFTPTVITFTNIINGYCKAERID 316

Query: 496 YAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFS 555
            A R+   M  +    D   Y  L     +    K   + + +M+   L   + IY S  
Sbjct: 317 DALRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSII 376

Query: 556 ASYAKDNEI 564
             Y K  ++
Sbjct: 377 DGYCKVGKV 385



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 80/181 (44%), Gaps = 3/181 (1%)

Query: 387 GDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSY 446
           GD   A  +   M   G   ++++Y  LI G C+ + +  A  LL  M+  G S +  +Y
Sbjct: 139 GDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLVMMVQDGCSLNLHTY 198

Query: 447 SWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQG 506
           + L+ G C +       ++L+E   RG+   V  Y A+I  +CK  ++  A  +  LM+ 
Sbjct: 199 TLLIKGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMER 258

Query: 507 NGILGDSVIYTSLAYAYWRAGE-PKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEIL 565
           NG   D   Y  L Y     GE P    ++L+D   R    T+  + +    Y K   I 
Sbjct: 259 NGCNPDDWTYNILIYGL--CGEKPDEAEELLNDAIVRGFTPTVITFTNIINGYCKAERID 316

Query: 566 D 566
           D
Sbjct: 317 D 317



 Score = 40.0 bits (92), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 34/162 (20%), Positives = 66/162 (40%), Gaps = 13/162 (8%)

Query: 69  SAVPNYKHSLQSHWTMIHILTK----NKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHD 124
           S  PNY     ++W ++    K    + H+     M   I L    +   +L  +VK   
Sbjct: 676 SCEPNY----WTYWILLKHFLKMSLVDAHYVDTSGMWNWIELD---TVWQLLERMVKHGL 728

Query: 125 DPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMV 184
           +P   ++  S ++  +      ++   +FD MR  ++ P+    T+L+      +L    
Sbjct: 729 NPTAVTY--SSIIAGFCKATRLEEACVLFDHMRGKDISPNEEIYTMLIKCCCDIKLFGKA 786

Query: 185 WKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEM 226
                 M++ G   ++  Y+ LI   C   D DK + L C++
Sbjct: 787 VSFVTDMIEFGFQPHLESYHYLIVGLCDEGDYDKAKSLFCDL 828


>gi|449515696|ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cucumis sativus]
          Length = 657

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 137/466 (29%), Positives = 227/466 (48%), Gaps = 73/466 (15%)

Query: 190 KMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVR----------------- 232
           ++ + G+V N   Y+VLI  CCK+ +++K  +   EM+ K +R                 
Sbjct: 170 EISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQ 229

Query: 233 -----------------ADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNS 275
                            A++FT+NTL++  CK+G   EA  + D +  +GISP++V+YN+
Sbjct: 230 SWQNAFTMFNDALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNN 289

Query: 276 LIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEAL----RLREV- 328
           +I G CR+  +  A ++++++   G TPN VT+T L+DGY +  D+E A     R+++  
Sbjct: 290 IILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDAN 349

Query: 329 ------------------------------MAAKGVYPGVVTYNSILRKLCKEGRIRDAN 358
                                           ++G  P  + YN+I+    KEG I  A+
Sbjct: 350 ILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLAS 409

Query: 359 RLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGF 418
            +  EM E  I P  VT  +LI+ +CK  +   A+K+ N M   GL +D   Y  LI GF
Sbjct: 410 NVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGF 469

Query: 419 CKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDV 478
           CK ++M  A ELL  +  AG SP+   Y+ ++ G+ N NN E  + L  + V+ G+  D+
Sbjct: 470 CKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDL 529

Query: 479 SVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDD 538
             Y +LI    K  ++ YA  +   M   GIL D   +T L       G+ +    IL+D
Sbjct: 530 KTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILED 589

Query: 539 MYRRRLMITLKIYRSFSASYAKDNEILDLFWSH--VVDRGLMSKHI 582
           M  + ++ ++ IY +  A + K+  + + F  H  ++DRGL+  +I
Sbjct: 590 MNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNI 635



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 114/472 (24%), Positives = 206/472 (43%), Gaps = 39/472 (8%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           L +  +MR    +P     T ++ +  K+       ++   MV  G   N+ +   L+  
Sbjct: 95  LSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKG 154

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
            C   ++     L+ E+    +  +  TY+ LI   CK G   +A      M+ +GI   
Sbjct: 155 YCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSS 214

Query: 270 IVTYNSLIHGF----------------------------------CREGRMREARRLFRD 295
           + + NS++ G+                                  C+EG+M EA  L+ +
Sbjct: 215 VYSLNSILEGYLKCQSWQNAFTMFNDALESGLANVFTFNTLLSWLCKEGKMNEACNLWDE 274

Query: 296 I--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGR 353
           +  KG +PN V+Y  +I G+CR +++  A ++ + M   G  P  VT+  ++    K+G 
Sbjct: 275 VIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGD 334

Query: 354 IRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKA 413
           I +A  + + M +  I P + T   +I   CK G +     + N+ +  G +     Y  
Sbjct: 335 IENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNT 394

Query: 414 LIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
           +I GF K   +++A  +   M + G +PS  +Y+ L+DG+C  NN +  LKLL++   +G
Sbjct: 395 IIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKG 454

Query: 474 LCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACS 533
           L +D+  Y  LI  FCK+  +  A  L N ++G G+  +  IY S+   +      +   
Sbjct: 455 LKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAI 514

Query: 534 DILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKE 585
           D+   M    +   LK Y S      K   +L   ++  +   ++SK I  +
Sbjct: 515 DLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLL---YASDIHTEMLSKGILPD 563



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 120/477 (25%), Positives = 228/477 (47%), Gaps = 22/477 (4%)

Query: 53  CCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLST 112
           CC   ++  AF  ++E      + S+ S  +++    K + +++A  M    AL   L+ 
Sbjct: 190 CCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFND-ALESGLAN 248

Query: 113 PSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHA-CTVL 171
               N L             LSWL       KM +    ++D++    + P++ +   ++
Sbjct: 249 VFTFNTL-------------LSWLC---KEGKMNE-ACNLWDEVIAKGISPNVVSYNNII 291

Query: 172 LNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDV 231
           L    KD + +   KVYK+M+  G   N   + +L+    K  D++    +   M+  ++
Sbjct: 292 LGHCRKDNI-NAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANI 350

Query: 232 RADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARR 291
                T   +I   CK G  +E   + ++   +G  P  + YN++I GF +EG +  A  
Sbjct: 351 LPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASN 410

Query: 292 LFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLC 349
           ++R++   G TP+ VTYT+LIDG+C+ N+++ AL+L   M  KG+   +  Y +++   C
Sbjct: 411 VYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFC 470

Query: 350 KEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQF 409
           K   ++ A+ LLNE+    ++P+    N++I  +  + +   A+ +  +M+  G+  D  
Sbjct: 471 KRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLK 530

Query: 410 TYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEF 469
           TY +LI G  K+  +  A ++   ML  G  P   +++ L++G CNK   E   K+L++ 
Sbjct: 531 TYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDM 590

Query: 470 VSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRA 526
             + +   V +Y  LI    K+  +  A RL + M   G++ D++ Y  L    ++ 
Sbjct: 591 NGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNGKFKG 647



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 112/471 (23%), Positives = 198/471 (42%), Gaps = 71/471 (15%)

Query: 161 LMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVE 220
           + P +    +LL ++ +  +T    +++ KM+ +GV  +    +V++ AC K  ++ + E
Sbjct: 1   MTPSIQCMNILLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAE 60

Query: 221 KLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGF 280
           +   + + + V  D   Y+  + L C K     AL++   M   G  P   T+ S+I   
Sbjct: 61  QHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITAC 120

Query: 281 CREGRMREARRLFRDI-------------------------------------KGATPNH 303
            +EG + EA RL  D+                                      G  PN 
Sbjct: 121 VKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNK 180

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGV----------------------------- 334
           VTY+ LIDG C+  ++E+A      M  KG+                             
Sbjct: 181 VTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFND 240

Query: 335 -----YPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
                   V T+N++L  LCKEG++ +A  L +E+  K I+P+ V+ N +I  +C+  + 
Sbjct: 241 ALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNI 300

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
            +A KV   ML+ G   +  T+  L+ G+ K  +++ A  +   M DA   P+  +   +
Sbjct: 301 NAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGII 360

Query: 450 VDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGI 509
           + G C          L ++FVS+G       Y  +I  F K+  ++ A  ++  M   GI
Sbjct: 361 IKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGI 420

Query: 510 LGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAK 560
              +V YTSL   + +         +L+DM R+ L + +K Y +    + K
Sbjct: 421 TPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCK 471



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/280 (23%), Positives = 113/280 (40%), Gaps = 3/280 (1%)

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
           TP+      L+    R N   EA  L   M   GV     T + +LR   KEG I +A +
Sbjct: 2   TPSIQCMNILLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAEQ 61

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
              +   + +  D    +  ++  C   ++  A+ +   M  AG +  + T+ ++I    
Sbjct: 62  HFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACV 121

Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
           K   +  A  L   M++ G S +    + L+ GYC + N  + L L++E    GL  +  
Sbjct: 122 KEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKV 181

Query: 480 VYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
            Y  LI   CK   ++ A   ++ M+  GI        S+   Y +    +    + +D 
Sbjct: 182 TYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDA 241

Query: 540 YRRRL--MITLKIYRSFSASYAKDNEILDLFWSHVVDRGL 577
               L  + T     S+     K NE  +L W  V+ +G+
Sbjct: 242 LESGLANVFTFNTLLSWLCKEGKMNEACNL-WDEVIAKGI 280


>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63130, mitochondrial; Flags: Precursor
 gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
 gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
 gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
 gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 630

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 150/535 (28%), Positives = 254/535 (47%), Gaps = 27/535 (5%)

Query: 36  SSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFK 95
           SS  +  +H+ LL    C   P              P++ H   S W       +  + K
Sbjct: 8   SSTGNRFVHRSLLGKGKCGTAP--------------PSFSHC--SFWVRDFSGVRYDYRK 51

Query: 96  SAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVF-- 153
            + N L  + L D ++   +   +VK    P     ++ +  +  A  KM +  L +   
Sbjct: 52  ISINRLNDLKLDDAVN---LFGDMVKSRPFP----SIVEFSKLLSAIAKMNKFDLVISLG 104

Query: 154 DQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKS 213
           +QM+   +  +L+  ++L+N   +     +   V  KM++LG   +I   N L++  C  
Sbjct: 105 EQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHG 164

Query: 214 SDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTY 273
           + +     L+ +M     + D FT+NTLI    +     EA+A+ DRM  +G  PD+VTY
Sbjct: 165 NRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTY 224

Query: 274 NSLIHGFCREGRMREARRLFRDIKGA--TPNHVTYTTLIDGYCRANDLEEALRLREVMAA 331
             +++G C+ G +  A  L + ++     P  V Y T+ID  C   ++ +AL L   M  
Sbjct: 225 GIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDN 284

Query: 332 KGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTAS 391
           KG+ P VVTYNS++R LC  GR  DA+RLL++M E+KI P+ VT + LI+A+ K G    
Sbjct: 285 KGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVE 344

Query: 392 AMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVD 451
           A K+ + M++  +  D FTY +LI+GFC    +D AK +   M+     P+  +Y+ L+ 
Sbjct: 345 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIK 404

Query: 452 GYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILG 511
           G+C     +  ++L  E   RGL  +   Y  LI  F +  + D AQ +F  M  +G+L 
Sbjct: 405 GFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLP 464

Query: 512 DSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
           D + Y+ L       G+ +    + + + R ++   +  Y        K  ++ D
Sbjct: 465 DIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVED 519



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 120/434 (27%), Positives = 223/434 (51%), Gaps = 4/434 (0%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           S++  +V++   PD  S   + L+          + + + D+M V    P L    +++N
Sbjct: 172 SLVGQMVEMGYQPD--SFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVN 229

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
            L K    D+   + KKM Q  +   + +YN +I A C   +V+    L  EM+ K +R 
Sbjct: 230 GLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRP 289

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           ++ TYN+LI   C  G   +A  +   M    I+P++VT+++LI  F +EG++ EA +L+
Sbjct: 290 NVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 349

Query: 294 RDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
            ++  +   P+  TY++LI+G+C  + L+EA  + E+M +K  +P VVTYN++++  CK 
Sbjct: 350 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKA 409

Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
            R+ +   L  EM+++ +  + VT  TLI+ + +  +  +A  V  +M+  G++ D  TY
Sbjct: 410 KRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTY 469

Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
             L+ G C   +++ A  +   +  +   P   +Y+ +++G C     E    L      
Sbjct: 470 SILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSL 529

Query: 472 RGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKA 531
           +G+  +V  Y  ++  FC+K   + A  LF  M+  G L DS  Y +L  A+ R G+  A
Sbjct: 530 KGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAA 589

Query: 532 CSDILDDMYRRRLM 545
            ++++ +M   R +
Sbjct: 590 SAELIREMRSCRFV 603



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 125/452 (27%), Positives = 211/452 (46%), Gaps = 4/452 (0%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           +VL  ++K+  +PD     L+ L+  + +     D + +  QM      P       L++
Sbjct: 137 AVLAKMMKLGYEPD--IVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIH 194

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
            L +         +  +MV  G   ++  Y ++++  CK  D+D    LL +ME   +  
Sbjct: 195 GLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEP 254

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
            +  YNT+I   C      +AL +   M+ +GI P++VTYNSLI   C  GR  +A RL 
Sbjct: 255 GVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLL 314

Query: 294 RDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
            D+  +   PN VT++ LID + +   L EA +L + M  + + P + TY+S++   C  
Sbjct: 315 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 374

Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
            R+ +A  +   M  K   P+ VT NTLI  +CK       M++   M + GL+ +  TY
Sbjct: 375 DRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTY 434

Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
             LIHGF +A+E D A+ +   M+  G  P   +YS L+DG CN    E  L + +    
Sbjct: 435 TTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQR 494

Query: 472 RGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKA 531
             +  D+  Y  +I   CK  KV+    LF  +   G+  + V YT++   + R G  + 
Sbjct: 495 SKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEE 554

Query: 532 CSDILDDMYRRRLMITLKIYRSFSASYAKDNE 563
              +  +M     +     Y +   ++ +D +
Sbjct: 555 ADALFREMKEEGPLPDSGTYNTLIRAHLRDGD 586



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 76/267 (28%), Positives = 129/267 (48%), Gaps = 4/267 (1%)

Query: 117 NALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLA 176
           + ++K   DPD  ++  S L+  +       +   +F+ M   +  P++     L+    
Sbjct: 350 DEMIKRSIDPDIFTY--SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFC 407

Query: 177 KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLF 236
           K +  D   +++++M Q G+V N   Y  LIH   ++ + D  + +  +M    V  D+ 
Sbjct: 408 KAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIM 467

Query: 237 TYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF--R 294
           TY+ L+   C  G    AL V + ++R  + PDI TYN +I G C+ G++ +   LF   
Sbjct: 468 TYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSL 527

Query: 295 DIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRI 354
            +KG  PN VTYTT++ G+CR    EEA  L   M  +G  P   TYN+++R   ++G  
Sbjct: 528 SLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDK 587

Query: 355 RDANRLLNEMNEKKIAPDNVTCNTLIN 381
             +  L+ EM   +   D  T   + N
Sbjct: 588 AASAELIREMRSCRFVGDASTIGLVTN 614


>gi|357495705|ref|XP_003618141.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355493156|gb|AES74359.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 846

 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 137/472 (29%), Positives = 229/472 (48%), Gaps = 41/472 (8%)

Query: 58  SLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNML-EKIALRDF--LSTPS 114
           S +  FF W ++ +  +  SLQ++  ++HIL  N+ F  A  +L E I L +   +S   
Sbjct: 119 SSALTFFNWVKNDL-RFTLSLQNYCLIVHILGWNQIFDQAMKLLCELIQLNNVNVVSYDD 177

Query: 115 VLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNS 174
           V   L+   +D + N  +   L+  Y  L M + GL+ F +    + +P++ AC  LLN 
Sbjct: 178 VYKCLIDCTEDCNWNPVIFDMLIKAYVKLGMVEKGLETFWKNVEGSFVPNVVACNCLLNG 237

Query: 175 LAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRAD 234
           L+K       W+VY++M +LG+  N + +N++ H  C+  D DKV   L +ME +    D
Sbjct: 238 LSKINYIGECWEVYEEMGRLGIHRNGYTFNIMTHVLCREGDSDKVNGFLEKMEEEGFEPD 297

Query: 235 LFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR 294
           L TYN LI  YCKK    +A  +   M   G+ P++++Y++L++G C+EG+++EA +LF 
Sbjct: 298 LVTYNILINGYCKKRRLEDAFYLYKIMGIRGVVPNLISYSALMNGLCKEGKIKEAHQLFN 357

Query: 295 DI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEG 352
            +  +G  P+ V+Y TLI GYC+                                  + G
Sbjct: 358 QMVQRGIDPDVVSYNTLISGYCK----------------------------------EGG 383

Query: 353 RIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYK 412
           +++    LL+EM    I PDNVTC  +   Y + G   SA+ +   +   G+ + +  Y 
Sbjct: 384 KMQMCRSLLHEMIGIGIRPDNVTCRIVFQGYTREGKLLSALNMVAELQRFGIKIPENLYD 443

Query: 413 ALIHGFCKAKEMDIAKELLFGM-LDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
            L+   CK      A+  L  +  D  + P   +Y  L +  C+ NN E  L L  E   
Sbjct: 444 YLLVALCKEGRPFAARSFLIRISQDGDYVPEMSTYIKLAESLCSFNNVEEALILKSEMAK 503

Query: 472 RGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAY 523
           + + ++++ Y+A+I   C+ ++   A+ L   M   GIL D  I  +L   Y
Sbjct: 504 KSMKLNLTTYKAIISCLCRVKRTSEAENLLEEMVSLGILPDLEIKRALINGY 555



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/373 (26%), Positives = 163/373 (43%), Gaps = 21/373 (5%)

Query: 84  MIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANL 143
           M H+L +          LEK+    F               +PD  ++ +  L+  Y   
Sbjct: 269 MTHVLCREGDSDKVNGFLEKMEEEGF---------------EPDLVTYNI--LINGYCKK 311

Query: 144 KMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLY 203
           +  +D   ++  M +  ++P+L + + L+N L K+       +++ +MVQ G+  ++  Y
Sbjct: 312 RRLEDAFYLYKIMGIRGVVPNLISYSALMNGLCKEGKIKEAHQLFNQMVQRGIDPDVVSY 371

Query: 204 NVLIHACCK-SSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRME 262
           N LI   CK    +     LL EM    +R D  T   +   Y ++G    AL +   ++
Sbjct: 372 NTLISGYCKEGGKMQMCRSLLHEMIGIGIRPDNVTCRIVFQGYTREGKLLSALNMVAELQ 431

Query: 263 REGISPDIVTYNSLIHGFCREGRMREARRLFRDIK---GATPNHVTYTTLIDGYCRANDL 319
           R GI      Y+ L+   C+EGR   AR     I       P   TY  L +  C  N++
Sbjct: 432 RFGIKIPENLYDYLLVALCKEGRPFAARSFLIRISQDGDYVPEMSTYIKLAESLCSFNNV 491

Query: 320 EEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTL 379
           EEAL L+  MA K +   + TY +I+  LC+  R  +A  LL EM    I PD      L
Sbjct: 492 EEALILKSEMAKKSMKLNLTTYKAIISCLCRVKRTSEAENLLEEMVSLGILPDLEIKRAL 551

Query: 380 INAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGF 439
           IN YC+  D   A+ +     +   + D  +Y A++  FC+   +    EL   ++  G+
Sbjct: 552 INGYCEENDVDKAVSLLKFFAKEFQVYDTESYNAIVKVFCEVGNVAELMELQDKLVKIGY 611

Query: 440 SPSYCSYSWLVDG 452
            P+  +  +++ G
Sbjct: 612 VPNSLTCKYVIRG 624



 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 44/223 (19%), Positives = 85/223 (38%), Gaps = 35/223 (15%)

Query: 339 VTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNR 398
           V ++ +++   K G +        +  E    P+ V CN L+N   KI       +V   
Sbjct: 194 VIFDMLIKAYVKLGMVEKGLETFWKNVEGSFVPNVVACNCLLNGLSKINYIGECWEVYEE 253

Query: 399 MLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNN 458
           M   G+  + +T+  + H  C+  + D     L  M + GF P                 
Sbjct: 254 MGRLGIHRNGYTFNIMTHVLCREGDSDKVNGFLEKMEEEGFEP----------------- 296

Query: 459 EEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTS 518
                             D+  Y  LI  +CKK +++ A  L+ +M   G++ + + Y++
Sbjct: 297 ------------------DLVTYNILINGYCKKRRLEDAFYLYKIMGIRGVVPNLISYSA 338

Query: 519 LAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKD 561
           L     + G+ K    + + M +R +   +  Y +  + Y K+
Sbjct: 339 LMNGLCKEGKIKEAHQLFNQMVQRGIDPDVVSYNTLISGYCKE 381


>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 907

 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 126/393 (32%), Positives = 197/393 (50%), Gaps = 2/393 (0%)

Query: 149 GLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIH 208
           GL++ D+M      P   A + L+  L K    +    + K++ + GV  NI +YN LI 
Sbjct: 316 GLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALID 375

Query: 209 ACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISP 268
           + CK  + D+ E L   M    +  +  TY+ LI ++C++G    AL+    M   G+ P
Sbjct: 376 SLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKP 435

Query: 269 DIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLR 326
            +  YNSLI+G C+ G +  A  L  ++  K   P  VTYT+L+ GYC    + +ALRL 
Sbjct: 436 SVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLY 495

Query: 327 EVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKI 386
             M  KG+ P + T+ ++L  L + G IRDA +L  EM E  + P+ VT N +I  YC+ 
Sbjct: 496 HEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEE 555

Query: 387 GDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSY 446
           G+ + A +  N M+E G++ D ++Y+ LIHG C   +   AK  + G+       +   Y
Sbjct: 556 GNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICY 615

Query: 447 SWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQG 506
           + L+ G+C +   E  L +  +   RG+ +D+  Y  LI    K +       L   M  
Sbjct: 616 TGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHD 675

Query: 507 NGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
            G+  D VIYTS+  A  + G+ K    I D M
Sbjct: 676 RGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLM 708



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 133/555 (23%), Positives = 264/555 (47%), Gaps = 13/555 (2%)

Query: 7   LNSDTKFIKTISAIML-KGHWAKLLNPNIASS-LTSTAIHKVLLNLYNCCHIPSLSCAFF 64
           +  D +F+ ++  I+  K  W   L+  + S  L +  + ++L+   +    P L   FF
Sbjct: 35  IGEDKQFVDSVRRIVRGKRSWEIALSSELVSRRLKTIHVEEILIGTID---DPKLGLRFF 91

Query: 65  KWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS-VLNALVKIH 123
            +       + HS  S   +IH L +   F  A ++L+ + LR     PS V +AL   +
Sbjct: 92  NFL-GLHRGFDHSTASFCILIHALVQANLFWPASSLLQTLLLR--ALKPSEVFDALFSCY 148

Query: 124 DDPD-GNSHVLSWLVIFYANLKMTQDGLQVFDQMRVH-NLMPHLHACTVLLNSLAKDRLT 181
           +     +S     L+  Y   +   DG+ VF  M    +L+P +   + LL+ L K R  
Sbjct: 149 EKCKLSSSSSFDLLIQHYVRSRRVLDGVLVFKMMMTKVSLLPEVRTLSALLHGLVKFRHF 208

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
            +  +++  M+ +G+  ++++Y  +I + C+  D+ + ++++ +ME      ++  YN L
Sbjct: 209 GLAMELFDDMINVGIRPDVYIYTGVIRSLCELKDLSRAKEMIVQMEATGCDVNIVPYNVL 268

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGA-- 299
           I   CKK   +EA+ ++  +  + + PD+VTY +L+ G C+         +  ++     
Sbjct: 269 IDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRF 328

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
           +P+    ++L++G  +   +EEAL L + +A  GV P +  YN+++  LCK     +A  
Sbjct: 329 SPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAEL 388

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
           L + M +  + P++VT + LI+ +C+ G   +A+     M++ GL    + Y +LI+G C
Sbjct: 389 LFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHC 448

Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
           K  ++  A+ L+  M++    P+  +Y+ L+ GYC+K      L+L  E   +G+   + 
Sbjct: 449 KFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIY 508

Query: 480 VYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
            +  L+    +   +  A +LF  M    +  + V Y  +   Y   G      + L++M
Sbjct: 509 TFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEM 568

Query: 540 YRRRLMITLKIYRSF 554
             + ++     YR  
Sbjct: 569 IEKGIVPDTYSYRPL 583



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 107/398 (26%), Positives = 186/398 (46%), Gaps = 39/398 (9%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           L+++ +M    ++P ++  T LL+ L +  L     K++ +M +  V  N   YNV+I  
Sbjct: 492 LRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEG 551

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
            C+  ++ K  + L EM  K +  D ++Y  LI   C  G   EA    D + +     +
Sbjct: 552 YCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELN 611

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDI--------------------------------- 296
            + Y  L+HGFCREG++ EA  + +D+                                 
Sbjct: 612 EICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLK 671

Query: 297 ----KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEG 352
               +G  P+ V YT++ID   +  D +EA  + ++M  +G  P  VTY +++  LCK G
Sbjct: 672 EMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAG 731

Query: 353 RIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK-IGDTASAMKVKNRMLEAGLMLDQFTY 411
            + +A  L ++M      P+ VT    ++   K +GD   A+++ N +L+ GL+ +  TY
Sbjct: 732 FVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAILK-GLLANTATY 790

Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
             LI GFC+   M+ A EL+  M+  G SP   +Y+ ++   C +N+ +  ++L +    
Sbjct: 791 NMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSMTE 850

Query: 472 RGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGI 509
           +G+  D   Y  LI   C   ++  A  L N M   G+
Sbjct: 851 KGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGL 888



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 99/367 (26%), Positives = 174/367 (47%), Gaps = 2/367 (0%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           +FD+M    L P+    ++L++   +    D       +M+ +G+  +++ YN LI+  C
Sbjct: 389 LFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHC 448

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           K  D+   E L+ EM  K +   + TY +L+  YC KG   +AL +   M  +GI P I 
Sbjct: 449 KFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIY 508

Query: 272 TYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           T+ +L+ G  R G +R+A +LF ++      PN VTY  +I+GYC   ++ +A      M
Sbjct: 509 TFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEM 568

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
             KG+ P   +Y  ++  LC  G+  +A   ++ +++     + +    L++ +C+ G  
Sbjct: 569 IEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKL 628

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
             A+ V   M   G+ LD   Y  LI G  K K+  +   LL  M D G  P    Y+ +
Sbjct: 629 EEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSM 688

Query: 450 VDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGI 509
           +D      + +    + D  ++ G   +   Y A+I   CK   V+ A+ L + M+    
Sbjct: 689 IDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEILCSKMRPGNS 748

Query: 510 LGDSVIY 516
           + + V Y
Sbjct: 749 VPNQVTY 755



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 89/277 (32%), Positives = 139/277 (50%), Gaps = 4/277 (1%)

Query: 169 TVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEF 228
           T LL+   ++   +    V + M   GV  ++  Y VLI    K  D      LL EM  
Sbjct: 616 TGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHD 675

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
           + ++ D   Y ++I    K G   EA  + D M  EG  P+ VTY ++I+G C+ G + E
Sbjct: 676 RGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNE 735

Query: 289 ARRLFRDIK--GATPNHVTYTTLIDGYCRA-NDLEEALRLREVMAAKGVYPGVVTYNSIL 345
           A  L   ++   + PN VTY   +D   +   D+++A+ L   +  KG+     TYN ++
Sbjct: 736 AEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAIL-KGLLANTATYNMLI 794

Query: 346 RKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLM 405
           R  C++GR+ +A+ L+  M    ++PD +T  T+I+  C+  D   A+++ N M E G+ 
Sbjct: 795 RGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSMTEKGIR 854

Query: 406 LDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
            D+  Y  LIHG C A EM  A EL   ML  G  P+
Sbjct: 855 PDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLKPN 891


>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
 gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
          Length = 616

 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 149/550 (27%), Positives = 249/550 (45%), Gaps = 62/550 (11%)

Query: 57  PSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKH-FKSAQNMLEKIALRDFLSTPSV 115
           P L+  FF WA      YKH + S+  ++ IL K+ H F++ +        +D L +   
Sbjct: 7   PDLAIQFFDWAGEQ-DGYKHDVHSYNHLLDILVKSGHHFRTGK------VYKDLLHSGCS 59

Query: 116 LNALVKIHDDPDGNSHVLSWLVIFYANLKMTQD--GLQVFDQMRVHNLMPHLHACTVLLN 173
            N              ++++ ++   N K  Q    L+    +   ++ P ++   VL++
Sbjct: 60  PN--------------LVTFKILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIH 105

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
            L KD   D   K+++ M    V   I  YN +I   CKS +++K  +LL EM  K  ++
Sbjct: 106 GLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKS 165

Query: 234 --DLFTYNTLI-ALY----------------------------------CKKGMHYEALA 256
             D+ TYNTLI A Y                                  CK G   EAL 
Sbjct: 166 APDIVTYNTLINAFYRASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALE 225

Query: 257 VQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRA 316
           + D M+  G  PD++TYNS+IH  C  G++ EA  + + +   +P+ VT+ TL+DG+C+A
Sbjct: 226 ILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEILKTMS-CSPDLVTFNTLLDGFCKA 284

Query: 317 NDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTC 376
             L  AL + E M  + + P V+TY  ++  LC+ G+++ A  LL E+  +   PD +  
Sbjct: 285 GMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAY 344

Query: 377 NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD 436
            +L++  CK G+   A K+   M   G       Y +L+ G+C+A  +  A+E+L  M+ 
Sbjct: 345 TSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVS 404

Query: 437 AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDY 496
               P   +Y+ ++ G     +    + L+ + V+RG   DV  Y  LI   CK  +V  
Sbjct: 405 INMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVRE 464

Query: 497 AQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSA 556
           A  L + M   G   + V   S+ +   R G       ++ +M R+R    + +Y S   
Sbjct: 465 ACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLID 524

Query: 557 SYAKDNEILD 566
              K + + D
Sbjct: 525 GLCKSDRMDD 534



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 135/493 (27%), Positives = 238/493 (48%), Gaps = 26/493 (5%)

Query: 57  PSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVL 116
           P  +   F+  ES+    K  + ++ T+I  L K+ + + A+ +LE++  +   S P ++
Sbjct: 113 PDQAVKLFENMESS--RVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIV 170

Query: 117 --NALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNS 174
             N L+                  FY   ++ ++     ++M+   + P +  C +L++ 
Sbjct: 171 TYNTLINA----------------FYRASRI-REACAFREKMKAAGINPDVLTCNILVSG 213

Query: 175 LAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRAD 234
           + KD   +   ++   M   G V ++  YN +IHA C +  V +  ++L  M       D
Sbjct: 214 ICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEILKTMS---CSPD 270

Query: 235 LFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR 294
           L T+NTL+  +CK GM   AL V + M RE I PD++TY  L++G CR G+++ A  L  
Sbjct: 271 LVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLE 330

Query: 295 DI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEG 352
           +I  +G  P+ + YT+L+DG C++ ++EEA +L + M+ +G   GVV Y+S++   C+ G
Sbjct: 331 EIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAG 390

Query: 353 RIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYK 412
            +  A  +L EM    + P   T N ++    K G  + A+ + + ++  G + D  TY 
Sbjct: 391 NVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYN 450

Query: 413 ALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSR 472
            LI G CKA  +  A +L   M   G  P+  +   +V G C     +    L+ E   +
Sbjct: 451 TLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRK 510

Query: 473 GLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKAC 532
               +V VY +LI   CK +++D A  + + M+G G+  D   Y  L  +    G     
Sbjct: 511 RHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLIVSMSHGGRVAEA 570

Query: 533 SDILDDMYRRRLM 545
             + D+M  R  +
Sbjct: 571 MAMYDEMVARGFL 583



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 71/274 (25%), Positives = 125/274 (45%), Gaps = 37/274 (13%)

Query: 146 TQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNV 205
            Q    + +++     +P + A T L++ L K    +   K+ K+M   G    + +Y+ 
Sbjct: 322 VQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSS 381

Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
           L+   C++ +V K  ++L EM   ++   LFTYN ++    K G   +A+++   +   G
Sbjct: 382 LVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARG 441

Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVT------------------ 305
             PD+VTYN+LI G C+  R+REA  L  ++  +G  PN VT                  
Sbjct: 442 YVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAW 501

Query: 306 -----------------YTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
                            YT+LIDG C+++ +++A  + + M  +GV      Y  ++  +
Sbjct: 502 SLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLIVSM 561

Query: 349 CKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
              GR+ +A  + +EM  +   PD  T  TL  A
Sbjct: 562 SHGGRVAEAMAMYDEMVARGFLPDGSTSKTLEEA 595


>gi|125524465|gb|EAY72579.1| hypothetical protein OsI_00445 [Oryza sativa Indica Group]
          Length = 1014

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 132/417 (31%), Positives = 215/417 (51%), Gaps = 9/417 (2%)

Query: 166 HACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCE 225
           +  + +L SL K R   +   ++ KM+Q GV  + ++Y   I A C+S ++D    L+  
Sbjct: 164 YTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVR 223

Query: 226 MEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGR 285
           ME + V+A    YN L+   CK     EA+ V++ M   G++ D VTY +L++GFCR   
Sbjct: 224 MESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEE 283

Query: 286 MREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNS 343
           +  A R+  D+   G  P+    + +ID   +   +EEA  L   +   G+ P V  YN+
Sbjct: 284 LEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNA 343

Query: 344 ILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAG 403
           ++ KLCK  R  DA+RL  EM  + + P+ VT   LI+A CK G    A+ + ++M + G
Sbjct: 344 LIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKG 403

Query: 404 LMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALL 463
           + +  + Y +LI+G+CK   +D A+ LL GM+  G +P+  SYS L+ G C   +  + +
Sbjct: 404 IKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAM 463

Query: 464 KLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAY 523
           +L  E   RG+  +   + ALI  FCK +K+D A RLF+ M  + ++ + V +  +   Y
Sbjct: 464 ELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGY 523

Query: 524 WRAGEPKACSDILDDMYRRRLMITLKIYRS------FSASYAKDNE-ILDLFWSHVV 573
              G  +    + D M    L      YRS       ++  +K NE + DL  S+ V
Sbjct: 524 CLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAV 580



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 133/487 (27%), Positives = 228/487 (46%), Gaps = 41/487 (8%)

Query: 138 IFYANLKMTQDGL--QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           I ++ +K+ Q  L   +FD+M    +    +  T  + +  + R  D    +  +M   G
Sbjct: 169 ILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEG 228

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYC--------- 246
           V A+   YNVL++  CK+  V +  ++   M    V AD  TY TL+  +C         
Sbjct: 229 VKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMAL 288

Query: 247 --------------------------KKGMHYEALAVQDRMEREGISPDIVTYNSLIHGF 280
                                     KK +  EA ++  ++   G+ P++  YN+LI   
Sbjct: 289 RITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKL 348

Query: 281 CREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGV 338
           C+  R  +A RLF+++  +G  PN VTY  LI   C+   +E+AL L + M  KG+   V
Sbjct: 349 CKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTV 408

Query: 339 VTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNR 398
             YNS++   CK+G +  A  LL+ M ++ + P   + + LI   C+ GD +SAM++   
Sbjct: 409 YPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAMELHRE 468

Query: 399 MLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNN 458
           M E G+  + +T+ ALI+GFCK K+MD A  L   M+D+   P+  +++ +++GYC   N
Sbjct: 469 MAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGN 528

Query: 459 EEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTS 518
                +L D+ V  GL  D   YR+LI   C    V  A      ++ +  + ++   T+
Sbjct: 529 IRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTA 588

Query: 519 LAYAYWRAGEPKACSDILDDMYRRRLMITLKIYR--SFSASYAKDNEILDLFWSHVVDRG 576
           L Y  +R G       + D+M  R + + L  +    ++A    D E   + +  + ++G
Sbjct: 589 LLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQG 648

Query: 577 LMSKHIF 583
           +    IF
Sbjct: 649 VKPDDIF 655



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 107/407 (26%), Positives = 195/407 (47%), Gaps = 2/407 (0%)

Query: 160 NLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKV 219
            ++P++ A   L++ L K+   D   +++K+M   G+  N   Y +LIHA CK   ++  
Sbjct: 333 GMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDA 392

Query: 220 EKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHG 279
             L  +M  K ++  ++ YN+LI  YCK+G    A  +   M +EG++P   +Y+ LI G
Sbjct: 393 LCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAG 452

Query: 280 FCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPG 337
            CR G +  A  L R++  +G   N+ T+T LI+G+C+   ++EA RL + M    V P 
Sbjct: 453 LCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPN 512

Query: 338 VVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKN 397
            VT+N ++   C  G IR A +L ++M E  + PDN T  +LI+  C     + A +   
Sbjct: 513 EVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVA 572

Query: 398 RMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKN 457
            +  +  +L+ F+  AL++G  +         L   M   G      S++ +V     ++
Sbjct: 573 DLENSYAVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQH 632

Query: 458 NEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYT 517
           ++E    L  E   +G+  D   Y  +I    K+E +  A   ++ M  +G   ++V +T
Sbjct: 633 DKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVIDGYSPNTVTHT 692

Query: 518 SLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
            L     ++G   +   +  +M    ++     Y  F   +A + ++
Sbjct: 693 VLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDM 739



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 100/424 (23%), Positives = 185/424 (43%), Gaps = 4/424 (0%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D  ++F +M    L P+     +L+++L K  + +    ++ KM   G+   ++ YN LI
Sbjct: 356 DADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLI 415

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           +  CK   +D+   LL  M  + +     +Y+ LIA  C+ G    A+ +   M   GI+
Sbjct: 416 NGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAMELHREMAERGIA 475

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
            +  T+ +LI+GFC++ +M EA RLF  +      PN VT+  +I+GYC   ++ +A +L
Sbjct: 476 WNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQL 535

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
            + M   G+ P   TY S++  LC    +  AN  + ++       +N +   L+    +
Sbjct: 536 YDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGLFR 595

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            G       + + M   G+ LD  ++  +++   K  + + +  L   M + G  P    
Sbjct: 596 EGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIF 655

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+ ++D    + N    L   D+ V  G   +   +  LI   CK   +  A+ L   M 
Sbjct: 656 YTCMIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEML 715

Query: 506 GNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL--MITLKIYRSFSASYAKDNE 563
              +L +   Y      +   G+ +   D+   M +  L  +++  I         K  E
Sbjct: 716 AGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKIQE 775

Query: 564 ILDL 567
            +DL
Sbjct: 776 AIDL 779



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 95/393 (24%), Positives = 186/393 (47%), Gaps = 3/393 (0%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N++  + L+  +   K   +  ++FD+M   N++P+     V++            +++Y
Sbjct: 477 NNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLY 536

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
            +MV++G+  + + Y  LI   C +S V K  + + ++E      + F+   L+    ++
Sbjct: 537 DQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGLFRE 596

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTY 306
           G   E   + D M   G+  D+V++  +++   ++    ++  LFR++K  G  P+ + Y
Sbjct: 597 GRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFY 656

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
           T +ID   +  ++ +AL   + M   G  P  VT+  ++  LCK G +  A  L  EM  
Sbjct: 657 TCMIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLA 716

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
             + P+  T N  ++ +   GD   A  + + ML+ G +    ++  LI G CKA ++  
Sbjct: 717 GNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQ-GHLASIVSFNILIKGLCKAGKIQE 775

Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
           A +L+  + ++GFSP   SYS ++   C   +     +L +E + +GL  DV  Y   IR
Sbjct: 776 AIDLMRKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIR 835

Query: 487 RFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
                 + D A  ++  M  +G+  +   Y +L
Sbjct: 836 WCNVHGESDKALGIYTNMIRSGVQPNWDTYRAL 868



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 81/286 (28%), Positives = 144/286 (50%), Gaps = 3/286 (1%)

Query: 169 TVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEF 228
           T LL  L ++      + ++ +M   GV  ++  + ++++A  K  D +K   L  EM+ 
Sbjct: 587 TALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKE 646

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
           + V+ D   Y  +I    K+    +AL   D+M  +G SP+ VT+  LI+  C+ G +  
Sbjct: 647 QGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNLCKSGYLGS 706

Query: 289 ARRLFRDIKGAT--PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILR 346
           A  L +++      PN  TY   +D +    D+E+A  L   M  +G    +V++N +++
Sbjct: 707 AELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAML-QGHLASIVSFNILIK 765

Query: 347 KLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLML 406
            LCK G+I++A  L+ ++ E   +PD ++ +T+I+  CK+GD   A ++ N ML  GL  
Sbjct: 766 GLCKAGKIQEAIDLMRKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKP 825

Query: 407 DQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
           D   Y   I       E D A  +   M+ +G  P++ +Y  L+ G
Sbjct: 826 DVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSG 871


>gi|125569067|gb|EAZ10582.1| hypothetical protein OsJ_00414 [Oryza sativa Japonica Group]
          Length = 1003

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 132/417 (31%), Positives = 215/417 (51%), Gaps = 9/417 (2%)

Query: 166 HACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCE 225
           +  + +L SL K R   +   ++ KM+Q GV  + ++Y   I A C+S ++D    L+  
Sbjct: 164 YTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVR 223

Query: 226 MEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGR 285
           ME + V+A    YN L+   CK     EA+ V++ M   G++ D VTY +L++GFCR   
Sbjct: 224 MESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEE 283

Query: 286 MREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNS 343
           +  A R+  D+   G  P+    + +ID   +   +EEA  L   +   G+ P V  YN+
Sbjct: 284 LEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNA 343

Query: 344 ILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAG 403
           ++ KLCK  R  DA+RL  EM  + + P+ VT   LI+A CK G    A+ + ++M + G
Sbjct: 344 LIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKG 403

Query: 404 LMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALL 463
           + +  + Y +LI+G+CK   +D A+ LL GM+  G +P+  SYS L+ G C   +  + +
Sbjct: 404 IKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCM 463

Query: 464 KLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAY 523
           +L  E   RG+  +   + ALI  FCK +K+D A RLF+ M  + ++ + V +  +   Y
Sbjct: 464 ELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGY 523

Query: 524 WRAGEPKACSDILDDMYRRRLMITLKIYRS------FSASYAKDNE-ILDLFWSHVV 573
              G  +    + D M    L      YRS       ++  +K NE + DL  S+ V
Sbjct: 524 CLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAV 580



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 132/487 (27%), Positives = 228/487 (46%), Gaps = 41/487 (8%)

Query: 138 IFYANLKMTQDGL--QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           I ++ +K+ Q  L   +FD+M    +    +  T  + +  + R  D    +  +M   G
Sbjct: 169 ILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEG 228

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYC--------- 246
           V A+   YNVL++  CK+  V +  ++   M    V AD  TY TL+  +C         
Sbjct: 229 VKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMAL 288

Query: 247 --------------------------KKGMHYEALAVQDRMEREGISPDIVTYNSLIHGF 280
                                     KK +  EA ++  ++   G+ P++  YN+LI   
Sbjct: 289 RITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKL 348

Query: 281 CREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGV 338
           C+  R  +A RLF+++  +G  PN VTY  LI   C+   +E+AL L + M  KG+   V
Sbjct: 349 CKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTV 408

Query: 339 VTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNR 398
             YNS++   CK+G +  A  LL+ M ++ + P   + + LI   C+ GD +S M++   
Sbjct: 409 YPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHRE 468

Query: 399 MLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNN 458
           M E G+  + +T+ ALI+GFCK K+MD A  L   M+D+   P+  +++ +++GYC   N
Sbjct: 469 MAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGN 528

Query: 459 EEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTS 518
                +L D+ V  GL  D   YR+LI   C    V  A      ++ +  + ++   T+
Sbjct: 529 IRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTA 588

Query: 519 LAYAYWRAGEPKACSDILDDMYRRRLMITLKIYR--SFSASYAKDNEILDLFWSHVVDRG 576
           L Y ++R G       + D+M  R + + L  +    ++A    D E   + +  + ++G
Sbjct: 589 LLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQG 648

Query: 577 LMSKHIF 583
           +    IF
Sbjct: 649 VKPDDIF 655



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 107/407 (26%), Positives = 195/407 (47%), Gaps = 2/407 (0%)

Query: 160 NLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKV 219
            ++P++ A   L++ L K+   D   +++K+M   G+  N   Y +LIHA CK   ++  
Sbjct: 333 GMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDA 392

Query: 220 EKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHG 279
             L  +M  K ++  ++ YN+LI  YCK+G    A  +   M +EG++P   +Y+ LI G
Sbjct: 393 LCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAG 452

Query: 280 FCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPG 337
            CR G +     L R++  +G   N+ T+T LI+G+C+   ++EA RL + M    V P 
Sbjct: 453 LCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPN 512

Query: 338 VVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKN 397
            VT+N ++   C  G IR A +L ++M E  + PDN T  +LI+  C     + A +   
Sbjct: 513 EVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVA 572

Query: 398 RMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKN 457
            +  +  +L+ F+  AL++GF +         L   M   G      S++ +V     ++
Sbjct: 573 DLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQH 632

Query: 458 NEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYT 517
           ++E    L  E   +G+  D   Y  +I    K+E +  A   ++ M  +G   ++V +T
Sbjct: 633 DKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHT 692

Query: 518 SLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
            L     ++G   +   +  +M    ++     Y  F   +A + ++
Sbjct: 693 VLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDM 739



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 101/434 (23%), Positives = 189/434 (43%), Gaps = 5/434 (1%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D  ++F +M    L P+     +L+++L K  + +    ++ KM   G+   ++ YN LI
Sbjct: 356 DADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLI 415

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           +  CK   +D+   LL  M  + +     +Y+ LIA  C+ G     + +   M   GI+
Sbjct: 416 NGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIA 475

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
            +  T+ +LI+GFC++ +M EA RLF  +      PN VT+  +I+GYC   ++ +A +L
Sbjct: 476 WNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQL 535

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
            + M   G+ P   TY S++  LC    +  AN  + ++       +N +   L+  + +
Sbjct: 536 YDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFR 595

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            G       + + M   G+ LD  ++  +++   K  + + +  L   M + G  P    
Sbjct: 596 EGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIF 655

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+ ++D    + N    L   D+ V  G   +   +  LI   CK   +  A+ L   M 
Sbjct: 656 YTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEML 715

Query: 506 GNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL--MITLKIYRSFSASYAKDNE 563
              +L +   Y      +   G+ +   D+   M +  L  +++  I         K  E
Sbjct: 716 AGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKIQE 775

Query: 564 ILDLFWSHVVDRGL 577
            +DL  S + + G 
Sbjct: 776 AIDLM-SKITESGF 788



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 95/393 (24%), Positives = 187/393 (47%), Gaps = 3/393 (0%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N++  + L+  +   K   +  ++FD+M   N++P+     V++            +++Y
Sbjct: 477 NNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLY 536

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
            +MV++G+  + + Y  LI   C +S V K  + + ++E      + F+   L+  + ++
Sbjct: 537 DQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFRE 596

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTY 306
           G   E   + D M   G+  D+V++  +++   ++    ++  LFR++K  G  P+ + Y
Sbjct: 597 GRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFY 656

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
           T +ID   +  ++ +AL   + M   G  P  VT+  ++  LCK G +  A  L  EM  
Sbjct: 657 TCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLA 716

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
             + P+  T N  ++ +   GD   A  + + ML+ G +    ++  LI G CKA ++  
Sbjct: 717 GNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQ-GHLASIVSFNILIKGLCKAGKIQE 775

Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
           A +L+  + ++GFSP   SYS ++   C   +     +L +E + +GL  DV  Y   IR
Sbjct: 776 AIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIR 835

Query: 487 RFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
                 + D A  ++  M  +G+  +   Y +L
Sbjct: 836 WCNVHGESDKALGIYTNMIRSGVQPNWDTYRAL 868



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 80/286 (27%), Positives = 144/286 (50%), Gaps = 3/286 (1%)

Query: 169 TVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEF 228
           T LL    ++      + ++ +M   GV  ++  + ++++A  K  D +K   L  EM+ 
Sbjct: 587 TALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKE 646

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
           + V+ D   Y  +I    K+    +AL   D+M  +G SP+ VT+  LI+  C+ G +  
Sbjct: 647 QGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGS 706

Query: 289 ARRLFRDIKGAT--PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILR 346
           A  L +++      PN  TY   +D +    D+E+A  L   M  +G    +V++N +++
Sbjct: 707 AELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAML-QGHLASIVSFNILIK 765

Query: 347 KLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLML 406
            LCK G+I++A  L++++ E   +PD ++ +T+I+  CK+GD   A ++ N ML  GL  
Sbjct: 766 GLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKP 825

Query: 407 DQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
           D   Y   I       E D A  +   M+ +G  P++ +Y  L+ G
Sbjct: 826 DVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSG 871



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 76/291 (26%), Positives = 139/291 (47%), Gaps = 4/291 (1%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N  + + L  F+   + T+    ++D+M V  +   L + T+++ +  K    +    ++
Sbjct: 583 NFSLTALLYGFFREGRFTET-YHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLF 641

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
           ++M + GV  +   Y  +I A  K  ++ +      +M       +  T+  LI   CK 
Sbjct: 642 REMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKS 701

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD-IKGATPNHVTYT 307
           G    A  +   M    + P+  TYN  +  F  EG M +A+ L    ++G   + V++ 
Sbjct: 702 GYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFN 761

Query: 308 TLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEK 367
            LI G C+A  ++EA+ L   +   G  P  ++Y++I+ +LCK G I  A  L NEM  K
Sbjct: 762 ILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYK 821

Query: 368 KIAPDNVTCNTLINAYCKI-GDTASAMKVKNRMLEAGLMLDQFTYKALIHG 417
            + PD V  N  I  +C + G++  A+ +   M+ +G+  +  TY+AL+ G
Sbjct: 822 GLKPDVVAYNIFIR-WCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSG 871


>gi|13872949|dbj|BAB44054.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 909

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 132/417 (31%), Positives = 215/417 (51%), Gaps = 9/417 (2%)

Query: 166 HACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCE 225
           +  + +L SL K R   +   ++ KM+Q GV  + ++Y   I A C+S ++D    L+  
Sbjct: 187 YTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVR 246

Query: 226 MEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGR 285
           ME + V+A    YN L+   CK     EA+ V++ M   G++ D VTY +L++GFCR   
Sbjct: 247 MESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEE 306

Query: 286 MREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNS 343
           +  A R+  D+   G  P+    + +ID   +   +EEA  L   +   G+ P V  YN+
Sbjct: 307 LEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNA 366

Query: 344 ILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAG 403
           ++ KLCK  R  DA+RL  EM  + + P+ VT   LI+A CK G    A+ + ++M + G
Sbjct: 367 LIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKG 426

Query: 404 LMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALL 463
           + +  + Y +LI+G+CK   +D A+ LL GM+  G +P+  SYS L+ G C   +  + +
Sbjct: 427 IKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCM 486

Query: 464 KLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAY 523
           +L  E   RG+  +   + ALI  FCK +K+D A RLF+ M  + ++ + V +  +   Y
Sbjct: 487 ELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGY 546

Query: 524 WRAGEPKACSDILDDMYRRRLMITLKIYRS------FSASYAKDNE-ILDLFWSHVV 573
              G  +    + D M    L      YRS       ++  +K NE + DL  S+ V
Sbjct: 547 CLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAV 603



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 132/487 (27%), Positives = 228/487 (46%), Gaps = 41/487 (8%)

Query: 138 IFYANLKMTQDGL--QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           I ++ +K+ Q  L   +FD+M    +    +  T  + +  + R  D    +  +M   G
Sbjct: 192 ILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEG 251

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYC--------- 246
           V A+   YNVL++  CK+  V +  ++   M    V AD  TY TL+  +C         
Sbjct: 252 VKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMAL 311

Query: 247 --------------------------KKGMHYEALAVQDRMEREGISPDIVTYNSLIHGF 280
                                     KK +  EA ++  ++   G+ P++  YN+LI   
Sbjct: 312 RITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKL 371

Query: 281 CREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGV 338
           C+  R  +A RLF+++  +G  PN VTY  LI   C+   +E+AL L + M  KG+   V
Sbjct: 372 CKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTV 431

Query: 339 VTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNR 398
             YNS++   CK+G +  A  LL+ M ++ + P   + + LI   C+ GD +S M++   
Sbjct: 432 YPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHRE 491

Query: 399 MLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNN 458
           M E G+  + +T+ ALI+GFCK K+MD A  L   M+D+   P+  +++ +++GYC   N
Sbjct: 492 MAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGN 551

Query: 459 EEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTS 518
                +L D+ V  GL  D   YR+LI   C    V  A      ++ +  + ++   T+
Sbjct: 552 IRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTA 611

Query: 519 LAYAYWRAGEPKACSDILDDMYRRRLMITLKIYR--SFSASYAKDNEILDLFWSHVVDRG 576
           L Y ++R G       + D+M  R + + L  +    ++A    D E   + +  + ++G
Sbjct: 612 LLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQG 671

Query: 577 LMSKHIF 583
           +    IF
Sbjct: 672 VKPDDIF 678



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 107/407 (26%), Positives = 195/407 (47%), Gaps = 2/407 (0%)

Query: 160 NLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKV 219
            ++P++ A   L++ L K+   D   +++K+M   G+  N   Y +LIHA CK   ++  
Sbjct: 356 GMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDA 415

Query: 220 EKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHG 279
             L  +M  K ++  ++ YN+LI  YCK+G    A  +   M +EG++P   +Y+ LI G
Sbjct: 416 LCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAG 475

Query: 280 FCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPG 337
            CR G +     L R++  +G   N+ T+T LI+G+C+   ++EA RL + M    V P 
Sbjct: 476 LCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPN 535

Query: 338 VVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKN 397
            VT+N ++   C  G IR A +L ++M E  + PDN T  +LI+  C     + A +   
Sbjct: 536 EVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVA 595

Query: 398 RMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKN 457
            +  +  +L+ F+  AL++GF +         L   M   G      S++ +V     ++
Sbjct: 596 DLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQH 655

Query: 458 NEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYT 517
           ++E    L  E   +G+  D   Y  +I    K+E +  A   ++ M  +G   ++V +T
Sbjct: 656 DKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHT 715

Query: 518 SLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
            L     ++G   +   +  +M    ++     Y  F   +A + ++
Sbjct: 716 VLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDM 762



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 101/434 (23%), Positives = 189/434 (43%), Gaps = 5/434 (1%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D  ++F +M    L P+     +L+++L K  + +    ++ KM   G+   ++ YN LI
Sbjct: 379 DADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLI 438

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           +  CK   +D+   LL  M  + +     +Y+ LIA  C+ G     + +   M   GI+
Sbjct: 439 NGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIA 498

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
            +  T+ +LI+GFC++ +M EA RLF  +      PN VT+  +I+GYC   ++ +A +L
Sbjct: 499 WNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQL 558

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
            + M   G+ P   TY S++  LC    +  AN  + ++       +N +   L+  + +
Sbjct: 559 YDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFR 618

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            G       + + M   G+ LD  ++  +++   K  + + +  L   M + G  P    
Sbjct: 619 EGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIF 678

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+ ++D    + N    L   D+ V  G   +   +  LI   CK   +  A+ L   M 
Sbjct: 679 YTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEML 738

Query: 506 GNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL--MITLKIYRSFSASYAKDNE 563
              +L +   Y      +   G+ +   D+   M +  L  +++  I         K  E
Sbjct: 739 AGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKIQE 798

Query: 564 ILDLFWSHVVDRGL 577
            +DL  S + + G 
Sbjct: 799 AIDLM-SKITESGF 811



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 95/393 (24%), Positives = 187/393 (47%), Gaps = 3/393 (0%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N++  + L+  +   K   +  ++FD+M   N++P+     V++            +++Y
Sbjct: 500 NNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLY 559

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
            +MV++G+  + + Y  LI   C +S V K  + + ++E      + F+   L+  + ++
Sbjct: 560 DQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFRE 619

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTY 306
           G   E   + D M   G+  D+V++  +++   ++    ++  LFR++K  G  P+ + Y
Sbjct: 620 GRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFY 679

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
           T +ID   +  ++ +AL   + M   G  P  VT+  ++  LCK G +  A  L  EM  
Sbjct: 680 TCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLA 739

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
             + P+  T N  ++ +   GD   A  + + ML+ G +    ++  LI G CKA ++  
Sbjct: 740 GNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQ-GHLASIVSFNILIKGLCKAGKIQE 798

Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
           A +L+  + ++GFSP   SYS ++   C   +     +L +E + +GL  DV  Y   IR
Sbjct: 799 AIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIR 858

Query: 487 RFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
                 + D A  ++  M  +G+  +   Y +L
Sbjct: 859 WCNVHGESDKALGIYTNMIRSGVQPNWDTYRAL 891



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 80/286 (27%), Positives = 144/286 (50%), Gaps = 3/286 (1%)

Query: 169 TVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEF 228
           T LL    ++      + ++ +M   GV  ++  + ++++A  K  D +K   L  EM+ 
Sbjct: 610 TALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKE 669

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
           + V+ D   Y  +I    K+    +AL   D+M  +G SP+ VT+  LI+  C+ G +  
Sbjct: 670 QGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGS 729

Query: 289 ARRLFRDIKGAT--PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILR 346
           A  L +++      PN  TY   +D +    D+E+A  L   M  +G    +V++N +++
Sbjct: 730 AELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAML-QGHLASIVSFNILIK 788

Query: 347 KLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLML 406
            LCK G+I++A  L++++ E   +PD ++ +T+I+  CK+GD   A ++ N ML  GL  
Sbjct: 789 GLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKP 848

Query: 407 DQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
           D   Y   I       E D A  +   M+ +G  P++ +Y  L+ G
Sbjct: 849 DVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSG 894



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 78/293 (26%), Positives = 142/293 (48%), Gaps = 8/293 (2%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N  + + L  F+   + T+    ++D+M V  +   L + T+++ +  K    +    ++
Sbjct: 606 NFSLTALLYGFFREGRFTET-YHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLF 664

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLC--EMEFKDVRADLFTYNTLIALYC 246
           ++M + GV  +   Y  +I A  K  ++  ++ L C  +M       +  T+  LI   C
Sbjct: 665 REMKEQGVKPDDIFYTCMIDALSKEENM--IQALNCWDQMVVDGYSPNTVTHTVLINNLC 722

Query: 247 KKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD-IKGATPNHVT 305
           K G    A  +   M    + P+  TYN  +  F  EG M +A+ L    ++G   + V+
Sbjct: 723 KSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVS 782

Query: 306 YTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMN 365
           +  LI G C+A  ++EA+ L   +   G  P  ++Y++I+ +LCK G I  A  L NEM 
Sbjct: 783 FNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEML 842

Query: 366 EKKIAPDNVTCNTLINAYCKI-GDTASAMKVKNRMLEAGLMLDQFTYKALIHG 417
            K + PD V  N  I  +C + G++  A+ +   M+ +G+  +  TY+AL+ G
Sbjct: 843 YKGLKPDVVAYNIFIR-WCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSG 894


>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 621

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 132/419 (31%), Positives = 207/419 (49%), Gaps = 2/419 (0%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           L+V  +M+     P+L     L++ L K    D   ++  +M   G V ++  YN LI  
Sbjct: 64  LEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLIST 123

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
             K+  + +   L  EM  +    D FTYN+LI    K G   +A+ + + MER G  PD
Sbjct: 124 LGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPD 183

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLRE 327
           ++TY+SLI G  ++G   +A +LF+++K  G  P+ +T+T L+D   +A  +++AL L +
Sbjct: 184 VMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLD 243

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
            M  +GV PGVVTYN+++    K G + +A  LL+EM      PD VT + LI    K  
Sbjct: 244 EMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKAS 303

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
               A +V  +M + G   D  TY  LI+G  KA  ++ A  L   M   G +P   +YS
Sbjct: 304 QLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYS 363

Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGN 507
            L+         E+   L +E  S G+  D+  Y ++I    K  +VD A RLF+ M+G 
Sbjct: 364 TLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGK 423

Query: 508 GILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
           G+  D + Y +   +  R G  K    I +DM    L+  +  Y +     +K  E+ D
Sbjct: 424 GLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDD 482



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 136/427 (31%), Positives = 217/427 (50%), Gaps = 9/427 (2%)

Query: 137 VIFYANL--KMTQDG-----LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYK 189
           V+ Y++L   + +DG      ++F +M+     P     T L+++L K    D   ++  
Sbjct: 184 VMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLD 243

Query: 190 KMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKG 249
           +M + GV   +  YN LI    K  D+ +   LL EM+    + D+ TY+ LI    K  
Sbjct: 244 EMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKAS 303

Query: 250 MHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYT 307
              EA  V  +ME+EG  PD +TYN+LI+G  + G + +A RLF  +K  G  P+ VTY+
Sbjct: 304 QLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYS 363

Query: 308 TLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEK 367
           TLI    +A  +E A  L E M + G+ P + TY SI+  L K G++ DA+RL +EM  K
Sbjct: 364 TLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGK 423

Query: 368 KIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIA 427
            ++PD +T N  +N+  + G    A K+   M E+GL+ D  TY AL+ G  K KE+D A
Sbjct: 424 GLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDA 483

Query: 428 KELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRR 487
             LL  +++ G +     +   ++   +  N +   +LL    S+GL    S Y ALI  
Sbjct: 484 CGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDA 543

Query: 488 FCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMIT 547
             K  +V  A      ++  G   D V Y+SL  A  + G+     ++L++M +R L ++
Sbjct: 544 LAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFELLEEMSKRGLKLS 603

Query: 548 LKIYRSF 554
            + Y + 
Sbjct: 604 PRSYSNL 610



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 97/277 (35%), Positives = 139/277 (50%), Gaps = 2/277 (0%)

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDIKGA--TPNHVTYTTLIDGYCRANDLEEALR 324
           SP++VTYNSL++   + G+  EA+ LF ++K A  TP+ V+Y+ LI+   RA   E AL 
Sbjct: 6   SPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALE 65

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           +   M AKG  P + TYN+++  L K G+  +A RLL EM +    PD  T N LI+   
Sbjct: 66  VVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLG 125

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           K G  + A  +   M E G + D FTY +LI+G  K      A ELL  M   G  P   
Sbjct: 126 KAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVM 185

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
           +YS L+ G           KL  E   RG   D   + AL+    K  +VD A  L + M
Sbjct: 186 TYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEM 245

Query: 505 QGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
           +  G+    V Y +L   + + G+     ++LD+M R
Sbjct: 246 KERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKR 282



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 98/347 (28%), Positives = 168/347 (48%), Gaps = 8/347 (2%)

Query: 108 DFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQ--DGLQVFDQMRVHNLMPHL 165
           D +   ++L+ + +    PD    V+++  +    +K +Q  +  QV  +M      P  
Sbjct: 269 DLVEAYNLLDEMKRNGCKPD----VVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDT 324

Query: 166 HACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCE 225
                L+N L K  L +   +++ +M   G   ++  Y+ LI A  K++ V+    L  E
Sbjct: 325 ITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEE 384

Query: 226 MEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGR 285
           ME   ++ DLFTY ++I +  K G   +A  +   M  +G+SPD++TYN+ ++   R GR
Sbjct: 385 MESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGR 444

Query: 286 MREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNS 343
            +EAR++F D+K  G  P+  TY  L+ G  +  ++++A  L + +  +G     + ++ 
Sbjct: 445 FKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDE 504

Query: 344 ILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAG 403
            L  L   G + +A+ LL   N K + P   + N LI+A  K G  + A      + E G
Sbjct: 505 CLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQG 564

Query: 404 LMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLV 450
              D  +Y +LI    +  ++D A ELL  M   G   S  SYS LV
Sbjct: 565 GKPDIVSYSSLISALGQTGQIDTAFELLEEMSKRGLKLSPRSYSNLV 611



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 96/339 (28%), Positives = 157/339 (46%), Gaps = 2/339 (0%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           + D+M+ +   P +   + L+  L K    D   +V KKM + G   +   YN LI+   
Sbjct: 276 LLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLG 335

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           K+  ++   +L   M+ K    D+ TY+TLI    K      A  + + ME  GI PD+ 
Sbjct: 336 KAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLF 395

Query: 272 TYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           TY S+I    + G++ +A RLF ++  KG +P+ +TY   ++   R    +EA ++ E M
Sbjct: 396 TYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDM 455

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
              G+ P V TY+++L  L K   + DA  LL E+ E+  A D++  +  +      G+ 
Sbjct: 456 KESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNV 515

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
             A ++       GL     +Y ALI    KA  +  A   L  + + G  P   SYS L
Sbjct: 516 DEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSL 575

Query: 450 VDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRF 488
           +         +   +LL+E   RGL +    Y  L+R+ 
Sbjct: 576 ISALGQTGQIDTAFELLEEMSKRGLKLSPRSYSNLVRKL 614



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 77/269 (28%), Positives = 128/269 (47%)

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
           +PN VTY +L++   +A   EEA  L E + A    P VV+Y+ ++  L + G+   A  
Sbjct: 6   SPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALE 65

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
           ++ EM  K   P+  T NTL++   K G    A+++   M + G + D  TY  LI    
Sbjct: 66  VVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLG 125

Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
           KA  +  A  L   M + G  P   +Y+ L+ G       +  ++LL+E    G   DV 
Sbjct: 126 KAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVM 185

Query: 480 VYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
            Y +LI    K  +   A +LF  M+  G   DS+ +T+L  A  +AG      ++LD+M
Sbjct: 186 TYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEM 245

Query: 540 YRRRLMITLKIYRSFSASYAKDNEILDLF 568
             R +   +  Y +  A + K  ++++ +
Sbjct: 246 KERGVKPGVVTYNALIAGFGKVGDLVEAY 274


>gi|115434588|ref|NP_001042052.1| Os01g0153200 [Oryza sativa Japonica Group]
 gi|113531583|dbj|BAF03966.1| Os01g0153200 [Oryza sativa Japonica Group]
          Length = 1139

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 132/417 (31%), Positives = 215/417 (51%), Gaps = 9/417 (2%)

Query: 166 HACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCE 225
           +  + +L SL K R   +   ++ KM+Q GV  + ++Y   I A C+S ++D    L+  
Sbjct: 164 YTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVR 223

Query: 226 MEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGR 285
           ME + V+A    YN L+   CK     EA+ V++ M   G++ D VTY +L++GFCR   
Sbjct: 224 MESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEE 283

Query: 286 MREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNS 343
           +  A R+  D+   G  P+    + +ID   +   +EEA  L   +   G+ P V  YN+
Sbjct: 284 LEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNA 343

Query: 344 ILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAG 403
           ++ KLCK  R  DA+RL  EM  + + P+ VT   LI+A CK G    A+ + ++M + G
Sbjct: 344 LIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKG 403

Query: 404 LMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALL 463
           + +  + Y +LI+G+CK   +D A+ LL GM+  G +P+  SYS L+ G C   +  + +
Sbjct: 404 IKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCM 463

Query: 464 KLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAY 523
           +L  E   RG+  +   + ALI  FCK +K+D A RLF+ M  + ++ + V +  +   Y
Sbjct: 464 ELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGY 523

Query: 524 WRAGEPKACSDILDDMYRRRLMITLKIYRS------FSASYAKDNE-ILDLFWSHVV 573
              G  +    + D M    L      YRS       ++  +K NE + DL  S+ V
Sbjct: 524 CLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAV 580



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 132/487 (27%), Positives = 228/487 (46%), Gaps = 41/487 (8%)

Query: 138 IFYANLKMTQDGL--QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           I ++ +K+ Q  L   +FD+M    +    +  T  + +  + R  D    +  +M   G
Sbjct: 169 ILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEG 228

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYC--------- 246
           V A+   YNVL++  CK+  V +  ++   M    V AD  TY TL+  +C         
Sbjct: 229 VKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMAL 288

Query: 247 --------------------------KKGMHYEALAVQDRMEREGISPDIVTYNSLIHGF 280
                                     KK +  EA ++  ++   G+ P++  YN+LI   
Sbjct: 289 RITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKL 348

Query: 281 CREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGV 338
           C+  R  +A RLF+++  +G  PN VTY  LI   C+   +E+AL L + M  KG+   V
Sbjct: 349 CKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTV 408

Query: 339 VTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNR 398
             YNS++   CK+G +  A  LL+ M ++ + P   + + LI   C+ GD +S M++   
Sbjct: 409 YPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHRE 468

Query: 399 MLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNN 458
           M E G+  + +T+ ALI+GFCK K+MD A  L   M+D+   P+  +++ +++GYC   N
Sbjct: 469 MAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGN 528

Query: 459 EEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTS 518
                +L D+ V  GL  D   YR+LI   C    V  A      ++ +  + ++   T+
Sbjct: 529 IRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTA 588

Query: 519 LAYAYWRAGEPKACSDILDDMYRRRLMITLKIYR--SFSASYAKDNEILDLFWSHVVDRG 576
           L Y ++R G       + D+M  R + + L  +    ++A    D E   + +  + ++G
Sbjct: 589 LLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQG 648

Query: 577 LMSKHIF 583
           +    IF
Sbjct: 649 VKPDDIF 655



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 107/407 (26%), Positives = 195/407 (47%), Gaps = 2/407 (0%)

Query: 160 NLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKV 219
            ++P++ A   L++ L K+   D   +++K+M   G+  N   Y +LIHA CK   ++  
Sbjct: 333 GMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDA 392

Query: 220 EKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHG 279
             L  +M  K ++  ++ YN+LI  YCK+G    A  +   M +EG++P   +Y+ LI G
Sbjct: 393 LCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAG 452

Query: 280 FCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPG 337
            CR G +     L R++  +G   N+ T+T LI+G+C+   ++EA RL + M    V P 
Sbjct: 453 LCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPN 512

Query: 338 VVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKN 397
            VT+N ++   C  G IR A +L ++M E  + PDN T  +LI+  C     + A +   
Sbjct: 513 EVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVA 572

Query: 398 RMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKN 457
            +  +  +L+ F+  AL++GF +         L   M   G      S++ +V     ++
Sbjct: 573 DLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQH 632

Query: 458 NEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYT 517
           ++E    L  E   +G+  D   Y  +I    K+E +  A   ++ M  +G   ++V +T
Sbjct: 633 DKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHT 692

Query: 518 SLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
            L     ++G   +   +  +M    ++     Y  F   +A + ++
Sbjct: 693 VLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDM 739



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 101/434 (23%), Positives = 189/434 (43%), Gaps = 5/434 (1%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D  ++F +M    L P+     +L+++L K  + +    ++ KM   G+   ++ YN LI
Sbjct: 356 DADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLI 415

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           +  CK   +D+   LL  M  + +     +Y+ LIA  C+ G     + +   M   GI+
Sbjct: 416 NGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIA 475

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
            +  T+ +LI+GFC++ +M EA RLF  +      PN VT+  +I+GYC   ++ +A +L
Sbjct: 476 WNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQL 535

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
            + M   G+ P   TY S++  LC    +  AN  + ++       +N +   L+  + +
Sbjct: 536 YDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFR 595

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            G       + + M   G+ LD  ++  +++   K  + + +  L   M + G  P    
Sbjct: 596 EGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIF 655

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+ ++D    + N    L   D+ V  G   +   +  LI   CK   +  A+ L   M 
Sbjct: 656 YTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEML 715

Query: 506 GNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL--MITLKIYRSFSASYAKDNE 563
              +L +   Y      +   G+ +   D+   M +  L  +++  I         K  E
Sbjct: 716 AGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKIQE 775

Query: 564 ILDLFWSHVVDRGL 577
            +DL  S + + G 
Sbjct: 776 AIDLM-SKITESGF 788



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 95/393 (24%), Positives = 187/393 (47%), Gaps = 3/393 (0%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N++  + L+  +   K   +  ++FD+M   N++P+     V++            +++Y
Sbjct: 477 NNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLY 536

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
            +MV++G+  + + Y  LI   C +S V K  + + ++E      + F+   L+  + ++
Sbjct: 537 DQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFRE 596

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTY 306
           G   E   + D M   G+  D+V++  +++   ++    ++  LFR++K  G  P+ + Y
Sbjct: 597 GRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFY 656

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
           T +ID   +  ++ +AL   + M   G  P  VT+  ++  LCK G +  A  L  EM  
Sbjct: 657 TCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLA 716

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
             + P+  T N  ++ +   GD   A  + + ML+ G +    ++  LI G CKA ++  
Sbjct: 717 GNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQ-GHLASIVSFNILIKGLCKAGKIQE 775

Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
           A +L+  + ++GFSP   SYS ++   C   +     +L +E + +GL  DV  Y   IR
Sbjct: 776 AIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIR 835

Query: 487 RFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
                 + D A  ++  M  +G+  +   Y +L
Sbjct: 836 WCNVHGESDKALGIYTNMIRSGVQPNWDTYRAL 868



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 80/286 (27%), Positives = 144/286 (50%), Gaps = 3/286 (1%)

Query: 169 TVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEF 228
           T LL    ++      + ++ +M   GV  ++  + ++++A  K  D +K   L  EM+ 
Sbjct: 587 TALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKE 646

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
           + V+ D   Y  +I    K+    +AL   D+M  +G SP+ VT+  LI+  C+ G +  
Sbjct: 647 QGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGS 706

Query: 289 ARRLFRDIKGAT--PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILR 346
           A  L +++      PN  TY   +D +    D+E+A  L   M  +G    +V++N +++
Sbjct: 707 AELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAML-QGHLASIVSFNILIK 765

Query: 347 KLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLML 406
            LCK G+I++A  L++++ E   +PD ++ +T+I+  CK+GD   A ++ N ML  GL  
Sbjct: 766 GLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKP 825

Query: 407 DQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
           D   Y   I       E D A  +   M+ +G  P++ +Y  L+ G
Sbjct: 826 DVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSG 871



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 76/291 (26%), Positives = 139/291 (47%), Gaps = 4/291 (1%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N  + + L  F+   + T+    ++D+M V  +   L + T+++ +  K    +    ++
Sbjct: 583 NFSLTALLYGFFREGRFTET-YHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLF 641

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
           ++M + GV  +   Y  +I A  K  ++ +      +M       +  T+  LI   CK 
Sbjct: 642 REMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKS 701

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD-IKGATPNHVTYT 307
           G    A  +   M    + P+  TYN  +  F  EG M +A+ L    ++G   + V++ 
Sbjct: 702 GYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFN 761

Query: 308 TLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEK 367
            LI G C+A  ++EA+ L   +   G  P  ++Y++I+ +LCK G I  A  L NEM  K
Sbjct: 762 ILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYK 821

Query: 368 KIAPDNVTCNTLINAYCKI-GDTASAMKVKNRMLEAGLMLDQFTYKALIHG 417
            + PD V  N  I  +C + G++  A+ +   M+ +G+  +  TY+AL+ G
Sbjct: 822 GLKPDVVAYNIFIR-WCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSG 871


>gi|147819071|emb|CAN69810.1| hypothetical protein VITISV_043106 [Vitis vinifera]
          Length = 847

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 139/449 (30%), Positives = 216/449 (48%), Gaps = 41/449 (9%)

Query: 57  PSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVL 116
           P ++   F+WAES  P ++ S      ++ IL +N   +SA  ++E++   +      ++
Sbjct: 401 PRMALRLFRWAESQ-PGFRRSEFVFCAILEILAQNNLMRSAYWVMERVINANM---HRIV 456

Query: 117 NALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLA 176
           + L+      + +  +L  L+  Y+   M +  L VFD+M    L P +  C  +L  L 
Sbjct: 457 DVLIGGCVSSEVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILR 516

Query: 177 KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEM---------- 226
              L     +VY+ M + G+   I  YN L+ + CK   V +   LL EM          
Sbjct: 517 DKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDV 576

Query: 227 -------------EFKD------------VRADLFTYNTLIALYCKKGMHYEALAVQDRM 261
                        EF+             ++   +TYN LI  Y  KG+  EAL++Q+ M
Sbjct: 577 TYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGLLAEALSLQEEM 636

Query: 262 EREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDL 319
             +G SP + TYNS I+G C+ GRM +A +   D+      P+ V+Y TLI GYCR  +L
Sbjct: 637 VLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNL 696

Query: 320 EEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTL 379
            +A  L + + +  ++P +VTYN++L  LC++G +  A +L  EM  + IAPD VT   L
Sbjct: 697 MKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTIL 756

Query: 380 INAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGF 439
           +N  CK+G  + A +  + ML  GL LD + Y   I G  K  +   A  L   ML  GF
Sbjct: 757 VNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGF 816

Query: 440 SPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
            P    Y+ +VDG C   N E   +LL +
Sbjct: 817 PPDLIIYNVVVDGLCKLGNLEEASELLQK 845



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 110/377 (29%), Positives = 168/377 (44%), Gaps = 25/377 (6%)

Query: 171 LLNSLAKDRLTDMVWKVYKKMVQLGVVANIH-LYNVLIHACCKSSDVDKVEKLLCEMEFK 229
           +L  LA++ L    + V ++++     AN+H + +VLI  C  S    K+  LL      
Sbjct: 427 ILEILAQNNLMRSAYWVMERVIN----ANMHRIVDVLIGGCVSSEVSVKILDLL------ 476

Query: 230 DVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA 289
                       I +Y KK M  + L+V D+M +  +SPD+   N ++     +  M +A
Sbjct: 477 ------------IWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKA 524

Query: 290 RRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRK 347
             ++R +   G  P  VTY TL+D YC+   +++ L L   M  +G  P  VTYN ++  
Sbjct: 525 VEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLING 584

Query: 348 LCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLD 407
           L K+G    A  L+ EM +  +     T N LI  Y   G  A A+ ++  M+  G    
Sbjct: 585 LSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGLLAEALSLQEEMVLKGASPT 644

Query: 408 QFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLD 467
             TY + I+G CK   M  A + L  ML     P   SY+ L+ GYC   N      L D
Sbjct: 645 VATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFD 704

Query: 468 EFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
           E  S  L   +  Y  L+   C++ +++ AQ+L   M   GI  D V YT L     + G
Sbjct: 705 ELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMG 764

Query: 528 EPKACSDILDDMYRRRL 544
                 +  D+M    L
Sbjct: 765 SLSMAQEFFDEMLHEGL 781



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 116/256 (45%)

Query: 309 LIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKK 368
           LI  Y + + +E+ L + + M    + P V   N ILR L  +  +  A  +   M E  
Sbjct: 476 LIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFG 535

Query: 369 IAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAK 428
           I P  VT NTL+++YCK G     + + + M   G   +  TY  LI+G  K  E + AK
Sbjct: 536 IKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAK 595

Query: 429 ELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRF 488
            L+  ML  G   S  +Y+ L+ GY NK      L L +E V +G    V+ Y + I   
Sbjct: 596 GLIGEMLKTGLKVSAYTYNPLIYGYFNKGLLAEALSLQEEMVLKGASPTVATYNSFIYGL 655

Query: 489 CKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITL 548
           CK  ++  A +  + M  N +L D V Y +L Y Y R G       + D++    L  T+
Sbjct: 656 CKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTI 715

Query: 549 KIYRSFSASYAKDNEI 564
             Y +      +  E+
Sbjct: 716 VTYNTLLDGLCRQGEL 731


>gi|449453449|ref|XP_004144470.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g13630-like [Cucumis sativus]
          Length = 830

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 155/604 (25%), Positives = 266/604 (44%), Gaps = 78/604 (12%)

Query: 33  NIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNK 92
            + S+L+ T +  VL  L      P ++ AFF +  +    ++HS+ S + + HIL    
Sbjct: 75  TVVSTLSETVVDGVLDRLRTL--KPDVAVAFFYFLINEY-GFRHSIFSQFVVSHILAGKG 131

Query: 93  HFKSAQNMLEKIALRDFLSTPSVL-NALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQ 151
            FK   ++++ + +   L + S++ + L++   + D N  V   L   Y+  +M  D L 
Sbjct: 132 RFKELDSVIKNLIVDQGLGSASIICDLLLEKFRNWDSNGLVWDMLAFAYSRHEMIHDALF 191

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           V  +M+  N    +     LL+++   R TD++W VY ++   G   +    ++LIH  C
Sbjct: 192 VIAKMKDLNFQASVPTYNSLLHNM---RHTDIMWDVYNEIKVSGAPQSECTTSILIHGLC 248

Query: 212 KSSD----------------------------------VDKVEKLLCEMEFKDVRADLFT 237
           + S                                   +D      C M    +  D F+
Sbjct: 249 EQSKLEDAISFLHDSNKVVGPSIVSINTIMSKFCKVGLIDVARSFFCLMVKNGLLHDSFS 308

Query: 238 YNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD-- 295
           YN L+   C  G   EAL   D ME+ G+ PD+VTYN+L  GF   G M  AR++ +   
Sbjct: 309 YNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKML 368

Query: 296 IKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIR 355
           ++G  P+ VTYTTLI G+C+  ++EEAL+LR+   ++G    V+ YN +L  LCK GRI 
Sbjct: 369 LQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIE 428

Query: 356 DANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRM---------------- 399
           +A  L +EM   ++ PD +  + LI+  CK G    A ++  +M                
Sbjct: 429 EALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVL 488

Query: 400 -------------------LEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFS 440
                                  LM D   Y  +I G+ +   +  A +L + M++ G +
Sbjct: 489 LGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGIT 548

Query: 441 PSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRL 500
           PS  +++ L++G+C + +     K+L+    +GL   V  Y  L+  +C+   +      
Sbjct: 549 PSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHF 608

Query: 501 FNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAK 560
            + M+ N ++   V YT L     R  +      +L+ MY + L+     Y +    + K
Sbjct: 609 LHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCK 668

Query: 561 DNEI 564
             EI
Sbjct: 669 GKEI 672



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 104/392 (26%), Positives = 194/392 (49%), Gaps = 2/392 (0%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           ++ L +FD+M    L P     ++L++ L K+      +++Y++M       +      +
Sbjct: 428 EEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAV 487

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           +    K+ ++ +           D+  D+  YN +I  Y +     EA+ +  +M   GI
Sbjct: 488 LLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGI 547

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
           +P +VT+N+LI+GFCR G + EAR++   I  KG  P+ VTYTTL++ YC   +++E   
Sbjct: 548 TPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFH 607

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
               M A  V P  VTY  +++ LC++ ++ ++ +LL  M  K + PD+VT NT+I  +C
Sbjct: 608 FLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFC 667

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           K  +   A+++ N ML       Q TYK LI+  C   ++     ++  + D   +    
Sbjct: 668 KGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKV 727

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
           +Y  ++  +C K      L   ++ +++G  + +  Y A+I R CK+  +  A+  F +M
Sbjct: 728 TYMTIIKAHCAKGQVSKALGYFNQMLAKGFVISIRDYSAVINRLCKRGLITEAKYFFVMM 787

Query: 505 QGNGILGDSVIYTSLAYAYWRAGEPKACSDIL 536
              G+  D  I  ++  A+ + G   +  + L
Sbjct: 788 LSEGVTPDPEICKTVLNAFHQQGNNSSVFEFL 819



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 117/408 (28%), Positives = 194/408 (47%), Gaps = 12/408 (2%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKD----RLTDMVWKVYKKMVQLGVVANIHLY 203
           + L   D M  H + P +    V  N+LAK      L     KV +KM+  G+  ++  Y
Sbjct: 324 EALGFTDDMEKHGVEPDV----VTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTY 379

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER 263
             LI   C+  ++++  KL  E   +  + ++  YN L++  CK G   EAL + D ME 
Sbjct: 380 TTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMET 439

Query: 264 EGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEE 321
             + PD + Y+ LIHG C+EG ++ A +L+    +K   P+H     ++ G  +  ++ E
Sbjct: 440 LRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISE 499

Query: 322 ALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
           A    +      +   VV YN ++    +   I +A +L  +M E+ I P  VT NTLIN
Sbjct: 500 ARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLIN 559

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
            +C+ GD   A K+   +   GL+    TY  L++ +C+   M      L  M      P
Sbjct: 560 GFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVP 619

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
           ++ +Y+ L+ G C +N     L+LL+   ++GL  D   Y  +I+ FCK +++  A +L+
Sbjct: 620 THVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLY 679

Query: 502 NLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLK 549
           N+M  +      V Y  L  A    G+ K    ++  +  R   ITLK
Sbjct: 680 NMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRN--ITLK 725



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 98/366 (26%), Positives = 167/366 (45%), Gaps = 37/366 (10%)

Query: 146 TQDGLQVFDQMRVHNLMPHLHACTVLLNSLAK-----------------DRLTDMV---- 184
            Q   Q+++QMR+    PH  A   +L  L K                 D + D+V    
Sbjct: 462 VQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNI 521

Query: 185 --------------WKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKD 230
                          ++Y KM++ G+  ++  +N LI+  C+  D+ +  K+L  +  K 
Sbjct: 522 MIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKG 581

Query: 231 VRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREAR 290
           +   + TY TL+  YC+ G   E       ME   + P  VTY  LI G CR+ +M E+ 
Sbjct: 582 LVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESL 641

Query: 291 RLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
           +L   +  KG  P+ VTY T+I  +C+  ++ +AL+L  +M      P  VTY  ++  L
Sbjct: 642 QLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINAL 701

Query: 349 CKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ 408
           C  G ++D +R++  + ++ I    VT  T+I A+C  G  + A+   N+ML  G ++  
Sbjct: 702 CIFGDLKDVDRMVVSIEDRNITLKKVTYMTIIKAHCAKGQVSKALGYFNQMLAKGFVISI 761

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
             Y A+I+  CK   +  AK     ML  G +P       +++ +  + N  ++ + L  
Sbjct: 762 RDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPDPEICKTVLNAFHQQGNNSSVFEFLAM 821

Query: 469 FVSRGL 474
            V  G 
Sbjct: 822 VVKSGF 827



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 92/350 (26%), Positives = 165/350 (47%), Gaps = 14/350 (4%)

Query: 222 LLCEM---EFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIH 278
           ++C++   +F++  ++   ++ L   Y +  M ++AL V  +M+       + TYNSL+H
Sbjct: 154 IICDLLLEKFRNWDSNGLVWDMLAFAYSRHEMIHDALFVIAKMKDLNFQASVPTYNSLLH 213

Query: 279 GFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGV 338
                  M +     + + GA  +  T + LI G C  + LE+A+      + K V P +
Sbjct: 214 NMRHTDIMWDVYNEIK-VSGAPQSECTTSILIHGLCEQSKLEDAISFLHD-SNKVVGPSI 271

Query: 339 VTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNR 398
           V+ N+I+ K CK G I  A      M +  +  D+ + N L++  C  G    A+   + 
Sbjct: 272 VSINTIMSKFCKVGLIDVARSFFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDD 331

Query: 399 MLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNN 458
           M + G+  D  TY  L  GF     M  A++++  ML  G +P   +Y+ L+ G+C   N
Sbjct: 332 MEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGN 391

Query: 459 EEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTS 518
            E  LKL  E +SRG  ++V  Y  L+   CK  +++ A  LF+ M+   +  D ++Y+ 
Sbjct: 392 IEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSI 451

Query: 519 LAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLF 568
           L +   + G  +    + + M         ++ R F   +A+   +L LF
Sbjct: 452 LIHGLCKEGFVQRAYQLYEQM---------RLKRKFPHHFAQRAVLLGLF 492



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/257 (26%), Positives = 124/257 (48%), Gaps = 2/257 (0%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           ++ + +R+  L+P +   T L+N+  +      ++    +M    VV     Y VLI   
Sbjct: 572 KMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGL 631

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           C+ + + +  +LL  M  K +  D  TYNT+I  +CK     +AL + + M      P  
Sbjct: 632 CRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQ 691

Query: 271 VTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
           VTY  LI+  C  G +++  R+   I  +  T   VTY T+I  +C    + +AL     
Sbjct: 692 VTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKVTYMTIIKAHCAKGQVSKALGYFNQ 751

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M AKG    +  Y++++ +LCK G I +A      M  + + PD   C T++NA+ + G+
Sbjct: 752 MLAKGFVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPDPEICKTVLNAFHQQGN 811

Query: 389 TASAMKVKNRMLEAGLM 405
            +S  +    ++++G +
Sbjct: 812 NSSVFEFLAMVVKSGFI 828



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 93/380 (24%), Positives = 172/380 (45%), Gaps = 28/380 (7%)

Query: 84  MIHILTKNKHFKSAQNMLEKIAL-RDF---LSTPSVLNALVKIHDDPDGNSHVLSW---- 135
           +IH L K    + A  + E++ L R F    +  +VL  L K  +  +  ++  +W    
Sbjct: 452 LIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMD 511

Query: 136 ----LVIF------YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVW 185
               +V++      Y  L    + +Q++ +M    + P +     L+N     R  D++ 
Sbjct: 512 LMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFC--RRGDLME 569

Query: 186 KVYKKMVQL----GVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
              +KM+++    G+V ++  Y  L++A C+  ++ ++   L EME   V     TY  L
Sbjct: 570 A--RKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVL 627

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGA 299
           I   C++   +E+L + + M  +G+ PD VTYN++I  FC+   + +A +L+    +   
Sbjct: 628 IKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNC 687

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
            P  VTY  LI+  C   DL++  R+   +  + +    VTY +I++  C +G++  A  
Sbjct: 688 DPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKVTYMTIIKAHCAKGQVSKALG 747

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
             N+M  K         + +IN  CK G    A      ML  G+  D    K +++ F 
Sbjct: 748 YFNQMLAKGFVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPDPEICKTVLNAFH 807

Query: 420 KAKEMDIAKELLFGMLDAGF 439
           +        E L  ++ +GF
Sbjct: 808 QQGNNSSVFEFLAMVVKSGF 827


>gi|449531231|ref|XP_004172591.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like, partial [Cucumis sativus]
          Length = 602

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 145/566 (25%), Positives = 269/566 (47%), Gaps = 17/566 (3%)

Query: 12  KFIKTISAIMLKGHWAKL-LNPNIASSLTSTAIHKVLLNLYNCCHIPSLSC-AFFKWAES 69
           +    I+ ++LK         P++ S+  S  +  VL +     ++P+ SC  FF +   
Sbjct: 1   RLTANIAKLILKSGLQPFKTTPSLLSNFDSRVMQLVLSD----PNLPTRSCLRFFDFLRQ 56

Query: 70  AVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFL--STPSVLNALVKIHDDPD 127
             P+ K  L +H  +   L + + F   +N+L+ I     L  +   +++++    ++P 
Sbjct: 57  N-PSRKPDLPAHLILFSRLYRARKFAEMKNVLKFIVNDGNLWSNVERIVSSIGGEFNEPS 115

Query: 128 GNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKV 187
                   L   Y + +M    L+VFD  R         +C   L +L +    ++  + 
Sbjct: 116 IVEKFCDMLFRVYMDNRMFDSSLEVFDYARKKGFEIDERSCFEFLLALKRSGNMELCVEF 175

Query: 188 YKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCK 247
            ++MV  G+   +  +  ++   CK  +V + + L+ E+  K  +  + TYNTL+  Y +
Sbjct: 176 LRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIE 235

Query: 248 ---KGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPN 302
               G   E L++   ME+  +  ++ TY  LI  + R  ++ EA +LF ++  KG  P+
Sbjct: 236 IKDVGGVNEILSL---MEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPD 292

Query: 303 HVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLN 362
              YT++I+  C+  +++ A  L + M  + + P   TY +++   CK G ++ A  ++N
Sbjct: 293 VYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVN 352

Query: 363 EMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAK 422
           +M  K +  + V  NTL++ YCK G    A++++N M + G  +D FT   +  GFC++ 
Sbjct: 353 DMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSN 412

Query: 423 EMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYR 482
             + AK LL  M + G +P+  S+S L+D YC + N     +L      +G    V  Y 
Sbjct: 413 RREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYN 472

Query: 483 ALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRR 542
           A I R+CKK K++ A +L N MQ  G++ D+  YTSL      +G      ++ ++M + 
Sbjct: 473 AFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQL 532

Query: 543 RLMITLKIYRSFSASYAKDNEILDLF 568
            L   +  Y    +  +KD    + F
Sbjct: 533 GLNRNVVTYTVIISGLSKDGRADEAF 558



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 119/378 (31%), Positives = 189/378 (50%), Gaps = 2/378 (0%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           + D++      P +     LLN   + +    V ++   M +  V  N+  Y +LI    
Sbjct: 210 LMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYS 269

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           +SS +++ EKL  EM  K +  D++ Y ++I   CK G    A  + D M    + P+  
Sbjct: 270 RSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAY 329

Query: 272 TYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           TY +LI+G C+ G M+ A  +  D+  KG   N V + TL+DGYC+   ++EALRL+ +M
Sbjct: 330 TYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIM 389

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
             KG      T N I    C+  R  +A RLL  M E+ +AP+ V+ + LI+ YCK  + 
Sbjct: 390 QQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNF 449

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
           A A ++   M + G      TY A I  +CK  +M+ A +L+  M + G  P   +Y+ L
Sbjct: 450 AEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSL 509

Query: 450 VDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGI 509
           +DG     N +  L+L +E    GL  +V  Y  +I    K  + D A +L++ M   GI
Sbjct: 510 IDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGI 569

Query: 510 LGDSVIYTSLAYAYWRAG 527
           + D  IY+SL  +  + G
Sbjct: 570 VPDDGIYSSLIASLHKVG 587



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/152 (25%), Positives = 66/152 (43%)

Query: 133 LSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMV 192
            S L+  Y   +   +  ++F  M      P +      +    K    +  +K+  +M 
Sbjct: 436 FSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQ 495

Query: 193 QLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHY 252
           + G++ + + Y  LI     S +VD+  +L  EM    +  ++ TY  +I+   K G   
Sbjct: 496 ERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRAD 555

Query: 253 EALAVQDRMEREGISPDIVTYNSLIHGFCREG 284
           EA  + D M +EGI PD   Y+SLI    + G
Sbjct: 556 EAFKLYDEMNKEGIVPDDGIYSSLIASLHKVG 587


>gi|356529971|ref|XP_003533559.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Glycine max]
          Length = 693

 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 140/524 (26%), Positives = 252/524 (48%), Gaps = 46/524 (8%)

Query: 62  AFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNAL-- 119
           +FF WA  A   ++H  + +      L  NK+F+ A  +++ + ++ F     V  A+  
Sbjct: 97  SFFNWA-IASSKFRHFTRLYIACAASLISNKNFEKAHEVMQCM-VKSFAEIGRVKEAIEM 154

Query: 120 -VKIHDDPDGNS-HVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLL----- 172
            +++H+     S   L+W+V     + + +    +FD+M    + P+  +  V++     
Sbjct: 155 VIEMHNQGLAPSTKTLNWVVKIVTEMGLVEYAENLFDEMCARGVQPNCVSYRVMVVGYCK 214

Query: 173 --NSLAKDR-----------------------------LTDMVWKVYKKMVQLGVVANIH 201
             N L  DR                             +T  +W  +++  ++G+  N+ 
Sbjct: 215 LGNVLESDRWLGGMIERGFVVDNATLSLIVREFCEKGFVTRALW-YFRRFCEMGLRPNLI 273

Query: 202 LYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRM 261
            +  +I   CK   V +  ++L EM  +  + +++T+  LI   CKKG   +A  +  ++
Sbjct: 274 NFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKL 333

Query: 262 ER-EGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRAND 318
            R E   P+++TY ++I G+CR+ +M  A  L   +K  G  PN  TYTTLIDG+C+A +
Sbjct: 334 VRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGN 393

Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT 378
            E A  L  VM  +G  P V TYN+I+  LCK+GR+++A ++L       +  D VT   
Sbjct: 394 FERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDADKVTYTI 453

Query: 379 LINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAG 438
           LI+ +CK  +   A+ + N+M+++G+  D  +Y  LI  FC+ K M  ++      +  G
Sbjct: 454 LISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKESEMFFEEAVRFG 513

Query: 439 FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQ 498
             P+  +Y+ ++ GYC + N    LK        G   D   Y ALI   CK+ K+D A+
Sbjct: 514 LVPTNKTYTSMICGYCREGNLRLALKFFHRMSDHGCASDSITYGALISGLCKQSKLDEAR 573

Query: 499 RLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRR 542
            L++ M   G+    V   +LAY Y +  +  +   +L+ + ++
Sbjct: 574 CLYDAMIEKGLTPCEVTRVTLAYEYCKIDDGCSAMVVLERLEKK 617



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 105/400 (26%), Positives = 201/400 (50%), Gaps = 10/400 (2%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQL-GVVANIHLYNV 205
           +   ++ ++M      P+++  T L++ L K   T+  ++++ K+V+      N+  Y  
Sbjct: 289 KQAFEMLEEMVGRGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTA 348

Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
           +I   C+   +++ E LL  M+ + +  +  TY TLI  +CK G    A  + + M  EG
Sbjct: 349 MISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEG 408

Query: 266 ISPDIVTYNSLIHGFCREGRMREARRL----FRDIKGATPNHVTYTTLIDGYCRANDLEE 321
            SP++ TYN+++ G C++GR++EA ++    FR+  G   + VTYT LI  +C+  ++++
Sbjct: 409 FSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRN--GLDADKVTYTILISEHCKQAEIKQ 466

Query: 322 ALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
           AL L   M   G+ P + +Y +++   C+E R++++     E     + P N T  ++I 
Sbjct: 467 ALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKESEMFFEEAVRFGLVPTNKTYTSMIC 526

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
            YC+ G+   A+K  +RM + G   D  TY ALI G CK  ++D A+ L   M++ G +P
Sbjct: 527 GYCREGNLRLALKFFHRMSDHGCASDSITYGALISGLCKQSKLDEARCLYDAMIEKGLTP 586

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
              +   L   YC  ++  + + +L+    +   + V     L+R+ C + KV  A   F
Sbjct: 587 CEVTRVTLAYEYCKIDDGCSAMVVLERLEKK---LWVRTVNTLVRKLCSERKVGMAALFF 643

Query: 502 NLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
           + +       + V   +   A + + +    SD+   +Y+
Sbjct: 644 HKLLDKDPNVNRVTIAAFMTACYESNKYDLVSDLSARIYK 683



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 118/398 (29%), Positives = 185/398 (46%), Gaps = 5/398 (1%)

Query: 190 KMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKG 249
           +M   G+  +    N ++    +   V+  E L  EM  + V+ +  +Y  ++  YCK G
Sbjct: 157 EMHNQGLAPSTKTLNWVVKIVTEMGLVEYAENLFDEMCARGVQPNCVSYRVMVVGYCKLG 216

Query: 250 MHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYT 307
              E+      M   G   D  T + ++  FC +G +  A   FR     G  PN + +T
Sbjct: 217 NVLESDRWLGGMIERGFVVDNATLSLIVREFCEKGFVTRALWYFRRFCEMGLRPNLINFT 276

Query: 308 TLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRL-LNEMNE 366
            +I+G C+   +++A  + E M  +G  P V T+ +++  LCK+G    A RL L  +  
Sbjct: 277 CMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRS 336

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
           +   P+ +T   +I+ YC+      A  + +RM E GL  +  TY  LI G CKA   + 
Sbjct: 337 ENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFER 396

Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
           A EL+  M + GFSP+ C+Y+ +VDG C K   +   K+L      GL  D   Y  LI 
Sbjct: 397 AYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDADKVTYTILIS 456

Query: 487 RFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMI 546
             CK+ ++  A  LFN M  +GI  D   YT+L   + R    K      ++  R  L+ 
Sbjct: 457 EHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKESEMFFEEAVRFGLVP 516

Query: 547 TLKIYRSFSASYAKDNEI-LDL-FWSHVVDRGLMSKHI 582
           T K Y S    Y ++  + L L F+  + D G  S  I
Sbjct: 517 TNKTYTSMICGYCREGNLRLALKFFHRMSDHGCASDSI 554



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 110/374 (29%), Positives = 174/374 (46%), Gaps = 24/374 (6%)

Query: 84  MIHILTKNKHFKSAQNMLEKI-------------ALRDFLS----TPSVLNALVKIHDDP 126
           MI  L K    K A  MLE++             AL D L     T       +K+    
Sbjct: 278 MIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSE 337

Query: 127 DGNSHVLSWLVIF--YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMV 184
           +   +VL++  +   Y   +       +  +M+   L P+ +  T L++   K    +  
Sbjct: 338 NHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERA 397

Query: 185 WKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIAL 244
           +++   M + G   N+  YN ++   CK   V +  K+L       + AD  TY  LI+ 
Sbjct: 398 YELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDADKVTYTILISE 457

Query: 245 YCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPN 302
           +CK+    +AL + ++M + GI PDI +Y +LI  FCRE RM+E+   F +    G  P 
Sbjct: 458 HCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKESEMFFEEAVRFGLVPT 517

Query: 303 HVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLN 362
           + TYT++I GYCR  +L  AL+    M+  G     +TY +++  LCK+ ++ +A  L +
Sbjct: 518 NKTYTSMICGYCREGNLRLALKFFHRMSDHGCASDSITYGALISGLCKQSKLDEARCLYD 577

Query: 363 EMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAK 422
            M EK + P  VT  TL   YCKI D  SAM V  R LE  L +   T   L+   C  +
Sbjct: 578 AMIEKGLTPCEVTRVTLAYEYCKIDDGCSAMVVLER-LEKKLWVR--TVNTLVRKLCSER 634

Query: 423 EMDIAKELLFGMLD 436
           ++ +A      +LD
Sbjct: 635 KVGMAALFFHKLLD 648



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 57/259 (22%), Positives = 118/259 (45%), Gaps = 1/259 (0%)

Query: 303 HVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLN 362
           H     ++  +     ++EA+ +   M  +G+ P   T N +++ + + G +  A  L +
Sbjct: 132 HEVMQCMVKSFAEIGRVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGLVEYAENLFD 191

Query: 363 EMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAK 422
           EM  + + P+ V+   ++  YCK+G+   + +    M+E G ++D  T   ++  FC+  
Sbjct: 192 EMCARGVQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSLIVREFCEKG 251

Query: 423 EMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYR 482
            +  A        + G  P+  +++ +++G C + + +   ++L+E V RG   +V  + 
Sbjct: 252 FVTRALWYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHT 311

Query: 483 ALIRRFCKKEKVDYAQRLF-NLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
           ALI   CKK   + A RLF  L++      + + YT++   Y R  +      +L  M  
Sbjct: 312 ALIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKE 371

Query: 542 RRLMITLKIYRSFSASYAK 560
           + L      Y +    + K
Sbjct: 372 QGLAPNTNTYTTLIDGHCK 390


>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 520

 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 127/434 (29%), Positives = 215/434 (49%), Gaps = 4/434 (0%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           SVL  ++K+   P  N+ +L+ L+         +  L   D++          +  +LLN
Sbjct: 66  SVLGKILKLGYQP--NTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLN 123

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
            L K   T    K+ + +       ++ +Y+ +I   CK   VD+   L  EM  + +  
Sbjct: 124 GLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFP 183

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           D+ TY TLI  +C  G   EA  + + M  + I+P+I TYN+LI   C+EG+++E++ L 
Sbjct: 184 DVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLL 243

Query: 294 RDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
             +  KG  P+ V Y+ L+DGYC   ++++A ++  VM   GV P V +YN I+  LCK 
Sbjct: 244 AVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKG 303

Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
            R+ +A  LL EM  K + PD VT ++LI+  CK+G   + + +   M   G   +  TY
Sbjct: 304 KRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTY 363

Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
            +L+ G CK + +D A  L   M + G  P+  +Y+ L+DG C     +    L    + 
Sbjct: 364 NSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLV 423

Query: 472 RGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKA 531
           +G C+DV  Y  +I   CK+   D A  + + M+ NG + ++V +  +  +     E   
Sbjct: 424 KGYCIDVWTYTVMISGLCKEGMFDEALAMKSKMEDNGCIPNAVTFEIIIRSLLEKDENDK 483

Query: 532 CSDILDDMYRRRLM 545
              +L +M  + L+
Sbjct: 484 AEKLLHEMIAKGLL 497



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 115/378 (30%), Positives = 190/378 (50%), Gaps = 2/378 (0%)

Query: 155 QMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSS 214
           QM    ++P L   ++L+N           + V  K+++LG   N  + N L+   C   
Sbjct: 35  QMEAKGIVPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILNTLMKGLCLKG 94

Query: 215 DVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYN 274
           +V K      ++  +  + D  +Y  L+   CK G    A+ +   +E     PD+V Y+
Sbjct: 95  EVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYS 154

Query: 275 SLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAK 332
           ++I G C++  + EA  L+ ++  +G  P+ +TYTTLI G+C A  L EA  L   M  K
Sbjct: 155 TIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILK 214

Query: 333 GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
            + P + TYN+++  LCKEG+++++  LL  M +K + PD V  + L++ YC +G+   A
Sbjct: 215 NINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKA 274

Query: 393 MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
            ++   M++ G+  D ++Y  +I+G CK K +D A  LL  ML     P   +YS L+DG
Sbjct: 275 KQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDG 334

Query: 453 YCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGD 512
            C       +L L  E   RG   ++  Y +L+   CK + +D A  LF  M+  GI  +
Sbjct: 335 LCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPN 394

Query: 513 SVIYTSLAYAYWRAGEPK 530
              YT+L     + G  K
Sbjct: 395 KYTYTALIDGLCKGGRLK 412



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 96/342 (28%), Positives = 162/342 (47%), Gaps = 2/342 (0%)

Query: 225 EMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREG 284
           +ME K +  DL T + LI  +C  G    + +V  ++ + G  P+ +  N+L+ G C +G
Sbjct: 35  QMEAKGIVPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILNTLMKGLCLKG 94

Query: 285 RMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYN 342
            ++++      +  +G   + V+Y  L++G C+  +   A++L   +  +   P VV Y+
Sbjct: 95  EVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYS 154

Query: 343 SILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEA 402
           +I+  LCK+  + +A  L +EMN + I PD +T  TLI  +C  G    A  + N M+  
Sbjct: 155 TIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILK 214

Query: 403 GLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEAL 462
            +  + +TY  LI   CK  ++  +K LL  M   G  P    YS L+DGYC     +  
Sbjct: 215 NINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKA 274

Query: 463 LKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYA 522
            ++    V  G+  DV  Y  +I   CK ++VD A  L   M    ++ D+V Y+SL   
Sbjct: 275 KQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDG 334

Query: 523 YWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
             + G      D+  +M+ R     L  Y S      K+  +
Sbjct: 335 LCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNL 376



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 82/296 (27%), Positives = 153/296 (51%), Gaps = 2/296 (0%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           +   + ++M + N+ P+++    L+++L K+        +   M + GV  ++ +Y++L+
Sbjct: 203 EAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILM 262

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
              C   +V K +++   M    V  D+++YN +I   CK     EA+ +   M  + + 
Sbjct: 263 DGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMI 322

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
           PD VTY+SLI G C+ GR+     L +++  +G   N VTY +L+DG C+  +L++A+ L
Sbjct: 323 PDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIAL 382

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
              M  +G+ P   TY +++  LCK GR++    L   +  K    D  T   +I+  CK
Sbjct: 383 FMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCK 442

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
            G    A+ +K++M + G + +  T++ +I    +  E D A++LL  M+  G  P
Sbjct: 443 EGMFDEALAMKSKMEDNGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEMIAKGLLP 498



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 86/320 (26%), Positives = 151/320 (47%), Gaps = 19/320 (5%)

Query: 54  CHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTP 113
           C    L  AF    E  + N   ++ ++ T+I  L K    K ++N+L  +  +     P
Sbjct: 196 CLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGV--KP 253

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
            V+               + S L+  Y  +   Q   Q+F  M    + P +++  +++N
Sbjct: 254 DVV---------------IYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIIN 298

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
            L K +  D    + ++M+   ++ +   Y+ LI   CK   +  +  L  EM  +   A
Sbjct: 299 GLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPA 358

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           +L TYN+L+   CK     +A+A+  +M+  GI P+  TY +LI G C+ GR+++ + LF
Sbjct: 359 NLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALF 418

Query: 294 RD--IKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
           +   +KG   +  TYT +I G C+    +EAL ++  M   G  P  VT+  I+R L ++
Sbjct: 419 QHLLVKGYCIDVWTYTVMISGLCKEGMFDEALAMKSKMEDNGCIPNAVTFEIIIRSLLEK 478

Query: 352 GRIRDANRLLNEMNEKKIAP 371
                A +LL+EM  K + P
Sbjct: 479 DENDKAEKLLHEMIAKGLLP 498


>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
 gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
          Length = 695

 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 128/437 (29%), Positives = 227/437 (51%), Gaps = 10/437 (2%)

Query: 147 QDGL--QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYN 204
           Q GL  ++FD + V    P++    ++++ L K+        ++ +M  +G   ++  YN
Sbjct: 184 QGGLVRRLFDLLPV----PNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYN 239

Query: 205 VLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMERE 264
            LI    K  D+++VE+L+ EM      AD+ TYN LI  + K G   +A +    M+R+
Sbjct: 240 SLIDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQ 299

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEA 322
           G+  ++VT+++ +  FC+EG ++EA +LF    ++G  PN  TYT+L+DG C+A  L++A
Sbjct: 300 GVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDA 359

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
           + L + M  +G+ P VVTY  ++  LCKEG++ +A+ +L+ M    +  + +   TLI+ 
Sbjct: 360 IVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHG 419

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +    ++  A+ + N+M   G+ LD   Y  LI G CK +++D AK LL  M   G  P+
Sbjct: 420 HFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPN 479

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
              Y+ ++D       E   + LL + +  G   +V  Y ALI   CK   +  A   FN
Sbjct: 480 TVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFN 539

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDN 562
            M+  G+  +   YT+L   + + G       ++++M  + + +   +Y S    Y K  
Sbjct: 540 KMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQA 599

Query: 563 EILDLFW--SHVVDRGL 577
            + D F   + +++ GL
Sbjct: 600 NLQDAFALKTKMIESGL 616



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 116/379 (30%), Positives = 190/379 (50%), Gaps = 2/379 (0%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N    S  V  +    + Q+ +++F QMRV  +MP+    T L++   K    D    + 
Sbjct: 304 NVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLL 363

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
            +MV  G+V N+  Y V++   CK   V + + +L  ME   V+A+   Y TLI  +   
Sbjct: 364 DEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMN 423

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGAT--PNHVTY 306
                AL + ++M+ +G+  D+  Y +LI G C++ ++ EA+ L   + G    PN V Y
Sbjct: 424 NNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIY 483

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
           TT++D   +A    EA+ L   +   G  P VVTY +++  LCK G I +A    N+M E
Sbjct: 484 TTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRE 543

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
             + P+      LI+ +CKIG    AM + N M++ G+ LD+  Y +LI G+ K   +  
Sbjct: 544 LGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQD 603

Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
           A  L   M+++G       Y+  + G+CN N  +    +L E +  G+  D +VY  LIR
Sbjct: 604 AFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLIR 663

Query: 487 RFCKKEKVDYAQRLFNLMQ 505
           ++ K   ++ A  L N M+
Sbjct: 664 KYQKLGNMEEASSLQNEME 682



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 119/426 (27%), Positives = 197/426 (46%), Gaps = 37/426 (8%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           Q+  +MR       +     L+N  +K    +  +  + +M + GVVAN+  ++  + A 
Sbjct: 256 QLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAF 315

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           CK   V +  KL  +M  + +  + FTY +L+   CK G   +A+ + D M  +G+ P++
Sbjct: 316 CKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNV 375

Query: 271 VTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGY--------------- 313
           VTY  ++ G C+EG++ EA  +   ++  G   N + YTTLI G+               
Sbjct: 376 VTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQ 435

Query: 314 --------------------CRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGR 353
                               C+   ++EA  L   MA  G+ P  V Y +I+  L K G+
Sbjct: 436 MKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGK 495

Query: 354 IRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKA 413
             +A  LL+++ +    P+ VT   LI+  CK G  + A+   N+M E GL  +   Y A
Sbjct: 496 ESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTA 555

Query: 414 LIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
           LI GFCK   ++ A  L+  M+D G S     Y+ L+DGY  + N +    L  + +  G
Sbjct: 556 LIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESG 615

Query: 474 LCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACS 533
           L +D+  Y   I  FC    +  A+ + + M G GI  D  +Y  L   Y + G  +  S
Sbjct: 616 LQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRKYQKLGNMEEAS 675

Query: 534 DILDDM 539
            + ++M
Sbjct: 676 SLQNEM 681



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 119/433 (27%), Positives = 201/433 (46%), Gaps = 9/433 (2%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           +F +M+     P +     L++   K    + V ++  +M + G  A++  YN LI+   
Sbjct: 222 LFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFS 281

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           K   ++K      EM+ + V A++ T++T +  +CK+G+  EA+ +  +M   G+ P+  
Sbjct: 282 KFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEF 341

Query: 272 TYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           TY SL+ G C+ GR+ +A  L  ++  +G  PN VTYT ++DG C+   + EA  +  +M
Sbjct: 342 TYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLM 401

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
              GV    + Y +++           A  LLN+M  K +  D     TLI   CK    
Sbjct: 402 ERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKV 461

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
             A  + ++M   GL  +   Y  ++    KA +   A  LL  +LD+GF P+  +Y  L
Sbjct: 462 DEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCAL 521

Query: 450 VDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGI 509
           +DG C   +    +   ++    GL  +V  Y ALI  FCK   ++ A  L N M   G+
Sbjct: 522 IDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGM 581

Query: 510 LGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFW 569
             D V+YTSL   Y +    +    +   M    L + L  Y  F + +   N + +   
Sbjct: 582 SLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEA-- 639

Query: 570 SHVVDRGLMSKHI 582
                RG++S+ I
Sbjct: 640 -----RGVLSEMI 647


>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
 gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
          Length = 1636

 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 139/497 (27%), Positives = 229/497 (46%), Gaps = 54/497 (10%)

Query: 80  SHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIF 139
           ++ TMI+ L+K+     A  +LE++    F   P+V +    +H                
Sbjct: 232 TYNTMINGLSKSDRLDDAIRLLEEMVDNGF--APNVFSYNTVLHG--------------- 274

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
           +      ++ L + +QM      P + + T ++N L K    D   +V  KM+Q G   N
Sbjct: 275 FCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPN 334

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
           +  Y  L+   C+  D+D   +L+ +M  +  R +  TYN ++ ++C++     A  V  
Sbjct: 335 VITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQ 394

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRA- 316
            M + G  PD + Y+++I GFC+ G++REA  L   +  +G  P+    +TLID  C+A 
Sbjct: 395 MMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAA 454

Query: 317 --NDLEEALRLR--------------------------------EVMAAKGVYPGVVTYN 342
             +  +E LR+                                 +VM     YP VVTYN
Sbjct: 455 AIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYN 514

Query: 343 SILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEA 402
           S++  LCK  RI DA  L + M    + PD VT + +I+++CK  +  SA K+  RM EA
Sbjct: 515 SVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEA 574

Query: 403 GLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEAL 462
             + D  TY ALI+G CKA  +D A ++   ML  G +P+  +Y+ L+DG C  N  E  
Sbjct: 575 KCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQA 634

Query: 463 LKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYA 522
            ++L+    +    D   Y  LI   C   +++ A R+   M+  G L D + Y +L  A
Sbjct: 635 AEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRA 694

Query: 523 YWRAGEPKACSDILDDM 539
             +    +    +L +M
Sbjct: 695 LQKTNNLELVEQLLKEM 711



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 145/507 (28%), Positives = 239/507 (47%), Gaps = 30/507 (5%)

Query: 25   HWAKLLNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTM 84
             +A+         LT+T + KVL  + N       +  FF WA S    Y H   +   +
Sbjct: 796  EYAETALERFTGKLTTTVVGKVLQGVRN----GDAALGFFDWATSQ-EGYNHDTYTCNCL 850

Query: 85   IHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLK 144
            +  L + K  K A     ++       +P++    + IH          ++         
Sbjct: 851  LQALLRLKRPKDAL----QVYRNKLCCSPNMFTFTILIHGLCRAGDIGTAY--------- 897

Query: 145  MTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG-VVANIHLY 203
                  ++  +M  H +  ++    V++  L   R  D   +++K+M + G    ++  Y
Sbjct: 898  ------ELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTY 951

Query: 204  NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER 263
            + ++ +  KS  VD   +L+ +M  K    ++ TY++L+   CK G   EA A+  RM R
Sbjct: 952  STIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTR 1011

Query: 264  EGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEE 321
             G SP+IVTYN++I G C+ GR+ EA  L  ++   G  PN VTYT L+D +C+    E+
Sbjct: 1012 SGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAED 1071

Query: 322  ALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
            A+ L EVM  KG  P + TYNS+L   CK+  +  A +LL+ M +K   P+ V+ NT+I 
Sbjct: 1072 AIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIA 1131

Query: 382  AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
              CK       + +  +ML    + D  T+  +I   CK   +DIA EL   + ++G +P
Sbjct: 1132 GLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTP 1191

Query: 442  SYCSYSWLVDGYCNKNNEEALLKLLDEFVSR-GLCVDVSVYRALIRRFCKKEKVDYAQRL 500
            +  +Y+ LV G C     +    LL E   + G   D+  Y  +I   CK ++VD A +L
Sbjct: 1192 NLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKL 1251

Query: 501  FNLMQGNGILGDSVIYTSL--AYAYWR 525
            F  M  +G+  D V Y+ +  +   WR
Sbjct: 1252 FLQMLSDGLAPDDVTYSIVISSLCKWR 1278



 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 149/566 (26%), Positives = 247/566 (43%), Gaps = 60/566 (10%)

Query: 36  SSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFK 95
             L+   + KVL  L +    P  +  FF+WAE+    Y+H +     ++++L K   + 
Sbjct: 89  GQLSPEIVGKVLQRLID----PGAALVFFEWAETR-DGYQHEIFCCNCLLNVLVKAHQYS 143

Query: 96  SAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQ 155
            A ++                    +I     G++   S L+  +          ++FD+
Sbjct: 144 QAHDLFRS-----------------RIEGQWGGDTVTYSTLISGFIRAGKILPAYELFDE 186

Query: 156 MRVHNLMPH---------------------LH------AC-------TVLLNSLAK-DRL 180
           M    L  H                     LH       C         ++N L+K DRL
Sbjct: 187 MNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKTCPPDSVTYNTMINGLSKSDRL 246

Query: 181 TDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNT 240
            D + ++ ++MV  G   N+  YN ++H  CK++ V+    LL +M  +    D+ +Y T
Sbjct: 247 DDAI-RLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTT 305

Query: 241 LIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KG 298
           +I   CK     EA  V D+M + G  P+++TY +L+ GFCR G +  A  L R +  +G
Sbjct: 306 VINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERG 365

Query: 299 ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDAN 358
             PN +TY  ++  +CR ND+E A ++ ++M   G  P  + Y++I+   CK G++R+A+
Sbjct: 366 YRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAH 425

Query: 359 RLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGF 418
            LL +M  +   PD    +TLI+A CK     SA ++    +      D   Y  LIH  
Sbjct: 426 DLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHAL 485

Query: 419 CKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDV 478
           CKAK +  A+  L  M+     P   +Y+ +VDG C          L D   + G+  DV
Sbjct: 486 CKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDV 545

Query: 479 SVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDD 538
             Y  +I  FCK   +D A ++   M+    + D V Y++L     +AG      D+  +
Sbjct: 546 VTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQE 605

Query: 539 MYRRRLMITLKIYRSFSASYAKDNEI 564
           M        L  Y +      K N++
Sbjct: 606 MLGCGCAPNLVTYNTLIDGLCKINKV 631



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 121/381 (31%), Positives = 199/381 (52%), Gaps = 5/381 (1%)

Query: 166  HACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCE 225
            + C  LL +L + +      +VY+   +L    N+  + +LIH  C++ D+    +LL E
Sbjct: 845  YTCNCLLQALLRLKRPKDALQVYRN--KLCCSPNMFTFTILIHGLCRAGDIGTAYELLKE 902

Query: 226  MEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG-ISPDIVTYNSLIHGFCREG 284
            M    V  ++  +N +I   C       AL +   ME  G   PD+ TY++++    + G
Sbjct: 903  MPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVDSLVKSG 962

Query: 285  RMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYN 342
            ++ +A RL  D+  KG +PN VTY++L+ G C+A  L+EA  L + M   G  P +VTYN
Sbjct: 963  KVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYN 1022

Query: 343  SILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEA 402
            +I+   CK GRI +A  LL EM +    P+ VT   L++A+CK G    A+ +   M+E 
Sbjct: 1023 TIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEK 1082

Query: 403  GLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEAL 462
            G + + FTY +L+  FCK  E++ A +LL  M+  G  P+  SY+ ++ G C        
Sbjct: 1083 GYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEG 1142

Query: 463  LKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYA 522
            + LL++ +S     D+  +  +I   CK  +VD A  LFNL+Q +G   + V Y SL + 
Sbjct: 1143 VLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHG 1202

Query: 523  YWRAGEPKACSDILDDMYRRR 543
              ++        +L +M R++
Sbjct: 1203 LCKSRRFDQAEYLLREMTRKQ 1223



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 128/488 (26%), Positives = 227/488 (46%), Gaps = 25/488 (5%)

Query: 85  IHILTKNKHFKSAQNMLEKIALRDFLS--TPSVLNALVKIHDDPDGNSHVLSWLVIFYAN 142
           I +L +     S +  L ++AL ++    +P ++  +++   DP        W       
Sbjct: 64  ISVLERIVQGASDEQAL-RVALDEYRGQLSPEIVGKVLQRLIDPGAALVFFEW------- 115

Query: 143 LKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHL 202
              T+DG Q       H +      C  LLN L K         +++  ++     +   
Sbjct: 116 -AETRDGYQ-------HEIF----CCNCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVT 163

Query: 203 YNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRME 262
           Y+ LI    ++  +    +L  EM  K ++A    + +++   C  G   +A+ +  R  
Sbjct: 164 YSTLISGFIRAGKILPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAV-LHFREM 222

Query: 263 REGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLE 320
            +   PD VTYN++I+G  +  R+ +A RL  ++   G  PN  +Y T++ G+C+AN +E
Sbjct: 223 SKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVE 282

Query: 321 EALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLI 380
            AL L E M  +G  P VV+Y +++  LCK  ++ +A R++++M ++   P+ +T  TL+
Sbjct: 283 NALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLV 342

Query: 381 NAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFS 440
           + +C++GD   A+++  +M E G   +  TY  ++H FC+  +M+ A ++L  M+  G  
Sbjct: 343 DGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCP 402

Query: 441 PSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRL 500
           P   +YS ++ G+C          LL++ + RG   DV+    LI   CK   +D AQ L
Sbjct: 403 PDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQEL 462

Query: 501 FNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAK 560
             +  G     D V Y+ L +A  +A         LD M + R    +  Y S      K
Sbjct: 463 LRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCK 522

Query: 561 DNEILDLF 568
              I D F
Sbjct: 523 SRRINDAF 530



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 119/383 (31%), Positives = 193/383 (50%), Gaps = 3/383 (0%)

Query: 140  YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
            +  L    +   + ++M      P++   TVLL++  K    +    + + MV+ G V N
Sbjct: 1028 HCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPN 1087

Query: 200  IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
            +  YN L+   CK  +V++  +LL  M  K    ++ +YNT+IA  CK    +E + + +
Sbjct: 1088 LFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLE 1147

Query: 260  RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRAN 317
            +M      PDIVT+N++I   C+  R+  A  LF  I+  G TPN VTY +L+ G C++ 
Sbjct: 1148 QMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSR 1207

Query: 318  DLEEA-LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTC 376
              ++A   LRE+   +G  P ++TYN+++  LCK  R+  A +L  +M    +APD+VT 
Sbjct: 1208 RFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTY 1267

Query: 377  NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD 436
            + +I++ CK      A  V   ML+ G      TY  LI GFCK   +D A E+L  +L 
Sbjct: 1268 SIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLS 1327

Query: 437  AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDY 496
             G  P   ++S  +D    +       +LL+  +  GL  D   Y  L++ FC     + 
Sbjct: 1328 KGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTED 1387

Query: 497  AQRLFNLMQGNGILGDSVIYTSL 519
            A  LF +M+  G   D+  YT+L
Sbjct: 1388 AVDLFEVMRQCGCEPDNATYTTL 1410



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 127/430 (29%), Positives = 198/430 (46%), Gaps = 38/430 (8%)

Query: 148  DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
            D  ++ + M      P++   + LL+ L K    D    + ++M + G   NI  YN +I
Sbjct: 966  DACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTII 1025

Query: 208  HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
               CK   +D+   LL EM     + ++ TY  L+  +CK G   +A+ + + M  +G  
Sbjct: 1026 DGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYV 1085

Query: 268  PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
            P++ TYNSL+  FC++  +  A +L   +  KG  PN V+Y T+I G C+A  + E + L
Sbjct: 1086 PNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLL 1145

Query: 326  REVMAA-----------------------------------KGVYPGVVTYNSILRKLCK 350
             E M +                                    G  P +VTYNS++  LCK
Sbjct: 1146 LEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCK 1205

Query: 351  EGRIRDANRLLNEMNEKK-IAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQF 409
              R   A  LL EM  K+  +PD +T NT+I+  CK      A K+  +ML  GL  D  
Sbjct: 1206 SRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDV 1265

Query: 410  TYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEF 469
            TY  +I   CK + MD A  +L  ML  GF P   +Y  L+DG+C   N +  L++L   
Sbjct: 1266 TYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLL 1325

Query: 470  VSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEP 529
            +S+G   DV  +   I    K+ ++  A  L   M   G++ D+V Y +L   +  A   
Sbjct: 1326 LSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLT 1385

Query: 530  KACSDILDDM 539
            +   D+ + M
Sbjct: 1386 EDAVDLFEVM 1395



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 89/303 (29%), Positives = 149/303 (49%), Gaps = 1/303 (0%)

Query: 263  REGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEA 322
            +EG + D  T N L+    R  R ++A +++R+    +PN  T+T LI G CRA D+  A
Sbjct: 837  QEGYNHDTYTCNCLLQALLRLKRPKDALQVYRNKLCCSPNMFTFTILIHGLCRAGDIGTA 896

Query: 323  LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNV-TCNTLIN 381
              L + M   GV   V+ +N +++ LC   ++  A  L  EM E    P +V T +T+++
Sbjct: 897  YELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVD 956

Query: 382  AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
            +  K G    A ++   M+  G   +  TY +L+HG CKA ++D A  LL  M  +G SP
Sbjct: 957  SLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSP 1016

Query: 442  SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
            +  +Y+ ++DG+C     +    LL+E V  G   +V  Y  L+  FCK  K + A  L 
Sbjct: 1017 NIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLV 1076

Query: 502  NLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKD 561
             +M   G + +   Y SL   + +  E +    +L  M ++  +  +  Y +  A   K 
Sbjct: 1077 EVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKA 1136

Query: 562  NEI 564
             ++
Sbjct: 1137 TKV 1139



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 79/273 (28%), Positives = 130/273 (47%), Gaps = 28/273 (10%)

Query: 83  TMIHILTKNKHFKSAQNMLE-KIAL---RDFLSTPSVLNALVKIHDDPDGNSHVLSWLVI 138
           T+I  L K     SAQ +L   I +    D ++   +++AL K    P+  S    WL +
Sbjct: 445 TLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAES----WLDV 500

Query: 139 FYANL------------------KMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRL 180
              N                   +   D   +FD+MR   +MP +   +++++S  KD  
Sbjct: 501 MVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNN 560

Query: 181 TDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNT 240
            D  +K+ ++M +   V ++  Y+ LI+  CK+  VDK   +  EM       +L TYNT
Sbjct: 561 LDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNT 620

Query: 241 LIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--G 298
           LI   CK     +A  + + M ++  +PD +TY  LI+G C   R+ EA R+ R++K  G
Sbjct: 621 LIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKDKG 680

Query: 299 ATPNHVTYTTLIDGYCRANDLEEALRLREVMAA 331
             P+ +TY TL+    + N+LE   +L + M A
Sbjct: 681 CLPDRMTYGTLLRALQKTNNLELVEQLLKEMEA 713



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 71/315 (22%), Positives = 132/315 (41%), Gaps = 47/315 (14%)

Query: 85   IHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLK 144
            I  L+K    + A  +LE +     +      N L+K                  + +  
Sbjct: 1341 IDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLK-----------------GFCDAS 1383

Query: 145  MTQDGLQVFDQMRVHNLMPHLHACTVLLNSLA-KDRLTDMVWKVYKKMVQLGVVANIHLY 203
            +T+D + +F+ MR     P     T L+  L  K    D++ +V K MV  G   N  L 
Sbjct: 1384 LTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLNHELS 1443

Query: 204  NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER 263
            +                KL   +E   V AD+     ++ ++ K G   +A  V + M++
Sbjct: 1444 S----------------KLEASIE---VEADVRLGCAIVDMFGKCGSPQDARKVFEGMDQ 1484

Query: 264  EGISPDIVTYNSLIHGFCREGRMREARRLFR--DIKGATPNHVTYTTLIDGYCRANDLEE 321
                 ++V +++++  +    +  +A  L+R   ++G  P+ VT+ +L+   C A  L+ 
Sbjct: 1485 R----NVVLWSAMLGVYVFHKQEEQAFGLWRVMGLEGVEPDAVTFLSLLTMCCHAGLLDA 1540

Query: 322  AL-RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLI 380
            A+     +    G+ PGV  ++ ++  L + G + +A  L+  M  K   P   T N L+
Sbjct: 1541 AVDEFVSISRDYGLEPGVDHFSCVIDLLGRLGLVNEAEDLMLGMPCK---PSAATWNCLL 1597

Query: 381  NAYCKIGDTASAMKV 395
            +AY   GD   A++V
Sbjct: 1598 SAYKICGDFERALRV 1612



 Score = 55.5 bits (132), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 75/368 (20%), Positives = 134/368 (36%), Gaps = 115/368 (31%)

Query: 77   SLQSHWTMIHILTKNKHFKSAQNMLEKIALR-----DFLSTPSVLNALVKIHDDPDGNSH 131
            +L ++ +++H L K++ F  A+ +L ++  +     D ++  +V++ L K          
Sbjct: 1192 NLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKS--------- 1242

Query: 132  VLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKM 191
                        K      ++F QM    L P     +++++SL K R  D    V + M
Sbjct: 1243 ------------KRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELM 1290

Query: 192  VQLGVVANIHLYNVLIHACCKSSDVDK----VEKLLCEMEFKDV---------------- 231
            ++ G       Y  LI   CK+ ++DK    ++ LL +  + DV                
Sbjct: 1291 LKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRL 1350

Query: 232  -----------RA----DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSL 276
                       RA    D  TYNTL+  +C   +  +A+ + + M + G  PD  TY +L
Sbjct: 1351 RQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTL 1410

Query: 277  ----------------------------------------------------IHGFCREG 284
                                                                +  F + G
Sbjct: 1411 VGHLVDKKSYKDLLAEVSKSMVDTGFKLNHELSSKLEASIEVEADVRLGCAIVDMFGKCG 1470

Query: 285  RMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSI 344
              ++AR++F  +     N V ++ ++  Y      E+A  L  VM  +GV P  VT+ S+
Sbjct: 1471 SPQDARKVFEGMD--QRNVVLWSAMLGVYVFHKQEEQAFGLWRVMGLEGVEPDAVTFLSL 1528

Query: 345  LRKLCKEG 352
            L   C  G
Sbjct: 1529 LTMCCHAG 1536



 Score = 38.9 bits (89), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 41/199 (20%), Positives = 74/199 (37%), Gaps = 17/199 (8%)

Query: 394 KVKNRMLEAGLMLDQFTYKALIHG-----FC---------KAKEMDIAKELLFGMLDAGF 439
           KV  R+++ G  L  F +     G     FC         KA +   A +L    ++  +
Sbjct: 98  KVLQRLIDPGAALVFFEWAETRDGYQHEIFCCNCLLNVLVKAHQYSQAHDLFRSRIEGQW 157

Query: 440 SPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQR 499
                +YS L+ G+          +L DE   +GL     V+++++R  C   +   A  
Sbjct: 158 GGDTVTYSTLISGFIRAGKILPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVL 217

Query: 500 LFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYA 559
            F  M       DSV Y ++     ++        +L++M        +  Y +    + 
Sbjct: 218 HFREMSKT-CPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFC 276

Query: 560 KDNEILDLFW--SHVVDRG 576
           K N + +  W    +V RG
Sbjct: 277 KANRVENALWLLEQMVTRG 295


>gi|449440401|ref|XP_004137973.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Cucumis sativus]
          Length = 606

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 142/545 (26%), Positives = 262/545 (48%), Gaps = 16/545 (2%)

Query: 32  PNIASSLTSTAIHKVLLNLYNCCHIPSLSC-AFFKWAESAVPNYKHSLQSHWTMIHILTK 90
           P++ S+  S  +  VL +     ++P+ SC  FF +     P+ K  L +H  +   L +
Sbjct: 26  PSLLSNFDSRVMQLVLSD----PNLPTRSCLRFFDFLRQN-PSRKPDLPAHLILFSRLYR 80

Query: 91  NKHFKSAQNMLEKIALRDFL--STPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQD 148
            + F   +N+L+ I     L  +   +++++    ++P         L   Y + +M   
Sbjct: 81  ARKFAEMKNVLKFIVNDGNLWSNVERIVSSIGGEFNEPSIVEKFCDMLFRVYMDNRMFDS 140

Query: 149 GLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIH 208
            L+VFD  R         +C   L +L +    ++  +  ++MV  G+   +  +  ++ 
Sbjct: 141 SLEVFDYARKKGFEIDERSCFEFLLALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVD 200

Query: 209 ACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCK---KGMHYEALAVQDRMEREG 265
             CK  +V + + L+ E+  K  +  + TYNTL+  Y +    G   E L++   ME+  
Sbjct: 201 GLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSL---MEKNV 257

Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEAL 323
           +  ++ TY  LI  + R  ++ EA +LF ++  KG  P+   YT++I+  C+  +++ A 
Sbjct: 258 VDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAF 317

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
            L + M  + + P   TY +++   CK G ++ A  ++N+M  K +  + V  NTL++ Y
Sbjct: 318 VLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGY 377

Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY 443
           CK G    A++++N M + G  +D FT   +  GFC++   + AK LL  M + G +P+ 
Sbjct: 378 CKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNV 437

Query: 444 CSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNL 503
            S+S L+D YC + N     +L      +G    V  Y A I R+CKK K++ A +L N 
Sbjct: 438 VSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINE 497

Query: 504 MQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNE 563
           MQ  G++ D+  YTSL      +G      ++ ++M +  L   +  Y    +  +KD  
Sbjct: 498 MQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGR 557

Query: 564 ILDLF 568
             + F
Sbjct: 558 ADEAF 562



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 119/378 (31%), Positives = 189/378 (50%), Gaps = 2/378 (0%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           + D++      P +     LLN   + +    V ++   M +  V  N+  Y +LI    
Sbjct: 214 LMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYS 273

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           +SS +++ EKL  EM  K +  D++ Y ++I   CK G    A  + D M    + P+  
Sbjct: 274 RSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAY 333

Query: 272 TYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           TY +LI+G C+ G M+ A  +  D+  KG   N V + TL+DGYC+   ++EALRL+ +M
Sbjct: 334 TYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIM 393

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
             KG      T N I    C+  R  +A RLL  M E+ +AP+ V+ + LI+ YCK  + 
Sbjct: 394 QQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNF 453

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
           A A ++   M + G      TY A I  +CK  +M+ A +L+  M + G  P   +Y+ L
Sbjct: 454 AEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSL 513

Query: 450 VDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGI 509
           +DG     N +  L+L +E    GL  +V  Y  +I    K  + D A +L++ M   GI
Sbjct: 514 IDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGI 573

Query: 510 LGDSVIYTSLAYAYWRAG 527
           + D  IY+SL  +  + G
Sbjct: 574 VPDDGIYSSLIASLHKVG 591



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/152 (25%), Positives = 66/152 (43%)

Query: 133 LSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMV 192
            S L+  Y   +   +  ++F  M      P +      +    K    +  +K+  +M 
Sbjct: 440 FSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQ 499

Query: 193 QLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHY 252
           + G++ + + Y  LI     S +VD+  +L  EM    +  ++ TY  +I+   K G   
Sbjct: 500 ERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRAD 559

Query: 253 EALAVQDRMEREGISPDIVTYNSLIHGFCREG 284
           EA  + D M +EGI PD   Y+SLI    + G
Sbjct: 560 EAFKLYDEMNKEGIVPDDGIYSSLIASLHKVG 591


>gi|449527621|ref|XP_004170808.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g13630-like [Cucumis
           sativus]
          Length = 830

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 155/604 (25%), Positives = 266/604 (44%), Gaps = 78/604 (12%)

Query: 33  NIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNK 92
            + S+L+ T +  VL  L      P ++ AFF +  +    ++HS+ S + + HIL    
Sbjct: 75  TVVSTLSETVVDGVLDRLRTL--KPDVAVAFFYFLINEY-GFRHSIFSQFVVSHILAGKG 131

Query: 93  HFKSAQNMLEKIALRDFLSTPSVL-NALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQ 151
            FK   ++++ + +   L + S++ + L++   + D N  V   L   Y+  +M  D L 
Sbjct: 132 RFKELDSVIKNLIVDQGLGSASIICDLLLEKFRNWDSNGLVWDMLAFAYSRHEMIHDALF 191

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           V  +M+  N    +     LL+++   R TD++W VY ++   G   +    ++LIH  C
Sbjct: 192 VIAKMKDLNFQASVPTYNSLLHNM---RHTDIMWDVYNEIKVSGAPQSECTTSILIHGLC 248

Query: 212 KSSD----------------------------------VDKVEKLLCEMEFKDVRADLFT 237
           + S                                   +D      C M    +  D F+
Sbjct: 249 EQSKLEDAISFLHDSNKVVGPSIVSINTIMSKFCKVGLIDVARSXFCLMVKNGLLHDSFS 308

Query: 238 YNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD-- 295
           YN L+   C  G   EAL   D ME+ G+ PD+VTYN+L  GF   G M  AR++ +   
Sbjct: 309 YNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKML 368

Query: 296 IKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIR 355
           ++G  P+ VTYTTLI G+C+  ++EEAL+LR+   ++G    V+ YN +L  LCK GRI 
Sbjct: 369 LQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIE 428

Query: 356 DANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRM---------------- 399
           +A  L +EM   ++ PD +  + LI+  CK G    A ++  +M                
Sbjct: 429 EALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVL 488

Query: 400 -------------------LEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFS 440
                                  LM D   Y  +I G+ +   +  A +L + M++ G +
Sbjct: 489 LGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGIT 548

Query: 441 PSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRL 500
           PS  +++ L++G+C + +     K+L+    +GL   V  Y  L+  +C+   +      
Sbjct: 549 PSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHF 608

Query: 501 FNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAK 560
            + M+ N ++   V YT L     R  +      +L+ MY + L+     Y +    + K
Sbjct: 609 LHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCK 668

Query: 561 DNEI 564
             EI
Sbjct: 669 GKEI 672



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 104/392 (26%), Positives = 194/392 (49%), Gaps = 2/392 (0%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           ++ L +FD+M    L P     ++L++ L K+      +++Y++M       +      +
Sbjct: 428 EEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAV 487

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           +    K+ ++ +           D+  D+  YN +I  Y +     EA+ +  +M   GI
Sbjct: 488 LLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGI 547

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
           +P +VT+N+LI+GFCR G + EAR++   I  KG  P+ VTYTTL++ YC   +++E   
Sbjct: 548 TPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFH 607

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
               M A  V P  VTY  +++ LC++ ++ ++ +LL  M  K + PD+VT NT+I  +C
Sbjct: 608 FLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFC 667

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           K  +   A+++ N ML       Q TYK LI+  C   ++     ++  + D   +    
Sbjct: 668 KGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKX 727

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
           +Y  ++  +C K      L   ++ +++G  + +  Y A+I R CK+  +  A+  F +M
Sbjct: 728 TYMTIIKAHCAKGQVSKALGYFNQMLAKGFVISIRDYSAVINRLCKRGLITEAKYFFVMM 787

Query: 505 QGNGILGDSVIYTSLAYAYWRAGEPKACSDIL 536
              G+  D  I  ++  A+ + G   +  + L
Sbjct: 788 LSEGVTPDPEICKTVLNAFHQQGNNSSVFEFL 819



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 114/423 (26%), Positives = 198/423 (46%), Gaps = 10/423 (2%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKD----RLTDMVWKVYKKMVQLGVVANIHLY 203
           + L   D M  H + P +    V  N+LAK      L     KV +KM+  G+  ++  Y
Sbjct: 324 EALGFTDDMEKHGVEPDV----VTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTY 379

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER 263
             LI   C+  ++++  KL  E   +  + ++  YN L++  CK G   EAL + D ME 
Sbjct: 380 TTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMET 439

Query: 264 EGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEE 321
             + PD + Y+ LIHG C+EG ++ A +L+    +K   P+H     ++ G  +  ++ E
Sbjct: 440 LRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISE 499

Query: 322 ALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
           A    +      +   VV YN ++    +   I +A +L  +M E+ I P  VT NTLIN
Sbjct: 500 ARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLIN 559

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
            +C+ GD   A K+   +   GL+    TY  L++ +C+   M      L  M      P
Sbjct: 560 GFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVP 619

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
           ++ +Y+ L+ G C +N     L+LL+   ++GL  D   Y  +I+ FCK +++  A +L+
Sbjct: 620 THVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLY 679

Query: 502 NLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKD 561
           N+M  +      V Y  L  A    G+ K    ++  +  R + +    Y +   ++   
Sbjct: 680 NMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKXTYMTIIKAHCAK 739

Query: 562 NEI 564
            ++
Sbjct: 740 GQV 742



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 97/366 (26%), Positives = 166/366 (45%), Gaps = 37/366 (10%)

Query: 146 TQDGLQVFDQMRVHNLMPHLHACTVLLNSLAK-----------------DRLTDMV---- 184
            Q   Q+++QMR+    PH  A   +L  L K                 D + D+V    
Sbjct: 462 VQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNI 521

Query: 185 --------------WKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKD 230
                          ++Y KM++ G+  ++  +N LI+  C+  D+ +  K+L  +  K 
Sbjct: 522 MIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKG 581

Query: 231 VRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREAR 290
           +   + TY TL+  YC+ G   E       ME   + P  VTY  LI G CR+ +M E+ 
Sbjct: 582 LVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESL 641

Query: 291 RLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
           +L   +  KG  P+ VTY T+I  +C+  ++ +AL+L  +M      P  VTY  ++  L
Sbjct: 642 QLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINAL 701

Query: 349 CKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ 408
           C  G ++D +R++  + ++ I     T  T+I A+C  G  + A+   N+ML  G ++  
Sbjct: 702 CIFGDLKDVDRMVVSIEDRNITLKKXTYMTIIKAHCAKGQVSKALGYFNQMLAKGFVISI 761

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
             Y A+I+  CK   +  AK     ML  G +P       +++ +  + N  ++ + L  
Sbjct: 762 RDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPDPEICKTVLNAFHQQGNNSSVFEFLAM 821

Query: 469 FVSRGL 474
            V  G 
Sbjct: 822 VVKSGF 827



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 92/350 (26%), Positives = 165/350 (47%), Gaps = 14/350 (4%)

Query: 222 LLCEM---EFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIH 278
           ++C++   +F++  ++   ++ L   Y +  M ++AL V  +M+       + TYNSL+H
Sbjct: 154 IICDLLLEKFRNWDSNGLVWDMLAFAYSRHEMIHDALFVIAKMKDLNFQASVPTYNSLLH 213

Query: 279 GFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGV 338
                  M +     + + GA  +  T + LI G C  + LE+A+      + K V P +
Sbjct: 214 NMRHTDIMWDVYNEIK-VSGAPQSECTTSILIHGLCEQSKLEDAISFLHD-SNKVVGPSI 271

Query: 339 VTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNR 398
           V+ N+I+ K CK G I  A      M +  +  D+ + N L++  C  G    A+   + 
Sbjct: 272 VSINTIMSKFCKVGLIDVARSXFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDD 331

Query: 399 MLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNN 458
           M + G+  D  TY  L  GF     M  A++++  ML  G +P   +Y+ L+ G+C   N
Sbjct: 332 MEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGN 391

Query: 459 EEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTS 518
            E  LKL  E +SRG  ++V  Y  L+   CK  +++ A  LF+ M+   +  D ++Y+ 
Sbjct: 392 IEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSI 451

Query: 519 LAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLF 568
           L +   + G  +    + + M         ++ R F   +A+   +L LF
Sbjct: 452 LIHGLCKEGFVQRAYQLYEQM---------RLKRKFPHHFAQRAVLLGLF 492



 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 123/257 (47%), Gaps = 2/257 (0%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           ++ + +R+  L+P +   T L+N+  +      ++    +M    VV     Y VLI   
Sbjct: 572 KMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGL 631

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           C+ + + +  +LL  M  K +  D  TYNT+I  +CK     +AL + + M      P  
Sbjct: 632 CRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQ 691

Query: 271 VTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
           VTY  LI+  C  G +++  R+   I  +  T    TY T+I  +C    + +AL     
Sbjct: 692 VTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKXTYMTIIKAHCAKGQVSKALGYFNQ 751

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M AKG    +  Y++++ +LCK G I +A      M  + + PD   C T++NA+ + G+
Sbjct: 752 MLAKGFVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPDPEICKTVLNAFHQQGN 811

Query: 389 TASAMKVKNRMLEAGLM 405
            +S  +    ++++G +
Sbjct: 812 NSSVFEFLAMVVKSGFI 828


>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
 gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
          Length = 1059

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 128/441 (29%), Positives = 213/441 (48%), Gaps = 37/441 (8%)

Query: 148  DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
            D   +F +M     +P +   T +L ++AK    D+V  ++ KM  LG+  +++ + +LI
Sbjct: 598  DAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILI 657

Query: 208  HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRM------ 261
            H  C+ S       LL +M     +  + T  +L+  +C+     EA+++ D M      
Sbjct: 658  HCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLE 717

Query: 262  -----------------------------EREGISPDIVTYNSLIHGFCREGRMREARRL 292
                                         E++GI  D VTYN+LI G C  GR  +A RL
Sbjct: 718  PNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARL 777

Query: 293  FRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
             RD+  +   PN + +T LID + +  +L EA  L + M  + V+P ++TYNS++   C 
Sbjct: 778  LRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCI 837

Query: 351  EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
            +GR+ DA  + + M  K   PD VT NTLI  +CK       MK+   M   GL+ D FT
Sbjct: 838  QGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFT 897

Query: 411  YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFV 470
            Y  LIHG+C+A ++++A+++   M+D G  P   +Y+ L+D  CN    E  L ++++  
Sbjct: 898  YNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQ 957

Query: 471  SRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPK 530
               + VD+  Y  +I+  C+ +KV  A  LF  +   G+  D++ Y ++     R G  +
Sbjct: 958  KNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRR 1017

Query: 531  ACSDILDDMYRRRLMITLKIY 551
                +   M     M + +IY
Sbjct: 1018 EADKLCTRMKEDGFMPSERIY 1038



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 121/413 (29%), Positives = 206/413 (49%), Gaps = 7/413 (1%)

Query: 133 LSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMV 192
            + L+   ANL+  +  +    QM +  +   L++ T+L++   +     +   +  KM+
Sbjct: 68  FTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTILIHCFCRCSRLSLALSILGKMM 127

Query: 193 QLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHY 252
           +LG   +I  +  L+H  C  + +     L+  M       ++  YNTLI   CK G   
Sbjct: 128 KLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVN 187

Query: 253 EALAVQDRMEREG-ISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTL 309
            AL + + ME++G ++ D+VTYN+L+ G C  G  R+A R+ RD+  +   P+  T+T L
Sbjct: 188 IALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTAL 247

Query: 310 IDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI 369
           ID + +  +L+EA  L + M    + P  VTYNS++  LC  GR+  A +  + M  K  
Sbjct: 248 IDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGC 307

Query: 370 APDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKE 429
            P+ VT NTLIN +CK       MK+  RM   GL+ D FTY  LIHG+C+  ++ +AK+
Sbjct: 308 FPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKD 367

Query: 430 LLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFC 489
           +   M+  G +P   ++  L+ G C      + +   ++  S    + +  Y  +I   C
Sbjct: 368 IFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLC 427

Query: 490 KKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRR 542
           K +KV+ A  LF  +   G+  D+  YT +     + G  +      D+++RR
Sbjct: 428 KADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREA----DELFRR 476



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 114/385 (29%), Positives = 194/385 (50%), Gaps = 2/385 (0%)

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
           D  + ++ +M+Q   + +I  +  ++ A  K +  D V  L  +ME   +  DL+++  L
Sbjct: 597 DDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTIL 656

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GA 299
           I  +C+      ALA+  +M + G  P IVT  SL++GFC+  R +EA  L   +   G 
Sbjct: 657 IHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGL 716

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
            PN V Y T+I+G C+  DL  AL +   M  KG+    VTYN+++  LC  GR  DA R
Sbjct: 717 EPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAAR 776

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
           LL +M ++KI P+ +    LI+ + K G+   A  +   M+   +  +  TY +LI+GFC
Sbjct: 777 LLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFC 836

Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
               +  AK +   M+  G  P   +Y+ L+ G+C     E  +KL  E   +GL  D  
Sbjct: 837 IQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAF 896

Query: 480 VYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
            Y  LI  +C+  K++ AQ++FN M   G+  D V Y  L       G+ +    +++D+
Sbjct: 897 TYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDL 956

Query: 540 YRRRLMITLKIYRSFSASYAKDNEI 564
            + ++ + +  Y        +++++
Sbjct: 957 QKNQMDVDIITYNIIIQGMCRNDKV 981



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 108/413 (26%), Positives = 189/413 (45%), Gaps = 19/413 (4%)

Query: 76   HSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSW 135
            H L S   +IH   +   F  A  +L K+    F   PS++     ++    GN      
Sbjct: 648  HDLYSFTILIHCFCRCSRFSLALALLGKMMKLGF--QPSIVTLGSLLNGFCQGNRF---- 701

Query: 136  LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
                       Q+ + + D M    L P++     ++N L K+R  +   +++  M + G
Sbjct: 702  -----------QEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKG 750

Query: 196  VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
            +VA+   YN LI   C S       +LL +M  + +  ++  +  LI  + K+G   EA 
Sbjct: 751  IVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAK 810

Query: 256  AVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGY 313
             +   M R  + P+I+TYNSLI+GFC +GR+ +A+ +F  +  KG  P+ VTY TLI G+
Sbjct: 811  NLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGF 870

Query: 314  CRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDN 373
            C++  +E+ ++L   M  +G+     TYN+++   C+ G++  A ++ N M +  + PD 
Sbjct: 871  CKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDI 930

Query: 374  VTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFG 433
            VT N L++  C  G    A+ +   + +  + +D  TY  +I G C+  ++  A  L   
Sbjct: 931  VTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRS 990

Query: 434  MLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
            +   G      +Y  ++ G C         KL       G      +Y   +R
Sbjct: 991  LTRKGVKLDAIAYITMISGLCRNGLRREADKLCTRMKEDGFMPSERIYDETLR 1043



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 76/257 (29%), Positives = 128/257 (49%), Gaps = 2/257 (0%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           ++   M    + P +   T L+++  K    D   ++YK+M+Q  +  N   YN LI+  
Sbjct: 227 RILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGL 286

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           C    +   +K    M  K    ++ TYNTLI  +CK     + + +  RM REG+  D 
Sbjct: 287 CMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDT 346

Query: 271 VTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREV 328
            TYN+LIHG+C+ G++R A+ +F  +   G TP+ +T+  L+ G C   ++  A+     
Sbjct: 347 FTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFND 406

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M +   Y G+V YN ++  LCK  ++ +A  L   +  + + PD  T   +I   CK G 
Sbjct: 407 MRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGP 466

Query: 389 TASAMKVKNRMLEAGLM 405
              A ++  RM E G++
Sbjct: 467 RREADELFRRMKEDGII 483



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 115/536 (21%), Positives = 206/536 (38%), Gaps = 108/536 (20%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           + FD M      P++     L+N   K R  +   K++++M + G+V +   YN LIH  
Sbjct: 297 KTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGY 356

Query: 211 CKSSDVDKVEKLLCEM------------------------------EFKDVRAD-----L 235
           C+   +   + +   M                              +F D+R+      +
Sbjct: 357 CQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGI 416

Query: 236 FTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREG----------R 285
             YN +I   CK     EA  +  R+  EG+ PD  TY  +I G C+ G          R
Sbjct: 417 VAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFRR 476

Query: 286 MREARRLFRDIKG-----ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVT 340
           M+E   + +   G      T N V+  T+I    R   + E+  L    +   ++  +V 
Sbjct: 477 MKEDGIICQAEDGHLGEHGTNNQVSLGTIIICPKRRRSIMESGDLYYYYSDTTLWSSLVG 536

Query: 341 YNSILRKLCKEGRIR--------------------------------------------- 355
              I      +G +R                                             
Sbjct: 537 LIPIASSSSVKGFVRRHLLLLERGNNPESRSFSGASHHHHHHHHHHYRERLRSELHCIKF 596

Query: 356 -DANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKAL 414
            DA  L  EM + +  P  V    ++ A  K+      + + ++M   G+  D +++  L
Sbjct: 597 DDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTIL 656

Query: 415 IHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGL 474
           IH FC+     +A  LL  M+  GF PS  +   L++G+C  N  +  + L+D     GL
Sbjct: 657 IHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGL 716

Query: 475 CVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSD 534
             +V +Y  +I   CK   ++ A  +F  M+  GI+ D+V Y +L      +G     + 
Sbjct: 717 EPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAAR 776

Query: 535 ILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKEMQLRN 590
           +L DM +R++   +  + +   ++ K+  +L+            +K+++KEM  R+
Sbjct: 777 LLRDMVKRKIDPNVIFFTALIDTFVKEGNLLE------------AKNLYKEMIRRS 820



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 77/255 (30%), Positives = 124/255 (48%), Gaps = 2/255 (0%)

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
           ++ + M +  +  ++  +  LI A  K  ++D+ ++L  +M    +  +  TYN+LI   
Sbjct: 227 RILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGL 286

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNH 303
           C  G  Y A    D M  +G  P++VTYN+LI+GFC+  R+ +  +LF+ +  +G   + 
Sbjct: 287 CMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDT 346

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
            TY TLI GYC+   L  A  +   M + GV P ++T+  +L  LC  G I  A    N+
Sbjct: 347 FTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFND 406

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
           M   +     V  N +I+  CK      A ++  R+   G+  D  TY  +I G CK   
Sbjct: 407 MRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGP 466

Query: 424 MDIAKELLFGMLDAG 438
              A EL   M + G
Sbjct: 467 RREADELFRRMKEDG 481



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 61/266 (22%), Positives = 115/266 (43%)

Query: 301 PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRL 360
           P+ V +T ++    + N  +  + L   M   G+   + ++  ++   C+  R   A  L
Sbjct: 613 PSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLALAL 672

Query: 361 LNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCK 420
           L +M +    P  VT  +L+N +C+      A+ + + M E GL  +   Y  +I+G CK
Sbjct: 673 LGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCK 732

Query: 421 AKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSV 480
            ++++ A E+ +GM   G      +Y+ L+ G CN        +LL + V R +  +V  
Sbjct: 733 NRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIF 792

Query: 481 YRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMY 540
           + ALI  F K+  +  A+ L+  M    +  + + Y SL   +   G       + D M 
Sbjct: 793 FTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMV 852

Query: 541 RRRLMITLKIYRSFSASYAKDNEILD 566
            +     +  Y +    + K   + D
Sbjct: 853 SKGCFPDVVTYNTLITGFCKSKRVED 878



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 96/213 (45%), Gaps = 1/213 (0%)

Query: 353 RIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYK 412
           R  DA  L  EM + +  P  V    L+ A   +    + +    +M   G+  D +++ 
Sbjct: 45  RFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFT 104

Query: 413 ALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSR 472
            LIH FC+   + +A  +L  M+  G+ PS  ++  L+ G+C +N       L+   V  
Sbjct: 105 ILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKS 164

Query: 473 GLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGIL-GDSVIYTSLAYAYWRAGEPKA 531
           G   +V VY  LI   CK   V+ A  L N M+  G L  D V Y +L      +GE + 
Sbjct: 165 GYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQ 224

Query: 532 CSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
            + IL DM +RR+   +  + +   ++ K   +
Sbjct: 225 AARILRDMTKRRINPDVFTFTALIDAFVKQGNL 257



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/291 (23%), Positives = 119/291 (40%), Gaps = 3/291 (1%)

Query: 279 GFCREGRMREARRLFRDIKGATP--NHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYP 336
           GF    R  +A  LF ++  + P  + V +T L+         E  +   + M   G+  
Sbjct: 39  GFLHSIRFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISH 98

Query: 337 GVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVK 396
            + ++  ++   C+  R+  A  +L +M +    P  VT  +L++ +C       A  + 
Sbjct: 99  DLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLV 158

Query: 397 NRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAG-FSPSYCSYSWLVDGYCN 455
             M+++G   +   Y  LI   CK  +++IA ELL  M   G  +    +Y+ L+ G C 
Sbjct: 159 ASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCY 218

Query: 456 KNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVI 515
                   ++L +   R +  DV  + ALI  F K+  +D AQ L+  M  + I  ++V 
Sbjct: 219 SGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVT 278

Query: 516 YTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
           Y SL       G         D M  +     +  Y +    + K   + D
Sbjct: 279 YNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVED 329


>gi|359474464|ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
 gi|297742067|emb|CBI33854.3| unnamed protein product [Vitis vinifera]
          Length = 767

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 122/436 (27%), Positives = 215/436 (49%), Gaps = 4/436 (0%)

Query: 146 TQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNV 205
           T+   ++ ++M  +   P +   +  +  L +    +      + ++    + N++ YN 
Sbjct: 271 TRQATEILEEMERNGESPTVVTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNA 330

Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
           +IH  CK  ++D+  K+L EM+   +  D++TY+ LI  +CK+G   + L + + M+   
Sbjct: 331 IIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSN 390

Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEAL 323
           + P +V+Y+SL HG C++     +  +FRD+   G   +   Y+ LI G+C   DL+ A 
Sbjct: 391 MEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAH 450

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
           +L E M    + P    + S++   CK G   +A    N M E  I P   TCN +I+A+
Sbjct: 451 KLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAH 510

Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY 443
           C+ G    A+ + N M   G+  + FTY A+I+  CK ++ + A EL   ML     PS 
Sbjct: 511 CREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSV 570

Query: 444 CSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNL 503
             YS L+DG+  ++N +  L L    +  G+  D+  Y  LI   C + ++  A  LF  
Sbjct: 571 VVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKK 630

Query: 504 MQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDN- 562
           M  NG+  D + YTS+   + R G+ +    + ++M +R  + T+  Y S    Y K N 
Sbjct: 631 MTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGYCKMNR 690

Query: 563 -EILDLFWSHVVDRGL 577
            +I D+    +  +G+
Sbjct: 691 IDIADMLIDEMKRKGI 706



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 118/378 (31%), Positives = 188/378 (49%), Gaps = 2/378 (0%)

Query: 146 TQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNV 205
            + GL + ++M+  N+ P L + + L + L K RL+D+   +++ +   G   +   Y++
Sbjct: 376 VEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSI 435

Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
           LI   C   D+D   KL+ EM   ++  D   + +L+  +CK G+   AL   + M   G
Sbjct: 436 LIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGG 495

Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEAL 323
           I P I T N +I   CREGR+ EA  L  +++  G  PN  TY  +I+  C+    E AL
Sbjct: 496 ILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERAL 555

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
            L  +M  + V P VV Y++++    K+   + A  L   M +  + PD V    LIN  
Sbjct: 556 ELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINIL 615

Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY 443
           C       A  +  +M E G+  D+ +Y ++I GFC+  +M  A  L   ML  G  P+ 
Sbjct: 616 CHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTV 675

Query: 444 CSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNL 503
            +Y+ LVDGYC  N  +    L+DE   +G+  DV  Y  LI    ++  +D A  + N 
Sbjct: 676 VTYTSLVDGYCKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRRGNLDKALEMLNE 735

Query: 504 MQGNGILGDSVIYTSLAY 521
           M+ NG+L D + Y  L +
Sbjct: 736 MKENGVLPDHMTYMMLEW 753



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 117/417 (28%), Positives = 197/417 (47%), Gaps = 37/417 (8%)

Query: 160 NLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKV 219
           N + +++    +++ L K    D   KV ++M   G+  +++ Y++LIH  CK  DV+K 
Sbjct: 320 NGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKG 379

Query: 220 EKLLCEMEFKDVRADLFTYNTLIALYCKK----------------GMHYEALA------- 256
             L+ EM++ ++   L +Y++L    CKK                G  Y+  A       
Sbjct: 380 LYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKG 439

Query: 257 ------------VQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPN 302
                       + + M R  ++PD   + SL+HGFC+ G    A   F  +   G  P+
Sbjct: 440 FCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPS 499

Query: 303 HVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLN 362
             T   +ID +CR   +EEAL L   M  +G++P + TYN+++ +LCKE +   A  L  
Sbjct: 500 IATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFP 559

Query: 363 EMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAK 422
            M ++ + P  V  +TLI+ + K  ++  A+ +  RML+ G+  D   Y  LI+  C   
Sbjct: 560 LMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRS 619

Query: 423 EMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYR 482
            M  A  L   M + G +P   SY+ ++ G+C   +      L +E + RG    V  Y 
Sbjct: 620 RMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYT 679

Query: 483 ALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
           +L+  +CK  ++D A  L + M+  GI  D V Y  L  A+ R G      ++L++M
Sbjct: 680 SLVDGYCKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRRGNLDKALEMLNEM 736



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 102/354 (28%), Positives = 177/354 (50%), Gaps = 20/354 (5%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHV 132
            YK+   ++  +I          SA  ++E++   +    PS   +LV       G   +
Sbjct: 425 GYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVH------GFCKM 478

Query: 133 LSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMV 192
             W+           + L+ F+ M    ++P +  C V++++  ++   +    +  +M 
Sbjct: 479 GLWV-----------NALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQ 527

Query: 193 QLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHY 252
             G+  N+  YN +I+  CK    ++  +L   M  ++V   +  Y+TLI  + K+    
Sbjct: 528 TQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQ 587

Query: 253 EALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLI 310
           +AL +  RM + G++PD+V Y  LI+  C   RM EA  LF+ +   G TP+ ++YT++I
Sbjct: 588 KALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVI 647

Query: 311 DGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIA 370
            G+CR  D+ +A  L   M  +G  P VVTY S++   CK  RI  A+ L++EM  K I 
Sbjct: 648 AGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGIT 707

Query: 371 PDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEM 424
           PD VT N LI A+ + G+   A+++ N M E G++ D  TY  ++    KAK++
Sbjct: 708 PDVVTYNVLIAAHRRRGNLDKALEMLNEMKENGVLPDHMTY-MMLEWLLKAKKL 760



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 86/304 (28%), Positives = 156/304 (51%), Gaps = 10/304 (3%)

Query: 259 DRMEREGISPDIVTYNSLIHGFCR------EGRMREARRLFRDIK--GATPNHVTYTTLI 310
           + M+  G  P++ TY  +++ +C+      +   R+A  +  +++  G +P  VTY+T I
Sbjct: 238 EEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYSTYI 297

Query: 311 DGYCRANDLEEALR-LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI 369
            G CR   +E AL  +R +++A G+   V  YN+I+  LCK+G + +A ++L EM    I
Sbjct: 298 YGLCRVGYVESALDFVRSLISANGLV-NVYCYNAIIHGLCKKGELDEALKVLEEMKSCGI 356

Query: 370 APDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKE 429
           +PD  T + LI+ +CK GD    + +   M  + +     +Y +L HG CK +  DI+ +
Sbjct: 357 SPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLD 416

Query: 430 LLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFC 489
           +   +  AG+     +YS L+ G+C + + ++  KL++E V   L  D S + +L+  FC
Sbjct: 417 IFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFC 476

Query: 490 KKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLK 549
           K      A   FN+M   GIL        +  A+ R G  +   +++++M  + +   L 
Sbjct: 477 KMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLF 536

Query: 550 IYRS 553
            Y +
Sbjct: 537 TYNA 540



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 77/310 (24%), Positives = 126/310 (40%), Gaps = 34/310 (10%)

Query: 261 MEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI----------------------KG 298
           M++ G S  I  + ++++     G   E   L RDI                      K 
Sbjct: 115 MKKYGFSRSIDAFRTVVNVLALAGMHMEVYALLRDIVCYYNKVNLDAFELFPILLESPKD 174

Query: 299 ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDAN 358
           A  + + +  LI  +   + LE A+ +       G+     + N +L+ L +  R     
Sbjct: 175 AARSVIVFDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEANRREFLR 234

Query: 359 RLLNEMNEKKIAPDNVTCNTLINAYCKIG------DTASAMKVKNRMLEAGLMLDQFTYK 412
            L  EM      P+  T   ++N YCK        DT  A ++   M   G      TY 
Sbjct: 235 SLFEEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYS 294

Query: 413 ALIHGFCKAKEMDIAKELLFGMLDA-GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
             I+G C+   ++ A + +  ++ A G    YC Y+ ++ G C K   +  LK+L+E  S
Sbjct: 295 TYIYGLCRVGYVESALDFVRSLISANGLVNVYC-YNAIIHGLCKKGELDEALKVLEEMKS 353

Query: 472 RGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKA 531
            G+  DV  Y  LI  FCK+  V+    L   M+ + +    V Y+SL +   +    K 
Sbjct: 354 CGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCK----KR 409

Query: 532 CSDILDDMYR 541
            SDI  D++R
Sbjct: 410 LSDISLDIFR 419


>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 584

 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 120/357 (33%), Positives = 188/357 (52%), Gaps = 2/357 (0%)

Query: 155 QMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSS 214
           ++R     P++   T L++   K    +    ++ +M + G+VAN   Y VLIH   K+ 
Sbjct: 188 ELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNG 247

Query: 215 DVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYN 274
              +  ++  +M+   V  +L TYN ++   CK G   +A  V D M   G+S +IVTYN
Sbjct: 248 IKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYN 307

Query: 275 SLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAK 332
           +LI G CRE +  EA  +   +K  G  PN +TY TLIDG+C    L +AL L   + ++
Sbjct: 308 TLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSR 367

Query: 333 GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
           G+ P +VTYN ++   CK+G    A +++ EM E+ I P  VT   LI+ + +  +   A
Sbjct: 368 GLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKA 427

Query: 393 MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
           +++++ M E GL  D  TY  LIHGFC    M+ A  L   M++  F P+   Y+ +V G
Sbjct: 428 IQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLG 487

Query: 453 YCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGI 509
           YC + +    L+L  E   + L  +V+ YR +I   CK+ K   A+ L   M  +GI
Sbjct: 488 YCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDSGI 544



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 100/300 (33%), Positives = 177/300 (59%), Gaps = 2/300 (0%)

Query: 145 MTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYN 204
           + + G +++++M+ H + P+LH    ++N L KD  T   +KV+ +M + GV  NI  YN
Sbjct: 248 IKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYN 307

Query: 205 VLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMERE 264
            LI   C+    ++  +++ +M+   +  +L TYNTLI  +C      +AL++   ++  
Sbjct: 308 TLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSR 367

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEA 322
           G+SP +VTYN L+ GFC++G    A ++ +++  +G  P+ VTYT LID + R++++E+A
Sbjct: 368 GLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKA 427

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
           ++LR  M   G+ P V TY+ ++   C +GR+ +A+RL   M EKK  P+ V  NT++  
Sbjct: 428 IQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLG 487

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           YCK G +  A+++   M E  L  +  +Y+ +I   CK ++   A+ L+  M+D+G  PS
Sbjct: 488 YCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDSGIGPS 547



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 126/515 (24%), Positives = 240/515 (46%), Gaps = 9/515 (1%)

Query: 44  HKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEK 103
            K L+ L N   +P L  AF          ++H+ +S   ++ +L     +  AQ++L +
Sbjct: 6   QKTLILLANLIKVPPLK-AFSLLNSPNFHGFQHTHESISILLRLLLSGNLYSHAQSLLLQ 64

Query: 104 IA----LRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVH 159
           +        F ++ S+L+ L +  +     S +   ++  Y   +     +  F++M   
Sbjct: 65  VISGKIQSQFFTSSSLLHYLTE-SETSKTKSRLYEVIINAYVQSQSLDSSIYYFNEMVDK 123

Query: 160 NLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKV 219
             +P  +    LL  +      +  W  + +  ++ VV +++ + ++I  CC++ +++K 
Sbjct: 124 GFVPGSNCFNNLLTFVVGSSSFNQWWCFFNE-SKIKVVLDVYSFGIVIKGCCEAGEIEKS 182

Query: 220 EKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHG 279
             LL E+       ++  Y TLI   CKKG   +A  +   M + G+  +  TY  LIHG
Sbjct: 183 FDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHG 242

Query: 280 FCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPG 337
             + G  ++   ++  ++  G  PN  TY  +++  C+    ++A ++ + M  +GV   
Sbjct: 243 LFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCN 302

Query: 338 VVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKN 397
           +VTYN+++  LC+E +  +AN ++++M    I P+ +T NTLI+ +C +     A+ +  
Sbjct: 303 IVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCR 362

Query: 398 RMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKN 457
            +   GL     TY  L+ GFCK  +   A +++  M + G  PS  +Y+ L+D +   +
Sbjct: 363 DLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSD 422

Query: 458 NEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYT 517
           N E  ++L       GL  DV  Y  LI  FC K +++ A RLF  M       + VIY 
Sbjct: 423 NMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYN 482

Query: 518 SLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYR 552
           ++   Y + G       +  +M  + L   +  YR
Sbjct: 483 TMVLGYCKEGSSYRALRLFREMEEKELPPNVASYR 517



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 109/395 (27%), Positives = 193/395 (48%), Gaps = 3/395 (0%)

Query: 170 VLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFK 229
           V++N+  + +  D     + +MV  G V   + +N L+     SS  ++      E + K
Sbjct: 99  VIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESKIK 158

Query: 230 DVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA 289
            V  D++++  +I   C+ G   ++  +   +   G SP++V Y +LI G C++G + +A
Sbjct: 159 -VVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKA 217

Query: 290 RRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRK 347
           + LF ++   G   N  TYT LI G  +    ++   + E M   GV+P + TYN ++ +
Sbjct: 218 KDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQ 277

Query: 348 LCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLD 407
           LCK+GR +DA ++ +EM E+ ++ + VT NTLI   C+      A +V ++M   G+  +
Sbjct: 278 LCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPN 337

Query: 408 QFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLD 467
             TY  LI GFC  +++  A  L   +   G SPS  +Y+ LV G+C K +     K++ 
Sbjct: 338 LITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVK 397

Query: 468 EFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
           E   RG+      Y  LI  F + + ++ A +L + M+  G+  D   Y+ L + +   G
Sbjct: 398 EMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKG 457

Query: 528 EPKACSDILDDMYRRRLMITLKIYRSFSASYAKDN 562
                S +   M  ++      IY +    Y K+ 
Sbjct: 458 RMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEG 492



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 74/234 (31%), Positives = 121/234 (51%), Gaps = 2/234 (0%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           +V DQM+   + P+L     L++     R       + + +   G+  ++  YN+L+   
Sbjct: 324 EVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGF 383

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           CK  D     K++ EME + ++    TY  LI  + +     +A+ ++  ME  G++PD+
Sbjct: 384 CKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDV 443

Query: 271 VTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
            TY+ LIHGFC +GRM EA RLF+ +  K   PN V Y T++ GYC+      ALRL   
Sbjct: 444 HTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFRE 503

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
           M  K + P V +Y  ++  LCKE + ++A  L+ +M +  I P +   N +  A
Sbjct: 504 MEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDSGIGPSDSILNLISRA 557



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/133 (24%), Positives = 62/133 (46%)

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           L+  +A     +  +Q+   M    L P +H  +VL++        +   +++K MV+  
Sbjct: 414 LIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKK 473

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
              N  +YN ++   CK     +  +L  EME K++  ++ +Y  +I + CK+    EA 
Sbjct: 474 FEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAE 533

Query: 256 AVQDRMEREGISP 268
            + ++M   GI P
Sbjct: 534 GLVEKMIDSGIGP 546



 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 43/203 (21%), Positives = 77/203 (37%), Gaps = 36/203 (17%)

Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSPS--------------------YC------ 444
           Y+ +I+ + +++ +D +      M+D GF P                     +C      
Sbjct: 97  YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESK 156

Query: 445 --------SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDY 496
                   S+  ++ G C     E    LL E    G   +V +Y  LI   CKK +++ 
Sbjct: 157 IKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEK 216

Query: 497 AQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSA 556
           A+ LF  M   G++ +   YT L +  ++ G  K   ++ + M    +   L  Y     
Sbjct: 217 AKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMN 276

Query: 557 SYAKDNEILDLF--WSHVVDRGL 577
              KD    D F  +  + +RG+
Sbjct: 277 QLCKDGRTKDAFKVFDEMRERGV 299


>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 527

 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 119/412 (28%), Positives = 211/412 (51%), Gaps = 7/412 (1%)

Query: 170 VLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFK 229
            LLN L K   T    K+ + +       N+ +YN +I   CK   V++   L  EM+ +
Sbjct: 120 TLLNGLCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDAR 179

Query: 230 DVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA 289
            +  ++ TY+TLI  +C  G   EA  + + M  + I+P++ TY  L+   C+EG+++EA
Sbjct: 180 GIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEA 239

Query: 290 RRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRK 347
           + L   +  +G  PN V+Y TL+DGYC   +++ A ++   M  KGV P V +YN ++ +
Sbjct: 240 KNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDR 299

Query: 348 LCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLD 407
           LCK  R+ +A  LL E+  K + P+ VT ++LI+ +CK+G   SA+ +   M   G   D
Sbjct: 300 LCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPAD 359

Query: 408 QFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLD 467
             TY +L+   CK + +D A  L   M + G  P+  +Y+ L+DG C     +   KL  
Sbjct: 360 VVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQ 419

Query: 468 EFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
             + +G  ++V  Y  +I   CK+  +D A  + + M+ NG + D+V +  +  + +   
Sbjct: 420 HLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRSLFEKD 479

Query: 528 EPKACSDILDDMYRRRLMITLKIYRSFSASYA-KDNEILDLFWSHVVDRGLM 578
           +      +L +M  + L+     +R F    +  +N+  +     ++ +GL+
Sbjct: 480 QNDKAEKLLHEMIAKDLL----RFRDFHGERSPNENDKAEKLLHEMIAKGLL 527



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 125/415 (30%), Positives = 205/415 (49%), Gaps = 2/415 (0%)

Query: 149 GLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIH 208
            + +F QM+V  + P L    +L+N           + V  K+++LG   N    N L+ 
Sbjct: 29  AISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTVLGKILKLGYQPNTITLNTLMK 88

Query: 209 ACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISP 268
             C   +V K      ++  +  + D  +Y TL+   CK G    AL +   +E     P
Sbjct: 89  GLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGETRSALKLLRMIEDRSTRP 148

Query: 269 DIVTYNSLIHGFCREGRMREARRLFR--DIKGATPNHVTYTTLIDGYCRANDLEEALRLR 326
           ++V YN++I G C++  + EA  L+   D +G  PN +TY+TLI G+C A  L EA  L 
Sbjct: 149 NVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLL 208

Query: 327 EVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKI 386
             M  K + P V TY  ++  LCKEG++++A  LL  M ++ + P+ V+ NTL++ YC I
Sbjct: 209 NEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLI 268

Query: 387 GDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSY 446
           G+  +A ++ + M++ G+  + ++Y  +I   CK+K +D A  LL  +L     P+  +Y
Sbjct: 269 GEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTY 328

Query: 447 SWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQG 506
           S L+DG+C      + L LL E   RG   DV  Y +L+   CK + +D A  LF  M+ 
Sbjct: 329 SSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKE 388

Query: 507 NGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKD 561
            GI  +   YT+L     + G  K    +   +  +   I +  Y    +   K+
Sbjct: 389 RGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKE 443



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 101/364 (27%), Positives = 181/364 (49%), Gaps = 2/364 (0%)

Query: 203 YNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRME 262
           +N ++ +  K         L  +M+ K +  DLFT N LI  +C  G    +  V  ++ 
Sbjct: 13  FNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTVLGKIL 72

Query: 263 REGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLE 320
           + G  P+ +T N+L+ G C +G ++++      +  +G   + V+Y TL++G C+  +  
Sbjct: 73  KLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGETR 132

Query: 321 EALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLI 380
            AL+L  ++  +   P VV YN+I+  LCK+  + +A  L +EM+ + I P+ +T +TLI
Sbjct: 133 SALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLI 192

Query: 381 NAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFS 440
             +C  G    A  + N M+   +  + +TY  L+   CK  ++  AK LL  M   G  
Sbjct: 193 YGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVK 252

Query: 441 PSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRL 500
           P+  SY+ L+DGYC     +   ++    V +G+  +V  Y  +I R CK ++VD A  L
Sbjct: 253 PNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNL 312

Query: 501 FNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAK 560
              +    ++ ++V Y+SL   + + G   +  D+L +MY R     +  Y S   +  K
Sbjct: 313 LREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCK 372

Query: 561 DNEI 564
           +  +
Sbjct: 373 NQNL 376



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 67/273 (24%), Positives = 120/273 (43%), Gaps = 4/273 (1%)

Query: 292 LFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
           L RD    TP  + +  ++    +      A+ L + M  KG+ P + T N ++   C  
Sbjct: 3   LVRD----TPPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHL 58

Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
           G++  +  +L ++ +    P+ +T NTL+   C  G+   ++   ++++  G  +DQ +Y
Sbjct: 59  GQMTFSFTVLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSY 118

Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
             L++G CK  E   A +LL  + D    P+   Y+ ++DG C          L  E  +
Sbjct: 119 ATLLNGLCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDA 178

Query: 472 RGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKA 531
           RG+  +V  Y  LI  FC   ++  A  L N M    I  +   YT L  A  + G+ K 
Sbjct: 179 RGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKE 238

Query: 532 CSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
             ++L  M +  +   +  Y +    Y    E+
Sbjct: 239 AKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEV 271



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 103/236 (43%), Gaps = 29/236 (12%)

Query: 80  SHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIF 139
           S+  MI  L K+K    A N+L ++                 +H +   N+   S L+  
Sbjct: 292 SYNIMIDRLCKSKRVDEAMNLLREV-----------------LHKNMVPNTVTYSSLIDG 334

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
           +  L      L +  +M        +   T LL++L K++  D    ++ KM + G+  N
Sbjct: 335 FCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPN 394

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
            + Y  LI   CK       +KL   +  K  R +++TYN +I+  CK+GM  EALA++ 
Sbjct: 395 KYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKS 454

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRL-----------FRDIKGA-TPNH 303
           +ME  G  PD VT+  +I     + +  +A +L           FRD  G  +PN 
Sbjct: 455 KMEENGCIPDAVTFEIIIRSLFEKDQNDKAEKLLHEMIAKDLLRFRDFHGERSPNE 510


>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
 gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
          Length = 847

 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 120/355 (33%), Positives = 187/355 (52%), Gaps = 4/355 (1%)

Query: 146 TQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNV 205
            Q+  Q   +M     +P       +++   K  +     ++ K  +  G V +   Y  
Sbjct: 200 VQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCS 259

Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
           LI+  C   DV++  +L  E + KD++ DL  YN+L+   C++G+   AL V + M  +G
Sbjct: 260 LINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDG 319

Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEAL 323
             PDI TYN +I+G C+ G + +A  +  D  +KG  P+  T+ T+IDGYC+   L+ AL
Sbjct: 320 CHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSAL 379

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
           +L E M   G+ P  +TYNS+L  LCK G+ ++ N    EM  K   P+ +T N LI  +
Sbjct: 380 QLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENF 439

Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA-GFSPS 442
           CKI     A  V  RM + GL+ D  ++  LIHGFC+  ++D A  LLF  LD  G+S +
Sbjct: 440 CKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAY-LLFQKLDEKGYSAT 498

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYA 497
             +++ L+  Y +K N +   K+  E +S+G   D+  YR L+   CK   VD A
Sbjct: 499 ADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRVLVDGSCKAANVDRA 553



 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 128/441 (29%), Positives = 225/441 (51%), Gaps = 15/441 (3%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D   +FD+M   ++ P +     +L++L +         +  K+++ G+  N    N+ I
Sbjct: 98  DARHLFDEMLRRDVFPDVATFNNVLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWI 157

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
              C+   +++   L+  M+   +  D+ TYNTL+   CK     EA     RM  +G  
Sbjct: 158 RGLCEGGRLEEAVALVESMDAY-IAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCI 216

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEALRL 325
           PD  TYN++I G+C+   ++EA  L +D   KG  P+ VTY +LI+G C   D+E AL L
Sbjct: 217 PDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALEL 276

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
                AK + P +V YNS+++ LC++G I  A +++NEM E    PD  T N +IN  CK
Sbjct: 277 FNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCK 336

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
           +G+ + A  V N  +  G + D FT+  +I G+CK  ++D A +L+  M   G +P   +
Sbjct: 337 MGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAIT 396

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+ +++G C     + + +  +E + +G   +   Y  LI  FCK  +++ A  +   M 
Sbjct: 397 YNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMS 456

Query: 506 GNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEIL 565
            +G++ D++ + +L + + R G+       LD  Y   L+      + +SA+    N ++
Sbjct: 457 QDGLVPDTISFNTLIHGFCRNGD-------LDGAY---LLFQKLDEKGYSATADTFNILI 506

Query: 566 DLFWSHVVDRGLMSKHIFKEM 586
             + S +  +  M++ IF EM
Sbjct: 507 GAYSSKLNMQ--MAEKIFGEM 525



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 113/359 (31%), Positives = 169/359 (47%), Gaps = 2/359 (0%)

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
           +  ++  YN L+   CK S V +  + L  M  +    D FTYNT+I  YCK+ M  EA 
Sbjct: 180 IAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEAT 239

Query: 256 AVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGY 313
            +      +G  PD VTY SLI+G C EG +  A  LF +   K   P+ V Y +L+ G 
Sbjct: 240 ELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGL 299

Query: 314 CRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDN 373
           CR   +  AL++   M   G +P + TYN ++  LCK G I DA  ++N+   K   PD 
Sbjct: 300 CRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDV 359

Query: 374 VTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFG 433
            T NT+I+ YCK     SA+++  RM   G+  D  TY ++++G CKA +     E    
Sbjct: 360 FTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEE 419

Query: 434 MLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEK 493
           M+  G  P+  +Y+ L++ +C  N  E    ++      GL  D   +  LI  FC+   
Sbjct: 420 MILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGD 479

Query: 494 VDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYR 552
           +D A  LF  +   G    +  +  L  AY      +    I  +M  +     L  YR
Sbjct: 480 LDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYR 538



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 113/445 (25%), Positives = 198/445 (44%), Gaps = 36/445 (8%)

Query: 156 MRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC---- 211
           M +    P   A   ++++L      D   KVY +M+  GV  +   + V I + C    
Sbjct: 1   MDLFGCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGR 60

Query: 212 -------------KSSDVDKV------------------EKLLCEMEFKDVRADLFTYNT 240
                        +  DV  +                    L  EM  +DV  D+ T+N 
Sbjct: 61  PHVALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNN 120

Query: 241 LIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKG-A 299
           ++   C+KG   E+ A+  ++ + G+S +  T N  I G C  GR+ EA  L   +    
Sbjct: 121 VLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMDAYI 180

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
            P+ VTY TL+ G C+ + ++EA +    M  +G  P   TYN+I+   CK   +++A  
Sbjct: 181 APDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATE 240

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
           LL +   K   PD VT  +LIN  C  GD   A+++ N      L  D   Y +L+ G C
Sbjct: 241 LLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLC 300

Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
           +   +  A +++  M++ G  P   +Y+ +++G C   N      ++++ + +G   DV 
Sbjct: 301 RQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVF 360

Query: 480 VYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
            +  +I  +CK+ K+D A +L   M   GI  D++ Y S+     +AG+ K  ++  ++M
Sbjct: 361 TFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEM 420

Query: 540 YRRRLMITLKIYRSFSASYAKDNEI 564
             +        Y     ++ K N++
Sbjct: 421 ILKGCRPNAITYNILIENFCKINQL 445



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/307 (23%), Positives = 136/307 (44%), Gaps = 3/307 (0%)

Query: 261 MEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRAND 318
           M+  G  P    YN+++          +A +++  +   G  P+  T+T  I  +C    
Sbjct: 1   MDLFGCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGR 60

Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT 378
              ALRL   +  +G     + Y +++R L   G   DA  L +EM  + + PD  T N 
Sbjct: 61  PHVALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNN 120

Query: 379 LINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAG 438
           +++A C+ GD   +  +  ++L+ G+ +++FT    I G C+   ++ A  L+  M DA 
Sbjct: 121 VLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESM-DAY 179

Query: 439 FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQ 498
            +P   +Y+ L+ G C  +  +   + L   +++G   D   Y  +I  +CK++ +  A 
Sbjct: 180 IAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEAT 239

Query: 499 RLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASY 558
            L       G + D V Y SL       G+ +   ++ ++   + L   L +Y S     
Sbjct: 240 ELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGL 299

Query: 559 AKDNEIL 565
            +   IL
Sbjct: 300 CRQGLIL 306



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 54/254 (21%), Positives = 104/254 (40%), Gaps = 18/254 (7%)

Query: 54  CHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIAL----RDF 109
           C + ++S A     ++ V  Y   + +  TMI    K     SA  ++E++ +     D 
Sbjct: 335 CKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDA 394

Query: 110 LSTPSVLNALVKIHDDPD--------------GNSHVLSWLVIFYANLKMTQDGLQVFDQ 155
           ++  SVLN L K     +               N+   + L+  +  +   ++   V  +
Sbjct: 395 ITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVR 454

Query: 156 MRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSD 215
           M    L+P   +   L++   ++   D  + +++K+ + G  A    +N+LI A     +
Sbjct: 455 MSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLN 514

Query: 216 VDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNS 275
           +   EK+  EM  K  + DL+TY  L+   CK      A      M  +G  P + T+  
Sbjct: 515 MQMAEKIFGEMISKGYKPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSMATFGR 574

Query: 276 LIHGFCREGRMREA 289
           +++      R+ EA
Sbjct: 575 VLNSLAMNHRVSEA 588


>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
 gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
          Length = 707

 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 121/413 (29%), Positives = 199/413 (48%), Gaps = 5/413 (1%)

Query: 156 MRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSD 215
           M    + P +    +L++ L K   TD   ++  +MV  GV  +   +N ++   CK+  
Sbjct: 1   MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60

Query: 216 VDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNS 275
            ++   LL  M  ++ R    TYNTLI+  CK+     A  + D     G  PD+VTY+ 
Sbjct: 61  FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSI 120

Query: 276 LIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKG 333
           L  G C+ GR+ EA  L +++   G TPN VTY TLIDG C+A+  E+A  L E + + G
Sbjct: 121 LADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSG 180

Query: 334 VYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAM 393
             P VVTY  I+  LCKEGR+  A +++  M ++   P  +T   L+   C+ G    A 
Sbjct: 181 FVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAH 240

Query: 394 KVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGY 453
            +   M+      D   Y +L++G+CK+     A++++ G+     +P    Y+ L+DGY
Sbjct: 241 HIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRG---TPYIDVYNALMDGY 297

Query: 454 CNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDS 513
           C +   + +  + ++   RG   ++  Y  ++   CK  KVD A      M   G + D 
Sbjct: 298 CKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDV 357

Query: 514 VIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
           V Y  +    ++A +PK    +LD M +  +      Y +  A + K+    D
Sbjct: 358 VSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDD 410



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 132/410 (32%), Positives = 202/410 (49%), Gaps = 14/410 (3%)

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           LV  Y     T++  +V D +R     P++     L++   K+   D +  V++ M   G
Sbjct: 261 LVNGYCKSSRTKEAQKVVDGIRG---TPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRG 317

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
            V NI  YN+++   CK   VD+    L  M       D+ +YN +I    K     EA 
Sbjct: 318 CVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEAR 377

Query: 256 AVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGY 313
            V D+M + GI PD VTYN+L+  FC+E R  +A  + +++   G  P++VTY TLI G 
Sbjct: 378 QVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGL 437

Query: 314 CRANDLEEALRLREVMAAKG-VYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPD 372
            + N L +A  L   M   G V     TYN+I+ +LCKEG ++ A  L++ M    +  +
Sbjct: 438 SQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEAN 497

Query: 373 NVTCNTLINAYCKIG--DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL 430
            VT N  I+  CK G  D AS++     + E   + D+ +Y  +I G CKA+++D A +L
Sbjct: 498 TVTYNIFIDRLCKEGRLDEASSL-----LSEMDTLRDEVSYTTVIIGLCKAEQLDRASKL 552

Query: 431 LFGMLDA-GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFC 489
              M+   G   +  +++ L+D +      +  L LL+  V RG    V  Y  +I   C
Sbjct: 553 AREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYNMVITCLC 612

Query: 490 KKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
           K +KVD A  LF+ M   GI+  SV YT L Y     G  K    +L++M
Sbjct: 613 KLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEM 662



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 116/384 (30%), Positives = 193/384 (50%), Gaps = 9/384 (2%)

Query: 146 TQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNV 205
           T+   ++ + +     +P +   T++++ L K+   D   K+ + M++ G   ++  Y  
Sbjct: 166 TEKAYELLETLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTA 225

Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
           L+   C++  VD+   +  EM  KD  AD   Y +L+  YCK     EA  V D +    
Sbjct: 226 LMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRG-- 283

Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEAL 323
            +P I  YN+L+ G+C+EGR+ E   +F D+  +G  PN  TY  ++DG C+   ++EA 
Sbjct: 284 -TPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAF 342

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
              E M + G  P VV+YN I+  L K  + ++A ++L++M +  I PD VT NTL+  +
Sbjct: 343 PFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQF 402

Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY 443
           CK      A+ +   M++AG+  D  TY  LI G  +   +  A EL+  ML  G   S 
Sbjct: 403 CKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSA 462

Query: 444 C-SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
           C +Y+ ++D  C +   +  L L+D     G+  +   Y   I R CK+ ++D A  L +
Sbjct: 463 CTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLS 522

Query: 503 LMQGNGILGDSVIYTSLAYAYWRA 526
            M     L D V YT++     +A
Sbjct: 523 EMD---TLRDEVSYTTVIIGLCKA 543



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 122/468 (26%), Positives = 217/468 (46%), Gaps = 19/468 (4%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHV 132
           N + S  ++ T+I  L K ++   A+ ++++     F+  P V+                
Sbjct: 75  NCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFV--PDVVT--------------- 117

Query: 133 LSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMV 192
            S L           +  ++  +M  +   P+L     L++ L K   T+  +++ + +V
Sbjct: 118 YSILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLV 177

Query: 193 QLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHY 252
             G V ++  Y +++   CK   +DK  K++  M  +     + TY  L+   C+ G   
Sbjct: 178 SSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVD 237

Query: 253 EALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDG 312
           EA  +   M  +  + D + Y SL++G+C+  R +EA+++   I+G TP    Y  L+DG
Sbjct: 238 EAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRG-TPYIDVYNALMDG 296

Query: 313 YCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPD 372
           YC+   L+E   + E MA +G  P + TYN ++  LCK G++ +A   L  M+     PD
Sbjct: 297 YCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPD 356

Query: 373 NVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLF 432
            V+ N +I+   K      A +V ++M++AG+  D  TY  L+  FCK +  D A  +L 
Sbjct: 357 VVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILK 416

Query: 433 GMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDV-SVYRALIRRFCKK 491
            M+ AG  P   +Y+ L+ G    N      +L+ E +  G  V   + Y  +I R CK+
Sbjct: 417 NMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKE 476

Query: 492 EKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
             +  A  L + M G+G+  ++V Y        + G     S +L +M
Sbjct: 477 GCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEM 524



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 103/345 (29%), Positives = 171/345 (49%), Gaps = 5/345 (1%)

Query: 226 MEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGR 285
           M  + V  D+FTYN LI   CK     +A  +   M   G++PD VT+NS++ G C+ G+
Sbjct: 1   MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60

Query: 286 MREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNS 343
              A  L   +  +   P+  TY TLI G C+  +++ A  L +   + G  P VVTY+ 
Sbjct: 61  FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSI 120

Query: 344 ILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAG 403
           +   LCK GRI +A  L+ EM+     P+ VT NTLI+  CK   T  A ++   ++ +G
Sbjct: 121 LADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSG 180

Query: 404 LMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALL 463
            + D  TY  ++ G CK   +D A +++ GML  G +PS  +Y+ L++G C     +   
Sbjct: 181 FVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAH 240

Query: 464 KLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAY 523
            +  E VS+    D   Y +L+  +CK  +   AQ++ + ++G   +    +Y +L   Y
Sbjct: 241 HIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYID---VYNALMDGY 297

Query: 524 WRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLF 568
            + G      ++ +DM  R  +  +K Y        K  ++ + F
Sbjct: 298 CKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAF 342



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 115/395 (29%), Positives = 190/395 (48%), Gaps = 7/395 (1%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           VF+ M     +P++    ++++ L K    D  +   + M   G V ++  YN++I    
Sbjct: 309 VFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLF 368

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           K+S   +  ++L +M    +  D  TYNTL+A +CK+    +A+ +   M + G+ PD V
Sbjct: 369 KASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNV 428

Query: 272 TYNSLIHGFCREGRMREARRLFRDI--KGATPNH-VTYTTLIDGYCRANDLEEALRLREV 328
           TYN+LI G  +  R+ +A  L  ++   G   +   TY T+ID  C+   L++AL L + 
Sbjct: 429 TYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDH 488

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M   GV    VTYN  + +LCKEGR+ +A+ LL+EM+  +   D V+  T+I   CK   
Sbjct: 489 MTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLR---DEVSYTTVIIGLCKAEQ 545

Query: 389 TASAMKVKNRMLEA-GLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
              A K+   M+   GL +   T+  LI  F K K +D A  LL  M+  G SPS  +Y+
Sbjct: 546 LDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYN 605

Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGN 507
            ++   C  +  +   +L DE   RG+      Y  LI   C + +   A ++   M  +
Sbjct: 606 MVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASS 665

Query: 508 GILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRR 542
               D +    L  A    G  +  +++L  M  +
Sbjct: 666 DCEIDDLKCRKLYLALRGQGRGEEAAELLRRMTTK 700



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 93/339 (27%), Positives = 145/339 (42%), Gaps = 40/339 (11%)

Query: 132 VLSWLVIFYANLKMTQ--DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYK 189
           V+S+ +I     K ++  +  QV DQM    + P       L+    K+   D    + K
Sbjct: 357 VVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILK 416

Query: 190 KMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKD-VRADLFTYNTLIALYCKK 248
            M++ GV  +   YN LI    +++ +    +L+ EM     V +   TYNT+I   CK+
Sbjct: 417 NMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKE 476

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYTT 308
           G   +AL + D M   G+  + VTYN  I   C+EGR+ EA  L  ++     + V+YTT
Sbjct: 477 GCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMD-TLRDEVSYTT 535

Query: 309 LIDGYCRANDLE------------------------------------EALRLREVMAAK 332
           +I G C+A  L+                                    EAL L E+M  +
Sbjct: 536 VIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQR 595

Query: 333 GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
           G  P V+TYN ++  LCK  ++  A  L +EM  + I   +V+   LI   C  G    A
Sbjct: 596 GCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEA 655

Query: 393 MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
           ++V   M  +   +D    + L          + A ELL
Sbjct: 656 LQVLEEMASSDCEIDDLKCRKLYLALRGQGRGEEAAELL 694



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 79/301 (26%), Positives = 135/301 (44%), Gaps = 21/301 (6%)

Query: 109 FLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHAC 168
           F     +L  ++K   DPD  ++  + L+   +      D  ++  +M  +  +  + AC
Sbjct: 408 FDDAVGILKNMIKAGVDPDNVTY--NTLISGLSQTNRLGDAYELMHEMLRNGCV--VSAC 463

Query: 169 TV---LLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCE 225
           T    +++ L K+        +   M   GV AN   YN+ I   CK   +D+   LL E
Sbjct: 464 TTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSE 523

Query: 226 MEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMERE-----GISPDIVTYNSLIHGF 280
           M   D   D  +Y T+I   CK     E L    ++ RE     G+     T+N LI  F
Sbjct: 524 M---DTLRDEVSYTTVIIGLCKA----EQLDRASKLAREMVAVKGLCITSHTFNLLIDAF 576

Query: 281 CREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGV 338
            +  R+ EA  L   +  +G +P+ +TY  +I   C+ + +++A  L + MA +G+    
Sbjct: 577 TKTKRLDEALTLLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASS 636

Query: 339 VTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNR 398
           V+Y  ++  LC +GR ++A ++L EM       D++ C  L  A    G    A ++  R
Sbjct: 637 VSYTVLIYGLCGQGRGKEALQVLEEMASSDCEIDDLKCRKLYLALRGQGRGEEAAELLRR 696

Query: 399 M 399
           M
Sbjct: 697 M 697


>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 612

 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 117/381 (30%), Positives = 202/381 (53%), Gaps = 2/381 (0%)

Query: 171 LLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKD 230
           L+N L K   T    ++ +++    V  N+ +YN +I + CK   V++   L  EM  K 
Sbjct: 167 LINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKG 226

Query: 231 VRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREAR 290
           +  D+ TY+ LI+ +C  G   +A+ + ++M  E I+PD+ T++ L+ GFC+EGR++EA+
Sbjct: 227 ISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAK 286

Query: 291 RLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
            +   +  +G  P+ VTY +L+DGYC    + +A  +   MA  GV   V +YN ++   
Sbjct: 287 NVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGF 346

Query: 349 CKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ 408
           CK  ++ +A  L  EM+ K I PD VT N+LI+  CK G  + A+K+ + M + G+  D+
Sbjct: 347 CKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDK 406

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
            TY +++   CK  ++D A  LL  M D G  P   +Y+ L+DG C     +    + ++
Sbjct: 407 ITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFED 466

Query: 469 FVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
            + +G  + V  Y  +I+ FC  +  D A  L + M+ NG + ++  Y  +  + +   E
Sbjct: 467 LLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIIILSLFEKDE 526

Query: 529 PKACSDILDDMYRRRLMITLK 549
                 +L +M  R L+   K
Sbjct: 527 NDMAEKLLREMIARGLLFGWK 547



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 117/422 (27%), Positives = 201/422 (47%), Gaps = 3/422 (0%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           Q  + +  +M  + +   L    +L+N  ++   T   + V+  +++ G   N      L
Sbjct: 73  QTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTL 132

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           I   C    + +      ++       +   Y TLI   CK G    AL +  R++ + +
Sbjct: 133 IKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLV 192

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
            P++V YN++I   C+   + EA  L+ ++  KG +P+ VTY+ LI G+C    L +A+ 
Sbjct: 193 QPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIG 252

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           L   M ++ + P V T++ ++   CKEGR+++A  +L  M ++ I PD VT  +L++ YC
Sbjct: 253 LFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYC 312

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
            +     A  + N M + G+  +  +Y  +I+GFCK K++D A  L   M      P   
Sbjct: 313 LVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVV 372

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
           +Y+ L+DG C        LKL+DE   RG+  D   Y +++   CK  +VD A  L   M
Sbjct: 373 TYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKM 432

Query: 505 QGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
           +  GI  D   YT L     + G  K   +I +D+  +   IT+  Y      +  DN++
Sbjct: 433 KDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFC-DNDL 491

Query: 565 LD 566
            D
Sbjct: 492 FD 493



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 110/383 (28%), Positives = 183/383 (47%), Gaps = 37/383 (9%)

Query: 146 TQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNV 205
           T   LQ+  ++    + P++     +++S+ K +L +  + +Y +MV  G+  ++  Y+ 
Sbjct: 177 TSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSA 236

Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
           LI   C    ++    L  +M  +++  D++T++ L+  +CK+G   EA  V   M ++G
Sbjct: 237 LISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQG 296

Query: 266 ISPDIVTY-----------------------------------NSLIHGFCREGRMREAR 290
           I PD+VTY                                   N +I+GFC+  ++ EA 
Sbjct: 297 IKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAM 356

Query: 291 RLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
            LF+++  K   P+ VTY +LIDG C++  +  AL+L + M  +GV    +TYNSIL  L
Sbjct: 357 NLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDAL 416

Query: 349 CKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ 408
           CK  ++  A  LL +M ++ I PD  T   LI+  CK G    A  +   +L  G  +  
Sbjct: 417 CKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITV 476

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
           +TY  +I GFC     D A  LL  M D G  P+  +Y  ++     K+  +   KLL E
Sbjct: 477 YTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIIILSLFEKDENDMAEKLLRE 536

Query: 469 FVSRGLCVDVSVYRALIRRFCKK 491
            ++RGL         L  RF ++
Sbjct: 537 MIARGLLFGWKKAYCLFTRFFQR 559



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 104/367 (28%), Positives = 169/367 (46%), Gaps = 37/367 (10%)

Query: 235 LFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR 294
           +F +  ++    K   +  A+++   ME  GI+ D+VT+N LI+ F + G    +  +F 
Sbjct: 56  IFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSVFA 115

Query: 295 DI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKG------------------- 333
           +I  KG  PN +T TTLI G C    + +AL   + + A G                   
Sbjct: 116 NILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVG 175

Query: 334 ----------------VYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCN 377
                           V P VV YN+I+  +CK   + +A  L +EM  K I+PD VT +
Sbjct: 176 QTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYS 235

Query: 378 TLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA 437
            LI+ +C +G    A+ + N+M+   +  D +T+  L+ GFCK   +  AK +L  M+  
Sbjct: 236 ALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQ 295

Query: 438 GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYA 497
           G  P   +Y  L+DGYC          + +     G+  +V  Y  +I  FCK +KVD A
Sbjct: 296 GIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEA 355

Query: 498 QRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSAS 557
             LF  M    I+ D V Y SL     ++G+      ++D+M+ R +      Y S   +
Sbjct: 356 MNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDA 415

Query: 558 YAKDNEI 564
             K++++
Sbjct: 416 LCKNHQV 422



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 81/295 (27%), Positives = 136/295 (46%), Gaps = 4/295 (1%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
            + N ++    +PD   +  S LV  +      ++   V   M    + P +     L++
Sbjct: 252 GLFNKMISEEINPD--VYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMD 309

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
                +  +    ++  M Q GV AN+  YN++I+  CK   VD+   L  EM  K++  
Sbjct: 310 GYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIP 369

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           D+ TYN+LI   CK G    AL + D M   G+  D +TYNS++   C+  ++ +A  L 
Sbjct: 370 DVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALL 429

Query: 294 RDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
             +K  G  P+  TYT LIDG C+   L++A  + E +  KG    V TY  +++  C  
Sbjct: 430 TKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDN 489

Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLML 406
                A  LL++M +    P+  T   +I +  +  +   A K+   M+  GL+ 
Sbjct: 490 DLFDKALALLSKMEDNGCIPNAKTYEIIILSLFEKDENDMAEKLLREMIARGLLF 544



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/260 (24%), Positives = 111/260 (42%)

Query: 299 ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDAN 358
            TP    +  ++    + N  + A+ L   M   G+   +VT+N ++    + G    + 
Sbjct: 52  PTPPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSF 111

Query: 359 RLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGF 418
            +   + +K   P+ +T  TLI   C  G    A+   ++++  G  L++  Y  LI+G 
Sbjct: 112 SVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGL 171

Query: 419 CKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDV 478
           CK  +   A +LL  +      P+   Y+ ++D  C          L  E VS+G+  DV
Sbjct: 172 CKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDV 231

Query: 479 SVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDD 538
             Y ALI  FC   K++ A  LFN M    I  D   ++ L   + + G  K   ++L  
Sbjct: 232 VTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAM 291

Query: 539 MYRRRLMITLKIYRSFSASY 558
           M ++ +   +  Y S    Y
Sbjct: 292 MMKQGIKPDVVTYCSLMDGY 311



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 62/265 (23%), Positives = 111/265 (41%), Gaps = 58/265 (21%)

Query: 77  SLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDG--NSHVLS 134
           ++QS+  MI+   K K    A N+ +++  ++ +      N+L+      DG   S  +S
Sbjct: 335 NVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLI------DGLCKSGKIS 388

Query: 135 WLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQL 194
           +              L++ D+M    + PH             D++T             
Sbjct: 389 Y-------------ALKLVDEMHDRGV-PH-------------DKIT------------- 408

Query: 195 GVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEA 254
                   YN ++ A CK+  VDK   LL +M+ + ++ D++TY  LI   CK G   +A
Sbjct: 409 --------YNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDA 460

Query: 255 LAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDG 312
             + + +  +G +  + TY  +I GFC      +A  L   ++  G  PN  TY  +I  
Sbjct: 461 QNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIIILS 520

Query: 313 YCRANDLEEALRLREVMAAKGVYPG 337
               ++ + A +L   M A+G+  G
Sbjct: 521 LFEKDENDMAEKLLREMIARGLLFG 545


>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
 gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
          Length = 918

 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 134/430 (31%), Positives = 208/430 (48%), Gaps = 41/430 (9%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           +   D +    L   L A + LL  L++  +T  V   Y +M+  GV  N+ +YN +I+A
Sbjct: 165 MSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINA 224

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
            CK  +V   E ++ ++   ++  D FTY ++I  +C+K     AL V ++M +EG  P+
Sbjct: 225 LCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPN 284

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDI--------------------------------- 296
            VTY++LI+G C  GR+ EA  L R++                                 
Sbjct: 285 TVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFV 344

Query: 297 ----KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEG 352
               KG  PN  TYT LI G C +  L+ A+ L   M+  GV+P  VTYN+++  L +  
Sbjct: 345 DMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENR 404

Query: 353 RIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYK 412
           RI+ A  +LN M     +P+ VT N +I  YC +GD   AM V N ML+ G   +  TY 
Sbjct: 405 RIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYN 464

Query: 413 ALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSR 472
            +I G+C +     A  +L  M D G  P   SY+ L+ G+C  +  E+   L +E V  
Sbjct: 465 TIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDD 524

Query: 473 GLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWR----AGE 528
           GLC +   Y ALI  +CK EK+D A  L   M+ +G   +   Y  L +   +    +G 
Sbjct: 525 GLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGA 584

Query: 529 PKACSDILDD 538
            + C  ++++
Sbjct: 585 EELCKVMIEE 594



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 121/421 (28%), Positives = 204/421 (48%), Gaps = 2/421 (0%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           LQVF+QM      P+    + L+N L      +  + + ++M+  G++   H     I A
Sbjct: 270 LQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIA 329

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
            C     +   +L  +M+ K    +++TY  LI+  C  G+   A+ +  RM R+G+ P+
Sbjct: 330 LCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPN 389

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLRE 327
            VTYN+LI+      R++ A  +   +   G +PN VTY  +I GYC   D ++A+ +  
Sbjct: 390 TVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMN 449

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
            M  +G    +VTYN+I++  C  G    A R+L+ M +    PD  +   LI  +CKI 
Sbjct: 450 NMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKIS 509

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
              SA  + N M++ GL  ++ TY ALI G+CK +++D A  LL  M  +G  P+  +Y+
Sbjct: 510 KMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYN 569

Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGN 507
            L+ G   +NN     +L    +  G+  +V  Y A+I   CK      A  +FN M   
Sbjct: 570 VLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQ 629

Query: 508 GILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDL 567
           G L + + Y+SL  A  + G+ +   ++  ++ R  L+     Y     +Y    ++   
Sbjct: 630 GCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHA 689

Query: 568 F 568
           F
Sbjct: 690 F 690



 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 97/396 (24%), Positives = 176/396 (44%), Gaps = 37/396 (9%)

Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
           LI +C     + +    L  +    +R  LF Y+ L+    + GM    +    RM  EG
Sbjct: 151 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 210

Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEAL 323
           + P+++ YN++I+  C++G + +A  + + +     +P+  TYT++I G+CR +DL+ AL
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 270

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
           ++   MA +G  P  VTY++++  LC  GR+ +A  L+ EM    I P   TC   I A 
Sbjct: 271 QVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIAL 330

Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGF---- 439
           C +G    A ++   M   G   + +TY ALI G C +  + +A  L   M   G     
Sbjct: 331 CDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNT 390

Query: 440 -------------------------------SPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
                                          SP+  +Y+ ++ GYC   + +  + +++ 
Sbjct: 391 VTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNN 450

Query: 469 FVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
            + RG   ++  Y  +I+ +C       A R+ +LM+  G   D   YT L   + +  +
Sbjct: 451 MLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISK 510

Query: 529 PKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
            ++   + ++M    L      Y +    Y KD ++
Sbjct: 511 MESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKL 546



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 110/440 (25%), Positives = 183/440 (41%), Gaps = 17/440 (3%)

Query: 127 DGNSHVLSW----LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTD 182
           DG      W    L+  +  +   +    +F++M    L P+    T L++   KD   D
Sbjct: 488 DGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLD 547

Query: 183 MVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLI 242
               + + M + G   N+  YNVLIH   K ++    E+L   M  + +  ++ TY  +I
Sbjct: 548 TATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMI 607

Query: 243 ALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GAT 300
              CK G    AL + ++M  +G  P+++TY+SLI    +EG++ EA  LF +++  G  
Sbjct: 608 DGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLI 667

Query: 301 PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRL 360
           P+ +TY  +I+ Y  +  +E A      M   G  P + TY  +++ L  E  + D    
Sbjct: 668 PDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLAD---- 723

Query: 361 LNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCK 420
                ++  A  +V  N          D  S M  K   L+ GL +      AL+     
Sbjct: 724 -----QRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQ--VQNALVSNLST 776

Query: 421 AKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSV 480
           A     A ELL  M+  G  P   +Y+ L+       N +  + +     ++G  V ++ 
Sbjct: 777 AGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNG 836

Query: 481 YRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMY 540
           Y+ LI   C+  +   A+  F  M       D V+   L     R G    C + L  M 
Sbjct: 837 YKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIME 896

Query: 541 RRRLMITLKIYRSFSASYAK 560
            RR M +  IY   +   +K
Sbjct: 897 TRRYMPSFHIYTILAREASK 916



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 98/421 (23%), Positives = 166/421 (39%), Gaps = 69/421 (16%)

Query: 75  KHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLS 134
           + ++Q++  +IH LTK  +F  A+                    L K+            
Sbjct: 562 RPNVQTYNVLIHGLTKQNNFSGAEE-------------------LCKV------------ 590

Query: 135 WLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQL 194
                     M ++G           + P++   T +++ L K+  T +  +++ KM++ 
Sbjct: 591 ----------MIEEG-----------IFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQ 629

Query: 195 GVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEA 254
           G + N+  Y+ LI A  +   V++ E L  E+E   +  D  TY  +I  Y   G    A
Sbjct: 630 GCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHA 689

Query: 255 LAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYC 314
                RM + G  P + TY  LI G   E  + + R        A P+ V   +   GY 
Sbjct: 690 FNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRL------AALPDVVPNCSF--GY- 740

Query: 315 RANDLEEALRLREVMAAK--GVYPG--VVTYNSILRKLCKEGRIRDANRLLNEMNEKKIA 370
           +  D +       VM+AK   + PG  V   N+++  L   GR  +AN LL  M  + + 
Sbjct: 741 QTTDQDAV----SVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLC 796

Query: 371 PDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL 430
           PD    N+L+ +  ++ +   AM V   M   G  +    YK LI   C+      A+  
Sbjct: 797 PDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARIT 856

Query: 431 LFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCK 490
              ML   ++P     + L+DG      ++  ++ L    +R       +Y  L R   K
Sbjct: 857 FENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILAREASK 916

Query: 491 K 491
           K
Sbjct: 917 K 917


>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
          Length = 1007

 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 134/430 (31%), Positives = 208/430 (48%), Gaps = 41/430 (9%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           +   D +    L   L A + LL  L++  +T  V   Y +M+  GV  N+ +YN +I+A
Sbjct: 165 MSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINA 224

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
            CK  +V   E ++ ++   ++  D FTY ++I  +C+K     AL V ++M +EG  P+
Sbjct: 225 LCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPN 284

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDI--------------------------------- 296
            VTY++LI+G C  GR+ EA  L R++                                 
Sbjct: 285 TVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFV 344

Query: 297 ----KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEG 352
               KG  PN  TYT LI G C +  L+ A+ L   M+  GV+P  VTYN+++  L +  
Sbjct: 345 DMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENR 404

Query: 353 RIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYK 412
           RI+ A  +LN M     +P+ VT N +I  YC +GD   AM V N ML+ G   +  TY 
Sbjct: 405 RIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYN 464

Query: 413 ALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSR 472
            +I G+C +     A  +L  M D G  P   SY+ L+ G+C  +  E+   L +E V  
Sbjct: 465 TIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDD 524

Query: 473 GLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWR----AGE 528
           GLC +   Y ALI  +CK EK+D A  L   M+ +G   +   Y  L +   +    +G 
Sbjct: 525 GLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGA 584

Query: 529 PKACSDILDD 538
            + C  ++++
Sbjct: 585 EELCKVMIEE 594



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 121/422 (28%), Positives = 204/422 (48%), Gaps = 2/422 (0%)

Query: 149 GLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIH 208
            LQVF+QM      P+    + L+N L      +  + + ++M+  G++   H     I 
Sbjct: 269 ALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPII 328

Query: 209 ACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISP 268
           A C     +   +L  +M+ K    +++TY  LI+  C  G+   A+ +  RM R+G+ P
Sbjct: 329 ALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFP 388

Query: 269 DIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLR 326
           + VTYN+LI+      R++ A  +   +   G +PN VTY  +I GYC   D ++A+ + 
Sbjct: 389 NTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVM 448

Query: 327 EVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKI 386
             M  +G    +VTYN+I++  C  G    A R+L+ M +    PD  +   LI  +CKI
Sbjct: 449 NNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKI 508

Query: 387 GDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSY 446
               SA  + N M++ GL  ++ TY ALI G+CK +++D A  LL  M  +G  P+  +Y
Sbjct: 509 SKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTY 568

Query: 447 SWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQG 506
           + L+ G   +NN     +L    +  G+  +V  Y A+I   CK      A  +FN M  
Sbjct: 569 NVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIE 628

Query: 507 NGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
            G L + + Y+SL  A  + G+ +   ++  ++ R  L+     Y     +Y    ++  
Sbjct: 629 QGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEH 688

Query: 567 LF 568
            F
Sbjct: 689 AF 690



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 97/396 (24%), Positives = 176/396 (44%), Gaps = 37/396 (9%)

Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
           LI +C     + +    L  +    +R  LF Y+ L+    + GM    +    RM  EG
Sbjct: 151 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 210

Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEAL 323
           + P+++ YN++I+  C++G + +A  + + +     +P+  TYT++I G+CR +DL+ AL
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 270

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
           ++   MA +G  P  VTY++++  LC  GR+ +A  L+ EM    I P   TC   I A 
Sbjct: 271 QVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIAL 330

Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGF---- 439
           C +G    A ++   M   G   + +TY ALI G C +  + +A  L   M   G     
Sbjct: 331 CDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNT 390

Query: 440 -------------------------------SPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
                                          SP+  +Y+ ++ GYC   + +  + +++ 
Sbjct: 391 VTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNN 450

Query: 469 FVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
            + RG   ++  Y  +I+ +C       A R+ +LM+  G   D   YT L   + +  +
Sbjct: 451 MLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISK 510

Query: 529 PKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
            ++   + ++M    L      Y +    Y KD ++
Sbjct: 511 MESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKL 546



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 113/453 (24%), Positives = 186/453 (41%), Gaps = 22/453 (4%)

Query: 127 DGNSHVLSW----LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTD 182
           DG      W    L+  +  +   +    +F++M    L P+    T L++   KD   D
Sbjct: 488 DGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLD 547

Query: 183 MVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLI 242
               + + M + G   N+  YNVLIH   K ++    E+L   M  + +  ++ TY  +I
Sbjct: 548 TATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMI 607

Query: 243 ALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GAT 300
              CK G    AL + ++M  +G  P+++TY+SLI    +EG++ EA  LF +++  G  
Sbjct: 608 DGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLI 667

Query: 301 PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRL 360
           P+ +TY  +I+ Y  +  +E A      M   G  P + TY  +++ L  E  + D    
Sbjct: 668 PDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLAD---- 723

Query: 361 LNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCK 420
                ++  A  +V  N          D  S M  K   L+ GL +      AL+     
Sbjct: 724 -----QRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQ--VQNALVSNLST 776

Query: 421 AKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSV 480
           A     A ELL  M+  G  P   +Y+ L+       N +  + +     ++G  V ++ 
Sbjct: 777 AGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNG 836

Query: 481 YRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMY 540
           Y+ LI   C+  +   A+  F  M       D V+   L     R G    C + L  M 
Sbjct: 837 YKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIME 896

Query: 541 RRRLMITLKIYRSFSASYAKDNEILDLFWSHVV 573
            RR M +  IY   +   +K        W HV 
Sbjct: 897 TRRYMPSFHIYTILAREASKKRS-----WKHVA 924



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 98/421 (23%), Positives = 166/421 (39%), Gaps = 69/421 (16%)

Query: 75  KHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLS 134
           + ++Q++  +IH LTK  +F  A+                    L K+            
Sbjct: 562 RPNVQTYNVLIHGLTKQNNFSGAEE-------------------LCKV------------ 590

Query: 135 WLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQL 194
                     M ++G           + P++   T +++ L K+  T +  +++ KM++ 
Sbjct: 591 ----------MIEEG-----------IFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQ 629

Query: 195 GVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEA 254
           G + N+  Y+ LI A  +   V++ E L  E+E   +  D  TY  +I  Y   G    A
Sbjct: 630 GCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHA 689

Query: 255 LAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYC 314
                RM + G  P + TY  LI G   E  + + R        A P+ V   +   GY 
Sbjct: 690 FNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRL------AALPDVVPNCSF--GY- 740

Query: 315 RANDLEEALRLREVMAAK--GVYPG--VVTYNSILRKLCKEGRIRDANRLLNEMNEKKIA 370
           +  D +       VM+AK   + PG  V   N+++  L   GR  +AN LL  M  + + 
Sbjct: 741 QTTDQDAV----SVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLC 796

Query: 371 PDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL 430
           PD    N+L+ +  ++ +   AM V   M   G  +    YK LI   C+      A+  
Sbjct: 797 PDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARIT 856

Query: 431 LFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCK 490
              ML   ++P     + L+DG      ++  ++ L    +R       +Y  L R   K
Sbjct: 857 FENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILAREASK 916

Query: 491 K 491
           K
Sbjct: 917 K 917


>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 918

 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 134/430 (31%), Positives = 208/430 (48%), Gaps = 41/430 (9%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           +   D +    L   L A + LL  L++  +T  V   Y +M+  GV  N+ +YN +I+A
Sbjct: 165 MSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINA 224

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
            CK  +V   E ++ ++   ++  D FTY ++I  +C+K     AL V ++M +EG  P+
Sbjct: 225 LCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPN 284

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDI--------------------------------- 296
            VTY++LI+G C  GR+ EA  L R++                                 
Sbjct: 285 TVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFV 344

Query: 297 ----KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEG 352
               KG  PN  TYT LI G C +  L+ A+ L   M+  GV+P  VTYN+++  L +  
Sbjct: 345 DMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENR 404

Query: 353 RIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYK 412
           RI+ A  +LN M     +P+ VT N +I  YC +GD   AM V N ML+ G   +  TY 
Sbjct: 405 RIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYN 464

Query: 413 ALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSR 472
            +I G+C +     A  +L  M D G  P   SY+ L+ G+C  +  E+   L +E V  
Sbjct: 465 TIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDD 524

Query: 473 GLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWR----AGE 528
           GLC +   Y ALI  +CK EK+D A  L   M+ +G   +   Y  L +   +    +G 
Sbjct: 525 GLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGA 584

Query: 529 PKACSDILDD 538
            + C  ++++
Sbjct: 585 EELCKVMIEE 594



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 121/421 (28%), Positives = 204/421 (48%), Gaps = 2/421 (0%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           LQVF+QM      P+    + L+N L      +  + + ++M+  G++   H     I A
Sbjct: 270 LQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIA 329

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
            C     +   +L  +M+ K    +++TY  LI+  C  G+   A+ +  RM R+G+ P+
Sbjct: 330 LCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPN 389

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLRE 327
            VTYN+LI+      R++ A  +   +   G +PN VTY  +I GYC   D ++A+ +  
Sbjct: 390 TVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMN 449

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
            M  +G    +VTYN+I++  C  G    A R+L+ M +    PD  +   LI  +CKI 
Sbjct: 450 NMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKIS 509

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
              SA  + N M++ GL  ++ TY ALI G+CK +++D A  LL  M  +G  P+  +Y+
Sbjct: 510 KMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYN 569

Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGN 507
            L+ G   +NN     +L    +  G+  +V  Y A+I   CK      A  +FN M   
Sbjct: 570 VLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQ 629

Query: 508 GILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDL 567
           G L + + Y+SL  A  + G+ +   ++  ++ R  L+     Y     +Y    ++   
Sbjct: 630 GCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHA 689

Query: 568 F 568
           F
Sbjct: 690 F 690



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 97/396 (24%), Positives = 176/396 (44%), Gaps = 37/396 (9%)

Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
           LI +C     + +    L  +    +R  LF Y+ L+    + GM    +    RM  EG
Sbjct: 151 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 210

Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEAL 323
           + P+++ YN++I+  C++G + +A  + + +     +P+  TYT++I G+CR +DL+ AL
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 270

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
           ++   MA +G  P  VTY++++  LC  GR+ +A  L+ EM    I P   TC   I A 
Sbjct: 271 QVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIAL 330

Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGF---- 439
           C +G    A ++   M   G   + +TY ALI G C +  + +A  L   M   G     
Sbjct: 331 CDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNT 390

Query: 440 -------------------------------SPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
                                          SP+  +Y+ ++ GYC   + +  + +++ 
Sbjct: 391 VTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNN 450

Query: 469 FVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
            + RG   ++  Y  +I+ +C       A R+ +LM+  G   D   YT L   + +  +
Sbjct: 451 MLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISK 510

Query: 529 PKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
            ++   + ++M    L      Y +    Y KD ++
Sbjct: 511 MESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKL 546



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 110/440 (25%), Positives = 183/440 (41%), Gaps = 17/440 (3%)

Query: 127 DGNSHVLSW----LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTD 182
           DG      W    L+  +  +   +    +F++M    L P+    T L++   KD   D
Sbjct: 488 DGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLD 547

Query: 183 MVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLI 242
               + + M + G   N+  YNVLIH   K ++    E+L   M  + +  ++ TY  +I
Sbjct: 548 TATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMI 607

Query: 243 ALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GAT 300
              CK G    AL + ++M  +G  P+++TY+SLI    +EG++ EA  LF +++  G  
Sbjct: 608 DGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLI 667

Query: 301 PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRL 360
           P+ +TY  +I+ Y  +  +E A      M   G  P + TY  +++ L  E  + D    
Sbjct: 668 PDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLAD---- 723

Query: 361 LNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCK 420
                ++  A  +V  N          D  S M  K   L+ GL +      AL+     
Sbjct: 724 -----QRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQ--VQNALVSNLST 776

Query: 421 AKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSV 480
           A     A ELL  M+  G  P   +Y+ L+       N +  + +     ++G  V ++ 
Sbjct: 777 AGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNG 836

Query: 481 YRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMY 540
           Y+ LI   C+  +   A+  F  M       D V+   L     R G    C + L  M 
Sbjct: 837 YKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIME 896

Query: 541 RRRLMITLKIYRSFSASYAK 560
            RR M +  IY   +   +K
Sbjct: 897 TRRYMPSFHIYTILAREASK 916



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 98/421 (23%), Positives = 166/421 (39%), Gaps = 69/421 (16%)

Query: 75  KHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLS 134
           + ++Q++  +IH LTK  +F  A+                    L K+            
Sbjct: 562 RPNVQTYNVLIHGLTKQNNFSGAEE-------------------LCKV------------ 590

Query: 135 WLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQL 194
                     M ++G           + P++   T +++ L K+  T +  +++ KM++ 
Sbjct: 591 ----------MIEEG-----------IFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQ 629

Query: 195 GVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEA 254
           G + N+  Y+ LI A  +   V++ E L  E+E   +  D  TY  +I  Y   G    A
Sbjct: 630 GCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHA 689

Query: 255 LAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYC 314
                RM + G  P + TY  LI G   E  + + R        A P+ V   +   GY 
Sbjct: 690 FNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRL------AALPDVVPNCSF--GY- 740

Query: 315 RANDLEEALRLREVMAAK--GVYPG--VVTYNSILRKLCKEGRIRDANRLLNEMNEKKIA 370
           +  D +       VM+AK   + PG  V   N+++  L   GR  +AN LL  M  + + 
Sbjct: 741 QTTDQDAV----SVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLC 796

Query: 371 PDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL 430
           PD    N+L+ +  ++ +   AM V   M   G  +    YK LI   C+      A+  
Sbjct: 797 PDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARIT 856

Query: 431 LFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCK 490
              ML   ++P     + L+DG      ++  ++ L    +R       +Y  L R   K
Sbjct: 857 FENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILAREASK 916

Query: 491 K 491
           K
Sbjct: 917 K 917


>gi|225450007|ref|XP_002272339.1| PREDICTED: pentatricopeptide repeat-containing protein At2g19280
           [Vitis vinifera]
          Length = 644

 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 152/561 (27%), Positives = 259/561 (46%), Gaps = 41/561 (7%)

Query: 38  LTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHIL-TKNKHFKS 96
           L+   + K+L +L+      +L+  FF+W+E  + + KH+++S  TMIHIL + N + K+
Sbjct: 58  LSQFNVMKILNDLFEESTDAALALYFFRWSEYCMGS-KHTVESVCTMIHILVSGNMNHKA 116

Query: 97  AQNMLEKIALRDFLSTPSVLNALVKIHDDPDGN---SHVLSWLVIFYANLKMTQDGLQVF 153
              +L  I+           N  +KIH+          V   LV  Y    MTQ  L++ 
Sbjct: 117 MDLLLHLISYNS--GEEGWHNIFLKIHETHTKRRVLETVYGMLVNCYVKENMTQVALKLI 174

Query: 154 DQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKS 213
            +MR  N+ P +  C  LL +L +    ++ W   K+M   G+  N  + ++ I   C  
Sbjct: 175 CKMRHLNIFPLIGVCNSLLKALLESEQLNLAWDFLKEMKSQGLGLNASIISLFISGYCSQ 234

Query: 214 SDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTY 273
            ++D   KLL EM++  ++ D+  Y  +I   CK  +  EA ++  +M + G+  D V+ 
Sbjct: 235 GNIDTGWKLLMEMKYLGIKPDVVAYTIVIDSLCKMSLLKEATSILFKMTQMGVFLDSVSV 294

Query: 274 NSLIHGFCREGR--------------------------------MREARRLFRDI--KGA 299
           +S++ G+C+ G+                                M +A ++F+D+   G 
Sbjct: 295 SSVVDGYCKVGKSEEAMDVLEVFNLSPNIFVFNSFISKLCTDGNMLKAAKVFQDMCEMGL 354

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
            P+  +YTT++ GYC+  D+  AL+    M  +G+ P V TY  ++   CK G +  A  
Sbjct: 355 IPDCFSYTTMMAGYCKVKDISNALKYLGKMLKRGIRPSVATYTLLIDSCCKPGNMEMAEY 414

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
           L   M  + + PD V+ NTL+N Y K G    A ++ + M  AG+  D  TY  LIHG  
Sbjct: 415 LFQRMITEGLVPDVVSYNTLMNGYGKKGHLQKAFELLSMMRSAGVSPDLVTYNILIHGLI 474

Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
           K   ++ AK++L  +   GFSP   +++ ++ G+ NK N E    L        L  DV 
Sbjct: 475 KRGLVNEAKDILDELTRRGFSPDVVTFTNIIGGFSNKGNFEEAFLLFFYMSEHHLEPDVV 534

Query: 480 VYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
              AL+  +C+   +  A  LF+ M   G+  D ++Y SL + +   G       ++  M
Sbjct: 535 TCSALLNGYCRTRCMAEANVLFHKMLDAGLKADVILYNSLIHGFCSLGNIDDACHLVSMM 594

Query: 540 YRRRLMITLKIYRSFSASYAK 560
               +M     + +    Y K
Sbjct: 595 IEHGIMPNNITHHALVLGYEK 615



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 109/397 (27%), Positives = 183/397 (46%), Gaps = 34/397 (8%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N+ ++S  +  Y +      G ++  +M+   + P + A T++++SL K  L      + 
Sbjct: 220 NASIISLFISGYCSQGNIDTGWKLLMEMKYLGIKPDVVAYTIVIDSLCKMSLLKEATSIL 279

Query: 189 KKMVQLGVV--------------------------------ANIHLYNVLIHACCKSSDV 216
            KM Q+GV                                  NI ++N  I   C   ++
Sbjct: 280 FKMTQMGVFLDSVSVSSVVDGYCKVGKSEEAMDVLEVFNLSPNIFVFNSFISKLCTDGNM 339

Query: 217 DKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSL 276
            K  K+  +M    +  D F+Y T++A YCK      AL    +M + GI P + TY  L
Sbjct: 340 LKAAKVFQDMCEMGLIPDCFSYTTMMAGYCKVKDISNALKYLGKMLKRGIRPSVATYTLL 399

Query: 277 IHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGV 334
           I   C+ G M  A  LF+ +  +G  P+ V+Y TL++GY +   L++A  L  +M + GV
Sbjct: 400 IDSCCKPGNMEMAEYLFQRMITEGLVPDVVSYNTLMNGYGKKGHLQKAFELLSMMRSAGV 459

Query: 335 YPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMK 394
            P +VTYN ++  L K G + +A  +L+E+  +  +PD VT   +I  +   G+   A  
Sbjct: 460 SPDLVTYNILIHGLIKRGLVNEAKDILDELTRRGFSPDVVTFTNIIGGFSNKGNFEEAFL 519

Query: 395 VKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYC 454
           +   M E  L  D  T  AL++G+C+ + M  A  L   MLDAG       Y+ L+ G+C
Sbjct: 520 LFFYMSEHHLEPDVVTCSALLNGYCRTRCMAEANVLFHKMLDAGLKADVILYNSLIHGFC 579

Query: 455 NKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
           +  N +    L+   +  G+  +   + AL+  + KK
Sbjct: 580 SLGNIDDACHLVSMMIEHGIMPNNITHHALVLGYEKK 616



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/186 (24%), Positives = 83/186 (44%), Gaps = 24/186 (12%)

Query: 78  LQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLV 137
           L ++  +IH L K      A+++L+++  R F  +P V+     I    +  +   ++L+
Sbjct: 463 LVTYNILIHGLIKRGLVNEAKDILDELTRRGF--SPDVVTFTNIIGGFSNKGNFEEAFLL 520

Query: 138 IFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVV 197
            FY               M  H+L P +  C+ LLN   + R       ++ KM+  G+ 
Sbjct: 521 FFY---------------MSEHHLEPDVVTCSALLNGYCRTRCMAEANVLFHKMLDAGLK 565

Query: 198 ANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAV 257
           A++ LYN LIH  C   ++D    L+  M    +  +  T++ L+       + YE   V
Sbjct: 566 ADVILYNSLIHGFCSLGNIDDACHLVSMMIEHGIMPNNITHHALV-------LGYEKKCV 618

Query: 258 QDRMER 263
           ++ +ER
Sbjct: 619 ENPVER 624


>gi|297809453|ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318447|gb|EFH48869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 575

 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 116/357 (32%), Positives = 192/357 (53%), Gaps = 2/357 (0%)

Query: 155 QMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSS 214
           ++R     P++   T L++   K    +    ++ +M + G+VAN   Y VLIH   K+ 
Sbjct: 188 ELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNG 247

Query: 215 DVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYN 274
              +  ++  +M+   V  +L+TYN ++   CK G   +A  V D M   G+S +IVTYN
Sbjct: 248 IKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYN 307

Query: 275 SLIHGFCREGRMREARRLFRDIKG--ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAK 332
           +LI G CRE +  EA ++   +K     PN +TY TLIDG+C    L +AL L   + ++
Sbjct: 308 TLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSR 367

Query: 333 GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
           G+ P +VTYN ++   C++G    A +++ EM E+ I P  VT   LI+ + +  +  +A
Sbjct: 368 GLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETA 427

Query: 393 MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
           +++++ M E GL+ D  TY  LIHGFC   +M+ A  L   M++    P+   Y+ ++ G
Sbjct: 428 IQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILG 487

Query: 453 YCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGI 509
           YC + +    L+L  +   + L  +V+ Y  LIR  CK+ K+  A+ L   M  +GI
Sbjct: 488 YCKEGSSYRALRLFRDMEEKELAPNVASYSYLIRVLCKERKLKEAEDLVEKMIDSGI 544



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 102/300 (34%), Positives = 178/300 (59%), Gaps = 2/300 (0%)

Query: 145 MTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYN 204
           + + G +++++M+ H + P+L+    ++N L KD  T   +KV+ +M + GV  NI  YN
Sbjct: 248 IKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYN 307

Query: 205 VLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMERE 264
            LI   C+    ++  K++ +M+   +  +L TYNTLI  +C  G   +AL++   ++  
Sbjct: 308 TLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSR 367

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEA 322
           G+SP +VTYN L+ GFCR+G    A ++ +++  +G  P+ VTYT LID + R++++E A
Sbjct: 368 GLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETA 427

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
           ++LR  M   G+ P V TY+ ++   C +G++ +A+RL   M EK + P+ V  NT+I  
Sbjct: 428 IQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILG 487

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           YCK G +  A+++   M E  L  +  +Y  LI   CK +++  A++L+  M+D+G  PS
Sbjct: 488 YCKEGSSYRALRLFRDMEEKELAPNVASYSYLIRVLCKERKLKEAEDLVEKMIDSGIDPS 547



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 126/514 (24%), Positives = 242/514 (47%), Gaps = 9/514 (1%)

Query: 44  HKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEK 103
            K L+ L N   +P L  AF          ++H+ +S   ++ +L     +  AQ++L +
Sbjct: 6   QKTLILLANLIKVPPLK-AFSLLNSPNFHGFQHTHESISILLRLLLSGNLYSHAQSLLLQ 64

Query: 104 IA----LRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVH 159
           +        F ++ S+L+ L +  +     S +   ++  Y   +     +  F++M   
Sbjct: 65  VISGKIQSQFFTSSSLLHYLTE-SETSKTKSRLYEVIINAYVQSQSLDSSIYYFNEMVDK 123

Query: 160 NLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKV 219
             +P  +    LL  +      +  W  + +  ++ VV +++ + ++I  CC++ +++K 
Sbjct: 124 GFVPGSNCFNNLLTFVVGSSSFNQWWCFFNES-KIKVVLDVYSFGIVIKGCCEAGEIEKS 182

Query: 220 EKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHG 279
             LL E+       ++  Y TLI   CKKG   +A  +   M + G+  +  TY  LIHG
Sbjct: 183 FDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHG 242

Query: 280 FCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPG 337
             + G  ++   ++  ++  G  PN  TY  +++  C+    ++A ++ + M  +GV   
Sbjct: 243 LFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCN 302

Query: 338 VVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKN 397
           +VTYN+++  LC+E +  +AN+++++M    I P+ +T NTLI+ +C +G    A+ +  
Sbjct: 303 IVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCR 362

Query: 398 RMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKN 457
            +   GL     TY  L+ GFC+  +   A +++  M + G  PS  +Y+ L+D +   +
Sbjct: 363 DLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSD 422

Query: 458 NEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYT 517
           N E  ++L       GL  DV  Y  LI  FC K +++ A RLF  M    +  + VIY 
Sbjct: 423 NMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYN 482

Query: 518 SLAYAYWRAGEPKACSDILDDMYRRRLMITLKIY 551
           ++   Y + G       +  DM  + L   +  Y
Sbjct: 483 TMILGYCKEGSSYRALRLFRDMEEKELAPNVASY 516



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 100/349 (28%), Positives = 181/349 (51%), Gaps = 2/349 (0%)

Query: 193 QLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHY 252
           + G   N+ +Y  LI  CCK  +++K + L  EM    + A+ +TY  LI    K G+  
Sbjct: 191 EFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKK 250

Query: 253 EALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLI 310
           +   + ++M+  G+ P++ TYN +++  C++GR ++A ++F +++  G + N VTY TLI
Sbjct: 251 QGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLI 310

Query: 311 DGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIA 370
            G CR     EA ++ + M +  + P ++TYN+++   C  G++  A  L  ++  + ++
Sbjct: 311 GGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLS 370

Query: 371 PDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL 430
           P  VT N L++ +C+ GDT+ A K+   M E G+   + TY  LI  F ++  M+ A +L
Sbjct: 371 PSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQL 430

Query: 431 LFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCK 490
              M + G  P   +YS L+ G+C K       +L    V + L  +  +Y  +I  +CK
Sbjct: 431 RSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCK 490

Query: 491 KEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
           +     A RLF  M+   +  +   Y+ L     +  + K   D+++ M
Sbjct: 491 EGSSYRALRLFRDMEEKELAPNVASYSYLIRVLCKERKLKEAEDLVEKM 539



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 75/234 (32%), Positives = 123/234 (52%), Gaps = 2/234 (0%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           +V DQM+ + + P+L     L++             + + +   G+  ++  YNVL+   
Sbjct: 324 KVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGF 383

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           C+  D     K++ EME + ++    TY  LI  + +      A+ ++  ME  G+ PD+
Sbjct: 384 CRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDV 443

Query: 271 VTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
            TY+ LIHGFC +G+M EA RLF+ +  K   PN V Y T+I GYC+      ALRL   
Sbjct: 444 HTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRD 503

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
           M  K + P V +Y+ ++R LCKE ++++A  L+ +M +  I P +  CN +  A
Sbjct: 504 MEEKELAPNVASYSYLIRVLCKERKLKEAEDLVEKMIDSGIDPSDTICNLISRA 557



 Score = 49.3 bits (116), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 43/203 (21%), Positives = 77/203 (37%), Gaps = 36/203 (17%)

Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSPS--------------------YC------ 444
           Y+ +I+ + +++ +D +      M+D GF P                     +C      
Sbjct: 97  YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESK 156

Query: 445 --------SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDY 496
                   S+  ++ G C     E    LL E    G   +V +Y  LI   CKK +++ 
Sbjct: 157 IKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEK 216

Query: 497 AQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSA 556
           A+ LF  M   G++ +   YT L +  ++ G  K   ++ + M    +   L  Y     
Sbjct: 217 AKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMN 276

Query: 557 SYAKDNEILDLF--WSHVVDRGL 577
              KD    D F  +  + +RG+
Sbjct: 277 QLCKDGRTKDAFKVFDEMRERGV 299


>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
 gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62670, mitochondrial; Flags: Precursor
 gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
          Length = 630

 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 115/395 (29%), Positives = 208/395 (52%), Gaps = 2/395 (0%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
            + + + D+M      P L    V++N L K   TD+ + +  KM Q  +   + +YN +
Sbjct: 203 SEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTI 262

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           I   CK   +D    L  EME K +R ++ TY++LI+  C  G   +A  +   M    I
Sbjct: 263 IDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKI 322

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
           +PD+ T+++LI  F +EG++ EA +L+ ++  +   P+ VTY++LI+G+C  + L+EA +
Sbjct: 323 NPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQ 382

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           + E M +K  +P VVTYN++++  CK  R+ +   +  EM+++ +  + VT N LI    
Sbjct: 383 MFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLF 442

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           + GD   A ++   M+  G+  +  TY  L+ G CK  +++ A  +   +  +   P+  
Sbjct: 443 QAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIY 502

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
           +Y+ +++G C     E    L      +G+  DV  Y  +I  FC+K   + A  LF  M
Sbjct: 503 TYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEM 562

Query: 505 QGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
           + +G L +S  Y +L  A  R G+ +A ++++ +M
Sbjct: 563 KEDGTLPNSGCYNTLIRARLRDGDREASAELIKEM 597



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 133/476 (27%), Positives = 234/476 (49%), Gaps = 11/476 (2%)

Query: 95  KSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFD 154
           K ++N L ++ L D ++   +   +VK    P     ++ +  +  A  KM +  + +  
Sbjct: 51  KLSRNGLSELKLDDAVA---LFGEMVKSRPFPS----IIEFSKLLSAIAKMNKFDVVISL 103

Query: 155 QMRVHNL-MPHLH-ACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCK 212
             ++ NL +PH H   ++L+N   +     +   V  KM++LG   NI   + L++  C 
Sbjct: 104 GEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCH 163

Query: 213 SSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVT 272
           S  + +   L+ +M     + +  T+NTLI          EA+A+ DRM  +G  PD+VT
Sbjct: 164 SKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVT 223

Query: 273 YNSLIHGFCREGRMREARRLFRDIKGA--TPNHVTYTTLIDGYCRANDLEEALRLREVMA 330
           Y  +++G C+ G    A  L   ++     P  + Y T+IDG C+   +++AL L + M 
Sbjct: 224 YGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEME 283

Query: 331 AKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTA 390
            KG+ P VVTY+S++  LC  GR  DA+RLL++M E+KI PD  T + LI+A+ K G   
Sbjct: 284 TKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLV 343

Query: 391 SAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLV 450
            A K+ + M++  +     TY +LI+GFC    +D AK++   M+     P   +Y+ L+
Sbjct: 344 EAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLI 403

Query: 451 DGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGIL 510
            G+C     E  +++  E   RGL  +   Y  LI+   +    D AQ +F  M  +G+ 
Sbjct: 404 KGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVP 463

Query: 511 GDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
            + + Y +L     + G+ +    + + + R ++  T+  Y        K  ++ D
Sbjct: 464 PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVED 519



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 136/502 (27%), Positives = 230/502 (45%), Gaps = 37/502 (7%)

Query: 19  AIMLKGHWAKL-LNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHS 77
           A+ + G   KL   PNI + L+S      LLN Y  CH   +S A     +  V  Y+ +
Sbjct: 135 ALAVLGKMMKLGYEPNIVT-LSS------LLNGY--CHSKRISEAVALVDQMFVTGYQPN 185

Query: 78  LQSHWTMIHILTKNKHFKSAQNMLEKIALR----DFLSTPSVLNALVKIHDDPDGNSHVL 133
             +  T+IH L  +     A  +++++  +    D ++   V+N L K  D         
Sbjct: 186 TVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGD--------- 236

Query: 134 SWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQ 193
                       T     + ++M    L P +     +++ L K +  D    ++K+M  
Sbjct: 237 ------------TDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMET 284

Query: 194 LGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYE 253
            G+  N+  Y+ LI   C         +LL +M  + +  D+FT++ LI  + K+G   E
Sbjct: 285 KGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVE 344

Query: 254 ALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLID 311
           A  + D M +  I P IVTY+SLI+GFC   R+ EA+++F  +  K   P+ VTY TLI 
Sbjct: 345 AEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIK 404

Query: 312 GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAP 371
           G+C+   +EE + +   M+ +G+    VTYN +++ L + G    A  +  EM    + P
Sbjct: 405 GFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPP 464

Query: 372 DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
           + +T NTL++  CK G    AM V   +  + +    +TY  +I G CKA +++   +L 
Sbjct: 465 NIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLF 524

Query: 432 FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
             +   G  P   +Y+ ++ G+C K ++E    L  E    G   +   Y  LIR   + 
Sbjct: 525 CNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRD 584

Query: 492 EKVDYAQRLFNLMQGNGILGDS 513
              + +  L   M+  G  GD+
Sbjct: 585 GDREASAELIKEMRSCGFAGDA 606



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 117/233 (50%), Gaps = 2/233 (0%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           Q+F+ M   +  P +     L+    K +  +   +V+++M Q G+V N   YN+LI   
Sbjct: 382 QMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGL 441

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
            ++ D D  +++  EM    V  ++ TYNTL+   CK G   +A+ V + ++R  + P I
Sbjct: 442 FQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTI 501

Query: 271 VTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
            TYN +I G C+ G++ +   LF ++  KG  P+ V Y T+I G+CR    EEA  L + 
Sbjct: 502 YTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKE 561

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
           M   G  P    YN+++R   ++G    +  L+ EM     A D  T   + N
Sbjct: 562 MKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTN 614



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 90/350 (25%), Positives = 163/350 (46%), Gaps = 24/350 (6%)

Query: 83  TMIHILTKNKHFKSAQNM---LEKIALRDFLSTPS-----------------VLNALVKI 122
           T+I  L K KH   A N+   +E   +R  + T S                 +L+ +++ 
Sbjct: 261 TIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIER 320

Query: 123 HDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTD 182
             +PD      S L+  +       +  +++D+M   ++ P +   + L+N        D
Sbjct: 321 KINPD--VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLD 378

Query: 183 MVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLI 242
              ++++ MV      ++  YN LI   CK   V++  ++  EM  + +  +  TYN LI
Sbjct: 379 EAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILI 438

Query: 243 ALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGA--T 300
               + G    A  +   M  +G+ P+I+TYN+L+ G C+ G++ +A  +F  ++ +   
Sbjct: 439 QGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 498

Query: 301 PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRL 360
           P   TY  +I+G C+A  +E+   L   ++ KGV P VV YN+++   C++G   +A+ L
Sbjct: 499 PTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADAL 558

Query: 361 LNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
             EM E    P++   NTLI A  + GD  ++ ++   M   G   D  T
Sbjct: 559 FKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST 608


>gi|297738205|emb|CBI27406.3| unnamed protein product [Vitis vinifera]
          Length = 821

 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 113/362 (31%), Positives = 190/362 (52%), Gaps = 2/362 (0%)

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
           ++Y++M    +  N  + + +I    +   + + +     +   DV  ++  YN +I  Y
Sbjct: 458 ELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGY 517

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNH 303
            K G   EA+    ++  +GISP IVT+NSLI+GFC++G++ EA +L   IK  G  P  
Sbjct: 518 AKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTS 577

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
           VTYTTL++GYC   D+     +   M AK + P  +TY  +++ LCKEGR+ ++ +LL  
Sbjct: 578 VTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKY 637

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
           M  + + PD +T NT+I ++CK  D   A ++ N+ML+  L     TY  LI+G C    
Sbjct: 638 MYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGN 697

Query: 424 MDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRA 483
           +  A  LL  + D     +  +Y+ ++  +C K + +  L    + V RG  V +  Y A
Sbjct: 698 LKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSA 757

Query: 484 LIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRR 543
           +I R CK+  +  A+  F +M  +GI  D  I   +  A+ R+G+P +  +I   M +  
Sbjct: 758 VINRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIFAMMIKCG 817

Query: 544 LM 545
           L+
Sbjct: 818 LL 819



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 142/564 (25%), Positives = 242/564 (42%), Gaps = 68/564 (12%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFL-STPSVLNALVKIHDDPDGNSH 131
            ++HS  S + + H++ +    K  + +L ++   +   S PS+   L     D D N+ 
Sbjct: 110 GFRHSRVSWFIVSHVVARKGQSKELRRVLNQMVEEEGSGSAPSLCELLCNSFRDWDLNNV 169

Query: 132 VLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKM 191
           V   L   Y+  +M  D L V  +M+V NL   +     LL +L   R TD++W VY ++
Sbjct: 170 VWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNL---RHTDIMWDVYNEI 226

Query: 192 VQLGVVANIHL-----------------------------------YNVLIHACCKSSDV 216
              GV  N +                                    +N L+   CK   V
Sbjct: 227 KASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSV 286

Query: 217 DKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSL 276
           D  +   C M    +  D+++YN L+   C  G   EAL   + ME  G+ PDIVTYN L
Sbjct: 287 DVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNIL 346

Query: 277 IHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGV 334
            +GF   G +  A ++ +   + G  P+ VTYT LI G+C+  ++EE+ +L+E M ++G+
Sbjct: 347 ANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGL 406

Query: 335 YPGVVTYNSILRKLCKEGRIRDANRLLNEMN---------------------------EK 367
              +VTY  +L  LCK GRI +A  LL+EM                             K
Sbjct: 407 KLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSRGAVEEAIELYEEMCSK 466

Query: 368 KIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIA 427
           +I P++  C+ +I+   + G  + A    + + ++ +  +   Y  +I G+ K   +  A
Sbjct: 467 RIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEA 526

Query: 428 KELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRR 487
                 +++ G SP+  +++ L+ G+C K      +KLLD     GL      Y  L+  
Sbjct: 527 VRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNG 586

Query: 488 FCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMIT 547
           +C++  +     + + M+   I    + YT +     + G       +L  MY R L   
Sbjct: 587 YCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPD 646

Query: 548 LKIYRSFSASYAKDNEILDLFWSH 571
              Y +   S+ K +++   F  H
Sbjct: 647 QITYNTVIQSFCKAHDLQKAFQLH 670



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 111/462 (24%), Positives = 210/462 (45%), Gaps = 31/462 (6%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           ++ L+  + M  H + P +    +L N      L    WKV ++M+  G+  ++  Y +L
Sbjct: 322 EEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTIL 381

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           I   C+  ++++  KL  +M  + ++  + TY  L++  CK G   EA+ +   ME  G+
Sbjct: 382 ICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGL 441

Query: 267 SPDIVTYN---------------------------SLIHGFCREGRMREARRLFRDIKGA 299
            PD++TY+                           ++I G   +G + EA+  F  +  +
Sbjct: 442 KPDLLTYSRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKS 501

Query: 300 --TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDA 357
                 + Y  +IDGY +  ++ EA+R  + +  KG+ P +VT+NS++   CK+G++ +A
Sbjct: 502 DVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEA 561

Query: 358 NRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHG 417
            +LL+ +    + P +VT  TL+N YC+ GD  S   + + M    +   Q TY  ++ G
Sbjct: 562 VKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKG 621

Query: 418 FCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVD 477
            CK   +  + +LL  M   G  P   +Y+ ++  +C  ++ +   +L ++ +   L   
Sbjct: 622 LCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPS 681

Query: 478 VSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILD 537
              Y  LI   C    +  A RL   +Q   I    V YT++  A+   G+ +       
Sbjct: 682 PVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFH 741

Query: 538 DMYRRRLMITLKIYRSFSASYAKDNEILD--LFWSHVVDRGL 577
            M  R   ++++ Y +      K N I D   F+  ++  G+
Sbjct: 742 QMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGI 783



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 100/414 (24%), Positives = 180/414 (43%), Gaps = 33/414 (7%)

Query: 168 CTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEME 227
           C +L NS     L ++VW                  ++L  A  ++  V     +L +M+
Sbjct: 154 CELLCNSFRDWDLNNVVW------------------DMLACAYSRAEMVHDALFVLAKMK 195

Query: 228 FKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMR 287
             +++  + TYN+L+       + ++   V + ++  G+  +  T   LI G CR+ R++
Sbjct: 196 VLNLQVSIATYNSLLYNLRHTDIMWD---VYNEIKASGVPQNEYTNPILIDGLCRQSRLQ 252

Query: 288 EARRLFRDIKGAT--PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSIL 345
           +A    R+  G    P+ V++  L+ G+C+   ++ A     +M   G+ P V +YN +L
Sbjct: 253 DAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILL 312

Query: 346 RKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLM 405
             LC  G + +A    N+M    + PD VT N L N +  +G  + A KV  RML  GL 
Sbjct: 313 HGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLN 372

Query: 406 LDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKL 465
            D  TY  LI G C+   ++ + +L   ML  G   S  +Y+ L+   C     +  + L
Sbjct: 373 PDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVIL 432

Query: 466 LDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWR 525
           L E    GL  D+  Y         +  V+ A  L+  M    I  +S + +++    + 
Sbjct: 433 LHEMEVIGLKPDLLTY--------SRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFE 484

Query: 526 AGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSH--VVDRGL 577
            G         D + +  +   + +Y      YAK   I +   S+  ++++G+
Sbjct: 485 KGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGI 538



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 40/192 (20%), Positives = 82/192 (42%), Gaps = 2/192 (1%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
            + +Q+   M    L P       ++ S  K       ++++ +M+Q  +  +   YNVL
Sbjct: 629 HESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVL 688

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           I+  C   ++   ++LL  ++ + +R     Y T+I  +C KG    AL    +M   G 
Sbjct: 689 INGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGF 748

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLF--RDIKGATPNHVTYTTLIDGYCRANDLEEALR 324
              I  Y+++I+  C+   + +A+  F      G  P+      +++ + R+ D      
Sbjct: 749 EVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFE 808

Query: 325 LREVMAAKGVYP 336
           +  +M   G+ P
Sbjct: 809 IFAMMIKCGLLP 820


>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Brachypodium distachyon]
          Length = 810

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 129/436 (29%), Positives = 218/436 (50%), Gaps = 11/436 (2%)

Query: 142 NLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWK----VYKKMVQLGVV 197
            + MTQ   ++  QM    L+P     +++L  L  DR     WK    ++++M   G+ 
Sbjct: 344 QVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRR----WKDAVCLFEEMADSGL- 398

Query: 198 ANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAV 257
            ++  YN LIH  C++  + +   L   M+   V+  + TYN+L+  YCKKG   EA+ +
Sbjct: 399 PDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKL 458

Query: 258 QDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCR 315
              M  EG  P++VTY +L+ G+  +     A  L  ++K  G + N  TY  LI+G C 
Sbjct: 459 YSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICM 518

Query: 316 ANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVT 375
            + + E   + +   ++G  P ++TYNSI+    K G +  A  +  +M EK + P+ +T
Sbjct: 519 VDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIIT 578

Query: 376 CNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGML 435
             + I+ YC+ G +  A+K+ N +   GL  D   Y ALI+GFC+   M  A +LL  +L
Sbjct: 579 YTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILL 638

Query: 436 DAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVD 495
             G +P+   Y+ L+ GY N N  + + K  +  +  G+  D S Y  LI  F K   V 
Sbjct: 639 KDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVA 698

Query: 496 YAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFS 555
           +A  L++ M   G + D+  +T+L +   R+G+      +L++M R  +   + IY    
Sbjct: 699 FALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLI 758

Query: 556 ASYAKDNEILDLFWSH 571
             Y +D ++ + F  H
Sbjct: 759 NGYLRDCKLQEAFRLH 774



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 118/393 (30%), Positives = 188/393 (47%), Gaps = 4/393 (1%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           ++ L +FD+M+   + P ++    LL    K    D   K+Y +M   G   N+  Y  L
Sbjct: 418 REALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITL 477

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           +       D D    LL EM+   V  + +TYN LI   C      E   +      EG 
Sbjct: 478 MRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGF 537

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
            P ++TYNS+I+GF + G M  A  +++ +  KG  PN +TYT+ IDGYCR    + AL+
Sbjct: 538 IPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALK 597

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           +   +  +G+ P +V YN+++   C+EG +  A +LL  + +  +AP+ V  N+LI  Y 
Sbjct: 598 MLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYK 657

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
            +       K    M++ G++ D  TY  LI GF K   +  A EL   M+  G+ P   
Sbjct: 658 NLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAF 717

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
           +++ L  G C   + +   KLL+E     +  +V +Y  LI  + +  K+  A RL + M
Sbjct: 718 TFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDEM 777

Query: 505 QGNGILGDSVIYTSLAYAYWRAGEPKACSDILD 537
              GI  D   Y  L    +   E   C+D+L+
Sbjct: 778 LNMGIQPDDTTYDILVSKKFL--EADNCADVLN 808



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 101/369 (27%), Positives = 153/369 (41%), Gaps = 36/369 (9%)

Query: 187 VYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYC 246
            Y  MV  GVV +I     L+    + S       L  EM  +  R D + ++ L++   
Sbjct: 144 TYAHMVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMSACL 203

Query: 247 KKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHV 304
           K+GMH +A+ + D M    I PD   Y   I   C+ G    A R+ R++K  G      
Sbjct: 204 KEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDTCDF 263

Query: 305 TYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM 364
           TY T++D   +   +EEALR+ + M   G    V+   +++R  C    + +A  L  E 
Sbjct: 264 TYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKET 323

Query: 365 NEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGL-------------------- 404
            +  I P  V    LI    ++G T  A ++  +M   GL                    
Sbjct: 324 LKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRW 383

Query: 405 --------------MLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLV 450
                         + D FTY  LIH  C+A ++  A  L   M  AG  PS  +Y+ L+
Sbjct: 384 KDAVCLFEEMADSGLPDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLL 443

Query: 451 DGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGIL 510
            GYC K   +  +KL  E    G   +V  Y  L+R +  K+  D A  L + M+ NG+ 
Sbjct: 444 MGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVS 503

Query: 511 GDSVIYTSL 519
            +   Y  L
Sbjct: 504 CNDYTYNVL 512



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 108/446 (24%), Positives = 183/446 (41%), Gaps = 38/446 (8%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
            +  M    ++P + + T LL   A+         ++ +M   G   +  +++ L+ AC 
Sbjct: 144 TYAHMVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMSACL 203

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           K    +   +L  EM   ++  D   Y   I   CK G    AL +   M+  G      
Sbjct: 204 KEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDTCDF 263

Query: 272 TYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           TY +++    + GRM EA R+  +++  G   + +  TTL+ GYC   ++  AL L +  
Sbjct: 264 TYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKET 323

Query: 330 AAKGVYPGVVTYNSILR------------KLCKE-----------------------GRI 354
              G+ P  V Y  ++R            +LC++                        R 
Sbjct: 324 LKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRW 383

Query: 355 RDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKAL 414
           +DA  L  EM +  + PD  T N LI+ +C+      A+ + +RM +AG+     TY +L
Sbjct: 384 KDAVCLFEEMADSGL-PDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSL 442

Query: 415 IHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGL 474
           + G+CK   MD A +L   M   GF P+  +Y  L+ GY  K + +    LLDE    G+
Sbjct: 443 LMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGV 502

Query: 475 CVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSD 534
             +   Y  LI   C  ++V     +       G +   + Y S+   + +AG   +   
Sbjct: 503 SCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFT 562

Query: 535 ILDDMYRRRLMITLKIYRSFSASYAK 560
           +   M  + L   +  Y SF   Y +
Sbjct: 563 VYQQMREKGLPPNIITYTSFIDGYCR 588



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 75/149 (50%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N+ V + L+  Y NL M ++  + ++ M    ++      T L++  +KD       ++Y
Sbjct: 645 NTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELY 704

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
            +M+  G + +   +  L H  C+S D+D  +KLL EM   DVR ++F YN LI  Y + 
Sbjct: 705 SEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRD 764

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLI 277
               EA  + D M   GI PD  TY+ L+
Sbjct: 765 CKLQEAFRLHDEMLNMGIQPDDTTYDILV 793


>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
          Length = 509

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 139/492 (28%), Positives = 230/492 (46%), Gaps = 33/492 (6%)

Query: 59  LSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNA 118
           LS  FFK  +      K S+ ++  MI  L K    + A+++  ++    F       N+
Sbjct: 39  LSRKFFK--DMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNS 96

Query: 119 LVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKD 178
           L+  H                   L +  + + +F+QM+  +  P +     L+N   K 
Sbjct: 97  LIDGH-----------------GKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKF 139

Query: 179 RLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTY 238
                 ++   +M   G+  N+  Y+  I A CK   + +  K   +M    +  + FTY
Sbjct: 140 ERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTY 199

Query: 239 NTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI-- 296
            +LI   CK G   EAL + + + + GI  ++VTY +L+ G C EGRM+EA  +FR +  
Sbjct: 200 TSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLN 259

Query: 297 KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRD 356
            G  PN  TYT L+ G+ +A ++E A  + + M  K + P ++ Y +IL  LC E R+ +
Sbjct: 260 AGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEE 319

Query: 357 ANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIH 416
           A  L+ E+ E  I  + V   TL++AY K G    A+ +   ML+            L+ 
Sbjct: 320 AKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLD------------LVD 367

Query: 417 GFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCV 476
           G CK    ++AK+L   MLD G  P   +Y+ L+DG     N +  L L D  +  G+ +
Sbjct: 368 GLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMEL 427

Query: 477 DVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDIL 536
           D+  Y ALI       +V  A+ L + M G G+L D V+Y  L   Y+  G+     ++ 
Sbjct: 428 DLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQ 487

Query: 537 DDMYRRRLMITL 548
           ++M +R ++  L
Sbjct: 488 NEMAKRGMITGL 499



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 132/469 (28%), Positives = 226/469 (48%), Gaps = 35/469 (7%)

Query: 145 MTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYN 204
           M ++  + F +MR   + P   +C  LL+ L+K    D+  K +K M   G+  ++  YN
Sbjct: 1   MLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYN 60

Query: 205 VLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMERE 264
           ++I   CK  D++    L  +M+      D+ TYN+LI  + K G+  E + + ++M+  
Sbjct: 61  IMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDA 120

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
              PD++TYN+LI+ FC+  RM +A     ++K  G  PN VTY+T ID +C+   L+EA
Sbjct: 121 DCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEA 180

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
           ++    M    + P   TY S++   CK G + +A +L+ E+ +  I  + VT   L++ 
Sbjct: 181 IKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDG 240

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
            C+ G    A +V   ML AG+  +Q TY AL+HGF KAKEM+ AK++L  M +    P 
Sbjct: 241 LCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPD 300

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRF-------------- 488
              Y  ++ G CN++  E    L+ E    G+  +  +Y  L+  +              
Sbjct: 301 LLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLE 360

Query: 489 ---------CKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
                    CK    + A++LF+ M   G++ D + YT+L     + G  +   ++ D M
Sbjct: 361 EMLDLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRM 420

Query: 540 YRRRLMITLKIYR------SFSASYAKDNEILDLFWSHVVDRGLMSKHI 582
               + + L  Y       S S    K   +LD     ++ +G++   +
Sbjct: 421 IEIGMELDLHAYTALIWGLSHSGQVQKARNLLD----EMIGKGVLPDEV 465


>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 568

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 117/357 (32%), Positives = 190/357 (53%), Gaps = 2/357 (0%)

Query: 155 QMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSS 214
           ++R     P++   T L++   K    +    ++ +M + G+VAN   Y VLIH   K+ 
Sbjct: 188 ELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNG 247

Query: 215 DVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYN 274
              +  ++  +M+   V  +L+TYN ++  +CK G   +A  + D M   G+S +IVTYN
Sbjct: 248 IKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYN 307

Query: 275 SLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAK 332
           +LI G CRE +  EA ++   +K  G  PN +TY TLIDG+C    L +AL L   + ++
Sbjct: 308 TLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSR 367

Query: 333 GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
           G+ P +VTYN ++   CK+G    A +++ EM E+ I P  +T   LI+ + ++ +   A
Sbjct: 368 GLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKA 427

Query: 393 MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
           +++++ M E GL  D  TY  LIHGFC   +M+ A  L   M+     P+   Y+ +V G
Sbjct: 428 IQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLG 487

Query: 453 YCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGI 509
           YC + +    L+L  E   + L  +V+ YR +I   CK+ K   A+ L   M   GI
Sbjct: 488 YCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDTGI 544



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 125/515 (24%), Positives = 245/515 (47%), Gaps = 9/515 (1%)

Query: 44  HKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEK 103
            K L+ L     +P L  AF          ++H+ +S   ++ +L     +  AQ++L +
Sbjct: 6   QKTLILLATLIKVPPLK-AFSLLNSPNFHGFQHTHESISILLRLLLSGNLYSHAQSLLLQ 64

Query: 104 IA----LRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVH 159
           +        F ++ S+L+ + +  +  +  S +   ++  Y   +     +  F++M   
Sbjct: 65  VISGKIQSQFFTSSSLLHYVTE-SETSETKSRLYEVMINAYVQSQSLDSSISYFNEMVDK 123

Query: 160 NLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKV 219
             +P  +    LL  +      +  W+ + +  ++ V  +++ + ++I  CC++ +++K 
Sbjct: 124 GFVPGSNCFNNLLTFVVGSSSFNQWWRFFNE-SKIKVDLDVYSFGIVIKGCCEAGEIEKS 182

Query: 220 EKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHG 279
             LL E+       ++  Y TLI   CK+G   +A  +   M + G+  +  TY  LIHG
Sbjct: 183 FDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFGLVANEWTYTVLIHG 242

Query: 280 FCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPG 337
             + G  ++   ++  ++  G  PN  TY  +++ +C+    ++A +L + M  +GV   
Sbjct: 243 LFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCN 302

Query: 338 VVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKN 397
           +VTYN+++  LC+E +  +AN+++++M    I P+ +T NTLI+ +C +G    A+ +  
Sbjct: 303 IVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCR 362

Query: 398 RMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKN 457
            +   GL     TY  L+ GFCK  +   A +++  M + G  PS  +Y+ L+D +   +
Sbjct: 363 DLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMD 422

Query: 458 NEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYT 517
           N E  ++L       GL  DV  Y  LI  FC K +++ A RLF LM    +  + VIY 
Sbjct: 423 NMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYN 482

Query: 518 SLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYR 552
           ++   Y + G       +  +M  + L   +  YR
Sbjct: 483 TMVLGYCKEGSSYRALRLFREMEEKELPPNVASYR 517



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 95/300 (31%), Positives = 174/300 (58%), Gaps = 2/300 (0%)

Query: 145 MTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYN 204
           + + G +++++M+   + P+L+    ++N   KD  T   +K++ +M + GV  NI  YN
Sbjct: 248 IKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYN 307

Query: 205 VLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMERE 264
            LI   C+    ++  K++ +M+   +  +L TYNTLI  +C  G   +AL++   ++  
Sbjct: 308 TLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSR 367

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEA 322
           G+SP +VTYN L+ GFC++G    A ++ +++  +G  P+ +TYT LID + R +++E+A
Sbjct: 368 GLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKA 427

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
           ++LR  M   G+ P V TY+ ++   C +G++ +A+RL   M  KK+ P+ V  NT++  
Sbjct: 428 IQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLG 487

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           YCK G +  A+++   M E  L  +  +Y+ +I   CK ++   A+ L+  M+D G  PS
Sbjct: 488 YCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDTGIDPS 547



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 72/234 (30%), Positives = 120/234 (51%), Gaps = 2/234 (0%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           +V DQM+   + P+L     L++             + + +   G+  ++  YN+L+   
Sbjct: 324 KVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGF 383

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           CK  D     K++ EME + ++    TY  LI  + +     +A+ ++  ME  G++PD+
Sbjct: 384 CKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDV 443

Query: 271 VTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
            TY+ LIHGFC +G+M EA RLF+ +  K   PN V Y T++ GYC+      ALRL   
Sbjct: 444 HTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFRE 503

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
           M  K + P V +Y  ++  LCKE + ++A  L+ +M +  I P +   N +  A
Sbjct: 504 MEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDTGIDPSDSILNLISRA 557



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 66/292 (22%), Positives = 123/292 (42%), Gaps = 34/292 (11%)

Query: 306 YTTLIDGYCRANDLEEALRLREVMAAKGVYPG---------------------------- 337
           Y  +I+ Y ++  L+ ++     M  KG  PG                            
Sbjct: 97  YEVMINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFNESK 156

Query: 338 ------VVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTAS 391
                 V ++  +++  C+ G I  +  LL E+ E   +P+ V   TLI+  CK G+   
Sbjct: 157 IKVDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEK 216

Query: 392 AMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVD 451
           A  +   M + GL+ +++TY  LIHG  K        E+   M + G  P+  +Y+ +++
Sbjct: 217 AKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMN 276

Query: 452 GYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILG 511
            +C     +   KL DE   RG+  ++  Y  LI   C++ K + A ++ + M+ +GI  
Sbjct: 277 QHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINP 336

Query: 512 DSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNE 563
           + + Y +L   +   G+      +  D+  R L  +L  Y    + + K  +
Sbjct: 337 NLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGD 388



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/133 (24%), Positives = 63/133 (47%)

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           L+  +A +   +  +Q+   M    L P +H  +VL++        +   +++K MV   
Sbjct: 414 LIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKK 473

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
           +  N  +YN ++   CK     +  +L  EME K++  ++ +Y  +I + CK+    EA 
Sbjct: 474 LEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAE 533

Query: 256 AVQDRMEREGISP 268
            + ++M   GI P
Sbjct: 534 GLVEKMIDTGIDP 546



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 43/203 (21%), Positives = 78/203 (38%), Gaps = 36/203 (17%)

Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSP-SYC------------------------- 444
           Y+ +I+ + +++ +D +      M+D GF P S C                         
Sbjct: 97  YEVMINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFNESK 156

Query: 445 --------SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDY 496
                   S+  ++ G C     E    LL E    G   +V +Y  LI   CK+ +++ 
Sbjct: 157 IKVDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEK 216

Query: 497 AQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSA 556
           A+ LF  M   G++ +   YT L +  ++ G  K   ++ + M    +   L  Y     
Sbjct: 217 AKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMN 276

Query: 557 SYAKDNEILDLF--WSHVVDRGL 577
            + KD    D F  +  + +RG+
Sbjct: 277 QHCKDGRTKDAFKLFDEMRERGV 299


>gi|302780004|ref|XP_002971777.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
 gi|300160909|gb|EFJ27526.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
          Length = 556

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 150/539 (27%), Positives = 248/539 (46%), Gaps = 72/539 (13%)

Query: 57  PSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKH-FKSAQNMLEKIALRDFLSTPSV 115
           P L+  FF WA      YKH + S+  ++ IL K+ H F++ +        +D L +   
Sbjct: 7   PDLAIQFFDWAGEQ-DGYKHDVHSYNHLLDILVKSGHQFRTGK------VYKDLLHSGCS 59

Query: 116 LNALVKIHDDPDGNSHVLSWLVIFYANLKMTQD--GLQVFDQMRVHNLMPHLHACTVLLN 173
            N              ++++ ++   N K  Q    L+    +   ++ P ++    L++
Sbjct: 60  PN--------------LVTFKILIRGNCKAGQATRALEFLRALDEFSVAPDVYIFNFLIH 105

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
            L KD   D   K+++ M    V  +I  YN +I   CKS +++K  +LL EM  +  ++
Sbjct: 106 GLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKS 165

Query: 234 --DLFTYNTLI-ALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREAR 290
             D+ TYNTLI A  CK G   EAL + D M+  G +PD++TYNS+IH  C  GR+ EA 
Sbjct: 166 APDIVTYNTLINAGICKDGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAA 225

Query: 291 RLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
            + + +   +P+ VT+ TL+DG+C+A  L  AL + E M  + + P V+TY  ++  LC+
Sbjct: 226 EILKTMS-CSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCR 284

Query: 351 EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTA---------SAMKVKNRMLE 401
            G+++ A  LL E+  +   PD +   +L++  CK G+           SA ++   M+ 
Sbjct: 285 VGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVS 344

Query: 402 AGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEA 461
             ++   FTY  ++ G  K   +  A  L+  ++  G+ P   +Y+ L+DG C  N    
Sbjct: 345 INMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVRE 404

Query: 462 LLKLLDEFVSR--------------GLC----VD-----------------VSVYRALIR 486
              L DE  S               GLC    VD                 V VY +LI 
Sbjct: 405 ACDLADEMASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLID 464

Query: 487 RFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
             CK +++D A  + + M+G G+  D   Y  L  +    G       + D+M  R  +
Sbjct: 465 GLCKSDRMDDACVVLDAMRGQGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEMVARGFL 523



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 116/459 (25%), Positives = 205/459 (44%), Gaps = 86/459 (18%)

Query: 57  PSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVL 116
           P  +   F+  ES+  N    + ++ T+I  L K+ + + A+ +LE++  R   S P ++
Sbjct: 113 PDQAVKLFENMESSRVN--PDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIV 170

Query: 117 --NALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNS 174
             N L+      DG+                 ++ L++ D M++    P +     ++++
Sbjct: 171 TYNTLINAGICKDGD----------------VEEALEILDGMKLAGPAPDVITYNSIIHA 214

Query: 175 LAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRAD 234
           L    +   V +  + +  +    ++  +N L+   CK+  + +  ++L EM  +++  D
Sbjct: 215 LC---VAGRVVEAAEILKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPD 271

Query: 235 LFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR 294
           + TY  L+   C+ G    A  + + + R+G  PD++ Y SL+ G C+ G + EA +L +
Sbjct: 272 VITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVK 331

Query: 295 DI----------------------------------------------KGATPNHVTYTT 308
           ++                                              +G  P+ VTY T
Sbjct: 332 EMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNT 391

Query: 309 LIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKK 368
           LIDG C+AN + EA  L + MA+ G +P  VT  S++  LC+ GR+ DA  L+ EM+ K+
Sbjct: 392 LIDGLCKANRVREACDLADEMASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKR 451

Query: 369 IAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYK----ALIHGFCKAKEM 424
            AP+ V   +LI+  CK      A  V + M   G+ LD F Y+    ++IHG   A+ M
Sbjct: 452 HAPNVVVYTSLIDGLCKSDRMDDACVVLDAMRGQGVALDDFAYRKLIVSMIHGGRVAEAM 511

Query: 425 DIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALL 463
            +  E    M+  GF P         DG  +K  EEA +
Sbjct: 512 AMYDE----MVARGFLP---------DGSTSKTLEEAAM 537



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 61/301 (20%), Positives = 118/301 (39%), Gaps = 47/301 (15%)

Query: 38  LTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSA 97
           L     + +L+N    C +  +  AF+   E     Y   + ++ +++  L K+   + A
Sbjct: 269 LPDVITYTILVN--GLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEA 326

Query: 98  QNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMR 157
             ++++++ R+ L+                                           +M 
Sbjct: 327 HKLVKEMSAREILA-------------------------------------------EMV 343

Query: 158 VHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVD 217
             N++P L    ++L  L KD        +   +V  G V ++  YN LI   CK++ V 
Sbjct: 344 SINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVR 403

Query: 218 KVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLI 277
           +   L  EM       +  T  +++   C+ G   +A ++   M R+  +P++V Y SLI
Sbjct: 404 EACDLADEMASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLI 463

Query: 278 HGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVY 335
            G C+  RM +A  +   ++  G   +   Y  LI        + EA+ + + M A+G  
Sbjct: 464 DGLCKSDRMDDACVVLDAMRGQGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEMVARGFL 523

Query: 336 P 336
           P
Sbjct: 524 P 524


>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 680

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 137/495 (27%), Positives = 251/495 (50%), Gaps = 28/495 (5%)

Query: 88  LTKNKHFKSAQNMLEKIALR----DFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANL 143
           L K+KH+ +  ++ +K+  R    +F++   ++N   ++   P   S +   L + Y   
Sbjct: 80  LVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILINCFCQLGLIPFAFSVLAKILKMGYEPD 139

Query: 144 KMTQDGL--------QVFDQMRVHN----LMPHLHACT--VLLNSLAKDRLT----DMVW 185
            +T +          Q+   +  H+    L  HL   +   L+N L K   T    +++ 
Sbjct: 140 TITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALELLR 199

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
           +V  K+VQL VV    +Y+ +I + CK  +V+    L  EM  + + +++ TY+ LI+ +
Sbjct: 200 RVDGKLVQLDVV----MYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGF 255

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNH 303
           C  G   +A+ + ++M  E I+PD+ T+N L+  FC+EGR++EA+     +  +G  P+ 
Sbjct: 256 CIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDI 315

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
           VTY +L+DGYC  N++  A  +   M+ +GV   V +YN ++   CK   +  A +L  E
Sbjct: 316 VTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKE 375

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
           M+ K+I P+ +T N+LI+  CK G  + A+++ + M + G   D  TY +++   CK   
Sbjct: 376 MHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHL 435

Query: 424 MDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRA 483
           +D A  LL  + D G  P+  +Y+ L+DG C     E    + ++ + +G  + V+ Y  
Sbjct: 436 VDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTV 495

Query: 484 LIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRR 543
           +I+ FC     D A  L + M+ N  + D++ Y  +  + +   E      +L +M  R 
Sbjct: 496 MIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEIIICSLFDKDENDKAEKLLREMITRG 555

Query: 544 LMITLKIYRSFSASY 558
           L+ +   Y S+S S+
Sbjct: 556 LLYSFLEYGSWSLSF 570



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 113/391 (28%), Positives = 195/391 (49%), Gaps = 3/391 (0%)

Query: 131 HVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKK 190
           H  S    F+ N  +  D + +F+ +   N  P       +L SL K +    V  +++K
Sbjct: 37  HSFSTSTTFHNNNDVV-DAVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQK 95

Query: 191 MVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGM 250
           M   G+  N   +N+LI+  C+   +     +L ++       D  T NT I  +C KG 
Sbjct: 96  MEYRGIKPNFVNFNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQ 155

Query: 251 HYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKG--ATPNHVTYTT 308
            ++AL   D++   G   D V+Y +LI+G C+ G  R A  L R + G     + V Y+T
Sbjct: 156 IHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYST 215

Query: 309 LIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKK 368
           +ID  C+  ++ +A  L   M ++ +   +VTY++++   C  G+++DA  L N+M  + 
Sbjct: 216 IIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSEN 275

Query: 369 IAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAK 428
           I PD  T N L++A+CK G    A      M++ G+  D  TY +L+ G+C   E+++AK
Sbjct: 276 INPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAK 335

Query: 429 ELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRF 488
            +L  M   G + +  SY+ +++G+C     +  +KL  E   + +  +V  Y +LI   
Sbjct: 336 SILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGL 395

Query: 489 CKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
           CK  ++ YA  L +LM   G   D + Y+S+
Sbjct: 396 CKSGRISYALELIDLMHDRGQQPDIITYSSI 426



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 106/377 (28%), Positives = 184/377 (48%), Gaps = 11/377 (2%)

Query: 203 YNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRME 262
           +  ++ +  KS     V  L  +ME++ ++ +   +N LI  +C+ G+   A +V  ++ 
Sbjct: 73  FGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILINCFCQLGLIPFAFSVLAKIL 132

Query: 263 REGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLE 320
           + G  PD +T N+ I GFC +G++ +A      +   G   + V+Y TLI+G C+  +  
Sbjct: 133 KMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETR 192

Query: 321 EALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLI 380
            AL L   +  K V   VV Y++I+  +CK+  + DA  L +EM  ++I+ + VT + LI
Sbjct: 193 AALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALI 252

Query: 381 NAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFS 440
           + +C +G    A+ + N+M    +  D +T+  L+  FCK   +  AK  L  M+  G  
Sbjct: 253 SGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIK 312

Query: 441 PSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRL 500
           P   +Y+ L+DGYC  N       +L+    RG+   V  Y  +I  FCK + VD A +L
Sbjct: 313 PDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKL 372

Query: 501 FNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAK 560
           F  M    I  + + Y SL     ++G      +++D M+ R     +  Y S   +  K
Sbjct: 373 FKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCK 432

Query: 561 DNEILDLFWSHVVDRGL 577
           +         H+VD+ +
Sbjct: 433 N---------HLVDKAI 440



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 106/420 (25%), Positives = 195/420 (46%), Gaps = 53/420 (12%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           +D + +F++M   N+ P ++   +L+++  K+            M++ G+  +I  YN L
Sbjct: 262 KDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSL 321

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           +   C  ++V+  + +L  M  + V A + +YN +I  +CK  M  +A+ +   M  + I
Sbjct: 322 MDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQI 381

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
            P+++TYNSLI G C+ GR+  A  L   +  +G  P+ +TY++++D  C+ + +++A+ 
Sbjct: 382 FPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIA 441

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT---LIN 381
           L   +  +G+ P + TY  ++  LCK GR+ DA  +  ++  K     N+T NT   +I 
Sbjct: 442 LLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGY---NLTVNTYTVMIQ 498

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
            +C  G    A+ + ++M +   + D  TY+ +I       E D A++LL  M+  G   
Sbjct: 499 GFCSHGLFDEALSLLSKMKDNSCIPDAITYEIIICSLFDKDENDKAEKLLREMITRGLLY 558

Query: 442 SYCSY-SWLVDGY-------------CNKNNEEA-LLKLLDEFV---------------- 470
           S+  Y SW +                C  + E     KLL E +                
Sbjct: 559 SFLEYGSWSLSFMAAPAHFLNNDSLQCTSSQESGNWAKLLLERIYCDCVLTKSNMRDKDV 618

Query: 471 --------------SRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIY 516
                          +G  +DV+ Y  +I+ FC     D +  L + M+ NG + D+V Y
Sbjct: 619 ECPSVIIYSTCDWSKQGYILDVNTYTVMIQGFCSHGLFDESLALLSKMEVNGCIPDAVTY 678



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 73/268 (27%), Positives = 116/268 (43%)

Query: 297 KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRD 356
           +  TP  + +  ++    ++      L L + M  +G+ P  V +N ++   C+ G I  
Sbjct: 64  QNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILINCFCQLGLIPF 123

Query: 357 ANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIH 416
           A  +L ++ +    PD +T NT I  +C  G    A+   ++++  G  LDQ +Y  LI+
Sbjct: 124 AFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLIN 183

Query: 417 GFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCV 476
           G CK  E   A ELL  +           YS ++D  C   N      L  E VSR +  
Sbjct: 184 GLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISS 243

Query: 477 DVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDIL 536
           ++  Y ALI  FC   K+  A  LFN M    I  D   +  L  A+ + G  K   + L
Sbjct: 244 NIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGL 303

Query: 537 DDMYRRRLMITLKIYRSFSASYAKDNEI 564
             M ++ +   +  Y S    Y   NE+
Sbjct: 304 AMMMKQGIKPDIVTYNSLMDGYCLVNEV 331



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/205 (20%), Positives = 85/205 (41%)

Query: 354 IRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKA 413
           + DA  L N +  +   P ++    ++ +  K     + + +  +M   G+  +   +  
Sbjct: 51  VVDAVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNI 110

Query: 414 LIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
           LI+ FC+   +  A  +L  +L  G+ P   + +  + G+C K      L   D+ V+ G
Sbjct: 111 LINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALG 170

Query: 474 LCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACS 533
             +D   Y  LI   CK  +   A  L   + G  +  D V+Y+++  +  +        
Sbjct: 171 FHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAF 230

Query: 534 DILDDMYRRRLMITLKIYRSFSASY 558
           D+  +M  RR+   +  Y +  + +
Sbjct: 231 DLYSEMVSRRISSNIVTYSALISGF 255



 Score = 48.1 bits (113), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 39/194 (20%), Positives = 78/194 (40%), Gaps = 2/194 (1%)

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
           D   A+ + N +L          +  ++    K+K       L   M   G  P++ +++
Sbjct: 50  DVVDAVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFN 109

Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGN 507
            L++ +C          +L + +  G   D       I+ FC K ++  A    + +   
Sbjct: 110 ILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVAL 169

Query: 508 GILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDL 567
           G   D V Y +L     + GE +A  ++L  +  + + + + +Y +   S  KD  + D 
Sbjct: 170 GFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDA 229

Query: 568 F--WSHVVDRGLMS 579
           F  +S +V R + S
Sbjct: 230 FDLYSEMVSRRISS 243



 Score = 38.9 bits (89), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 17/41 (41%), Positives = 25/41 (60%)

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYN 274
           D+ TY  +I  +C  G+  E+LA+  +ME  G  PD VTY+
Sbjct: 639 DVNTYTVMIQGFCSHGLFDESLALLSKMEVNGCIPDAVTYD 679


>gi|414586846|tpg|DAA37417.1| TPA: hypothetical protein ZEAMMB73_755201 [Zea mays]
          Length = 612

 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 127/457 (27%), Positives = 224/457 (49%), Gaps = 5/457 (1%)

Query: 74  YKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVL 133
           ++H+  S  +M H+L  ++    A  +L  +  R    +P  L  L+      D  + ++
Sbjct: 119 FRHTPASFLSMSHLLIAHRLSHLALPLLRLLVSRLGRDSPPRLLPLLVSAASTDDPAPLV 178

Query: 134 SWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQ 193
           S +   YA+  +  DG  +        +   + A + L+N L         +  Y  ++ 
Sbjct: 179 SAVAKVYADEGLLPDGCSLLLLALRRGIRVPMPAWSDLMNRLPS---VPEAYAFYLHLLD 235

Query: 194 LGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYE 253
            GV      +N+L+    +S  +     +  EM  + V+  + T+NTL++  CK      
Sbjct: 236 AGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLNN 295

Query: 254 ALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLID 311
           A A++  M + GI+PD+ TY + I G C+ GR+++A  +F ++  +G  PN V  TTLID
Sbjct: 296 ANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLID 355

Query: 312 GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAP 371
            +C+  D+   L LR  MA +GV   +V YN+++   C+   ++ AN ++ EM +  + P
Sbjct: 356 AHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKP 415

Query: 372 DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
           D VT  TLI+  CK G+  +AM++K  M + G+ LD  TY ALI G  KA     A+ +L
Sbjct: 416 DKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERIL 475

Query: 432 FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
             M++AG  P   +Y+ ++D +C   + +   K L E  ++G    +  Y  ++  FC  
Sbjct: 476 CEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSL 535

Query: 492 EKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
            ++  A  L N M   G+  + + Y  L   + + G+
Sbjct: 536 GQMKNADMLLNAMLNIGVCPNDITYNILLDGHCKHGK 572



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 108/345 (31%), Positives = 178/345 (51%), Gaps = 7/345 (2%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
            VFD+M    + P +     L++ + K    +    +   M + G+  +++ Y   I   
Sbjct: 263 NVFDEMLRRGVQPTVVTFNTLMSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGL 322

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           CK+  +    ++  EM  + +  +     TLI  +CK+G     L ++  M   G+  D+
Sbjct: 323 CKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADL 382

Query: 271 VTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREV 328
           V YN+L++GFCR   M+ A  +  +++  G  P+ VTYTTLIDG C+  +L+ A+ +++ 
Sbjct: 383 VAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQE 442

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M+ +GV    VTY +++  L K GR  DA R+L EM E  + PDN T   +I+A+CK GD
Sbjct: 443 MSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGD 502

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
             +  K    M   G      TY  +++GFC   +M  A  LL  ML+ G  P+  +Y+ 
Sbjct: 503 VKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLLNAMLNIGVCPNDITYNI 562

Query: 449 LVDGYCNKNNEEALLKLLDEFVS-RGLCVDVSVYRALIRRFCKKE 492
           L+DG+C        ++  +E  S +G+  D  VY +LI  F KK+
Sbjct: 563 LLDGHCKHGK----VRDTEELKSAKGMVSDFGVYTSLINEFVKKK 603



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 90/280 (32%), Positives = 151/280 (53%), Gaps = 2/280 (0%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEA 322
           G+ P+   +N L+    R G++  AR +F ++  +G  P  VT+ TL+ G C+A+DL  A
Sbjct: 237 GVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLNNA 296

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
             LR +MA  G+ P V TY + ++ LCK GRI+DA  +  EM E+ + P+ V   TLI+A
Sbjct: 297 NALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDA 356

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +CK GD  + ++++  M   G+  D   Y AL++GFC+ ++M  A +++  M   G  P 
Sbjct: 357 HCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPD 416

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ L+DG C +   +  +++  E    G+ +D   Y ALI    K  +   A+R+  
Sbjct: 417 KVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILC 476

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRR 542
            M   G+  D+  YT +  A+ + G+ K     L +M  +
Sbjct: 477 EMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNK 516



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 85/278 (30%), Positives = 151/278 (54%), Gaps = 5/278 (1%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           QD +++F++M    L P+    T L+++  K+       ++  +M   GV A++  YN L
Sbjct: 329 QDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNAL 388

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           ++  C+  D+     ++ EM    ++ D  TY TLI   CK+G    A+ ++  M  EG+
Sbjct: 389 VNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGV 448

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
           + D VTY +LI G  + GR  +A R+  ++   G  P++ TYT +ID +C+  D++   +
Sbjct: 449 ALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFK 508

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
             + M  KG  PG+VTYN ++   C  G++++A+ LLN M    + P+++T N L++ +C
Sbjct: 509 HLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLLNAMLNIGVCPNDITYNILLDGHC 568

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAK 422
           K G      ++K+     G++ D   Y +LI+ F K K
Sbjct: 569 KHGKVRDTEELKS---AKGMVSDFGVYTSLINEFVKKK 603



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 115/234 (49%)

Query: 333 GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
           GV P    +N ++R + + G++  A  + +EM  + + P  VT NTL++  CK  D  +A
Sbjct: 237 GVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLNNA 296

Query: 393 MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
             ++  M +AG+  D +TY A I G CK   +  A E+   M + G +P+    + L+D 
Sbjct: 297 NALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDA 356

Query: 453 YCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGD 512
           +C + +  A L+L  E  +RG+  D+  Y AL+  FC+   +  A  +   M+ +G+  D
Sbjct: 357 HCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPD 416

Query: 513 SVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
            V YT+L     + GE     ++  +M    + +    Y +  +  +K    +D
Sbjct: 417 KVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVD 470



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/165 (23%), Positives = 77/165 (46%), Gaps = 6/165 (3%)

Query: 399 MLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNK-- 456
           +L+AG+  +   +  L+    ++ ++  A+ +   ML  G  P+  +++ L+ G C    
Sbjct: 233 LLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASD 292

Query: 457 -NNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVI 515
            NN  AL  L+      G+  DV  Y A I+  CK  ++  A  +F  M   G+  ++V+
Sbjct: 293 LNNANALRGLM---AKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVV 349

Query: 516 YTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAK 560
            T+L  A+ + G+  A  ++  +M  R +   L  Y +    + +
Sbjct: 350 LTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCR 394



 Score = 45.8 bits (107), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 32/147 (21%), Positives = 61/147 (41%), Gaps = 4/147 (2%)

Query: 434 MLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEK 493
           +LDAG  P    ++ L+          +   + DE + RG+   V  +  L+   CK   
Sbjct: 233 LLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASD 292

Query: 494 VDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRS 553
           ++ A  L  LM   GI  D   Y +      + G  +   ++ ++M  R L     +  +
Sbjct: 293 LNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTT 352

Query: 554 FSASYAKDNEI---LDLFWSHVVDRGL 577
              ++ K+ ++   L+L W  +  RG+
Sbjct: 353 LIDAHCKEGDVTAGLELRW-EMATRGV 378


>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
          Length = 1244

 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 115/394 (29%), Positives = 208/394 (52%), Gaps = 2/394 (0%)

Query: 148  DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
            + + + D+M      P L    V++N L K   TD+ + +  KM Q  +   + +YN +I
Sbjct: 818  EAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTII 877

Query: 208  HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
               CK   +D    L  EME K +R ++ TY++LI+  C  G   +A  +   M    I+
Sbjct: 878  DGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKIN 937

Query: 268  PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
            PD+ T+++LI  F +EG++ EA +L+ ++  +   P+ VTY++LI+G+C  + L+EA ++
Sbjct: 938  PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQM 997

Query: 326  REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
             E M +K  +P VVTYN++++  CK  R+ +   +  EM+++ +  + VT N LI    +
Sbjct: 998  FEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQ 1057

Query: 386  IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
             GD   A ++   M+  G+  +  TY  L+ G CK  +++ A  +   +  +   P+  +
Sbjct: 1058 AGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYT 1117

Query: 446  YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
            Y+ +++G C     E    L      +G+  DV  Y  +I  FC+K   + A  LF  M+
Sbjct: 1118 YNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMK 1177

Query: 506  GNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
             +G L +S  Y +L  A  R G+ +A ++++ +M
Sbjct: 1178 EDGTLPNSGCYNTLIRARLRDGDREASAELIKEM 1211



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 133/476 (27%), Positives = 234/476 (49%), Gaps = 11/476 (2%)

Query: 95   KSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFD 154
            K ++N L ++ L D ++   +   +VK    P     ++ +  +  A  KM +  + +  
Sbjct: 665  KLSRNGLSELKLDDAVA---LFGEMVKSRPFP----SIIEFSKLLSAIAKMNKFDVVISL 717

Query: 155  QMRVHNL-MPHLH-ACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCK 212
              ++ NL +PH H   ++L+N   +     +   V  KM++LG   NI   + L++  C 
Sbjct: 718  GEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCH 777

Query: 213  SSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVT 272
            S  + +   L+ +M     + +  T+NTLI          EA+A+ DRM  +G  PD+VT
Sbjct: 778  SKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVT 837

Query: 273  YNSLIHGFCREGRMREARRLFRDIKGA--TPNHVTYTTLIDGYCRANDLEEALRLREVMA 330
            Y  +++G C+ G    A  L   ++     P  + Y T+IDG C+   +++AL L + M 
Sbjct: 838  YGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEME 897

Query: 331  AKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTA 390
             KG+ P VVTY+S++  LC  GR  DA+RLL++M E+KI PD  T + LI+A+ K G   
Sbjct: 898  TKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLV 957

Query: 391  SAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLV 450
             A K+ + M++  +     TY +LI+GFC    +D AK++   M+     P   +Y+ L+
Sbjct: 958  EAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLI 1017

Query: 451  DGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGIL 510
             G+C     E  +++  E   RGL  +   Y  LI+   +    D AQ +F  M  +G+ 
Sbjct: 1018 KGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVP 1077

Query: 511  GDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
             + + Y +L     + G+ +    + + + R ++  T+  Y        K  ++ D
Sbjct: 1078 PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVED 1133



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 123/417 (29%), Positives = 197/417 (47%), Gaps = 37/417 (8%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D + +F  M      P +     LL+++ K +  D+V  + KKM  LG+  +++ +N++I
Sbjct: 171 DAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVI 230

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           +  C    V     +L +M       D  T  +L+  +C++    +A+++ D+M   G  
Sbjct: 231 NCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYK 290

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
           PDIV YN++I   C+  R+ +A   F++I  KG  PN VTYT L++G C ++   +A RL
Sbjct: 291 PDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARL 350

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVT---------- 375
              M  K + P V+TY+++L    K G++ +A  L  EM    I PD VT          
Sbjct: 351 LSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCL 410

Query: 376 ------------------C-------NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
                             C       NTLIN +CK       MK+   M + GL+ +  T
Sbjct: 411 HDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVT 470

Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFV 470
           Y  LI GF +A ++D A+E    M   G SP   +Y+ L+ G C+    E  L + ++  
Sbjct: 471 YNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQ 530

Query: 471 SRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
            R + +D+  Y  +IR  CK  KV+ A  LF  +   G+  D V YT++       G
Sbjct: 531 KREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKG 587



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 136/502 (27%), Positives = 230/502 (45%), Gaps = 37/502 (7%)

Query: 19   AIMLKGHWAKL-LNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHS 77
            A+ + G   KL   PNI + L+S      LLN Y  CH   +S A     +  V  Y+ +
Sbjct: 749  ALAVLGKMMKLGYEPNIVT-LSS------LLNGY--CHSKRISEAVALVDQMFVTGYQPN 799

Query: 78   LQSHWTMIHILTKNKHFKSAQNMLEKIALR----DFLSTPSVLNALVKIHDDPDGNSHVL 133
              +  T+IH L  +     A  +++++  +    D ++   V+N L K  D         
Sbjct: 800  TVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGD--------- 850

Query: 134  SWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQ 193
                        T     + ++M    L P +     +++ L K +  D    ++K+M  
Sbjct: 851  ------------TDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMET 898

Query: 194  LGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYE 253
             G+  N+  Y+ LI   C         +LL +M  + +  D+FT++ LI  + K+G   E
Sbjct: 899  KGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVE 958

Query: 254  ALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLID 311
            A  + D M +  I P IVTY+SLI+GFC   R+ EA+++F  +  K   P+ VTY TLI 
Sbjct: 959  AEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIK 1018

Query: 312  GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAP 371
            G+C+   +EE + +   M+ +G+    VTYN +++ L + G    A  +  EM    + P
Sbjct: 1019 GFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPP 1078

Query: 372  DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
            + +T NTL++  CK G    AM V   +  + +    +TY  +I G CKA +++   +L 
Sbjct: 1079 NIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLF 1138

Query: 432  FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
              +   G  P   +Y+ ++ G+C K ++E    L  E    G   +   Y  LIR   + 
Sbjct: 1139 CNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRD 1198

Query: 492  EKVDYAQRLFNLMQGNGILGDS 513
               + +  L   M+  G  GD+
Sbjct: 1199 GDREASAELIKEMRSCGFAGDA 1220



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 125/406 (30%), Positives = 197/406 (48%), Gaps = 7/406 (1%)

Query: 171 LLNSLAKDRLTDM----VWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEM 226
           L   L+K RL D+       ++  MV+     +I  +N L+ A  K    D V  L  +M
Sbjct: 155 LRERLSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKM 214

Query: 227 EFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRM 286
           E   +R DL+T+N +I  +C       AL++  +M + G  PD VT  SL++GFCR  R+
Sbjct: 215 EVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRV 274

Query: 287 REARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSI 344
            +A  L   +   G  P+ V Y  +ID  C+   + +A    + +  KG+ P VVTY ++
Sbjct: 275 SDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTAL 334

Query: 345 LRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGL 404
           +  LC   R  DA RLL++M +KKI P+ +T + L++A+ K G    A ++   M+   +
Sbjct: 335 VNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSI 394

Query: 405 MLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLK 464
             D  TY +LI+G C    +D A ++   M+  G      SY+ L++G+C     E  +K
Sbjct: 395 DPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMK 454

Query: 465 LLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYW 524
           L  E   RGL  +   Y  LI+ F +   VD AQ  F+ M   GI  D   Y  L     
Sbjct: 455 LFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLC 514

Query: 525 RAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWS 570
             GE +    I +DM +R + + +  Y +      K  ++ +  WS
Sbjct: 515 DNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEA-WS 559



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 99/346 (28%), Positives = 177/346 (51%), Gaps = 4/346 (1%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           S+L  ++K+  +PD     +  LV  +       D + + D+M      P + A   +++
Sbjct: 244 SILGKMLKLGYEPD--RVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIID 301

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
           SL K +  +  +  +K++ + G+  N+  Y  L++  C SS      +LL +M  K +  
Sbjct: 302 SLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITP 361

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           ++ TY+ L+  + K G   EA  + + M R  I PDIVTY+SLI+G C   R+ EA ++F
Sbjct: 362 NVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMF 421

Query: 294 RDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
             +  KG   + V+Y TLI+G+C+A  +E+ ++L   M+ +G+    VTYN++++   + 
Sbjct: 422 DLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQA 481

Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
           G +  A    ++M+   I+PD  T N L+   C  G+   A+ +   M +  + LD  TY
Sbjct: 482 GDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTY 541

Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKN 457
             +I G CK  +++ A  L   +   G  P   +Y+ ++ G C K 
Sbjct: 542 TTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKG 587



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 106/396 (26%), Positives = 194/396 (48%), Gaps = 16/396 (4%)

Query: 177 KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLF 236
           ++R++D V  V  KMV++G   +I  YN +I + CK+  V+       E+E K +R ++ 
Sbjct: 271 RNRVSDAVSLV-DKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVV 329

Query: 237 TYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI 296
           TY  L+   C      +A  +   M ++ I+P+++TY++L+  F + G++ EA+ LF ++
Sbjct: 330 TYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEM 389

Query: 297 --KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRI 354
                 P+ VTY++LI+G C  + ++EA ++ ++M +KG    VV+YN+++   CK  R+
Sbjct: 390 VRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRV 449

Query: 355 RDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKAL 414
            D  +L  EM+++ +  + VT NTLI  + + GD   A +  ++M   G+  D +TY  L
Sbjct: 450 EDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNIL 509

Query: 415 IHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGL 474
           + G C   E++ A  +   M          +Y+ ++ G C     E    L      +GL
Sbjct: 510 LGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGL 569

Query: 475 CVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGIL--------GDSVIYTSLAYAYWRA 526
             D+  Y  ++   C K  +   + L+  M+  G++        GD  +   L       
Sbjct: 570 KPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIKKMLSC 629

Query: 527 G-EPKACSDILDDMYRRRLMITLKIYRSFSASYAKD 561
           G  P    DI   + ++     L + R+FS   + D
Sbjct: 630 GYAPSLLKDIKSGVCKK----ALSLLRAFSGKTSYD 661



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 142/616 (23%), Positives = 263/616 (42%), Gaps = 98/616 (15%)

Query: 54  CHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSA----QNMLEKIALRDF 109
           C    ++ AF  + E      + ++ ++  +++ L  +  +  A     +M++K    + 
Sbjct: 304 CKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNV 363

Query: 110 LSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQD-----------GL-------- 150
           ++  ++L+A VK       N  VL    +F   ++M+ D           GL        
Sbjct: 364 ITYSALLDAFVK-------NGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDE 416

Query: 151 --QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIH 208
             Q+FD M     +  + +   L+N   K +  +   K++++M Q G+V+N   YN LI 
Sbjct: 417 ANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQ 476

Query: 209 ACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISP 268
              ++ DVDK ++   +M+F  +  D++TYN L+   C  G   +AL + + M++  +  
Sbjct: 477 GFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDL 536

Query: 269 DIVTYNSLIHGFCREGRMREARRLF--RDIKGATPNHVTYTTLIDGYCRANDLEEALRLR 326
           DIVTY ++I G C+ G++ EA  LF    +KG  P+ VTYTT++ G C    L E   L 
Sbjct: 537 DIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALY 596

Query: 327 EVMAAKGVYP-------GVVTYN-----------------------------SILR---- 346
             M  +G+         G +T +                             S+LR    
Sbjct: 597 TKMKQEGLMKNDCTLSDGDITLSAELIKKMLSCGYAPSLLKDIKSGVCKKALSLLRAFSG 656

Query: 347 --------KLCKEG----RIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMK 394
                   KL + G    ++ DA  L  EM + +  P  +  + L++A  K+      + 
Sbjct: 657 KTSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVIS 716

Query: 395 VKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYC 454
           +  +M   G+  + +TY  LI+ FC+  ++ +A  +L  M+  G+ P+  + S L++GYC
Sbjct: 717 LGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYC 776

Query: 455 NKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSV 514
           +       + L+D+    G   +   +  LI       K   A  L + M   G   D V
Sbjct: 777 HSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLV 836

Query: 515 IYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVD 574
            Y  +     + G+     ++L+ M + +L   + IY +      K        + H+ D
Sbjct: 837 TYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCK--------YKHMDD 888

Query: 575 RGLMSKHIFKEMQLRN 590
               + ++FKEM+ + 
Sbjct: 889 ----ALNLFKEMETKG 900



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 117/233 (50%), Gaps = 2/233 (0%)

Query: 151  QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
            Q+F+ M   +  P +     L+    K +  +   +V+++M Q G+V N   YN+LI   
Sbjct: 996  QMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGL 1055

Query: 211  CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
             ++ D D  +++  EM    V  ++ TYNTL+   CK G   +A+ V + ++R  + P I
Sbjct: 1056 FQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTI 1115

Query: 271  VTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
             TYN +I G C+ G++ +   LF ++  KG  P+ V Y T+I G+CR    EEA  L + 
Sbjct: 1116 YTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKE 1175

Query: 329  MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
            M   G  P    YN+++R   ++G    +  L+ EM     A D  T   + N
Sbjct: 1176 MKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTN 1228



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 90/350 (25%), Positives = 163/350 (46%), Gaps = 24/350 (6%)

Query: 83   TMIHILTKNKHFKSAQNM---LEKIALRDFLSTPS-----------------VLNALVKI 122
            T+I  L K KH   A N+   +E   +R  + T S                 +L+ +++ 
Sbjct: 875  TIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIER 934

Query: 123  HDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTD 182
              +PD      S L+  +       +  +++D+M   ++ P +   + L+N        D
Sbjct: 935  KINPD--VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLD 992

Query: 183  MVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLI 242
               ++++ MV      ++  YN LI   CK   V++  ++  EM  + +  +  TYN LI
Sbjct: 993  EAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILI 1052

Query: 243  ALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGA--T 300
                + G    A  +   M  +G+ P+I+TYN+L+ G C+ G++ +A  +F  ++ +   
Sbjct: 1053 QGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 1112

Query: 301  PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRL 360
            P   TY  +I+G C+A  +E+   L   ++ KGV P VV YN+++   C++G   +A+ L
Sbjct: 1113 PTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADAL 1172

Query: 361  LNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
              EM E    P++   NTLI A  + GD  ++ ++   M   G   D  T
Sbjct: 1173 FKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST 1222


>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62930, chloroplastic; Flags: Precursor
 gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 115/395 (29%), Positives = 208/395 (52%), Gaps = 2/395 (0%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
            + + + D+M      P L     ++N L K    D+   + KKM +  + A++ +Y  +
Sbjct: 202 SEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTI 261

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           I A C   +V+    L  EM+ K +R ++ TYN+LI   C  G   +A  +   M    I
Sbjct: 262 IDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKI 321

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
           +P++VT+++LI  F +EG++ EA +L+ ++  +   P+  TY++LI+G+C  + L+EA  
Sbjct: 322 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 381

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           + E+M +K  +P VVTYN++++  CK  R+ +   L  EM+++ +  + VT NTLI    
Sbjct: 382 MFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLF 441

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           + GD   A K+  +M+  G+  D  TY  L+ G CK  +++ A  +   +  +   P   
Sbjct: 442 QAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIY 501

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
           +Y+ +++G C     E    L      +G+  +V +Y  +I  FC+K   + A  LF  M
Sbjct: 502 TYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREM 561

Query: 505 QGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
           + +G L +S  Y +L  A  R G+  A ++++ +M
Sbjct: 562 KEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEM 596



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 123/416 (29%), Positives = 201/416 (48%), Gaps = 4/416 (0%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           +VL  ++K+  +PD     LS L+  Y + K   + + + DQM V    P+      L++
Sbjct: 136 AVLGKMMKLGYEPD--IVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIH 193

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
            L           +  +MV  G   ++  Y  +++  CK  D+D    LL +ME   + A
Sbjct: 194 GLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEA 253

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           D+  Y T+I   C      +AL +   M+ +GI P++VTYNSLI   C  GR  +A RL 
Sbjct: 254 DVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLL 313

Query: 294 RDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
            D+  +   PN VT++ LID + +   L EA +L + M  + + P + TY+S++   C  
Sbjct: 314 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 373

Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
            R+ +A  +   M  K   P+ VT NTLI  +CK       M++   M + GL+ +  TY
Sbjct: 374 DRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTY 433

Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
             LI G  +A + D+A+++   M+  G  P   +YS L+DG C     E  L + +    
Sbjct: 434 NTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQK 493

Query: 472 RGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
             +  D+  Y  +I   CK  KV+    LF  +   G+  + +IYT++   + R G
Sbjct: 494 SKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKG 549



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 116/366 (31%), Positives = 192/366 (52%), Gaps = 2/366 (0%)

Query: 165 LHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLC 224
           L++  +L+N   +     +   V  KM++LG   +I   + L++  C    + +   L+ 
Sbjct: 115 LYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVD 174

Query: 225 EMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREG 284
           +M   + + +  T+NTLI          EA+A+ DRM   G  PD+ TY ++++G C+ G
Sbjct: 175 QMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRG 234

Query: 285 RMREARRLFRDIKGA--TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYN 342
            +  A  L + ++      + V YTT+ID  C   ++ +AL L   M  KG+ P VVTYN
Sbjct: 235 DIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYN 294

Query: 343 SILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEA 402
           S++R LC  GR  DA+RLL++M E+KI P+ VT + LI+A+ K G    A K+ + M++ 
Sbjct: 295 SLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 354

Query: 403 GLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEAL 462
            +  D FTY +LI+GFC    +D AK +   M+     P+  +Y+ L+ G+C     E  
Sbjct: 355 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEG 414

Query: 463 LKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYA 522
           ++L  E   RGL  +   Y  LI+   +    D AQ++F  M  +G+  D + Y+ L   
Sbjct: 415 MELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDG 474

Query: 523 YWRAGE 528
             + G+
Sbjct: 475 LCKYGK 480



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 127/416 (30%), Positives = 202/416 (48%), Gaps = 15/416 (3%)

Query: 173 NSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVR 232
           N L   +L D V  ++ +MVQ   + +I  +N L+ A  K +  D V  L   M+   + 
Sbjct: 54  NVLLDLKLDDAV-DLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRIS 112

Query: 233 ADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRL 292
            DL++YN LI  +C++     ALAV  +M + G  PDIVT +SL++G+C   R+ EA  L
Sbjct: 113 YDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVAL 172

Query: 293 FRD--IKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
                +    PN VT+ TLI G    N   EA+ L + M A+G  P + TY +++  LCK
Sbjct: 173 VDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCK 232

Query: 351 EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
            G I  A  LL +M + KI  D V   T+I+A C   +   A+ +   M   G+  +  T
Sbjct: 233 RGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVT 292

Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFV 470
           Y +LI   C       A  LL  M++   +P+  ++S L+D +  +       KL DE +
Sbjct: 293 YNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 352

Query: 471 SRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPK 530
            R +  D+  Y +LI  FC  +++D A+ +F LM       + V Y +L   + +A   +
Sbjct: 353 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVE 412

Query: 531 ACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKEM 586
              ++  +M +R L+     Y +          I  LF +   D   M++ IFK+M
Sbjct: 413 EGMELFREMSQRGLVGNTVTYNTL---------IQGLFQAGDCD---MAQKIFKKM 456



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 114/476 (23%), Positives = 208/476 (43%), Gaps = 59/476 (12%)

Query: 47  LLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIAL 106
           LLN Y  CH   +S A     +  V  Y+ +  +  T+IH L  +     A  +++++  
Sbjct: 156 LLNGY--CHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVA 213

Query: 107 R----DFLSTPSVLNALVKIHD--------------DPDGNSHVLSWLVIFYANLKMTQD 148
           R    D  +  +V+N L K  D                + +  + + ++    N K   D
Sbjct: 214 RGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVND 273

Query: 149 GLQVFDQMRVHNLMPHLHACTVLLNSLAK-DRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
            L +F +M    + P++     L+  L    R +D   ++   M++  +  N+  ++ LI
Sbjct: 274 ALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSD-ASRLLSDMIERKINPNVVTFSALI 332

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
            A  K   + + EKL  EM  + +  D+FTY++LI  +C      EA  + + M  +   
Sbjct: 333 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 392

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDIK------------------------------ 297
           P++VTYN+LI GFC+  R+ E   LFR++                               
Sbjct: 393 PNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKI 452

Query: 298 -------GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
                  G  P+ +TY+ L+DG C+   LE+AL + E +    + P + TYN ++  +CK
Sbjct: 453 FKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCK 512

Query: 351 EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
            G++ D   L   ++ K + P+ +   T+I+ +C+ G    A  +   M E G + +  T
Sbjct: 513 AGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGT 572

Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLL 466
           Y  LI    +  +   + EL+  M   GF     + S +++   +   E++ L++L
Sbjct: 573 YNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSYLEML 628



 Score = 91.7 bits (226), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 74/323 (22%), Positives = 142/323 (43%), Gaps = 11/323 (3%)

Query: 244 LYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGATPNH 303
           L+  +G+++ A +      RE +S +++    L       G M ++R L        P+ 
Sbjct: 32  LFSLRGVYFSAASYD---YREKLSRNVLLDLKLDDAVDLFGEMVQSRPL--------PSI 80

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
           V +  L+    + N  +  + L E M    +   + +YN ++   C+  ++  A  +L +
Sbjct: 81  VEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGK 140

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
           M +    PD VT ++L+N YC     + A+ + ++M       +  T+  LIHG     +
Sbjct: 141 MMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNK 200

Query: 424 MDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRA 483
              A  L+  M+  G  P   +Y  +V+G C + + +  L LL +     +  DV +Y  
Sbjct: 201 ASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTT 260

Query: 484 LIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRR 543
           +I   C  + V+ A  LF  M   GI  + V Y SL       G     S +L DM  R+
Sbjct: 261 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK 320

Query: 544 LMITLKIYRSFSASYAKDNEILD 566
           +   +  + +   ++ K+ ++++
Sbjct: 321 INPNVVTFSALIDAFVKEGKLVE 343


>gi|255574927|ref|XP_002528370.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532238|gb|EEF34042.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 712

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 129/456 (28%), Positives = 232/456 (50%), Gaps = 8/456 (1%)

Query: 126 PDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVW 185
           PD  S+ L  +V+ Y  +    D  +    M           CT+++++ ++    +  +
Sbjct: 226 PDSTSYKL--MVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMISTFSEKGFVNRAF 283

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
             +KK VQ+G+  N+  ++ LI+  CK   + +  ++L EM  K  + +++T+  LI   
Sbjct: 284 WYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDGL 343

Query: 246 CKKGMHYEALAVQDRMER-EGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPN 302
           CKKG   +A  +  ++ R +   P++ TY  +I+G+C+E ++  A  L   +K  G  PN
Sbjct: 344 CKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLVPN 403

Query: 303 HVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLN 362
             TYT LIDG+C+A +   A  L ++M  +G  P + TYN+I+  LCK+GR  +A +LL 
Sbjct: 404 TNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLR 463

Query: 363 EMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAK 422
              +  +  D VT   LI+ +C+  D   A+ + +RM + GL  D  TY  LI  FC+ K
Sbjct: 464 RGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLIATFCRQK 523

Query: 423 EMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYR 482
           +++ +++L    +  G  P+  +Y+ ++ GYC   +  + +K   +    G   D   Y 
Sbjct: 524 KVEESEKLFEEAVGLGLLPTKETYTSMICGYCRDGHISSAIKFFHKMRDYGCKPDSITYG 583

Query: 483 ALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRR 542
           ALI   C + K+D A +L+  M  NG+    V   +LAY Y + G+      IL+ + ++
Sbjct: 584 ALISGLCNESKLDEACQLYETMIDNGLSPCEVTRVTLAYEYCKQGDSATAMIILERLEKK 643

Query: 543 RLMITLK-IYRSFSASYAKDNEILDLFWSHVVDRGL 577
             + T+  + R   +   K   +  LF+  ++D+ L
Sbjct: 644 LWIRTVNTLIRKLCSE--KKVGVAALFFHKLLDKDL 677



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 108/392 (27%), Positives = 196/392 (50%), Gaps = 6/392 (1%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQL-GVVANIHLYNV 205
           +   ++ ++M      P+++  T L++ L K   T+  ++++ K+V+      N++ Y  
Sbjct: 315 KQAFEMLEEMVRKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTC 374

Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
           +I+  CK   +++ E LL  M+ + +  +  TY  LI  +CK G    A  + D M +EG
Sbjct: 375 MINGYCKEEKLNRAEMLLIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEG 434

Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEAL 323
            +P+I TYN++I G C++GR  EA +L R     G   + VTYT LI  +CR  D ++AL
Sbjct: 435 FTPNIFTYNAIIDGLCKKGRFPEAYKLLRRGLKSGLHADKVTYTILISEFCRQTDNKQAL 494

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
            +   M   G+ P + TYN ++   C++ ++ ++ +L  E     + P   T  ++I  Y
Sbjct: 495 AIFSRMFKVGLQPDMHTYNVLIATFCRQKKVEESEKLFEEAVGLGLLPTKETYTSMICGY 554

Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY 443
           C+ G  +SA+K  ++M + G   D  TY ALI G C   ++D A +L   M+D G SP  
Sbjct: 555 CRDGHISSAIKFFHKMRDYGCKPDSITYGALISGLCNESKLDEACQLYETMIDNGLSPCE 614

Query: 444 CSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNL 503
            +   L   YC + +    + +L+    +   + +     LIR+ C ++KV  A   F+ 
Sbjct: 615 VTRVTLAYEYCKQGDSATAMIILERLEKK---LWIRTVNTLIRKLCSEKKVGVAALFFHK 671

Query: 504 MQGNGILGDSVIYTSLAYAYWRAGEPKACSDI 535
           +    +  D +   +   A + + +    SD+
Sbjct: 672 LLDKDLNVDRITLAAFTTACYESNKFALVSDL 703



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 108/408 (26%), Positives = 203/408 (49%), Gaps = 3/408 (0%)

Query: 123 HDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTD 182
           +D+ D  + V+  +V  ++ +   ++ + +  +M+ H L+        +++        D
Sbjct: 151 NDNLDRATEVMQCMVRSFSEIGKLKEAVNMVIEMQNHGLVLKARILNFVIDVALALGFVD 210

Query: 183 MVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLI 242
              KV+ +M+   VV +   Y +++   C+   +  V++ L +M  +    D  T   +I
Sbjct: 211 YAEKVFDEMLDRAVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMI 270

Query: 243 ALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGAT 300
           + + +KG    A     +  + G++P+++ ++SLI+G C+ G +++A  +  ++  KG  
Sbjct: 271 STFSEKGFVNRAFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWK 330

Query: 301 PNHVTYTTLIDGYCRANDLEEALRL-REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
           PN  T+T LIDG C+    E+A RL  +++ +    P V TY  ++   CKE ++  A  
Sbjct: 331 PNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEM 390

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
           LL  M E+ + P+  T   LI+ +CK G+   A ++ + M + G   + FTY A+I G C
Sbjct: 391 LLIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLC 450

Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
           K      A +LL   L +G      +Y+ L+  +C + + +  L +       GL  D+ 
Sbjct: 451 KKGRFPEAYKLLRRGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMH 510

Query: 480 VYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
            Y  LI  FC+++KV+ +++LF    G G+L     YTS+   Y R G
Sbjct: 511 TYNVLIATFCRQKKVEESEKLFEEAVGLGLLPTKETYTSMICGYCRDG 558



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 104/427 (24%), Positives = 171/427 (40%), Gaps = 95/427 (22%)

Query: 26  WAKL-LNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTM 84
           W ++ LNPN+ +          L+N    C I S+  AF    E     +K ++ +H  +
Sbjct: 289 WVQMGLNPNLIN-------FSSLIN--GLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTAL 339

Query: 85  IHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLK 144
           I  L K       +   EK A R FL        LV+  D+   N +  + ++  Y   +
Sbjct: 340 IDGLCK-------KGWTEK-AFRLFLK-------LVR-SDNYKPNVYTYTCMINGYCKEE 383

Query: 145 MTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYN 204
                  +  +M+   L+P+ +  T L++   K       +++   M + G   NI  YN
Sbjct: 384 KLNRAEMLLIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYN 443

Query: 205 VLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMERE 264
            +I   CK     +  KLL       + AD  TY  LI+ +C++  + +ALA+  RM + 
Sbjct: 444 AIIDGLCKKGRFPEAYKLLRRGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKV 503

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRD----------------------------- 295
           G+ PD+ TYN LI  FCR+ ++ E+ +LF +                             
Sbjct: 504 GLQPDMHTYNVLIATFCRQKKVEESEKLFEEAVGLGLLPTKETYTSMICGYCRDGHISSA 563

Query: 296 IK--------GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVT------- 340
           IK        G  P+ +TY  LI G C  + L+EA +L E M   G+ P  VT       
Sbjct: 564 IKFFHKMRDYGCKPDSITYGALISGLCNESKLDEACQLYETMIDNGLSPCEVTRVTLAYE 623

Query: 341 -------------------------YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVT 375
                                     N+++RKLC E ++  A    +++ +K +  D +T
Sbjct: 624 YCKQGDSATAMIILERLEKKLWIRTVNTLIRKLCSEKKVGVAALFFHKLLDKDLNVDRIT 683

Query: 376 CNTLINA 382
                 A
Sbjct: 684 LAAFTTA 690



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/307 (24%), Positives = 144/307 (46%), Gaps = 5/307 (1%)

Query: 276 LIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKG 333
           ++  F   G+++EA  +  +++  G          +ID       ++ A ++ + M  + 
Sbjct: 164 MVRSFSEIGKLKEAVNMVIEMQNHGLVLKARILNFVIDVALALGFVDYAEKVFDEMLDRA 223

Query: 334 VYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAM 393
           V P   +Y  ++   C+ GRI D +R L +M E+  A DN TC  +I+ + + G    A 
Sbjct: 224 VVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMISTFSEKGFVNRAF 283

Query: 394 KVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGY 453
               + ++ GL  +   + +LI+G CK   +  A E+L  M+  G+ P+  +++ L+DG 
Sbjct: 284 WYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDGL 343

Query: 454 CNKNNEEALLKLLDEFV-SRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGD 512
           C K   E   +L  + V S     +V  Y  +I  +CK+EK++ A+ L   M+  G++ +
Sbjct: 344 CKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLVPN 403

Query: 513 SVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHV 572
           +  YT L   + +AG      +++D M +      +  Y +      K     + +   +
Sbjct: 404 TNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAY--KL 461

Query: 573 VDRGLMS 579
           + RGL S
Sbjct: 462 LRRGLKS 468


>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
 gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
          Length = 768

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 127/422 (30%), Positives = 200/422 (47%), Gaps = 5/422 (1%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           + ++M  + L P     T ++    +    D   ++ ++MV+ G        NVLI+  C
Sbjct: 225 MMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFC 284

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           K   +D+    + E   +  R D FTYNTL+   CK G    A+ V D M   G+ PDI 
Sbjct: 285 KQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIY 344

Query: 272 TYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           TYNSLI G C+ G + EA ++   +  +  +PN VTY  +I   C+ N ++EA  +  ++
Sbjct: 345 TYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLL 404

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
            +KG+ P V T+NS+++ LC     + A  L  EM  K   PD  T N LI++ C     
Sbjct: 405 TSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKL 464

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
             A+ +   M   G   +   Y  LI GFCK K ++ A+E+   M   G S    +Y+ L
Sbjct: 465 EEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTL 524

Query: 450 VDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGI 509
           +DG C     E   +L+D+ +  GL  D   Y +L+  FCK   +  A  +   M  +G 
Sbjct: 525 IDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGC 584

Query: 510 LGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDN---EILD 566
             D V Y +L     +AG  +  S +L  +  + +++T   Y     +  K N   E + 
Sbjct: 585 NPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMR 644

Query: 567 LF 568
           LF
Sbjct: 645 LF 646



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 135/503 (26%), Positives = 238/503 (47%), Gaps = 19/503 (3%)

Query: 64  FKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIH 123
           F WA S  PN+  S   +  ++  L K   F+  + +LE++ L    S       +  I 
Sbjct: 84  FNWA-SKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVLEEMKL----SGCEFDRGIFLIF 138

Query: 124 DDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDM 183
            +  G   +   +V     +K+ +D  ++    R +N         VLLN L       +
Sbjct: 139 VESYGKFELYDEVV---GIVKVMEDEYRIKPDTRFYN---------VLLNVLVDANKLKL 186

Query: 184 VWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIA 243
           V   +  MV+  +  ++  +N+LI A CK+  V     ++ EM    +  D  T+ T++ 
Sbjct: 187 VESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQ 246

Query: 244 LYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATP 301
            Y + G    AL ++++M   G     VT N LI+GFC++GR+ +A    ++   +G  P
Sbjct: 247 GYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRP 306

Query: 302 NHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLL 361
           +  TY TL++G C+    + A+ + + M   G+ P + TYNS++  LCK G I +A ++L
Sbjct: 307 DQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKIL 366

Query: 362 NEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKA 421
           ++M  +  +P+ VT N +I++ CK      A ++   +   G++ D  T+ +LI G C +
Sbjct: 367 DQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLS 426

Query: 422 KEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVY 481
                A +L   M   G  P   +Y+ L+D  C+    E  L LL E    G   +V +Y
Sbjct: 427 SNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIY 486

Query: 482 RALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
             LI  FCK ++++ A+ +F+ M+  G+  DSV Y +L     ++   +  + ++D M  
Sbjct: 487 NTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIM 546

Query: 542 RRLMITLKIYRSFSASYAKDNEI 564
             L      Y S    + K  +I
Sbjct: 547 EGLRPDKFTYNSLLTHFCKTGDI 569



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 113/369 (30%), Positives = 182/369 (49%), Gaps = 2/369 (0%)

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
           P       L+N L K        +V   M+  G+  +I+ YN LI   CK  ++++  K+
Sbjct: 306 PDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKI 365

Query: 223 LCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR 282
           L +M  +D   +  TYN +I+  CK+    EA  +   +  +GI PD+ T+NSLI G C 
Sbjct: 366 LDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCL 425

Query: 283 EGRMREARRLFRDIKGAT--PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVT 340
               + A  LF ++KG    P+  TY  LID  C +  LEEAL L + M   G    VV 
Sbjct: 426 SSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVI 485

Query: 341 YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML 400
           YN+++   CK  RI +A  + +EM  + ++ D+VT NTLI+  CK      A ++ ++M+
Sbjct: 486 YNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMI 545

Query: 401 EAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEE 460
             GL  D+FTY +L+  FCK  ++  A +++  M  +G +P   +Y+ L+ G C     +
Sbjct: 546 MEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQ 605

Query: 461 ALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLA 520
              +LL     +G+ +    Y  +I+   K+ +   A RLF  M       D++ Y  + 
Sbjct: 606 VASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVY 665

Query: 521 YAYWRAGEP 529
                 G P
Sbjct: 666 RGLCNGGGP 674



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 138/504 (27%), Positives = 223/504 (44%), Gaps = 26/504 (5%)

Query: 46  VLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIA 105
           VL+N +  C    +  A     E+    ++    ++ T+++ L K  H K A  +++ + 
Sbjct: 278 VLINGF--CKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAML 335

Query: 106 LRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHL 165
           L                  DPD   +  + L+     L   ++ +++ DQM   +  P+ 
Sbjct: 336 LGGL---------------DPD--IYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNA 378

Query: 166 HACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCE 225
                +++SL K+   D   ++ + +   G++ ++  +N LI   C SS+      L  E
Sbjct: 379 VTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEE 438

Query: 226 MEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGR 285
           M+ K  R D FTYN LI   C      EAL +   ME  G + ++V YN+LI GFC+  R
Sbjct: 439 MKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKR 498

Query: 286 MREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNS 343
           + EA  +F +  ++G + + VTY TLIDG C++  +E+A +L + M  +G+ P   TYNS
Sbjct: 499 IEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNS 558

Query: 344 ILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAG 403
           +L   CK G I+ A  ++  M      PD VT  TLI+  CK G    A ++   +   G
Sbjct: 559 LLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKG 618

Query: 404 LMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNE--EA 461
           ++L    Y  +I    K      A  L   MLD    P   +Y  +  G CN      EA
Sbjct: 619 MVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLCNGGGPIGEA 678

Query: 462 LLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAY 521
           +     E + RG   + S +  L    C     D   +L +++       +  I T   +
Sbjct: 679 V-DFTVEMIERGNIPEFSSFVMLAEGLCTLSMDDTLVKLVDMIMEKAKFSEREISTIRGF 737

Query: 522 AYWRAGEP--KACSDILDDMYRRR 543
              R  +        ILDDMY RR
Sbjct: 738 LKIRKFQDALSTLGGILDDMYPRR 761


>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 533

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 109/355 (30%), Positives = 188/355 (52%), Gaps = 2/355 (0%)

Query: 149 GLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIH 208
           GL+ F +M  +  +P++     +++   K + TD  +   + M   G+  N+  +N++I+
Sbjct: 2   GLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIIN 61

Query: 209 ACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISP 268
             C+   + +  ++L EM  K    D  TYNTL+  YCK+G  ++AL +   M R G+SP
Sbjct: 62  GLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSP 121

Query: 269 DIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEALRLR 326
           ++VTY SLI+  C+ G +  A   F    ++G  PN  TYTT+I+G+ +   L+EA R+ 
Sbjct: 122 NVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVL 181

Query: 327 EVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKI 386
             M   G  P +VTYN+++   C  GR+ +A  LL +M  K + PD V+ +T+I+ + + 
Sbjct: 182 NEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARN 241

Query: 387 GDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSY 446
            +   A ++K  M+   ++ D  TY +LI G C+ + +  A ++   ML     P   +Y
Sbjct: 242 QELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTY 301

Query: 447 SWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
           + L++ YC + +    L L DE + +G   D   Y  LI    K+ +   A+RL 
Sbjct: 302 TTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLL 356



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 116/379 (30%), Positives = 193/379 (50%), Gaps = 22/379 (5%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           +V  +M     +P       L+N   K+        ++ +MV+ G+  N+  Y  LI++ 
Sbjct: 74  EVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSM 133

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           CK+ ++++  +   +M  + +  +  TY T+I  + ++G+  EA  V + M R G  P I
Sbjct: 134 CKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSI 193

Query: 271 VTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
           VTYN+LI+G C  GRM EA  L +D+  KG  P+ V+Y+T+I G+ R  +L+ A +++  
Sbjct: 194 VTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVE 253

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M  K V P  VTY+S+++ LC++ R+ +A  +  EM   K+ PD  T  TLINAYCK GD
Sbjct: 254 MIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGD 313

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
              A+ + + M++ G + D  TY  LI+G  K      A+ LL  +      PS  +Y+ 
Sbjct: 314 LNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNT 373

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG 508
           L++  CN   + A+                    AL++ FC K  +D A ++F  M    
Sbjct: 374 LIENCCNIEFKSAV--------------------ALVKGFCMKGLMDEADQVFESMINKN 413

Query: 509 ILGDSVIYTSLAYAYWRAG 527
              +  IY  + + + R G
Sbjct: 414 HKPNEAIYNVIIHGHCRIG 432



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 110/360 (30%), Positives = 179/360 (49%), Gaps = 2/360 (0%)

Query: 183 MVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLI 242
           M  + +K+M + G + N+  YN +I   CK    D+    L  M  K +  +L T+N +I
Sbjct: 1   MGLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMII 60

Query: 243 ALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGAT 300
              C+ G   E   V   M R+G  PD VTYN+L++G+C+EG   +A  L  ++   G +
Sbjct: 61  NGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLS 120

Query: 301 PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRL 360
           PN VTYT+LI+  C+A +L  A+   + M  +G+ P   TY +I+    ++G + +A R+
Sbjct: 121 PNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRV 180

Query: 361 LNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCK 420
           LNEM      P  VT N LIN +C +G    A+ +   M+  G++ D  +Y  +I GF +
Sbjct: 181 LNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFAR 240

Query: 421 AKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSV 480
            +E+D A ++   M+     P   +YS L+ G C +        +  E ++  L  D   
Sbjct: 241 NQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFT 300

Query: 481 YRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMY 540
           Y  LI  +CK+  ++ A  L + M   G L D+V Y  L     +    K    +L  ++
Sbjct: 301 YTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLF 360



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 99/323 (30%), Positives = 167/323 (51%), Gaps = 2/323 (0%)

Query: 225 EMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREG 284
           EME      ++ TYNT+I  YCK     EA      M  +G+ P+++T+N +I+G CR+G
Sbjct: 8   EMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDG 67

Query: 285 RMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYN 342
           R++E   +  ++  KG  P+ VTY TL++GYC+  +  +AL L   M   G+ P VVTY 
Sbjct: 68  RLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYT 127

Query: 343 SILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEA 402
           S++  +CK G +  A    ++M+ + + P+  T  T+IN + + G    A +V N M  +
Sbjct: 128 SLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRS 187

Query: 403 GLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEAL 462
           G +    TY ALI+G C    M+ A  LL  M+  G  P   SYS ++ G+      +  
Sbjct: 188 GFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRA 247

Query: 463 LKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYA 522
            ++  E + + +  D   Y +LI+  C++ ++  A  +F  M    +  D   YT+L  A
Sbjct: 248 FQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINA 307

Query: 523 YWRAGEPKACSDILDDMYRRRLM 545
           Y + G+      + D+M ++  +
Sbjct: 308 YCKEGDLNKALHLHDEMIQKGFL 330



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 100/307 (32%), Positives = 161/307 (52%), Gaps = 2/307 (0%)

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRAN 317
            MER G  P++VTYN++I G+C+  R  EA    R   +KG  PN +T+  +I+G CR  
Sbjct: 8   EMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDG 67

Query: 318 DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCN 377
            L+E   +   M+ KG  P  VTYN+++   CKEG    A  L  EM    ++P+ VT  
Sbjct: 68  RLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYT 127

Query: 378 TLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA 437
           +LIN+ CK G+   AM+  ++M   GL  ++ TY  +I+GF +   +D A  +L  M  +
Sbjct: 128 SLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRS 187

Query: 438 GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYA 497
           GF PS  +Y+ L++G+C     E  + LL + V +G+  DV  Y  +I  F + +++D A
Sbjct: 188 GFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRA 247

Query: 498 QRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSAS 557
            ++   M G  +L D+V Y+SL              D+  +M   +L      Y +   +
Sbjct: 248 FQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINA 307

Query: 558 YAKDNEI 564
           Y K+ ++
Sbjct: 308 YCKEGDL 314



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 98/381 (25%), Positives = 168/381 (44%), Gaps = 34/381 (8%)

Query: 79  QSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVI 138
           +++ T+I+   +      A  +L ++    F+ +    NAL+        N H +     
Sbjct: 159 RTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALI--------NGHCV----- 205

Query: 139 FYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVA 198
               L   ++ + +   M    ++P + + + +++  A+++  D  +++  +M+   V+ 
Sbjct: 206 ----LGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLP 261

Query: 199 NIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQ 258
           +   Y+ LI   C+   + +   +  EM    +  D FTY TLI  YCK+G   +AL + 
Sbjct: 262 DAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLH 321

Query: 259 DRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLID----- 311
           D M ++G  PD VTYN LI+G  ++ R +EARRL   +    + P+ VTY TLI+     
Sbjct: 322 DEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENCCNI 381

Query: 312 ----------GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLL 361
                     G+C    ++EA ++ E M  K   P    YN I+   C+ G +  A +L 
Sbjct: 382 EFKSAVALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYKLY 441

Query: 362 NEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKA 421
            EM      P  VT   L+ A    G      +V   +L +  + D    K L+    K 
Sbjct: 442 KEMVHVDFVPHTVTVLALVKALFTEGMDGELNEVIGDILRSCKLTDAELSKVLVEINQKE 501

Query: 422 KEMDIAKELLFGMLDAGFSPS 442
             MD+   LL  M   G  PS
Sbjct: 502 GNMDMVFNLLTEMAKDGLIPS 522



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 117/251 (46%)

Query: 322 ALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
            LR  + M   G  P VVTYN+++   CK  R  +A   L  M  K + P+ +T N +IN
Sbjct: 2   GLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIIN 61

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
             C+ G      +V   M   G + D+ TY  L++G+CK      A  L   M+  G SP
Sbjct: 62  GLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSP 121

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
           +  +Y+ L++  C   N    ++  D+   RGLC +   Y  +I  F ++  +D A R+ 
Sbjct: 122 NVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVL 181

Query: 502 NLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKD 561
           N M  +G +   V Y +L   +   G  +    +L DM  + ++  +  Y +  + +A++
Sbjct: 182 NEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARN 241

Query: 562 NEILDLFWSHV 572
            E+   F   V
Sbjct: 242 QELDRAFQMKV 252


>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
 gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
          Length = 616

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 121/396 (30%), Positives = 199/396 (50%), Gaps = 2/396 (0%)

Query: 149 GLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIH 208
            +++FD M      P +H  T ++N L K   T     +++KM + G   ++  Y+ +I 
Sbjct: 211 AVELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIID 270

Query: 209 ACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISP 268
           + CK   V++   +   M+ K +  ++FTYN+LI   C      EA A+ + M    I P
Sbjct: 271 SLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMP 330

Query: 269 DIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLR 326
           +IVT++ LI+ FC+EG + EAR + + +   G  PN VTY++L++GY    ++ EA +L 
Sbjct: 331 NIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLF 390

Query: 327 EVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKI 386
           +VM  KG  P V +YN ++   CK  RI +A +L NEM  + + PD V+ NTLI+  C++
Sbjct: 391 DVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQL 450

Query: 387 GDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSY 446
           G    A  +   ML  G + D  TY  L+ GFCK   +  A  L   M      P+   Y
Sbjct: 451 GRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMY 510

Query: 447 SWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQG 506
           + L+D  C   N +   KL  E   +GL  +V +Y  +I   CK+  +D A   F  M+ 
Sbjct: 511 NILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEE 570

Query: 507 NGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRR 542
           +G   +   Y  +   + +  +      ++ +M  +
Sbjct: 571 DGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMREK 606



 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 123/419 (29%), Positives = 208/419 (49%), Gaps = 5/419 (1%)

Query: 155 QMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSS 214
           QM +  L P  +   +L+N   + +  D+ + V  K+++LG+   I  +N LI+  CK  
Sbjct: 147 QMELAGLSPDTYTLHMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVG 206

Query: 215 DVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYN 274
              +  +L  +M  +  + D+ TY T+I   CK G    A  +  +M   G  PD+VTY+
Sbjct: 207 KFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYS 266

Query: 275 SLIHGFCREGRMREARRLFR--DIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAK 332
           ++I   C++ R+ EA  +F     KG +PN  TY +LI G C  +   EA  +   M + 
Sbjct: 267 TIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSL 326

Query: 333 GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
            + P +VT++ ++   CKEG + +A  +L  M E  + P+ VT ++L+N Y    +   A
Sbjct: 327 NIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEA 386

Query: 393 MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
            K+ + M+  G   D F+Y  LI+G+CKAK +  AK+L   M+  G +P   SY+ L+DG
Sbjct: 387 RKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDG 446

Query: 453 YCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGD 512
            C          L    ++ G   D+  Y  L+  FCK+  +  A RLF  MQ   +  +
Sbjct: 447 LCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPN 506

Query: 513 SVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKD---NEILDLF 568
            V+Y  L  A  ++   K    +  +++ + L   ++IY +      K+   +E L+ F
Sbjct: 507 MVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAF 565



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 129/428 (30%), Positives = 212/428 (49%), Gaps = 18/428 (4%)

Query: 141 ANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDR-LTDMVWKVYKKMVQLGVVAN 199
           ++ +   D L  F+ M      P +     LL+++ K R   D V  + K+M   G+  +
Sbjct: 97  SSFRNIDDALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPD 156

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
            +  ++LI+   +   VD    +L ++    ++  + T+NTLI   CK G   +A+ + D
Sbjct: 157 TYTLHMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFD 216

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRAN 317
            M   G  PD+ TY ++I+G C+ G    A  LFR +   G  P+ VTY+T+ID  C+  
Sbjct: 217 DMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDR 276

Query: 318 DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCN 377
            + EAL +   M AKG+ P + TYNS+++ LC   R R+A+ +LNEM    I P+ VT +
Sbjct: 277 RVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFS 336

Query: 378 TLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA 437
            LIN +CK G+   A  V   M E G+  +  TY +L++G+    E+  A++L   M+  
Sbjct: 337 LLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITK 396

Query: 438 GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYA 497
           G  P   SY+ L++GYC         +L +E + +GL  D+  Y  LI   C+  ++  A
Sbjct: 397 GCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREA 456

Query: 498 QRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSAS 557
             LF  M  NG L D   Y+ L   + + G                L    +++R+  ++
Sbjct: 457 HDLFKNMLTNGNLPDLCTYSILLDGFCKQG---------------YLAKAFRLFRAMQST 501

Query: 558 YAKDNEIL 565
           Y K N ++
Sbjct: 502 YLKPNMVM 509



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 131/456 (28%), Positives = 211/456 (46%), Gaps = 23/456 (5%)

Query: 126 PDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVW 185
           PD  ++ L  L+  +  L+    G  V  ++    L   +     L+N L K        
Sbjct: 155 PD--TYTLHMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAV 212

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
           +++  MV  G   ++H Y  +I+  CK  +      L  +M     + D+ TY+T+I   
Sbjct: 213 ELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSL 272

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGAT--PNH 303
           CK     EAL +   M+ +GISP+I TYNSLI G C   R REA  +  ++      PN 
Sbjct: 273 CKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNI 332

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
           VT++ LI+ +C+  ++ EA  + + M   GV P VVTY+S++     +  + +A +L + 
Sbjct: 333 VTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDV 392

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
           M  K   PD  + N LIN YCK      A ++ N M+  GL  D  +Y  LI G C+   
Sbjct: 393 MITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGR 452

Query: 424 MDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRA 483
           +  A +L   ML  G  P  C+YS L+DG+C +       +L     S  L  ++ +Y  
Sbjct: 453 LREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNI 512

Query: 484 LIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRR 543
           LI   CK   +  A++LF+ +   G+  +  IYT++     + G       +LD+     
Sbjct: 513 LIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEG-------LLDE----- 560

Query: 544 LMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMS 579
               L+ +R+        NE    F  +V+ RG + 
Sbjct: 561 ---ALEAFRNMEEDGCPPNE----FSYNVIIRGFLQ 589



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 119/437 (27%), Positives = 208/437 (47%), Gaps = 29/437 (6%)

Query: 83  TMIHILTKNKHFKSAQNMLEKIALR----DFLSTPSVLNALVKIHDDPDGNSHVLSWLVI 138
           T+I+ L K   F  A  + + +  R    D  +  +++N L KI +              
Sbjct: 197 TLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGE-------------- 242

Query: 139 FYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVA 198
                  T     +F +M      P +   + +++SL KDR  +    ++  M   G+  
Sbjct: 243 -------TVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISP 295

Query: 199 NIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQ 258
           NI  YN LI   C  S   +   +L EM   ++  ++ T++ LI ++CK+G  +EA  V 
Sbjct: 296 NIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVL 355

Query: 259 DRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI---KGATPNHVTYTTLIDGYCR 315
             M   G+ P++VTY+SL++G+  +  + EAR+LF D+   KG  P+  +Y  LI+GYC+
Sbjct: 356 KTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLF-DVMITKGCKPDVFSYNILINGYCK 414

Query: 316 ANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVT 375
           A  + EA +L   M  +G+ P +V+YN+++  LC+ GR+R+A+ L   M      PD  T
Sbjct: 415 AKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCT 474

Query: 376 CNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGML 435
            + L++ +CK G  A A ++   M    L  +   Y  LI   CK++ +  A++L   + 
Sbjct: 475 YSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELF 534

Query: 436 DAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVD 495
             G  P+   Y+ +++G C +   +  L+        G   +   Y  +IR F + +   
Sbjct: 535 VQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGFLQHKDES 594

Query: 496 YAQRLFNLMQGNGILGD 512
            A +L   M+  G + D
Sbjct: 595 RAVQLIGEMREKGFVAD 611



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 101/409 (24%), Positives = 184/409 (44%), Gaps = 55/409 (13%)

Query: 54  CHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIA----LRDF 109
           C +     A   + +     Y+  + ++ T+I+ L K     +A  +  K+       D 
Sbjct: 203 CKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDV 262

Query: 110 LSTPSVLNALVK---IHDDPD-----------GNSHVLSWLVIFYANLKMTQDGLQVFDQ 155
           ++  +++++L K   +++  D            N    + L+    N    ++   + ++
Sbjct: 263 VTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNE 322

Query: 156 MRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSD 215
           M   N+MP++   ++L+N   K+        V K M ++GV  N+  Y+ L++     ++
Sbjct: 323 MMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAE 382

Query: 216 VDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNS 275
           V +  KL   M  K  + D+F+YN LI  YCK     EA  + + M  +G++PDIV+YN+
Sbjct: 383 VVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNT 442

Query: 276 LIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAA-- 331
           LI G C+ GR+REA  LF+++   G  P+  TY+ L+DG+C+   L +A RL   M +  
Sbjct: 443 LIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTY 502

Query: 332 ---------------------------------KGVYPGVVTYNSILRKLCKEGRIRDAN 358
                                            +G+ P V  Y +I+  LCKEG + +A 
Sbjct: 503 LKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEAL 562

Query: 359 RLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLD 407
                M E    P+  + N +I  + +  D + A+++   M E G + D
Sbjct: 563 EAFRNMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMREKGFVAD 611



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 59/250 (23%), Positives = 109/250 (43%), Gaps = 1/250 (0%)

Query: 318 DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDAN-RLLNEMNEKKIAPDNVTC 376
           ++++AL     M  +   P ++ +N +L  + K     DA   L  +M    ++PD  T 
Sbjct: 101 NIDDALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTL 160

Query: 377 NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD 436
           + LIN + ++        V  ++++ GL L   T+  LI+G CK  +   A EL   M+ 
Sbjct: 161 HMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVA 220

Query: 437 AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDY 496
            G+ P   +Y+ +++G C      A   L  +    G   DV  Y  +I   CK  +V+ 
Sbjct: 221 RGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNE 280

Query: 497 AQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSA 556
           A  +F+ M+  GI  +   Y SL          +  S +L++M    +M  +  +     
Sbjct: 281 ALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLIN 340

Query: 557 SYAKDNEILD 566
            + K+  + +
Sbjct: 341 IFCKEGNVFE 350


>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
           and contains a RepB PF|01051 protein and multiple PPR
           PF|01535 repeats [Arabidopsis thaliana]
          Length = 613

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 115/396 (29%), Positives = 208/396 (52%), Gaps = 2/396 (0%)

Query: 146 TQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNV 205
             + + + D+M      P L     ++N L K    D+   + KKM +  + A++ +Y  
Sbjct: 185 ASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTT 244

Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
           +I A C   +V+    L  EM+ K +R ++ TYN+LI   C  G   +A  +   M    
Sbjct: 245 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK 304

Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEAL 323
           I+P++VT+++LI  F +EG++ EA +L+ ++  +   P+  TY++LI+G+C  + L+EA 
Sbjct: 305 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 364

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
            + E+M +K  +P VVTYN++++  CK  R+ +   L  EM+++ +  + VT NTLI   
Sbjct: 365 HMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGL 424

Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY 443
            + GD   A K+  +M+  G+  D  TY  L+ G CK  +++ A  +   +  +   P  
Sbjct: 425 FQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDI 484

Query: 444 CSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNL 503
            +Y+ +++G C     E    L      +G+  +V +Y  +I  FC+K   + A  LF  
Sbjct: 485 YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFRE 544

Query: 504 MQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
           M+ +G L +S  Y +L  A  R G+  A ++++ +M
Sbjct: 545 MKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEM 580



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 123/416 (29%), Positives = 201/416 (48%), Gaps = 4/416 (0%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           +VL  ++K+  +PD     LS L+  Y + K   + + + DQM V    P+      L++
Sbjct: 120 AVLGKMMKLGYEPD--IVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIH 177

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
            L           +  +MV  G   ++  Y  +++  CK  D+D    LL +ME   + A
Sbjct: 178 GLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEA 237

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           D+  Y T+I   C      +AL +   M+ +GI P++VTYNSLI   C  GR  +A RL 
Sbjct: 238 DVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLL 297

Query: 294 RDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
            D+  +   PN VT++ LID + +   L EA +L + M  + + P + TY+S++   C  
Sbjct: 298 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 357

Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
            R+ +A  +   M  K   P+ VT NTLI  +CK       M++   M + GL+ +  TY
Sbjct: 358 DRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTY 417

Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
             LI G  +A + D+A+++   M+  G  P   +YS L+DG C     E  L + +    
Sbjct: 418 NTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQK 477

Query: 472 RGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
             +  D+  Y  +I   CK  KV+    LF  +   G+  + +IYT++   + R G
Sbjct: 478 SKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKG 533



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 116/366 (31%), Positives = 192/366 (52%), Gaps = 2/366 (0%)

Query: 165 LHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLC 224
           L++  +L+N   +     +   V  KM++LG   +I   + L++  C    + +   L+ 
Sbjct: 99  LYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVD 158

Query: 225 EMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREG 284
           +M   + + +  T+NTLI          EA+A+ DRM   G  PD+ TY ++++G C+ G
Sbjct: 159 QMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRG 218

Query: 285 RMREARRLFRDIKGA--TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYN 342
            +  A  L + ++      + V YTT+ID  C   ++ +AL L   M  KG+ P VVTYN
Sbjct: 219 DIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYN 278

Query: 343 SILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEA 402
           S++R LC  GR  DA+RLL++M E+KI P+ VT + LI+A+ K G    A K+ + M++ 
Sbjct: 279 SLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 338

Query: 403 GLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEAL 462
            +  D FTY +LI+GFC    +D AK +   M+     P+  +Y+ L+ G+C     E  
Sbjct: 339 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEG 398

Query: 463 LKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYA 522
           ++L  E   RGL  +   Y  LI+   +    D AQ++F  M  +G+  D + Y+ L   
Sbjct: 399 MELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDG 458

Query: 523 YWRAGE 528
             + G+
Sbjct: 459 LCKYGK 464



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 127/416 (30%), Positives = 202/416 (48%), Gaps = 15/416 (3%)

Query: 173 NSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVR 232
           N L   +L D V  ++ +MVQ   + +I  +N L+ A  K +  D V  L   M+   + 
Sbjct: 38  NVLLDLKLDDAV-DLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRIS 96

Query: 233 ADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRL 292
            DL++YN LI  +C++     ALAV  +M + G  PDIVT +SL++G+C   R+ EA  L
Sbjct: 97  YDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVAL 156

Query: 293 FRD--IKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
                +    PN VT+ TLI G    N   EA+ L + M A+G  P + TY +++  LCK
Sbjct: 157 VDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCK 216

Query: 351 EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
            G I  A  LL +M + KI  D V   T+I+A C   +   A+ +   M   G+  +  T
Sbjct: 217 RGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVT 276

Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFV 470
           Y +LI   C       A  LL  M++   +P+  ++S L+D +  +       KL DE +
Sbjct: 277 YNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 336

Query: 471 SRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPK 530
            R +  D+  Y +LI  FC  +++D A+ +F LM       + V Y +L   + +A   +
Sbjct: 337 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVE 396

Query: 531 ACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKEM 586
              ++  +M +R L+     Y +          I  LF +   D   M++ IFK+M
Sbjct: 397 EGMELFREMSQRGLVGNTVTYNTL---------IQGLFQAGDCD---MAQKIFKKM 440



 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 114/476 (23%), Positives = 208/476 (43%), Gaps = 59/476 (12%)

Query: 47  LLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIAL 106
           LLN Y  CH   +S A     +  V  Y+ +  +  T+IH L  +     A  +++++  
Sbjct: 140 LLNGY--CHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVA 197

Query: 107 R----DFLSTPSVLNALVKIHD--------------DPDGNSHVLSWLVIFYANLKMTQD 148
           R    D  +  +V+N L K  D                + +  + + ++    N K   D
Sbjct: 198 RGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVND 257

Query: 149 GLQVFDQMRVHNLMPHLHACTVLLNSLAK-DRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
            L +F +M    + P++     L+  L    R +D   ++   M++  +  N+  ++ LI
Sbjct: 258 ALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSD-ASRLLSDMIERKINPNVVTFSALI 316

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
            A  K   + + EKL  EM  + +  D+FTY++LI  +C      EA  + + M  +   
Sbjct: 317 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 376

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDIK------------------------------ 297
           P++VTYN+LI GFC+  R+ E   LFR++                               
Sbjct: 377 PNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKI 436

Query: 298 -------GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
                  G  P+ +TY+ L+DG C+   LE+AL + E +    + P + TYN ++  +CK
Sbjct: 437 FKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCK 496

Query: 351 EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
            G++ D   L   ++ K + P+ +   T+I+ +C+ G    A  +   M E G + +  T
Sbjct: 497 AGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGT 556

Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLL 466
           Y  LI    +  +   + EL+  M   GF     + S +++   +   E++ L++L
Sbjct: 557 YNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSYLEML 612



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 74/323 (22%), Positives = 142/323 (43%), Gaps = 11/323 (3%)

Query: 244 LYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGATPNH 303
           L+  +G+++ A +      RE +S +++    L       G M ++R L        P+ 
Sbjct: 16  LFSLRGVYFSAASYD---YREKLSRNVLLDLKLDDAVDLFGEMVQSRPL--------PSI 64

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
           V +  L+    + N  +  + L E M    +   + +YN ++   C+  ++  A  +L +
Sbjct: 65  VEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGK 124

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
           M +    PD VT ++L+N YC     + A+ + ++M       +  T+  LIHG     +
Sbjct: 125 MMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNK 184

Query: 424 MDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRA 483
              A  L+  M+  G  P   +Y  +V+G C + + +  L LL +     +  DV +Y  
Sbjct: 185 ASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTT 244

Query: 484 LIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRR 543
           +I   C  + V+ A  LF  M   GI  + V Y SL       G     S +L DM  R+
Sbjct: 245 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK 304

Query: 544 LMITLKIYRSFSASYAKDNEILD 566
           +   +  + +   ++ K+ ++++
Sbjct: 305 INPNVVTFSALIDAFVKEGKLVE 327


>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 130/488 (26%), Positives = 236/488 (48%), Gaps = 24/488 (4%)

Query: 80  SHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSV---------------LNALVKIHD 124
           S+  +I+ L +    K A  +L ++  R   STP V               L   +K+ D
Sbjct: 260 SYNIIIYSLCRLGKVKEAHRLLMQMDFRS--STPDVVSYSTVIDGYCHLGELKKALKLMD 317

Query: 125 DPD-----GNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDR 179
           D        N +  + +++    +  + +  +V  +M    ++P     T L++   K  
Sbjct: 318 DMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLG 377

Query: 180 LTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYN 239
                 K + +M+   +  +   Y  LI    +   V + + L  EM  + ++ D  TY 
Sbjct: 378 HVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYT 437

Query: 240 TLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--K 297
           TLI +YCK G    A ++ + M + G++P+IVTY +LI G C+ G +  A  L  ++  K
Sbjct: 438 TLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKK 497

Query: 298 GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDA 357
           G   N   Y ++++G C+A ++E+A++L + M   G+ P  +TY +++   C+ G I  A
Sbjct: 498 GLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKA 557

Query: 358 NRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHG 417
           ++LL EM ++ + P  VT N L+N +C +G      ++   MLE G++ D  TY  L+  
Sbjct: 558 HKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQ 617

Query: 418 FCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVD 477
            C    M+   ++   M + G +P   +Y+ L+ G+C   N +    L  E + +G    
Sbjct: 618 HCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPT 677

Query: 478 VSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILD 537
           V+ Y ALI+RF KK+K+  A+ LF  M+G+G++ D  IY       +  G+ +   ++ D
Sbjct: 678 VTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCD 737

Query: 538 DMYRRRLM 545
           +   + L+
Sbjct: 738 EAIEKCLL 745



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 140/520 (26%), Positives = 251/520 (48%), Gaps = 30/520 (5%)

Query: 86  HILTKNKHFKSAQNMLEKIALRDFLSTPSVLNA-LVKIHDDPDG-------------NSH 131
            +L +  H   A+ +L+K+     + T    NA L +I ++ +G             + +
Sbjct: 198 QVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAIKVFCEYGISWN 257

Query: 132 VLSWLVIFYA--NLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYK 189
             S+ +I Y+   L   ++  ++  QM   +  P + + + +++            K+  
Sbjct: 258 TTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMD 317

Query: 190 KMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKG 249
            M   G+  N + YN +I   CK     + EK+L EM  + +  D   Y TLI  + K G
Sbjct: 318 DMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLG 377

Query: 250 MHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYT 307
               A    D M  + ISPD +TY +LI GF + G++ E + LF ++  +G  P+ VTYT
Sbjct: 378 HVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYT 437

Query: 308 TLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEK 367
           TLID YC+A ++  A  L   M   G+ P +VTY +++  LCK G +  AN LL+EM +K
Sbjct: 438 TLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKK 497

Query: 368 KIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIA 427
            +  +    N+++N  CK G+   A+K+   M  AG+  D  TY  +I  +C+  ++D A
Sbjct: 498 GLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKA 557

Query: 428 KELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRR 487
            +LL  MLD G  P+  +++ L++G+C     E   +LL   + +G+  D   Y  L+++
Sbjct: 558 HKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQ 617

Query: 488 FCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMIT 547
            C +  ++   +++  M+  G+  DS  Y  L   + +A   K    +  +M  +  + T
Sbjct: 618 HCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPT 677

Query: 548 LKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKEMQ 587
           +  Y +    + K  +IL+            ++ +F+EM+
Sbjct: 678 VTSYNALIKRFYKKKKILE------------ARELFEEMR 705



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 70/314 (22%), Positives = 130/314 (41%), Gaps = 11/314 (3%)

Query: 266 ISPDIVTYNSLIHGFCREGRM-------REARRLFRDIKGATPNHVTYTTLIDGYCRAND 318
           +S D+   + L+H +    ++       +   RL    K   PN + +            
Sbjct: 146 VSNDLRLAHELVHDYFLNSKLEIGVKMTQFTHRLIYTYKYWGPNPIAFDIFFQVLVEIGH 205

Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGR-IRDANRLLNEMNEKKIAPDNVTCN 377
           L EA +L + + + G+   V + N+ L ++      I  A ++  E     I+ +  + N
Sbjct: 206 LSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAIKVFCEYG---ISWNTTSYN 262

Query: 378 TLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA 437
            +I + C++G    A ++  +M       D  +Y  +I G+C   E+  A +L+  M   
Sbjct: 263 IIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIK 322

Query: 438 GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYA 497
           G  P+  +Y+ ++   C         K+L E +S+ +  D  VY  LI  F K   V  A
Sbjct: 323 GLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTA 382

Query: 498 QRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSAS 557
            + F+ M    I  D + YT+L   + + G+     ++  +M  R L      Y +    
Sbjct: 383 NKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDV 442

Query: 558 YAKDNEILDLFWSH 571
           Y K  E+++ F  H
Sbjct: 443 YCKAGEMVNAFSLH 456


>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 499

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 145/492 (29%), Positives = 232/492 (47%), Gaps = 32/492 (6%)

Query: 63  FFKWAES---AVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNAL 119
           FFKW  +    VP    S+++  T++ +L   + F  A+ +L ++    ++  P +   L
Sbjct: 5   FFKWVRTQRGGVP----SVRACTTLVEMLGIARRFNEAEEVLAEVEKSRYILQPRIFIEL 60

Query: 120 VKIHDDP-------------DGNSHVLSW-----LVIFYANLKMTQDGLQVFDQMRVHNL 161
            + +                +G+   L+      L+  +     TQ  L V+  M    L
Sbjct: 61  ARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGL 120

Query: 162 MPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEK 221
            P  +   VL+N+  K +  D VWK++++M       N+  Y++LI A CK   V+K  K
Sbjct: 121 RPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALK 180

Query: 222 LLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFC 281
           +  +M+ +  R ++FTY ++I    K G   +A  + + M  EG+    V YNSLIHG  
Sbjct: 181 VFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLG 240

Query: 282 REGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVV 339
           R GR   A +LFR++  KG  P+HVT+T+L+ G   A    EA R+ +     G    V 
Sbjct: 241 RSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVN 300

Query: 340 TYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRM 399
            YN ++  LCK  R+ +A  +  E+ E  + PD  T N L++  CK G    A  +   M
Sbjct: 301 LYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDM 360

Query: 400 LEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNE 459
             AG   D   Y  LI G  K+  ++ A +LL  M   G+ P   +Y+ L+D  C     
Sbjct: 361 KRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRI 420

Query: 460 EALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILG----DSVI 515
           E  L+L +E  ++G    V+ Y  ++   C   +VD A +LFN M+   + G    D V 
Sbjct: 421 EDALRLFEEISAKGFANTVT-YNTILNGLCMAGRVDEAYKLFNGMKQETVDGVIDPDFVT 479

Query: 516 YTSLAYAYWRAG 527
           YT+L     +AG
Sbjct: 480 YTTLLNGARQAG 491



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 100/380 (26%), Positives = 174/380 (45%), Gaps = 2/380 (0%)

Query: 162 MPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEK 221
           +P + ACT L+  L   R  +   +V  ++ +   +    ++  L      +  ++K  +
Sbjct: 16  VPSVRACTTLVEMLGIARRFNEAEEVLAEVEKSRYILQPRIFIELARGYASAGLLEKSVE 75

Query: 222 LLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFC 281
            L  ME          YN+LI  + K G   +ALAV   M + G+ PD  T+N L++ F 
Sbjct: 76  ALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFK 135

Query: 282 REGRMREARRLFRDIKGA--TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVV 339
           +  R+    +LF +++    +PN +TY+ LID  C+   +E+AL++   M ++G  P + 
Sbjct: 136 KAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIF 195

Query: 340 TYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRM 399
           TY S++  L K G +  A  L  EM  + +    V  N+LI+   + G   +A K+   M
Sbjct: 196 TYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREM 255

Query: 400 LEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNE 459
           L  GL  D  T+ +L++G   A     A+ +     D G +     Y+ L+D  C     
Sbjct: 256 LSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRL 315

Query: 460 EALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
           +   ++  E    GL  DV  + AL+   CK  ++  A  L   M+  G   D  +Y +L
Sbjct: 316 DEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTL 375

Query: 520 AYAYWRAGEPKACSDILDDM 539
                ++G  +    +L +M
Sbjct: 376 IDGLRKSGRVEEAGQLLLEM 395



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 77/322 (23%), Positives = 146/322 (45%), Gaps = 2/322 (0%)

Query: 245 YCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPN 302
           Y   G+  +++    RME    +     YNSLI  F + G  ++A  ++R +   G  P+
Sbjct: 64  YASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPD 123

Query: 303 HVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLN 362
             T+  L++ + +A  ++   +L E M  +   P V+TY+ ++  +CK G +  A ++  
Sbjct: 124 TYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFL 183

Query: 363 EMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAK 422
           +M  +   P+  T  ++I+   K G    A  +   M   GL+  +  Y +LIHG  ++ 
Sbjct: 184 DMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSG 243

Query: 423 EMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYR 482
             D A +L   ML  G  P + +++ LV G           ++  E    G  +DV++Y 
Sbjct: 244 RADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYN 303

Query: 483 ALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRR 542
            LI   CK +++D A  +F  ++ +G++ D   + +L     ++G       +L DM R 
Sbjct: 304 VLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRA 363

Query: 543 RLMITLKIYRSFSASYAKDNEI 564
                + +Y +      K   +
Sbjct: 364 GCTPDVTVYNTLIDGLRKSGRV 385


>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
 gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
          Length = 707

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 134/455 (29%), Positives = 217/455 (47%), Gaps = 38/455 (8%)

Query: 144 KMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG-------- 195
           KM     +++D MR    +P      +++ SL + +  D V  ++K+MV LG        
Sbjct: 10  KMHSQVSELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLGFRPDKLVY 69

Query: 196 ---------------------------VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEF 228
                                      VV N+ +YNVLI   CK   +   EKL  EM  
Sbjct: 70  GRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSV 129

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
           +++  +  T+NTLI  YCK G    A+ +++RM++E + P I+T+NSL+ G C+  R+ E
Sbjct: 130 RNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEE 189

Query: 289 ARRLFRDIK--GATPNHVTYTTLIDGYCRAND-LEEALRLREVMAAKGVYPGVVTYNSIL 345
           AR +  +IK  G  P+  TY+ + DG  +++D    AL L      KGV     T + +L
Sbjct: 190 ARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILL 249

Query: 346 RKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLM 405
             LCKEG++  A  +L  + E  + P  V  NT++N YC+IGD   A+    +M   GL 
Sbjct: 250 NGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLR 309

Query: 406 LDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKL 465
            +   + ++I  FC+ + +D A+E +  M+  G +PS  +Y+ L+DGY          ++
Sbjct: 310 PNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQI 369

Query: 466 LDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWR 525
           L+E    G   +V  Y +LI   CK  K+  A+ +   M G G+L ++ IY  L      
Sbjct: 370 LEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCT 429

Query: 526 AGEPKACSDILDDMYRRRLMITLKIYRSFSASYAK 560
            G+ +      D+M +  +  T+  Y S      K
Sbjct: 430 VGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCK 464



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 120/414 (28%), Positives = 211/414 (50%), Gaps = 5/414 (1%)

Query: 170 VLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFK 229
           +LL+  ++ ++   V ++Y  M Q G + +     +++ +  +S   D V  L  EM   
Sbjct: 1   MLLSVCSESKMHSQVSELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGL 60

Query: 230 DVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA 289
             R D   Y   +    K G    A+ + + M+R  + P++  YN LI G C+E R+R+A
Sbjct: 61  GFRPDKLVYGRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDA 120

Query: 290 RRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRK 347
            +LF +  ++   PN VT+ TLIDGYC+A +++ A+ LRE M  + V P ++T+NS+L  
Sbjct: 121 EKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSG 180

Query: 348 LCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTA-SAMKVKNRMLEAGLML 406
           LCK  RI +A  +LNE+      PD  T + + +   K  D A +A+ +    +  G+ +
Sbjct: 181 LCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKI 240

Query: 407 DQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLL 466
           D +T   L++G CK  +++ A+E+L  +++ G  P    Y+ +V+GYC   + +  +  +
Sbjct: 241 DNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTI 300

Query: 467 DEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRA 526
           ++  SRGL  +   + ++I +FC+ + +D A+     M G GI      Y  L   Y R 
Sbjct: 301 EQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRL 360

Query: 527 GEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEIL--DLFWSHVVDRGLM 578
                C  IL++M        +  Y S      KD +IL  ++    +V RG++
Sbjct: 361 CVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVL 414



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 113/451 (25%), Positives = 208/451 (46%), Gaps = 38/451 (8%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           +++F+ M+   ++P++    VL+  L K++      K++ +M    +V N   +N LI  
Sbjct: 86  MELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTFNTLIDG 145

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
            CK+ +VD    L   M+ + V   + T+N+L++  CK     EA  + + ++  G  PD
Sbjct: 146 YCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPD 205

Query: 270 IVTYNS------------------------------------LIHGFCREGRMREARRLF 293
             TY+                                     L++G C+EG++ +A  + 
Sbjct: 206 GFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVL 265

Query: 294 RDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
           + +   G  P  V Y T+++GYC+  D++ A+   E M ++G+ P  + +NS++ K C+ 
Sbjct: 266 KSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEM 325

Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
             I  A   + +M  K IAP   T N LI+ Y ++   +   ++   M E G   +  +Y
Sbjct: 326 QMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISY 385

Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
            +LI+  CK  ++  A+ +L  M+  G  P+   Y+ L+DG C        L+  DE   
Sbjct: 386 GSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSK 445

Query: 472 RGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKA 531
            G+   +  Y +LI+  CK  K+  A+ +F L+   G   D + Y SL   Y  AG  + 
Sbjct: 446 NGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQK 505

Query: 532 CSDILDDMYRRRLMITLKIYRSFSASYAKDN 562
           C ++ + M +  L  T+  +    +  +K+ 
Sbjct: 506 CLELYETMKKLGLKPTINTFHPLISGCSKEG 536



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 127/550 (23%), Positives = 241/550 (43%), Gaps = 67/550 (12%)

Query: 83  TMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIH------DDPDG------NS 130
            +I  L K K  + A+ +  ++++R+ +      N L+  +      D   G        
Sbjct: 106 VLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKE 165

Query: 131 HVLSWLVIFYANL------KMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAK-DRLTDM 183
            V   ++ F + L      +  ++   + ++++ +  +P     +++ + L K D     
Sbjct: 166 KVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGA 225

Query: 184 VWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIA 243
              +Y++ +  GV  + +  ++L++  CK   V+K E++L  +    +      YNT++ 
Sbjct: 226 ALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVN 285

Query: 244 LYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATP 301
            YC+ G    A+   ++ME  G+ P+ + +NS+I  FC    + +A    + +  KG  P
Sbjct: 286 GYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAP 345

Query: 302 NHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLL 361
           +  TY  LIDGY R        ++ E M   G  P V++Y S++  LCK+G+I +A  +L
Sbjct: 346 SVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVL 405

Query: 362 NEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKA 421
            +M  + + P+    N LI+  C +G    A++  + M + G+     TY +LI G CK 
Sbjct: 406 RDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKM 465

Query: 422 KEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVY 481
            ++  A+E+ F +   G  P   +Y+ L+ GY N  N +  L+L +     GL   ++ +
Sbjct: 466 GKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTF 525

Query: 482 RALIRRFCKKEKVDYAQRLFN-LMQGN--------------------------------- 507
             LI   C KE +   + LFN ++Q N                                 
Sbjct: 526 HPLISG-CSKEGIKLKETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVD 584

Query: 508 -GILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIY----------RSFSA 556
            G+  D+  Y SL   + + G+     D++DDM  + L+     Y          + F+ 
Sbjct: 585 MGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIPEADTYSLLIQGHCDLKDFNG 644

Query: 557 SYAKDNEILD 566
           +Y    E+L+
Sbjct: 645 AYVWYREMLE 654



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/372 (28%), Positives = 179/372 (48%), Gaps = 3/372 (0%)

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
           +  ++M     +   +M    + P +    +L++   +  +    +++ ++M + G   N
Sbjct: 322 FCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPN 381

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
           +  Y  LI+  CK   + + E +L +M  + V  +   YN LI   C  G   EAL   D
Sbjct: 382 VISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFD 441

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRAN 317
            M + GI   IVTYNSLI G C+ G+++EA  +F  I   G  P+ +TY +LI GY  A 
Sbjct: 442 EMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAG 501

Query: 318 DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCN 377
           + ++ L L E M   G+ P + T++ ++    KEG I+    L NEM +  ++PD V  N
Sbjct: 502 NSQKCLELYETMKKLGLKPTINTFHPLISGCSKEG-IKLKETLFNEMLQMNLSPDRVVYN 560

Query: 378 TLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA 437
            +I+ Y + G    A  ++  M++ G+  D  TY +LI G  K  ++   K+L+  M   
Sbjct: 561 AMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAK 620

Query: 438 GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYA 497
           G  P   +YS L+ G+C+  +         E +  G   +V +   L     K  ++  A
Sbjct: 621 GLIPEADTYSLLIQGHCDLKDFNGAYVWYREMLENGFLPNVCICNELSTGLRKDGRLQEA 680

Query: 498 QRLFNLMQGNGI 509
           Q + + M  NG+
Sbjct: 681 QSICSEMIANGM 692


>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Glycine max]
          Length = 892

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 152/580 (26%), Positives = 274/580 (47%), Gaps = 36/580 (6%)

Query: 17  ISAIMLKGHWAKLLNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKH 76
           I  I+ +  W K  +P++  +L  +    +L +L+N    P  +  FF+W      N+ H
Sbjct: 29  IFTILSRPRWRK--DPSL-KTLIPSLTPSLLCSLFNLNPDPLTALNFFRWIRRH-HNFPH 84

Query: 77  SLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS----VLNALVKIHDDPD--GNS 130
           SL +H +++ +L +++  ++A+N+  + ++    ++P     +LN L +++       + 
Sbjct: 85  SLATHHSLLLLLVRHRTLRAAENV--RNSMIKSCTSPHDATFLLNLLRRMNTAAAAADHQ 142

Query: 131 HVLSW---------LVIFYANLKMTQDGLQVFDQMRVHN---LMPHLHACTVLLNSLAKD 178
           H L++         L++  +   M  + + ++ +M   N   + P+L     +LNS  K 
Sbjct: 143 HQLAFKLSLTSYNRLLMCLSRFSMVDEMISLYKEMLTDNGNSVFPNLITLNTMLNSYCKL 202

Query: 179 RLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTY 238
               +    + ++++     ++  Y  L+   C++ DV++   + C M     R +  +Y
Sbjct: 203 GNMAVARLFFVRILRCEPGPDLFTYTSLVLGYCRNDDVERACGVFCVMP----RRNAVSY 258

Query: 239 NTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK- 297
             LI   C+ G  +EAL    RM  +G  P + TY  L+   C  GR  EA  LF +++ 
Sbjct: 259 TNLIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRE 318

Query: 298 -GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRD 356
            G  PN  TYT LID  C+   ++EAL++   M  KGV P VV +N+++   CK G + D
Sbjct: 319 RGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMED 378

Query: 357 ANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIH 416
           A  +L  M  KK+ P+  T N LI  +C+      AM + N+M+E+ L  D  TY  LIH
Sbjct: 379 AVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIH 438

Query: 417 GFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCV 476
           G C+   +D A  L   M+  GFSP   +++  +   C         ++L+    + +  
Sbjct: 439 GLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKA 498

Query: 477 DVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDIL 536
           +   Y ALI  +CK  K+++A  LF  M     L +S+ +  +     + G+ +    ++
Sbjct: 499 NEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLV 558

Query: 537 DDMYRRRLMITLKIYRSFSASYAKD------NEILDLFWS 570
           +DM +  +  TL  Y        K+      NEIL+   S
Sbjct: 559 EDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLIS 598



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 116/396 (29%), Positives = 196/396 (49%), Gaps = 2/396 (0%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
            + L+ + +MR     P +   TVL+ +L +         ++ +M + G   N++ Y VL
Sbjct: 272 HEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNVYTYTVL 331

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           I   CK   +D+  K+L EM  K V   +  +N LI  YCK+GM  +A+ V   ME + +
Sbjct: 332 IDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKV 391

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDIKGA--TPNHVTYTTLIDGYCRANDLEEALR 324
            P++ TYN LI GFCR   M  A  L   +  +  +P+ VTY TLI G C    ++ A R
Sbjct: 392 CPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASR 451

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           L  +M   G  P   T+N+ +  LC+ GR+ +A+++L  + EK +  +      LI+ YC
Sbjct: 452 LFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYC 511

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           K G    A  +  RML    + +  T+  +I G  K  ++  A  L+  M      P+  
Sbjct: 512 KAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLH 571

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
           +Y+ LV+    + + +   ++L+  +S G   +V  Y A I+ +C + +++ A+ +   +
Sbjct: 572 TYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKI 631

Query: 505 QGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMY 540
           +  G+L DS IY  L  AY   G   +   +L  M+
Sbjct: 632 KNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMF 667



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 106/374 (28%), Positives = 186/374 (49%), Gaps = 2/374 (0%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           + L +F +MR     P+++  TVL++ L K+   D   K+  +MV+ GV  ++  +N LI
Sbjct: 308 EALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALI 367

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
            + CK   ++    +L  ME K V  ++ TYN LI  +C+      A+A+ ++M    +S
Sbjct: 368 GSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLS 427

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
           PD+VTYN+LIHG C  G +  A RLFR +   G +P+  T+   +   CR   + EA ++
Sbjct: 428 PDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQI 487

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
            E +  K V      Y +++   CK G+I  A  L   M  ++  P+++T N +I+   K
Sbjct: 488 LESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRK 547

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            G    AM +   M +  +     TY  L+    K  + D A E+L  ++ +G+ P+  +
Sbjct: 548 EGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVT 607

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+  +  YC++   E   +++ +  + G+ +D  +Y  LI  +     +D A  +   M 
Sbjct: 608 YTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMF 667

Query: 506 GNGILGDSVIYTSL 519
           G G     + Y+ L
Sbjct: 668 GTGCEPSYLTYSIL 681



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 112/448 (25%), Positives = 198/448 (44%), Gaps = 31/448 (6%)

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           L+  Y    M +D + V   M    + P++     L+    + +  D    +  KMV+  
Sbjct: 366 LIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESK 425

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
           +  ++  YN LIH  C+   VD   +L   M       D +T+N  +   C+ G   EA 
Sbjct: 426 LSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAH 485

Query: 256 AVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGY 313
            + + ++ + +  +   Y +LI G+C+ G++  A  LF+ +  +   PN +T+  +IDG 
Sbjct: 486 QILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGL 545

Query: 314 CRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDN 373
            +   +++A+ L E MA   V P + TYN ++ ++ KE     AN +LN +      P+ 
Sbjct: 546 RKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNV 605

Query: 374 VTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFG 433
           VT    I AYC  G    A ++  ++   G++LD F Y  LI+ +     +D A  +L  
Sbjct: 606 VTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRR 665

Query: 434 MLDAGFSPSYCSYSWLVDGYC-NKNNEE---------------------------ALLKL 465
           M   G  PSY +YS L+      K+ +E                            +  +
Sbjct: 666 MFGTGCEPSYLTYSILMKHLVIEKHKKEGSNPVGLDVSLTNISVDNTDIWSKIDFGITTV 725

Query: 466 LDEFVSRGLCV-DVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYW 524
           L E ++   CV +++ Y  LI   CK  +++ A  L++ M+  GI    +I+ SL  +  
Sbjct: 726 LFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLLSSCC 785

Query: 525 RAGEPKACSDILDDMYRRRLMITLKIYR 552
           + G       +LD M     +  L+ Y+
Sbjct: 786 KLGMFGEAVTLLDSMMECSHLAHLESYK 813



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 98/407 (24%), Positives = 164/407 (40%), Gaps = 31/407 (7%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           Q+ + ++  ++  + HA T L++   K    +    ++K+M+    + N   +NV+I   
Sbjct: 486 QILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGL 545

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
            K   V     L+ +M   DV+  L TYN L+    K+     A  + +R+   G  P++
Sbjct: 546 RKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNV 605

Query: 271 VTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREV 328
           VTY + I  +C +GR+ EA  +   IK  G   +   Y  LI+ Y     L+ A  +   
Sbjct: 606 VTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRR 665

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANR----------------------------- 359
           M   G  P  +TY+ +++ L  E   ++ +                              
Sbjct: 666 MFGTGCEPSYLTYSILMKHLVIEKHKKEGSNPVGLDVSLTNISVDNTDIWSKIDFGITTV 725

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
           L  +M E    P+  T + LIN  CK+G    A  + + M E G+   +  + +L+   C
Sbjct: 726 LFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLLSSCC 785

Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
           K      A  LL  M++        SY  L+ G   + N+E    +    +  G   D  
Sbjct: 786 KLGMFGEAVTLLDSMMECSHLAHLESYKLLICGLFEQMNKEKAEAVFCSLLRCGYNYDEV 845

Query: 480 VYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRA 526
            ++ LI    K   VD    L NLM+ NG       Y+ L     RA
Sbjct: 846 AWKVLIDGLAKTGYVDQCSELLNLMEKNGCRLHPETYSMLMQELNRA 892



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 90/394 (22%), Positives = 166/394 (42%), Gaps = 35/394 (8%)

Query: 128 GNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKV 187
            N H  + L+  Y      +    +F +M     +P+     V+++ L K+        +
Sbjct: 498 ANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLL 557

Query: 188 YKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCK 247
            + M +  V   +H YN+L+    K  D D+  ++L  +     + ++ TY   I  YC 
Sbjct: 558 VEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCS 617

Query: 248 KGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA----RRLFRDIKGATPNH 303
           +G   EA  +  +++ EG+  D   YN LI+ +   G +  A    RR+F    G  P++
Sbjct: 618 QGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFG--TGCEPSY 675

Query: 304 VTYTTL-----IDGYCRAN------------------------DLEEALRLREVMAAKGV 334
           +TY+ L     I+ + +                          D      L E MA  G 
Sbjct: 676 LTYSILMKHLVIEKHKKEGSNPVGLDVSLTNISVDNTDIWSKIDFGITTVLFEKMAECGC 735

Query: 335 YPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMK 394
            P + TY+ ++  LCK GR+  A  L + M E  I+P  +  N+L+++ CK+G    A+ 
Sbjct: 736 VPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLLSSCCKLGMFGEAVT 795

Query: 395 VKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYC 454
           + + M+E   +    +YK LI G  +    + A+ +   +L  G++    ++  L+DG  
Sbjct: 796 LLDSMMECSHLAHLESYKLLICGLFEQMNKEKAEAVFCSLLRCGYNYDEVAWKVLIDGLA 855

Query: 455 NKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRF 488
                +   +LL+     G  +    Y  L++  
Sbjct: 856 KTGYVDQCSELLNLMEKNGCRLHPETYSMLMQEL 889


>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
 gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
          Length = 600

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 148/478 (30%), Positives = 228/478 (47%), Gaps = 46/478 (9%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKD-RLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           D   VFD MR H   P+      LL+ L    R++D    +Y++M++ G   ++  YN L
Sbjct: 68  DAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSD-AQALYERMIKAGYSPDVVTYNTL 126

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           +H  CK   +D+  K+      +    D+ TYN LI  +CK     EA  +  RM  E +
Sbjct: 127 LHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESL 186

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRA-NDLEEALRL 325
            PD+VTYNSL++G C+ GR+ EAR L  D KG +PN +TY+TLI G CR    LE A +L
Sbjct: 187 VPDVVTYNSLVNGLCKNGRVDEARMLIVD-KGFSPNVITYSTLISGLCRELRRLESARQL 245

Query: 326 REVMAAKGVYPGVVTYN--------------------SILRK---------------LCK 350
            E M   G  P +V+YN                    S+LR+               L K
Sbjct: 246 LEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLK 305

Query: 351 EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
           E R+ +A  L + + +  + PD +T    I+  CK G    A+ +   M E G + D  +
Sbjct: 306 EDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVS 365

Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFV 470
           + A+I+G CK K +D A+ LL GM   G SP+  S++ L+ G C     +  +    E +
Sbjct: 366 HNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEML 425

Query: 471 SRGLCVDVSVYRALIRRFCK---KEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
            RG+   V  Y  L+   CK   + ++  A  LF+ M   G + D V Y++L     +AG
Sbjct: 426 KRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAG 485

Query: 528 EPKACSDILDDMYRRRLMITLKIYRSFSASYA---KDNEILDLFWSHVVDRGLMSKHI 582
           +      +L  M  +  +  +  Y S  +      K +E L+LF + +V++G +   I
Sbjct: 486 KLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVA-MVEKGCVPDTI 542



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 125/436 (28%), Positives = 217/436 (49%), Gaps = 39/436 (8%)

Query: 152 VFDQM-RVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           V+D++ R+++  P  +   +LL SL K    +   +  ++++  G+  +I  +N+ I   
Sbjct: 4   VYDKLVRIYS--PDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGL-CDISTFNIYISGL 60

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           C++S +   + +   M       +  TYN L++  C  G   +A A+ +RM + G SPD+
Sbjct: 61  CRASRIGDAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDV 120

Query: 271 VTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
           VTYN+L+HGFC+ G++ EA ++F     +G  P+ VTY  LI+G+C+A+ L+EA R+ + 
Sbjct: 121 VTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQR 180

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRD-------------------------------- 356
           M ++ + P VVTYNS++  LCK GR+ +                                
Sbjct: 181 MVSESLVPDVVTYNSLVNGLCKNGRVDEARMLIVDKGFSPNVITYSTLISGLCRELRRLE 240

Query: 357 -ANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALI 415
            A +LL +M      PD V+ N LI+   +    + A+K+   +L  G   +  TY  LI
Sbjct: 241 SARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILI 300

Query: 416 HGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLC 475
            G  K   ++ A EL  G++  G  P   +Y+  +DG C     E  L +L +   +G  
Sbjct: 301 DGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCV 360

Query: 476 VDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDI 535
            DV  + A+I   CK+++VD A+ L + M+  G   +++ + +L     RAG+ K     
Sbjct: 361 PDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTT 420

Query: 536 LDDMYRRRLMITLKIY 551
             +M +R +  T+  Y
Sbjct: 421 FKEMLKRGVKPTVVTY 436



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 130/450 (28%), Positives = 214/450 (47%), Gaps = 50/450 (11%)

Query: 119 LVKIHDDPDGNSHVLSWLVIFYANLKMTQ--DGLQVFDQMRVHNLMPHLHACTVLLNSLA 176
           ++K    PD    V+++  + +   K+ +  + L++FD       +P +     L+N   
Sbjct: 111 MIKAGYSPD----VVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFC 166

Query: 177 KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLF 236
           K    D   ++ ++MV   +V ++  YN L++  CK+  VD+   L+ +  F     ++ 
Sbjct: 167 KADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARMLIVDKGFS---PNVI 223

Query: 237 TYNTLIALYCKKGMHYE-ALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD 295
           TY+TLI+  C++    E A  + ++M   G  PDIV+YN+LIHG  RE  + EA +LF  
Sbjct: 224 TYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGS 283

Query: 296 I-------------------------------------KGATPNHVTYTTLIDGYCRAND 318
           +                                      G  P+ +TYT  IDG C+A  
Sbjct: 284 VLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGR 343

Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT 378
           +E+AL + + M  KG  P VV++N+++  LCKE R+ +A  LL+ M  K  +P+ ++ NT
Sbjct: 344 VEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNT 403

Query: 379 LINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKE---LLFGML 435
           LI   C+ G    AM     ML+ G+     TY  L+ G CKA++    KE   L   M+
Sbjct: 404 LICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMI 463

Query: 436 DAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVD 495
           + G  P   +YS L+DG       +   +LL    ++G   +V  Y +LI   C  +KVD
Sbjct: 464 EKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVD 523

Query: 496 YAQRLFNLMQGNGILGDSVIYTSLAYAYWR 525
            A  LF  M   G + D++ Y ++  A  +
Sbjct: 524 EALELFVAMVEKGCVPDTITYGTIISALCK 553



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 126/474 (26%), Positives = 228/474 (48%), Gaps = 21/474 (4%)

Query: 50  LYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIA---- 105
           L+  C +  L  A   +  +    +   + ++  +I+   K      AQ +L+++     
Sbjct: 127 LHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESL 186

Query: 106 LRDFLSTPSVLNALVK---------IHDDPDGNSHVLSWLVIFYA---NLKMTQDGLQVF 153
           + D ++  S++N L K         +  D   + +V+++  +       L+  +   Q+ 
Sbjct: 187 VPDVVTYNSLVNGLCKNGRVDEARMLIVDKGFSPNVITYSTLISGLCRELRRLESARQLL 246

Query: 154 DQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKS 213
           ++M ++   P + +   L++ LA+++      K++  +++ G    +  YN+LI    K 
Sbjct: 247 EKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKE 306

Query: 214 SDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTY 273
             V++  +L   +    +  D  TY   I   CK G   +AL +   M+ +G  PD+V++
Sbjct: 307 DRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSH 366

Query: 274 NSLIHGFCREGRMREARRLFR--DIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAA 331
           N++I+G C+E R+ EA  L    + KG +PN +++ TLI G CRA   ++A+   + M  
Sbjct: 367 NAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLK 426

Query: 332 KGVYPGVVTYNSILRKLCK---EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           +GV P VVTYN ++  LCK   EGRI++A  L + M EK   PD VT + LI+   K G 
Sbjct: 427 RGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGK 486

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
              A ++   M   G + + +TY +LI G C   ++D A EL   M++ G  P   +Y  
Sbjct: 487 LDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGT 546

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
           ++   C +   +  L L D  +  G+     +Y +LI   C   +VD A +L  
Sbjct: 547 IISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDGLCAVARVDEALKLLQ 600



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 98/323 (30%), Positives = 159/323 (49%), Gaps = 13/323 (4%)

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEALR 324
           SPD  T   L+    + G++ +A R      +KG   +  T+   I G CRA+ + +A  
Sbjct: 13  SPDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGLC-DISTFNIYISGLCRASRIGDAQT 71

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           + + M   G +P  +TYN++L  LC  GR+ DA  L   M +   +PD VT NTL++ +C
Sbjct: 72  VFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFC 131

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           K+G    A+K+ +  ++ G + D  TY ALI+GFCKA ++D A+ +L  M+     P   
Sbjct: 132 KVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVV 191

Query: 445 SYSWLVDGYC-NKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK-EKVDYAQRLFN 502
           +Y+ LV+G C N   +EA + ++D    +G   +V  Y  LI   C++  +++ A++L  
Sbjct: 192 TYNSLVNGLCKNGRVDEARMLIVD----KGFSPNVITYSTLISGLCRELRRLESARQLLE 247

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKD- 561
            M  NG   D V Y +L +   R         +   + R+     +  Y        K+ 
Sbjct: 248 KMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKED 307

Query: 562 --NEILDLFWSHVVDRGLMSKHI 582
             NE  +LF S +V  GL    I
Sbjct: 308 RVNEAFELF-SGLVKHGLEPDAI 329


>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
 gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
 gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
 gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 485

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 125/378 (33%), Positives = 198/378 (52%), Gaps = 5/378 (1%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           + +F  M V  +   L++  +++N L +     +   V  KM++ G   ++   + LI+ 
Sbjct: 89  ISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLING 148

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
            C+ + V     L+ +ME    R D+  YNT+I   CK G+  +A+ + DRMER+G+  D
Sbjct: 149 FCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRAD 208

Query: 270 IVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEALRLRE 327
            VTYNSL+ G C  GR  +A RL RD  ++   PN +T+T +ID + +     EA++L E
Sbjct: 209 AVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYE 268

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
            M  + V P V TYNS++  LC  GR+ +A ++L+ M  K   PD VT NTLIN +CK  
Sbjct: 269 EMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSK 328

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
                 K+   M + GL+ D  TY  +I G+ +A   D A+E +F  +D+   P+  +YS
Sbjct: 329 RVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQE-IFSRMDS--RPNIRTYS 385

Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGN 507
            L+ G C     E  L L +      + +D++ Y  +I   CK   V+ A  LF  +   
Sbjct: 386 ILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCK 445

Query: 508 GILGDSVIYTSLAYAYWR 525
           G+  D V YT++   + R
Sbjct: 446 GLKPDVVSYTTMISGFCR 463



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 106/320 (33%), Positives = 171/320 (53%), Gaps = 2/320 (0%)

Query: 187 VYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYC 246
           ++ KM+Q   + +I  ++ ++    KS + D V  L   ME   +  DL++YN +I   C
Sbjct: 56  LFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLC 115

Query: 247 KKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHV 304
           +      AL+V  +M + G  PD+VT +SLI+GFC+  R+ +A  L   ++  G  P+ V
Sbjct: 116 RCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVV 175

Query: 305 TYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM 364
            Y T+IDG C+   + +A+ L + M   GV    VTYNS++  LC  GR  DA RL+ +M
Sbjct: 176 IYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDM 235

Query: 365 NEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEM 424
             + I P+ +T   +I+ + K G  + AMK+   M    +  D FTY +LI+G C    +
Sbjct: 236 VMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRV 295

Query: 425 DIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRAL 484
           D AK++L  M+  G  P   +Y+ L++G+C     +   KL  E   RGL  D   Y  +
Sbjct: 296 DEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTI 355

Query: 485 IRRFCKKEKVDYAQRLFNLM 504
           I+ + +  + D AQ +F+ M
Sbjct: 356 IQGYFQAGRPDAAQEIFSRM 375



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 95/350 (27%), Positives = 177/350 (50%), Gaps = 7/350 (2%)

Query: 109 FLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHAC 168
           F+   SV+  ++K   +PD     +S L+  +       D + +  +M      P +   
Sbjct: 120 FVIALSVVGKMMKFGYEPD--VVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIY 177

Query: 169 TVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEF 228
             +++   K  L +   +++ +M + GV A+   YN L+   C S       +L+ +M  
Sbjct: 178 NTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVM 237

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
           +D+  ++ T+  +I ++ K+G   EA+ + + M R  + PD+ TYNSLI+G C  GR+ E
Sbjct: 238 RDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDE 297

Query: 289 ARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILR 346
           A+++   +  KG  P+ VTY TLI+G+C++  ++E  +L   MA +G+    +TYN+I++
Sbjct: 298 AKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQ 357

Query: 347 KLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLML 406
              + GR   A  + + M+ +   P+  T + L+   C       A+ +   M ++ + L
Sbjct: 358 GYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIEL 414

Query: 407 DQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNK 456
           D  TY  +IHG CK   ++ A +L   +   G  P   SY+ ++ G+C K
Sbjct: 415 DITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRK 464



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 93/323 (28%), Positives = 158/323 (48%), Gaps = 2/323 (0%)

Query: 222 LLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFC 281
           L C+M        +  ++ +++   K   +   +++   ME  GI  D+ +YN +I+  C
Sbjct: 56  LFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLC 115

Query: 282 REGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVV 339
           R  R   A  +   +   G  P+ VT ++LI+G+C+ N + +A+ L   M   G  P VV
Sbjct: 116 RCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVV 175

Query: 340 TYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRM 399
            YN+I+   CK G + DA  L + M    +  D VT N+L+   C  G  + A ++   M
Sbjct: 176 IYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDM 235

Query: 400 LEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNE 459
           +   ++ +  T+ A+I  F K  +   A +L   M      P   +Y+ L++G C     
Sbjct: 236 VMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRV 295

Query: 460 EALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
           +   ++LD  V++G   DV  Y  LI  FCK ++VD   +LF  M   G++GD++ Y ++
Sbjct: 296 DEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTI 355

Query: 520 AYAYWRAGEPKACSDILDDMYRR 542
              Y++AG P A  +I   M  R
Sbjct: 356 IQGYFQAGRPDAAQEIFSRMDSR 378



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 61/284 (21%), Positives = 114/284 (40%), Gaps = 72/284 (25%)

Query: 61  CAFFKWAESA-----------VPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALR-- 107
           C   +W+++A           VPN    + +   +I +  K   F  A  + E++  R  
Sbjct: 220 CCSGRWSDAARLMRDMVMRDIVPN----VITFTAVIDVFVKEGKFSEAMKLYEEMTRRCV 275

Query: 108 --DFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHL 165
             D  +  S++N L  +H   D                    +  Q+ D M     +P +
Sbjct: 276 DPDVFTYNSLINGLC-MHGRVD--------------------EAKQMLDLMVTKGCLPDV 314

Query: 166 HACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVA--------------------------- 198
                L+N   K +  D   K++++M Q G+V                            
Sbjct: 315 VTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSR 374

Query: 199 -----NIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYE 253
                NI  Y++L++  C +  V+K   L   M+  ++  D+ TYN +I   CK G   +
Sbjct: 375 MDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVED 434

Query: 254 ALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK 297
           A  +   +  +G+ PD+V+Y ++I GFCR+ +  ++  L+R ++
Sbjct: 435 AWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQ 478



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/204 (22%), Positives = 93/204 (45%)

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
           L  +M + +  P  V  + +++   K  +    + + + M   G+  D ++Y  +I+  C
Sbjct: 56  LFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLC 115

Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
           +     IA  ++  M+  G+ P   + S L++G+C  N     + L+ +    G   DV 
Sbjct: 116 RCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVV 175

Query: 480 VYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
           +Y  +I   CK   V+ A  LF+ M+ +G+  D+V Y SL      +G     + ++ DM
Sbjct: 176 IYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDM 235

Query: 540 YRRRLMITLKIYRSFSASYAKDNE 563
             R ++  +  + +    + K+ +
Sbjct: 236 VMRDIVPNVITFTAVIDVFVKEGK 259


>gi|357167759|ref|XP_003581319.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Brachypodium distachyon]
          Length = 554

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 117/345 (33%), Positives = 188/345 (54%), Gaps = 6/345 (1%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           +VFD+MR  ++ P +     L++ + + R  D V  +YK+M  +GV  +++ Y  LI   
Sbjct: 207 KVFDEMR-RSVQPTVVTFNTLISGMCRARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGF 265

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           C++  ++   K+  EM    V  +   + TLI  +CK+G     + +   M   G+ PD+
Sbjct: 266 CRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDL 325

Query: 271 VTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREV 328
           V YN+L++G CR   ++ A  +  ++K  G  P+ VTYTTLIDG C+   L+ A+ +++ 
Sbjct: 326 VAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQK 385

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           MA K V    VTY +++  L K GR  DA R+L EM E  + PDN T   +I+A+C+ GD
Sbjct: 386 MAEKEVSLDEVTYTALISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGD 445

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
             +  K+   M   G      TY  +++G CK  +M  A  LL  ML+ G SP   +Y+ 
Sbjct: 446 VKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDITYNI 505

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEK 493
           L+DG C K+ + A  + L+   S+G+  D +VY +LI    KK+ 
Sbjct: 506 LLDGQC-KHGKVANSEELES--SKGMVPDFAVYTSLISELAKKKP 547



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 123/412 (29%), Positives = 203/412 (49%), Gaps = 13/412 (3%)

Query: 111 STPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQ-VFDQMRVHNLMPHLHACT 169
           S P +L A       P   + ++S L   YA+  +  D    V   +R    +P    C+
Sbjct: 105 SPPDLLPAA-----SPGDPAPLVSELAAAYADEGLLPDACSLVLLALRRGISLPA-PVCS 158

Query: 170 VLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFK 229
            L++ L     T   +  Y +++  G+     L+NVL+    +  ++    K+  EM  +
Sbjct: 159 GLMSRLPS---TPEAYTFYLQLLDAGMAPETRLFNVLMRDFVRLGELVSARKVFDEMR-R 214

Query: 230 DVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA 289
            V+  + T+NTLI+  C+         +   M   G+ PD+ TY +LI GFCR GRM  A
Sbjct: 215 SVQPTVVTFNTLISGMCRARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENA 274

Query: 290 RRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRK 347
            ++F +++  G  PN V +TTLID +C+  ++   + L + M  +GV P +V YN+++  
Sbjct: 275 VKMFNEMRDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNG 334

Query: 348 LCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLD 407
           LC+   ++ A  ++ EM    + PD VT  TLI+  CK G    AM +K +M E  + LD
Sbjct: 335 LCRARNLKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLD 394

Query: 408 QFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLD 467
           + TY ALI G  KA     A+ +L  M++A   P   +Y+ ++D +C K + +   KLL 
Sbjct: 395 EVTYTALISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLK 454

Query: 468 EFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
           E  ++G    V  Y  ++   CK  ++  A  L + M   G+  D + Y  L
Sbjct: 455 EMQNKGKKPGVVTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDITYNIL 506



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 85/279 (30%), Positives = 148/279 (53%), Gaps = 1/279 (0%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK-GATPNHVTYTTLIDGYCRANDLEEAL 323
           G++P+   +N L+  F R G +  AR++F +++    P  VT+ TLI G CRA DL+   
Sbjct: 181 GMAPETRLFNVLMRDFVRLGELVSARKVFDEMRRSVQPTVVTFNTLISGMCRARDLDAVD 240

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
            L + M+  GV P V TY ++++  C+ GR+ +A ++ NEM +  + P+ V   TLI+A+
Sbjct: 241 GLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAH 300

Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY 443
           CK G+  + M +   M   G+M D   Y AL++G C+A+ +  A+ ++  M +AG  P  
Sbjct: 301 CKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDK 360

Query: 444 CSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNL 503
            +Y+ L+DG C     +  + +  +   + + +D   Y ALI    K  +   A+R+   
Sbjct: 361 VTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLRE 420

Query: 504 MQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRR 542
           M    +  D+  YT +  A+ R G+ K    +L +M  +
Sbjct: 421 MMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNK 459



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 75/259 (28%), Positives = 121/259 (46%), Gaps = 5/259 (1%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N+ V + L+  +        G+ ++  MRV  +MP L A   L+N L + R       + 
Sbjct: 289 NAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIV 348

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
           ++M   G+  +   Y  LI  CCK   +D    +  +M  K+V  D  TY  LI+   K 
Sbjct: 349 EEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKA 408

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTY 306
           G   +A  V   M    + PD  TY  +I  FCR+G ++   +L +++  KG  P  VTY
Sbjct: 409 GRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTY 468

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
             +++G C+   ++ A  L   M   GV P  +TYN +L   CK G++ ++  L    + 
Sbjct: 469 NVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDITYNILLDGQCKHGKVANSEEL---ESS 525

Query: 367 KKIAPDNVTCNTLINAYCK 385
           K + PD     +LI+   K
Sbjct: 526 KGMVPDFAVYTSLISELAK 544



 Score =  108 bits (270), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 62/234 (26%), Positives = 112/234 (47%), Gaps = 1/234 (0%)

Query: 333 GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
           G+ P    +N ++R   + G +  A ++ +EM  + + P  VT NTLI+  C+  D  + 
Sbjct: 181 GMAPETRLFNVLMRDFVRLGELVSARKVFDEM-RRSVQPTVVTFNTLISGMCRARDLDAV 239

Query: 393 MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
             +   M + G+  D +TY ALI GFC+   M+ A ++   M D G +P+   ++ L+D 
Sbjct: 240 DGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDA 299

Query: 453 YCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGD 512
           +C + N  A + L  +   RG+  D+  Y AL+   C+   +  A+ +   M+  G+  D
Sbjct: 300 HCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPD 359

Query: 513 SVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
            V YT+L     + G+     DI   M  + + +    Y +  +  +K    +D
Sbjct: 360 KVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVD 413


>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
          Length = 650

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 118/368 (32%), Positives = 194/368 (52%), Gaps = 4/368 (1%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLA-KDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           + +++ D M +   +P L     ++N L  KDR+++ V  +  +M+  G   N   Y  +
Sbjct: 178 EAVELVDCMVLSQHVPDLITLNTIVNGLCLKDRVSEAV-DLIARMMANGCQPNQFTYGPI 236

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           ++  CKS +      LL +ME + ++  + TY  +I   CK G   +AL+    ME +GI
Sbjct: 237 LNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGI 296

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
             ++ TYNSLI  FC  GR  +  +L RD+  +  TPN VT++ LID   +   L EA  
Sbjct: 297 KANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKD 356

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           L   M  +G+ P  +TYNS++  LC + R+ +AN++++ M  K   PD  T N LIN +C
Sbjct: 357 LYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFC 416

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           K       M++  +M   G++ D  TY  LI GFC+++++ +AK++   M+  G  P   
Sbjct: 417 KAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIM 476

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
           +Y+ L+DG C+    E  L +LD+     + +D+ +Y  +I   C   KVD A  LF  +
Sbjct: 477 TYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSL 536

Query: 505 QGNGILGD 512
              G+  D
Sbjct: 537 PSKGVKRD 544



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 123/438 (28%), Positives = 207/438 (47%), Gaps = 5/438 (1%)

Query: 155 QMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSS 214
           QM +  +   L+   +++N   + R     +    K+ +LG   N   +N L++  C   
Sbjct: 115 QMELKGIAYDLYTLNIMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEG 174

Query: 215 DVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYN 274
            V +  +L+  M       DL T NT++   C K    EA+ +  RM   G  P+  TY 
Sbjct: 175 RVFEAVELVDCMVLSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYG 234

Query: 275 SLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAK 332
            +++  C+ G    A  L R +  +   P+ VTYT +ID  C+   L++AL     M  K
Sbjct: 235 PILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETK 294

Query: 333 GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
           G+   V TYNS++   C  GR  D  +LL +M  +KI P+ VT + LI++  K G    A
Sbjct: 295 GIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEA 354

Query: 393 MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
             + N M+  G+  +  TY +LI+G C  K +D A +++  M+  G  P   +Y+ L++G
Sbjct: 355 KDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILING 414

Query: 453 YCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGD 512
           +C     +  ++L  +   RG+  D   Y  LI+ FC+  K+  A+++F  M   G+   
Sbjct: 415 FCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPG 474

Query: 513 SVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHV 572
            + Y  L       GE +    ILD M++ ++ + + IY          N++ D  WS  
Sbjct: 475 IMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDA-WSLF 533

Query: 573 VDRGLMSKHIFKEMQLRN 590
               L SK + +++Q  N
Sbjct: 534 C--SLPSKGVKRDIQSYN 549



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 113/434 (26%), Positives = 206/434 (47%), Gaps = 12/434 (2%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           + + +  +M  +   P+      +LN + K   T     + +KM    +  ++  Y ++I
Sbjct: 213 EAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIII 272

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
              CK   +D       EME K ++A++FTYN+LI  +C  G   +   +   M    I+
Sbjct: 273 DNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKIT 332

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
           P++VT+++LI    +EG++ EA+ L+ ++  +G  PN +TY +LI G C    L+EA ++
Sbjct: 333 PNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQM 392

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
            ++M +KG  P + TYN ++   CK  ++ D  RL  +M+ + +  D VT +TLI  +C+
Sbjct: 393 MDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQ 452

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
                 A KV   M+  G+     TY  L+ G C   E++ A  +L  M           
Sbjct: 453 SRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGI 512

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+ ++ G CN N  +    L     S+G+  D+  Y  ++   CK+  +  A  LF  M+
Sbjct: 513 YNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMK 572

Query: 506 GNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEIL 565
            +G   D   Y +L  A+ R  +      ++++M R            FS+  +    ++
Sbjct: 573 EDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKR----------CGFSSDASTVKIVM 622

Query: 566 DLFWSHVVDRGLMS 579
           D+  S  +D+  ++
Sbjct: 623 DMLSSGELDKSFLN 636



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 100/370 (27%), Positives = 183/370 (49%), Gaps = 2/370 (0%)

Query: 146 TQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNV 205
           T   L +  +M    + PH+   T+++++L KD   D     + +M   G+ AN+  YN 
Sbjct: 246 TASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNS 305

Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
           LI + C     D   +LL +M  + +  ++ T++ LI    K+G   EA  + + M   G
Sbjct: 306 LIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRG 365

Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEAL 323
           I P+ +TYNSLI+G C + R+ EA ++   +  KG  P+  TY  LI+G+C+A  +++ +
Sbjct: 366 IEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGM 425

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
           RL   M+ +G+    VTY+++++  C+  ++  A ++  EM  + + P  +T   L++  
Sbjct: 426 RLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGL 485

Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY 443
           C  G+   A+ + ++M +  + LD   Y  +IHG C A ++D A  L   +   G     
Sbjct: 486 CDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDI 545

Query: 444 CSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNL 503
            SY+ ++ G C +++      L  +    G   D   Y  LIR   +   +  + +L   
Sbjct: 546 QSYNIMLSGLCKRSSLSEADALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEE 605

Query: 504 MQGNGILGDS 513
           M+  G   D+
Sbjct: 606 MKRCGFSSDA 615



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 106/377 (28%), Positives = 177/377 (46%), Gaps = 37/377 (9%)

Query: 187 VYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYC 246
           +++ M++   +  +  +N L     ++   D V  L  +ME K +  DL+T N +I  +C
Sbjct: 77  LFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLNIMINCFC 136

Query: 247 KKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR--DIKGATPNHV 304
           ++     A +   ++ + G  P+ VT+N+L++G C EGR+ EA  L     +    P+ +
Sbjct: 137 RRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHVPDLI 196

Query: 305 TYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM 364
           T  T+++G C  + + EA+ L   M A G  P   TY  IL ++CK G    A  LL +M
Sbjct: 197 TLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKM 256

Query: 365 NEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC----- 419
             +KI P  VT   +I+  CK G    A+   + M   G+  + FTY +LI  FC     
Sbjct: 257 EHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRW 316

Query: 420 ------------------------------KAKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
                                         K  ++  AK+L   M+  G  P+  +Y+ L
Sbjct: 317 DDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSL 376

Query: 450 VDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGI 509
           + G CN    +   +++D  VS+G   D+  Y  LI  FCK ++VD   RLF  M   G+
Sbjct: 377 IYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGM 436

Query: 510 LGDSVIYTSLAYAYWRA 526
           + D+V Y++L   + ++
Sbjct: 437 IADTVTYSTLIQGFCQS 453



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 85/321 (26%), Positives = 157/321 (48%), Gaps = 2/321 (0%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           DG Q+   M    + P++   + L++SL K+        +Y +M+  G+  N   YN LI
Sbjct: 318 DGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLI 377

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           +  C    +D+  +++  M  K    D++TYN LI  +CK     + + +  +M   G+ 
Sbjct: 378 YGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMI 437

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
            D VTY++LI GFC+  ++  A+++F+++  +G  P  +TY  L+DG C   +LEEAL +
Sbjct: 438 ADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGI 497

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
            + M    +   +  YN I+  +C   ++ DA  L   +  K +  D  + N +++  CK
Sbjct: 498 LDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCK 557

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
               + A  +  +M E G   D  TY  LI    +  ++  + +L+  M   GFS    +
Sbjct: 558 RSSLSEADALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCGFSSDAST 617

Query: 446 YSWLVDGYCNKNNEEALLKLL 466
              ++D   +   +++ L +L
Sbjct: 618 VKIVMDMLSSGELDKSFLNML 638



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 63/284 (22%), Positives = 126/284 (44%), Gaps = 2/284 (0%)

Query: 301 PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRL 360
           P  + +  L     R    +  L L + M  KG+   + T N ++   C+  ++  A   
Sbjct: 88  PTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLNIMINCFCRRRKLGFAFSA 147

Query: 361 LNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCK 420
           + ++ +    P+ VT NTL+N  C  G    A+++ + M+ +  + D  T   +++G C 
Sbjct: 148 MGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHVPDLITLNTIVNGLCL 207

Query: 421 AKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSV 480
              +  A +L+  M+  G  P+  +Y  +++  C   N  + L LL +   R +   V  
Sbjct: 208 KDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVT 267

Query: 481 YRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMY 540
           Y  +I   CK  ++D A   F+ M+  GI  +   Y SL  ++   G     + +L DM 
Sbjct: 268 YTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMI 327

Query: 541 RRRLMITLKIYRSFSASYAKDNEILDL--FWSHVVDRGLMSKHI 582
            R++   +  + +   S  K+ ++ +    ++ ++ RG+    I
Sbjct: 328 TRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTI 371



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 48/240 (20%), Positives = 98/240 (40%), Gaps = 2/240 (0%)

Query: 340 TYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRM 399
           +Y   LR    + +  DA  L   M   +  P  +  N L     +       + +  +M
Sbjct: 57  SYKERLRSGLVDIKKDDAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQM 116

Query: 400 LEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNE 459
              G+  D +T   +I+ FC+ +++  A   +  +   G+ P+  +++ L++G C +   
Sbjct: 117 ELKGIAYDLYTLNIMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRV 176

Query: 460 EALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
              ++L+D  V      D+     ++   C K++V  A  L   M  NG   +   Y  +
Sbjct: 177 FEAVELVDCMVLSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPI 236

Query: 520 AYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDL--FWSHVVDRGL 577
                ++G   +  D+L  M  R++   +  Y     +  KD  + D   F+S +  +G+
Sbjct: 237 LNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGI 296


>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
 gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
          Length = 586

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 132/428 (30%), Positives = 211/428 (49%), Gaps = 18/428 (4%)

Query: 141 ANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDR-LTDMVWKVYKKMVQLGVVAN 199
           ++ +   D L  F+ M     +P +     LL+++ + R   D V  + K+M   G+  N
Sbjct: 66  SSFRNIDDALASFNHMLHRKPLPCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPN 125

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
               N+LI+  C    VD    +L ++    ++  + T+ TLI   CK G   +AL + D
Sbjct: 126 TCTLNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFD 185

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRAN 317
            M   G  PD+ TY ++I+G C+ G    A  L + +   G  P+ VTY+TLID  C+  
Sbjct: 186 DMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDR 245

Query: 318 DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCN 377
            + EAL +   M AKG+ P VV+Y S+++ LC   R ++A+ +LNEM    I PD VT +
Sbjct: 246 LVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFS 305

Query: 378 TLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA 437
            LI+ +CK G+   A  V   M E G+  +  TY +L+HG+    E+  A++L   M+  
Sbjct: 306 LLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITR 365

Query: 438 GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYA 497
           G  P   SYS L++GYC     +   +L +E + +GL  +   Y  LI  FC+  K+  A
Sbjct: 366 GCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREA 425

Query: 498 QRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSAS 557
           + LF  M  NG L D   Y+ L   + + G                L    +++R+   +
Sbjct: 426 RELFKDMHTNGYLPDLCTYSVLLEGFCKQG---------------YLGKAFRLFRAMQGT 470

Query: 558 YAKDNEIL 565
           Y K N ++
Sbjct: 471 YLKPNLVM 478



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 119/419 (28%), Positives = 211/419 (50%), Gaps = 5/419 (1%)

Query: 155 QMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSS 214
           QM +  L P+     +L+N     +  D+ + V  K+++LG+   I  +  LI+  CK+ 
Sbjct: 116 QMELAGLSPNTCTLNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAG 175

Query: 215 DVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYN 274
           +  +  +L  +M  +  + D++TY T+I   CK G    A  +  +M   G  PD+VTY+
Sbjct: 176 EFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYS 235

Query: 275 SLIHGFCREGRMREARRLFR--DIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAK 332
           +LI   C++  + EA  +F     KG +P  V+YT+LI G C  +  +EA  +   M + 
Sbjct: 236 TLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSL 295

Query: 333 GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
            + P +VT++ ++   CKEG + +A  +L  M E  + P+ +T N+L++ Y    +   A
Sbjct: 296 NIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEA 355

Query: 393 MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
            K+ + M+  G   D F+Y  LI+G+C  K +D AK+L   M+  G +P+  SY+ L+  
Sbjct: 356 RKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHA 415

Query: 453 YCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGD 512
           +C         +L  +  + G   D+  Y  L+  FCK+  +  A RLF  MQG  +  +
Sbjct: 416 FCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPN 475

Query: 513 SVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKD---NEILDLF 568
            V+YT L  +  ++G       +  +++   L   ++IY +      K+   +E L+ F
Sbjct: 476 LVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAF 534



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 121/430 (28%), Positives = 205/430 (47%), Gaps = 8/430 (1%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQ--DGLQVFDQMRVHNLMPHLHACTVL 171
           SVL  ++K+   P     ++++  +     K  +    L++FD M      P ++  T +
Sbjct: 147 SVLAKVIKLGLQPT----IITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTI 202

Query: 172 LNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDV 231
           +N L K   T     + KKM ++G   ++  Y+ LI + CK   V++   +   M+ K +
Sbjct: 203 INGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGI 262

Query: 232 RADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARR 291
              + +Y +LI   C      EA A+ + M    I PDIVT++ LI  FC+EG + EA+ 
Sbjct: 263 SPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQG 322

Query: 292 LFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLC 349
           + + +   G  PN +TY +L+ GY    ++ EA +L +VM  +G  P V +Y+ ++   C
Sbjct: 323 VLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYC 382

Query: 350 KEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQF 409
              RI +A +L NEM  + + P+ V+  TLI+A+C++G    A ++   M   G + D  
Sbjct: 383 MVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLC 442

Query: 410 TYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEF 469
           TY  L+ GFCK   +  A  L   M      P+   Y+ L+D  C   N     KL  E 
Sbjct: 443 TYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSEL 502

Query: 470 VSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEP 529
              GL  DV +Y  +I   CK+  +D A   F  M+ +G   +   Y  +   + +  + 
Sbjct: 503 FVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNVIIRGFLQHKDE 562

Query: 530 KACSDILDDM 539
                ++ +M
Sbjct: 563 SRAVQLIGEM 572



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 129/510 (25%), Positives = 239/510 (46%), Gaps = 30/510 (5%)

Query: 12  KFIKTISAIM-LKGHWAKLLNPNIASSLTSTAIHKVLLN-LYNC-CHIPSLSCAFFKWAE 68
           +F K +SAI+ ++ ++  +++ +    L   + +   LN L NC C +  +   F   A+
Sbjct: 92  QFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTLNILINCFCLMQHVDLGFSVLAK 151

Query: 69  SAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALR----DFLSTPSVLNALVKIHD 124
                 + ++ +  T+I+ L K   F  A  + + +  R    D  +  +++N L K+  
Sbjct: 152 VIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKM-- 209

Query: 125 DPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMV 184
              G +   + L+      KM + G Q           P +   + L++SL KDRL +  
Sbjct: 210 ---GETAAAAGLI-----KKMGEVGCQ-----------PDVVTYSTLIDSLCKDRLVNEA 250

Query: 185 WKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIAL 244
             ++  M   G+   +  Y  LI   C  S   +   +L EM   ++  D+ T++ LI +
Sbjct: 251 LDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDI 310

Query: 245 YCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPN 302
           +CK+G   EA  V   M   G+ P+++TYNSL+HG+  +  + EAR+LF  +  +G  P+
Sbjct: 311 FCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPD 370

Query: 303 HVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLN 362
             +Y+ LI+GYC    ++EA +L   M  +G+ P  V+Y +++   C+ G++R+A  L  
Sbjct: 371 VFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFK 430

Query: 363 EMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAK 422
           +M+     PD  T + L+  +CK G    A ++   M    L  +   Y  LI   CK+ 
Sbjct: 431 DMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSG 490

Query: 423 EMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYR 482
            ++ A++L   +   G  P    Y+ +++G C +   +  L+   +    G   +   Y 
Sbjct: 491 NLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYN 550

Query: 483 ALIRRFCKKEKVDYAQRLFNLMQGNGILGD 512
            +IR F + +    A +L   M+  G + D
Sbjct: 551 VIIRGFLQHKDESRAVQLIGEMRDKGFVAD 580



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 93/299 (31%), Positives = 158/299 (52%), Gaps = 2/299 (0%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           + ++M   N+MP +   ++L++   K+        V K M ++GV  N+  YN L+H   
Sbjct: 288 MLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYS 347

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
              +V +  KL   M  +  + D+F+Y+ LI  YC      EA  + + M  +G++P+ V
Sbjct: 348 LQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTV 407

Query: 272 TYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           +Y +LIH FC+ G++REAR LF+D+   G  P+  TY+ L++G+C+   L +A RL   M
Sbjct: 408 SYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAM 467

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
               + P +V Y  ++  +CK G +  A +L +E+    + PD     T+IN  CK G  
Sbjct: 468 QGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLL 527

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
             A++   +M E G   ++F+Y  +I GF + K+   A +L+  M D GF     + +W
Sbjct: 528 DEALEAFRKMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDKGFVADEGTTAW 586


>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g74580
 gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
 gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 763

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 131/443 (29%), Positives = 219/443 (49%), Gaps = 17/443 (3%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           +G ++F +M    +   L     LL  L K        K+  K+++ GV+ N+  YN+ I
Sbjct: 199 EGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFI 258

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
              C+  ++D   +++  +  +  + D+ TYN LI   CK     EA     +M  EG+ 
Sbjct: 259 QGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLE 318

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEALRL 325
           PD  TYN+LI G+C+ G ++ A R+  D    G  P+  TY +LIDG C   +   AL L
Sbjct: 319 PDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALAL 378

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
                 KG+ P V+ YN++++ L  +G I +A +L NEM+EK + P+  T N L+N  CK
Sbjct: 379 FNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCK 438

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
           +G  + A  +   M+  G   D FT+  LIHG+    +M+ A E+L  MLD G  P   +
Sbjct: 439 MGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYT 498

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+ L++G C  +  E +++     V +G   ++  +  L+   C+  K+D A  L   M+
Sbjct: 499 YNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMK 558

Query: 506 GNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR--RRLMITLKIYRSFSASYAKDNE 563
              +  D+V + +L   + + G+       LD  Y   R++    K+    S+S    N 
Sbjct: 559 NKSVNPDAVTFGTLIDGFCKNGD-------LDGAYTLFRKMEEAYKV----SSSTPTYNI 607

Query: 564 ILDLFWSHVVDRGLMSKHIFKEM 586
           I+  F   +     M++ +F+EM
Sbjct: 608 IIHAFTEKL--NVTMAEKLFQEM 628



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 123/512 (24%), Positives = 235/512 (45%), Gaps = 28/512 (5%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHV 132
            +KH+L ++ ++I  L     F++ + +L  + +R+ +                   +H+
Sbjct: 35  GFKHTLSTYRSVIEKLGYYGKFEAMEEVL--VDMRENVG------------------NHM 74

Query: 133 LSWLVIF----YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           L  + +     Y      Q+ + VF++M  ++  P + +   +++ L      D   KVY
Sbjct: 75  LEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVY 134

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
            +M   G+  +++ + + + + CK+S      +LL  M  +    ++  Y T++  + ++
Sbjct: 135 MRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEE 194

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTY 306
               E   +  +M   G+S  + T+N L+   C++G ++E  +L   +  +G  PN  TY
Sbjct: 195 NFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTY 254

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
              I G C+  +L+ A+R+   +  +G  P V+TYN+++  LCK  + ++A   L +M  
Sbjct: 255 NLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVN 314

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
           + + PD+ T NTLI  YCK G    A ++    +  G + DQFTY++LI G C   E + 
Sbjct: 315 EGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNR 374

Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
           A  L    L  G  P+   Y+ L+ G  N+       +L +E   +GL  +V  +  L+ 
Sbjct: 375 ALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVN 434

Query: 487 RFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMI 546
             CK   V  A  L  +M   G   D   +  L + Y    + +   +ILD M    +  
Sbjct: 435 GLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDP 494

Query: 547 TLKIYRSFSASYAKDNEILDLFWSH--VVDRG 576
            +  Y S      K ++  D+  ++  +V++G
Sbjct: 495 DVYTYNSLLNGLCKTSKFEDVMETYKTMVEKG 526



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 114/443 (25%), Positives = 206/443 (46%), Gaps = 20/443 (4%)

Query: 75  KHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLS 134
           K  + ++  +I+ L KN  F+ A+  L K+                 +++  + +S+  +
Sbjct: 283 KPDVITYNNLIYGLCKNSKFQEAEVYLGKM-----------------VNEGLEPDSYTYN 325

Query: 135 WLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQL 194
            L+  Y    M Q   ++      +  +P       L++ L  +  T+    ++ + +  
Sbjct: 326 TLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGK 385

Query: 195 GVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEA 254
           G+  N+ LYN LI        + +  +L  EM  K +  ++ T+N L+   CK G   +A
Sbjct: 386 GIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDA 445

Query: 255 LAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDG 312
             +   M  +G  PDI T+N LIHG+  + +M  A  +   +   G  P+  TY +L++G
Sbjct: 446 DGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNG 505

Query: 313 YCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPD 372
            C+ +  E+ +   + M  KG  P + T+N +L  LC+  ++ +A  LL EM  K + PD
Sbjct: 506 LCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPD 565

Query: 373 NVTCNTLINAYCKIGDTASAMKVKNRMLEA-GLMLDQFTYKALIHGFCKAKEMDIAKELL 431
            VT  TLI+ +CK GD   A  +  +M EA  +     TY  +IH F +   + +A++L 
Sbjct: 566 AVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLF 625

Query: 432 FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
             M+D    P   +Y  +VDG+C   N     K L E +  G    ++    +I   C +
Sbjct: 626 QEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVE 685

Query: 492 EKVDYAQRLFNLMQGNGILGDSV 514
           ++V  A  + + M   G++ ++V
Sbjct: 686 DRVYEAAGIIHRMVQKGLVPEAV 708



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 124/454 (27%), Positives = 196/454 (43%), Gaps = 21/454 (4%)

Query: 78  LQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVK---IHDDPDGNSHVLS 134
           L +   ++ +L K    K  + +L+K+  R  L      N  ++      + DG   ++ 
Sbjct: 216 LSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVG 275

Query: 135 WL--------VIFYANL-------KMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDR 179
            L        VI Y NL          Q+      +M    L P  +    L+    K  
Sbjct: 276 CLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGG 335

Query: 180 LTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYN 239
           +  +  ++    V  G V +   Y  LI   C   + ++   L  E   K ++ ++  YN
Sbjct: 336 MVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYN 395

Query: 240 TLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--K 297
           TLI     +GM  EA  + + M  +G+ P++ T+N L++G C+ G + +A  L + +  K
Sbjct: 396 TLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISK 455

Query: 298 GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDA 357
           G  P+  T+  LI GY     +E AL + +VM   GV P V TYNS+L  LCK  +  D 
Sbjct: 456 GYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDV 515

Query: 358 NRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHG 417
                 M EK  AP+  T N L+ + C+      A+ +   M    +  D  T+  LI G
Sbjct: 516 METYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDG 575

Query: 418 FCKAKEMDIAKELLFGMLDA-GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCV 476
           FCK  ++D A  L   M +A   S S  +Y+ ++  +  K N     KL  E V R L  
Sbjct: 576 FCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGP 635

Query: 477 DVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGIL 510
           D   YR ++  FCK   V+   +    M  NG +
Sbjct: 636 DGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFI 669



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 74/312 (23%), Positives = 136/312 (43%), Gaps = 4/312 (1%)

Query: 253 EALAVQDRMERE-GISPDIVTYNSLIHGFCREGRMREARRLFRDIKGATPNHV---TYTT 308
           +AL + + M +E G    + TY S+I      G+      +  D++    NH+    Y  
Sbjct: 22  KALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVG 81

Query: 309 LIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKK 368
            +  Y R   ++EA+ + E M      P V +YN+I+  L   G    A+++   M ++ 
Sbjct: 82  AMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRG 141

Query: 369 IAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAK 428
           I PD  +    + ++CK     +A+++ N M   G  ++   Y  ++ GF +        
Sbjct: 142 ITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGY 201

Query: 429 ELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRF 488
           EL   ML +G S    +++ L+   C K + +   KLLD+ + RG+  ++  Y   I+  
Sbjct: 202 ELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGL 261

Query: 489 CKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITL 548
           C++ ++D A R+   +   G   D + Y +L Y   +  + +     L  M    L    
Sbjct: 262 CQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDS 321

Query: 549 KIYRSFSASYAK 560
             Y +  A Y K
Sbjct: 322 YTYNTLIAGYCK 333


>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
          Length = 426

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 125/378 (33%), Positives = 198/378 (52%), Gaps = 5/378 (1%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           + +F  M V  +   L++  +++N L +     +   V  KM++ G   ++   + LI+ 
Sbjct: 30  ISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLING 89

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
            C+ + V     L+ +ME    R D+  YNT+I   CK G+  +A+ + DRMER+G+  D
Sbjct: 90  FCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRAD 149

Query: 270 IVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEALRLRE 327
            VTYNSL+ G C  GR  +A RL RD  ++   PN +T+T +ID + +     EA++L E
Sbjct: 150 AVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYE 209

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
            M  + V P V TYNS++  LC  GR+ +A ++L+ M  K   PD VT NTLIN +CK  
Sbjct: 210 EMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSK 269

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
                 K+   M + GL+ D  TY  +I G+ +A   D A+E +F  +D+   P+  +YS
Sbjct: 270 RVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQE-IFSRMDS--RPNIRTYS 326

Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGN 507
            L+ G C     E  L L +      + +D++ Y  +I   CK   V+ A  LF  +   
Sbjct: 327 ILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCK 386

Query: 508 GILGDSVIYTSLAYAYWR 525
           G+  D V YT++   + R
Sbjct: 387 GLKPDVVSYTTMISGFCR 404



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 105/316 (33%), Positives = 168/316 (53%), Gaps = 2/316 (0%)

Query: 191 MVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGM 250
           M+Q   + +I  ++ ++    KS + D V  L   ME   +  DL++YN +I   C+   
Sbjct: 1   MIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSR 60

Query: 251 HYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTT 308
              AL+V  +M + G  PD+VT +SLI+GFC+  R+ +A  L   ++  G  P+ V Y T
Sbjct: 61  FVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNT 120

Query: 309 LIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKK 368
           +IDG C+   + +A+ L + M   GV    VTYNS++  LC  GR  DA RL+ +M  + 
Sbjct: 121 IIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRD 180

Query: 369 IAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAK 428
           I P+ +T   +I+ + K G  + AMK+   M    +  D FTY +LI+G C    +D AK
Sbjct: 181 IVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAK 240

Query: 429 ELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRF 488
           ++L  M+  G  P   +Y+ L++G+C     +   KL  E   RGL  D   Y  +I+ +
Sbjct: 241 QMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGY 300

Query: 489 CKKEKVDYAQRLFNLM 504
            +  + D AQ +F+ M
Sbjct: 301 FQAGRPDAAQEIFSRM 316



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 95/350 (27%), Positives = 177/350 (50%), Gaps = 7/350 (2%)

Query: 109 FLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHAC 168
           F+   SV+  ++K   +PD     +S L+  +       D + +  +M      P +   
Sbjct: 61  FVIALSVVGKMMKFGYEPD--VVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIY 118

Query: 169 TVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEF 228
             +++   K  L +   +++ +M + GV A+   YN L+   C S       +L+ +M  
Sbjct: 119 NTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVM 178

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
           +D+  ++ T+  +I ++ K+G   EA+ + + M R  + PD+ TYNSLI+G C  GR+ E
Sbjct: 179 RDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDE 238

Query: 289 ARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILR 346
           A+++   +  KG  P+ VTY TLI+G+C++  ++E  +L   MA +G+    +TYN+I++
Sbjct: 239 AKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQ 298

Query: 347 KLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLML 406
              + GR   A  + + M+ +   P+  T + L+   C       A+ +   M ++ + L
Sbjct: 299 GYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIEL 355

Query: 407 DQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNK 456
           D  TY  +IHG CK   ++ A +L   +   G  P   SY+ ++ G+C K
Sbjct: 356 DITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRK 405



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 89/284 (31%), Positives = 143/284 (50%), Gaps = 2/284 (0%)

Query: 261 MEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRAND 318
           ME  GI  D+ +YN +I+  CR  R   A  +   +   G  P+ VT ++LI+G+C+ N 
Sbjct: 36  MEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNR 95

Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT 378
           + +A+ L   M   G  P VV YN+I+   CK G + DA  L + M    +  D VT N+
Sbjct: 96  VFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNS 155

Query: 379 LINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAG 438
           L+   C  G  + A ++   M+   ++ +  T+ A+I  F K  +   A +L   M    
Sbjct: 156 LVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRC 215

Query: 439 FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQ 498
             P   +Y+ L++G C     +   ++LD  V++G   DV  Y  LI  FCK ++VD   
Sbjct: 216 VDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGT 275

Query: 499 RLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRR 542
           +LF  M   G++GD++ Y ++   Y++AG P A  +I   M  R
Sbjct: 276 KLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR 319



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 61/284 (21%), Positives = 114/284 (40%), Gaps = 72/284 (25%)

Query: 61  CAFFKWAESA-----------VPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALR-- 107
           C   +W+++A           VPN    + +   +I +  K   F  A  + E++  R  
Sbjct: 161 CCSGRWSDAARLMRDMVMRDIVPN----VITFTAVIDVFVKEGKFSEAMKLYEEMTRRCV 216

Query: 108 --DFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHL 165
             D  +  S++N L  +H   D                    +  Q+ D M     +P +
Sbjct: 217 DPDVFTYNSLINGLC-MHGRVD--------------------EAKQMLDLMVTKGCLPDV 255

Query: 166 HACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVA--------------------------- 198
                L+N   K +  D   K++++M Q G+V                            
Sbjct: 256 VTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSR 315

Query: 199 -----NIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYE 253
                NI  Y++L++  C +  V+K   L   M+  ++  D+ TYN +I   CK G   +
Sbjct: 316 MDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVED 375

Query: 254 ALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK 297
           A  +   +  +G+ PD+V+Y ++I GFCR+ +  ++  L+R ++
Sbjct: 376 AWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQ 419



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/161 (24%), Positives = 76/161 (47%)

Query: 403 GLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEAL 462
           G+  D ++Y  +I+  C+     IA  ++  M+  G+ P   + S L++G+C  N     
Sbjct: 40  GIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDA 99

Query: 463 LKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYA 522
           + L+ +    G   DV +Y  +I   CK   V+ A  LF+ M+ +G+  D+V Y SL   
Sbjct: 100 IDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAG 159

Query: 523 YWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNE 563
              +G     + ++ DM  R ++  +  + +    + K+ +
Sbjct: 160 LCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGK 200


>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g05670, mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 130/488 (26%), Positives = 234/488 (47%), Gaps = 24/488 (4%)

Query: 80  SHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSV---------------LNALVKIHD 124
           S+  +I+ L +    K A  +L ++  R   STP V               L   +K+ D
Sbjct: 260 SYNIIIYSLCRLGKVKEAHRLLMQMDFRS--STPDVVSYSTVIDGYCHLGELKKALKLMD 317

Query: 125 DPD-----GNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDR 179
           D        N +  + +++    +  + +  +V  +M    ++P     T L++   K  
Sbjct: 318 DMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLG 377

Query: 180 LTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYN 239
                 K + +M+   +  +   Y  LI    +   V + + L  EM  + ++ D  TY 
Sbjct: 378 HVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYT 437

Query: 240 TLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--K 297
           TLI +YCK G    A ++ + M + G++P+IVTY +LI G C+ G +  A  L  ++  K
Sbjct: 438 TLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKK 497

Query: 298 GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDA 357
           G   N   Y ++++G C+A ++E+A++L + M   G+ P  +TY +++   C+ G I  A
Sbjct: 498 GLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKA 557

Query: 358 NRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHG 417
           ++LL EM ++ + P  VT N L+N +C +G      ++   MLE G++ D  TY  L+  
Sbjct: 558 HKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQ 617

Query: 418 FCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVD 477
            C    M+   ++   M + G +P   +Y+ L+ G+C   N +    L  E + +G    
Sbjct: 618 HCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPT 677

Query: 478 VSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILD 537
           V+ Y ALI+RF KK K   A+ LF  M+G+G++ D  IY       +  G+ +   ++ D
Sbjct: 678 VTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCD 737

Query: 538 DMYRRRLM 545
           +   + L+
Sbjct: 738 EAIEKCLL 745



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 138/520 (26%), Positives = 249/520 (47%), Gaps = 30/520 (5%)

Query: 86  HILTKNKHFKSAQNMLEKIALRDFLSTPSVLNA-LVKIHDDPDG-------------NSH 131
            +L +  H   A+ +L+K+     + T    NA L +I ++ +G             + +
Sbjct: 198 QVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAIKVFCEYGISWN 257

Query: 132 VLSWLVIFYA--NLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYK 189
             S+ +I Y+   L   ++  ++  QM   +  P + + + +++            K+  
Sbjct: 258 TTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMD 317

Query: 190 KMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKG 249
            M   G+  N + YN +I   CK     + EK+L EM  + +  D   Y TLI  + K G
Sbjct: 318 DMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLG 377

Query: 250 MHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYT 307
               A    D M  + ISPD +TY +LI GF + G++ E + LF ++  +G  P+ VTYT
Sbjct: 378 HVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYT 437

Query: 308 TLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEK 367
           TLID YC+A ++  A  L   M   G+ P +VTY +++  LCK G +  AN LL+EM +K
Sbjct: 438 TLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKK 497

Query: 368 KIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIA 427
            +  +    N+++N  CK G+   A+K+   M  AG+  D  TY  +I  +C+  ++D A
Sbjct: 498 GLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKA 557

Query: 428 KELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRR 487
            +LL  MLD G  P+  +++ L++G+C     E   +LL   + +G+  D   Y  L+++
Sbjct: 558 HKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQ 617

Query: 488 FCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMIT 547
            C +  ++   +++  M+  G+  DS  Y  L   + +A   K    +  +M  +  + T
Sbjct: 618 HCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPT 677

Query: 548 LKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKEMQ 587
           +  Y +    + K  +  +            ++ +F+EM+
Sbjct: 678 VTSYNALIKRFYKKRKFXE------------ARELFEEMR 705



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 70/314 (22%), Positives = 130/314 (41%), Gaps = 11/314 (3%)

Query: 266 ISPDIVTYNSLIHGFCREGRM-------REARRLFRDIKGATPNHVTYTTLIDGYCRAND 318
           +S D+   + L+H +    ++       +   RL    K   PN + +            
Sbjct: 146 VSNDLRLAHELVHDYFLNSKLEIGVKMTQFTHRLIYTYKYWGPNPIAFDIFFQVLVEIGH 205

Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGR-IRDANRLLNEMNEKKIAPDNVTCN 377
           L EA +L + + + G+   V + N+ L ++      I  A ++  E     I+ +  + N
Sbjct: 206 LSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAIKVFCEYG---ISWNTTSYN 262

Query: 378 TLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA 437
            +I + C++G    A ++  +M       D  +Y  +I G+C   E+  A +L+  M   
Sbjct: 263 IIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIK 322

Query: 438 GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYA 497
           G  P+  +Y+ ++   C         K+L E +S+ +  D  VY  LI  F K   V  A
Sbjct: 323 GLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTA 382

Query: 498 QRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSAS 557
            + F+ M    I  D + YT+L   + + G+     ++  +M  R L      Y +    
Sbjct: 383 NKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDV 442

Query: 558 YAKDNEILDLFWSH 571
           Y K  E+++ F  H
Sbjct: 443 YCKAGEMVNAFSLH 456


>gi|357450627|ref|XP_003595590.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
 gi|355484638|gb|AES65841.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
          Length = 859

 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 135/506 (26%), Positives = 248/506 (49%), Gaps = 11/506 (2%)

Query: 57  PSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTP--- 113
           PS   +FF  A        HSL S+  ++HILT  + F  A  +L +  L D   T    
Sbjct: 81  PSACLSFFHLATQNSHYRPHSL-SYSILLHILTHARLFPEATTVLRQ--LMDLHCTNNYR 137

Query: 114 --SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVL 171
             +V N +  ++ +    S V   L+  +A   MT+  L VFD+M     +P L +C+ L
Sbjct: 138 AYAVCNHVFSVYKEFGFCSGVFDMLMKAFAERGMTKHALYVFDEMSRIGRVPGLRSCSFL 197

Query: 172 LNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDV 231
           L  L +     +   V+ ++V  G+V ++++ +++++A C+   VD   ++L +M  + +
Sbjct: 198 LGKLVQKGEGRVAVMVFDQIVGTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGL 257

Query: 232 RADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARR 291
             ++ TYN L+  Y  +G       V   M   G+S ++VT   L+ G+C++G+M EA +
Sbjct: 258 EPNVVTYNGLVNGYVGRGDFEGVERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEK 317

Query: 292 LFRDIKG---ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
           L R+++       +   Y  L+DGYC+   +E+A+R+R+ M   G+   +V  N++++  
Sbjct: 318 LLREVEEDELLVVDERVYGVLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGY 377

Query: 349 CKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ 408
           CK G++ +A R+   M +  + PD  + NTL++ YC+ G  + A  +   ML  G+    
Sbjct: 378 CKLGQVCEAERVFVGMVDWNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTV 437

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
            TY  +I G       D A  L   M++ G +P+  S   ++D +    + +  + L  E
Sbjct: 438 VTYNTVIKGLVDVGSYDDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKE 497

Query: 469 FVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
            + RG       +  +I   CK  K+  A  +F+ M+  G+  D + Y +L+  Y + G 
Sbjct: 498 ILGRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGN 557

Query: 529 PKACSDILDDMYRRRLMITLKIYRSF 554
            +    I   M R+ +  ++++Y S 
Sbjct: 558 VQEAFQIKGVMERQAMSASIEMYNSL 583



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 90/328 (27%), Positives = 174/328 (53%), Gaps = 3/328 (0%)

Query: 179 RLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTY 238
           R+ D V ++  +M+++G+  N+ + N LI   CK   V + E++   M   +++ D ++Y
Sbjct: 347 RMEDAV-RIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWNLKPDCYSY 405

Query: 239 NTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI-- 296
           NTL+  YC++G   +A  + + M  +GI+P +VTYN++I G    G   +A  L+  +  
Sbjct: 406 NTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVE 465

Query: 297 KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRD 356
           +G TPN ++  T++D + +  D + A+ L + +  +G     V +N+++  LCK G++ +
Sbjct: 466 RGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLME 525

Query: 357 ANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIH 416
           A  + + M E  ++PD +T  TL + YCK G+   A ++K  M    +      Y +LI 
Sbjct: 526 AGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLID 585

Query: 417 GFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCV 476
           G  K ++++   +LL  M   G SP+  +Y  L+ G+C++   +    L  E + RG   
Sbjct: 586 GLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFTP 645

Query: 477 DVSVYRALIRRFCKKEKVDYAQRLFNLM 504
           +V V   ++    + +++  A  + + M
Sbjct: 646 NVVVCSKIVSSLYRDDRISEATVILDKM 673



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 113/400 (28%), Positives = 189/400 (47%), Gaps = 14/400 (3%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D L ++  M    + P+  +C  +L+   K   +D    ++K+++  G   +   +N +I
Sbjct: 455 DALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMI 514

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
              CK   + +   +   M+   +  D  TY TL   YCK G   EA  ++  MER+ +S
Sbjct: 515 SGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMS 574

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
             I  YNSLI G  +  ++ +   L  ++  +G +PN VTY TLI G+C    L++A  L
Sbjct: 575 ASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHL 634

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI------APDNVTCNTL 379
              M  +G  P VV  + I+  L ++ RI +A  +L++M +  I        D +  N L
Sbjct: 635 YFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVILDKMLDFDILAVHNKCSDKLVKNDL 694

Query: 380 INAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGF 439
                KI D+     + N +       +   Y   I G CK+ ++D A+ +L  ++  GF
Sbjct: 695 TLEAQKIADSLDKSDICNSLS------NNIVYNIAIDGLCKSGKLDEARSVLSVLMSRGF 748

Query: 440 SPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQR 499
            P   +Y  L+       N +   KL DE + +GL  ++++Y ALI   CK   +D AQR
Sbjct: 749 LPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGLIPNITIYNALINGLCKLGNIDRAQR 808

Query: 500 LFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
           LF  +   G++ ++V Y  L   Y R G+    S + + M
Sbjct: 809 LFYKLYQKGLVPNAVTYNILIGCYCRIGDLDKASRLREKM 848



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 69/255 (27%), Positives = 132/255 (51%), Gaps = 8/255 (3%)

Query: 155 QMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSS 214
           +M+   L P++     L++    ++  D  + +Y +M++ G   N+ + + ++ +  +  
Sbjct: 602 EMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDD 661

Query: 215 DVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI---V 271
            + +   +L +M   D+ A    +N       K  +  EA  + D +++  I   +   +
Sbjct: 662 RISEATVILDKMLDFDILA---VHNKCSDKLVKNDLTLEAQKIADSLDKSDICNSLSNNI 718

Query: 272 TYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
            YN  I G C+ G++ EAR +   +  +G  P++ TY TLI     + +++EA +LR+ M
Sbjct: 719 VYNIAIDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEM 778

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
             KG+ P +  YN+++  LCK G I  A RL  ++ +K + P+ VT N LI  YC+IGD 
Sbjct: 779 LEKGLIPNITIYNALINGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNILIGCYCRIGDL 838

Query: 390 ASAMKVKNRMLEAGL 404
             A +++ +M E G+
Sbjct: 839 DKASRLREKMTEEGI 853



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 81/326 (24%), Positives = 146/326 (44%), Gaps = 37/326 (11%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           VFD+M+   L P       L +   K+      +++   M +  + A+I +YN LI    
Sbjct: 529 VFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDGLF 588

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           K   ++ V  LL EM+ + +  ++ TY TLI+ +C +    +A  +   M   G +P++V
Sbjct: 589 KIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFTPNVV 648

Query: 272 TYNSLIHGFCREGRMREARRLF-------------------------------------R 294
             + ++    R+ R+ EA  +                                       
Sbjct: 649 VCSKIVSSLYRDDRISEATVILDKMLDFDILAVHNKCSDKLVKNDLTLEAQKIADSLDKS 708

Query: 295 DIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRI 354
           DI  +  N++ Y   IDG C++  L+EA  +  V+ ++G  P   TY +++      G +
Sbjct: 709 DICNSLSNNIVYNIAIDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNV 768

Query: 355 RDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKAL 414
            +A +L +EM EK + P+    N LIN  CK+G+   A ++  ++ + GL+ +  TY  L
Sbjct: 769 DEAFKLRDEMLEKGLIPNITIYNALINGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNIL 828

Query: 415 IHGFCKAKEMDIAKELLFGMLDAGFS 440
           I  +C+  ++D A  L   M + G S
Sbjct: 829 IGCYCRIGDLDKASRLREKMTEEGIS 854



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/197 (34%), Positives = 103/197 (52%), Gaps = 14/197 (7%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGV---VANIHLYN 204
           D +  FD + VHN       C+   + L K+ LT    K+   + +  +   ++N  +YN
Sbjct: 671 DKMLDFDILAVHN------KCS---DKLVKNDLTLEAQKIADSLDKSDICNSLSNNIVYN 721

Query: 205 VLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMERE 264
           + I   CKS  +D+   +L  +  +    D FTY TLI      G   EA  ++D M  +
Sbjct: 722 IAIDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEK 781

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEA 322
           G+ P+I  YN+LI+G C+ G +  A+RLF  +  KG  PN VTY  LI  YCR  DL++A
Sbjct: 782 GLIPNITIYNALINGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNILIGCYCRIGDLDKA 841

Query: 323 LRLREVMAAKGVYPGVV 339
            RLRE M  +G+   ++
Sbjct: 842 SRLREKMTEEGISTRII 858


>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Vitis vinifera]
 gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
          Length = 627

 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 128/441 (29%), Positives = 208/441 (47%), Gaps = 8/441 (1%)

Query: 132 VLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKM 191
            L+ L+  Y NL     GL V  +M      P+    T L+  L           + +KM
Sbjct: 129 TLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKM 188

Query: 192 VQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKD------VRADLFTYNTLIALY 245
           V++G   N+  Y  L++  C + +     KL  EM   +      ++ +L  Y T+I   
Sbjct: 189 VRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSL 248

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNH 303
           CK G+  +   +   M+  GISPD+V Y+S+IHG C  GR   A+ LF ++  +G  PN 
Sbjct: 249 CKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNV 308

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
           VT+  LID  C+A  +EEA  L ++M  +G  P   TYN+++   C EGRI DA  L   
Sbjct: 309 VTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVS 368

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
           M  K I  D V+ N LIN YCK G    A K+   M+   +M    TY  L+ G  +  +
Sbjct: 369 MESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGK 428

Query: 424 MDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRA 483
           +  A  L   M     +P  C+Y+ L+DG C  N+    ++L     +      + ++  
Sbjct: 429 VRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNC 488

Query: 484 LIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRR 543
           LI   CK  K++ A+ LFN +   G+  + + YT + +   ++G+ +   D+   M  + 
Sbjct: 489 LIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKG 548

Query: 544 LMITLKIYRSFSASYAKDNEI 564
               L  + +    + +++E+
Sbjct: 549 CAPNLVTFNTLMRGFCQNDEM 569



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 113/368 (30%), Positives = 185/368 (50%), Gaps = 37/368 (10%)

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
           P+L     +++SL KD L D   +++ +M   G+  ++  Y+ +IH  C +   +  + L
Sbjct: 236 PNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGL 295

Query: 223 LCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR 282
             EM  + V  ++ T+N LI   CK G   EA  +   M + G SPD  TYN+LI GFC 
Sbjct: 296 FNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCL 355

Query: 283 EGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVT 340
           EGR+ +AR LF  +  KG   + V+Y  LI+GYC++  + EA +L   M  K + P V+T
Sbjct: 356 EGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVIT 415

Query: 341 YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVK---- 396
           YN++L  L +EG++RDA  L  EM    + P++ T N L++  CK    + AM++     
Sbjct: 416 YNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLE 475

Query: 397 -------------------------------NRMLEAGLMLDQFTYKALIHGFCKAKEMD 425
                                          NR+   GL  +  TY  +IHG CK+ +++
Sbjct: 476 NHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLE 535

Query: 426 IAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
            AK+L  GM + G +P+  +++ L+ G+C  +  + +++LL E   +    D S    ++
Sbjct: 536 NAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVV 595

Query: 486 RRFCKKEK 493
               K EK
Sbjct: 596 DLLSKDEK 603



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 113/388 (29%), Positives = 191/388 (49%), Gaps = 8/388 (2%)

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQ----LGVV--ANIHLYNVLIHACCKSSDV 216
           P++     LLN L     T +  K++++M+      GV    N+  Y  +I + CK   +
Sbjct: 195 PNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLI 254

Query: 217 DKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSL 276
           DK ++L  EM+ + +  D+  Y+++I   C  G    A  + + M  EG+ P++VT+N L
Sbjct: 255 DKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVL 314

Query: 277 IHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGV 334
           I   C+ G+M EA  L + +  +G +P+  TY TLIDG+C    +++A  L   M +KG+
Sbjct: 315 IDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGI 374

Query: 335 YPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMK 394
               V+YN ++   CK GR+ +A +L  EM  K+I P  +T NTL+    + G    A  
Sbjct: 375 ETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWN 434

Query: 395 VKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYC 454
           +   M    L  +  TY  L+ G CK   +  A EL   + +  F PS   ++ L+DG C
Sbjct: 435 LFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLC 494

Query: 455 NKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSV 514
                E   +L +     GL  +V  Y  +I   CK  +++ A+ LF  M+  G   + V
Sbjct: 495 KARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLV 554

Query: 515 IYTSLAYAYWRAGEPKACSDILDDMYRR 542
            + +L   + +  E +   ++L +M  +
Sbjct: 555 TFNTLMRGFCQNDEMQKVVELLQEMAEK 582



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 114/381 (29%), Positives = 180/381 (47%), Gaps = 8/381 (2%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
            +   VF+ +      P + +   LL ++AK +    V  +YK+M  +G+  +    N+L
Sbjct: 74  SEAFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFITLNIL 133

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           I+  C  + VD    +L EM  +    +  T+ +L+   C      EA  +  +M R G 
Sbjct: 134 INCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGY 193

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDIK------GAT--PNHVTYTTLIDGYCRAND 318
            P++VTY +L++G C  G    A +L  ++       G T  PN V Y T+ID  C+   
Sbjct: 194 RPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGL 253

Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT 378
           +++   L   M  +G+ P VV Y+SI+  +C  GR   A  L NEM ++ + P+ VT N 
Sbjct: 254 IDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNV 313

Query: 379 LINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAG 438
           LI+A CK G    A  +   M++ G   D FTY  LI GFC    +D A++L   M   G
Sbjct: 314 LIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKG 373

Query: 439 FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQ 498
                 SY+ L++GYC         KL  E + + +   V  Y  L+    ++ KV  A 
Sbjct: 374 IETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAW 433

Query: 499 RLFNLMQGNGILGDSVIYTSL 519
            LF  M+ + +  +S  Y  L
Sbjct: 434 NLFGEMKVHDLTPESCTYNIL 454



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 116/401 (28%), Positives = 182/401 (45%), Gaps = 19/401 (4%)

Query: 75  KHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLS 134
           K +L  + T+I  L K+      + +  ++  R    +P V+     IH    G  H   
Sbjct: 235 KPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGI--SPDVVAYSSIIH----GMCHTGR 288

Query: 135 WLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQL 194
           W           +    +F++M    + P++    VL+++L K    +    + K M+Q 
Sbjct: 289 W-----------EGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQR 337

Query: 195 GVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEA 254
           G   +   YN LI   C    +D    L   ME K +  D  +YN LI  YCK G   EA
Sbjct: 338 GESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEA 397

Query: 255 LAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDG 312
             +   M  + I P ++TYN+L+ G  REG++R+A  LF ++K    TP   TY  L+DG
Sbjct: 398 KKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDG 457

Query: 313 YCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPD 372
            C+ N L EA+ L   +      P +  +N ++  LCK  +I  A  L N ++ + + P+
Sbjct: 458 LCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPN 517

Query: 373 NVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLF 432
            +T   +I+  CK G   +A  +   M E G   +  T+  L+ GFC+  EM    ELL 
Sbjct: 518 VITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQ 577

Query: 433 GMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
            M +  FSP   + S +VD           L LL  F ++G
Sbjct: 578 EMAEKDFSPDASTISIVVDLLSKDEKYREYLHLLPTFPAQG 618



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 101/366 (27%), Positives = 170/366 (46%), Gaps = 10/366 (2%)

Query: 211 CKSSDVDKVEKLLCEMEFKDVRA--DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISP 268
           CKS  + + E         D++    + ++NTL+    K   +++ +++  RM   G++P
Sbjct: 66  CKSGHIKRSEAFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAP 125

Query: 269 DIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLR 326
           D +T N LI+ +C   ++     +  ++  +G +PN VT+T+L+ G C  + + EA  L 
Sbjct: 126 DFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLL 185

Query: 327 EVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKK------IAPDNVTCNTLI 380
             M   G  P VVTY ++L  LC  G    A +L  EM          I P+ V   T+I
Sbjct: 186 RKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTII 245

Query: 381 NAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFS 440
           ++ CK G      ++   M   G+  D   Y ++IHG C     + AK L   M+D G  
Sbjct: 246 DSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVH 305

Query: 441 PSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRL 500
           P+  +++ L+D  C     E    LL   + RG   D   Y  LI  FC + ++D A+ L
Sbjct: 306 PNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDL 365

Query: 501 FNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAK 560
           F  M+  GI  D+V Y  L   Y ++G       +  +M  + +M T+  Y +      +
Sbjct: 366 FVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFR 425

Query: 561 DNEILD 566
           + ++ D
Sbjct: 426 EGKVRD 431


>gi|302816356|ref|XP_002989857.1| hypothetical protein SELMODRAFT_45144 [Selaginella moellendorffii]
 gi|300142423|gb|EFJ09124.1| hypothetical protein SELMODRAFT_45144 [Selaginella moellendorffii]
          Length = 394

 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 123/369 (33%), Positives = 182/369 (49%), Gaps = 1/369 (0%)

Query: 142 NLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIH 201
            L  T   LQ+F QM    + P     TV++  L K    D+    +++MVQ G + +  
Sbjct: 26  ELNFTNKALQIFHQMIDMKVKPDAFLYTVVIGHLCKINKLDLAASYFEQMVQSGCLPDKV 85

Query: 202 LYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRM 261
            Y VL+H+  K+   ++  ++  EM  K    +L TY T++  YCK G   +AL++  R+
Sbjct: 86  TYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRL 145

Query: 262 EREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEE 321
           +  G SP    Y++LI G C+  R  EAR LF    G   + + YT+ I G C+A  L+E
Sbjct: 146 KGTGRSPSGSLYSTLIDGLCKHDRHEEARELFEMAAGDVQDVIVYTSFISGLCKAGKLDE 205

Query: 322 ALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
           A  +   M   G  P  V+YN I+  LCK+ R+ +A  L+++  E+K  P    C  L++
Sbjct: 206 AKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVD 265

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQ-FTYKALIHGFCKAKEMDIAKELLFGMLDAGFS 440
             CK      A  +  RMLEAG       TY A+I G CKA  +D A  +L  M  AG  
Sbjct: 266 GLCKSRRVEEACVILERMLEAGDRAPSVVTYSAVIDGLCKADRLDDAYIVLQKMRRAGCV 325

Query: 441 PSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRL 500
           P   +Y+ ++D +C     +   +L      RG   DV  Y  LIR +C+  KVD A  +
Sbjct: 326 PDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCASDVVAYNILIRGYCRAAKVDEAIAM 385

Query: 501 FNLMQGNGI 509
              M G GI
Sbjct: 386 IEEMAGRGI 394



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 114/394 (28%), Positives = 195/394 (49%), Gaps = 5/394 (1%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           +  +M+   + P +     L+  L +   T+   +++ +M+ + V  +  LY V+I   C
Sbjct: 1   LLGEMKAAGITPTIVTFGSLIRKLCELNFTNKALQIFHQMIDMKVKPDAFLYTVVIGHLC 60

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           K + +D       +M       D  TY  L+    K     +   + + M  +G SP++V
Sbjct: 61  KINKLDLAASYFEQMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELV 120

Query: 272 TYNSLIHGFCREGRMREARRLFRDIKGA--TPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           TY ++++G+C+ GR+ +A  L R +KG   +P+   Y+TLIDG C+ +  EEA  L E+ 
Sbjct: 121 TYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHEEARELFEM- 179

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
            A G    V+ Y S +  LCK G++ +A  +  +M E   APD V+ N +I + CK    
Sbjct: 180 -AAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRV 238

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAG-FSPSYCSYSW 448
           + A ++ ++ +E   M        L+ G CK++ ++ A  +L  ML+AG  +PS  +YS 
Sbjct: 239 SEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLEAGDRAPSVVTYSA 298

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG 508
           ++DG C  +  +    +L +    G   DV  Y A+I  FCK  ++D A+ LF  M   G
Sbjct: 299 VIDGLCKADRLDDAYIVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERG 358

Query: 509 ILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRR 542
              D V Y  L   Y RA +      ++++M  R
Sbjct: 359 CASDVVAYNILIRGYCRAAKVDEAIAMIEEMAGR 392



 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 70/253 (27%), Positives = 113/253 (44%), Gaps = 2/253 (0%)

Query: 298 GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDA 357
           G TP  VT+ +LI   C  N   +AL++   M    V P    Y  ++  LCK  ++  A
Sbjct: 9   GITPTIVTFGSLIRKLCELNFTNKALQIFHQMIDMKVKPDAFLYTVVIGHLCKINKLDLA 68

Query: 358 NRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHG 417
                +M +    PD VT   L+++  K        ++   ML  G   +  TY  +++G
Sbjct: 69  ASYFEQMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYATVVNG 128

Query: 418 FCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVD 477
           +CKA  +D A  L+  +   G SPS   YS L+DG C  +  E   +L +  ++ G   D
Sbjct: 129 YCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHEEARELFE--MAAGDVQD 186

Query: 478 VSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILD 537
           V VY + I   CK  K+D A+ +   M   G   D V Y  + Y+  +        +++D
Sbjct: 187 VIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMD 246

Query: 538 DMYRRRLMITLKI 550
               R+ M  + +
Sbjct: 247 QAMERKCMPGVPV 259



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 59/135 (43%)

Query: 430 LLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFC 489
           LL  M  AG +P+  ++  L+   C  N     L++  + +   +  D  +Y  +I   C
Sbjct: 1   LLGEMKAAGITPTIVTFGSLIRKLCELNFTNKALQIFHQMIDMKVKPDAFLYTVVIGHLC 60

Query: 490 KKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLK 549
           K  K+D A   F  M  +G L D V YT L ++ ++A + +    I ++M  +     L 
Sbjct: 61  KINKLDLAASYFEQMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELV 120

Query: 550 IYRSFSASYAKDNEI 564
            Y +    Y K   I
Sbjct: 121 TYATVVNGYCKAGRI 135


>gi|357142605|ref|XP_003572629.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 543

 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 124/375 (33%), Positives = 193/375 (51%), Gaps = 17/375 (4%)

Query: 163 PHLHACTVLLNSLAKD-RLTDMVWKVYKKMVQ-LGVVANIHLYNVLIHACCKSSDVDKVE 220
           P +  C +L+  L  D R+ D      +++V+ LG  A I  YN +++  C++ ++D   
Sbjct: 94  PAVIPCNILIKKLCADGRVADA-----ERVVEALGPSATIITYNTMVNGYCRAGNIDAAR 148

Query: 221 KLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGF 280
           +++  + F     D FTYN LI   C +G   +ALAV D M   G SP +VTY+ L+   
Sbjct: 149 RMIDSVPFA---PDTFTYNPLIRALCVRGCVLDALAVFDDMLHRGCSPSVVTYSILLDAT 205

Query: 281 CREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGV 338
           C+E   ++A  L  ++  KG  P+ VTY  LI+  C   D+ EAL++   + + G  P  
Sbjct: 206 CKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAMCSQGDVGEALKVLNSLPSYGCKPDA 265

Query: 339 VTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNR 398
           VTY  +L+ LC   R  +A++LL +M     APD VT N +I + C+ G    A KV  +
Sbjct: 266 VTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTFNAVITSLCQKGFVGRATKVLAQ 325

Query: 399 MLEAGLMLDQFTYKALIHGFCKAKEMDIA----KELLFGMLDAGFSPSYCSYSWLVDGYC 454
           M E G   D  TY +++ G CK + +D A    KELL  M+     P   +++ ++   C
Sbjct: 326 MSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELLAEMVSKNCIPDQVTFNTIITSLC 385

Query: 455 NKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRF-CKKEKVDYAQRLFNLMQGNGILGDS 513
            K   +  +K++DE    G   D++ Y  ++  F CK  K + A  L NLM  NG+  D+
Sbjct: 386 QKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCKSCKTEEALDLLNLMVSNGLCPDT 445

Query: 514 VIYTSLAYAYWRAGE 528
             Y SLA+   R  E
Sbjct: 446 TTYKSLAFGLSREDE 460



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 110/340 (32%), Positives = 165/340 (48%), Gaps = 7/340 (2%)

Query: 187 VYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYC 246
           V+  M+  G   ++  Y++L+ A CK S   +   LL EM  K    D+ TYN LI   C
Sbjct: 182 VFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAMC 241

Query: 247 KKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHV 304
            +G   EAL V + +   G  PD VTY  ++   C   R  EA +L   +      P+ V
Sbjct: 242 SQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEV 301

Query: 305 TYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLN-- 362
           T+  +I   C+   +  A ++   M+  G  P ++TY+SI+  LCKE R+ +A +LL   
Sbjct: 302 TFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKEL 361

Query: 363 --EMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGF-C 419
             EM  K   PD VT NT+I + C+ G    A+KV + M E G + D  TY  ++ GF C
Sbjct: 362 LAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLC 421

Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
           K+ + + A +LL  M+  G  P   +Y  L  G   ++  E  + +     + GL  D  
Sbjct: 422 KSCKTEEALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRVQAMGLSPDKM 481

Query: 480 VYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
           +Y A++   CKK + D A   F  M  NG + D   Y  L
Sbjct: 482 LYNAILLGLCKKWRTDLAIDFFAYMVSNGCMPDESTYIIL 521



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 103/362 (28%), Positives = 178/362 (49%), Gaps = 7/362 (1%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D L VFD M      P +   ++LL++  K+        +  +M   G   +I  YNVLI
Sbjct: 178 DALAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLI 237

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           +A C   DV +  K+L  +     + D  TY  ++   C      EA  +  +M     +
Sbjct: 238 NAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCA 297

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALR- 324
           PD VT+N++I   C++G +  A ++   +   G TP+ +TY++++DG C+   ++EA++ 
Sbjct: 298 PDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKL 357

Query: 325 LREVMA---AKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
           L+E++A   +K   P  VT+N+I+  LC++G    A ++++EM+E    PD  T N +++
Sbjct: 358 LKELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVD 417

Query: 382 AY-CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFS 440
            + CK   T  A+ + N M+  GL  D  TYK+L  G  +  EM+ A  +   +   G S
Sbjct: 418 GFLCKSCKTEEALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRVQAMGLS 477

Query: 441 PSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRL 500
           P    Y+ ++ G C K   +  +      VS G   D S Y  L+     +  ++ A+ L
Sbjct: 478 PDKMLYNAILLGLCKKWRTDLAIDFFAYMVSNGCMPDESTYIILVEGIAYEGFLEEAKEL 537

Query: 501 FN 502
             
Sbjct: 538 LG 539



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 104/399 (26%), Positives = 187/399 (46%), Gaps = 24/399 (6%)

Query: 77  SLQSHWTMIHILTKNKHFKSAQNMLEKI--ALRDFLSTP---------SVLNALVKIHDD 125
           ++ ++ TM++   +  +  +A+ M++ +  A   F   P          VL+AL  + DD
Sbjct: 127 TIITYNTMVNGYCRAGNIDAARRMIDSVPFAPDTFTYNPLIRALCVRGCVLDALA-VFDD 185

Query: 126 ---PDGNSHVLSWLVIFYANLKMT--QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRL 180
                 +  V+++ ++  A  K +  +  + + D+MR     P +    VL+N++     
Sbjct: 186 MLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAMCSQGD 245

Query: 181 TDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNT 240
                KV   +   G   +   Y  ++ + C S   ++ +KLL +M   D   D  T+N 
Sbjct: 246 VGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTFNA 305

Query: 241 LIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI---- 296
           +I   C+KG    A  V  +M   G +PDI+TY+S++ G C+E R+ EA +L +++    
Sbjct: 306 VITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELLAEM 365

Query: 297 --KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRK-LCKEGR 353
             K   P+ VT+ T+I   C+    + A+++ + M+  G  P + TYN I+   LCK  +
Sbjct: 366 VSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCKSCK 425

Query: 354 IRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKA 413
             +A  LLN M    + PD  T  +L     +  +   A+ +  R+   GL  D+  Y A
Sbjct: 426 TEEALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRVQAMGLSPDKMLYNA 485

Query: 414 LIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
           ++ G CK    D+A +    M+  G  P   +Y  LV+G
Sbjct: 486 ILLGLCKKWRTDLAIDFFAYMVSNGCMPDESTYIILVEG 524



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 99/338 (29%), Positives = 154/338 (45%), Gaps = 12/338 (3%)

Query: 239 NTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKG 298
           N LI   C  G   +A  V   +E  G S  I+TYN++++G+CR G +  ARR+   +  
Sbjct: 100 NILIKKLCADGRVADAERV---VEALGPSATIITYNTMVNGYCRAGNIDAARRMIDSVPF 156

Query: 299 ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDAN 358
           A P+  TY  LI   C    + +AL + + M  +G  P VVTY+ +L   CKE   + A 
Sbjct: 157 A-PDTFTYNPLIRALCVRGCVLDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQAV 215

Query: 359 RLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGF 418
            LL+EM  K   PD VT N LINA C  GD   A+KV N +   G   D  TY  ++   
Sbjct: 216 VLLDEMRSKGCEPDIVTYNVLINAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSL 275

Query: 419 CKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDV 478
           C ++  + A +LL  M     +P   +++ ++   C K       K+L +    G   D+
Sbjct: 276 CSSERWEEADKLLTKMFSNDCAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDI 335

Query: 479 SVYRALIRRFCKKEKVDYA----QRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSD 534
             Y +++   CK+ +VD A    + L   M     + D V + ++  +  + G       
Sbjct: 336 ITYSSIMDGLCKERRVDEAIKLLKELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIK 395

Query: 535 ILDDMYRRRLMITLKIYR----SFSASYAKDNEILDLF 568
           ++D+M     +  +  Y      F     K  E LDL 
Sbjct: 396 VVDEMSEHGCIPDITTYNCIVDGFLCKSCKTEEALDLL 433



 Score =  108 bits (270), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 105/209 (50%), Gaps = 8/209 (3%)

Query: 312 GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAP 371
           G  +  +L+ ALRL   ++  G  P V+  N +++KLC +GR+ DA R++  +       
Sbjct: 70  GLVQRGELDGALRLVHSISGSGKDPAVIPCNILIKKLCADGRVADAERVVEALGPSATI- 128

Query: 372 DNVTCNTLINAYCKIGDTASAMKVKNRMLEA-GLMLDQFTYKALIHGFCKAKEMDIAKEL 430
             +T NT++N YC+ G+  +A     RM+++     D FTY  LI   C    +  A  +
Sbjct: 129 --ITYNTMVNGYCRAGNIDAA----RRMIDSVPFAPDTFTYNPLIRALCVRGCVLDALAV 182

Query: 431 LFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCK 490
              ML  G SPS  +YS L+D  C ++  +  + LLDE  S+G   D+  Y  LI   C 
Sbjct: 183 FDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAMCS 242

Query: 491 KEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
           +  V  A ++ N +   G   D+V YT +
Sbjct: 243 QGDVGEALKVLNSLPSYGCKPDAVTYTPV 271


>gi|224141281|ref|XP_002324003.1| predicted protein [Populus trichocarpa]
 gi|222867005|gb|EEF04136.1| predicted protein [Populus trichocarpa]
          Length = 626

 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 139/494 (28%), Positives = 237/494 (47%), Gaps = 8/494 (1%)

Query: 38  LTSTAIHKVLLNLYNCCHIPSLSC-AFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKS 96
           L +  I +VLL     C   S+S   FF W ++ +   K S  ++  ++H+L  +K F+ 
Sbjct: 94  LGANEISRVLLR----CQSDSVSALTFFNWVKNDL-GLKPSTLNYCLILHVLAWSKEFEQ 148

Query: 97  AQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQM 156
           A   L ++ L    +   V   L     D + +  +   L+  Y    M ++G + F Q+
Sbjct: 149 AMKFLTELILLVKDTDEDVFQCLFLCCQDCNWDPIIFDLLLKAYVKAGMIKEGFRTFMQI 208

Query: 157 RVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDV 216
                +P + AC  LLN L K     + W VY +M ++GV+ N + +N+L H  CK  D+
Sbjct: 209 LEVGYVPSVIACNYLLNGLLKSNHIHLCWHVYGEMGRVGVIPNSYTFNILTHLFCKDGDI 268

Query: 217 DKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSL 276
           DK+   L +ME +    D+ TYNTLI  YC +G   +A  +   M R  + PD+V+Y +L
Sbjct: 269 DKMNDFLEKMEEEGFEPDIVTYNTLINGYCGRGRLSDAFYLYRIMYRRCVLPDLVSYTAL 328

Query: 277 IHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGV 334
           ++G C+EGR+REA +L   +  +G  P+ V+Y TLI GYC+   + E+  L   M   G+
Sbjct: 329 MNGLCKEGRVREAHQLLHRMVHRGLNPDVVSYNTLICGYCKEGKMLESKSLLYEMIGNGI 388

Query: 335 YPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMK 394
           +P   T   +++   KEG +  A  L+ E+ +  ++      + L+ + C+     +A  
Sbjct: 389 FPDSFTCRVLIQGYRKEGWLISALNLVVELEKFGVSISPDIYDYLVASLCEEDRPFAAKT 448

Query: 395 VKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYC 454
           +  RM + G +     Y  LI   CK   +  A  L   ++    +P+  +Y  L+   C
Sbjct: 449 LLERMSQRGYIPHVEIYNKLIESLCKGDCVADALSLKAEIVVGNINPNLLTYKALIRCLC 508

Query: 455 NKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSV 514
                    KL++E +  GL  D  + RA+I  +C+++    A+ L  L      + DS 
Sbjct: 509 RMGRSIEAEKLMEEMLHFGLQPDPEICRAMIHGYCREKDAGKAESLLVLFAKEFQIFDSE 568

Query: 515 IYTSLAYAYWRAGE 528
            Y++L       G+
Sbjct: 569 SYSTLVRIVCEDGD 582



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 135/534 (25%), Positives = 230/534 (43%), Gaps = 64/534 (11%)

Query: 86  HILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKM 145
           H LTKN    S+ + L+ I   + +S  + L + +  + +P+      +++ + Y++LK 
Sbjct: 22  HTLTKNL-VPSSSSSLQTIQNSNSISLSNPLYSFLPENQNPN------NFVNLIYSSLKR 74

Query: 146 TQDGLQVFDQMRVHNLMPHLHACTV--LLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLY 203
               L +     +  L+ HL A  +  +L     D ++ + +  + K   LG+  +   Y
Sbjct: 75  DNTQLTLLQNDDIKGLIHHLGANEISRVLLRCQSDSVSALTFFNWVKN-DLGLKPSTLNY 133

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEF--KDVRADLFT---------------YNTLIALYC 246
            +++H    S + ++  K L E+    KD   D+F                ++ L+  Y 
Sbjct: 134 CLILHVLAWSKEFEQAMKFLTELILLVKDTDEDVFQCLFLCCQDCNWDPIIFDLLLKAYV 193

Query: 247 KKGMHYEALA-----------------------------------VQDRMEREGISPDIV 271
           K GM  E                                      V   M R G+ P+  
Sbjct: 194 KAGMIKEGFRTFMQILEVGYVPSVIACNYLLNGLLKSNHIHLCWHVYGEMGRVGVIPNSY 253

Query: 272 TYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           T+N L H FC++G + +       ++  G  P+ VTY TLI+GYC    L +A  L  +M
Sbjct: 254 TFNILTHLFCKDGDIDKMNDFLEKMEEEGFEPDIVTYNTLINGYCGRGRLSDAFYLYRIM 313

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
             + V P +V+Y +++  LCKEGR+R+A++LL+ M  + + PD V+ NTLI  YCK G  
Sbjct: 314 YRRCVLPDLVSYTALMNGLCKEGRVREAHQLLHRMVHRGLNPDVVSYNTLICGYCKEGKM 373

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
             +  +   M+  G+  D FT + LI G+ K   +  A  L+  +   G S S   Y +L
Sbjct: 374 LESKSLLYEMIGNGIFPDSFTCRVLIQGYRKEGWLISALNLVVELEKFGVSISPDIYDYL 433

Query: 450 VDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGI 509
           V   C ++   A   LL+    RG    V +Y  LI   CK + V  A  L   +    I
Sbjct: 434 VASLCEEDRPFAAKTLLERMSQRGYIPHVEIYNKLIESLCKGDCVADALSLKAEIVVGNI 493

Query: 510 LGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNE 563
             + + Y +L     R G       ++++M    L    +I R+    Y ++ +
Sbjct: 494 NPNLLTYKALIRCLCRMGRSIEAEKLMEEMLHFGLQPDPEICRAMIHGYCREKD 547



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 98/373 (26%), Positives = 170/373 (45%), Gaps = 23/373 (6%)

Query: 84  MIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANL 143
           + H+  K+       + LEK+    F               +PD  ++  + L+  Y   
Sbjct: 258 LTHLFCKDGDIDKMNDFLEKMEEEGF---------------EPDIVTY--NTLINGYCGR 300

Query: 144 KMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLY 203
               D   ++  M    ++P L + T L+N L K+       ++  +MV  G+  ++  Y
Sbjct: 301 GRLSDAFYLYRIMYRRCVLPDLVSYTALMNGLCKEGRVREAHQLLHRMVHRGLNPDVVSY 360

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER 263
           N LI   CK   + + + LL EM    +  D FT   LI  Y K+G    AL +   +E+
Sbjct: 361 NTLICGYCKEGKMLESKSLLYEMIGNGIFPDSFTCRVLIQGYRKEGWLISALNLVVELEK 420

Query: 264 EG--ISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDL 319
            G  ISPDI  Y+ L+   C E R   A+ L   +  +G  P+   Y  LI+  C+ + +
Sbjct: 421 FGVSISPDI--YDYLVASLCEEDRPFAAKTLLERMSQRGYIPHVEIYNKLIESLCKGDCV 478

Query: 320 EEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTL 379
            +AL L+  +    + P ++TY +++R LC+ GR  +A +L+ EM    + PD   C  +
Sbjct: 479 ADALSLKAEIVVGNINPNLLTYKALIRCLCRMGRSIEAEKLMEEMLHFGLQPDPEICRAM 538

Query: 380 INAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGF 439
           I+ YC+  D   A  +     +   + D  +Y  L+   C+  ++    EL   ML  GF
Sbjct: 539 IHGYCREKDAGKAESLLVLFAKEFQIFDSESYSTLVRIVCEDGDVAKFMELQERMLKVGF 598

Query: 440 SPSYCSYSWLVDG 452
           +P+  +  +++DG
Sbjct: 599 APNSLTCKYMIDG 611


>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 746

 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 117/371 (31%), Positives = 192/371 (51%), Gaps = 2/371 (0%)

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
           K+  +M   G+ +N  +Y  +I   C    V    ++L +M    V  D   + T+I+ +
Sbjct: 308 KLLDEMAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGF 367

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNH 303
           C KG    A  + + M++ G++ D VT+ +LI+G CR G ++EA R+ +++  KG   + 
Sbjct: 368 CSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDV 427

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
           VTYT LIDGYC+  ++ EA R+   M  + V P VVTY ++   LCK+G +R AN LL+E
Sbjct: 428 VTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHE 487

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
           M  K +  +  T N+LIN  CK G+   AM++   M  AG   D +TY  LI   CK+ E
Sbjct: 488 MCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGE 547

Query: 424 MDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRA 483
            D A  +L  MLD G  PS  +Y+ L++G+C     E   KLL+  + + +  +V  Y +
Sbjct: 548 FDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNS 607

Query: 484 LIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRR 543
           L++++C  + +     ++  M    +  +   Y  L   + +A   K       +M  + 
Sbjct: 608 LMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKG 667

Query: 544 LMITLKIYRSF 554
           L +T   Y + 
Sbjct: 668 LRLTASSYSAL 678



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 122/440 (27%), Positives = 216/440 (49%), Gaps = 19/440 (4%)

Query: 80  SHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIF 139
           ++ TM+H        ++A  +L+++A +                   + N+ V + ++  
Sbjct: 289 TYGTMVHGYCVRGELENAVKLLDEMAAKGL-----------------ESNATVYTSVIAL 331

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
             N     D L+V + M +H +       T +++            +++++M + G+ A+
Sbjct: 332 LCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAAD 391

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
              +  LI+  C++ ++ + +++L EM  K +  D+ TY  LI  YCK+G   EA  V +
Sbjct: 392 RVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHN 451

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRAN 317
            M    ++P++VTY +L  G C++G +R A  L  ++  KG   N  TY +LI+G C+  
Sbjct: 452 EMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFG 511

Query: 318 DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCN 377
           +LE+A+R+   M A G    V TY +++  LCK G    A+ +L EM +K I P   T N
Sbjct: 512 NLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYN 571

Query: 378 TLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA 437
            L+N +C  G      K+   MLE  +  +  TY +L+  +C  K M    E+  GM   
Sbjct: 572 VLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQ 631

Query: 438 GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYA 497
             +P+  +Y+ L+ G+C   N +  L    E + +GL +  S Y ALIR   KK+K   A
Sbjct: 632 EVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSALIRLLNKKKKFSEA 691

Query: 498 QRLFNLMQGNGILGDSVIYT 517
           +  F+ M+  G+  +  +Y+
Sbjct: 692 RVFFDKMRNEGLTAEPDVYS 711



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 96/304 (31%), Positives = 154/304 (50%), Gaps = 2/304 (0%)

Query: 169 TVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEF 228
           TVL++   K       ++V+ +MV   V  N+  Y  L    CK  DV    +LL EM  
Sbjct: 431 TVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCN 490

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
           K +  +++TYN+LI   CK G   +A+ +   ME  G   D+ TY +LI   C+ G    
Sbjct: 491 KGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDR 550

Query: 289 ARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILR 346
           A  + +++  KG  P+  TY  L++G+C +  +E   +L E M  K V P VVTYNS+++
Sbjct: 551 AHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMK 610

Query: 347 KLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLML 406
           + C +  ++    +   M+ +++AP+  T N LI  +CK  +   A+     M+E GL L
Sbjct: 611 QYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRL 670

Query: 407 DQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLL 466
              +Y ALI    K K+   A+     M + G +     YS+ +D   N++N E+ + L 
Sbjct: 671 TASSYSALIRLLNKKKKFSEARVFFDKMRNEGLTAEPDVYSFYMDISFNEDNLESTITLC 730

Query: 467 DEFV 470
           DE V
Sbjct: 731 DELV 734



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 53/222 (23%), Positives = 95/222 (42%), Gaps = 19/222 (8%)

Query: 54  CHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTP 113
           C   +L  A     E     ++  + ++ T+I  L K+  F  A NML+++  +    + 
Sbjct: 508 CKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSI 567

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           +  N L+        N   +S  V         + G ++ + M   N+ P++     L+ 
Sbjct: 568 ATYNVLM--------NGFCMSGRV---------EGGKKLLEWMLEKNVRPNVVTYNSLMK 610

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
               D+      ++YK M    V  N + YN+LI   CK+ ++ +      EM  K +R 
Sbjct: 611 QYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRL 670

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS--PDIVTY 273
              +Y+ LI L  KK    EA    D+M  EG++  PD+ ++
Sbjct: 671 TASSYSALIRLLNKKKKFSEARVFFDKMRNEGLTAEPDVYSF 712


>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
          Length = 425

 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 115/392 (29%), Positives = 207/392 (52%), Gaps = 2/392 (0%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           + + D+M      P L    V++N L K   TD+ + +  KM Q  +   + +YN +I  
Sbjct: 1   MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 60

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
            CK   +D    L  EME K +R ++ TY++LI+  C  G   +A  +   M    I+PD
Sbjct: 61  LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 120

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLRE 327
           + T+++LI  F +EG++ EA +L+ ++  +   P+ VTY++LI+G+C  + L+EA ++ E
Sbjct: 121 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 180

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
            M +K  +P VVTYN++++  CK  R+ +   +  EM+++ +  + VT N LI    + G
Sbjct: 181 FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAG 240

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
           D   A ++   M+  G+  +  TY  L+ G CK  +++ A  +   +  +   P+  +Y+
Sbjct: 241 DCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYN 300

Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGN 507
            +++G C     E    L      +G+  DV  Y  +I  FC+K   + A  LF  M+ +
Sbjct: 301 IMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKED 360

Query: 508 GILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
           G L +S  Y +L  A  R G+ +A ++++ +M
Sbjct: 361 GTLPNSGCYNTLIRARLRDGDREASAELIKEM 392



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 106/370 (28%), Positives = 180/370 (48%), Gaps = 2/370 (0%)

Query: 146 TQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNV 205
           T     + ++M    L P +     +++ L K +  D    ++K+M   G+  N+  Y+ 
Sbjct: 32  TDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSS 91

Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
           LI   C         +LL +M  + +  D+FT++ LI  + K+G   EA  + D M +  
Sbjct: 92  LISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRS 151

Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEAL 323
           I P IVTY+SLI+GFC   R+ EA+++F  +  K   P+ VTY TLI G+C+   +EE +
Sbjct: 152 IDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGM 211

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
            +   M+ +G+    VTYN +++ L + G    A  +  EM    + P+ +T NTL++  
Sbjct: 212 EVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGL 271

Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY 443
           CK G    AM V   +  + +    +TY  +I G CKA +++   +L   +   G  P  
Sbjct: 272 CKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDV 331

Query: 444 CSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNL 503
            +Y+ ++ G+C K ++E    L  E    G   +   Y  LIR   +    + +  L   
Sbjct: 332 VAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKE 391

Query: 504 MQGNGILGDS 513
           M+  G  GD+
Sbjct: 392 MRSCGFAGDA 401



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 96/314 (30%), Positives = 162/314 (51%), Gaps = 2/314 (0%)

Query: 255 LAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGA--TPNHVTYTTLIDG 312
           +A+ DRM  +G  PD+VTY  +++G C+ G    A  L   ++     P  + Y T+IDG
Sbjct: 1   MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 60

Query: 313 YCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPD 372
            C+   +++AL L + M  KG+ P VVTY+S++  LC  GR  DA+RLL++M E+KI PD
Sbjct: 61  LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 120

Query: 373 NVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLF 432
             T + LI+A+ K G    A K+ + M++  +     TY +LI+GFC    +D AK++  
Sbjct: 121 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 180

Query: 433 GMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKE 492
            M+     P   +Y+ L+ G+C     E  +++  E   RGL  +   Y  LI+   +  
Sbjct: 181 FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAG 240

Query: 493 KVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYR 552
             D AQ +F  M  +G+  + + Y +L     + G+ +    + + + R ++  T+  Y 
Sbjct: 241 DCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYN 300

Query: 553 SFSASYAKDNEILD 566
                  K  ++ D
Sbjct: 301 IMIEGMCKAGKVED 314



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 97/360 (26%), Positives = 169/360 (46%), Gaps = 19/360 (5%)

Query: 83  TMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYAN 142
           T+I  L K KH   A N+ +++  +     P+V+                 S L+    N
Sbjct: 56  TIIDGLCKYKHMDDALNLFKEMETKGI--RPNVV---------------TYSSLISCLCN 98

Query: 143 LKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHL 202
                D  ++   M    + P +   + L+++  K+       K+Y +MV+  +  +I  
Sbjct: 99  YGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVT 158

Query: 203 YNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRME 262
           Y+ LI+  C    +D+ +++   M  K    D+ TYNTLI  +CK     E + V   M 
Sbjct: 159 YSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMS 218

Query: 263 REGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLE 320
           + G+  + VTYN LI G  + G    A+ +F+++   G  PN +TY TL+DG C+   LE
Sbjct: 219 QRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLE 278

Query: 321 EALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLI 380
           +A+ + E +    + P + TYN ++  +CK G++ D   L   ++ K + PD V  NT+I
Sbjct: 279 KAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMI 338

Query: 381 NAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFS 440
           + +C+ G    A  +   M E G + +   Y  LI    +  + + + EL+  M   GF+
Sbjct: 339 SGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFA 398



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 117/233 (50%), Gaps = 2/233 (0%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           Q+F+ M   +  P +     L+    K +  +   +V+++M Q G+V N   YN+LI   
Sbjct: 177 QMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGL 236

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
            ++ D D  +++  EM    V  ++ TYNTL+   CK G   +A+ V + ++R  + P I
Sbjct: 237 FQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTI 296

Query: 271 VTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
            TYN +I G C+ G++ +   LF ++  KG  P+ V Y T+I G+CR    EEA  L + 
Sbjct: 297 YTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKE 356

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
           M   G  P    YN+++R   ++G    +  L+ EM     A D  T   + N
Sbjct: 357 MKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTN 409



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 68/238 (28%), Positives = 121/238 (50%), Gaps = 5/238 (2%)

Query: 119 LVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKD 178
           +V  H  PD  ++  + L+  +   K  ++G++VF +M    L+ +     +L+  L + 
Sbjct: 182 MVSKHCFPDVVTY--NTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQA 239

Query: 179 RLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTY 238
              DM  +++K+MV  GV  NI  YN L+   CK+  ++K   +   ++   +   ++TY
Sbjct: 240 GDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTY 299

Query: 239 NTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK- 297
           N +I   CK G   +   +   +  +G+ PD+V YN++I GFCR+G   EA  LF+++K 
Sbjct: 300 NIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKE 359

Query: 298 -GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRI 354
            G  PN   Y TLI    R  D E +  L + M + G + G  +   ++  +  +GR+
Sbjct: 360 DGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCG-FAGDASTIGLVTNMLHDGRL 416


>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
 gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
          Length = 757

 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 144/508 (28%), Positives = 247/508 (48%), Gaps = 26/508 (5%)

Query: 63  FFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKI 122
            F WA S  PN+K S      ++H L K   F + +++L+++ +           +L  I
Sbjct: 75  LFYWA-SKQPNFKPSSSIFKEVLHKLGKAGEFDAMKDILKEMKI-----------SLSVI 122

Query: 123 HDDPDGNSHVLSWLVIF--YANLKMTQDGLQVFDQMRVH-NLMPHLHACTVLLNSLAKDR 179
            +D        S LV    YA+  +  + LQ  D M V   ++ + H    LLN L    
Sbjct: 123 DND--------SLLVFIESYASFGLYNEILQFVDAMEVEFGVVANTHFYNFLLNVLVDGN 174

Query: 180 LTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYN 239
              +V   +  MV  G+  ++  +N+LI A C++  +     L+ EME   +  D  T+ 
Sbjct: 175 KLKLVEIAHSNMVSRGIRPDVSTFNILIKALCRAHQIRPAILLMEEMEDFGLLPDEKTFT 234

Query: 240 TLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--- 296
           T++  + ++G    A+ V+++M   G     VT N L++GFC+EGR+ EA R   ++   
Sbjct: 235 TIMQGFIEEGNLDGAMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLR 294

Query: 297 KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRD 356
           +G  P+  T+  L++G  +   ++ AL + ++M  +G  P + TYNS++  LCK G + +
Sbjct: 295 EGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDE 354

Query: 357 ANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIH 416
           A ++LN+M E+  +P+ VT NT+I+  CK      A K+   +   G++ D  TY +LI 
Sbjct: 355 AVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQ 414

Query: 417 GFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCV 476
           G C ++   +A EL   M   G  P   +Y+ L+D  C +   +  L LL E    G   
Sbjct: 415 GLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCAR 474

Query: 477 DVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDIL 536
           +V  Y  LI  FCK +++  A+ +F+ M+  G+  +SV Y +L     ++   +  S ++
Sbjct: 475 NVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLM 534

Query: 537 DDMYRRRLMITLKIYRSFSASYAKDNEI 564
           D M    L      Y S    + K  +I
Sbjct: 535 DQMIMEGLRPDKFTYNSLLTYFCKAGDI 562



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 128/403 (31%), Positives = 199/403 (49%), Gaps = 3/403 (0%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           + ++M    L+P     T ++    ++   D   +V ++MV+ G V      NVL++  C
Sbjct: 217 LMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVTNVTVNVLVNGFC 276

Query: 212 KSSDVDKVEKLLCEMEFKD-VRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           K   +++  + + EM  ++    D +T+N L+    K G    AL V D M REG  PDI
Sbjct: 277 KEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDI 336

Query: 271 VTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
            TYNSLI G C+ G + EA ++   +  +  +PN VTY T+I   C+ N +EEA +L  V
Sbjct: 337 YTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALV 396

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           +  KG+ P V TYNS+++ LC       A  L  EM  K   PD  T N LI++ C  G 
Sbjct: 397 LTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGK 456

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
              A+ +   M  +G   +  TY  LI GFCK K +  A+E+   M   G S +  +Y+ 
Sbjct: 457 LQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNT 516

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG 508
           L+DG C     E   +L+D+ +  GL  D   Y +L+  FCK   +  A  +   M  +G
Sbjct: 517 LIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDG 576

Query: 509 ILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIY 551
              D V Y +L     +AG  +A + +L  +  + + +T   Y
Sbjct: 577 CEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAY 619



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 119/386 (30%), Positives = 195/386 (50%), Gaps = 3/386 (0%)

Query: 147 QDGLQVFDQMRV-HNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNV 205
           ++ L+  ++M +     P  +   +L+N L+K        +V   M++ G   +I+ YN 
Sbjct: 282 EEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNS 341

Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
           LI   CK  +VD+  K+L +M  +D   +  TYNT+I+  CK+    EA  +   +  +G
Sbjct: 342 LISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKG 401

Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEAL 323
           I PD+ TYNSLI G C       A  L++++K  G  P+  TY  LID  C    L+EAL
Sbjct: 402 ILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEAL 461

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
            L + M   G    V+TYN+++   CK  RI +A  + ++M  + ++ ++VT NTLI+  
Sbjct: 462 NLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGL 521

Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY 443
           CK      A ++ ++M+  GL  D+FTY +L+  FCKA ++  A +++  M   G  P  
Sbjct: 522 CKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDI 581

Query: 444 CSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNL 503
            +Y  L+ G C     EA  KLL     +G+ +    Y  +I+   ++++   A RLF  
Sbjct: 582 VTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFRE 641

Query: 504 MQGNGILGDSVIYTSLAYAYWRAGEP 529
           M       D+V Y  +     + G P
Sbjct: 642 MIEKAEAPDAVTYKIVFRGLCQGGGP 667



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 119/417 (28%), Positives = 192/417 (46%), Gaps = 42/417 (10%)

Query: 115 VLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNS 174
           V++ +++   DPD   +  + L+     L    + ++V +QM   +  P+      ++++
Sbjct: 323 VMDMMLREGFDPD--IYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIIST 380

Query: 175 LAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRAD 234
           L K+   +   K+   +   G++ ++  YN LI   C S +     +L  EM+ K    D
Sbjct: 381 LCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPD 440

Query: 235 LFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF- 293
            FTYN LI   C +G   EAL +   ME  G + +++TYN+LI GFC+  R+ EA  +F 
Sbjct: 441 EFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFD 500

Query: 294 -RDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEG 352
             +++G + N VTY TLIDG C++  +EEA +L + M  +G+ P   TYNS+L   CK G
Sbjct: 501 QMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAG 560

Query: 353 RIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKN--------------- 397
            I+ A  ++  M      PD VT  TLI   CK G   +A K+                 
Sbjct: 561 DIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYN 620

Query: 398 --------------------RMLEAGLMLDQFTYKALIHGFCKAK-EMDIAKELLFGMLD 436
                                M+E     D  TYK +  G C+    +  A + +  ML+
Sbjct: 621 PVIQALFRRKRSKEAVRLFREMIEKAEAPDAVTYKIVFRGLCQGGGPIGEAVDFVMEMLE 680

Query: 437 AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEK 493
            G+ P + S+  L +G  +      L+KL+D  + +    D  V   +IR F K  K
Sbjct: 681 RGYVPEFSSFYMLAEGLFSLAMVGTLIKLIDMVMEKAKFSDNEV--TMIRGFLKISK 735



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 66/262 (25%), Positives = 116/262 (44%), Gaps = 5/262 (1%)

Query: 144 KMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLY 203
           K   +  ++FDQM +  +  +      L++ L K    +   ++  +M+  G+  +   Y
Sbjct: 490 KRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTY 549

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER 263
           N L+   CK+ D+ K   ++  M       D+ TY TLIA  CK G    A  +   ++ 
Sbjct: 550 NSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQM 609

Query: 264 EGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRAND-LE 320
           +GI+     YN +I    R  R +EA RLFR++  K   P+ VTY  +  G C+    + 
Sbjct: 610 KGINLTPHAYNPVIQALFRRKRSKEAVRLFREMIEKAEAPDAVTYKIVFRGLCQGGGPIG 669

Query: 321 EALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLI 380
           EA+     M  +G  P   ++  +   L     +    +L++ + EK    DN    T+I
Sbjct: 670 EAVDFVMEMLERGYVPEFSSFYMLAEGLFSLAMVGTLIKLIDMVMEKAKFSDNEV--TMI 727

Query: 381 NAYCKIGDTASAMKVKNRMLEA 402
             + KI     A+     +L++
Sbjct: 728 RGFLKISKYQDALATLGGILDS 749


>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
 gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
          Length = 593

 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 125/445 (28%), Positives = 223/445 (50%), Gaps = 8/445 (1%)

Query: 132 VLSWLVIFYANLKMTQ---DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           ++ +  +  A +KM Q     + +  QM +  L P+++  ++L+N  +  +  D+ + V 
Sbjct: 97  IIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTLSILINCFSHLQRVDLAFSVL 156

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
            K+++LG+   I  +  LI+  CK     +  +L  +M  +  R D++TY T+I   CK 
Sbjct: 157 AKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKI 216

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR--DIKGATPNHVTY 306
           G    A  +  +ME  G  P++VTY+++I    ++ R+ EA  +F    +KG +P+  TY
Sbjct: 217 GETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTY 276

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
            +LI G C  +  +EA  L   M +  + P +VT+N ++  +CKEG++ +A  +L  M E
Sbjct: 277 NSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTE 336

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
             + PD VT ++L+  Y    +   A K+ + M+  G   D F+Y  LI+G+CK K +D 
Sbjct: 337 MGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDE 396

Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
           AK+L   M+  G +P+  SY+ L+ G C   +      L     + G   ++  Y  L+ 
Sbjct: 397 AKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLD 456

Query: 487 RFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMI 546
            FCK+     A RLF  MQ      + V+Y  L  A  ++G  +    +  +++ + L  
Sbjct: 457 GFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQP 516

Query: 547 TLKIYRSFSASYAKD---NEILDLF 568
             +IY +      K+   +E L+ F
Sbjct: 517 NAQIYTTIINGLCKEGLLDEALEAF 541



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 125/430 (29%), Positives = 207/430 (48%), Gaps = 8/430 (1%)

Query: 114 SVLNALVKIHDDPD--GNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVL 171
           SVL  ++K+   P     + +++WL      +      +++FD M      P ++  T +
Sbjct: 154 SVLAKIIKLGLQPTIVTFTTLINWL----CKVGKFAQAMELFDDMVARGCRPDVYTYTTI 209

Query: 172 LNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDV 231
           +N L K   T     + KKM + G   N+  Y+ +I +  K   V++   +   M+ K +
Sbjct: 210 INGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGI 269

Query: 232 RADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARR 291
             D+FTYN+LI   C      EA A+ + M    I PDIVT+N L+   C+EG++ EA+ 
Sbjct: 270 SPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQG 329

Query: 292 LFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLC 349
           + + +   G  P+ VTY++L+ GY   +++ EA +L + M  KG  P V +YN ++   C
Sbjct: 330 VLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYC 389

Query: 350 KEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQF 409
           K  RI +A +L NEM  + + P+NV+ NTLI+  C++G    A  +   M   G + + F
Sbjct: 390 KVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLF 449

Query: 410 TYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEF 469
           TY  L+ GFCK      A  L   M      P+   Y+ L+D  C   N     KL  E 
Sbjct: 450 TYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSEL 509

Query: 470 VSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEP 529
             +GL  +  +Y  +I   CK+  +D A   F  M+ +G   D + Y  +   +    + 
Sbjct: 510 FVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVIIRGFLHHKDE 569

Query: 530 KACSDILDDM 539
                ++ +M
Sbjct: 570 SRAVQLIGEM 579



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 125/421 (29%), Positives = 210/421 (49%), Gaps = 18/421 (4%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAK-DRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           D L  F+ M     +P +   T LL+++ K  +  D V  + K+M   G+  NI+  ++L
Sbjct: 80  DALASFNHMLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTLSIL 139

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           I+       VD    +L ++    ++  + T+ TLI   CK G   +A+ + D M   G 
Sbjct: 140 INCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGC 199

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALR 324
            PD+ TY ++I+G C+ G    A  L + ++  G  PN VTY+T+ID + +   + EAL 
Sbjct: 200 RPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALD 259

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           +   M  KG+ P + TYNS+++ LC   + ++A+ LLNEM    I PD VT N L++  C
Sbjct: 260 IFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTIC 319

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           K G  + A  V   M E G+  D  TY +L++G+    E+  A++L   M+  G  P   
Sbjct: 320 KEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVF 379

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
           SY+ L++GYC     +   +L +E + +GL  +   Y  LI   C+   +  A+ LF  M
Sbjct: 380 SYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNM 439

Query: 505 QGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
             NG L +   Y+ L   + + G            Y  +     +++R+  ++Y+K N +
Sbjct: 440 HTNGNLPNLFTYSILLDGFCKQG------------YFGK---AFRLFRAMQSTYSKPNLV 484

Query: 565 L 565
           +
Sbjct: 485 M 485



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 134/501 (26%), Positives = 231/501 (46%), Gaps = 41/501 (8%)

Query: 12  KFIKTISAIMLKGHWAKL------------LNPNIASSLTSTAIHKVLLNLYNCCHIPSL 59
           +F K +SAI+  G +               L+PNI +         +L+N ++  H+  +
Sbjct: 99  QFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYT-------LSILINCFS--HLQRV 149

Query: 60  SCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALR----DFLSTPSV 115
             AF   A+      + ++ +  T+I+ L K   F  A  + + +  R    D  +  ++
Sbjct: 150 DLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTI 209

Query: 116 LNALVKIHD------------DPDGNSHVLSWLVIFYANLK--MTQDGLQVFDQMRVHNL 161
           +N L KI +            +     +V+++  I  ++ K     + L +F  M+V  +
Sbjct: 210 INGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGI 269

Query: 162 MPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEK 221
            P +     L+  L           +  +M  L ++ +I  +NVL+   CK   V + + 
Sbjct: 270 SPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQG 329

Query: 222 LLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFC 281
           +L  M    V  D+ TY++L+  Y  +    EA  + D M  +G  PD+ +YN LI+G+C
Sbjct: 330 VLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYC 389

Query: 282 REGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVV 339
           +  R+ EA++LF ++  +G TPN+V+Y TLI G C+   L EA  L + M   G  P + 
Sbjct: 390 KVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLF 449

Query: 340 TYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRM 399
           TY+ +L   CK+G    A RL   M      P+ V  N LI+A CK G+   A K+ + +
Sbjct: 450 TYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSEL 509

Query: 400 LEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNE 459
              GL  +   Y  +I+G CK   +D A E    M + G  P   SY+ ++ G+ +  +E
Sbjct: 510 FVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVIIRGFLHHKDE 569

Query: 460 EALLKLLDEFVSRGLCVDVSV 480
              ++L+ E   +G   DV  
Sbjct: 570 SRAVQLIGEMRDKGFIADVGT 590



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 101/309 (32%), Positives = 165/309 (53%), Gaps = 2/309 (0%)

Query: 142 NLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIH 201
           N    ++   + ++MR  N+MP +    VL++++ K+        V K M ++GV  ++ 
Sbjct: 285 NFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVV 344

Query: 202 LYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRM 261
            Y+ L++     S+V +  KL   M  K  + D+F+YN LI  YCK     EA  + + M
Sbjct: 345 TYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEM 404

Query: 262 EREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDL 319
             +G++P+ V+YN+LIHG C+ G +REAR LF+++   G  PN  TY+ L+DG+C+    
Sbjct: 405 IHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYF 464

Query: 320 EEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTL 379
            +A RL   M +    P +V YN ++  +CK G +RDA +L +E+  K + P+     T+
Sbjct: 465 GKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTI 524

Query: 380 INAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGF 439
           IN  CK G    A++    M E G   D+ +Y  +I GF   K+   A +L+  M D GF
Sbjct: 525 INGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVIIRGFLHHKDESRAVQLIGEMRDKGF 584

Query: 440 SPSYCSYSW 448
                + +W
Sbjct: 585 IADVGTTAW 593


>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
 gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
          Length = 688

 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 122/437 (27%), Positives = 218/437 (49%), Gaps = 4/437 (0%)

Query: 117 NALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLA 176
           N +V+   +PD  S+  + L+    N   T   + VF +M  +   P++     +++SL 
Sbjct: 187 NEMVRSGHEPDVISY--NTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLC 244

Query: 177 KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLF 236
           KDRL +       +MV  G+  +   YN ++H  C    +++  +L   ME    + D+ 
Sbjct: 245 KDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVV 304

Query: 237 TYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI 296
           TYN +I    K  +  +A      M  +GI PD+VTY +++HG C  G++ EA RLF+ +
Sbjct: 305 TYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKM 364

Query: 297 --KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRI 354
             KG  P+ V Y T+ID  C+   + +A+     M  +G+ P  VTY++IL   C  G++
Sbjct: 365 EQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQL 424

Query: 355 RDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKAL 414
            +A +L  EM  + + P+ +T + L++  C+ G  + A  V   M E G+  + +TY AL
Sbjct: 425 DEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNAL 484

Query: 415 IHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGL 474
           ++G+C   +M+ A+++   M+  G +P   SY+ L++GYCN    +    LL +   + L
Sbjct: 485 MNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKL 544

Query: 475 CVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSD 534
             +   Y  +++  C   ++  AQ LF  M  +G+L   + Y+ L     + G       
Sbjct: 545 TPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALK 604

Query: 535 ILDDMYRRRLMITLKIY 551
           +   M  ++L   + +Y
Sbjct: 605 LFKSMKEKKLEPDIILY 621



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 119/419 (28%), Positives = 207/419 (49%), Gaps = 2/419 (0%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           + V+ +M    + P +   T L+N +  +    +  ++Y +MV+ G   ++  YN LI+ 
Sbjct: 148 VSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLING 207

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
            C S + +    +  +ME    + ++ TYNT+I   CK  +  +A+     M   GI PD
Sbjct: 208 LCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPD 267

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLRE 327
            +TYNS++HG C  G++ EA RLF+ ++  G  P+ VTY  +ID   +   + +A     
Sbjct: 268 AITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLS 327

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
            M  +G+ P VVTY +IL  LC  G++ +A RL  +M +K   PD V  NT+I++ CK  
Sbjct: 328 EMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDR 387

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
               AM+  + M++ G+  +  TY  ++HGFC   ++D A +L   M+     P+  ++S
Sbjct: 388 LVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFS 447

Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGN 507
            LVDG C +        + +    +G+  ++  Y AL+  +C + K++ A+++F +M G 
Sbjct: 448 ILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGK 507

Query: 508 GILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
           G   D   Y  L   Y  +        +L  M  ++L      Y +          +LD
Sbjct: 508 GCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLD 566



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 129/462 (27%), Positives = 220/462 (47%), Gaps = 7/462 (1%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           SV   + K+   PD      + L+    N    +  ++++++M      P + +   L+N
Sbjct: 149 SVWGKMFKLGIQPD--VITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLIN 206

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
            L     T+M   V+KKM Q G   N+  YN +I + CK   V+     L EM  + +  
Sbjct: 207 GLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPP 266

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           D  TYN+++   C  G   EA  +  RME+ G  PD+VTYN +I    ++  + +A    
Sbjct: 267 DAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFL 326

Query: 294 RDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
            ++  +G  P+ VTYTT++ G C    L EA+RL + M  KG  P VV YN+I+  LCK+
Sbjct: 327 SEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKD 386

Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
             + DA   L+EM ++ I P+ VT +T+++ +C +G    A ++   M+   +M +  T+
Sbjct: 387 RLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTF 446

Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
             L+ G C+   +  A+ +   M + G  P+  +Y+ L++GYC +       K+ +  V 
Sbjct: 447 SILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVG 506

Query: 472 RGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKA 531
           +G   D+  Y  LI  +C   ++D A+ L   M    +  ++V Y ++       G    
Sbjct: 507 KGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLD 566

Query: 532 CSDILDDMYRRRLMITLKIYRSFSASYAKD---NEILDLFWS 570
             ++   M    ++ TL  Y        K    +E L LF S
Sbjct: 567 AQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKS 608



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 111/384 (28%), Positives = 190/384 (49%), Gaps = 4/384 (1%)

Query: 144 KMTQDGLQVF--DQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIH 201
           KM Q    V+  +QM +  +   +++  +L+N L +    D    V+ KM +LG+  ++ 
Sbjct: 105 KMKQYSTVVYLCNQMDLFGVTHTVYSLNILINCLCRLNHVDFAVSVWGKMFKLGIQPDVI 164

Query: 202 LYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRM 261
            +  LI+  C    +    +L  EM       D+ +YNTLI   C  G    A+ V  +M
Sbjct: 165 TFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKM 224

Query: 262 EREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDL 319
           E+ G  P++VTYN++I   C++  + +A     ++  +G  P+ +TY +++ G C    L
Sbjct: 225 EQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQL 284

Query: 320 EEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTL 379
            EA RL + M   G  P VVTYN I+  L K+  + DA   L+EM ++ I PD VT  T+
Sbjct: 285 NEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTI 344

Query: 380 INAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGF 439
           ++  C +G    A+++  +M + G   D   Y  +I   CK + ++ A E L  M+D G 
Sbjct: 345 LHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGI 404

Query: 440 SPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQR 499
            P+  +YS ++ G+CN    +   +L  E V R +  +   +  L+   C++  V  A+ 
Sbjct: 405 PPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARW 464

Query: 500 LFNLMQGNGILGDSVIYTSLAYAY 523
           +F  M   G+  +   Y +L   Y
Sbjct: 465 VFETMTEKGVEPNIYTYNALMNGY 488



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 117/433 (27%), Positives = 202/433 (46%), Gaps = 5/433 (1%)

Query: 141 ANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANI 200
           +N     D L  F +M   N  P +      L S+AK +    V  +  +M   GV   +
Sbjct: 69  SNTISVDDALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTV 128

Query: 201 HLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDR 260
           +  N+LI+  C+ + VD    +  +M    ++ D+ T+ TLI   C +G    A+ + + 
Sbjct: 129 YSLNILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNE 188

Query: 261 MEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRAND 318
           M R G  PD+++YN+LI+G C  G    A  +F+ ++  G  PN VTY T+ID  C+   
Sbjct: 189 MVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRL 248

Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT 378
           + +A+     M  +G+ P  +TYNSI+  LC  G++ +A RL   M +    PD VT N 
Sbjct: 249 VNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNI 308

Query: 379 LINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAG 438
           +I++  K      A    + M++ G+  D  TY  ++HG C   +++ A  L   M   G
Sbjct: 309 IIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKG 368

Query: 439 FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQ 498
             P   +Y+ ++D  C        ++ L E V RG+  +   Y  ++  FC   ++D A 
Sbjct: 369 CKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEAT 428

Query: 499 RLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASY 558
           +LF  M G  ++ +++ ++ L     + G       + + M  + +   +  Y +    Y
Sbjct: 429 QLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGY 488

Query: 559 ---AKDNEILDLF 568
               K NE   +F
Sbjct: 489 CLRCKMNEARKVF 501



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 105/396 (26%), Positives = 182/396 (45%), Gaps = 37/396 (9%)

Query: 143 LKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHL 202
           L    +  ++F +M  +   P +    ++++SL KDRL +       +MV  G+  ++  
Sbjct: 281 LGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVT 340

Query: 203 YNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRME 262
           Y  ++H  C    +++  +L  +ME K  + D+  YNT+I   CK  +  +A+     M 
Sbjct: 341 YTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMV 400

Query: 263 REGISPDIVTYNSLIHGFCREGRMREARRLFRDI-------------------------- 296
             GI P+ VTY++++HGFC  G++ EA +LF+++                          
Sbjct: 401 DRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVS 460

Query: 297 -----------KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSIL 345
                      KG  PN  TY  L++GYC    + EA ++ E+M  KG  P + +YN ++
Sbjct: 461 EARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILI 520

Query: 346 RKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLM 405
              C   R+  A  LL +M+ KK+ P+ VT NT++   C +G    A ++  +M  +G++
Sbjct: 521 NGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGML 580

Query: 406 LDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKL 465
               TY  L++G CK   +D A +L   M +    P    Y+ L++G       E    L
Sbjct: 581 PTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGL 640

Query: 466 LDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
             +  + G+      Y  +I+   K+   D A  LF
Sbjct: 641 FSKLSADGIQPPGRTYNVMIKGLLKEGLSDEAYELF 676



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 90/329 (27%), Positives = 143/329 (43%), Gaps = 4/329 (1%)

Query: 253 EALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR--DIKGATPNHVTYTTLI 310
           +ALA   RM R    P IV +   +    +  +      L    D+ G T    +   LI
Sbjct: 76  DALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNILI 135

Query: 311 DGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIA 370
           +  CR N ++ A+ +   M   G+ P V+T+ +++  +C EG+I+ A  L NEM      
Sbjct: 136 NCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHE 195

Query: 371 PDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL 430
           PD ++ NTLIN  C  G+T  A+ V  +M + G   +  TY  +I   CK + ++ A + 
Sbjct: 196 PDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDF 255

Query: 431 LFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCK 490
           L  M+  G  P   +Y+ +V G C         +L       G   DV  Y  +I    K
Sbjct: 256 LSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYK 315

Query: 491 KEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKI 550
              V+ A    + M   GI  D V YT++ +     G+      +   M ++     +  
Sbjct: 316 DRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVA 375

Query: 551 YRSFSASYAKDNEILDL--FWSHVVDRGL 577
           Y +   S  KD  + D   F S +VDRG+
Sbjct: 376 YNTIIDSLCKDRLVNDAMEFLSEMVDRGI 404



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 66/261 (25%), Positives = 113/261 (43%), Gaps = 2/261 (0%)

Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT 378
           +++AL     MA     P +V +   L  + K  +      L N+M+   +     + N 
Sbjct: 74  VDDALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNI 133

Query: 379 LINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAG 438
           LIN  C++     A+ V  +M + G+  D  T+  LI+G C   ++ +A EL   M+ +G
Sbjct: 134 LINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSG 193

Query: 439 FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQ 498
             P   SY+ L++G CN  N    + +  +    G   +V  Y  +I   CK   V+ A 
Sbjct: 194 HEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAM 253

Query: 499 RLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASY 558
              + M G GI  D++ Y S+ +     G+    + +   M +      +  Y     S 
Sbjct: 254 DFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSL 313

Query: 559 AKDNEILDL--FWSHVVDRGL 577
            KD  + D   F S +VD+G+
Sbjct: 314 YKDRLVNDAADFLSEMVDQGI 334


>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12775, mitochondrial; Flags: Precursor
 gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
           Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
           multiple PPR PF|01535 repeats. EST gb|AI999079 comes
           from this gene [Arabidopsis thaliana]
 gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 644

 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 120/430 (27%), Positives = 214/430 (49%), Gaps = 5/430 (1%)

Query: 146 TQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNV 205
             D + + D+M      P+      +LN + K   T +  ++ +KM +  +  +   Y++
Sbjct: 209 VSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSI 268

Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
           +I   CK   +D    L  EME K  +AD+ TYNTLI  +C  G   +   +   M +  
Sbjct: 269 IIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRK 328

Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEAL 323
           ISP++VT++ LI  F +EG++REA +L +++  +G  PN +TY +LIDG+C+ N LEEA+
Sbjct: 329 ISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAI 388

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
           ++ ++M +KG  P ++T+N ++   CK  RI D   L  EM+ + +  + VT NTL+  +
Sbjct: 389 QMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGF 448

Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY 443
           C+ G    A K+   M+   +  D  +YK L+ G C   E++ A E+   +  +      
Sbjct: 449 CQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDI 508

Query: 444 CSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNL 503
             Y  ++ G CN +  +    L      +G+ +D   Y  +I   C+K+ +  A  LF  
Sbjct: 509 GIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRK 568

Query: 504 MQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL---MITLKIYRSFSASYAK 560
           M   G   D + Y  L  A+    +    ++++++M        + T+K+  +  +S   
Sbjct: 569 MTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSSGEL 628

Query: 561 DNEILDLFWS 570
           D   LD+  +
Sbjct: 629 DKSFLDMLST 638



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 108/399 (27%), Positives = 199/399 (49%), Gaps = 2/399 (0%)

Query: 155 QMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSS 214
           QM    +   ++  ++++N   + R     +    K+++LG   +  ++N L++  C   
Sbjct: 113 QMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLEC 172

Query: 215 DVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYN 274
            V +  +L+  M     +  L T NTL+   C  G   +A+ + DRM   G  P+ VTY 
Sbjct: 173 RVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYG 232

Query: 275 SLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAK 332
            +++  C+ G+   A  L R +  +    + V Y+ +IDG C+   L+ A  L   M  K
Sbjct: 233 PVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIK 292

Query: 333 GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
           G    ++TYN+++   C  GR  D  +LL +M ++KI+P+ VT + LI+++ K G    A
Sbjct: 293 GFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREA 352

Query: 393 MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
            ++   M++ G+  +  TY +LI GFCK   ++ A +++  M+  G  P   +++ L++G
Sbjct: 353 DQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILING 412

Query: 453 YCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGD 512
           YC  N  +  L+L  E   RG+  +   Y  L++ FC+  K++ A++LF  M    +  D
Sbjct: 413 YCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPD 472

Query: 513 SVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIY 551
            V Y  L       GE +   +I   + + ++ + + IY
Sbjct: 473 IVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIY 511



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 106/399 (26%), Positives = 199/399 (49%), Gaps = 2/399 (0%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D + +F  M     +P +     L +++AK +  ++V  + K+M   G+  +I+  +++I
Sbjct: 71  DAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMI 130

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           +  C+   +      + ++       D   +NTL+   C +    EAL + DRM   G  
Sbjct: 131 NCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHK 190

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
           P ++T N+L++G C  G++ +A  L   +   G  PN VTY  +++  C++     A+ L
Sbjct: 191 PTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMEL 250

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
              M  + +    V Y+ I+  LCK+G + +A  L NEM  K    D +T NTLI  +C 
Sbjct: 251 LRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCN 310

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            G      K+   M++  +  +  T+  LI  F K  ++  A +LL  M+  G +P+  +
Sbjct: 311 AGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTIT 370

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+ L+DG+C +N  E  ++++D  +S+G   D+  +  LI  +CK  ++D    LF  M 
Sbjct: 371 YNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMS 430

Query: 506 GNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL 544
             G++ ++V Y +L   + ++G+ +    +  +M  RR+
Sbjct: 431 LRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRV 469



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 106/368 (28%), Positives = 183/368 (49%), Gaps = 2/368 (0%)

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
           P       LLN L  +       ++  +MV++G    +   N L++  C +  V     L
Sbjct: 156 PDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVL 215

Query: 223 LCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR 282
           +  M     + +  TY  ++ + CK G    A+ +  +ME   I  D V Y+ +I G C+
Sbjct: 216 IDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCK 275

Query: 283 EGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVT 340
           +G +  A  LF +  IKG   + +TY TLI G+C A   ++  +L   M  + + P VVT
Sbjct: 276 DGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVT 335

Query: 341 YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML 400
           ++ ++    KEG++R+A++LL EM ++ IAP+ +T N+LI+ +CK      A+++ + M+
Sbjct: 336 FSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMI 395

Query: 401 EAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEE 460
             G   D  T+  LI+G+CKA  +D   EL   M   G   +  +Y+ LV G+C     E
Sbjct: 396 SKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLE 455

Query: 461 ALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLA 520
              KL  E VSR +  D+  Y+ L+   C   +++ A  +F  ++ + +  D  IY  + 
Sbjct: 456 VAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIII 515

Query: 521 YAYWRAGE 528
           +    A +
Sbjct: 516 HGMCNASK 523



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 95/396 (23%), Positives = 179/396 (45%), Gaps = 19/396 (4%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHV 132
           N K     +  +I  L K+    +A N+  ++ ++ F +     N L+       G  + 
Sbjct: 258 NIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIG------GFCNA 311

Query: 133 LSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMV 192
             W            DG ++   M    + P++   +VL++S  K+       ++ K+M+
Sbjct: 312 GRW-----------DDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMM 360

Query: 193 QLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHY 252
           Q G+  N   YN LI   CK + +++  +++  M  K    D+ T+N LI  YCK     
Sbjct: 361 QRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRID 420

Query: 253 EALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLI 310
           + L +   M   G+  + VTYN+L+ GFC+ G++  A++LF+++  +   P+ V+Y  L+
Sbjct: 421 DGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILL 480

Query: 311 DGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIA 370
           DG C   +LE+AL +   +    +   +  Y  I+  +C   ++ DA  L   +  K + 
Sbjct: 481 DGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVK 540

Query: 371 PDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL 430
            D    N +I+  C+    + A  +  +M E G   D+ TY  LI       +   A EL
Sbjct: 541 LDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAEL 600

Query: 431 LFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLL 466
           +  M  +GF     +   +++   +   +++ L +L
Sbjct: 601 IEEMKSSGFPADVSTVKMVINMLSSGELDKSFLDML 636



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/299 (23%), Positives = 134/299 (44%), Gaps = 4/299 (1%)

Query: 288 EARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSIL 345
           +A  LFRD+      P  + +  L     +    E  L L + M +KG+   + T + ++
Sbjct: 71  DAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMI 130

Query: 346 RKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLM 405
              C+  ++  A   + ++ +    PD V  NTL+N  C     + A+++ +RM+E G  
Sbjct: 131 NCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHK 190

Query: 406 LDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKL 465
               T   L++G C   ++  A  L+  M++ GF P+  +Y  +++  C        ++L
Sbjct: 191 PTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMEL 250

Query: 466 LDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWR 525
           L +   R + +D   Y  +I   CK   +D A  LFN M+  G   D + Y +L   +  
Sbjct: 251 LRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCN 310

Query: 526 AGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI--LDLFWSHVVDRGLMSKHI 582
           AG     + +L DM +R++   +  +     S+ K+ ++   D     ++ RG+    I
Sbjct: 311 AGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTI 369


>gi|356519757|ref|XP_003528536.1| PREDICTED: protein Rf1, mitochondrial-like [Glycine max]
          Length = 871

 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 143/544 (26%), Positives = 256/544 (47%), Gaps = 37/544 (6%)

Query: 50  LYNCCHIPSLSCAFFKWAESAV-PNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRD 108
           L N C I   +     W    V    + S+ +  T++H L +  +   A+ + + I    
Sbjct: 288 LINACCIGGRTWVAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMG 347

Query: 109 FLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHAC 168
                ++ N L+      DG          ++   ++ Q  L ++++MR   + P     
Sbjct: 348 IAPNAAIYNTLM------DG----------YFKAREVAQASL-LYEEMRTTGVSPDCVTF 390

Query: 169 TVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEF 228
            +L+    K    +   ++ K ++  G+  +  LY+V++ + C +  +D+  KLL E+  
Sbjct: 391 NILVWGHYKYGRIEDSDRLLKDLIVSGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLE 450

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
           K +   +  +N+LI  Y + G+  +A      M R G +P   T NSL+ G CR+G ++E
Sbjct: 451 KGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQE 510

Query: 289 ARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILR 346
           AR L   +  KG   N V YT L+DGY + N+LE A  L + M  +G+YP  V + +++ 
Sbjct: 511 ARILLYRMLEKGFPINKVAYTVLLDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALID 570

Query: 347 KLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLML 406
            L K G + +A  +  EM+     P+N   N+LI   C  G    A+K++  M + GL+ 
Sbjct: 571 GLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLS 630

Query: 407 DQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLL 466
           D FT+  +I GFC+  +M  A E    M   G  P   +++ L+ GYC   +     +++
Sbjct: 631 DTFTFNIIIDGFCRRGQMKFAIETFLDMQRIGLLPDIFTFNILIGGYCKAFDMVGAGEIV 690

Query: 467 DEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRA 526
           ++  S GL  D++ Y   +  +C+  K++ A  + + +   GI+ D+V Y ++       
Sbjct: 691 NKMYSCGLDPDITTYNTYMHGYCRMRKMNQAVIILDQLISAGIVPDTVTYNTMLSG---- 746

Query: 527 GEPKACSDILDDMYRRRLMITLKIYR-SFSASYAKDNEILDLFWSHVVDRGLMSKHIFKE 585
                CSDILD    R +++T K+ +  F  +    N +L    SH   +G+  K +   
Sbjct: 747 ----ICSDILD----RAMILTAKLLKMGFIPNVITTNMLL----SHFCKQGMPEKALIWG 794

Query: 586 MQLR 589
            +LR
Sbjct: 795 QKLR 798



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 134/457 (29%), Positives = 225/457 (49%), Gaps = 3/457 (0%)

Query: 86  HILTKNKHFKSAQNMLEKIALRDFLS-TPSVLNALVKIHDDPDGNSHVLSWLVIFYANLK 144
           H+L   K    AQ+++  +  R     T  +++ + + H   + +  VL+ L+  + N+ 
Sbjct: 132 HVLAAQKLQLLAQDVVSWLIARVGTGRTNKIVDFMWRNHAMYESDFSVLNTLLRGFLNVG 191

Query: 145 MTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYN 204
           M  + L+V   MR   + P L + T+LL  L +      VWK++K M+  G   +   +N
Sbjct: 192 MGFEALEVLRMMRGVGVRPGLSSITILLRLLLRIGDYGSVWKLFKDMIFKGPRPSNLTFN 251

Query: 205 VLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMERE 264
            +I   C+   V   E LL  M       D+ T+N LI   C  G  + A+     M R 
Sbjct: 252 AMICGFCRQHRVVVGESLLHLMPKFMCSPDVVTFNILINACCIGGRTWVAIDWLHLMVRS 311

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           G+ P + T+ +++H  CREG + EAR+LF  I+  G  PN   Y TL+DGY +A ++ +A
Sbjct: 312 GVEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIYNTLMDGYFKAREVAQA 371

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
             L E M   GV P  VT+N ++    K GRI D++RLL ++    +  D+   + ++++
Sbjct: 372 SLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSGLFLDSSLYDVMVSS 431

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
            C  G    AMK+   +LE GL L    + +LI  + +A   D A E    M+  GF+PS
Sbjct: 432 LCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRIMVRCGFTPS 491

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             + + L+ G C K   +    LL   + +G  ++   Y  L+  + K   ++ AQ L+ 
Sbjct: 492 SSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNNLEGAQFLWK 551

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
            M+  GI  D+V +T+L     +AG  +   ++  +M
Sbjct: 552 EMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEM 588



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 84/292 (28%), Positives = 149/292 (51%), Gaps = 7/292 (2%)

Query: 133 LSWLVIFYANLKMTQ-DGLQ-VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKK 190
           +++ V+     KM   +G Q ++ +M+   + P   A T L++ L+K    +  ++V+ +
Sbjct: 528 VAYTVLLDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLE 587

Query: 191 MVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGM 250
           M  +G V N   YN LI   C    V +  KL  EM  K + +D FT+N +I  +C++G 
Sbjct: 588 MSAIGFVPNNFAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQ 647

Query: 251 HYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTT 308
              A+     M+R G+ PDI T+N LI G+C+   M  A  +   +   G  P+  TY T
Sbjct: 648 MKFAIETFLDMQRIGLLPDIFTFNILIGGYCKAFDMVGAGEIVNKMYSCGLDPDITTYNT 707

Query: 309 LIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLN-EMNEK 367
            + GYCR   + +A+ + + + + G+ P  VTYN++L  +C +  I D   +L  ++ + 
Sbjct: 708 YMHGYCRMRKMNQAVIILDQLISAGIVPDTVTYNTMLSGICSD--ILDRAMILTAKLLKM 765

Query: 368 KIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
              P+ +T N L++ +CK G    A+    ++ E     D+ +Y+ L   +C
Sbjct: 766 GFIPNVITTNMLLSHFCKQGMPEKALIWGQKLREISFGFDEISYRILDQAYC 817



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 95/385 (24%), Positives = 155/385 (40%), Gaps = 39/385 (10%)

Query: 232 RADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI--------------------- 270
            +D    NTL+  +   GM +EAL V   M   G+ P +                     
Sbjct: 174 ESDFSVLNTLLRGFLNVGMGFEALEVLRMMRGVGVRPGLSSITILLRLLLRIGDYGSVWK 233

Query: 271 --------------VTYNSLIHGFCREGRMREARRLFRDIKG--ATPNHVTYTTLIDGYC 314
                         +T+N++I GFCR+ R+     L   +     +P+ VT+  LI+  C
Sbjct: 234 LFKDMIFKGPRPSNLTFNAMICGFCRQHRVVVGESLLHLMPKFMCSPDVVTFNILINACC 293

Query: 315 RANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNV 374
                  A+    +M   GV P V T+ +IL  LC+EG + +A +L + + +  IAP+  
Sbjct: 294 IGGRTWVAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAA 353

Query: 375 TCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGM 434
             NTL++ Y K  + A A  +   M   G+  D  T+  L+ G  K   ++ +  LL  +
Sbjct: 354 IYNTLMDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDL 413

Query: 435 LDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKV 494
           + +G       Y  +V   C     +  +KLL E + +GL + V  + +LI  + +    
Sbjct: 414 IVSGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLE 473

Query: 495 DYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSF 554
           D A   + +M   G    S    SL     R G  +    +L  M  +   I    Y   
Sbjct: 474 DKAFEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVL 533

Query: 555 SASYAKDN--EILDLFWSHVVDRGL 577
              Y K N  E     W  + +RG+
Sbjct: 534 LDGYFKMNNLEGAQFLWKEMKERGI 558



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 78/287 (27%), Positives = 137/287 (47%), Gaps = 9/287 (3%)

Query: 146 TQDGLQVFDQMRVHNLMPHLHACTVLLNSLAK-DRLTDMVWKVYKKMVQLGVVANIHLYN 204
            ++  +VF +M     +P+  A   L+  L    R+T+ + K+ K+M Q G++++   +N
Sbjct: 578 VEEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCGRVTEAL-KLEKEMRQKGLLSDTFTFN 636

Query: 205 VLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMERE 264
           ++I   C+   +    +   +M+   +  D+FT+N LI  YCK      A  + ++M   
Sbjct: 637 IIIDGFCRRGQMKFAIETFLDMQRIGLLPDIFTFNILIGGYCKAFDMVGAGEIVNKMYSC 696

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEA 322
           G+ PDI TYN+ +HG+CR  +M +A  +   +   G  P+ VTY T++ G C ++ L+ A
Sbjct: 697 GLDPDITTYNTYMHGYCRMRKMNQAVIILDQLISAGIVPDTVTYNTMLSGIC-SDILDRA 755

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
           + L   +   G  P V+T N +L   CK+G    A     ++ E     D ++   L  A
Sbjct: 756 MILTAKLLKMGFIPNVITTNMLLSHFCKQGMPEKALIWGQKLREISFGFDEISYRILDQA 815

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKE 429
           YC + D    ++      E  L +D   Y    + F + K   I  E
Sbjct: 816 YCLMQDDVELVR---GTYEKHLFMDFLMYITFDY-FSRNKPQKIENE 858


>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 543

 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 110/349 (31%), Positives = 190/349 (54%), Gaps = 6/349 (1%)

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
           D++ +V   +VQ  VV    +Y+ +I   CK   V+    L  EM  K +  ++ TY+ L
Sbjct: 183 DLLRRVDGNLVQPNVV----MYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSAL 238

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGA 299
           I+ +   G   +A+ + ++M  E I PD+ T+N L+ GFC++G+M+E + +F  +  +G 
Sbjct: 239 ISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGI 298

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
            PN VTY +L+DGYC   ++ +A  +   M+ +GV P + +YN ++   CK  ++ +A  
Sbjct: 299 KPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMN 358

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
           L  EM+ K I PD VT N+LI+  CK+G  + A+K+ + M + G+  D  TY +++   C
Sbjct: 359 LFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALC 418

Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
           K  ++D A  LL  + D G  P+  +Y+ L+DG C     E    + ++ + +G  + V+
Sbjct: 419 KNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVN 478

Query: 480 VYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
            Y  +I  FC K   D A  L + M+ N  + D+V Y  +  + +   E
Sbjct: 479 TYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEIIIRSLFDKDE 527



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 109/335 (32%), Positives = 169/335 (50%), Gaps = 18/335 (5%)

Query: 203 YNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLF----------------TYNTLIALYC 246
           +N ++ +  KS     V  L  +MEF+ +   LF                T+ TLI   C
Sbjct: 79  FNKILGSLVKSKHYHTVLSLSQQMEFEGINPVLFHFQHPHQLMGYHPNTITFTTLIKGLC 138

Query: 247 KKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKG--ATPNHV 304
            KG  ++AL   D +   G   D V Y +LIHG C+ G  R A  L R + G    PN V
Sbjct: 139 LKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVV 198

Query: 305 TYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM 364
            Y+T+IDG C+   + +A  L   M +KG+ P VVTY++++      G+++DA  L N+M
Sbjct: 199 MYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKM 258

Query: 365 NEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEM 424
             + I PD  T N L++ +CK G       V   M++ G+  +  TY +L+ G+C  KE+
Sbjct: 259 ILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEV 318

Query: 425 DIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRAL 484
           + AK +L+ M   G +P   SY+ L+DG+C     +  + L  E   + +  DV  Y +L
Sbjct: 319 NKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSL 378

Query: 485 IRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
           I   CK  K+ YA +L + M   G+  D + Y+S+
Sbjct: 379 IDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSI 413



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 97/342 (28%), Positives = 188/342 (54%), Gaps = 2/342 (0%)

Query: 161 LMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVE 220
           + P++   + +++ + KD+  +  + +Y +MV  G+  N+  Y+ LI        +    
Sbjct: 193 VQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAI 252

Query: 221 KLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGF 280
            L  +M  ++++ D++T+N L+  +CK G   E   V   M ++GI P++VTY SL+ G+
Sbjct: 253 DLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGY 312

Query: 281 CREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGV 338
           C    + +A+ +   +  +G  P+  +Y  LIDG+C+   ++EA+ L + M  K + P V
Sbjct: 313 CLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDV 372

Query: 339 VTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNR 398
           VTYNS++  LCK G+I  A +L++EM+++ + PD +T +++++A CK      A+ +  +
Sbjct: 373 VTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTK 432

Query: 399 MLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNN 458
           + + G+  + +TY  LI G CK   ++ A  +   +L  G++ +  +Y+ ++ G+CNK  
Sbjct: 433 LKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGL 492

Query: 459 EEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRL 500
            +  L LL +        D   Y  +IR    K++ D A++L
Sbjct: 493 FDEALALLSKMKDNSCIPDAVTYEIIIRSLFDKDENDKAEKL 534



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 102/346 (29%), Positives = 168/346 (48%), Gaps = 20/346 (5%)

Query: 238 YNTLIALYCKKGMHYEALAVQDRMEREGISP----------------DIVTYNSLIHGFC 281
           +N ++    K   ++  L++  +ME EGI+P                + +T+ +LI G C
Sbjct: 79  FNKILGSLVKSKHYHTVLSLSQQMEFEGINPVLFHFQHPHQLMGYHPNTITFTTLIKGLC 138

Query: 282 REGRMREARRLFRD---IKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGV 338
            +G++ +A  LF D     G   + V Y TLI G C+  +   AL L   +    V P V
Sbjct: 139 LKGQIHQAL-LFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNV 197

Query: 339 VTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNR 398
           V Y++I+  +CK+  + DA  L +EM  K I+P+ VT + LI+ +  +G    A+ + N+
Sbjct: 198 VMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNK 257

Query: 399 MLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNN 458
           M+   +  D +T+  L+ GFCK  +M   K +   M+  G  P+  +Y  L+DGYC    
Sbjct: 258 MILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKE 317

Query: 459 EEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTS 518
                 +L     RG+  D+  Y  LI  FCK +KVD A  LF  M    I+ D V Y S
Sbjct: 318 VNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNS 377

Query: 519 LAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
           L     + G+      ++D+M+ R +   +  Y S   +  K++++
Sbjct: 378 LIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQV 423



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 83/261 (31%), Positives = 128/261 (49%), Gaps = 3/261 (1%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           ++G  VF  M    + P++     L++     +  +    +   M Q GV  +I  YN+L
Sbjct: 284 KEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNIL 343

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           I   CK   VD+   L  EM  K +  D+ TYN+LI   CK G    AL + D M   G+
Sbjct: 344 IDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGV 403

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALR 324
            PDI+TY+S++   C+  ++ +A  L   +K  G  PN  TYT LIDG C+   LE+A  
Sbjct: 404 PPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHN 463

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           + E +  KG    V TY  ++   C +G   +A  LL++M +    PD VT   +I +  
Sbjct: 464 IFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEIIIRSLF 523

Query: 385 KIGDTASAMKVKNRMLEAGLM 405
              +   A K++  M+  GL+
Sbjct: 524 DKDENDKAEKLR-EMITRGLL 543



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 60/223 (26%), Positives = 114/223 (51%), Gaps = 5/223 (2%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           S+L  + +   +PD  S+  + L+  +  +K   + + +F +M   +++P +     L++
Sbjct: 323 SILYTMSQRGVNPDIQSY--NILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLID 380

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
            L K        K+  +M   GV  +I  Y+ ++ A CK+  VDK   LL +++ + +R 
Sbjct: 381 GLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRP 440

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           +++TY  LI   CK G   +A  + + +  +G +  + TY  +IHGFC +G   EA  L 
Sbjct: 441 NMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALL 500

Query: 294 RDIKGAT--PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGV 334
             +K  +  P+ VTY  +I      ++ ++A +LRE M  +G+
Sbjct: 501 SKMKDNSCIPDAVTYEIIIRSLFDKDENDKAEKLRE-MITRGL 542


>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
 gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
          Length = 761

 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 125/494 (25%), Positives = 240/494 (48%), Gaps = 19/494 (3%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHV 132
           N + S+ S+  +++IL ++ +FK A  +   + +++    P V    ++I          
Sbjct: 106 NCEPSVLSYNAIMNILVESGYFKQAHKVF--LRMKNVGIVPDVYTFTIRIKS-------- 155

Query: 133 LSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMV 192
                  +   K     L++ + M       +  A   ++    ++      ++++  M+
Sbjct: 156 -------FCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYELFNDML 208

Query: 193 QLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHY 252
           ++G+  ++  +N L+H  CK  +V + E+LL ++  K + ++LFT+N  I   C+KGM  
Sbjct: 209 RIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLS 268

Query: 253 EALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLI 310
            A+++ D + REG++PD+VTYN+LI G C+   + EA +    +   G  P+  TY TLI
Sbjct: 269 GAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLI 328

Query: 311 DGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIA 370
           DGYC+   L+ A ++ +    KG  P   TY S++  LC+   I  A  L N    K + 
Sbjct: 329 DGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLK 388

Query: 371 PDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL 430
           P  +  N LI   C+ G    A+++ N M E G   D +TY  +I+G CK   +  A  L
Sbjct: 389 PTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNL 448

Query: 431 LFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCK 490
           +   +  G+ P   +++ L+DGYC +   E  +++L++  S G+  DV  Y +++    K
Sbjct: 449 MNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSK 508

Query: 491 KEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKI 550
             K +     F  M   G + + + Y  L  +  +AG+     D++D++  + +      
Sbjct: 509 AVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVS 568

Query: 551 YRSFSASYAKDNEI 564
           + +  + +A + ++
Sbjct: 569 FATIISGFANNGDL 582



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 135/513 (26%), Positives = 246/513 (47%), Gaps = 20/513 (3%)

Query: 74  YKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVL 133
           +KHSL ++  +I  L  + +F + +N+L +  +        + N+L++          V 
Sbjct: 36  FKHSLLTYKCIIQKLGFHGNFVAMENVLAETRM-------DIDNSLLE---------GVY 79

Query: 134 SWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQ 193
              +  Y      Q+ + VF++M  +N  P + +   ++N L +        KV+ +M  
Sbjct: 80  IGAMKSYGRKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRMKN 139

Query: 194 LGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYE 253
           +G+V +++ + + I + C++       +LL  M  +  + +   Y T++A + ++    E
Sbjct: 140 VGIVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVE 199

Query: 254 ALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLID 311
           A  + + M R GI PD+ T+N L+H  C++G ++E+ RL   +  KG   N  T+   I 
Sbjct: 200 AYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQ 259

Query: 312 GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAP 371
           G CR   L  A+ + + +  +G+ P VVTYN+++  LCK   + +A + L+++    + P
Sbjct: 260 GLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEP 319

Query: 372 DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
           D  T NTLI+ YCK+G   +A K+    +  G + D+FTY +LI+G C+  E+D A  L 
Sbjct: 320 DGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALF 379

Query: 432 FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
              L  G  P+   Y+ L+ G C +      L++++E    G   D+  Y  +I   CK 
Sbjct: 380 NAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKM 439

Query: 492 EKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIY 551
             V  A  L N     G + D   + +L   Y +  + +    IL+ M+   +   +  Y
Sbjct: 440 GCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITY 499

Query: 552 RSF--SASYAKDNEILDLFWSHVVDRGLMSKHI 582
            S     S A  NE L   +  +V++G +   I
Sbjct: 500 NSVLNGLSKAVKNEDLMETFETMVEKGCVPNKI 532



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 112/430 (26%), Positives = 212/430 (49%), Gaps = 9/430 (2%)

Query: 116 LNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSL 175
           L+ LV    +PDG ++  + L+  Y  + M Q+  ++         +P       L+N L
Sbjct: 309 LHKLVNGGLEPDGFTY--NTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGL 366

Query: 176 AKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADL 235
            ++   D    ++   +  G+   + LYN+LI   C+   + +  +++ EM      +D+
Sbjct: 367 CQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDI 426

Query: 236 FTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD 295
           +TYN +I   CK G   +A  + +    +G  PD+ T+N+LI G+C++ +M    ++   
Sbjct: 427 WTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNK 486

Query: 296 I--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGR 353
           +   G TP+ +TY ++++G  +A   E+ +   E M  KG  P  +TYN +   LCK G+
Sbjct: 487 MWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGK 546

Query: 354 IRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEA-GLMLDQFTYK 412
           + +A  L++E+  K I PD V+  T+I+ +   GD   A ++  RM E   +     TY 
Sbjct: 547 VNEALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYN 606

Query: 413 ALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSR 472
            +I+ F +  ++ + ++L   M   G +P   +Y  ++DG+C   N ++  K L E + +
Sbjct: 607 IMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKFLLEMIEK 666

Query: 473 GLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKAC 532
           G    ++ +  +I   C + +V  A  + + M  NGI+ + V   S A     A  PK  
Sbjct: 667 GFIPSLTTFGRVINCLCVQHRVHEAVDIIHFMVHNGIVPEVVNSISEADKKVVAA-PKI- 724

Query: 533 SDILDDMYRR 542
             +++D+ +R
Sbjct: 725 --VVEDLLKR 732


>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
           [Arabidopsis thaliana]
          Length = 602

 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 108/367 (29%), Positives = 193/367 (52%), Gaps = 2/367 (0%)

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
           P       L+N L  +        +  +MV+ G   ++  YN +++  C+S D      +
Sbjct: 156 PDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDM 215

Query: 223 LCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR 282
           L +ME ++V+AD+FTY+T+I   C+ G    A+++   ME +GI   +VTYNSL+ G C+
Sbjct: 216 LRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCK 275

Query: 283 EGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVT 340
            G+  +   L +D+  +   PN +T+  L+D + +   L+EA  L + M  +G+ P ++T
Sbjct: 276 AGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIIT 335

Query: 341 YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML 400
           YN+++   C + R+ +AN +L+ M   K +PD VT  +LI  YC +      MKV   + 
Sbjct: 336 YNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNIS 395

Query: 401 EAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEE 460
           + GL+ +  TY  L+ GFC++ ++ +A+EL   M+  G  P   +Y  L+DG C+    E
Sbjct: 396 KRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLE 455

Query: 461 ALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLA 520
             L++ ++     + + + +Y  +I   CK  KV+ A  LF  +   G+  + + YT + 
Sbjct: 456 KALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMI 515

Query: 521 YAYWRAG 527
               + G
Sbjct: 516 SGLCKKG 522



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 123/428 (28%), Positives = 215/428 (50%), Gaps = 16/428 (3%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D + +F +M     +P L   +   +++A+ +  ++V    K++   G+  NI+  N++I
Sbjct: 71  DAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMI 130

Query: 208 HA---CCKS----SDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDR 260
           +    CCK+    S + KV KL  E        D  T+NTLI   C +G   +A+ + DR
Sbjct: 131 NCFCRCCKTCFAYSVLGKVMKLGYE-------PDTTTFNTLINGLCLEGKVSKAVVLVDR 183

Query: 261 MEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRAND 318
           M   G  PD+VTYNS+++G CR G    A  + R +  +    +  TY+T+ID  CR   
Sbjct: 184 MVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGC 243

Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT 378
           ++ A+ L + M  KG+   VVTYNS++R LCK G+  D   LL +M  ++I P+ +T N 
Sbjct: 244 IDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNV 303

Query: 379 LINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAG 438
           L++ + K G    A ++   M+  G+  +  TY  L+ G+C    +  A  +L  M+   
Sbjct: 304 LLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNK 363

Query: 439 FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQ 498
            SP   +++ L+ GYC     +  +K+      RGL  +   Y  L++ FC+  K+  A+
Sbjct: 364 CSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAE 423

Query: 499 RLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASY 558
            LF  M  +G+L D + Y  L       G+ +   +I +D+ + ++ + + +Y +     
Sbjct: 424 ELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGM 483

Query: 559 AKDNEILD 566
            K  ++ D
Sbjct: 484 CKGGKVED 491



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 116/468 (24%), Positives = 231/468 (49%), Gaps = 16/468 (3%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           SVL  ++K+  +PD  +   + L+            + + D+M  +   P +     ++N
Sbjct: 144 SVLGKVMKLGYEPD--TTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVN 201

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
            + +   T + + + +KM +  V A++  Y+ +I + C+   +D    L  EME K +++
Sbjct: 202 GICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKS 261

Query: 234 DLFTYNTLIALYCKKGMHYE-ALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRL 292
            + TYN+L+   CK G   + AL ++D + RE I P+++T+N L+  F +EG+++EA  L
Sbjct: 262 SVVTYNSLVRGLCKAGKWNDGALLLKDMVSRE-IVPNVITFNVLLDVFVKEGKLQEANEL 320

Query: 293 FRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
           ++++  +G +PN +TY TL+DGYC  N L EA  + ++M      P +VT+ S+++  C 
Sbjct: 321 YKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCM 380

Query: 351 EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
             R+ D  ++   ++++ +  + VT + L+  +C+ G    A ++   M+  G++ D  T
Sbjct: 381 VKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMT 440

Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFV 470
           Y  L+ G C   +++ A E+   +  +        Y+ +++G C     E    L     
Sbjct: 441 YGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLP 500

Query: 471 SRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPK 530
            +G+  +V  Y  +I   CKK  +  A  L   M+ +G   +   Y +L  A+ R G+  
Sbjct: 501 CKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLT 560

Query: 531 ACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLM 578
           A + ++++M              FSA  +    ++D+  S  +D+  +
Sbjct: 561 ASAKLIEEMKS----------CGFSADASSIKMVIDMLLSGELDKSFL 598



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 102/415 (24%), Positives = 190/415 (45%), Gaps = 19/415 (4%)

Query: 54  CHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTP 113
           C     S AF    +    N K  + ++ T+I  L ++    +A ++ +++  +   S+ 
Sbjct: 204 CRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSV 263

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
              N+LV+      G      W            DG  +   M    ++P++    VLL+
Sbjct: 264 VTYNSLVR------GLCKAGKW-----------NDGALLLKDMVSREIVPNVITFNVLLD 306

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
              K+       ++YK+M+  G+  NI  YN L+   C  + + +   +L  M       
Sbjct: 307 VFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSP 366

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           D+ T+ +LI  YC      + + V   + + G+  + VTY+ L+ GFC+ G+++ A  LF
Sbjct: 367 DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELF 426

Query: 294 RDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
           +++   G  P+ +TY  L+DG C    LE+AL + E +    +  G+V Y +I+  +CK 
Sbjct: 427 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKG 486

Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
           G++ DA  L   +  K + P+ +T   +I+  CK G  + A  +  +M E G   +  TY
Sbjct: 487 GKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTY 546

Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLL 466
             LI    +  ++  + +L+  M   GFS    S   ++D   +   +++ L +L
Sbjct: 547 NTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSGELDKSFLDML 601



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/260 (22%), Positives = 115/260 (44%), Gaps = 2/260 (0%)

Query: 320 EEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTL 379
           ++A+ L + M      PG+V ++     + +  +         ++    IA +  T N +
Sbjct: 70  DDAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129

Query: 380 INAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGF 439
           IN +C+   T  A  V  ++++ G   D  T+  LI+G C   ++  A  L+  M++ G 
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGC 189

Query: 440 SPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQR 499
            P   +Y+ +V+G C   +      +L +   R +  DV  Y  +I   C+   +D A  
Sbjct: 190 QPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249

Query: 500 LFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYA 559
           LF  M+  GI    V Y SL     +AG+    + +L DM  R ++  +  +      + 
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 309

Query: 560 KDNEILDL--FWSHVVDRGL 577
           K+ ++ +    +  ++ RG+
Sbjct: 310 KEGKLQEANELYKEMITRGI 329


>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 686

 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 125/441 (28%), Positives = 215/441 (48%), Gaps = 15/441 (3%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           + ++ +M    +   +++ T+L+               + K+ +LG+  ++  +  L+H 
Sbjct: 101 ISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHG 160

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
            C    V +   L  ++     R D+ T+ TL+   C++G   EA+A+ DRM   G+ PD
Sbjct: 161 LCLDHRVSEALDLFHQI----CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPD 216

Query: 270 IVTYNSLIHGFCREGRMREARRLFR---DIKGATPNHVTYTTLIDGYCRANDLEEALRLR 326
            +TY + + G C+ G    A  L R   +I    PN V Y+ +IDG C+     ++  L 
Sbjct: 217 QITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLF 276

Query: 327 EVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKI 386
             M  KG++P +VTYN ++   C  GR   A RLL EM E+KI+P+ VT N LINA+ K 
Sbjct: 277 IEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKE 336

Query: 387 GDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSY 446
           G    A ++ + ML  G++ +  TY ++I GFCK   +D A+++ + M   G SP   ++
Sbjct: 337 GKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTF 396

Query: 447 SWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQG 506
           + L+DGYC     +  ++LL E   RGL  +   Y  LI  FC    ++ A  L   M  
Sbjct: 397 TTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMIS 456

Query: 507 NGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
           +G+  D V   +L       G+ K   ++   M + ++           AS+  +    D
Sbjct: 457 SGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKM--------DLDASHPFNGVEPD 508

Query: 567 LFWSHVVDRGLMSKHIFKEMQ 587
           +   +++  GL+++  F E +
Sbjct: 509 VLTYNILICGLINEGKFLEAE 529



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 132/520 (25%), Positives = 233/520 (44%), Gaps = 63/520 (12%)

Query: 83  TMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVK--------------IHDDPDG 128
           T++H L  +     A ++  +I   D L+  +++N L +              + +    
Sbjct: 156 TLLHGLCLDHRVSEALDLFHQICRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQP 215

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMR-VHNLMPHLHACTVLLNSLAKDRLTDMVWKV 187
           +       V     +  T   L +  +M  + ++ P++   + +++ L KD        +
Sbjct: 216 DQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNL 275

Query: 188 YKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCK 247
           + +M   G+  NI  YN +I   C S      ++LL EM  + +  ++ TYN LI  + K
Sbjct: 276 FIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVK 335

Query: 248 KGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF--RDIKGATPNHVT 305
           +G  +EA  + D M   GI P+ +TYNS+I GFC++ R+  A  +F     KG +P+  T
Sbjct: 336 EGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFT 395

Query: 306 YTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMN 365
           +TTLIDGYC A  +++ + L   M  +G+    VTYN+++   C  G +  A  L  +M 
Sbjct: 396 FTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMI 455

Query: 366 EKKIAPDNVTCNTLINAYCKIGDTASAMKV------------------------------ 395
              + PD VTCNTL++  C  G    A+++                              
Sbjct: 456 SSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNIL 515

Query: 396 ------KNRMLEA----------GLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGF 439
                 + + LEA          G++ D  TY ++I G CK   +D A ++   M    F
Sbjct: 516 ICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSF 575

Query: 440 SPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQR 499
           SP+  +++ L++GYC     +  L+L  E   RG+  D  +Y  LI  F K   ++ A  
Sbjct: 576 SPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALD 635

Query: 500 LFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
           +F  M  +G+  D++   ++   +W   E +    +L+D+
Sbjct: 636 IFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDL 675



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 107/369 (28%), Positives = 189/369 (51%), Gaps = 3/369 (0%)

Query: 187 VYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYC 246
           ++  M++   + ++  +N L+ A  +    D V  L  +ME K +R D++++  LI  +C
Sbjct: 68  LFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFC 127

Query: 247 KKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGATPNHVTY 306
                  AL+   ++ + G+ PD+VT+ +L+HG C + R+ EA  LF  I    P+ +T+
Sbjct: 128 SCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI--CRPDVLTF 185

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
           TTL++G CR   + EA+ L + M   G+ P  +TY + +  +CK G    A  LL +M E
Sbjct: 186 TTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEE 245

Query: 367 -KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMD 425
              I P+ V  + +I+  CK G  + +  +   M + G+  +  TY  +I GFC +    
Sbjct: 246 ISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWS 305

Query: 426 IAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
            A+ LL  ML+   SP+  +Y+ L++ +  +       +L DE + RG+  +   Y ++I
Sbjct: 306 AAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMI 365

Query: 486 RRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
             FCK++++D A+ +F LM   G   D   +T+L   Y  A       ++L +M RR L+
Sbjct: 366 DGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLV 425

Query: 546 ITLKIYRSF 554
                Y + 
Sbjct: 426 ANTVTYNTL 434



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 105/368 (28%), Positives = 170/368 (46%), Gaps = 13/368 (3%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           ++  +M    + P++     L+N+  K+       ++Y +M+  G++ N   YN +I   
Sbjct: 309 RLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGF 368

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           CK   +D  E +   M  K    D+FT+ TLI  YC      + + +   M R G+  + 
Sbjct: 369 CKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANT 428

Query: 271 VTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
           VTYN+LIHGFC  G +  A  L + +   G  P+ VT  TL+DG C    L++AL + + 
Sbjct: 429 VTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKA 488

Query: 329 MAAK-----------GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCN 377
           M              GV P V+TYN ++  L  EG+  +A  L  EM  + I PD +T +
Sbjct: 489 MQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYS 548

Query: 378 TLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA 437
           ++I+  CK      A ++   M       +  T+  LI+G+CKA  +D   EL   M   
Sbjct: 549 SMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRR 608

Query: 438 GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYA 497
           G       Y  L+ G+    N    L +  E +S G+  D    R ++  F  KE+++ A
Sbjct: 609 GIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERA 668

Query: 498 QRLFNLMQ 505
             +   +Q
Sbjct: 669 VAMLEDLQ 676



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 88/331 (26%), Positives = 152/331 (45%), Gaps = 11/331 (3%)

Query: 245 YCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPN 302
           Y  KG+  +A+ +   M R    P ++ +N L+    R  R      L++ +  K    +
Sbjct: 57  YEIKGLE-DAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCD 115

Query: 303 HVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLN 362
             ++T LI  +C  + L  AL     +   G++P VVT+ ++L  LC + R+ +A  L +
Sbjct: 116 IYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFH 175

Query: 363 EMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAK 422
           ++      PD +T  TL+N  C+ G    A+ + +RM+E GL  DQ TY   + G CK  
Sbjct: 176 QI----CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMG 231

Query: 423 EMDIAKELLFGMLD-AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVY 481
           +   A  LL  M + +   P+   YS ++DG C          L  E   +G+  ++  Y
Sbjct: 232 DTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTY 291

Query: 482 RALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
             +I  FC   +   AQRL   M    I  + V Y +L  A+ + G+    +++ D+M  
Sbjct: 292 NCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLP 351

Query: 542 RRLMITLKIYRSFSASYAKDNEI---LDLFW 569
           R ++     Y S    + K + +    D+F+
Sbjct: 352 RGIIPNTITYNSMIDGFCKQDRLDAAEDMFY 382



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 67/299 (22%), Positives = 121/299 (40%), Gaps = 36/299 (12%)

Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT 378
           LE+A+ L   M      P V+ +N ++  + +  R      L  +M  K+I  D  +   
Sbjct: 62  LEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTI 121

Query: 379 LINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC----KAKEMDI-------- 426
           LI  +C       A+    ++ + GL  D  T+  L+HG C     ++ +D+        
Sbjct: 122 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICRPD 181

Query: 427 -------------------AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLD 467
                              A  LL  M++ G  P   +Y   VDG C   +  + L LL 
Sbjct: 182 VLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLR 241

Query: 468 --EFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWR 525
             E +S  +  +V +Y A+I   CK  +   +  LF  MQ  GI  + V Y  +   +  
Sbjct: 242 KMEEISH-IKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCI 300

Query: 526 AGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDL--FWSHVVDRGLMSKHI 582
           +G   A   +L +M  R++   +  Y +   ++ K+ +  +    +  ++ RG++   I
Sbjct: 301 SGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTI 359


>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
 gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
          Length = 735

 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 105/340 (30%), Positives = 186/340 (54%), Gaps = 2/340 (0%)

Query: 190 KMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKG 249
           +MV+ G   ++  YN +++  C+S D      LL +ME ++V+AD+FTY+T+I   C+ G
Sbjct: 183 RMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDG 242

Query: 250 MHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYT 307
               A+++   ME +GI   +VTYNSL+ G C+ G+  +   L +D+  +   PN +T+ 
Sbjct: 243 CIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFN 302

Query: 308 TLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEK 367
            L+D + +   L+EA  L + M  +G+ P ++TYN+++   C + R+ +AN +L+ M   
Sbjct: 303 VLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRN 362

Query: 368 KIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIA 427
           K +PD VT  +LI  YC +      MKV   + + GL+ +  TY  L+ GFC++ ++ +A
Sbjct: 363 KCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLA 422

Query: 428 KELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRR 487
           +EL   M+  G  P   +Y  L+DG C+    E  L++ ++     + + + +Y  +I  
Sbjct: 423 EELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEG 482

Query: 488 FCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
            CK  KV+ A  LF  +   G+  + + YT +     + G
Sbjct: 483 MCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKG 522



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 124/428 (28%), Positives = 214/428 (50%), Gaps = 16/428 (3%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D + +F +M     +P L   +   +++A+ +  ++V    K++   G+  NI+  N++I
Sbjct: 71  DAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMI 130

Query: 208 HA---CCKS----SDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDR 260
           +    CCK+    S + KV KL  E        D  T+NTLI     +G   EA+ + DR
Sbjct: 131 NCFCRCCKTCFAYSVLGKVMKLGYE-------PDTTTFNTLIKGLFLEGKVSEAVVLVDR 183

Query: 261 MEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRAND 318
           M   G  PD+VTYNS+++G CR G    A  L R +  +    +  TY+T+ID  CR   
Sbjct: 184 MVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGC 243

Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT 378
           ++ A+ L + M  KG+   VVTYNS++R LCK G+  D   LL +M  ++I P+ +T N 
Sbjct: 244 IDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNV 303

Query: 379 LINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAG 438
           L++ + K G    A ++   M+  G+  +  TY  L+ G+C    +  A  +L  M+   
Sbjct: 304 LLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNK 363

Query: 439 FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQ 498
            SP   +++ L+ GYC     +  +K+      RGL  +   Y  L++ FC+  K+  A+
Sbjct: 364 CSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAE 423

Query: 499 RLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASY 558
            LF  M  +G+L D + Y  L       G+ +   +I +D+ + ++ + + +Y +     
Sbjct: 424 ELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGM 483

Query: 559 AKDNEILD 566
            K  ++ D
Sbjct: 484 CKGGKVED 491



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 110/429 (25%), Positives = 217/429 (50%), Gaps = 6/429 (1%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           SVL  ++K+  +PD  +       +F        + + + D+M  +   P +     ++N
Sbjct: 144 SVLGKVMKLGYEPDTTTFNTLIKGLFLEG--KVSEAVVLVDRMVENGCQPDVVTYNSIVN 201

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
            + +   T +   + +KM +  V A++  Y+ +I + C+   +D    L  EME K +++
Sbjct: 202 GICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKS 261

Query: 234 DLFTYNTLIALYCKKGMHYE-ALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRL 292
            + TYN+L+   CK G   + AL ++D + RE I P+++T+N L+  F +EG+++EA  L
Sbjct: 262 SVVTYNSLVRGLCKAGKWNDGALLLKDMVSRE-IVPNVITFNVLLDVFVKEGKLQEANEL 320

Query: 293 FRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
           ++++  +G +PN +TY TL+DGYC  N L EA  + ++M      P +VT+ S+++  C 
Sbjct: 321 YKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCM 380

Query: 351 EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
             R+ D  ++   ++++ +  + VT + L+  +C+ G    A ++   M+  G++ D  T
Sbjct: 381 VKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMT 440

Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFV 470
           Y  L+ G C   +++ A E+   +  +        Y+ +++G C     E    L     
Sbjct: 441 YGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLP 500

Query: 471 SRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPK 530
            +G+  +V  Y  +I   CKK  +  A  L   M+ +G   +   Y +L  A+ R G+  
Sbjct: 501 CKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLT 560

Query: 531 ACSDILDDM 539
           A + ++++M
Sbjct: 561 ASAKLIEEM 569



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 93/370 (25%), Positives = 184/370 (49%), Gaps = 2/370 (0%)

Query: 146 TQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNV 205
           T   L +  +M   N+   +   + +++SL +D   D    ++K+M   G+ +++  YN 
Sbjct: 209 TSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNS 268

Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
           L+   CK+   +    LL +M  +++  ++ T+N L+ ++ K+G   EA  +   M   G
Sbjct: 269 LVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRG 328

Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEAL 323
           ISP+I+TYN+L+ G+C + R+ EA  +   +     +P+ VT+T+LI GYC    +++ +
Sbjct: 329 ISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGM 388

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
           ++   ++ +G+    VTY+ +++  C+ G+I+ A  L  EM    + PD +T   L++  
Sbjct: 389 KVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGL 448

Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY 443
           C  G    A+++   + ++ + L    Y  +I G CK  +++ A  L   +   G  P+ 
Sbjct: 449 CDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNV 508

Query: 444 CSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNL 503
            +Y+ ++ G C K +      LL +    G   +   Y  LIR   +   +  + +L   
Sbjct: 509 MTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEE 568

Query: 504 MQGNGILGDS 513
           M+  G   D+
Sbjct: 569 MKSCGFSADA 578



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 101/343 (29%), Positives = 167/343 (48%), Gaps = 10/343 (2%)

Query: 149 GLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWK----VYKKMVQLGVVANIHLYN 204
            + +F +M    +     +  V  NSL +       W     + K MV   +V N+  +N
Sbjct: 247 AISLFKEMETKGI----KSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFN 302

Query: 205 VLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMERE 264
           VL+    K   + +  +L  EM  + +  ++ TYNTL+  YC +    EA  + D M R 
Sbjct: 303 VLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRN 362

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEA 322
             SPDIVT+ SLI G+C   R+ +  ++FR+I  +G   N VTY+ L+ G+C++  ++ A
Sbjct: 363 KCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLA 422

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
             L + M + GV P V+TY  +L  LC  G++  A  +  ++ + K+    V   T+I  
Sbjct: 423 EELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEG 482

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
            CK G    A  +   +   G+  +  TY  +I G CK   +  A  LL  M + G +P+
Sbjct: 483 MCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPN 542

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
            C+Y+ L+  +    +  A  KL++E  S G   D S  + +I
Sbjct: 543 DCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVI 585



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 96/381 (25%), Positives = 178/381 (46%), Gaps = 19/381 (4%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHV 132
           N K  + ++ T+I  L ++    +A ++ +++  +   S+    N+LV+      G    
Sbjct: 223 NVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVR------GLCKA 276

Query: 133 LSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMV 192
             W            DG  +   M    ++P++    VLL+   K+       ++YK+M+
Sbjct: 277 GKW-----------NDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMI 325

Query: 193 QLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHY 252
             G+  NI  YN L+   C  + + +   +L  M       D+ T+ +LI  YC      
Sbjct: 326 TRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVD 385

Query: 253 EALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLI 310
           + + V   + + G+  + VTY+ L+ GFC+ G+++ A  LF+++   G  P+ +TY  L+
Sbjct: 386 DGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILL 445

Query: 311 DGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIA 370
           DG C    LE+AL + E +    +  G+V Y +I+  +CK G++ DA  L   +  K + 
Sbjct: 446 DGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVK 505

Query: 371 PDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL 430
           P+ +T   +I+  CK G  + A  +  +M E G   +  TY  LI    +  ++  + +L
Sbjct: 506 PNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKL 565

Query: 431 LFGMLDAGFSPSYCSYSWLVD 451
           +  M   GFS    S   ++D
Sbjct: 566 IEEMKSCGFSADASSIKMVID 586



 Score = 82.0 bits (201), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 59/260 (22%), Positives = 113/260 (43%), Gaps = 2/260 (0%)

Query: 320 EEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTL 379
           ++A+ L + M      P +V ++     + +  +         ++    IA +  T N +
Sbjct: 70  DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129

Query: 380 INAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGF 439
           IN +C+   T  A  V  ++++ G   D  T+  LI G     ++  A  L+  M++ G 
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189

Query: 440 SPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQR 499
            P   +Y+ +V+G C   +    L LL +   R +  DV  Y  +I   C+   +D A  
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249

Query: 500 LFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYA 559
           LF  M+  GI    V Y SL     +AG+    + +L DM  R ++  +  +      + 
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 309

Query: 560 KDNEILDL--FWSHVVDRGL 577
           K+ ++ +    +  ++ RG+
Sbjct: 310 KEGKLQEANELYKEMITRGI 329


>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial; Flags: Precursor
          Length = 602

 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 105/340 (30%), Positives = 186/340 (54%), Gaps = 2/340 (0%)

Query: 190 KMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKG 249
           +MV+ G   ++  YN +++  C+S D      LL +ME ++V+AD+FTY+T+I   C+ G
Sbjct: 183 RMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDG 242

Query: 250 MHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYT 307
               A+++   ME +GI   +VTYNSL+ G C+ G+  +   L +D+  +   PN +T+ 
Sbjct: 243 CIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFN 302

Query: 308 TLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEK 367
            L+D + +   L+EA  L + M  +G+ P ++TYN+++   C + R+ +AN +L+ M   
Sbjct: 303 VLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRN 362

Query: 368 KIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIA 427
           K +PD VT  +LI  YC +      MKV   + + GL+ +  TY  L+ GFC++ ++ +A
Sbjct: 363 KCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLA 422

Query: 428 KELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRR 487
           +EL   M+  G  P   +Y  L+DG C+    E  L++ ++     + + + +Y  +I  
Sbjct: 423 EELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEG 482

Query: 488 FCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
            CK  KV+ A  LF  +   G+  + + YT +     + G
Sbjct: 483 MCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKG 522



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 124/428 (28%), Positives = 214/428 (50%), Gaps = 16/428 (3%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D + +F +M     +P L   +   +++A+ +  ++V    K++   G+  NI+  N++I
Sbjct: 71  DAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMI 130

Query: 208 HA---CCKS----SDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDR 260
           +    CCK+    S + KV KL  E        D  T+NTLI     +G   EA+ + DR
Sbjct: 131 NCFCRCCKTCFAYSVLGKVMKLGYE-------PDTTTFNTLIKGLFLEGKVSEAVVLVDR 183

Query: 261 MEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRAND 318
           M   G  PD+VTYNS+++G CR G    A  L R +  +    +  TY+T+ID  CR   
Sbjct: 184 MVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGC 243

Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT 378
           ++ A+ L + M  KG+   VVTYNS++R LCK G+  D   LL +M  ++I P+ +T N 
Sbjct: 244 IDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNV 303

Query: 379 LINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAG 438
           L++ + K G    A ++   M+  G+  +  TY  L+ G+C    +  A  +L  M+   
Sbjct: 304 LLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNK 363

Query: 439 FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQ 498
            SP   +++ L+ GYC     +  +K+      RGL  +   Y  L++ FC+  K+  A+
Sbjct: 364 CSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAE 423

Query: 499 RLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASY 558
            LF  M  +G+L D + Y  L       G+ +   +I +D+ + ++ + + +Y +     
Sbjct: 424 ELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGM 483

Query: 559 AKDNEILD 566
            K  ++ D
Sbjct: 484 CKGGKVED 491



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 116/468 (24%), Positives = 230/468 (49%), Gaps = 16/468 (3%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           SVL  ++K+  +PD  +       +F        + + + D+M  +   P +     ++N
Sbjct: 144 SVLGKVMKLGYEPDTTTFNTLIKGLFLEG--KVSEAVVLVDRMVENGCQPDVVTYNSIVN 201

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
            + +   T +   + +KM +  V A++  Y+ +I + C+   +D    L  EME K +++
Sbjct: 202 GICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKS 261

Query: 234 DLFTYNTLIALYCKKGMHYE-ALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRL 292
            + TYN+L+   CK G   + AL ++D + RE I P+++T+N L+  F +EG+++EA  L
Sbjct: 262 SVVTYNSLVRGLCKAGKWNDGALLLKDMVSRE-IVPNVITFNVLLDVFVKEGKLQEANEL 320

Query: 293 FRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
           ++++  +G +PN +TY TL+DGYC  N L EA  + ++M      P +VT+ S+++  C 
Sbjct: 321 YKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCM 380

Query: 351 EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
             R+ D  ++   ++++ +  + VT + L+  +C+ G    A ++   M+  G++ D  T
Sbjct: 381 VKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMT 440

Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFV 470
           Y  L+ G C   +++ A E+   +  +        Y+ +++G C     E    L     
Sbjct: 441 YGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLP 500

Query: 471 SRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPK 530
            +G+  +V  Y  +I   CKK  +  A  L   M+ +G   +   Y +L  A+ R G+  
Sbjct: 501 CKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLT 560

Query: 531 ACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLM 578
           A + ++++M              FSA  +    ++D+  S  +D+  +
Sbjct: 561 ASAKLIEEMKS----------CGFSADASSIKMVIDMLLSGELDKSFL 598



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 98/396 (24%), Positives = 185/396 (46%), Gaps = 19/396 (4%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHV 132
           N K  + ++ T+I  L ++    +A ++ +++  +   S+    N+LV+      G    
Sbjct: 223 NVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVR------GLCKA 276

Query: 133 LSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMV 192
             W            DG  +   M    ++P++    VLL+   K+       ++YK+M+
Sbjct: 277 GKW-----------NDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMI 325

Query: 193 QLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHY 252
             G+  NI  YN L+   C  + + +   +L  M       D+ T+ +LI  YC      
Sbjct: 326 TRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVD 385

Query: 253 EALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLI 310
           + + V   + + G+  + VTY+ L+ GFC+ G+++ A  LF+++   G  P+ +TY  L+
Sbjct: 386 DGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILL 445

Query: 311 DGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIA 370
           DG C    LE+AL + E +    +  G+V Y +I+  +CK G++ DA  L   +  K + 
Sbjct: 446 DGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVK 505

Query: 371 PDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL 430
           P+ +T   +I+  CK G  + A  +  +M E G   +  TY  LI    +  ++  + +L
Sbjct: 506 PNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKL 565

Query: 431 LFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLL 466
           +  M   GFS    S   ++D   +   +++ L +L
Sbjct: 566 IEEMKSCGFSADASSIKMVIDMLLSGELDKSFLDML 601



 Score = 82.0 bits (201), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 59/260 (22%), Positives = 113/260 (43%), Gaps = 2/260 (0%)

Query: 320 EEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTL 379
           ++A+ L + M      P +V ++     + +  +         ++    IA +  T N +
Sbjct: 70  DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129

Query: 380 INAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGF 439
           IN +C+   T  A  V  ++++ G   D  T+  LI G     ++  A  L+  M++ G 
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189

Query: 440 SPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQR 499
            P   +Y+ +V+G C   +    L LL +   R +  DV  Y  +I   C+   +D A  
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249

Query: 500 LFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYA 559
           LF  M+  GI    V Y SL     +AG+    + +L DM  R ++  +  +      + 
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 309

Query: 560 KDNEILDL--FWSHVVDRGL 577
           K+ ++ +    +  ++ RG+
Sbjct: 310 KEGKLQEANELYKEMITRGI 329


>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 112/365 (30%), Positives = 197/365 (53%), Gaps = 6/365 (1%)

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
           D++ +V   +VQ     N+ +YN +I + CK   V++   L  EM  K +  D+ TY+ L
Sbjct: 211 DLLQRVDGNLVQ----PNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSAL 266

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGA 299
           I+ +C  G   +A+ + ++M  E I PD+ T+N L++ FC++G+M+E + +F  +  +G 
Sbjct: 267 ISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGI 326

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
            PN VTY +L+DGYC   ++ +A  +   MA  GV P + +Y+ ++   CK  +  +A  
Sbjct: 327 KPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMN 386

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
           L  EM+ K I PD VT ++LI+   K G  + A+++ ++M + G+  +  TY +++   C
Sbjct: 387 LFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALC 446

Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
           K  ++D A  LL    D GF P   +YS L+ G C     E   K+ ++ + +G  +DV 
Sbjct: 447 KTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVY 506

Query: 480 VYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
            Y  +I+ FC +   + A  L + M+ NG + D+  Y  +  + ++  E      +L +M
Sbjct: 507 AYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREM 566

Query: 540 YRRRL 544
             R L
Sbjct: 567 IARGL 571



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 111/374 (29%), Positives = 183/374 (48%), Gaps = 2/374 (0%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D + +F+++   N  P       +L SL K +    V  + +KM   G+  N+   N+LI
Sbjct: 68  DAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILI 127

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           +  C+   +     +  ++       D  T+ TL    C KG   +A    D++   G  
Sbjct: 128 NCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGFH 187

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDIKG--ATPNHVTYTTLIDGYCRANDLEEALRL 325
            D ++Y +LIHG C+ G  R A  L + + G    PN V Y T+ID  C+   + EA  L
Sbjct: 188 FDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDL 247

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
              M +KG+ P VVTY++++   C  G+++DA  L N+M  + I PD  T N L+NA+CK
Sbjct: 248 FSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCK 307

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            G       V + M++ G+  +  TY +L+ G+C  KE++ AK +   M   G +P   S
Sbjct: 308 DGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQS 367

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           YS +++G+C     +  + L  E   + +  DV  Y +LI    K  ++ YA +L + M 
Sbjct: 368 YSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMH 427

Query: 506 GNGILGDSVIYTSL 519
             G+  +   Y S+
Sbjct: 428 DRGVPPNICTYNSI 441



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 127/494 (25%), Positives = 226/494 (45%), Gaps = 21/494 (4%)

Query: 88  LTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQ 147
           L K+KH+ +   + +K+  R     P+++N                + L+  +  L +  
Sbjct: 95  LVKSKHYHTVLYLSQKMEFRGI--KPNLVNC---------------NILINCFCQLGLIP 137

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
               VF ++     +P     T L   L         +  + K+V LG   +   Y  LI
Sbjct: 138 FAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLI 197

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           H  CK  +      LL  ++   V+ ++  YNT+I   CK  +  EA  +   M  +GIS
Sbjct: 198 HGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGIS 257

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEALRL 325
           PD+VTY++LI GFC  G++++A  LF    ++   P+  T+  L++ +C+   ++E   +
Sbjct: 258 PDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTV 317

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
            ++M  +G+ P  VTYNS++   C    +  A  + N M +  + PD  + + +IN +CK
Sbjct: 318 FDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCK 377

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
           I     AM +   M    ++ D  TY +LI G  K+  +  A +L+  M D G  P+ C+
Sbjct: 378 IKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICT 437

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+ ++D  C  +  +  + LL +F  +G   D+S Y  LI+  C+  K++ A+++F  + 
Sbjct: 438 YNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLL 497

Query: 506 GNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAK--DNE 563
             G   D   YT +   +   G       +L  M     +   K Y     S  K  +N+
Sbjct: 498 VKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDEND 557

Query: 564 ILDLFWSHVVDRGL 577
           + +     ++ RGL
Sbjct: 558 MAEKLLREMIARGL 571



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 116/387 (29%), Positives = 193/387 (49%), Gaps = 15/387 (3%)

Query: 203 YNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRME 262
           +N ++ +  KS     V  L  +MEF+ ++ +L   N LI  +C+ G+   A +V  ++ 
Sbjct: 88  FNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKIL 147

Query: 263 REGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGATPNH---VTYTTLIDGYCRANDL 319
           + G  PD +T+ +L  G C +G++++A  LF D   A   H   ++Y TLI G C+  + 
Sbjct: 148 KMGYVPDTITFTTLSKGLCLKGQIQQAF-LFHDKVVALGFHFDQISYGTLIHGLCKVGET 206

Query: 320 EEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTL 379
             AL L + +    V P VV YN+I+  +CK   + +A  L +EM  K I+PD VT + L
Sbjct: 207 RAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSAL 266

Query: 380 INAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGF 439
           I+ +C +G    A+ + N+M+   +  D +T+  L++ FCK  +M   K +   M+  G 
Sbjct: 267 ISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGI 326

Query: 440 SPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQR 499
            P++ +Y+ L+DGYC          + +     G+  D+  Y  +I  FCK +K D A  
Sbjct: 327 KPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMN 386

Query: 500 LFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYA 559
           LF  M    I+ D V Y+SL     ++G       ++D M+ R +   +  Y        
Sbjct: 387 LFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTY-------- 438

Query: 560 KDNEILD-LFWSHVVDRGLMSKHIFKE 585
             N ILD L  +H VD+ +     FK+
Sbjct: 439 --NSILDALCKTHQVDKAIALLTKFKD 463



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 79/264 (29%), Positives = 132/264 (50%), Gaps = 4/264 (1%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           ++G  VFD M    + P+      L++     +  +    ++  M Q GV  +I  Y+++
Sbjct: 312 KEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIM 371

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           I+  CK    D+   L  EM  K++  D+ TY++LI    K G    AL + D+M   G+
Sbjct: 372 INGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGV 431

Query: 267 SPDIVTYNSLIHGFCREGRMREARRL---FRDIKGATPNHVTYTTLIDGYCRANDLEEAL 323
            P+I TYNS++   C+  ++ +A  L   F+D KG  P+  TY+ LI G C++  LE+A 
Sbjct: 432 PPNICTYNSILDALCKTHQVDKAIALLTKFKD-KGFQPDISTYSILIKGLCQSGKLEDAR 490

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
           ++ E +  KG    V  Y  +++  C EG   +A  LL++M +    PD  T   +I + 
Sbjct: 491 KVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSL 550

Query: 384 CKIGDTASAMKVKNRMLEAGLMLD 407
            K  +   A K+   M+  GL L+
Sbjct: 551 FKKDENDMAEKLLREMIARGLPLN 574



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 76/298 (25%), Positives = 124/298 (41%), Gaps = 2/298 (0%)

Query: 269 DIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLR 326
           + ++Y+S    F     + +A  LF  +  +  TP    +  ++    ++      L L 
Sbjct: 49  NFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLS 108

Query: 327 EVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKI 386
           + M  +G+ P +V  N ++   C+ G I  A  +  ++ +    PD +T  TL    C  
Sbjct: 109 QKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLK 168

Query: 387 GDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSY 446
           G    A    ++++  G   DQ +Y  LIHG CK  E   A +LL  +      P+   Y
Sbjct: 169 GQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMY 228

Query: 447 SWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQG 506
           + ++D  C          L  E VS+G+  DV  Y ALI  FC   K+  A  LFN M  
Sbjct: 229 NTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMIL 288

Query: 507 NGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
             I  D   +  L  A+ + G+ K    + D M ++ +      Y S    Y    E+
Sbjct: 289 ENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEV 346



 Score = 43.5 bits (101), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 40/193 (20%), Positives = 76/193 (39%), Gaps = 4/193 (2%)

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
           D   A+ + NR+L        F +  ++    K+K       L   M   G  P+  + +
Sbjct: 65  DVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCN 124

Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGN 507
            L++ +C          +  + +  G   D   +  L +  C K ++  A    + +   
Sbjct: 125 ILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVAL 184

Query: 508 GILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAK---DNEI 564
           G   D + Y +L +   + GE +A  D+L  +    +   + +Y +   S  K    NE 
Sbjct: 185 GFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEA 244

Query: 565 LDLFWSHVVDRGL 577
            DLF S +V +G+
Sbjct: 245 FDLF-SEMVSKGI 256


>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
 gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
          Length = 762

 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 125/431 (29%), Positives = 211/431 (48%), Gaps = 5/431 (1%)

Query: 126 PDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVW 185
           PD N    + L+         +D  Q+FD+M      P +    +L++        +   
Sbjct: 258 PDKNVCSYNILLKVLCGAGRVEDARQLFDEMAS---PPDVVTYGILIHGYCALGELENAV 314

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
           K+   MV  GV  N  +Y  ++   C    V     ++ +M    V  D   Y T+++ +
Sbjct: 315 KLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGF 374

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNH 303
           C KG    A    D M+R+G++ D VTY +LI+G CR G ++EA ++ +++  +    + 
Sbjct: 375 CNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDE 434

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
           VTYT L+DGYC+   + EA ++   M  +GV P VVTY ++   LCK+G ++ AN LL+E
Sbjct: 435 VTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHE 494

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
           M+ K +  +  T N+LIN  CK G    AM+    M  AGL  D +TY  LI   CK+ E
Sbjct: 495 MSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGE 554

Query: 424 MDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRA 483
           +D A +LL  MLD G  P+  +Y+ L++G+C     E   KLL+  + + +  + + Y +
Sbjct: 555 LDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNS 614

Query: 484 LIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRR 543
           L++++C    +     ++  M    +  +   Y  L   + +A   K      ++M  + 
Sbjct: 615 LMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKG 674

Query: 544 LMITLKIYRSF 554
             +T   Y + 
Sbjct: 675 FRLTASSYSAL 685



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 123/410 (30%), Positives = 205/410 (50%), Gaps = 11/410 (2%)

Query: 116 LNALVKIHDD-----PDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTV 170
           L   VK+ DD      + N+ V + +V    +     D L V + M  H ++      T 
Sbjct: 310 LENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTT 369

Query: 171 LLNSLAK--DRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEF 228
           +L+      D ++   W  + +M + G+  +   Y  LI+  C++ ++ + EK+L EM  
Sbjct: 370 VLSGFCNKGDLVSARRW--FDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLA 427

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
           + +  D  TY  L+  YCK+G   EA  V + M + G++P++VTY +L  G C++G ++ 
Sbjct: 428 RRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQA 487

Query: 289 ARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILR 346
           A  L  ++  KG   N  TY +LI+G C+A  L++A+R    M A G+ P V TY +++ 
Sbjct: 488 ANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLID 547

Query: 347 KLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLML 406
            LCK G +  A+ LL EM +  I P  VT N L+N +C  G      K+   MLE  +  
Sbjct: 548 ALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHP 607

Query: 407 DQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLL 466
           +  TY +L+  +C    M    E+  GM      P+  +Y+ L+ G+C   + +      
Sbjct: 608 NATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFH 667

Query: 467 DEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIY 516
           +E + +G  +  S Y ALIR   KK+K   A++LF+ M+  G   +  +Y
Sbjct: 668 NEMIEKGFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVY 717



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 98/304 (32%), Positives = 149/304 (49%), Gaps = 2/304 (0%)

Query: 169 TVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEF 228
           TVL++   K       ++V+  MVQ GV  N+  Y  L    CK  DV    +LL EM  
Sbjct: 438 TVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSN 497

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
           K +  +  TYN+LI   CK G   +A+     M+  G+ PD+ TY +LI   C+ G +  
Sbjct: 498 KGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDR 557

Query: 289 ARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILR 346
           A  L +++   G  P  VTY  L++G+C +  +E   +L E M  K ++P   TYNS+++
Sbjct: 558 AHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMK 617

Query: 347 KLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLML 406
           + C    ++    +   M  + + P+  T N LI  +CK      A    N M+E G  L
Sbjct: 618 QYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRL 677

Query: 407 DQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLL 466
              +Y ALI    K K+   A++L   M   GF+     Y++ +D   N++N EA L L 
Sbjct: 678 TASSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNFYIDFNFNEDNLEATLALC 737

Query: 467 DEFV 470
           DE V
Sbjct: 738 DELV 741



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 88/379 (23%), Positives = 159/379 (41%), Gaps = 59/379 (15%)

Query: 80  SHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIF 139
           ++ T+I+ L +    K A+ +L+++  R                   D +    + LV  
Sbjct: 401 TYTTLINGLCRAGELKEAEKVLQEMLARRL-----------------DVDEVTYTVLVDG 443

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
           Y       +  QV + M    + P++   T L + L K        ++  +M   G+  N
Sbjct: 444 YCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELN 503

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
              YN LI+  CK+  +D+  + + +M+   ++ D++TY TLI   CK G    A  +  
Sbjct: 504 ACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQ 563

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFR------------------------- 294
            M   GI P IVTYN L++GFC  GR+   ++L                           
Sbjct: 564 EMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGN 623

Query: 295 DIKGAT------------PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYN 342
           ++K  T            PN  TY  LI G+C+A  ++EA      M  KG      +Y+
Sbjct: 624 NMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSYS 683

Query: 343 SILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEA 402
           +++R L K+ +  +A +L ++M ++    +    N  I+      +  + + + + ++EA
Sbjct: 684 ALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNFYIDFNFNEDNLEATLALCDELVEA 743

Query: 403 GLM-----LDQFTYKALIH 416
            ++     +DQ   K  IH
Sbjct: 744 SIVKSKAEMDQDVVKDHIH 762



 Score = 46.6 bits (109), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 51/224 (22%), Positives = 85/224 (37%), Gaps = 17/224 (7%)

Query: 54  CHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTP 113
           C    L  A    A+      K  + ++ T+I  L K+     A ++L+++       T 
Sbjct: 515 CKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTI 574

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
              N L+        N   +S  V         + G ++ + M   N+ P+      L+ 
Sbjct: 575 VTYNVLM--------NGFCMSGRV---------EGGKKLLEWMLEKNIHPNATTYNSLMK 617

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
                       ++YK M    V  N + YN+LI   CK+  + + +    EM  K  R 
Sbjct: 618 QYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRL 677

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLI 277
              +Y+ LI L  KK    EA  +   M +EG + +   YN  I
Sbjct: 678 TASSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNFYI 721


>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
          Length = 667

 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 140/555 (25%), Positives = 257/555 (46%), Gaps = 38/555 (6%)

Query: 22  LKGHWAKLLNPNIASSL-TSTAIHKVLLNLYN------C-CHIPSLSCAFFKWAESAVPN 73
           L G   ++  P++  SL     + ++  N+Y+      C C    L  A   + +     
Sbjct: 82  LLGVVVRMERPDVVISLHRKMEMRRIPCNIYSFTILIKCFCSCSKLPFALSTFGKITKLG 141

Query: 74  YKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVK------------ 121
           +  SL +  T++H L        A +   +I   + ++  +++N L +            
Sbjct: 142 FHPSLVTFSTLLHGLCVEDRVSEALHFFHQICKPNVIAFTTLMNGLCREGRVVEAVALLD 201

Query: 122 --IHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMR-VHNLMPHLHACTVLLNSLAKD 178
             + D    N      +V     +  T   L +  +M  V  + P++   + +++ L KD
Sbjct: 202 RMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKD 261

Query: 179 -RLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFT 237
            R TD    ++ +M + G+  N+  YN +I+  C S    + ++LL EM  + +  D+ T
Sbjct: 262 GRQTD-AQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVT 320

Query: 238 YNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF--RD 295
           ++ LI    K+G  +EA  + + M   GI P+ +TYNS+I GF ++ R+  A R+F    
Sbjct: 321 FSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMA 380

Query: 296 IKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIR 355
            KG +P+ +T++ LIDGYC A  +++ ++L   M+ +G+    +TY +++   C+ G + 
Sbjct: 381 TKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLN 440

Query: 356 DANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQF------ 409
            A  LL EM    + P+ VTCNTL++  C  G    A+++   M ++ + LD        
Sbjct: 441 AALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDV 500

Query: 410 -----TYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLK 464
                TY  LI G     +   A+EL   M   G  P   +Y+ ++DG C ++  +   +
Sbjct: 501 EPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQ 560

Query: 465 LLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYW 524
           + D   S+G   DV  +  LI  +CK  +V     +F  M   GI+ +++ Y +L + + 
Sbjct: 561 MFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFC 620

Query: 525 RAGEPKACSDILDDM 539
           + G      DI  +M
Sbjct: 621 QVGNINGALDIFQEM 635



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 124/462 (26%), Positives = 211/462 (45%), Gaps = 52/462 (11%)

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
           P++ A T L+N L ++        +  +MV+ G+  N   Y  ++   CK  D      L
Sbjct: 175 PNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNL 234

Query: 223 LCEME-FKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFC 281
           L +ME    ++ ++  Y+ +I    K G   +A  +   M+ +GISP++ TYN +I+GFC
Sbjct: 235 LRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFC 294

Query: 282 REGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVV 339
             GR  EA+RL R++  +  +P+ VT++ LI+   +     EA  L   M  +G+ P  +
Sbjct: 295 SSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTI 354

Query: 340 TYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRM 399
           TYNS++    K+ R+  A R+   M  K  +PD +T + LI+ YC        MK+ + M
Sbjct: 355 TYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEM 414

Query: 400 LEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNE 459
              GL+ +  TY  LIHGFC+   ++ A +LL  M+ +G  P+  + + L+DG CN    
Sbjct: 415 SRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKL 474

Query: 460 EALLKLL----------------------------------------------DEFVSRG 473
           +  L++                                               +E   RG
Sbjct: 475 KDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRG 534

Query: 474 LCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACS 533
           L  D   Y ++I   CK+ ++D A ++F+ M   G   D V +T+L   Y + G      
Sbjct: 535 LVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGL 594

Query: 534 DILDDMYRRRLMITLKIYRSFSASYAKDNEI---LDLFWSHV 572
           ++  +M RR ++     YR+    + +   I   LD+F   +
Sbjct: 595 EVFCEMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQEMI 636



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 118/436 (27%), Positives = 212/436 (48%), Gaps = 15/436 (3%)

Query: 155 QMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSS 214
           +M +  +  ++++ T+L+               + K+ +LG   ++  ++ L+H  C   
Sbjct: 101 KMEMRRIPCNIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVED 160

Query: 215 DVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYN 274
            V +      ++     + ++  + TL+   C++G   EA+A+ DRM  +G+ P+ +TY 
Sbjct: 161 RVSEALHFFHQI----CKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYG 216

Query: 275 SLIHGFCREGRMREARRLFRDIKGAT---PNHVTYTTLIDGYCRANDLEEALRLREVMAA 331
           +++ G C+ G    A  L R ++  +   PN V Y+ +IDG  +     +A  L   M  
Sbjct: 217 TIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQE 276

Query: 332 KGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTAS 391
           KG+ P + TYN ++   C  GR  +A RLL EM E+K++PD VT + LINA  K G    
Sbjct: 277 KGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFE 336

Query: 392 AMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVD 451
           A ++ N ML  G++ +  TY ++I GF K   +D A+ + + M   G SP   ++S L+D
Sbjct: 337 AEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILID 396

Query: 452 GYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILG 511
           GYC     +  +KLL E   RGL  +   Y  LI  FC+   ++ A  L   M  +G+  
Sbjct: 397 GYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCP 456

Query: 512 DSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSH 571
           + V   +L       G+ K   ++   M + ++           AS+  ++   D+   +
Sbjct: 457 NVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKM--------DLDASHPFNDVEPDVQTYN 508

Query: 572 VVDRGLMSKHIFKEMQ 587
           ++  GL+++  F E +
Sbjct: 509 ILICGLINEGKFSEAE 524



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 108/408 (26%), Positives = 196/408 (48%), Gaps = 38/408 (9%)

Query: 66  WAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALR----DFLSTPSVLNALVK 121
           ++E        +L ++  MI+    +  +  AQ +L ++  R    D ++   ++NALVK
Sbjct: 271 FSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVK 330

Query: 122 IHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLT 181
                +G          F A         +++++M    ++P+      +++  +K    
Sbjct: 331 -----EGK--------FFEAE--------ELYNEMLPRGIIPNTITYNSMIDGFSKQNRL 369

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
           D   +++  M   G   ++  +++LI   C +  VD   KLL EM  + + A+  TY TL
Sbjct: 370 DAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTL 429

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGA-- 299
           I  +C+ G    AL +   M   G+ P++VT N+L+ G C  G++++A  +F+ ++ +  
Sbjct: 430 IHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKM 489

Query: 300 -----------TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
                       P+  TY  LI G        EA  L E M  +G+ P  +TYNS++  L
Sbjct: 490 DLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGL 549

Query: 349 CKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ 408
           CK+ R+ +A ++ + M  K  +PD VT  TLIN YCK+G     ++V   M   G++ + 
Sbjct: 550 CKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANA 609

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNK 456
            TY+ LIHGFC+   ++ A ++   M+ +G  P   +   ++ G  +K
Sbjct: 610 ITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSK 657



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 101/360 (28%), Positives = 170/360 (47%), Gaps = 13/360 (3%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           ++  +M    + P +   +VL+N+L K+       ++Y +M+  G++ N   YN +I   
Sbjct: 304 RLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGF 363

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
            K + +D  E++   M  K    D+ T++ LI  YC      + + +   M R G+  + 
Sbjct: 364 SKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANT 423

Query: 271 VTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
           +TY +LIHGFC+ G +  A  L +++   G  PN VT  TL+DG C    L++AL + +V
Sbjct: 424 ITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKV 483

Query: 329 MAAK-----------GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCN 377
           M               V P V TYN ++  L  EG+  +A  L  EM  + + PD +T N
Sbjct: 484 MQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYN 543

Query: 378 TLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA 437
           ++I+  CK      A ++ + M   G   D  T+  LI+G+CK   +    E+   M   
Sbjct: 544 SVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRR 603

Query: 438 GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYA 497
           G   +  +Y  L+ G+C   N    L +  E +S G+  D    R ++     KE++  A
Sbjct: 604 GIVANAITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRA 663



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 63/309 (20%), Positives = 120/309 (38%), Gaps = 36/309 (11%)

Query: 309 LIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKK 368
           L  G+     L++A+ L   M      P V+ +  +L  + +  R      L  +M  ++
Sbjct: 47  LQSGFHEIKGLDDAIDLFGYMVRSRPLPCVIDFCKLLGVVVRMERPDVVISLHRKMEMRR 106

Query: 369 IAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIH------------ 416
           I  +  +   LI  +C       A+    ++ + G      T+  L+H            
Sbjct: 107 IPCNIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEAL 166

Query: 417 -------------------GFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKN 457
                              G C+   +  A  LL  M++ G  P+  +Y  +VDG C   
Sbjct: 167 HFFHQICKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMG 226

Query: 458 NEEALLKLLD--EFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVI 515
           +  + L LL   E VSR +  +V +Y A+I    K  +   AQ LF+ MQ  GI  +   
Sbjct: 227 DTVSALNLLRKMEEVSR-IKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFT 285

Query: 516 YTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDL--FWSHVV 573
           Y  +   +  +G       +L +M+ R++   +  +     +  K+ +  +    ++ ++
Sbjct: 286 YNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEML 345

Query: 574 DRGLMSKHI 582
            RG++   I
Sbjct: 346 PRGIIPNTI 354


>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
          Length = 683

 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 125/441 (28%), Positives = 215/441 (48%), Gaps = 15/441 (3%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           + ++ +M    +   +++ T+L+               + K+ +LG+  ++  +  L+H 
Sbjct: 101 ISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHG 160

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
            C    V +   L  ++     R D+ T+ TL+   C++G   EA+A+ DRM   G+ PD
Sbjct: 161 LCLDHRVSEALDLFHQI----CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPD 216

Query: 270 IVTYNSLIHGFCREGRMREARRLFR---DIKGATPNHVTYTTLIDGYCRANDLEEALRLR 326
            +TY + + G C+ G    A  L R   +I    PN V Y+ +IDG C+     ++  L 
Sbjct: 217 QITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLF 276

Query: 327 EVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKI 386
             M  KG++P +VTYN ++   C  GR   A RLL EM E+KI+P+ VT N LINA+ K 
Sbjct: 277 IEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKE 336

Query: 387 GDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSY 446
           G    A ++ + ML  G++ +  TY ++I GFCK   +D A+++ + M   G SP   ++
Sbjct: 337 GKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTF 396

Query: 447 SWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQG 506
           + L+DGYC     +  ++LL E   RGL  +   Y  LI  FC    ++ A  L   M  
Sbjct: 397 TTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMIS 456

Query: 507 NGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
           +G+  D V   +L       G+ K   ++   M + ++           AS+  +    D
Sbjct: 457 SGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKM--------DLDASHPFNGVEPD 508

Query: 567 LFWSHVVDRGLMSKHIFKEMQ 587
           +   +++  GL+++  F E +
Sbjct: 509 VLTYNILICGLINEGKFLEAE 529



 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 134/525 (25%), Positives = 236/525 (44%), Gaps = 63/525 (12%)

Query: 83  TMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVK--------------IHDDPDG 128
           T++H L  +     A ++  +I   D L+  +++N L +              + +    
Sbjct: 156 TLLHGLCLDHRVSEALDLFHQICRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQP 215

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMR-VHNLMPHLHACTVLLNSLAKDRLTDMVWKV 187
           +       V     +  T   L +  +M  + ++ P++   + +++ L KD        +
Sbjct: 216 DQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNL 275

Query: 188 YKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCK 247
           + +M   G+  NI  YN +I   C S      ++LL EM  + +  ++ TYN LI  + K
Sbjct: 276 FIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVK 335

Query: 248 KGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF--RDIKGATPNHVT 305
           +G  +EA  + D M   GI P+ +TYNS+I GFC++ R+  A  +F     KG +P+  T
Sbjct: 336 EGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFT 395

Query: 306 YTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMN 365
           +TTLIDGYC A  +++ + L   M  +G+    VTYN+++   C  G +  A  L  +M 
Sbjct: 396 FTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMI 455

Query: 366 EKKIAPDNVTCNTLINAYCKIGDTASAMKV------------------------------ 395
              + PD VTCNTL++  C  G    A+++                              
Sbjct: 456 SSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNIL 515

Query: 396 ------KNRMLEA----------GLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGF 439
                 + + LEA          G++ D  TY ++I G CK   +D A ++   M    F
Sbjct: 516 ICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSF 575

Query: 440 SPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQR 499
           SP+  +++ L++GYC     +  L+L  E   RG+  D  +Y  LI  F K   ++ A  
Sbjct: 576 SPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALD 635

Query: 500 LFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL 544
           +F  M  +G+  D++   ++   +W   E +    +L+D+ R +L
Sbjct: 636 IFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQRYQL 680



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 107/369 (28%), Positives = 189/369 (51%), Gaps = 3/369 (0%)

Query: 187 VYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYC 246
           ++  M++   + ++  +N L+ A  +    D V  L  +ME K +R D++++  LI  +C
Sbjct: 68  LFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFC 127

Query: 247 KKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGATPNHVTY 306
                  AL+   ++ + G+ PD+VT+ +L+HG C + R+ EA  LF  I    P+ +T+
Sbjct: 128 SCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI--CRPDVLTF 185

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
           TTL++G CR   + EA+ L + M   G+ P  +TY + +  +CK G    A  LL +M E
Sbjct: 186 TTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEE 245

Query: 367 -KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMD 425
              I P+ V  + +I+  CK G  + +  +   M + G+  +  TY  +I GFC +    
Sbjct: 246 ISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWS 305

Query: 426 IAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
            A+ LL  ML+   SP+  +Y+ L++ +  +       +L DE + RG+  +   Y ++I
Sbjct: 306 AAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMI 365

Query: 486 RRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
             FCK++++D A+ +F LM   G   D   +T+L   Y  A       ++L +M RR L+
Sbjct: 366 DGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLV 425

Query: 546 ITLKIYRSF 554
                Y + 
Sbjct: 426 ANTVTYNTL 434



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 88/331 (26%), Positives = 152/331 (45%), Gaps = 11/331 (3%)

Query: 245 YCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPN 302
           Y  KG+  +A+ +   M R    P ++ +N L+    R  R      L++ +  K    +
Sbjct: 57  YEIKGLE-DAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCD 115

Query: 303 HVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLN 362
             ++T LI  +C  + L  AL     +   G++P VVT+ ++L  LC + R+ +A  L +
Sbjct: 116 IYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFH 175

Query: 363 EMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAK 422
           ++      PD +T  TL+N  C+ G    A+ + +RM+E GL  DQ TY   + G CK  
Sbjct: 176 QI----CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMG 231

Query: 423 EMDIAKELLFGMLD-AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVY 481
           +   A  LL  M + +   P+   YS ++DG C          L  E   +G+  ++  Y
Sbjct: 232 DTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTY 291

Query: 482 RALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
             +I  FC   +   AQRL   M    I  + V Y +L  A+ + G+    +++ D+M  
Sbjct: 292 NCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLP 351

Query: 542 RRLMITLKIYRSFSASYAKDNEI---LDLFW 569
           R ++     Y S    + K + +    D+F+
Sbjct: 352 RGIIPNTITYNSMIDGFCKQDRLDAAEDMFY 382



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 67/299 (22%), Positives = 121/299 (40%), Gaps = 36/299 (12%)

Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT 378
           LE+A+ L   M      P V+ +N ++  + +  R      L  +M  K+I  D  +   
Sbjct: 62  LEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTI 121

Query: 379 LINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC----KAKEMDI-------- 426
           LI  +C       A+    ++ + GL  D  T+  L+HG C     ++ +D+        
Sbjct: 122 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICRPD 181

Query: 427 -------------------AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLD 467
                              A  LL  M++ G  P   +Y   VDG C   +  + L LL 
Sbjct: 182 VLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLR 241

Query: 468 --EFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWR 525
             E +S  +  +V +Y A+I   CK  +   +  LF  MQ  GI  + V Y  +   +  
Sbjct: 242 KMEEISH-IKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCI 300

Query: 526 AGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDL--FWSHVVDRGLMSKHI 582
           +G   A   +L +M  R++   +  Y +   ++ K+ +  +    +  ++ RG++   I
Sbjct: 301 SGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTI 359


>gi|255541015|ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550687|gb|EEF52174.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 735

 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 134/449 (29%), Positives = 240/449 (53%), Gaps = 32/449 (7%)

Query: 156 MRVHNLMP----HLHA---CTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIH 208
           +R+ N MP     L+A   CTV+ +   ++      ++++ KM++LG+  +I  +N L+H
Sbjct: 166 LRLLNNMPSQGCELNAVVYCTVI-SGFYEENYQVEAYELFNKMLRLGIFPHIATFNKLMH 224

Query: 209 ACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMH-------YEALAVQDRM 261
             CK   + + EKLL ++    V  +LFT+N  I   C+KG+         EA     +M
Sbjct: 225 ILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKM 284

Query: 262 EREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDL 319
             +G+ PD  TYN++I+G+ + G++++A R+ +D   KG  P+  TY +LI G C+  D+
Sbjct: 285 VNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDI 344

Query: 320 EEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTL 379
           + AL L E    KG+ P +V YN++++ L ++G +  A +L+N+M+++ ++PD  T N +
Sbjct: 345 DHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLV 404

Query: 380 INAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGF 439
           IN  CK+G  + A  + N  +  G + D FT+  LI G+CK  +MD A  +L  M   G 
Sbjct: 405 INGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGV 464

Query: 440 SPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQR 499
           +P   +Y+ +++G C     E +++     + +G   ++  Y  LI   CK  KV  A  
Sbjct: 465 TPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALD 524

Query: 500 LFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR--RRLMITLKIYRSFSAS 557
           L   ++  G++ D V + ++   +   G+       LD+ Y+  RR+    +I  +  A+
Sbjct: 525 LLEEIRNRGLIPDPVSFGTVISGFCNNGD-------LDEAYQLFRRMEQQYRICHTV-AT 576

Query: 558 YAKDNEILDLFWSHVVDRGLMSKHIFKEM 586
           Y   N +++ F S  +D   M++ +F EM
Sbjct: 577 Y---NIMINAF-SEKLDMD-MAQKLFHEM 600



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 135/460 (29%), Positives = 222/460 (48%), Gaps = 27/460 (5%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNML-----EKIA---------LRDFLSTPSVLNA 118
           N + S+ S+  +++IL +  +F  A  +      E IA         ++ F  T   L A
Sbjct: 106 NCEPSIFSYNAIMNILVEYGYFNQAHKVYLRMKHEGIAPDVCTFTIRIKSFCRTKRPLAA 165

Query: 119 LVKIHDDPDG----NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNS 174
           L  +++ P      N+ V   ++  +       +  ++F++M    + PH+     L++ 
Sbjct: 166 LRLLNNMPSQGCELNAVVYCTVISGFYEENYQVEAYELFNKMLRLGIFPHIATFNKLMHI 225

Query: 175 LAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCK-------SSDVDKVEKLLCEME 227
           L K        K+  K+++ GV  N+  +N+ I   C+       +S V + E  L +M 
Sbjct: 226 LCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMV 285

Query: 228 FKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMR 287
            K +  D FTYNT+I  Y K G   +A  +    + +G  PD  TY SLI G C++G + 
Sbjct: 286 NKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDID 345

Query: 288 EARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSIL 345
            A  LF +   KG  P+ V Y TLI G  +   + +AL+L   M+ +G+ P + TYN ++
Sbjct: 346 HALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVI 405

Query: 346 RKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLM 405
             LCK G + DAN LLN    K   PD  T NTLI+ YCK     +A+ + + M   G+ 
Sbjct: 406 NGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVT 465

Query: 406 LDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKL 465
            D  TY ++++G CKA + +   E    +++ G  P+  +Y+ L++  C        L L
Sbjct: 466 PDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDL 525

Query: 466 LDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           L+E  +RGL  D   +  +I  FC    +D A +LF  M+
Sbjct: 526 LEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRME 565



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 131/522 (25%), Positives = 234/522 (44%), Gaps = 29/522 (5%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHV 132
            +KH+  ++  MI  L  +  F + + +L ++ L       +V N+L++          V
Sbjct: 35  GFKHTFLTYKRMIEKLGFHGEFDAMERVLMEMRL-------NVDNSLLE---------GV 78

Query: 133 LSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMV 192
               +  Y      Q+ + VF++M  +N  P + +   ++N L +    +   KVY +M 
Sbjct: 79  YVSAMRNYGRKGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRMK 138

Query: 193 QLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHY 252
             G+  ++  + + I + C++       +LL  M  +    +   Y T+I+ + ++    
Sbjct: 139 HEGIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEENYQV 198

Query: 253 EALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLI 310
           EA  + ++M R GI P I T+N L+H  C++G ++E  +L   +   G  PN  T+   I
Sbjct: 199 EAYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFI 258

Query: 311 DGYCRANDLE-------EALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
            G CR   LE       EA      M  KG+ P   TYN+I+    K G+I+DA+R+L +
Sbjct: 259 QGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKD 318

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
              K   PD  T  +LI   C+ GD   A+ +    L  GL      Y  LI G  +   
Sbjct: 319 AKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGL 378

Query: 424 MDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRA 483
           +  A +L+  M   G SP   +Y+ +++G C          LL+  +++G   D+  +  
Sbjct: 379 VLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNT 438

Query: 484 LIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRR 543
           LI  +CK+ K+D A  + + M  +G+  D + Y S+     +A +P+   +    +  + 
Sbjct: 439 LIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKG 498

Query: 544 LMITLKIYRSFSASYAKD---NEILDLFWSHVVDRGLMSKHI 582
            +  +  Y     S  K     E LDL    + +RGL+   +
Sbjct: 499 CLPNIITYNILIESLCKARKVTEALDLL-EEIRNRGLIPDPV 539



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 111/462 (24%), Positives = 220/462 (47%), Gaps = 32/462 (6%)

Query: 84  MIHILTKNKHFKSAQNMLEKI---------------------------ALRDFLSTPSVL 116
           ++HIL K  H +  + +L K+                           A    +   + L
Sbjct: 222 LMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYL 281

Query: 117 NALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLA 176
           + +V    +PD  ++  + ++  Y+ +   QD  ++    +    +P       L+  + 
Sbjct: 282 HKMVNKGLEPDDFTY--NTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVC 339

Query: 177 KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLF 236
           +D   D    ++++ +  G+  +I LYN LI    +   V K  +L+ +M  + +  D++
Sbjct: 340 QDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIW 399

Query: 237 TYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI 296
           TYN +I   CK G   +A  + +    +G  PDI T+N+LI G+C+  +M  A  +   +
Sbjct: 400 TYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSM 459

Query: 297 --KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRI 354
              G TP+ +TY ++++G C+A   E+ +   +++  KG  P ++TYN ++  LCK  ++
Sbjct: 460 WSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKV 519

Query: 355 RDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQF-TYKA 413
            +A  LL E+  + + PD V+  T+I+ +C  GD   A ++  RM +   +     TY  
Sbjct: 520 TEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRICHTVATYNI 579

Query: 414 LIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
           +I+ F +  +MD+A++L   M D G  P   +Y  ++DG+C   N  +    L + +  G
Sbjct: 580 MINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGYDFLLKEIEIG 639

Query: 474 LCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVI 515
               ++ +  +I   C + +V  A  + +LM   G++ ++V+
Sbjct: 640 FVPSLTTFGRVINCLCVQHRVHEAVGIVHLMVRTGVVPEAVV 681



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 80/302 (26%), Positives = 143/302 (47%), Gaps = 27/302 (8%)

Query: 82  WT---MIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVI 138
           WT   +I+ L K      A N+L     + +L      N L+      DG          
Sbjct: 399 WTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLI------DG---------- 442

Query: 139 FYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVA 198
           +   LKM  + + + D M  H + P +     +LN L K    + V + +K +++ G + 
Sbjct: 443 YCKRLKM-DNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLP 501

Query: 199 NIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQ 258
           NI  YN+LI + CK+  V +   LL E+  + +  D  ++ T+I+ +C  G   EA  + 
Sbjct: 502 NIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLF 561

Query: 259 DRMERE-GISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCR 315
            RME++  I   + TYN +I+ F  +  M  A++LF ++  KG  P+  TY  +IDG+C+
Sbjct: 562 RRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCK 621

Query: 316 ANDLEEA--LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDN 373
             ++       L+E+    G  P + T+  ++  LC + R+ +A  +++ M    + P+ 
Sbjct: 622 VGNVNSGYDFLLKEIEI--GFVPSLTTFGRVINCLCVQHRVHEAVGIVHLMVRTGVVPEA 679

Query: 374 VT 375
           V 
Sbjct: 680 VV 681



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 77/323 (23%), Positives = 143/323 (44%), Gaps = 11/323 (3%)

Query: 253 EALAVQDRMERE-GISPDIVTYNSLIHGFCREGRMREARRLFRDIKGATPNHV---TYTT 308
           +AL++ + +++E G     +TY  +I      G      R+  +++    N +    Y +
Sbjct: 22  KALSIFNSVKKEDGFKHTFLTYKRMIEKLGFHGEFDAMERVLMEMRLNVDNSLLEGVYVS 81

Query: 309 LIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKK 368
            +  Y R   ++EA+ + E M      P + +YN+I+  L + G    A+++   M  + 
Sbjct: 82  AMRNYGRKGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRMKHEG 141

Query: 369 IAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAK 428
           IAPD  T    I ++C+     +A+++ N M   G  L+   Y  +I GF +      A 
Sbjct: 142 IAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEENYQVEAY 201

Query: 429 ELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRF 488
           EL   ML  G  P   +++ L+   C K + +   KLL++ +  G+C ++  +   I+  
Sbjct: 202 ELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGL 261

Query: 489 CKK-------EKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
           C+K        KV  A+   + M   G+  D   Y ++ Y Y + G+ +  S IL D   
Sbjct: 262 CRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKF 321

Query: 542 RRLMITLKIYRSFSASYAKDNEI 564
           +  +     Y S      +D +I
Sbjct: 322 KGFVPDEFTYCSLIIGVCQDGDI 344


>gi|297849294|ref|XP_002892528.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338370|gb|EFH68787.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 606

 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 142/555 (25%), Positives = 268/555 (48%), Gaps = 30/555 (5%)

Query: 14  IKTISAIMLKGHWAKL------LNPN-IASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKW 66
           +  I+ ++ K HW+KL      +NPN +   L S+ ++            P L   ++ W
Sbjct: 43  VAVIADLIEKQHWSKLGFHVKDINPNELFRQLISSELN------------PDLCLRYYTW 90

Query: 67  AESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDP 126
                 +   SL+  + ++H L   K +   ++ L+             +   + + D+ 
Sbjct: 91  LVKN-RDISVSLELTFKLLHSLANAKRYSKIRSFLDGFVRNGSDHQVHSIFHAISMCDNV 149

Query: 127 DGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWK 186
             NS +   LV+ YAN    + G + F +   +       +C  L+ +L K   +  V  
Sbjct: 150 CVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSAMSCKPLMVALLKQNRSADVEY 209

Query: 187 VYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYC 246
           +YK+M++  +  N+  +NV+I+A CK+  ++K   ++ +M+      ++ +YNTLI  YC
Sbjct: 210 LYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYC 269

Query: 247 K---KGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATP 301
           K    G  Y+A AV   M    +SP++ T+N LI GF ++  +  + ++F+++  +   P
Sbjct: 270 KLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIP 329

Query: 302 NHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLL 361
           N +TY +LI+G C    + EA+ +R+ M + GV P ++TY+S++   CK G +++A  + 
Sbjct: 330 NVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMF 389

Query: 362 NEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKA 421
           + +  +   P     N LI+AYCK+G       +K  M   G++ D  TY  LI G C+ 
Sbjct: 390 DSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRN 449

Query: 422 KEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVY 481
             ++ AK+L   + + G  P   ++  L++GYC++        LL E    GL      Y
Sbjct: 450 GNIEAAKKLFDQLTNKGL-PDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTY 508

Query: 482 RALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVI-YTSLAYAYWRAGEPKACSDILDDMY 540
             +++ +CK+  +  A  +   M+    L  +V  Y  L   Y + G+ +  + +L++M 
Sbjct: 509 NIMMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEML 568

Query: 541 RRRLM---ITLKIYR 552
            + L+   IT +I +
Sbjct: 569 EKGLVPNRITYEIVK 583



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 64/258 (24%), Positives = 123/258 (47%), Gaps = 15/258 (5%)

Query: 102 EKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNL 161
           E I +RD + +  V   L+  H            L+  +    M ++ L +FD ++    
Sbjct: 349 EAIGMRDKMVSAGVQPNLITYHS-----------LINGFCKNGMMKEALDMFDSVKGQGT 397

Query: 162 MPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEK 221
            P      +L+++  K    D  + + ++M + G+V ++  YN LI   C++ +++  +K
Sbjct: 398 RPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKK 457

Query: 222 LLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFC 281
           L  ++  K +  DL T++ L+  YC +G   +A  +   M + G+ P  +TYN ++ G+C
Sbjct: 458 LFDQLTNKGL-PDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYC 516

Query: 282 REGRMREA---RRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGV 338
           +EG ++ A   R      +    N  +Y  L+ GY +   LE+A  L   M  KG+ P  
Sbjct: 517 KEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNR 576

Query: 339 VTYNSILRKLCKEGRIRD 356
           +TY  +  ++  +G + D
Sbjct: 577 ITYEIVKEEMVDKGFVPD 594


>gi|242041853|ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
 gi|241922175|gb|EER95319.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
          Length = 794

 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 126/412 (30%), Positives = 202/412 (49%), Gaps = 40/412 (9%)

Query: 157 RVHNLMPHLHACTVLLNSLAKDRLT--DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSS 214
           R  ++ P L A   +L++LA+   T       V++ ++ L +  N + +N+L+H  C   
Sbjct: 165 RRGHVRPSLQAANAVLSALARSPSTSPQASLDVFRSLIALRLHPNHYTFNLLVHTHCSKG 224

Query: 215 DVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYN 274
            +      L  M+   +  D+ TYNTL+  +C+KGM  EA  +  RM++EGI+P   TYN
Sbjct: 225 TLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTRATYN 284

Query: 275 SLIH-----------------------------------GFCREGRMREARRLFRDIKG- 298
           +L+                                    G C+ G++ EA +L  +++  
Sbjct: 285 TLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHL 344

Query: 299 --ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRD 356
              +P+ VTY TL+D   +     +AL L E M  KGV   +VT+N +++ LC+EG++ +
Sbjct: 345 SIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEE 404

Query: 357 ANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIH 416
           A   L  M E+ +APD +T NTLI+AYCK  + A A  + + M+ +GL +D FT   L++
Sbjct: 405 ALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLY 464

Query: 417 GFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCV 476
             CK K  + A+ELL      GF P   SY  ++  Y  +N  E  L L DE   R L  
Sbjct: 465 NLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTP 524

Query: 477 DVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
            +  Y  LI+  C   K+  A    N +   G++ D   Y  + +AY + G+
Sbjct: 525 SIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGD 576



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 122/404 (30%), Positives = 193/404 (47%), Gaps = 3/404 (0%)

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           LV  YA L   +    V + M      P L    VL   L +    D  +K+  +M  L 
Sbjct: 286 LVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLS 345

Query: 196 VVA-NIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEA 254
           +V+ ++  YN L+ AC K         LL EM  K V++ L T+N ++   C++G   EA
Sbjct: 346 IVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEA 405

Query: 255 LAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDG 312
           L     M  EG++PD++TYN+LI  +C+   + +A  L  ++   G   +  T  TL+  
Sbjct: 406 LGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYN 465

Query: 313 YCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPD 372
            C+    EEA  L      +G  P  V+Y +++    KE +   A  L +EM+++K+ P 
Sbjct: 466 LCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPS 525

Query: 373 NVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLF 432
             T NTLI   C IG    A+   N +++ GL+ D  TY  +IH +CK  +++ A +   
Sbjct: 526 IYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHN 585

Query: 433 GMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKE 492
            ML+  F P   + + L++G C     E  +KL + +  +G  VDV  Y  LI+  CK  
Sbjct: 586 KMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDG 645

Query: 493 KVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDIL 536
            VD A   F  M+  G+  D+  Y  +  A   AG  +   ++L
Sbjct: 646 DVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNML 689



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 106/385 (27%), Positives = 169/385 (43%), Gaps = 38/385 (9%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           ++ L     M    L P +     L+++  K R     + +  +MV+ G+  +    N L
Sbjct: 403 EEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTL 462

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           ++  CK    ++ E+LL     +    D  +Y T++A Y K+     AL + D M +  +
Sbjct: 463 LYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKL 522

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
           +P I TYN+LI G C  G++ EA     ++  KG  P+  TY  +I  YC+  DLE+A +
Sbjct: 523 TPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQ 582

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
               M      P VVT N+++  LC  G++  A +L     EK    D +T NTLI A C
Sbjct: 583 FHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALC 642

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAG-----F 439
           K GD  +A+     M   GL  D FTY  ++    +A   + A+ +L  + ++G     F
Sbjct: 643 KDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKLDESGKLSERF 702

Query: 440 S-------------------PSYC------------SYSWLVDGYCNKNNEEALLKLLDE 468
           S                    S C            SY+  V   C     +    +LDE
Sbjct: 703 SYPLIKSSAEEVKTGKDPEVKSDCESGGNAKGGDQESYNKSVKELCVGGQLKEAKAVLDE 762

Query: 469 FVSRGLCVDVSVYRALIRRFCKKEK 493
            + +G+ VD S Y  L+    K++K
Sbjct: 763 MMQKGMSVDSSTYITLMEGLIKRQK 787



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 85/343 (24%), Positives = 144/343 (41%), Gaps = 59/343 (17%)

Query: 83  TMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYAN 142
           T+++ L K K ++ A+ +L     R F+               PD  S+       F  N
Sbjct: 461 TLLYNLCKEKRYEEAEELLRSPPQRGFV---------------PDEVSYGTVMAAYFKEN 505

Query: 143 LKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAK-DRLTDMVWKVYKKMVQLGVVANIH 201
               +  L ++D+M    L P ++    L+  L    +LT+ + K+  ++++ G+V +  
Sbjct: 506 --KPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKL-NELMKKGLVPDDT 562

Query: 202 LYNVLIHACCKSSDVDKVEKL---LCEMEFK-DV-------------------------- 231
            YN++IHA CK  D++K  +    + E  FK DV                          
Sbjct: 563 TYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESW 622

Query: 232 -----RADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRM 286
                + D+ TYNTLI   CK G    AL     ME  G+ PD  TYN ++      GR 
Sbjct: 623 AEKGKKVDVITYNTLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRS 682

Query: 287 REARRLFR--DIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPG--VVTYN 342
            EA+ +    D  G      +Y  LI          +   ++    + G   G    +YN
Sbjct: 683 EEAQNMLHKLDESGKLSERFSY-PLIKSSAEEVKTGKDPEVKSDCESGGNAKGGDQESYN 741

Query: 343 SILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
             +++LC  G++++A  +L+EM +K ++ D+ T  TL+    K
Sbjct: 742 KSVKELCVGGQLKEAKAVLDEMMQKGMSVDSSTYITLMEGLIK 784


>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
          Length = 1245

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 105/340 (30%), Positives = 186/340 (54%), Gaps = 2/340 (0%)

Query: 190 KMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKG 249
           +MV+ G   ++  YN +++  C+S D      LL +ME ++V+AD+FTY+T+I   C+ G
Sbjct: 173 RMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDG 232

Query: 250 MHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYT 307
               A+++   ME +GI   +VTYNSL+ G C+ G+  +   L +D+  +   PN +T+ 
Sbjct: 233 CIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFN 292

Query: 308 TLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEK 367
            L+D + +   L+EA  L + M  +G+ P ++TYN+++   C + R+ +AN +L+ M   
Sbjct: 293 VLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRN 352

Query: 368 KIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIA 427
           K +PD VT  +LI  YC +      MKV   + + GL+ +  TY  L+ GFC++ ++ +A
Sbjct: 353 KCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLA 412

Query: 428 KELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRR 487
           +EL   M+  G  P   +Y  L+DG C+    E  L++ ++     + + + +Y  +I  
Sbjct: 413 EELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEG 472

Query: 488 FCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
            CK  KV+ A  LF  +   G+  + + YT +     + G
Sbjct: 473 MCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKG 512



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 124/428 (28%), Positives = 214/428 (50%), Gaps = 16/428 (3%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D + +F +M     +P L   +   +++A+ +  ++V    K++   G+  NI+  N++I
Sbjct: 61  DAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMI 120

Query: 208 HA---CCKS----SDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDR 260
           +    CCK+    S + KV KL  E        D  T+NTLI     +G   EA+ + DR
Sbjct: 121 NCFCRCCKTCFAYSVLGKVMKLGYE-------PDTTTFNTLIKGLFLEGKVSEAVVLVDR 173

Query: 261 MEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRAND 318
           M   G  PD+VTYNS+++G CR G    A  L R +  +    +  TY+T+ID  CR   
Sbjct: 174 MVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGC 233

Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT 378
           ++ A+ L + M  KG+   VVTYNS++R LCK G+  D   LL +M  ++I P+ +T N 
Sbjct: 234 IDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNV 293

Query: 379 LINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAG 438
           L++ + K G    A ++   M+  G+  +  TY  L+ G+C    +  A  +L  M+   
Sbjct: 294 LLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNK 353

Query: 439 FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQ 498
            SP   +++ L+ GYC     +  +K+      RGL  +   Y  L++ FC+  K+  A+
Sbjct: 354 CSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAE 413

Query: 499 RLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASY 558
            LF  M  +G+L D + Y  L       G+ +   +I +D+ + ++ + + +Y +     
Sbjct: 414 ELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGM 473

Query: 559 AKDNEILD 566
            K  ++ D
Sbjct: 474 CKGGKVED 481



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 110/429 (25%), Positives = 217/429 (50%), Gaps = 6/429 (1%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           SVL  ++K+  +PD  +       +F        + + + D+M  +   P +     ++N
Sbjct: 134 SVLGKVMKLGYEPDTTTFNTLIKGLFLEG--KVSEAVVLVDRMVENGCQPDVVTYNSIVN 191

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
            + +   T +   + +KM +  V A++  Y+ +I + C+   +D    L  EME K +++
Sbjct: 192 GICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKS 251

Query: 234 DLFTYNTLIALYCKKGMHYE-ALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRL 292
            + TYN+L+   CK G   + AL ++D + RE I P+++T+N L+  F +EG+++EA  L
Sbjct: 252 SVVTYNSLVRGLCKAGKWNDGALLLKDMVSRE-IVPNVITFNVLLDVFVKEGKLQEANEL 310

Query: 293 FRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
           ++++  +G +PN +TY TL+DGYC  N L EA  + ++M      P +VT+ S+++  C 
Sbjct: 311 YKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCM 370

Query: 351 EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
             R+ D  ++   ++++ +  + VT + L+  +C+ G    A ++   M+  G++ D  T
Sbjct: 371 VKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMT 430

Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFV 470
           Y  L+ G C   +++ A E+   +  +        Y+ +++G C     E    L     
Sbjct: 431 YGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLP 490

Query: 471 SRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPK 530
            +G+  +V  Y  +I   CKK  +  A  L   M+ +G   +   Y +L  A+ R G+  
Sbjct: 491 CKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLT 550

Query: 531 ACSDILDDM 539
           A + ++++M
Sbjct: 551 ASAKLIEEM 559



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 93/370 (25%), Positives = 184/370 (49%), Gaps = 2/370 (0%)

Query: 146 TQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNV 205
           T   L +  +M   N+   +   + +++SL +D   D    ++K+M   G+ +++  YN 
Sbjct: 199 TSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNS 258

Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
           L+   CK+   +    LL +M  +++  ++ T+N L+ ++ K+G   EA  +   M   G
Sbjct: 259 LVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRG 318

Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEAL 323
           ISP+I+TYN+L+ G+C + R+ EA  +   +     +P+ VT+T+LI GYC    +++ +
Sbjct: 319 ISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGM 378

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
           ++   ++ +G+    VTY+ +++  C+ G+I+ A  L  EM    + PD +T   L++  
Sbjct: 379 KVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGL 438

Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY 443
           C  G    A+++   + ++ + L    Y  +I G CK  +++ A  L   +   G  P+ 
Sbjct: 439 CDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNV 498

Query: 444 CSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNL 503
            +Y+ ++ G C K +      LL +    G   +   Y  LIR   +   +  + +L   
Sbjct: 499 MTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEE 558

Query: 504 MQGNGILGDS 513
           M+  G   D+
Sbjct: 559 MKSCGFSADA 568



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 101/343 (29%), Positives = 167/343 (48%), Gaps = 10/343 (2%)

Query: 149 GLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWK----VYKKMVQLGVVANIHLYN 204
            + +F +M    +     +  V  NSL +       W     + K MV   +V N+  +N
Sbjct: 237 AISLFKEMETKGI----KSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFN 292

Query: 205 VLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMERE 264
           VL+    K   + +  +L  EM  + +  ++ TYNTL+  YC +    EA  + D M R 
Sbjct: 293 VLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRN 352

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEA 322
             SPDIVT+ SLI G+C   R+ +  ++FR+I  +G   N VTY+ L+ G+C++  ++ A
Sbjct: 353 KCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLA 412

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
             L + M + GV P V+TY  +L  LC  G++  A  +  ++ + K+    V   T+I  
Sbjct: 413 EELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEG 472

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
            CK G    A  +   +   G+  +  TY  +I G CK   +  A  LL  M + G +P+
Sbjct: 473 MCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPN 532

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
            C+Y+ L+  +    +  A  KL++E  S G   D S  + +I
Sbjct: 533 DCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVI 575



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 96/381 (25%), Positives = 178/381 (46%), Gaps = 19/381 (4%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHV 132
           N K  + ++ T+I  L ++    +A ++ +++  +   S+    N+LV+      G    
Sbjct: 213 NVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVR------GLCKA 266

Query: 133 LSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMV 192
             W            DG  +   M    ++P++    VLL+   K+       ++YK+M+
Sbjct: 267 GKW-----------NDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMI 315

Query: 193 QLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHY 252
             G+  NI  YN L+   C  + + +   +L  M       D+ T+ +LI  YC      
Sbjct: 316 TRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVD 375

Query: 253 EALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLI 310
           + + V   + + G+  + VTY+ L+ GFC+ G+++ A  LF+++   G  P+ +TY  L+
Sbjct: 376 DGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILL 435

Query: 311 DGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIA 370
           DG C    LE+AL + E +    +  G+V Y +I+  +CK G++ DA  L   +  K + 
Sbjct: 436 DGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVK 495

Query: 371 PDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL 430
           P+ +T   +I+  CK G  + A  +  +M E G   +  TY  LI    +  ++  + +L
Sbjct: 496 PNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKL 555

Query: 431 LFGMLDAGFSPSYCSYSWLVD 451
           +  M   GFS    S   ++D
Sbjct: 556 IEEMKSCGFSADASSIKMVID 576



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/260 (22%), Positives = 113/260 (43%), Gaps = 2/260 (0%)

Query: 320 EEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTL 379
           ++A+ L + M      P +V ++     + +  +         ++    IA +  T N +
Sbjct: 60  DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 119

Query: 380 INAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGF 439
           IN +C+   T  A  V  ++++ G   D  T+  LI G     ++  A  L+  M++ G 
Sbjct: 120 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 179

Query: 440 SPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQR 499
            P   +Y+ +V+G C   +    L LL +   R +  DV  Y  +I   C+   +D A  
Sbjct: 180 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 239

Query: 500 LFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYA 559
           LF  M+  GI    V Y SL     +AG+    + +L DM  R ++  +  +      + 
Sbjct: 240 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 299

Query: 560 KDNEILDL--FWSHVVDRGL 577
           K+ ++ +    +  ++ RG+
Sbjct: 300 KEGKLQEANELYKEMITRGI 319



 Score = 48.1 bits (113), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 60/113 (53%), Gaps = 21/113 (18%)

Query: 277 IHGFCREGRMRE---------ARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
           +H   R GRMR          A  L +++  +G  PN +TY++LIDG+C+ N L+EA ++
Sbjct: 697 VHYAHRAGRMRRPGRKMTVVTAEELHKEMIQRGIAPNTITYSSLIDGFCKENRLDEANQM 756

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT 378
            ++M  KG        +S +R L   G +R   R  +E    +  PD+++C+T
Sbjct: 757 LDLMVTKG--------DSDIRYLLA-GLMR-KKRKGSETEGWENLPDDLSCST 799



 Score = 42.4 bits (98), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 17/40 (42%), Positives = 27/40 (67%)

Query: 254 ALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           A  +   M + GI+P+ +TY+SLI GFC+E R+ EA ++ 
Sbjct: 718 AEELHKEMIQRGIAPNTITYSSLIDGFCKENRLDEANQML 757


>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
          Length = 1088

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 131/410 (31%), Positives = 198/410 (48%), Gaps = 37/410 (9%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           +   D +    L   L A + LL  L++  +T  V   Y +M+  GV  N+ +YN +I+A
Sbjct: 335 MSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINA 394

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
            CK  +V   E ++ ++   ++  D FTY ++I  +C+K     AL V ++M +EG  P+
Sbjct: 395 LCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPN 454

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDI--------------------------------- 296
            VTY++LI+G C  GR+ EA  L R++                                 
Sbjct: 455 TVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFV 514

Query: 297 ----KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEG 352
               KG  PN  TYT LI G C +  L+ A+ L   M+  GV+P  VTYN+++  L +  
Sbjct: 515 DMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENR 574

Query: 353 RIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYK 412
           RI+ A  +LN M    +  + VT N +I  YC +GD   AM V N ML+ G   +  TY 
Sbjct: 575 RIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYN 634

Query: 413 ALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSR 472
            +I G+C +     A  +L  M D G  P   SY+ L+ G+C  +  E+   L +E V  
Sbjct: 635 TIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDD 694

Query: 473 GLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYA 522
           GLC +   Y ALI  +CK EK+D A  L   M+ +G   +   Y  L + 
Sbjct: 695 GLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHG 744



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 122/446 (27%), Positives = 210/446 (47%), Gaps = 4/446 (0%)

Query: 108 DFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHA 167
           D  S   V N + K   +P  N+   S L+    +     +   +  +M +H ++P  H 
Sbjct: 435 DLDSALQVFNQMAKEGCEP--NTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHT 492

Query: 168 CTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEME 227
           CT  + +L      +  W+++  M   G   N++ Y  LI   C S  +     L   M 
Sbjct: 493 CTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMS 552

Query: 228 FKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMR 287
              V  +  TYN LI +  +      A  V + M R G+  +IVTYN +I G+C  G  +
Sbjct: 553 RDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPK 612

Query: 288 EARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSIL 345
           +A  +  ++  +G + N VTY T+I GYC + +   ALR+ ++M   G  P   +Y  ++
Sbjct: 613 KAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELI 672

Query: 346 RKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLM 405
              CK  ++  A  L NEM +  + P+ VT   LI+ YCK     +A  +   M  +G  
Sbjct: 673 CGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCR 732

Query: 406 LDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKL 465
            +  TY  LIHG  K      A+EL   M++ G  P+  +Y+ ++DG C   +    L++
Sbjct: 733 PNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEM 792

Query: 466 LDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWR 525
            ++ + +G   ++  Y +LIR   ++ KV+ A+ LF  ++ +G++ D + Y  +  AY  
Sbjct: 793 FNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIM 852

Query: 526 AGEPKACSDILDDMYRRRLMITLKIY 551
           +G+ +   + L  M +     TL  Y
Sbjct: 853 SGKVEHAFNFLGRMIKAGCQPTLWTY 878



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 120/421 (28%), Positives = 202/421 (47%), Gaps = 2/421 (0%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           LQVF+QM      P+    + L+N L      +  + + ++M+  G++   H     I A
Sbjct: 440 LQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIA 499

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
            C     +   +L  +M+ K    +++TY  LI+  C  G+   A+ +  RM R+G+ P+
Sbjct: 500 LCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPN 559

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLRE 327
            VTYN+LI+      R++ A  +   +   G   N VTY  +I GYC   D ++A+ +  
Sbjct: 560 TVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMN 619

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
            M  +G    +VTYN+I++  C  G    A R+L+ M +    PD  +   LI  +CKI 
Sbjct: 620 NMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKIS 679

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
              SA  + N M++ GL  ++ TY ALI G+CK +++D A  LL  M  +G  P+  +Y+
Sbjct: 680 KMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYN 739

Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGN 507
            L+ G   +NN     +L    +  G+  +V  Y A+I   CK      A  +FN M   
Sbjct: 740 VLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQ 799

Query: 508 GILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDL 567
           G L + + Y+SL  A  + G+ +   ++  ++ R  L+     Y     +Y    ++   
Sbjct: 800 GCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHA 859

Query: 568 F 568
           F
Sbjct: 860 F 860



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 97/396 (24%), Positives = 176/396 (44%), Gaps = 37/396 (9%)

Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
           LI +C     + +    L  +    +R  LF Y+ L+    + GM    +    RM  EG
Sbjct: 321 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 380

Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEAL 323
           + P+++ YN++I+  C++G + +A  + + +     +P+  TYT++I G+CR +DL+ AL
Sbjct: 381 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 440

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
           ++   MA +G  P  VTY++++  LC  GR+ +A  L+ EM    I P   TC   I A 
Sbjct: 441 QVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIAL 500

Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY 443
           C +G    A ++   M   G   + +TY ALI G C +  + +A  L   M   G  P+ 
Sbjct: 501 CDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNT 560

Query: 444 CSYSWLVD-----------------------------------GYCNKNNEEALLKLLDE 468
            +Y+ L++                                   GYC   + +  + +++ 
Sbjct: 561 VTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNN 620

Query: 469 FVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
            + RG   ++  Y  +I+ +C       A R+ +LM+  G   D   YT L   + +  +
Sbjct: 621 MLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISK 680

Query: 529 PKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
            ++   + ++M    L      Y +    Y KD ++
Sbjct: 681 MESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKL 716



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 109/419 (26%), Positives = 166/419 (39%), Gaps = 61/419 (14%)

Query: 203  YNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRME 262
            Y  LI   CK S ++    L  EM    +  +  TY  LI  YCK      A ++ + M+
Sbjct: 668  YTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMK 727

Query: 263  REGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLE 320
            R G  P++ TYN LIHG  ++     A  L + +  +G  PN VTYT +IDG C+     
Sbjct: 728  RSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTS 787

Query: 321  EALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLI 380
             AL +   M  +G  P ++TY+S++R L +EG++ +A  L  E+    + PD +T   +I
Sbjct: 788  LALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMI 847

Query: 381  NAYCKIGDTASAMKVKNRMLEAG-------------------LMLDQ------------- 408
             AY   G    A     RM++AG                   L+ DQ             
Sbjct: 848  EAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCS 907

Query: 409  FTYK---------------------------ALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
            F Y+                           AL+     A     A ELL  M+  G  P
Sbjct: 908  FGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCP 967

Query: 442  SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
               +Y+ L+       N +  + +     ++G  V ++ Y+ LI   C+  +   A+  F
Sbjct: 968  DQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITF 1027

Query: 502  NLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAK 560
              M       D V+   L     R G    C + L  M  RR M +  IY   +   +K
Sbjct: 1028 ENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILAREASK 1086



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 103/430 (23%), Positives = 167/430 (38%), Gaps = 65/430 (15%)

Query: 127  DGNSHVLSW----LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTD 182
            DG      W    L+  +  +   +    +F++M    L P+    T L++   KD   D
Sbjct: 658  DGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLD 717

Query: 183  MVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLI 242
                + + M + G   N+  YNVLIH   K ++    E+L   M  + +  ++ TY  +I
Sbjct: 718  TATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMI 777

Query: 243  ALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK----- 297
               CK G    AL + ++M  +G  P+++TY+SLI    +EG++ EA  LF +++     
Sbjct: 778  DGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLI 837

Query: 298  --------------------------------GATPNHVTYTTLIDG----YCRANDLEE 321
                                            G  P   TY  LI G    Y  A+    
Sbjct: 838  PDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLA 897

Query: 322  ALR----------------LREVMAAK--GVYPG--VVTYNSILRKLCKEGRIRDANRLL 361
            AL                    VM+AK   + PG  V   N+++  L   GR  +AN LL
Sbjct: 898  ALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELL 957

Query: 362  NEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKA 421
              M  + + PD    N+L+ +  ++ +   AM V   M   G  +    YK LI   C+ 
Sbjct: 958  GSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQL 1017

Query: 422  KEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVY 481
                 A+     ML   ++P     + L+DG      ++  ++ L    +R       +Y
Sbjct: 1018 HRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIY 1077

Query: 482  RALIRRFCKK 491
              L R   KK
Sbjct: 1078 TILAREASKK 1087


>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Vitis vinifera]
          Length = 728

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 122/389 (31%), Positives = 200/389 (51%), Gaps = 4/389 (1%)

Query: 144 KMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLY 203
           K  ++ + +  +M      P+   CT L++ L KD   D   ++ + M + G  A++ LY
Sbjct: 193 KKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLY 252

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER 263
             LI   C + ++D+ ++L  EM  K + A++ TY+ L+   C+ G   EA  V + M  
Sbjct: 253 GTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAE 312

Query: 264 EGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEE 321
            GI PD+VTY  LI G C++GR   A  L   +  KG  P++VTY  L+ G C+   + +
Sbjct: 313 HGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVID 372

Query: 322 ALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM--NEKKIAPDNVTCNTL 379
           A ++  +M  KG    VVTYN++++ LC +G++ +A +L N M  NE  + P+  T N L
Sbjct: 373 AFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNML 432

Query: 380 INAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGF 439
           I   CK G    A+K+  +M++ G   +  TY  L+ G  KA ++  A EL   +LD GF
Sbjct: 433 IGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGF 492

Query: 440 SPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQR 499
            P+  +YS L+DG+C          L  E  + GL   +  Y  L+   CK+  ++ A+ 
Sbjct: 493 VPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKS 552

Query: 500 LFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
           LF  M       D + + ++     +AG+
Sbjct: 553 LFQEMGNANCEPDIISFNTMIDGTLKAGD 581



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 126/437 (28%), Positives = 208/437 (47%), Gaps = 6/437 (1%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           + + +F      NL+P    C  L+++LA+ R   + + VY++M  + V+ +    + LI
Sbjct: 57  EAVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGSLSALI 116

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
                +        ++  +  +    ++F  N ++   C+ G  +EA+ +   M R+ +S
Sbjct: 117 ECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVS 176

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRL 325
           PDIV+YN+LI+G C+  +++EA  L  +++  G  PN VT TTL+DG C+   ++EA+ L
Sbjct: 177 PDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMEL 236

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
            E M  KG    VV Y +++   C  G +     L +EM  K I+ + VT + L++  C+
Sbjct: 237 LEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCR 296

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
           +G    A  V N M E G+  D  TY  LI G CK      A +LL  M++ G  PS  +
Sbjct: 297 LGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVT 356

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+ L+ G C +       K+L   + +G   DV  Y  L++  C K KVD A +LFN M 
Sbjct: 357 YNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMF 416

Query: 506 GNGILGDSVIYT--SLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNE 563
            N    +  ++T   L     + G       I   M ++     L  Y        K  +
Sbjct: 417 DNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGK 476

Query: 564 ILDL--FWSHVVDRGLM 578
           I +    W  V+D G +
Sbjct: 477 IKEAMELWKQVLDLGFV 493



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 126/436 (28%), Positives = 204/436 (46%), Gaps = 4/436 (0%)

Query: 133 LSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMV 192
           LS L+  +A+ +  Q G  V   +       ++    ++L  L ++        + ++M 
Sbjct: 112 LSALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMG 171

Query: 193 QLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHY 252
           +  V  +I  YN LI+  CK+  + +   LL EME      +  T  TL+   CK G   
Sbjct: 172 RKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMD 231

Query: 253 EALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLI 310
           EA+ + + M+++G   D+V Y +LI GFC  G +   + LF ++  KG + N VTY+ L+
Sbjct: 232 EAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLV 291

Query: 311 DGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIA 370
            G CR    +EA  +   MA  G++P VVTY  ++  LCK+GR   A  LLN M EK   
Sbjct: 292 HGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEE 351

Query: 371 PDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL 430
           P NVT N L++  CK G    A K+   M+E G   D  TY  L+ G C   ++D A +L
Sbjct: 352 PSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKL 411

Query: 431 LFGMLDAG--FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRF 488
              M D      P+  +++ L+ G C +      +K+  + V +G C ++  Y  L+   
Sbjct: 412 FNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGC 471

Query: 489 CKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITL 548
            K  K+  A  L+  +   G + +S  Y+ L   + +         +  +M    L   L
Sbjct: 472 LKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPAL 531

Query: 549 KIYRSFSASYAKDNEI 564
             Y +  AS  K+  +
Sbjct: 532 FDYNTLMASLCKEGSL 547



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 123/406 (30%), Positives = 203/406 (50%), Gaps = 23/406 (5%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANL--KMTQDGLQVFDQMRVHNLM------PHL 165
           +VLNA+ +    PD         V+ Y  L   + +DG +    M + NLM      P  
Sbjct: 305 TVLNAMAEHGIHPD---------VVTYTGLIDGLCKDG-RATHAMDLLNLMVEKGEEPSN 354

Query: 166 HACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCE 225
               VLL+ L K+ L    +K+ + M++ G  A++  YN L+   C    VD+  KL   
Sbjct: 355 VTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNS 414

Query: 226 MEFKD--VRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCRE 283
           M   +  +  ++FT+N LI   CK+G   +A+ +  +M ++G   ++VTYN L+ G  + 
Sbjct: 415 MFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKA 474

Query: 284 GRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTY 341
           G+++EA  L++ +   G  PN  TY+ LIDG+C+   L  A  L   M   G+ P +  Y
Sbjct: 475 GKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDY 534

Query: 342 NSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLE 401
           N+++  LCKEG +  A  L  EM      PD ++ NT+I+   K GD     +++ +M+E
Sbjct: 535 NTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVE 594

Query: 402 AGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEA 461
            GL  D  T+  LI+   K  E+D AK  L  M+ +GF+P    Y  L+ G  +K +   
Sbjct: 595 MGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTE 654

Query: 462 LLKLLDEFVSRGLCVDVSVYRALIRRFCKK-EKVDYAQRLFNLMQG 506
           ++ LL +  ++G  +D  +   ++   C   ++VD  + L    QG
Sbjct: 655 IINLLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDVMELLPTFFQG 700



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 123/479 (25%), Positives = 210/479 (43%), Gaps = 29/479 (6%)

Query: 83  TMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYAN 142
           T++  L K+     A  +LE +  + F                 D +  +   L+  + N
Sbjct: 219 TLMDGLCKDGRMDEAMELLEAMKKKGF-----------------DADVVLYGTLISGFCN 261

Query: 143 LKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWK----VYKKMVQLGVVA 198
                 G ++FD+M    +  ++   + L++ L   RL    WK    V   M + G+  
Sbjct: 262 NGNLDRGKELFDEMLGKGISANVVTYSCLVHGLC--RLGQ--WKEANTVLNAMAEHGIHP 317

Query: 199 NIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQ 258
           ++  Y  LI   CK         LL  M  K       TYN L++  CK+G+  +A  + 
Sbjct: 318 DVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKIL 377

Query: 259 DRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI----KGATPNHVTYTTLIDGYC 314
             M  +G   D+VTYN+L+ G C +G++ EA +LF  +        PN  T+  LI G C
Sbjct: 378 RMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLC 437

Query: 315 RANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNV 374
           +   L +A+++   M  KG    +VTYN +L    K G+I++A  L  ++ +    P++ 
Sbjct: 438 KEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSF 497

Query: 375 TCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGM 434
           T + LI+ +CK+     A  +   M   GL    F Y  L+   CK   ++ AK L   M
Sbjct: 498 TYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEM 557

Query: 435 LDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKV 494
            +A   P   S++ ++DG     + + + +L  + V  GL  D   +  LI R  K  ++
Sbjct: 558 GNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGEL 617

Query: 495 DYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRS 553
           D A+     M  +G   D+++Y SL       G+     ++L  M  +  ++  KI  +
Sbjct: 618 DEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVST 676



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 56/236 (23%), Positives = 113/236 (47%), Gaps = 2/236 (0%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           ++ ++++ Q+     +P+    ++L++   K R+ ++   ++ +M   G+   +  YN L
Sbjct: 478 KEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTL 537

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           + + CK   +++ + L  EM   +   D+ ++NT+I    K G       +Q +M   G+
Sbjct: 538 MASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGL 597

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
            PD +T+++LI+   + G + EA+     +   G TP+ + Y +L+ G     D  E + 
Sbjct: 598 RPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIIN 657

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLI 380
           L   MAAKG        ++IL  LC   +  D   LL    +      +++CN L+
Sbjct: 658 LLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDVMELLPTFFQGTSEGASISCNELL 713


>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Brachypodium distachyon]
          Length = 692

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 133/481 (27%), Positives = 230/481 (47%), Gaps = 35/481 (7%)

Query: 132 VLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYK-- 189
           V+  L+   A+  +  D +    ++R   + P+   C  +L  LA++R +++ W++++  
Sbjct: 130 VVDTLLSLLADRGLLDDAVLALARVRELRVPPNTRTCNHILLCLARERSSELAWRLFEQL 189

Query: 190 -----------------------------KMVQLGVVANIHLYNVLIHACCKSSDVDKVE 220
                                        +M  +G   ++  YN LI    K  ++++VE
Sbjct: 190 PAPNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVE 249

Query: 221 KLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGF 280
           KL+ EM     R D+ TYN L+  +CK G    A +    M+REG+  ++VT+++ +  F
Sbjct: 250 KLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAF 309

Query: 281 CREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGV 338
           C+ G +REA +LF  +  KG  PN VTYT L+DG C+A  L++AL L   M  +GV   V
Sbjct: 310 CKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNV 369

Query: 339 VTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNR 398
           VTY  ++  LCKEG++ +A  +   M    I  + +   TLI+ +    ++  A+ + + 
Sbjct: 370 VTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSE 429

Query: 399 MLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNN 458
           M + G+ LD   Y ALI G C  +++D AK LL  M + G  P+   Y+ ++D       
Sbjct: 430 MKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARK 489

Query: 459 EEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTS 518
           E   + LL + +  G   ++  Y AL+   CK   +D A   FN M   G+  +   YT+
Sbjct: 490 ESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTA 549

Query: 519 LAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFW--SHVVDRG 576
           L     + G       +LD+M  + + +   +  S    + K   + D F   + +++ G
Sbjct: 550 LVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSG 609

Query: 577 L 577
           L
Sbjct: 610 L 610



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 113/403 (28%), Positives = 201/403 (49%), Gaps = 2/403 (0%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           ++  +MR     P +     L+N   K    +  +  + +M + GV+AN+  ++  + A 
Sbjct: 250 KLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAF 309

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           CK+  V +  KL  +M  K ++ +  TY  L+   CK G   +AL + + M ++G+  ++
Sbjct: 310 CKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNV 369

Query: 271 VTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREV 328
           VTY  L+ G C+EG++ EA  +FR ++  G   N + YTTLI G+    + E AL L   
Sbjct: 370 VTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSE 429

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M  KG+   V  Y +++  LC   ++ +A  LLN+M+E  + P+NV    +++A  K   
Sbjct: 430 MKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARK 489

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
            + A+ +  +M+++G   +  TY AL+ G CKA  +D A      M+D G  P+  +Y+ 
Sbjct: 490 ESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTA 549

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG 508
           LVDG C     +  + LLDE + +G+ +D  V  +L+    K+  +  A  L   M  +G
Sbjct: 550 LVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSG 609

Query: 509 ILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIY 551
           +  D   YT   + +      +   ++L +M    +     +Y
Sbjct: 610 LQLDLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVVY 652



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 108/373 (28%), Positives = 173/373 (46%), Gaps = 40/373 (10%)

Query: 128 GNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKV 187
            N    S  V  +    M ++ +++F QMR+  + P+    T L++   K    D    +
Sbjct: 297 ANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVL 356

Query: 188 YKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCK 247
             +MVQ GV  N+  Y VL+   CK   V + E +   ME   +RA+   Y TLI  +  
Sbjct: 357 TNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFV 416

Query: 248 KGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI----------- 296
                 AL++   M+ +G+  D+  Y +LI G C   ++ EA+ L   +           
Sbjct: 417 YKNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVI 476

Query: 297 --------------------------KGATPNHVTYTTLIDGYCRANDLEEALRLREVMA 330
                                      G  PN VTY  L+DG C+A  ++EA+     M 
Sbjct: 477 YTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMV 536

Query: 331 AKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTA 390
             G+ P V  Y +++  LCK GR+  A  LL+EM +K ++ DNV C +L++ + K G+  
Sbjct: 537 DLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQ 596

Query: 391 SAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLV 450
            A  +K +M+ +GL LD + Y   + GFC    +  A+E+L  M++ G +P    Y+ L+
Sbjct: 597 DAFALKAKMINSGLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLI 656

Query: 451 DGYCNK--NNEEA 461
           +  C K  N EEA
Sbjct: 657 N-KCQKLGNMEEA 668


>gi|414875530|tpg|DAA52661.1| TPA: hypothetical protein ZEAMMB73_467633 [Zea mays]
          Length = 987

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 117/373 (31%), Positives = 194/373 (52%), Gaps = 6/373 (1%)

Query: 169 TVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEF 228
           T+L+  L + R       +   MVQ G   N+H+Y +LI   CK   +     LL EM  
Sbjct: 253 TILIQGLYEARCVREALVLVFMMVQDGCSLNLHMYTLLIKGLCKEGRIHDARGLLDEMPL 312

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
           + V   ++TYN +I  YCK G   +AL ++  ME+ G +PD  TYNSLI+G C  G++ E
Sbjct: 313 RGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLC-GGKLDE 371

Query: 289 ARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILR 346
           A  L      +G TP  +T+T LI+GYC+A  +++ALR++  M +      +  Y  ++ 
Sbjct: 372 AEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLIN 431

Query: 347 KLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLML 406
            L K+ R+++A   LNEM    +AP+ V   ++I+ YCK+G   +A++V   M   G   
Sbjct: 432 VLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEHEGCHP 491

Query: 407 DQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLL 466
           + +TY +LI+G  + K++  A  L+  M + G +P   +Y+ L+ G C K+  +   +L 
Sbjct: 492 NAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRLF 551

Query: 467 DEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRA 526
           +     GL  D   Y  L    CK  +   A+  ++ +   G++   V YTSL   + +A
Sbjct: 552 EMMEKNGLTPDEQAYNVLTDALCKSGR---AEEAYSFLVRKGVVLTKVTYTSLVDGFSKA 608

Query: 527 GEPKACSDILDDM 539
           G     + +++ M
Sbjct: 609 GNTDFAAVLIEKM 621



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 148/610 (24%), Positives = 257/610 (42%), Gaps = 111/610 (18%)

Query: 23  KGHWAKLLNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHW 82
           KG   K L+P++ ++  +      +  L      P+ + AFF+W  +  P ++H+  SH 
Sbjct: 37  KGSAYKRLSPSVTAAHVADLFRAPVSPL-----DPATALAFFEWV-ARRPGFRHTAASHA 90

Query: 83  TMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYAN 142
            ++ +L + +                    P+  + LV       G +           +
Sbjct: 91  ALLQLLARRR-------------------APANYDKLVLSMISCSGTAE----------D 121

Query: 143 LKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHL 202
           ++   D +Q   ++    L+       + L SL +  +T+ + K+Y  +VQ G++ +   
Sbjct: 122 VREAVDAIQAIRRVGGKRLVLSPKCYNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVT 181

Query: 203 YNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCK--------------- 247
           YN +I A CK   +    +  C +    ++ D +T N L+  YC+               
Sbjct: 182 YNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMP 241

Query: 248 ---------------KGMH-----YEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMR 287
                          +G++      EAL +   M ++G S ++  Y  LI G C+EGR+ 
Sbjct: 242 LMGCRRNEYSYTILIQGLYEARCVREALVLVFMMVQDGCSLNLHMYTLLIKGLCKEGRIH 301

Query: 288 EARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSIL 345
           +AR L  +  ++G  P+  TY  +IDGYC++  +++AL ++ +M   G  P   TYNS++
Sbjct: 302 DARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLI 361

Query: 346 RKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLM 405
             LC  G++ +A  LLN    +   P  +T   LIN YCK      A++VK+ M+ +   
Sbjct: 362 YGLCG-GKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCK 420

Query: 406 LDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLK- 464
           LD   Y  LI+   K   +  AKE L  M   G +P+   Y+ ++DGYC      A L+ 
Sbjct: 421 LDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEV 480

Query: 465 ----------------------------------LLDEFVSRGLCVDVSVYRALIRRFCK 490
                                             L+ +    G+   V  Y  LI+  CK
Sbjct: 481 FKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCK 540

Query: 491 KEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKI 550
           K + D A RLF +M+ NG+  D   Y  L  A  ++G  +     L    R+ +++T   
Sbjct: 541 KHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEAYSFL---VRKGVVLTKVT 597

Query: 551 YRSFSASYAK 560
           Y S    ++K
Sbjct: 598 YTSLVDGFSK 607



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 122/480 (25%), Positives = 213/480 (44%), Gaps = 23/480 (4%)

Query: 77  SLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWL 136
           +L  +  +I  L K      A+ +L+++ LR  + +    NA++      DG        
Sbjct: 283 NLHMYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMI------DG-------- 328

Query: 137 VIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGV 196
              Y      +D L +   M  +   P       L+  L   +L D   ++    +  G 
Sbjct: 329 ---YCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCGGKL-DEAEELLNGAIARGF 384

Query: 197 VANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALA 256
              +  +  LI+  CK+  +D   ++   M   + + DL  Y  LI +  KK    EA  
Sbjct: 385 TPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKE 444

Query: 257 VQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR--DIKGATPNHVTYTTLIDGYC 314
             + M   G++P++V Y S+I G+C+ G +  A  +F+  + +G  PN  TY +LI G  
Sbjct: 445 TLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLI 504

Query: 315 RANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNV 374
           +   L +A+ L   M   G+ PGV+ Y ++++  CK+    +A RL   M +  + PD  
Sbjct: 505 QDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQ 564

Query: 375 TCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGM 434
             N L +A CK G    A      ++  G++L + TY +L+ GF KA   D A  L+  M
Sbjct: 565 AYNVLTDALCKSGRAEEAYSF---LVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKM 621

Query: 435 LDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKV 494
           ++ G      +YS L+   C +      L +LD+    G+  ++  Y  +I    K+ K 
Sbjct: 622 VNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKH 681

Query: 495 DYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSF 554
           D+A+ LFN M  +G    +  YT    +Y + G+ +    ++ +M R  +   +  Y  F
Sbjct: 682 DHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVTPDVVTYHIF 741



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 149/599 (24%), Positives = 240/599 (40%), Gaps = 71/599 (11%)

Query: 28  KLLNPNIASSLTSTAIHKVLLNLYNC-CHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIH 86
           +LLN  IA   T T I     NL N  C    +  A    +     N K  LQ++  +I+
Sbjct: 374 ELLNGAIARGFTPTVI--TFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLIN 431

Query: 87  ILTKNKHFKSAQNMLEKIALRDFLST----PSVLNALVKI--------------HDDPDG 128
           +L K    K A+  L ++             S+++   K+              H+    
Sbjct: 432 VLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEHEGCHP 491

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N+     L+      K     + +  +M+   + P + A T L+    K    D  ++++
Sbjct: 492 NAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRLF 551

Query: 189 KKMVQLGVVANIHLYNVLIHACCKS-----------------------SDVDKVEK---- 221
           + M + G+  +   YNVL  A CKS                       S VD   K    
Sbjct: 552 EMMEKNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNT 611

Query: 222 -----LLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSL 276
                L+ +M  +  +ADL+TY+ L+   CK+    EAL++ D+M   G+  +IV Y  +
Sbjct: 612 DFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTII 671

Query: 277 IHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGV 334
           I    +EG+   A+ LF ++   G  P+  TYT  I  YC+   +EEA  L   M   GV
Sbjct: 672 ISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGV 731

Query: 335 YPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG------- 387
            P VVTY+  +      G +  A   L  M +    P+  T   L+  + K+        
Sbjct: 732 TPDVVTYHIFINGCGHMGYMDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYI 791

Query: 388 DTA---------SAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAG 438
           DT+         +  ++  RM++ GL     TY ++I GFCKA  ++ A  LL  ML   
Sbjct: 792 DTSGMWNWIELNTVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKA 851

Query: 439 FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQ 498
            SP+   Y+ L+   C+       +  + + +  G    +  Y  LI   C +   D A+
Sbjct: 852 ISPNEEIYTMLIKCCCDIKLFGKDVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAK 911

Query: 499 RLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSAS 557
            LF  + G     + V +  L     +AG    CS +L  M  R   I  + Y   + S
Sbjct: 912 SLFCDLLGMDYNHNEVAWKILNDGLLKAGHVDFCSQLLAAMDNRHCRIDSESYSMLTDS 970



 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 71/250 (28%), Positives = 115/250 (46%), Gaps = 2/250 (0%)

Query: 318 DLEEAL-RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTC 376
           D+ E + +L   +  +G+ P  VTYN+++   CK+G +  A+R    + E  +  D  TC
Sbjct: 158 DMTEYMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTC 217

Query: 377 NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD 436
           N L+  YC+  D   A  +   M   G   ++++Y  LI G  +A+ +  A  L+F M+ 
Sbjct: 218 NALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLYEARCVREALVLVFMMVQ 277

Query: 437 AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDY 496
            G S +   Y+ L+ G C +        LLDE   RG+   V  Y A+I  +CK  ++  
Sbjct: 278 DGCSLNLHMYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKD 337

Query: 497 AQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSA 556
           A  +  LM+ NG   D   Y SL Y     G+     ++L+    R    T+  + +   
Sbjct: 338 ALGIKALMEQNGCNPDDWTYNSLIYGLC-GGKLDEAEELLNGAIARGFTPTVITFTNLIN 396

Query: 557 SYAKDNEILD 566
            Y K   I D
Sbjct: 397 GYCKAERIDD 406


>gi|414586855|tpg|DAA37426.1| TPA: hypothetical protein ZEAMMB73_447866 [Zea mays]
          Length = 484

 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 123/422 (29%), Positives = 210/422 (49%), Gaps = 10/422 (2%)

Query: 111 STPSVLNALVKIH--DDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHAC 168
           S P +L  LV     DDP   + ++S +   YA+  +  DG  +        +   + A 
Sbjct: 29  SPPRLLPLLVSAASTDDP---APLVSAVAKVYADEGLLPDGCSLLLLALRRGIRVPMPAW 85

Query: 169 TVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEF 228
           + L+N L         +  Y  ++  GV      +N+L+    +S  +     +  EM  
Sbjct: 86  SDLMNRLPS---VPEAYAFYLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLR 142

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
           + V+  + T+NTL++  CK      A A++  M + GI+PD+ TY + I G C+ GR+++
Sbjct: 143 RGVQPTVVTFNTLMSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQD 202

Query: 289 ARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILR 346
           A  +F ++  +G  PN V  TTLID +C+  D+   L LR  MA +GV   +V YN+++ 
Sbjct: 203 AMEMFEEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVN 262

Query: 347 KLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLML 406
             C+   ++ AN ++ EM +  + PD VT  TLI+  CK G+  +AM++K  M + G+ L
Sbjct: 263 GFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVAL 322

Query: 407 DQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLL 466
           D  TY ALI G  KA     A+ +L  M++AG  P   +Y+ ++D +C   + +   K L
Sbjct: 323 DDVTYTALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHL 382

Query: 467 DEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRA 526
            E  ++G    +  Y  ++  FC   ++  A  L N M   G+  + + Y  L   + + 
Sbjct: 383 KEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLLNAMLNIGVCPNDITYNILLDGHCKH 442

Query: 527 GE 528
           G+
Sbjct: 443 GK 444



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 108/345 (31%), Positives = 179/345 (51%), Gaps = 7/345 (2%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
            VFD+M    + P +     L++ + K    +    +   M + G+  +++ Y   I   
Sbjct: 135 NVFDEMLRRGVQPTVVTFNTLMSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGL 194

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           CK+  +    ++  EM  + +  +     TLI  +CK+G     L ++  M   G+  D+
Sbjct: 195 CKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADL 254

Query: 271 VTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREV 328
           V YN+L++GFCR   M+ A  +  +++  G  P+ VTYTTLIDG C+  +L+ A+ +++ 
Sbjct: 255 VAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQE 314

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M+ +GV    VTY +++  L K GR  DA R+L EM E  + PDN T   +I+A+CK GD
Sbjct: 315 MSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGD 374

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
             +  K    M   G      TY  +++GFC   +M  A  LL  ML+ G  P+  +Y+ 
Sbjct: 375 VKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLLNAMLNIGVCPNDITYNI 434

Query: 449 LVDGYCNKNNEEALLKLLDEFVS-RGLCVDVSVYRALIRRFCKKE 492
           L+DG+C    +   ++  +E  S +G+  D  VY +LI  F KK+
Sbjct: 435 LLDGHC----KHGKVRDTEELKSAKGMVSDFGVYTSLINEFVKKK 475



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 88/268 (32%), Positives = 147/268 (54%), Gaps = 2/268 (0%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEA 322
           G+ P+   +N L+    R G++  AR +F ++  +G  P  VT+ TL+ G C+A+DL  A
Sbjct: 109 GVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLNNA 168

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
             LR +MA  G+ P V TY + ++ LCK GRI+DA  +  EM E+ + P+ V   TLI+A
Sbjct: 169 NALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDA 228

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +CK GD  + ++++  M   G+  D   Y AL++GFC+ ++M  A +++  M   G  P 
Sbjct: 229 HCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPD 288

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ L+DG C +   +  +++  E    G+ +D   Y ALI    K  +   A+R+  
Sbjct: 289 KVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILC 348

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPK 530
            M   G+  D+  YT +  A+ + G+ K
Sbjct: 349 EMMEAGLQPDNTTYTMVIDAFCKNGDVK 376



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 85/278 (30%), Positives = 151/278 (54%), Gaps = 5/278 (1%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           QD +++F++M    L P+    T L+++  K+       ++  +M   GV A++  YN L
Sbjct: 201 QDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNAL 260

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           ++  C+  D+     ++ EM    ++ D  TY TLI   CK+G    A+ ++  M  EG+
Sbjct: 261 VNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGV 320

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
           + D VTY +LI G  + GR  +A R+  ++   G  P++ TYT +ID +C+  D++   +
Sbjct: 321 ALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFK 380

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
             + M  KG  PG+VTYN ++   C  G++++A+ LLN M    + P+++T N L++ +C
Sbjct: 381 HLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLLNAMLNIGVCPNDITYNILLDGHC 440

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAK 422
           K G      ++K+     G++ D   Y +LI+ F K K
Sbjct: 441 KHGKVRDTEELKS---AKGMVSDFGVYTSLINEFVKKK 475



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 115/234 (49%)

Query: 333 GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
           GV P    +N ++R + + G++  A  + +EM  + + P  VT NTL++  CK  D  +A
Sbjct: 109 GVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLNNA 168

Query: 393 MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
             ++  M +AG+  D +TY A I G CK   +  A E+   M + G +P+    + L+D 
Sbjct: 169 NALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDA 228

Query: 453 YCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGD 512
           +C + +  A L+L  E  +RG+  D+  Y AL+  FC+   +  A  +   M+ +G+  D
Sbjct: 229 HCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPD 288

Query: 513 SVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
            V YT+L     + GE     ++  +M    + +    Y +  +  +K    +D
Sbjct: 289 KVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVD 342



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/165 (23%), Positives = 77/165 (46%), Gaps = 6/165 (3%)

Query: 399 MLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNK-- 456
           +L+AG+  +   +  L+    ++ ++  A+ +   ML  G  P+  +++ L+ G C    
Sbjct: 105 LLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASD 164

Query: 457 -NNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVI 515
            NN  AL  L+      G+  DV  Y A I+  CK  ++  A  +F  M   G+  ++V+
Sbjct: 165 LNNANALRGLM---AKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVV 221

Query: 516 YTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAK 560
            T+L  A+ + G+  A  ++  +M  R +   L  Y +    + +
Sbjct: 222 LTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCR 266



 Score = 45.8 bits (107), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 32/147 (21%), Positives = 61/147 (41%), Gaps = 4/147 (2%)

Query: 434 MLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEK 493
           +LDAG  P    ++ L+          +   + DE + RG+   V  +  L+   CK   
Sbjct: 105 LLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASD 164

Query: 494 VDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRS 553
           ++ A  L  LM   GI  D   Y +      + G  +   ++ ++M  R L     +  +
Sbjct: 165 LNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTT 224

Query: 554 FSASYAKDNEI---LDLFWSHVVDRGL 577
              ++ K+ ++   L+L W  +  RG+
Sbjct: 225 LIDAHCKEGDVTAGLELRW-EMATRGV 250


>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Cucumis sativus]
          Length = 645

 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 146/572 (25%), Positives = 259/572 (45%), Gaps = 70/572 (12%)

Query: 36  SSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFK 95
           SSLT  ++   +LN    C  P  +  FF  A       + ++Q +  +IH+L  +K   
Sbjct: 26  SSLTPDSLITTVLN----CRSPWKALEFFNAAP------EKNIQLYSAIIHVLVGSKLLS 75

Query: 96  SAQNMLEKIAL------RDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDG 149
            A+ +L  +        + + +     + L ++        +V   L+I    +++ ++ 
Sbjct: 76  HARYLLNDLVQNLVKSHKPYHACQLAFSELSRLKSS-KFTPNVYGELIIVLCKMELVEEA 134

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           L ++ ++        + AC VLL  L K    +++W++Y++M+  G+  ++  +  LI  
Sbjct: 135 LSMYHKV---GAALTIQACNVLLYVLVKTGRFELLWRIYEEMISNGLSPSVITFGTLIDG 191

Query: 210 CCKSSDVDKVEKLLCEMEFKD-----------------------------------VRAD 234
           CC+  D+ + +++  EM  K                                    V  +
Sbjct: 192 CCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPN 251

Query: 235 LFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR 294
           ++TYNTL+  YCK     +AL +   M  EG+ PD+VT+  LI G C+ G M+ AR LF 
Sbjct: 252 VYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFV 311

Query: 295 DIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEG 352
           ++     TPN   Y +LID YC+  D+ EA+ L   +    V P V TY+ ++R LC   
Sbjct: 312 NMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVS 371

Query: 353 RIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYK 412
           R  +A  +  +M ++ I  ++VT N+LI+  CK G    A+++ ++M E G+  +  T+ 
Sbjct: 372 RTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFS 431

Query: 413 ALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSR 472
            LI G+CK + +  A  +   M+    SP   +Y+ ++DG+C   + +  LKL  + +  
Sbjct: 432 TLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDN 491

Query: 473 GLCVDVSVYRALIRRFCKKEKVDYAQRLF-----------NLMQGNG--ILGDSVIYTSL 519
           G+  +      L+   CK  K+  A  LF           N+  G     L + V YT+L
Sbjct: 492 GITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQTPRCNVDAGGSKPSLTNHVAYTAL 551

Query: 520 AYAYWRAGEPKACSDILDDMYRRRLMITLKIY 551
            +   + G+      +  DM R  L     IY
Sbjct: 552 IHGLCQDGQFSKAVKLFSDMRRYGLQPDEVIY 583



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 105/339 (30%), Positives = 172/339 (50%), Gaps = 15/339 (4%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N +  + L+  Y  L   +  L+++  M    L+P +    +L++ L K         ++
Sbjct: 251 NVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLF 310

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
             M++  V  NI +YN LI A CK  DV +   L  E+E  +V  D+FTY+ LI   C  
Sbjct: 311 VNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSV 370

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTY 306
               EA  + ++M +EGI  + VTYNSLI G C+EG+M +A  +   +   G  PN +T+
Sbjct: 371 SRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITF 430

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
           +TLIDGYC+  +L+ A+ +   M  K + P VVTY +++   CK G +++A +L ++M +
Sbjct: 431 STLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLD 490

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLE---------AG----LMLDQFTYKA 413
             I P+  T + L++  CK G  + A+++    +E         AG     + +   Y A
Sbjct: 491 NGITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQTPRCNVDAGGSKPSLTNHVAYTA 550

Query: 414 LIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
           LIHG C+  +   A +L   M   G  P    Y  ++ G
Sbjct: 551 LIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVIYVVMLRG 589



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 119/422 (28%), Positives = 189/422 (44%), Gaps = 34/422 (8%)

Query: 169 TVLLNSLAKDRLTDMV------WKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
            V L+SL  D L   V      WK  +         NI LY+ +IH    S  +     L
Sbjct: 22  VVSLSSLTPDSLITTVLNCRSPWKALE-FFNAAPEKNIQLYSAIIHVLVGSKLLSHARYL 80

Query: 223 L----------------CEMEFKDV---RADLFT---YNTLIALYCKKGMHYEALAVQDR 260
           L                C++ F ++   ++  FT   Y  LI + CK  +  EAL++  +
Sbjct: 81  LNDLVQNLVKSHKPYHACQLAFSELSRLKSSKFTPNVYGELIIVLCKMELVEEALSMYHK 140

Query: 261 MEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRAND 318
           +   G +  I   N L++   + GR     R++ ++   G +P+ +T+ TLIDG CR  D
Sbjct: 141 V---GAALTIQACNVLLYVLVKTGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGD 197

Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT 378
           L  A  + + M  KG+ P V+ Y  ++R LC + +I +A  +   M E  + P+  T NT
Sbjct: 198 LLRAQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNT 257

Query: 379 LINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAG 438
           L++ YCK+ +   A+++   ML  GL+ D  T+  LI G CK  EM  A+ L   M+   
Sbjct: 258 LMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFS 317

Query: 439 FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQ 498
            +P+   Y+ L+D YC   +    + L  E     +  DV  Y  LIR  C   + + A 
Sbjct: 318 VTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAG 377

Query: 499 RLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASY 558
            +F  M   GIL +SV Y SL     + G+     +I   M    +   +  + +    Y
Sbjct: 378 NIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGY 437

Query: 559 AK 560
            K
Sbjct: 438 CK 439



 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 81/332 (24%), Positives = 137/332 (41%), Gaps = 71/332 (21%)

Query: 67  AESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDP 126
            E  VP+    + +   +I  L K    K+A+N+   + +  F  TP             
Sbjct: 280 GEGLVPD----VVTFGILIDGLCKFGEMKAARNLF--VNMIKFSVTP------------- 320

Query: 127 DGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWK 186
             N  V + L+  Y  +    + + +F ++    + P +   ++L+  L     T+    
Sbjct: 321 --NIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGN 378

Query: 187 VYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYC 246
           +++KM + G++AN   YN LI  CCK   +DK  ++  +M    V  ++ T++TLI  YC
Sbjct: 379 IFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYC 438

Query: 247 KKGMHYEALAVQDRMEREGISPDIVTYNSLIHG--------------------------- 279
           K      A+ +   M  + +SPD+VTY ++I G                           
Sbjct: 439 KIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCY 498

Query: 280 --------FCREGRMREARRLFR------------DIKGATP---NHVTYTTLIDGYCRA 316
                    C++G++ +A  LF             D  G+ P   NHV YT LI G C+ 
Sbjct: 499 TISCLLDGLCKDGKISDALELFTEKIEFQTPRCNVDAGGSKPSLTNHVAYTALIHGLCQD 558

Query: 317 NDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
               +A++L   M   G+ P  V Y  +LR L
Sbjct: 559 GQFSKAVKLFSDMRRYGLQPDEVIYVVMLRGL 590



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 65/326 (19%), Positives = 124/326 (38%), Gaps = 44/326 (13%)

Query: 30  LNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILT 89
           + PNIA       ++  L++ Y  C +  +S A   + E         + ++  +I  L 
Sbjct: 318 VTPNIA-------VYNSLIDAY--CKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLC 368

Query: 90  KNKHFKSAQNMLEKIALRDFLSTPSVLNALVK------------------IHDDPDGNSH 131
                + A N+ EK+     L+     N+L+                     +  + N  
Sbjct: 369 SVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVI 428

Query: 132 VLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKM 191
             S L+  Y  ++  Q  + ++ +M + +L P +   T +++   K        K+Y  M
Sbjct: 429 TFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDM 488

Query: 192 VQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCE-MEFKDVRADL------------FTY 238
           +  G+  N +  + L+   CK   +    +L  E +EF+  R ++              Y
Sbjct: 489 LDNGITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQTPRCNVDAGGSKPSLTNHVAY 548

Query: 239 NTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK- 297
             LI   C+ G   +A+ +   M R G+ PD V Y  ++ G  +   +     L  D+  
Sbjct: 549 TALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVIYVVMLRGLFQVKYI--LMMLHADMLK 606

Query: 298 -GATPNHVTYTTLIDGYCRANDLEEA 322
            G  PN   +  L + Y  +  L+ A
Sbjct: 607 FGVIPNSAVHVILCECYQESGFLKSA 632


>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
          Length = 514

 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 129/468 (27%), Positives = 224/468 (47%), Gaps = 15/468 (3%)

Query: 110 LSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACT 169
           L   ++++ +V+    PD  ++    +V     L  T   L +  +M    +  ++   +
Sbjct: 27  LQALALVDRMVEEGHQPDAVTY--GTIVNGMCKLGDTVSALNMLRKMDESQIKANVVIYS 84

Query: 170 VLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFK 229
            +++ L KD        ++ +M + G+  N+  YN +I   C        E+LL +M  +
Sbjct: 85  AIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGYCSYGKWSDAEQLLRDMIER 144

Query: 230 DVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA 289
           ++  D+ T++ LI  + K+G    A  +   M R  I P  +TY+S+I GFC+  R+ +A
Sbjct: 145 NIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTITYSSMIDGFCKHSRLEDA 204

Query: 290 RRLFRDI--KGATPNHVTYTTLIDGYCRA-----------NDLEEALRLREVMAAKGVYP 336
           + +F  +  KG +P+ +T  TLIDG CRA            ++  A  L + M + GV P
Sbjct: 205 KHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMISNGVSP 264

Query: 337 GVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVK 396
            +VT N++L  LC+ G++  A  +     + K+  D  TCN +IN  CK      A  + 
Sbjct: 265 DIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEAWDLF 324

Query: 397 NRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNK 456
           N +   G+  D  TY  LI  F K      A+++   ML  G  PS  +Y+ +VDG+C +
Sbjct: 325 NSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQ 384

Query: 457 NNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIY 516
           N  E   +++D  VS G   DV  +  LI+ +CK  +VD    LF+ M   G++ D++ Y
Sbjct: 385 NRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTITY 444

Query: 517 TSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
            +L + + + G+     DI ++M    +      +RS  A      E+
Sbjct: 445 NALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAGLCTKAEL 492



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 106/387 (27%), Positives = 184/387 (47%), Gaps = 13/387 (3%)

Query: 191 MVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGM 250
           MV+ G  AN+  +  L++  C+   V +   L+  M  +  + D  TY T++   CK G 
Sbjct: 1   MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60

Query: 251 HYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTT 308
              AL +  +M+   I  ++V Y++++   C++G   +A+ +F ++  KG  PN +TY  
Sbjct: 61  TVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNC 120

Query: 309 LIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKK 368
           +IDGYC      +A +L   M  + + P VVT+++++    KEG++  A  L  EM  + 
Sbjct: 121 MIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRN 180

Query: 369 IAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKA-----------LIHG 417
           I P  +T +++I+ +CK      A  + + M+  G   D  T              LIHG
Sbjct: 181 IFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHG 240

Query: 418 FCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVD 477
           FC+   +++A++L   M+  G SP   + + L+ G C     E  L++   F    + +D
Sbjct: 241 FCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLD 300

Query: 478 VSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILD 537
            +    +I   CK  KVD A  LFN +  NG+  D V Y  L   + + G      DI  
Sbjct: 301 TATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYL 360

Query: 538 DMYRRRLMITLKIYRSFSASYAKDNEI 564
           +M  + ++ +   Y S    + K N +
Sbjct: 361 EMLCKGIIPSTVTYNSMVDGFCKQNRL 387



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 90/203 (44%)

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
           M E     + VT  TL+N  C+ G    A+ + +RM+E G   D  TY  +++G CK  +
Sbjct: 1   MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60

Query: 424 MDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRA 483
              A  +L  M ++    +   YS +VD  C   N      +  E   +G+  +V  Y  
Sbjct: 61  TVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNC 120

Query: 484 LIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRR 543
           +I  +C   K   A++L   M    I  D V +++L  A+ + G+     ++  +M RR 
Sbjct: 121 MIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRN 180

Query: 544 LMITLKIYRSFSASYAKDNEILD 566
           +  T   Y S    + K + + D
Sbjct: 181 IFPTTITYSSMIDGFCKHSRLED 203


>gi|414882142|tpg|DAA59273.1| TPA: hypothetical protein ZEAMMB73_713491 [Zea mays]
          Length = 987

 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 117/373 (31%), Positives = 193/373 (51%), Gaps = 6/373 (1%)

Query: 169 TVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEF 228
           T+L+  L + R       +   MV  G   N+H Y +LI   CK   +     LL EM  
Sbjct: 253 TILIQGLCEARCVREALVLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIHDARGLLDEMPL 312

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
           + V   ++TYN +I  YCK G   +AL ++  ME+ G +PD  TYNSLI+G C  G++ E
Sbjct: 313 RGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLC-GGKLDE 371

Query: 289 ARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILR 346
           A  L      +G TP  +T+T LI+GYC+A  +++ALR++  M +      +  Y  ++ 
Sbjct: 372 AEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLIN 431

Query: 347 KLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLML 406
            L K+ R+++A   LNEM    +AP+ VT  ++I+ YCK+G   +A++V   M   G   
Sbjct: 432 VLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHP 491

Query: 407 DQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLL 466
           + +TY +LI+G  + K++  A  L+  M + G +P   +Y+ L+ G C K+  +   +L 
Sbjct: 492 NAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLF 551

Query: 467 DEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRA 526
           +     GL  D   Y  L    CK  +   A+  ++ +   G++   V YTSL   + +A
Sbjct: 552 EMMEQNGLTPDEQAYNVLTDALCKSGR---AEEAYSFLVRKGVVLTKVTYTSLVDGFSKA 608

Query: 527 GEPKACSDILDDM 539
           G     + +++ M
Sbjct: 609 GNTDFAAVLIEKM 621



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 140/523 (26%), Positives = 232/523 (44%), Gaps = 81/523 (15%)

Query: 23  KGHWAKLLNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHW 82
           KG   K L+P++ ++  +      +  L      P+ + AFF+   +  P ++H+  SH 
Sbjct: 37  KGSAYKRLSPSVTAAHVADLFRAPVSPL-----DPATALAFFECV-ARRPGFRHTAASHA 90

Query: 83  TMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYAN 142
            ++ +L + +                    P+  + LV       G +           +
Sbjct: 91  ALLQLLARRR-------------------APANYDKLVLSMISCSGTAE----------D 121

Query: 143 LKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHL 202
           ++   D +Q   ++    L+       + L SL +  +T+ + K+Y  +VQ G++     
Sbjct: 122 VREAVDAIQAIRRVGGKRLVLSPKCYNLALRSLLRFDMTEYMGKLYSHLVQEGLLP---- 177

Query: 203 YNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDR-- 260
                                          D  TYNT+I  YCKKG    +LA+  R  
Sbjct: 178 -------------------------------DTVTYNTMIMAYCKKG----SLAIAHRYF 202

Query: 261 --MEREGISPDIVTYNSLIHGFCREGRMREARRLFR--DIKGATPNHVTYTTLIDGYCRA 316
             +   G+  D  T N+L+ G+CR   +R+A  L     + G   N  +YT LI G C A
Sbjct: 203 CLLRESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCEA 262

Query: 317 NDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTC 376
             + EAL L  +M   G    + TY  +++ LCKEGRI DA  LL+EM  + + P   T 
Sbjct: 263 RCVREALVLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTY 322

Query: 377 NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD 436
           N +I+ YCK G    A+ +K  M + G   D +TY +LI+G C  K +D A+ELL G + 
Sbjct: 323 NAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCGGK-LDEAEELLNGAIA 381

Query: 437 AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDY 496
            GF+P+  +++ L++GYC     +  L++    +S    +D+  Y  LI    KK ++  
Sbjct: 382 RGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKE 441

Query: 497 AQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
           A+   N M  NG+  + V YTS+   Y + G   A  ++   M
Sbjct: 442 AKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLM 484



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 124/480 (25%), Positives = 215/480 (44%), Gaps = 23/480 (4%)

Query: 77  SLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWL 136
           +L ++  +I  L K      A+ +L+++ LR  + +    NA++      DG        
Sbjct: 283 NLHTYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMI------DG-------- 328

Query: 137 VIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGV 196
              Y      +D L +   M  +   P       L+  L   +L D   ++    +  G 
Sbjct: 329 ---YCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCGGKL-DEAEELLNGAIARGF 384

Query: 197 VANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALA 256
              +  +  LI+  CK+  +D   ++   M   + + DL  Y  LI +  KK    EA  
Sbjct: 385 TPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKE 444

Query: 257 VQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR--DIKGATPNHVTYTTLIDGYC 314
             + M   G++P++VTY S+I G+C+ G +  A  +F+  + +G  PN  TY +LI G  
Sbjct: 445 TLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLI 504

Query: 315 RANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNV 374
           +   L +A+ L   M   G+ PGV+TY ++++  CK+    +A RL   M +  + PD  
Sbjct: 505 QDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQ 564

Query: 375 TCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGM 434
             N L +A CK G    A      ++  G++L + TY +L+ GF KA   D A  L+  M
Sbjct: 565 AYNVLTDALCKSGRAEEAYSF---LVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKM 621

Query: 435 LDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKV 494
           ++ G      +YS L+   C +      L +LD+    G+  ++  Y  +I    K+ K 
Sbjct: 622 VNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKH 681

Query: 495 DYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSF 554
           D+A+ LFN M  +G    +  YT    +Y + G  +    ++ +M R  +   +  Y  F
Sbjct: 682 DHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIF 741



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 151/599 (25%), Positives = 241/599 (40%), Gaps = 71/599 (11%)

Query: 28  KLLNPNIASSLTSTAIHKVLLNLYNC-CHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIH 86
           +LLN  IA   T T I     NL N  C    +  A    +     N K  LQ++  +I+
Sbjct: 374 ELLNGAIARGFTPTVI--TFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLIN 431

Query: 87  ILTKNKHFKSAQNMLEKIALR----DFLSTPSVLNALVKI--------------HDDPDG 128
           +L K    K A+  L ++       + ++  S+++   K+              H+    
Sbjct: 432 VLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHP 491

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N+     L+      K     + +  +M+   + P +   T L+    K    D  ++++
Sbjct: 492 NAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLF 551

Query: 189 KKMVQLGVVANIHLYNVLIHACCKS-----------------------SDVDKVEK---- 221
           + M Q G+  +   YNVL  A CKS                       S VD   K    
Sbjct: 552 EMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNT 611

Query: 222 -----LLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSL 276
                L+ +M  +  +ADL+TY+ L+   CK+    EAL++ D+M   G+  +IV Y  +
Sbjct: 612 DFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTII 671

Query: 277 IHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGV 334
           I    +EG+   A+ LF ++   G  P+  TYT  I  YC+   +EEA  L   M   GV
Sbjct: 672 ISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEMERDGV 731

Query: 335 YPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG------- 387
            P VVTYN  +      G I  A   L  M +    P+  T   L+  + K+        
Sbjct: 732 TPDVVTYNIFINGCGHMGYIDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYV 791

Query: 388 DTAS---------AMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAG 438
           DT+            ++  RM++ GL     TY ++I GFCKA  ++ A  LL  ML   
Sbjct: 792 DTSGMWNWIELNMVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKD 851

Query: 439 FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQ 498
            SP+   Y+ L+   C+       +  + + +  G    +  Y  LI   C +   D A+
Sbjct: 852 ISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAK 911

Query: 499 RLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSAS 557
            LF  + G     + V +  L     +AG    CS +L  M  R   I  + Y   + S
Sbjct: 912 SLFCDLLGMDYNHNEVAWKILNDGLLKAGHVDFCSQLLAAMDNRHCRIDSESYSMLTDS 970



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 72/250 (28%), Positives = 117/250 (46%), Gaps = 2/250 (0%)

Query: 318 DLEEAL-RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTC 376
           D+ E + +L   +  +G+ P  VTYN+++   CK+G +  A+R    + E  +  D  TC
Sbjct: 158 DMTEYMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTC 217

Query: 377 NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD 436
           N L+  YC+  D   A  +   M   G   ++++Y  LI G C+A+ +  A  L+F M+ 
Sbjct: 218 NALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCEARCVREALVLVFMMVH 277

Query: 437 AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDY 496
            G S +  +Y+ L+ G C +        LLDE   RG+   V  Y A+I  +CK  ++  
Sbjct: 278 DGCSLNLHTYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKD 337

Query: 497 AQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSA 556
           A  +  LM+ NG   D   Y SL Y     G+     ++L+    R    T+  + +   
Sbjct: 338 ALGIKALMEQNGCNPDDWTYNSLIYGLC-GGKLDEAEELLNGAIARGFTPTVITFTNLIN 396

Query: 557 SYAKDNEILD 566
            Y K   I D
Sbjct: 397 GYCKAERIDD 406


>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
          Length = 585

 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 127/474 (26%), Positives = 225/474 (47%), Gaps = 16/474 (3%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           SVL  ++K+   PD  +   + L+          D L +FD+M      P++     L+N
Sbjct: 123 SVLAKILKLGLQPD--TATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLIN 180

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
            L K   T+   ++ + M Q     ++ +Y  +I + CK   V +   L  +M  + +  
Sbjct: 181 GLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISP 240

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRL- 292
           D+FTY +LI   C          + ++M    I PD+V +++++   C+EG++ EA  + 
Sbjct: 241 DIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVV 300

Query: 293 -FRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
               I+G  PN VTY  L+DG+C  ++++EA+++ + M   G  P V++YN+++   CK 
Sbjct: 301 DMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKI 360

Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
            R+  A  L  EM +K++ P+ VT NTL++  C +G    A+ + + M+  G + D  TY
Sbjct: 361 QRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATY 420

Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
           + L+   CK   +D A  LL  +  +   P    Y+ ++DG C     EA   +     S
Sbjct: 421 RILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSS 480

Query: 472 RGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKA 531
           +GL  +V  Y  +I   C++  +D A +LF  M GNG   D   Y ++     +  E   
Sbjct: 481 KGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALR 540

Query: 532 CSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKE 585
              +L +M          + R FSA  +    ++++     +D+ +  K I  E
Sbjct: 541 AIQLLQEM----------LARGFSADVSTTTLLVEMLCDDKLDQSV--KQILSE 582



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 137/497 (27%), Positives = 233/497 (46%), Gaps = 20/497 (4%)

Query: 57  PSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVL 116
           PS S   F     ++P Y  SL SH           H KS    L    L D LS+    
Sbjct: 12  PSSSPPGFGTCVLSLPPYFSSL-SH--------NRFHSKS----LNFNTLDDALSS---F 55

Query: 117 NALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLA 176
           N ++ +H  P  ++   + L+   A  K       + +QM    + P ++   +L+NS  
Sbjct: 56  NRMLHMHPPP--STVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFC 113

Query: 177 KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLF 236
                   + V  K+++LG+  +   +  LI   C    +     L  +M  +  + ++ 
Sbjct: 114 HLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVV 173

Query: 237 TYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI 296
           TY TLI   CK G    A+ +   ME+    PD+V Y S+I   C++ ++ EA  LF  +
Sbjct: 174 TYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKM 233

Query: 297 --KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRI 354
             +G +P+  TYT+LI   C   + +    L   M    + P VV +++++  LCKEG+I
Sbjct: 234 VGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKI 293

Query: 355 RDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKAL 414
            +A+ +++ M  + + P+ VT N L++ +C   +   A+KV + M+  G   +  +Y  L
Sbjct: 294 TEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTL 353

Query: 415 IHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGL 474
           I+G+CK + MD A  L   M      P+  +Y+ L+ G C+    +  + L  E V+ G 
Sbjct: 354 INGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQ 413

Query: 475 CVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSD 534
             D++ YR L+   CKK  +D A  L   ++G+ +  D  IYT +     RAGE +A  D
Sbjct: 414 IPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARD 473

Query: 535 ILDDMYRRRLMITLKIY 551
           I  ++  + L   ++ Y
Sbjct: 474 IFSNLSSKGLRPNVRTY 490



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 91/319 (28%), Positives = 152/319 (47%), Gaps = 2/319 (0%)

Query: 238 YNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK 297
           +N L+    K   +    ++ ++M+  GI PD+ T N LI+ FC   R   A  +   I 
Sbjct: 70  FNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRPGFAFSVLAKIL 129

Query: 298 --GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIR 355
             G  P+  T+TTLI G C    + +AL L + M  +G  P VVTY +++  LCK G   
Sbjct: 130 KLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTN 189

Query: 356 DANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALI 415
            A RLL  M +    PD V   ++I++ CK      A  + ++M+  G+  D FTY +LI
Sbjct: 190 AAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLI 249

Query: 416 HGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLC 475
           H  C   E      LL  M+++   P    +S +VD  C +        ++D  + RG+ 
Sbjct: 250 HSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVE 309

Query: 476 VDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDI 535
            +V  Y AL+   C + ++D A ++F+ M  NG   + + Y +L   Y +       + +
Sbjct: 310 PNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYL 369

Query: 536 LDDMYRRRLMITLKIYRSF 554
            ++M ++ L+     Y + 
Sbjct: 370 FEEMCQKELIPNTVTYNTL 388



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 91/321 (28%), Positives = 162/321 (50%), Gaps = 2/321 (0%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           + +QM    +MP +   + ++++L K+        V   M+  GV  N+  YN L+   C
Sbjct: 264 LLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHC 323

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
             S++D+  K+   M       ++ +YNTLI  YCK     +A  + + M ++ + P+ V
Sbjct: 324 LQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTV 383

Query: 272 TYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           TYN+L+HG C  GR+++A  LF ++   G  P+  TY  L+D  C+ + L+EA+ L + +
Sbjct: 384 TYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTI 443

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
               + P +  Y  ++  +C+ G +  A  + + ++ K + P+  T   +IN  C+ G  
Sbjct: 444 EGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLL 503

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
             A K+   M   G   D  TY  +  G  + KE   A +LL  ML  GFS    + + L
Sbjct: 504 DEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLL 563

Query: 450 VDGYCNKNNEEALLKLLDEFV 470
           V+  C+   ++++ ++L EFV
Sbjct: 564 VEMLCDDKLDQSVKQILSEFV 584



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 78/310 (25%), Positives = 139/310 (44%), Gaps = 2/310 (0%)

Query: 253 EALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR--DIKGATPNHVTYTTLI 310
           +AL+  +RM      P  V +N L+    +  +      L    D  G  P+  T   LI
Sbjct: 50  DALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILI 109

Query: 311 DGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIA 370
           + +C  N    A  +   +   G+ P   T+ +++R LC EG+I DA  L ++M  +   
Sbjct: 110 NSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQ 169

Query: 371 PDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL 430
           P+ VT  TLIN  CK+G+T +A+++   M +     D   Y ++I   CK +++  A  L
Sbjct: 170 PNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNL 229

Query: 431 LFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCK 490
              M+  G SP   +Y+ L+   CN    + +  LL++ ++  +  DV ++  ++   CK
Sbjct: 230 FSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCK 289

Query: 491 KEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKI 550
           + K+  A  + ++M   G+  + V Y +L   +    E      + D M        +  
Sbjct: 290 EGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVIS 349

Query: 551 YRSFSASYAK 560
           Y +    Y K
Sbjct: 350 YNTLINGYCK 359



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 75/250 (30%), Positives = 117/250 (46%)

Query: 317 NDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTC 376
           N L++AL     M      P  V +N +L  + K  +      L N+M+   I PD  T 
Sbjct: 46  NTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTL 105

Query: 377 NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD 436
           N LIN++C +     A  V  ++L+ GL  D  T+  LI G C   ++  A  L   M+ 
Sbjct: 106 NILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIG 165

Query: 437 AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDY 496
            GF P+  +Y  L++G C   N  A ++LL          DV VY ++I   CK  +V  
Sbjct: 166 EGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTE 225

Query: 497 AQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSA 556
           A  LF+ M G GI  D   YTSL ++     E K  + +L+ M   ++M  + I+ +   
Sbjct: 226 AFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVD 285

Query: 557 SYAKDNEILD 566
           +  K+ +I +
Sbjct: 286 ALCKEGKITE 295



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 63/264 (23%), Positives = 110/264 (41%)

Query: 301 PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRL 360
           P+ V +  L+    +         L   M + G+ P V T N ++   C   R   A  +
Sbjct: 65  PSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRPGFAFSV 124

Query: 361 LNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCK 420
           L ++ +  + PD  T  TLI   C  G    A+ + ++M+  G   +  TY  LI+G CK
Sbjct: 125 LAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCK 184

Query: 421 AKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSV 480
               + A  LL  M      P    Y+ ++D  C          L  + V +G+  D+  
Sbjct: 185 VGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFT 244

Query: 481 YRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMY 540
           Y +LI   C   +  +   L N M  + I+ D VI++++  A  + G+     D++D M 
Sbjct: 245 YTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMI 304

Query: 541 RRRLMITLKIYRSFSASYAKDNEI 564
            R +   +  Y +    +   +E+
Sbjct: 305 IRGVEPNVVTYNALMDGHCLQSEM 328



 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 51/202 (25%), Positives = 84/202 (41%), Gaps = 3/202 (1%)

Query: 392 AMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVD 451
           A+   NRML          +  L+    K K+      L   M   G  P   + + L++
Sbjct: 51  ALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILIN 110

Query: 452 GYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILG 511
            +C+ N       +L + +  GL  D + +  LIR  C + K+  A  LF+ M G G   
Sbjct: 111 SFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQP 170

Query: 512 DSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLF--W 569
           + V Y +L     + G   A   +L  M +      + +Y S   S  KD ++ + F  +
Sbjct: 171 NVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLF 230

Query: 570 SHVVDRGLMSKHIFKEMQLRNS 591
           S +V +G+ S  IF    L +S
Sbjct: 231 SKMVGQGI-SPDIFTYTSLIHS 251


>gi|53793262|dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 713

 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 141/532 (26%), Positives = 256/532 (48%), Gaps = 40/532 (7%)

Query: 86  HILTKNKHFKSAQNMLEK-IALRDFLSTPSVLN----ALVKIHDDPDGNSHVLSWLVIFY 140
           H+L +++ +  ++ +L + +ALR      S+++    A + +       + V+  L+   
Sbjct: 73  HLLARDRLYAHSRRVLSRLVALRRPHLAASLVDLLHRAALALGPRRSALASVVDTLLSVL 132

Query: 141 ANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYK----------- 189
           A+  +  D ++   ++R   + P+   C  +L  LA+DR   +V ++++           
Sbjct: 133 ADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLPAPNVFTFN 192

Query: 190 --------------------KMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFK 229
                               +M ++G + ++  +N LI    K  ++D+VE+L+ EM   
Sbjct: 193 IVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRS 252

Query: 230 DVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA 289
             +AD+ TYN LI  +CK G    A      M+REG+  ++VT+++ +  FC+EG +REA
Sbjct: 253 GCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREA 312

Query: 290 RRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRK 347
            +LF    ++G   N  TYT LIDG C+A  L++A+ L + M  +GV   VVTY  ++  
Sbjct: 313 MKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDG 372

Query: 348 LCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLD 407
           LCKE ++ +A  +L  M +  +  + +   TLI+ +    ++  A+ + + M   GL LD
Sbjct: 373 LCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELD 432

Query: 408 QFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLD 467
              Y ALI G C   ++D AK LL  M ++G  P+Y  Y+ ++D           + +L 
Sbjct: 433 ISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQ 492

Query: 468 EFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
           + +  G   +V  Y ALI   CK   +D A   FN M+  G+  +   YT+L     + G
Sbjct: 493 KILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNG 552

Query: 528 EPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFW--SHVVDRGL 577
                  + ++M  + + +   +Y +    Y K   + D F   + ++D GL
Sbjct: 553 CLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGL 604



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 119/428 (27%), Positives = 200/428 (46%), Gaps = 37/428 (8%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           Q+ ++MR       +     L+N   K    +  +  +  M + GV+AN+  ++  + A 
Sbjct: 244 QLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAF 303

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           CK   V +  KL  +M  + +  + FTY  LI   CK G   +A+ + D M R+G+  ++
Sbjct: 304 CKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNV 363

Query: 271 VTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREV 328
           VTY  L+ G C+E ++ EA  + R ++  G   N + YTTLI G+    + E+AL L   
Sbjct: 364 VTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSE 423

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M  KG+   +  Y ++++ LC   ++ +A  LL +M+E  + P+ +   T+++A  K G 
Sbjct: 424 MKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGK 483

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
              A+ +  ++L++G   +  TY ALI G CKA  +D A      M D G  P+  +Y+ 
Sbjct: 484 VPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTA 543

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRAL------------------------ 484
           LVDG C        ++L +E V +G+ +D  VY AL                        
Sbjct: 544 LVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSG 603

Query: 485 -----------IRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACS 533
                      I  FC    +  A+ +F+ M G+GI  D  +Y  L   Y + G  +   
Sbjct: 604 LQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAI 663

Query: 534 DILDDMYR 541
            + D+M R
Sbjct: 664 SLQDEMER 671



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 102/324 (31%), Positives = 163/324 (50%), Gaps = 2/324 (0%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D + + D+M    +  ++   TVL++ L K+R       V + M + GV AN  LY  LI
Sbjct: 346 DAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLI 405

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           H    + + +K   LL EM+ K +  D+  Y  LI   C      EA ++  +M+  G+ 
Sbjct: 406 HGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLE 465

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
           P+ + Y +++    + G++ EA  + + I   G  PN +TY  LIDG C+A  ++EA+  
Sbjct: 466 PNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISH 525

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
              M   G+ P V  Y +++  LCK G + +A +L NEM  K ++ D V    L++ Y K
Sbjct: 526 FNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLK 585

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            G+   A  +K +M+++GL LD F Y   I GFC    M  A+E+   M+  G +P    
Sbjct: 586 QGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAV 645

Query: 446 YSWLVDGYCNKNNEEALLKLLDEF 469
           Y+ L+  Y    N E  + L DE 
Sbjct: 646 YNCLISKYQKLGNLEEAISLQDEM 669



 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 65/249 (26%), Positives = 105/249 (42%), Gaps = 22/249 (8%)

Query: 65  KWAESAV-PNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIH 123
           K  ES + PNY      + TM+    K+     A  ML+KI    F   P+V+     I 
Sbjct: 458 KMDESGLEPNYI----IYTTMMDACFKSGKVPEAIAMLQKILDSGF--QPNVITYCALI- 510

Query: 124 DDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDM 183
              DG     S             + +  F++MR   L P++ A T L++ L K+   + 
Sbjct: 511 ---DGLCKAGSI-----------DEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNE 556

Query: 184 VWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIA 243
             +++ +MV  G+  +  +Y  L+    K  ++     L  +M    ++ DLF Y   I+
Sbjct: 557 AVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFIS 616

Query: 244 LYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGATPNH 303
            +C   M  EA  V   M   GI+PD   YN LI  + + G + EA  L  +++   P+ 
Sbjct: 617 GFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEMERVLPSC 676

Query: 304 VTYTTLIDG 312
               T  D 
Sbjct: 677 TDSDTATDA 685


>gi|356524676|ref|XP_003530954.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g12700, mitochondrial-like
           [Glycine max]
          Length = 555

 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 142/511 (27%), Positives = 249/511 (48%), Gaps = 34/511 (6%)

Query: 13  FIKTISAIMLKGHWAKLLNPNIASSLTSTAIHK---VLLNLYNC-CHIPSLSCAFFKWAE 68
           F K + AI+  GH+   ++  + S L S  I      L  L NC CH   LS AF     
Sbjct: 58  FDKLLGAIVRMGHYPTAIS--LFSQLHSKGITPSIATLTILINCYCHQAHLSFAFSLLGT 115

Query: 69  SAVPNYKHSLQSHWTMIHILTKNKHFKSAQ----NMLEKIALRDFLSTPSVLNALVKIHD 124
                ++ ++ +  T+I+    N     A     +++ K    D  S  S++N L K   
Sbjct: 116 ILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFSYGSLINGLCK--- 172

Query: 125 DPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMV 184
             +G                 T+D LQ+  +M    + P+L   + +++ L KDRL    
Sbjct: 173 --NGQ----------------TRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADA 214

Query: 185 WKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIAL 244
            +++  +   G++ ++  YN LIH CC      +  +LL  M   ++  D +T+N L+  
Sbjct: 215 LRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDA 274

Query: 245 YCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPN 302
            CK+G   EA  V   M + G  PDIVTYN+L+ GFC    + EAR LF  +  +G  P+
Sbjct: 275 LCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPD 334

Query: 303 HVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLN 362
            + Y  LI+GYC+ + ++EA+ L + +  K + P + TYNS++  LCK GR+     L++
Sbjct: 335 VLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVD 394

Query: 363 EMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAK 422
           EM ++  +PD VT N  ++A+CK      A+ +  ++++ G+  D + Y  ++  FCK +
Sbjct: 395 EMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIVQ-GIWPDFYMYDVIVENFCKGE 453

Query: 423 EMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYR 482
           ++ IA+E L  +L  G  P+  +Y+ +++  C   + +  + LL +        D   + 
Sbjct: 454 KLKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDNDCPPDAVTFE 513

Query: 483 ALIRRFCKKEKVDYAQRLFNLMQGNGILGDS 513
            +I    ++ + D A++L   M   G++ D 
Sbjct: 514 TIIGALQERNETDKAEKLRLEMIERGLVNDE 544



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 112/381 (29%), Positives = 192/381 (50%), Gaps = 2/381 (0%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D L  F++M   +  P +     LL ++ +         ++ ++   G+  +I    +LI
Sbjct: 38  DTLLSFNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILI 97

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           +  C  + +     LL  +     + ++ T+NTLI  +C  GM  +A+A +  +  +G  
Sbjct: 98  NCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYP 157

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDIKG--ATPNHVTYTTLIDGYCRANDLEEALRL 325
            D  +Y SLI+G C+ G+ R+A +L + ++     PN +TY+T+IDG C+   + +ALRL
Sbjct: 158 LDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRL 217

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
             ++ ++G+   VV YNS++   C  G+ R+A RLL  M    I PD+ T N L++A CK
Sbjct: 218 FSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCK 277

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            G    A  V   M++ G   D  TY AL+ GFC +  +  A+EL   M+  G  P   +
Sbjct: 278 EGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLN 337

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+ L++GYC  +  +  + L  E   + L  +++ Y +LI   CK  ++   Q L + M 
Sbjct: 338 YNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMC 397

Query: 506 GNGILGDSVIYTSLAYAYWRA 526
             G   D V Y     A+ ++
Sbjct: 398 DRGQSPDIVTYNIFLDAFCKS 418



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 112/415 (26%), Positives = 195/415 (46%), Gaps = 3/415 (0%)

Query: 149 GLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIH 208
            + +F Q+    + P +   T+L+N           + +   ++++G   N+  +N LI+
Sbjct: 74  AISLFSQLHSKGITPSIATLTILINCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLIN 133

Query: 209 ACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISP 268
             C +  V K      ++  K    D F+Y +LI   CK G   +AL +  +ME + + P
Sbjct: 134 GFCINGMVSKAMAFRLDLMAKGYPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRP 193

Query: 269 DIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLR 326
           +++TY+++I G C++  + +A RLF  +  +G   + V Y +LI G C      EA RL 
Sbjct: 194 NLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLL 253

Query: 327 EVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKI 386
            +M    + P   T+N ++  LCKEGRI +A  +   M ++   PD VT N L+  +C  
Sbjct: 254 TMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLS 313

Query: 387 GDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSY 446
            + + A ++ NRM++ GL  D   Y  LI+G+CK   +D A  L   +      P+  +Y
Sbjct: 314 NNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATY 373

Query: 447 SWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQG 506
           + L+DG C       + +L+DE   RG   D+  Y   +  FCK +  + A  LF  +  
Sbjct: 374 NSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIV- 432

Query: 507 NGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKD 561
            GI  D  +Y  +   + +  + K   + L  +        ++ Y     +  KD
Sbjct: 433 QGIWPDFYMYDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCKD 487



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 107/377 (28%), Positives = 179/377 (47%), Gaps = 3/377 (0%)

Query: 171 LLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKD 230
           L+N L K+  T    ++ +KM +  V  N+  Y+ +I   CK   +    +L   +  + 
Sbjct: 166 LINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRG 225

Query: 231 VRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREAR 290
           +  D+  YN+LI   C  G   EA  +   M R  I+PD  T+N L+   C+EGR+ EA+
Sbjct: 226 ILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQ 285

Query: 291 RLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
            +F  +  +G  P+ VTY  L++G+C +N++ EA  L   M  +G+ P V+ YN ++   
Sbjct: 286 GVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGY 345

Query: 349 CKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ 408
           CK   + +A  L  E+  K + P+  T N+LI+  CK+G  +   ++ + M + G   D 
Sbjct: 346 CKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDI 405

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
            TY   +  FCK+K  + A  L F  +  G  P +  Y  +V+ +C     +   + L  
Sbjct: 406 VTYNIFLDAFCKSKPYEKAISL-FRQIVQGIWPDFYMYDVIVENFCKGEKLKIAEEALQH 464

Query: 469 FVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
            +  G C +V  Y  +I   CK    D A  L + M  N    D+V + ++  A     E
Sbjct: 465 LLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDNDCPPDAVTFETIIGALQERNE 524

Query: 529 PKACSDILDDMYRRRLM 545
                 +  +M  R L+
Sbjct: 525 TDKAEKLRLEMIERGLV 541



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 100/375 (26%), Positives = 180/375 (48%), Gaps = 2/375 (0%)

Query: 188 YKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCK 247
           + +M++      I +++ L+ A  +         L  ++  K +   + T   LI  YC 
Sbjct: 43  FNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCH 102

Query: 248 KGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVT 305
           +     A ++   + + G  P++VT+N+LI+GFC  G + +A     D+  KG   +  +
Sbjct: 103 QAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFS 162

Query: 306 YTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMN 365
           Y +LI+G C+     +AL+L + M    V P ++TY++++  LCK+  I DA RL + + 
Sbjct: 163 YGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVT 222

Query: 366 EKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMD 425
            + I  D V  N+LI+  C +G    A ++   M+   +  D +T+  L+   CK   + 
Sbjct: 223 SRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIV 282

Query: 426 IAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
            A+ +   M+  G  P   +Y+ L++G+C  NN     +L +  V RGL  DV  Y  LI
Sbjct: 283 EAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLI 342

Query: 486 RRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
             +CK + VD A  LF  ++   ++ +   Y SL     + G      +++D+M  R   
Sbjct: 343 NGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQS 402

Query: 546 ITLKIYRSFSASYAK 560
             +  Y  F  ++ K
Sbjct: 403 PDIVTYNIFLDAFCK 417



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 77/289 (26%), Positives = 125/289 (43%), Gaps = 4/289 (1%)

Query: 291 RLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
           R+ R  K   P    +  L+    R      A+ L   + +KG+ P + T   ++   C 
Sbjct: 45  RMLR--KHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCH 102

Query: 351 EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
           +  +  A  LL  + +    P+ VT NTLIN +C  G  + AM  +  ++  G  LD+F+
Sbjct: 103 QAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFS 162

Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFV 470
           Y +LI+G CK  +   A +LL  M +    P+  +YS ++DG C        L+L     
Sbjct: 163 YGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVT 222

Query: 471 SRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPK 530
           SRG+ VDV  Y +LI   C   +   A RL  +M    I  D   +  L  A  + G   
Sbjct: 223 SRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIV 282

Query: 531 ACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDL--FWSHVVDRGL 577
               +   M +R     +  Y +    +   N + +    ++ +V RGL
Sbjct: 283 EAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGL 331


>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
           sativus]
          Length = 681

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 137/536 (25%), Positives = 247/536 (46%), Gaps = 38/536 (7%)

Query: 54  CHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTP 113
           C    L  A   + +     ++  + +  T++H L        A ++  ++   + ++  
Sbjct: 123 CSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQMCRPNVVTFT 182

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           +++N L +          V+  + +     +M +DGLQ           P+      +++
Sbjct: 183 TLMNGLCR-------EGRVVEAVALLD---RMVEDGLQ-----------PNQITYGTIVD 221

Query: 174 SLAKDRLTDMVWKVYKKMVQLG-VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVR 232
            + K   T     + +KM ++  +  N+ +Y+ +I    K         L  EM+ K + 
Sbjct: 222 GMCKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIF 281

Query: 233 ADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRL 292
            DLFTYN +I  +C  G   EA  +   M    I+P++VTY++LI+ + +E +  EA  L
Sbjct: 282 PDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEEL 341

Query: 293 FRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
           + ++  +G  PN +TY ++IDG+C+ N L+ A  +  VMA KG  P V T+N+++   C 
Sbjct: 342 YDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCG 401

Query: 351 EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
             RI D   LL+EM E  +  D  T NTLI+ +C +GD  +A+ +  +M+ +G+  D  T
Sbjct: 402 AKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVT 461

Query: 411 YKALIHGFCKAKEMDIAKELLFGM------LDA-----GFSPSYCSYSWLVDGYCNKNNE 459
              L+ G C   ++  A E+   M      LDA     G  P   +Y+ L+ G  N+   
Sbjct: 462 CNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKF 521

Query: 460 EALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
               +L  E   RG+  +   Y ++I   CK+ ++D A ++F+ M       D V + +L
Sbjct: 522 LEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTL 581

Query: 520 AYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI---LDLFWSHV 572
              Y +AG      ++  +M RR ++     Y +    + K   I   LD+F   +
Sbjct: 582 VSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMI 637



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 122/409 (29%), Positives = 205/409 (50%), Gaps = 12/409 (2%)

Query: 187 VYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYC 246
            + K+ +LG   ++  ++ L+H  C    V +   L  +M     R ++ T+ TL+   C
Sbjct: 134 TFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQM----CRPNVVTFTTLMNGLC 189

Query: 247 KKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGAT---PNH 303
           ++G   EA+A+ DRM  +G+ P+ +TY +++ G C+ G    A  L R ++  +   PN 
Sbjct: 190 REGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNV 249

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
           V Y+ +IDG  +     +A  L   M  KG++P + TYN ++   C  GR  +A RLL E
Sbjct: 250 VIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQE 309

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
           M E+KI P+ VT + LINAY K      A ++ + ML  G++ +  TY ++I GFCK   
Sbjct: 310 MLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNR 369

Query: 424 MDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRA 483
           +D A+ + + M   G SP   +++ L+DGYC     +   +LL E    GL  D + Y  
Sbjct: 370 LDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNT 429

Query: 484 LIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRR 543
           LI  FC    ++ A  L   M  +G+  D V   +L       G+ K   ++   M + +
Sbjct: 430 LIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 489

Query: 544 LMITLKIYRSFSASYAKDNEILDLFWSHVVDRG--LMSKHIFKEMQLRN 590
           +   L   R F+     D +  ++  S +++ G  L ++ ++KEM  R 
Sbjct: 490 M--DLDASRPFNG-VEPDVQTYNILISGLINEGKFLEAEELYKEMPHRG 535



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 162/328 (49%), Gaps = 15/328 (4%)

Query: 129 NSHVLSWLVIFYANLKMTQ--DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWK 186
           N +V+++  +  A +K  +  +  +++D+M    ++P+      +++   K    D    
Sbjct: 316 NPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEH 375

Query: 187 VYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYC 246
           ++  M   G   ++  +N LI   C +  +D   +LL EM    + AD  TYNTLI  +C
Sbjct: 376 MFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFC 435

Query: 247 KKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF------------- 293
             G    AL +  +M   G+ PDIVT N+L+ G C  G++++A  +F             
Sbjct: 436 LVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDAS 495

Query: 294 RDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGR 353
           R   G  P+  TY  LI G        EA  L + M  +G+ P  +TY+S++  LCK+ R
Sbjct: 496 RPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSR 555

Query: 354 IRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKA 413
           + +A ++ + M  K  +PD VT NTL++ YCK G     +++   M   G++ D  TY  
Sbjct: 556 LDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYIT 615

Query: 414 LIHGFCKAKEMDIAKELLFGMLDAGFSP 441
           LIHGF K   ++ A ++   M+ +G  P
Sbjct: 616 LIHGFRKVGNINGALDIFQEMISSGVYP 643



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 105/368 (28%), Positives = 170/368 (46%), Gaps = 13/368 (3%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           ++  +M    + P++   + L+N+  K+R      ++Y +M+  G++ N   YN +I   
Sbjct: 305 RLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGF 364

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           CK + +D  E +   M  K    D+FT+NTLI  YC      +   +   M   G+  D 
Sbjct: 365 CKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADT 424

Query: 271 VTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
            TYN+LIHGFC  G +  A  L + +   G  P+ VT  TL+DG C    L++AL + + 
Sbjct: 425 TTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKA 484

Query: 329 MAAK-----------GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCN 377
           M              GV P V TYN ++  L  EG+  +A  L  EM  + I P+ +T +
Sbjct: 485 MQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYS 544

Query: 378 TLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA 437
           ++IN  CK      A ++ + M       D  T+  L+ G+CKA  +D   EL   M   
Sbjct: 545 SMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRR 604

Query: 438 GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYA 497
           G      +Y  L+ G+    N    L +  E +S G+  D    R+++     KE++  A
Sbjct: 605 GIVADAITYITLIHGFRKVGNINGALDIFQEMISSGVYPDTITIRSMLTVLWSKEELKRA 664

Query: 498 QRLFNLMQ 505
             +   +Q
Sbjct: 665 VAMLEDLQ 672



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 65/305 (21%), Positives = 120/305 (39%), Gaps = 34/305 (11%)

Query: 312 GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAP 371
           G+     LE+A+ L   M      P V+ +N ++  + +  R      L  +M  K+I  
Sbjct: 51  GFHEIKGLEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPC 110

Query: 372 DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC----KAKEMDI- 426
           D  + N LI  +C       A+    ++ + G   D  T+  L+HG C     ++ +D+ 
Sbjct: 111 DVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLF 170

Query: 427 --------------------------AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEE 460
                                     A  LL  M++ G  P+  +Y  +VDG C   +  
Sbjct: 171 HQMCRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTV 230

Query: 461 ALLKLLDEFVSRG-LCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
           + L LL +      +  +V +Y A+I    K  +   A  L+  MQ  GI  D   Y  +
Sbjct: 231 SALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCM 290

Query: 520 AYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDL--FWSHVVDRGL 577
              +  +G       +L +M  R++   +  Y +   +Y K+ +  +    +  ++ RG+
Sbjct: 291 IDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGI 350

Query: 578 MSKHI 582
           +   I
Sbjct: 351 IPNTI 355


>gi|115468576|ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|125597608|gb|EAZ37388.1| hypothetical protein OsJ_21726 [Oryza sativa Japonica Group]
          Length = 687

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 141/532 (26%), Positives = 256/532 (48%), Gaps = 40/532 (7%)

Query: 86  HILTKNKHFKSAQNMLEK-IALRDFLSTPSVLN----ALVKIHDDPDGNSHVLSWLVIFY 140
           H+L +++ +  ++ +L + +ALR      S+++    A + +       + V+  L+   
Sbjct: 73  HLLARDRLYAHSRRVLSRLVALRRPHLAASLVDLLHRAALALGPRRSALASVVDTLLSVL 132

Query: 141 ANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYK----------- 189
           A+  +  D ++   ++R   + P+   C  +L  LA+DR   +V ++++           
Sbjct: 133 ADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLPAPNVFTFN 192

Query: 190 --------------------KMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFK 229
                               +M ++G + ++  +N LI    K  ++D+VE+L+ EM   
Sbjct: 193 IVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRS 252

Query: 230 DVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA 289
             +AD+ TYN LI  +CK G    A      M+REG+  ++VT+++ +  FC+EG +REA
Sbjct: 253 GCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREA 312

Query: 290 RRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRK 347
            +LF    ++G   N  TYT LIDG C+A  L++A+ L + M  +GV   VVTY  ++  
Sbjct: 313 MKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDG 372

Query: 348 LCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLD 407
           LCKE ++ +A  +L  M +  +  + +   TLI+ +    ++  A+ + + M   GL LD
Sbjct: 373 LCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELD 432

Query: 408 QFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLD 467
              Y ALI G C   ++D AK LL  M ++G  P+Y  Y+ ++D           + +L 
Sbjct: 433 ISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQ 492

Query: 468 EFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
           + +  G   +V  Y ALI   CK   +D A   FN M+  G+  +   YT+L     + G
Sbjct: 493 KILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNG 552

Query: 528 EPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFW--SHVVDRGL 577
                  + ++M  + + +   +Y +    Y K   + D F   + ++D GL
Sbjct: 553 CLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGL 604



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 119/428 (27%), Positives = 200/428 (46%), Gaps = 37/428 (8%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           Q+ ++MR       +     L+N   K    +  +  +  M + GV+AN+  ++  + A 
Sbjct: 244 QLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAF 303

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           CK   V +  KL  +M  + +  + FTY  LI   CK G   +A+ + D M R+G+  ++
Sbjct: 304 CKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNV 363

Query: 271 VTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREV 328
           VTY  L+ G C+E ++ EA  + R ++  G   N + YTTLI G+    + E+AL L   
Sbjct: 364 VTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSE 423

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M  KG+   +  Y ++++ LC   ++ +A  LL +M+E  + P+ +   T+++A  K G 
Sbjct: 424 MKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGK 483

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
              A+ +  ++L++G   +  TY ALI G CKA  +D A      M D G  P+  +Y+ 
Sbjct: 484 VPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTA 543

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRAL------------------------ 484
           LVDG C        ++L +E V +G+ +D  VY AL                        
Sbjct: 544 LVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSG 603

Query: 485 -----------IRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACS 533
                      I  FC    +  A+ +F+ M G+GI  D  +Y  L   Y + G  +   
Sbjct: 604 LQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAI 663

Query: 534 DILDDMYR 541
            + D+M R
Sbjct: 664 SLQDEMER 671



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 102/324 (31%), Positives = 163/324 (50%), Gaps = 2/324 (0%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D + + D+M    +  ++   TVL++ L K+R       V + M + GV AN  LY  LI
Sbjct: 346 DAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLI 405

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           H    + + +K   LL EM+ K +  D+  Y  LI   C      EA ++  +M+  G+ 
Sbjct: 406 HGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLE 465

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
           P+ + Y +++    + G++ EA  + + I   G  PN +TY  LIDG C+A  ++EA+  
Sbjct: 466 PNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISH 525

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
              M   G+ P V  Y +++  LCK G + +A +L NEM  K ++ D V    L++ Y K
Sbjct: 526 FNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLK 585

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            G+   A  +K +M+++GL LD F Y   I GFC    M  A+E+   M+  G +P    
Sbjct: 586 QGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAV 645

Query: 446 YSWLVDGYCNKNNEEALLKLLDEF 469
           Y+ L+  Y    N E  + L DE 
Sbjct: 646 YNCLISKYQKLGNLEEAISLQDEM 669



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/249 (26%), Positives = 106/249 (42%), Gaps = 22/249 (8%)

Query: 65  KWAESAV-PNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIH 123
           K  ES + PNY      + TM+    K+     A  ML+KI    F   P+V+     I 
Sbjct: 458 KMDESGLEPNYI----IYTTMMDACFKSGKVPEAIAMLQKILDSGF--QPNVITYCALI- 510

Query: 124 DDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDM 183
              DG     S             + +  F++MR   L P++ A T L++ L K+   + 
Sbjct: 511 ---DGLCKAGSI-----------DEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNE 556

Query: 184 VWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIA 243
             +++ +MV  G+  +  +Y  L+    K  ++     L  +M    ++ DLF Y   I+
Sbjct: 557 AVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFIS 616

Query: 244 LYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGATPNH 303
            +C   M  EA  V   M   GI+PD   YN LI  + + G + EA  L  +++   P+ 
Sbjct: 617 GFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEMERVLPSC 676

Query: 304 VTYTTLIDG 312
               T  DG
Sbjct: 677 TDSDTATDG 685


>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
          Length = 582

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 122/389 (31%), Positives = 200/389 (51%), Gaps = 4/389 (1%)

Query: 144 KMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLY 203
           K  ++ + +  +M      P+   CT L++ L KD   D   ++ + M + G  A++ LY
Sbjct: 47  KKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLY 106

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER 263
             LI   C + ++D+ ++L  EM  K + A++ TY+ L+   C+ G   EA  V + M  
Sbjct: 107 GTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAE 166

Query: 264 EGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEE 321
            GI PD+VTY  LI G C++GR   A  L   +  KG  P++VTY  L+ G C+   + +
Sbjct: 167 HGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVID 226

Query: 322 ALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM--NEKKIAPDNVTCNTL 379
           A ++  +M  KG    VVTYN++++ LC +G++ +A +L N M  NE  + P+  T N L
Sbjct: 227 AFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNML 286

Query: 380 INAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGF 439
           I   CK G    A+K+  +M++ G   +  TY  L+ G  KA ++  A EL   +LD GF
Sbjct: 287 IGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGF 346

Query: 440 SPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQR 499
            P+  +YS L+DG+C          L  E  + GL   +  Y  L+   CK+  ++ A+ 
Sbjct: 347 VPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKS 406

Query: 500 LFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
           LF  M       D + + ++     +AG+
Sbjct: 407 LFQEMGNANCEPDIISFNTMIDGTLKAGD 435



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 123/406 (30%), Positives = 203/406 (50%), Gaps = 23/406 (5%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANL--KMTQDGLQVFDQMRVHNLM------PHL 165
           +VLNA+ +    PD         V+ Y  L   + +DG +    M + NLM      P  
Sbjct: 159 TVLNAMAEHGIHPD---------VVTYTGLIDGLCKDG-RATHAMDLLNLMVEKGEEPSN 208

Query: 166 HACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCE 225
               VLL+ L K+ L    +K+ + M++ G  A++  YN L+   C    VD+  KL   
Sbjct: 209 VTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNS 268

Query: 226 MEFKD--VRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCRE 283
           M   +  +  ++FT+N LI   CK+G   +A+ +  +M ++G   ++VTYN L+ G  + 
Sbjct: 269 MFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKA 328

Query: 284 GRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTY 341
           G+++EA  L++ +   G  PN  TY+ LIDG+C+   L  A  L   M   G+ P +  Y
Sbjct: 329 GKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDY 388

Query: 342 NSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLE 401
           N+++  LCKEG +  A  L  EM      PD ++ NT+I+   K GD     +++ +M+E
Sbjct: 389 NTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVE 448

Query: 402 AGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEA 461
            GL  D  T+  LI+   K  E+D AK  L  M+ +GF+P    Y  L+ G  +K +   
Sbjct: 449 MGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTE 508

Query: 462 LLKLLDEFVSRGLCVDVSVYRALIRRFCKK-EKVDYAQRLFNLMQG 506
           ++ LL +  ++G  +D  +   ++   C   ++VD  + L    QG
Sbjct: 509 IINLLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDVMELLPTFFQG 554



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 119/399 (29%), Positives = 190/399 (47%), Gaps = 4/399 (1%)

Query: 170 VLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFK 229
           ++L  L ++        + ++M +  V  +I  YN LI+  CK+  + +   LL EME  
Sbjct: 3   IVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAA 62

Query: 230 DVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA 289
               +  T  TL+   CK G   EA+ + + M+++G   D+V Y +LI GFC  G +   
Sbjct: 63  GCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRG 122

Query: 290 RRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRK 347
           + LF ++  KG + N VTY+ L+ G CR    +EA  +   MA  G++P VVTY  ++  
Sbjct: 123 KELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDG 182

Query: 348 LCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLD 407
           LCK+GR   A  LLN M EK   P NVT N L++  CK G    A K+   M+E G   D
Sbjct: 183 LCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKAD 242

Query: 408 QFTYKALIHGFCKAKEMDIAKELLFGMLDAG--FSPSYCSYSWLVDGYCNKNNEEALLKL 465
             TY  L+ G C   ++D A +L   M D      P+  +++ L+ G C +      +K+
Sbjct: 243 VVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKI 302

Query: 466 LDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWR 525
             + V +G C ++  Y  L+    K  K+  A  L+  +   G + +S  Y+ L   + +
Sbjct: 303 HRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCK 362

Query: 526 AGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
                    +  +M    L   L  Y +  AS  K+  +
Sbjct: 363 MRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSL 401



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 110/331 (33%), Positives = 168/331 (50%), Gaps = 4/331 (1%)

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER 263
           N+++   C++  V +   L+ EM  K V  D+ +YNTLI   CK     EA+ +   ME 
Sbjct: 2   NIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEA 61

Query: 264 EGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEE 321
            G  P+ VT  +L+ G C++GRM EA  L   +  KG   + V Y TLI G+C   +L+ 
Sbjct: 62  AGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDR 121

Query: 322 ALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
              L + M  KG+   VVTY+ ++  LC+ G+ ++AN +LN M E  I PD VT   LI+
Sbjct: 122 GKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLID 181

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
             CK G    AM + N M+E G      TY  L+ G CK   +  A ++L  M++ G   
Sbjct: 182 GLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKA 241

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSV--YRALIRRFCKKEKVDYAQR 499
              +Y+ L+ G C+K   +  LKL +       C++ +V  +  LI   CK+ ++  A +
Sbjct: 242 DVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVK 301

Query: 500 LFNLMQGNGILGDSVIYTSLAYAYWRAGEPK 530
           +   M   G  G+ V Y  L     +AG+ K
Sbjct: 302 IHRKMVKKGSCGNLVTYNMLLGGCLKAGKIK 332



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 110/346 (31%), Positives = 169/346 (48%), Gaps = 6/346 (1%)

Query: 239 NTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK- 297
           N ++   C+ G  +EA+ +   M R+ +SPDIV+YN+LI+G C+  +++EA  L  +++ 
Sbjct: 2   NIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEA 61

Query: 298 -GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRD 356
            G  PN VT TTL+DG C+   ++EA+ L E M  KG    VV Y +++   C  G +  
Sbjct: 62  AGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDR 121

Query: 357 ANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIH 416
              L +EM  K I+ + VT + L++  C++G    A  V N M E G+  D  TY  LI 
Sbjct: 122 GKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLID 181

Query: 417 GFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCV 476
           G CK      A +LL  M++ G  PS  +Y+ L+ G C +       K+L   + +G   
Sbjct: 182 GLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKA 241

Query: 477 DVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYT--SLAYAYWRAGEPKACSD 534
           DV  Y  L++  C K KVD A +LFN M  N    +  ++T   L     + G       
Sbjct: 242 DVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVK 301

Query: 535 ILDDMYRRRLMITLKIYRSFSASYAKDNEILDL--FWSHVVDRGLM 578
           I   M ++     L  Y        K  +I +    W  V+D G +
Sbjct: 302 IHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFV 347



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 123/480 (25%), Positives = 210/480 (43%), Gaps = 29/480 (6%)

Query: 83  TMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYAN 142
           T++  L K+     A  +LE +  + F                 D +  +   L+  + N
Sbjct: 73  TLMDGLCKDGRMDEAMELLEAMKKKGF-----------------DADVVLYGTLISGFCN 115

Query: 143 LKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWK----VYKKMVQLGVVA 198
                 G ++FD+M    +  ++   + L++ L   RL    WK    V   M + G+  
Sbjct: 116 NGNLDRGKELFDEMLGKGISANVVTYSCLVHGLC--RLGQ--WKEANTVLNAMAEHGIHP 171

Query: 199 NIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQ 258
           ++  Y  LI   CK         LL  M  K       TYN L++  CK+G+  +A  + 
Sbjct: 172 DVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKIL 231

Query: 259 DRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI----KGATPNHVTYTTLIDGYC 314
             M  +G   D+VTYN+L+ G C +G++ EA +LF  +        PN  T+  LI G C
Sbjct: 232 RMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLC 291

Query: 315 RANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNV 374
           +   L +A+++   M  KG    +VTYN +L    K G+I++A  L  ++ +    P++ 
Sbjct: 292 KEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSF 351

Query: 375 TCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGM 434
           T + LI+ +CK+     A  +   M   GL    F Y  L+   CK   ++ AK L   M
Sbjct: 352 TYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEM 411

Query: 435 LDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKV 494
            +A   P   S++ ++DG     + + + +L  + V  GL  D   +  LI R  K  ++
Sbjct: 412 GNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGEL 471

Query: 495 DYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSF 554
           D A+     M  +G   D+++Y SL       G+     ++L  M  +  ++  KI  + 
Sbjct: 472 DEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTI 531



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 56/236 (23%), Positives = 113/236 (47%), Gaps = 2/236 (0%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           ++ ++++ Q+     +P+    ++L++   K R+ ++   ++ +M   G+   +  YN L
Sbjct: 332 KEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTL 391

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           + + CK   +++ + L  EM   +   D+ ++NT+I    K G       +Q +M   G+
Sbjct: 392 MASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGL 451

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
            PD +T+++LI+   + G + EA+     +   G TP+ + Y +L+ G     D  E + 
Sbjct: 452 RPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIIN 511

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLI 380
           L   MAAKG        ++IL  LC   +  D   LL    +      +++CN L+
Sbjct: 512 LLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDVMELLPTFFQGTSEGASISCNELL 567


>gi|357439843|ref|XP_003590199.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479247|gb|AES60450.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 834

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 131/441 (29%), Positives = 213/441 (48%), Gaps = 6/441 (1%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           + +F +M +H +  +     +L+NS    R  +  + V+ K+++LG   +I  Y  LI  
Sbjct: 69  IHLFQRMELHGIQSNYITLNILINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRG 128

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
            C +  V +       +  + ++ D  +Y TLI   CK G    AL +  ++E E   PD
Sbjct: 129 LCLNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPD 188

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLRE 327
           +V YN++I G C++  +R+A  L+ ++  K   PN VTYT+LI G+C    L++A  L  
Sbjct: 189 VVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLN 248

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
            M  K V P V T+N+++  LCKEG++R+A  L+  M ++ + PD  T N L++ Y  + 
Sbjct: 249 EMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVK 308

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
           +   A  V N M + G+  D  +Y  +I G  K K +D A +L  GM +    P   +YS
Sbjct: 309 EAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYS 368

Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGN 507
            L+DG C      + LK +DE   RG   +V  Y +LI   CK  +VD A  L   ++  
Sbjct: 369 SLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQ 428

Query: 508 GILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKD---NEI 564
           GI  +   Y  L     + G       +  D+  +   + +  Y        K+   +E 
Sbjct: 429 GIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEA 488

Query: 565 LDLFWSHVVDRGLMSKHIFKE 585
           L L  S + D+G +   I  E
Sbjct: 489 LTLL-SKMEDKGCVPDAIAYE 508



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 125/459 (27%), Positives = 214/459 (46%), Gaps = 29/459 (6%)

Query: 76  HSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSW 135
           H +QS++  ++IL  +              LR   S  SV   ++K+   PD        
Sbjct: 78  HGIQSNYITLNILINSY-----------CHLRQINSAFSVFAKILKLGYQPD-------- 118

Query: 136 LVIFYANL-------KMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
            +I Y  L          ++ L   D++    +     +   L+N L K   T    ++ 
Sbjct: 119 -IITYTTLIRGLCLNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCKIGQTGPALRLL 177

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
           +K+       ++ +YN +I   CK   V     L CEM  K V  ++ TY +LI  +C  
Sbjct: 178 RKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIV 237

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTY 306
           G   +A  + + M  + ++P++ T+N+L+ G C+EG+MREA+ L   +  +G  P+  TY
Sbjct: 238 GQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTY 297

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
             L+DGY    +  +A  +  +MA  GV   V +Y+ ++  L K   + +A  L   M  
Sbjct: 298 NALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRN 357

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
           + + PD V  ++LI+  CK G   SA+K  + M + G   +  TY +LI   CK+ ++D 
Sbjct: 358 ENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDK 417

Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
           A  LL  + D G   +  +Y+ LVDG C         K+  + + +G  VDV  Y  +I 
Sbjct: 418 AIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMIN 477

Query: 487 RFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWR 525
             CK+   D A  L + M+  G + D++ Y ++  A++ 
Sbjct: 478 GLCKESLFDEALTLLSKMEDKGCVPDAIAYETIINAFFE 516



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 127/473 (26%), Positives = 213/473 (45%), Gaps = 67/473 (14%)

Query: 46  VLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIA 105
           +L+N Y  CH+  ++ AF  +A+     Y+  + ++ T+I  L  N   K + N  +++ 
Sbjct: 89  ILINSY--CHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLV 146

Query: 106 LR----DFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNL 161
            +    D +S  +++N L KI                       T   L++  ++     
Sbjct: 147 SQGIKLDHVSYGTLINGLCKI---------------------GQTGPALRLLRKIEGEIC 185

Query: 162 MPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEK 221
            P +     +++ L KD+L    + +Y +M +  V  N+  Y  LI+  C    +DK   
Sbjct: 186 RPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFG 245

Query: 222 LLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSL----- 276
           LL EM  K+V  ++ T+NTL+   CK+G   EA ++   M +EG+ PD+ TYN+L     
Sbjct: 246 LLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYF 305

Query: 277 ------------------------------IHGFCREGRMREARRLFRDIKG--ATPNHV 304
                                         I G  +   + EA  LF  ++     P+ V
Sbjct: 306 LVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVV 365

Query: 305 TYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM 364
            Y++LIDG C++  +  AL+  + M  +G  P V+TY S++  LCK  ++  A  LL ++
Sbjct: 366 AYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKI 425

Query: 365 NEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEM 424
            ++ I  +  T N L++  CK G    A KV   +L  G  +D  TY  +I+G CK    
Sbjct: 426 KDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLF 485

Query: 425 DIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVD 477
           D A  LL  M D G  P   +Y  +++ +  K+  +   KLL E +    CVD
Sbjct: 486 DEALTLLSKMEDKGCVPDAIAYETIINAFFEKDMNDKAEKLLREMID---CVD 535


>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 915

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 159/528 (30%), Positives = 256/528 (48%), Gaps = 38/528 (7%)

Query: 19  AIMLKGHWAKLLNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSL 78
           +I+ K +W K   P++ S + + +   V  +L++    P  +  F  W  S  P YKHS+
Sbjct: 68  SILSKPNWHKC--PSLKSMVPAISPSHVS-SLFSLDLDPKTALNFSHWI-SQNPRYKHSV 123

Query: 79  QSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVI 138
            S+ +++ +L  N +      ++ KI L    S  SV + L                   
Sbjct: 124 YSYASLLTLLINNGYV----GVVFKIRLLMIKSCDSVADTL------------------- 160

Query: 139 FYANL--KMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGV 196
           F  +L  KM +D  + F+    + L+  +     LLNSLA+  L D + +VY +M++  V
Sbjct: 161 FVLDLCRKMNKD--ESFELK--YKLI--IGCYNTLLNSLARFGLVDEMKQVYMEMLEDKV 214

Query: 197 VANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALA 256
             NI+ YN +++  CK  +V++  + +  +    +  D FTY +LI  YC++     A  
Sbjct: 215 CPNIYTYNKMVNGYCKVGNVEEANQYVSMIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFK 274

Query: 257 VQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYC 314
           V   M  +G   + V Y  LIHG C E R+ EA  LF  +K     P   TYT LI   C
Sbjct: 275 VFKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALC 334

Query: 315 RANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNV 374
            +    EAL L + M  KG+ P + TY  ++  LC + ++  A  LL +M EK + P+ +
Sbjct: 335 GSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVI 394

Query: 375 TCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGM 434
           T N LIN YCK G    A+ V   M    L  +  TY  LI G+CK + +  A  +L  M
Sbjct: 395 TYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCK-RNVHKAMGVLNKM 453

Query: 435 LDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKV 494
           L+    P   +Y+ L+DG C   N ++  +LL     RGL  D   Y ++I   CK ++V
Sbjct: 454 LERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRV 513

Query: 495 DYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRR 542
           + A  LF+ ++   ++ + V+YT+L   Y +AG+      +L+ M  +
Sbjct: 514 EEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSK 561



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 114/394 (28%), Positives = 195/394 (49%), Gaps = 1/394 (0%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           + + +F +M+  +  P +   TVL+ +L           + K+M + G+  NIH Y VLI
Sbjct: 306 EAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLI 365

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
            + C    ++K  +LL +M  K +  ++ TYN LI  YCK+GM  +AL V + ME   + 
Sbjct: 366 DSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLR 425

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI-KGATPNHVTYTTLIDGYCRANDLEEALRLR 326
           P+  TYN LI G+C+    +    L + + +   P+ VTY +LIDG CR+ + + A RL 
Sbjct: 426 PNTRTYNELIKGYCKRNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLL 485

Query: 327 EVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKI 386
            +M  +G+ P   TY S++  LCK  R+ +A  L + + +K + P+ V    LI+ YCK 
Sbjct: 486 SLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKA 545

Query: 387 GDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSY 446
           G    A  +  +ML    + +  T+ ALIHG C   ++  A  L   M+     P+  + 
Sbjct: 546 GKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTD 605

Query: 447 SWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQG 506
           + L+       + +   +   + +S G   D   Y   I+ +C++ ++  A+ +   M+ 
Sbjct: 606 TILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKE 665

Query: 507 NGILGDSVIYTSLAYAYWRAGEPKACSDILDDMY 540
           NG+  D   Y+SL   Y   G   +   +L  M+
Sbjct: 666 NGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMH 699



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 116/384 (30%), Positives = 202/384 (52%), Gaps = 6/384 (1%)

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
           I  YN L+++  +   VD+++++  EM    V  +++TYN ++  YCK G   EA     
Sbjct: 183 IGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVS 242

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRAN 317
            +   G+ PD  TY SLI G+C+   +  A ++F++  +KG   N V YT LI G C   
Sbjct: 243 MIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVER 302

Query: 318 DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCN 377
            ++EA+ L   M     YP V TY  +++ LC   R  +A  L+ EM EK I P+  T  
Sbjct: 303 RIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYT 362

Query: 378 TLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA 437
            LI++ C       A ++  +MLE GLM +  TY ALI+G+CK   ++ A +++  M   
Sbjct: 363 VLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESR 422

Query: 438 GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYA 497
              P+  +Y+ L+ GYC +N  +A + +L++ + R +  DV  Y +LI   C+    D A
Sbjct: 423 NLRPNTRTYNELIKGYCKRNVHKA-MGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSA 481

Query: 498 QRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSAS 557
            RL +LM   G++ D   YTS+  +  ++   +   D+ D + ++ ++  + +Y +    
Sbjct: 482 YRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDG 541

Query: 558 YAKDNEILDLFWSHVVDRGLMSKH 581
           Y K  ++ +   +H++   ++SK+
Sbjct: 542 YCKAGKVNE---AHLMLEKMLSKN 562



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 112/377 (29%), Positives = 186/377 (49%), Gaps = 41/377 (10%)

Query: 116 LNALVKIHDDPDGNSHVLSWLVIFYA--NLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           ++  VK+ DD D    V ++ V+  A    +   + L +  +M    + P++H  TVL++
Sbjct: 308 MDLFVKMKDD-DCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLID 366

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
           SL      +   ++  +M++ G++ N+  YN LI+  CK   ++    ++  ME +++R 
Sbjct: 367 SLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRP 426

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREG--------- 284
           +  TYN LI  YCK+ +H +A+ V ++M    + PD+VTYNSLI G CR G         
Sbjct: 427 NTRTYNELIKGYCKRNVH-KAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLL 485

Query: 285 --------------------------RMREARRLFRDI--KGATPNHVTYTTLIDGYCRA 316
                                     R+ EA  LF  +  K   PN V YT LIDGYC+A
Sbjct: 486 SLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKA 545

Query: 317 NDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTC 376
             + EA  + E M +K   P  +T+N+++  LC +G++++A  L  +M +  + P   T 
Sbjct: 546 GKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTD 605

Query: 377 NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD 436
             LI+   K GD   A +   +ML +G   D  TY   I  +C+   +  A++++  M +
Sbjct: 606 TILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKE 665

Query: 437 AGFSPSYCSYSWLVDGY 453
            G SP   +YS L+ GY
Sbjct: 666 NGVSPDLFTYSSLIKGY 682



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 99/428 (23%), Positives = 181/428 (42%), Gaps = 38/428 (8%)

Query: 80  SHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIF 139
           ++ +MI  L K+K  + A ++ + +  +D +    +  AL+      DG           
Sbjct: 499 TYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALI------DG----------- 541

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
           Y       +   + ++M   N +P+      L++ L  D        + +KMV++ +   
Sbjct: 542 YCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPT 601

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
           +    +LIH   K  D D   +   +M     + D  TY T I  YC++G   +A  +  
Sbjct: 602 VSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVA 661

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLI------- 310
           +M+  G+SPD+ TY+SLI G+   GR   A  + + +   G  P+  T+ +LI       
Sbjct: 662 KMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMK 721

Query: 311 --------DGYCRANDLEE---ALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
                    G C  +++ E    + L E M   GV P   +Y  ++  +C+ G +R A +
Sbjct: 722 YGKVKGGEPGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEK 781

Query: 360 LLNEMNEKK-IAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGF 418
           + + M +K+ I+P  +  N L++  CK+     A KV + M+  G +    + K LI   
Sbjct: 782 VFDHMQQKEGISPSELVFNALLSCCCKLEKHNEAAKVVDDMICVGHLPQLESCKILICRL 841

Query: 419 CKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDV 478
            K  E +    +   +L  G+     ++  ++DG   +   EA  +L +     G     
Sbjct: 842 YKKGEKERGTSVFQNLLQCGYYDDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCTFSS 901

Query: 479 SVYRALIR 486
             Y  LI 
Sbjct: 902 QTYSLLIE 909



 Score =  118 bits (296), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 106/434 (24%), Positives = 184/434 (42%), Gaps = 65/434 (14%)

Query: 156 MRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSD 215
           M    L+P     T +++SL K +  +    ++  + Q  V+ N+ +Y  LI   CK+  
Sbjct: 488 MNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGK 547

Query: 216 VDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNS 275
           V++   +L +M  K+   +  T+N LI   C  G   EA  ++++M +  + P + T   
Sbjct: 548 VNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTI 607

Query: 276 LIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKG 333
           LIH   ++G    A R F+ +   G  P+  TYTT I  YCR   L++A  +   M   G
Sbjct: 608 LIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENG 667

Query: 334 VYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN-----AYCKIGD 388
           V P + TY+S+++     GR   A  +L  M++    P   T  +LI       Y K+  
Sbjct: 668 VSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKG 727

Query: 389 TASAMKVKN-------------RMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGML 435
               + V +             +M+E G+  +  +Y+ L+ G C+   + +A+++   M 
Sbjct: 728 GEPGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQ 787

Query: 436 D-AGFSPSYCSYSWLVDGYC--NKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKE 492
              G SPS   ++ L+   C   K+NE A  K++D+ +  G    +   + LI R  KK 
Sbjct: 788 QKEGISPSELVFNALLSCCCKLEKHNEAA--KVVDDMICVGHLPQLESCKILICRLYKKG 845

Query: 493 K-----------------------------------VDYAQRLFNLMQGNGILGDSVIYT 517
           +                                   V+    LFN+M+ NG       ++
Sbjct: 846 EKERGTSVFQNLLQCGYYDDELAWKIIIDGVGKQGLVEAFYELFNVMEKNG-----CTFS 900

Query: 518 SLAYAYWRAGEPKA 531
           S  Y+    G P +
Sbjct: 901 SQTYSLLIEGPPDS 914


>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
          Length = 624

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 147/496 (29%), Positives = 216/496 (43%), Gaps = 83/496 (16%)

Query: 156 MRVHNLMPHLHAC-------TVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIH 208
           +R  +L PH  AC       TVL+ +L  DRL D    + + M   GV A++  Y  LI 
Sbjct: 100 LRAMSLEPH-PACRPNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIR 158

Query: 209 ACCKSSDVDK-----------------------------------VEKLLCEMEFKDVRA 233
             C +++VDK                                   V K+  EM  K +  
Sbjct: 159 GLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEP 218

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           D+  Y  LI   CK G   +A  V D M R G+ P++VTYN LI+  C+EG ++EA  + 
Sbjct: 219 DVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVL 278

Query: 294 RDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKG---VYPGVVTYNSILRKL 348
           + +  KG  P+ VTY TLI G     +++EA+ L E M  +G   V P VVT+NS+++ L
Sbjct: 279 KKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMV-RGKNIVKPNVVTFNSVIQGL 337

Query: 349 CKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ 408
           C  GR+R A ++   M E     + VT N LI    ++     AM++ + M   GL  D 
Sbjct: 338 CDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDS 397

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS-------------------------- 442
           FTY  LI GFCK  ++D A++LL  M D G  P                           
Sbjct: 398 FTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNE 457

Query: 443 --------YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKV 494
                     +YS ++ G C   + +   +LL   V  GL  D   Y  +I  F K   +
Sbjct: 458 MDNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDM 517

Query: 495 DYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSF 554
           + A  +   M  +G L D  ++ SL   Y   GE     +++ +M  + + +  KI  + 
Sbjct: 518 EAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALDSKIISTL 577

Query: 555 SASYAKDNEILDLFWS 570
           S S    NE   L  S
Sbjct: 578 STSLVASNEGKALLQS 593



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 94/314 (29%), Positives = 158/314 (50%), Gaps = 9/314 (2%)

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMERE---GISPDIVTYNSLIHGFCREGRMREAR 290
           D  +YNT++   C++G H  A A+   M  E      P+ V+Y  L+   C +    +A 
Sbjct: 76  DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAV 135

Query: 291 RLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
            L R ++  G   + VTY TLI G C A ++++A+ L   M   G+ P VV Y+S+L+  
Sbjct: 136 GLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGY 195

Query: 349 CKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ 408
           CK GR  D  ++  EM+EK I PD V    LI++ CK+G    A  V + M+  GL  + 
Sbjct: 196 CKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNV 255

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
            TY  LI+  CK   +  A  +L  M + G +P   +Y+ L+ G  +    +  + LL+E
Sbjct: 256 VTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEE 315

Query: 469 FVSRGLCV---DVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWR 525
            V RG  +   +V  + ++I+  C   ++  A ++  +M+  G + + V Y  L     R
Sbjct: 316 MV-RGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLR 374

Query: 526 AGEPKACSDILDDM 539
             + +   +++D+M
Sbjct: 375 VHKVRKAMELMDEM 388



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 103/363 (28%), Positives = 167/363 (46%), Gaps = 41/363 (11%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           V D M    L P++    VL+N + K+        V KKM + GV  ++  YN LI    
Sbjct: 242 VMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLS 301

Query: 212 KSSDVDKVEKLLCEMEFKD--VRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
              ++D+   LL EM      V+ ++ T+N++I   C  G   +A  V+  ME  G   +
Sbjct: 302 DVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVN 361

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYC------RANDLEE 321
           +VTYN LI G  R  ++R+A  L  ++   G  P+  TY+ LI G+C      RA DL  
Sbjct: 362 LVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLS 421

Query: 322 ALRLREV-------------MAAKGV--------------YP-GVVTYNSILRKLCKEGR 353
            +R R +             M  +G+              +P  VV Y++++   CK G 
Sbjct: 422 TMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDNNFPLDVVAYSTMIHGACKAGD 481

Query: 354 IRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKA 413
           ++ A  LL  + ++ + PD VT + +IN + K GD  +A  V  +M  +G + D   + +
Sbjct: 482 LKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDS 541

Query: 414 LIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEF---V 470
           LI G+    E++   EL+  M+    +      S L       N  +ALL+ L +F   +
Sbjct: 542 LIQGYSTKGEINKVLELIREMITKNIALDSKIISTLSTSLVASNEGKALLQSLPDFSAEI 601

Query: 471 SRG 473
           S+G
Sbjct: 602 SKG 604



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 72/249 (28%), Positives = 113/249 (45%), Gaps = 5/249 (2%)

Query: 339 VTYNSILRKLCKEGRIRDANRLLNEMN-EKKIA--PDNVTCNTLINAYCKIGDTASAMKV 395
           V+YN++L  LC+ G    A  LL  M+ E   A  P+ V+   L+ A C       A+ +
Sbjct: 78  VSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAVGL 137

Query: 396 KNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCN 455
              M  AG+  D  TY  LI G C A E+D A EL+  M ++G  P+   YS L+ GYC 
Sbjct: 138 LRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCK 197

Query: 456 KNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVI 515
               E + K+  E   +G+  DV +Y  LI   CK  K   A  + ++M   G+  + V 
Sbjct: 198 SGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVT 257

Query: 516 YTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDR 575
           Y  L     + G  K    +L  M  + +   +  Y +     +   E+ +  W  +++ 
Sbjct: 258 YNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMW--LLEE 315

Query: 576 GLMSKHIFK 584
            +  K+I K
Sbjct: 316 MVRGKNIVK 324


>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
          Length = 648

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 123/417 (29%), Positives = 212/417 (50%), Gaps = 6/417 (1%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           SVL    K+  +PD  +   S LV  +       + + + D+M      P L   + L+N
Sbjct: 155 SVLGRAWKLGYEPD--TITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLIN 212

Query: 174 SLA-KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVR 232
            L  K R+++ +  +  +MV+ G   +   Y  +++  CKS +      L  +ME ++++
Sbjct: 213 GLCLKGRVSEALVLI-DRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIK 271

Query: 233 ADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRL 292
           A +  Y+ +I   CK G   +AL++ + ME +GI  D+VTY+SLI G C +G+  +  ++
Sbjct: 272 ASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKM 331

Query: 293 FRDIKGAT--PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
            R++ G    P+ VT++ LID + +   L EA  L   M  +G+ P  +TYNS++   CK
Sbjct: 332 LREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCK 391

Query: 351 EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
           E  + +AN++ + M  K   PD VT + LIN+YCK       M++   +   GL+ +  T
Sbjct: 392 ENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTIT 451

Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFV 470
           Y  L+ GFC++ +++ AKEL   M+  G  PS  +Y  L+DG C+       L++ ++  
Sbjct: 452 YNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQ 511

Query: 471 SRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
              + + + +Y  +I   C   KVD A  LF  +   G+  D V Y  +     + G
Sbjct: 512 KSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKG 568



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 113/395 (28%), Positives = 202/395 (51%), Gaps = 2/395 (0%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
            + L + D+M  +   P       +LN L K   + +   +++KM +  + A++  Y+++
Sbjct: 221 SEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIV 280

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           I + CK    D    L  EME K ++AD+ TY++LI   C  G   +   +   M    I
Sbjct: 281 IDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNI 340

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
            PD+VT+++LI  F +EG++ EA+ L+ ++  +G  P+ +TY +LIDG+C+ N L EA +
Sbjct: 341 IPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQ 400

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           + ++M +KG  P +VTY+ ++   CK  R+ D  RL  E++ K + P+ +T NTL+  +C
Sbjct: 401 MFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFC 460

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           + G   +A ++   M+  G+     TY  L+ G C   E++ A E+   M  +  +    
Sbjct: 461 QSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIG 520

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
            Y+ ++ G CN +  +    L      +G+  DV  Y  +I   CKK  +  A  LF  M
Sbjct: 521 IYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKM 580

Query: 505 QGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
           + +G   D   Y  L  A+       +  +++++M
Sbjct: 581 KEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEM 615



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 118/398 (29%), Positives = 193/398 (48%), Gaps = 2/398 (0%)

Query: 156 MRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSD 215
           M ++ +   ++  T+++N   + +     + V  +  +LG   +   ++ L++  C    
Sbjct: 125 MELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGR 184

Query: 216 VDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNS 275
           V +   L+  M     R DL T +TLI   C KG   EAL + DRM   G  PD VTY  
Sbjct: 185 VSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGP 244

Query: 276 LIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKG 333
           +++  C+ G    A  LFR +  +    + V Y+ +ID  C+    ++AL L   M  KG
Sbjct: 245 VLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKG 304

Query: 334 VYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAM 393
           +   VVTY+S++  LC +G+  D  ++L EM  + I PD VT + LI+ + K G    A 
Sbjct: 305 IKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAK 364

Query: 394 KVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGY 453
           ++ N M+  G+  D  TY +LI GFCK   +  A ++   M+  G  P   +YS L++ Y
Sbjct: 365 ELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSY 424

Query: 454 CNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDS 513
           C     +  ++L  E  S+GL  +   Y  L+  FC+  K++ A+ LF  M   G+    
Sbjct: 425 CKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSV 484

Query: 514 VIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIY 551
           V Y  L       GE     +I + M + R+ + + IY
Sbjct: 485 VTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIY 522



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 109/366 (29%), Positives = 188/366 (51%), Gaps = 2/366 (0%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           L +F +M   N+   +   +++++SL KD   D    ++ +M   G+ A++  Y+ LI  
Sbjct: 259 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 318

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
            C     D   K+L EM  +++  D+ T++ LI ++ K+G   EA  + + M   GI+PD
Sbjct: 319 LCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPD 378

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLRE 327
            +TYNSLI GFC+E  + EA ++F  +  KG  P+ VTY+ LI+ YC+A  +++ +RL  
Sbjct: 379 TITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFR 438

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
            +++KG+ P  +TYN+++   C+ G++  A  L  EM  + + P  VT   L++  C  G
Sbjct: 439 EISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNG 498

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
           +   A+++  +M ++ + L    Y  +IHG C A ++D A  L   + D G  P   +Y+
Sbjct: 499 ELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYN 558

Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGN 507
            ++ G C K +      L  +    G   D   Y  LIR       +  +  L   M+  
Sbjct: 559 VMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVC 618

Query: 508 GILGDS 513
           G   DS
Sbjct: 619 GFSADS 624



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 125/456 (27%), Positives = 206/456 (45%), Gaps = 54/456 (11%)

Query: 171 LLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKD 230
           L N +   ++ D +  +++ M+Q   +     +N L  A  ++   D V      ME   
Sbjct: 71  LRNGIVDIKVNDAI-DLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNG 129

Query: 231 VRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREAR 290
           +  D++T   +I  YC+K     A +V  R  + G  PD +T+++L++GFC EGR+ EA 
Sbjct: 130 IEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAV 189

Query: 291 RLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRK- 347
            L   +      P+ VT +TLI+G C    + EAL L + M   G  P  VTY  +L + 
Sbjct: 190 ALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRL 249

Query: 348 ----------------------------------LCKEGRIRDANRLLNEMNEKKIAPDN 373
                                             LCK+G   DA  L NEM  K I  D 
Sbjct: 250 CKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADV 309

Query: 374 VTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFG 433
           VT ++LI   C  G      K+   M+   ++ D  T+ ALI  F K  ++  AKEL   
Sbjct: 310 VTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNE 369

Query: 434 MLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEK 493
           M+  G +P   +Y+ L+DG+C +N      ++ D  VS+G   D+  Y  LI  +CK ++
Sbjct: 370 MITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKR 429

Query: 494 VDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRS 553
           VD   RLF  +   G++ +++ Y +L   + ++G+  A  ++  +M  R +  ++  Y  
Sbjct: 430 VDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTY-- 487

Query: 554 FSASYAKDNEILDLFWSHVVDRGLMSK--HIFKEMQ 587
                        +    + D G ++K   IF++MQ
Sbjct: 488 ------------GILLDGLCDNGELNKALEIFEKMQ 511



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 96/340 (28%), Positives = 170/340 (50%), Gaps = 2/340 (0%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D L +F++M +  +   +   + L+  L  D   D   K+ ++M+   ++ ++  ++ LI
Sbjct: 292 DALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALI 351

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
               K   + + ++L  EM  + +  D  TYN+LI  +CK+   +EA  + D M  +G  
Sbjct: 352 DVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCE 411

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
           PDIVTY+ LI+ +C+  R+ +  RLFR+I  KG  PN +TY TL+ G+C++  L  A  L
Sbjct: 412 PDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKEL 471

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
            + M ++GV P VVTY  +L  LC  G +  A  +  +M + ++       N +I+  C 
Sbjct: 472 FQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCN 531

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
                 A  +   + + G+  D  TY  +I G CK   +  A  L   M + G +P   +
Sbjct: 532 ASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFT 591

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
           Y+ L+  +   +   + ++L++E    G   D S  + +I
Sbjct: 592 YNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVI 631



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 104/400 (26%), Positives = 190/400 (47%), Gaps = 27/400 (6%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALR----DFLSTPSVLNALVKIHDDPDG 128
           N K S+  +  +I  L K+  F  A ++  ++ ++    D ++  S++  L       DG
Sbjct: 269 NIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCN-----DG 323

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
                 W            DG ++  +M   N++P +   + L++   K+       ++Y
Sbjct: 324 K-----W-----------DDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELY 367

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
            +M+  G+  +   YN LI   CK + + +  ++   M  K    D+ TY+ LI  YCK 
Sbjct: 368 NEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKA 427

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTY 306
               + + +   +  +G+ P+ +TYN+L+ GFC+ G++  A+ LF+++  +G  P+ VTY
Sbjct: 428 KRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTY 487

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
             L+DG C   +L +AL + E M    +  G+  YN I+  +C   ++ DA  L   +++
Sbjct: 488 GILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSD 547

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
           K + PD VT N +I   CK G  + A  +  +M E G   D FTY  LI        +  
Sbjct: 548 KGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLIS 607

Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLL 466
           + EL+  M   GFS    +   ++D   ++  +++ L +L
Sbjct: 608 SVELIEEMKVCGFSADSSTIKMVIDMLSDRRLDKSFLDML 647


>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 504

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 134/488 (27%), Positives = 228/488 (46%), Gaps = 28/488 (5%)

Query: 43  IHKVLLNLYNCCHIPSLS-CAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNML 101
           +H+  L + N    P+LS C F  W   A  NY+  L++    +H    N  F  A ++ 
Sbjct: 19  LHRHRLQISNHGASPTLSLCGFCFWIR-AFSNYRKILRNG---LH----NLQFNEALDLF 70

Query: 102 EKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNL 161
            ++                 +H  P  +    + L+   A +K     + +F+QM++  +
Sbjct: 71  TRM-----------------VHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGI 113

Query: 162 MPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEK 221
            P L+ C +++N + +            KM++LG   ++  +  L+H  C  + ++    
Sbjct: 114 SPVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALA 173

Query: 222 LLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFC 281
           L  ++     R ++ TY TLI   CK      A+ + ++M   GI P++VTYNSL+ G C
Sbjct: 174 LFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLC 233

Query: 282 REGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVV 339
             GR  +A  L RD+  +G  PN +T+T LID + +   + EA  L +VM    VYP V 
Sbjct: 234 EIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVF 293

Query: 340 TYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRM 399
           TY +++  LC  GR+ +A ++   M      P+ VT  TLI+ +CK        K+   M
Sbjct: 294 TYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEM 353

Query: 400 LEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNE 459
            + GL+ +  TY  LI G+C     D+A+E+   M      P   +Y+ L+DG C     
Sbjct: 354 SQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYV 413

Query: 460 EALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
           E  L +      R + +++  Y  +I+  CK  KV+ A  LF  +   G+  + + YT++
Sbjct: 414 EKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTM 473

Query: 520 AYAYWRAG 527
              + R G
Sbjct: 474 ISGFCRRG 481



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 107/419 (25%), Positives = 199/419 (47%), Gaps = 2/419 (0%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           + L +F +M     +P +   T LL+ +AK +  D+V  ++++M  LG+   ++  N+++
Sbjct: 65  EALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNIVM 124

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           +  C+SS   +    L +M       DL T+ +L+  +C      +ALA+ D++   G  
Sbjct: 125 NCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFR 184

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
           P++VTY +LIH  C+   +  A  +F  +   G  PN VTY +L+ G C      +A  L
Sbjct: 185 PNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWL 244

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
              M  +G+ P V+T+ +++    K G+I +A  L   M +  + PD  T   LIN  C 
Sbjct: 245 LRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCT 304

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            G    A ++   M   G   ++ TY  LIHGFCK+K ++   ++ + M   G   +  +
Sbjct: 305 YGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTIT 364

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+ L+ GYC     +   ++ ++  SR    D+  Y  L+   C    V+ A  +F  M+
Sbjct: 365 YTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMR 424

Query: 506 GNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
              +  + V YT +     + G+ +   D+   ++ + +   +  Y +  + + +   I
Sbjct: 425 KREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFI 483



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 99/339 (29%), Positives = 173/339 (51%), Gaps = 16/339 (4%)

Query: 254 ALAVQDRMEREGISPDIVTYNSLIHGFCREGR-MREARRLFRDIK-GATPNHVTYTTLID 311
            +++ ++M+  GISP + T N +++  CR  +  R +  L + +K G  P+ VT+T+L+ 
Sbjct: 101 VISLFEQMQILGISPVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLH 160

Query: 312 GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAP 371
           G+C  N +E+AL L + +   G  P VVTY +++  LCK   +  A  + N+M +  I P
Sbjct: 161 GFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRP 220

Query: 372 DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
           + VT N+L++  C+IG  + A  +   M++ G+  +  T+ ALI  F K  ++  AKEL 
Sbjct: 221 NVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELY 280

Query: 432 FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
             M+     P   +Y+ L++G C     +   ++     S G   +   Y  LI  FCK 
Sbjct: 281 KVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKS 340

Query: 492 EKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIY 551
           ++V+   ++F  M   G++ +++ YT L   Y   G P    ++ + M  RR    ++ Y
Sbjct: 341 KRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTY 400

Query: 552 RSFSASYAKDNEILD-LFWSHVVDRGLMSKHIFKEMQLR 589
                     N +LD L ++  V++ LM   IFK M+ R
Sbjct: 401 ----------NVLLDGLCYNGYVEKALM---IFKYMRKR 426



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 87/297 (29%), Positives = 146/297 (49%), Gaps = 4/297 (1%)

Query: 149 GLQVFDQMRVHNLMPHLHACTVLLNSLAK-DRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
            +++F+QM  + + P++     L++ L +  R +D  W + + M++ G+  N+  +  LI
Sbjct: 206 AVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAW-LLRDMMKRGIQPNVITFTALI 264

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
            A  K   + + ++L   M    V  D+FTY  LI   C  G   EA  +   ME  G  
Sbjct: 265 DAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYY 324

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
           P+ VTY +LIHGFC+  R+ +  ++F ++  KG   N +TYT LI GYC     + A  +
Sbjct: 325 PNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEV 384

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
              M ++   P + TYN +L  LC  G +  A  +   M ++++  + VT   +I   CK
Sbjct: 385 FNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCK 444

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +G    A  +   +   G+  +  TY  +I GFC+   +  A  L   M + GF P+
Sbjct: 445 VGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADALFKKMKEDGFLPN 501



 Score = 78.6 bits (192), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 86/177 (48%), Gaps = 2/177 (1%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N    + L+  +   K  +DG ++F +M    L+ +    TVL+         D+  +V+
Sbjct: 326 NEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVF 385

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
            +M       +I  YNVL+   C +  V+K   +   M  +++  ++ TY  +I   CK 
Sbjct: 386 NQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKV 445

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNH 303
           G   +A  +   +  +G+ P+++TY ++I GFCR G + EA  LF+ +K  G  PN 
Sbjct: 446 GKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADALFKKMKEDGFLPNE 502



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 55/226 (24%), Positives = 98/226 (43%)

Query: 341 YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML 400
           Y  ILR      +  +A  L   M   +  P  V    L++   K+      + +  +M 
Sbjct: 50  YRKILRNGLHNLQFNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQ 109

Query: 401 EAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEE 460
             G+    +T   +++  C++ +   A   L  M+  GF P   +++ L+ G+C+ N  E
Sbjct: 110 ILGISPVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIE 169

Query: 461 ALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLA 520
             L L D+ V  G   +V  Y  LI   CK   +++A  +FN M  NGI  + V Y SL 
Sbjct: 170 DALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLV 229

Query: 521 YAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
                 G     + +L DM +R +   +  + +   ++ K  +I++
Sbjct: 230 SGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIME 275



 Score = 39.3 bits (90), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 34/178 (19%), Positives = 69/178 (38%)

Query: 392 AMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVD 451
           A+ +  RM+ +  +     +  L+    K K  D+   L   M   G SP   + + +++
Sbjct: 66  ALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNIVMN 125

Query: 452 GYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILG 511
             C  +        L + +  G   D+  + +L+  FC   +++ A  LF+ + G G   
Sbjct: 126 CVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRP 185

Query: 512 DSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFW 569
           + V YT+L +   +        +I + M    +   +  Y S  +   +     D  W
Sbjct: 186 NVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAW 243


>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 592

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 127/377 (33%), Positives = 193/377 (51%), Gaps = 2/377 (0%)

Query: 142 NLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIH 201
           N     + L  F++M      P +     +L S+A  +    V  + K+M  LG+ ++++
Sbjct: 51  NFNTIDEALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVY 110

Query: 202 LYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRM 261
              ++I++ C  + VD    +L ++     + D  T+ TLI   C +G   EAL + D+M
Sbjct: 111 TLAIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKM 170

Query: 262 EREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDL 319
             EG  P+ VTY +LIHG C+ G  R A RL R +  K   PN +TY T+ID   +   +
Sbjct: 171 VGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQV 230

Query: 320 EEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTL 379
            EAL +   M AKG+ P V TYNSI+  LCK    +    L+NEM + KI P+ V   TL
Sbjct: 231 NEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTL 290

Query: 380 INAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGF 439
           ++A CK G    A  V + M++ G+  D  TY AL+ G C   EMD A ++   M+  G 
Sbjct: 291 VDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGC 350

Query: 440 SPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQR 499
           +P+  SYS L++GYC     +  + L +E   R L  ++  Y  LI   C   ++  A  
Sbjct: 351 APNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIA 410

Query: 500 LFNLMQGNGILGDSVIY 516
           LF+ M  +G + D V Y
Sbjct: 411 LFHEMVASGQIPDLVTY 427



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 135/537 (25%), Positives = 246/537 (45%), Gaps = 21/537 (3%)

Query: 9   SDTKFIKTISAIMLKGHWAKLLN--PNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKW 66
           S   F K +++I    H++ +L+    + S    + ++ + + + + CH+  +   F   
Sbjct: 73  SVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAIVINSFCHLNRVDFGFSVL 132

Query: 67  AESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDP 126
           A+     ++    +  T+I  L        A ++ +K+    F                P
Sbjct: 133 AKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGF---------------QP 177

Query: 127 DGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWK 186
           +G ++    L+     +  ++  +++   M   N  P++     +++ L KDR  +    
Sbjct: 178 NGVTY--GTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALN 235

Query: 187 VYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYC 246
           ++ +M+  G+  N+  YN +IH  CK S+   V  L+ EM    +  ++  + TL+   C
Sbjct: 236 IFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALC 295

Query: 247 KKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHV 304
           K+GM   A  V D M + G+ PD+VTY +L+ G C    M EA ++F  +  KG  PN +
Sbjct: 296 KEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVI 355

Query: 305 TYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM 364
           +Y+TLI+GYC+   +++A+ L E M  + + P +VTYN+++  LC  GR+RDA  L +EM
Sbjct: 356 SYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEM 415

Query: 365 NEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEM 424
                 PD VT   L++  CK      AM +   +  + L  D  +Y  +I G C+  E+
Sbjct: 416 VASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGEL 475

Query: 425 DIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRAL 484
           + A +L   +   G  P   +Y+ +++G C +       KL  E  + G   D   Y  +
Sbjct: 476 EAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLI 535

Query: 485 IRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
            R F +  +   A +L   M G G   D+   T +       G  ++   IL +  +
Sbjct: 536 TRGFLRNNETLSAIQLLQEMLGRGFSADASTITLIVEMLSDDGLDQSVKQILHEFVQ 592



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 126/474 (26%), Positives = 222/474 (46%), Gaps = 16/474 (3%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           SVL  + K+   PD  +   + L+          + L +FD+M      P+      L++
Sbjct: 130 SVLAKIFKLGHQPD--TATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIH 187

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
            L K   +    ++ + MVQ     N+  YN +I    K   V++   +  EM  K +  
Sbjct: 188 GLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISP 247

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           ++ TYN++I   CK         + + M    I P++V + +L+   C+EG +  A  + 
Sbjct: 248 NVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVV 307

Query: 294 RDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
             +  +G  P+ VTYT L+DG+C  ++++EA ++ + M  KG  P V++Y++++   CK 
Sbjct: 308 DVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKI 367

Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
            RI  A  L  EM ++++ P+ VT NTLI+  C +G    A+ + + M+ +G + D  TY
Sbjct: 368 QRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTY 427

Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
           + L+   CK + +D A  +L  +  +  +P   SY+ ++DG C     EA   L     S
Sbjct: 428 RILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSS 487

Query: 472 RGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKA 531
           +GL  DV  Y  +I   C +  +  A +LF  M  +G   D   Y  +   + R  E  +
Sbjct: 488 KGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLS 547

Query: 532 CSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKE 585
              +L +M          + R FSA  +    I+++     +D+ +  K I  E
Sbjct: 548 AIQLLQEM----------LGRGFSADASTITLIVEMLSDDGLDQSV--KQILHE 589



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 89/307 (28%), Positives = 149/307 (48%), Gaps = 3/307 (0%)

Query: 251 HYEA-LAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYT 307
           HY   L++  +M+  GI  D+ T   +I+ FC   R+     +   I   G  P+  T+T
Sbjct: 89  HYSTVLSLSKQMDSLGIPSDVYTLAIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFT 148

Query: 308 TLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEK 367
           TLI G C    + EAL L + M  +G  P  VTY +++  LCK G  R A RLL  M +K
Sbjct: 149 TLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQK 208

Query: 368 KIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIA 427
              P+ +T NT+I+   K      A+ + + M+  G+  +  TY ++IHG CK  E    
Sbjct: 209 NCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHV 268

Query: 428 KELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRR 487
             L+  M+D+   P+   ++ LVD  C +        ++D  + RG+  DV  Y AL+  
Sbjct: 269 ATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDG 328

Query: 488 FCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMIT 547
            C + ++D A ++F+ M   G   + + Y++L   Y +         + ++M +R L+  
Sbjct: 329 HCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPN 388

Query: 548 LKIYRSF 554
           +  Y + 
Sbjct: 389 IVTYNTL 395



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 73/314 (23%), Positives = 142/314 (45%), Gaps = 2/314 (0%)

Query: 253 EALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR--DIKGATPNHVTYTTLI 310
           EAL+  +RM      P +V +  ++              L +  D  G   +  T   +I
Sbjct: 57  EALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAIVI 116

Query: 311 DGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIA 370
           + +C  N ++    +   +   G  P   T+ +++R LC EG+I +A  L ++M  +   
Sbjct: 117 NSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQ 176

Query: 371 PDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL 430
           P+ VT  TLI+  CK+G++ +A+++   M++     +  TY  +I    K ++++ A  +
Sbjct: 177 PNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNI 236

Query: 431 LFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCK 490
              M+  G SP+  +Y+ ++ G C  +  + +  L++E V   +  +V ++  L+   CK
Sbjct: 237 FSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCK 296

Query: 491 KEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKI 550
           +  V  A  + ++M   G+  D V YT+L   +    E      + D M R+     +  
Sbjct: 297 EGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVIS 356

Query: 551 YRSFSASYAKDNEI 564
           Y +    Y K   I
Sbjct: 357 YSTLINGYCKIQRI 370



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 48/246 (19%), Positives = 95/246 (38%), Gaps = 35/246 (14%)

Query: 354 IRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKA 413
           I +A    N M   +  P  V    ++ +   +   ++ + +  +M   G+  D +T   
Sbjct: 55  IDEALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAI 114

Query: 414 LIHGFCKAKEMD-----IAKELLFG------------------------------MLDAG 438
           +I+ FC    +D     +AK    G                              M+  G
Sbjct: 115 VINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEG 174

Query: 439 FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQ 498
           F P+  +Y  L+ G C   N  A ++LL   V +    +V  Y  +I    K  +V+ A 
Sbjct: 175 FQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEAL 234

Query: 499 RLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASY 558
            +F+ M   GI  +   Y S+ +   +  E K  + ++++M   ++M  + I+ +   + 
Sbjct: 235 NIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDAL 294

Query: 559 AKDNEI 564
            K+  +
Sbjct: 295 CKEGMV 300


>gi|15218284|ref|NP_172453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75276860|sp|O04504.1|PPR27_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09820
 gi|2160173|gb|AAB60736.1| Similar to N. tabacum salt-inducible protein (gb|U08285)
           [Arabidopsis thaliana]
 gi|332190378|gb|AEE28499.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 606

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 143/555 (25%), Positives = 265/555 (47%), Gaps = 30/555 (5%)

Query: 14  IKTISAIMLKGHWAKL------LNPN-IASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKW 66
           +  I+ ++ K HW+KL      +NPN +   L S+ +             P L   ++ W
Sbjct: 43  VAVIADLIEKQHWSKLGVHVTDINPNELFRQLISSELD------------PDLCLRYYSW 90

Query: 67  AESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDP 126
                 +   SL+  + ++H L   K +   ++ L+             +   + + D+ 
Sbjct: 91  LVKN-SDISVSLELTFKLLHSLANAKRYSKIRSFLDGFVRNGSDHQVHSIFHAISMCDNV 149

Query: 127 DGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWK 186
             NS +   LV+ YAN    + G + F +   +       +C  L+ +L K+  +  V  
Sbjct: 150 CVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEY 209

Query: 187 VYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYC 246
           VYK+M++  +  N+  +NV+I+A CK+  ++K   ++ +M+      ++ +YNTLI  YC
Sbjct: 210 VYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYC 269

Query: 247 K---KGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATP 301
           K    G  Y+A AV   M    +SP++ T+N LI GF ++  +  + ++F+++  +   P
Sbjct: 270 KLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKP 329

Query: 302 NHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLL 361
           N ++Y +LI+G C    + EA+ +R+ M + GV P ++TYN+++   CK   +++A  + 
Sbjct: 330 NVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMF 389

Query: 362 NEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKA 421
             +  +   P     N LI+AYCK+G       +K  M   G++ D  TY  LI G C+ 
Sbjct: 390 GSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRN 449

Query: 422 KEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVY 481
             ++ AK+ LF  L +   P   ++  L++GYC K        LL E    GL      Y
Sbjct: 450 GNIEAAKK-LFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTY 508

Query: 482 RALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVI-YTSLAYAYWRAGEPKACSDILDDMY 540
             +++ +CK+  +  A  +   M+    L  +V  Y  L   Y + G+ +  + +L++M 
Sbjct: 509 NIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEML 568

Query: 541 RRRLM---ITLKIYR 552
            + L+   IT +I +
Sbjct: 569 EKGLVPNRITYEIVK 583



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 108/359 (30%), Positives = 186/359 (51%), Gaps = 8/359 (2%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWK---VYKKMVQLGVVANIHLYNVLIH 208
           V + M+V+   P++ +   L++   K      ++K   V K+MV+  V  N+  +N+LI 
Sbjct: 245 VMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILID 304

Query: 209 ACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISP 268
              K  ++    K+  EM  +DV+ ++ +YN+LI   C  G   EA++++D+M   G+ P
Sbjct: 305 GFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQP 364

Query: 269 DIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLR 326
           +++TYN+LI+GFC+   ++EA  +F  +K  GA P    Y  LID YC+   +++   L+
Sbjct: 365 NLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALK 424

Query: 327 EVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKI 386
           E M  +G+ P V TYN ++  LC+ G I  A +L +++  K + PD VT + L+  YC+ 
Sbjct: 425 EEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRK 483

Query: 387 GDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGM-LDAGFSPSYCS 445
           G++  A  +   M + GL     TY  ++ G+CK   +  A  +   M  +     +  S
Sbjct: 484 GESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVAS 543

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKV-DYAQRLFNL 503
           Y+ L+ GY  K   E    LL+E + +GL  +   Y  +      +  V D    LFN+
Sbjct: 544 YNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQGFVPDIEGHLFNV 602



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 91/313 (29%), Positives = 159/313 (50%), Gaps = 6/313 (1%)

Query: 257 VQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYC 314
           V   M R  I P++ T+N +I+  C+ G+M +AR +  D+K  G +PN V+Y TLIDGYC
Sbjct: 210 VYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYC 269

Query: 315 RAND---LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAP 371
           +      + +A  + + M    V P + T+N ++    K+  +  + ++  EM ++ + P
Sbjct: 270 KLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKP 329

Query: 372 DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
           + ++ N+LIN  C  G  + A+ ++++M+ AG+  +  TY ALI+GFCK   +  A ++ 
Sbjct: 330 NVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMF 389

Query: 432 FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
             +   G  P+   Y+ L+D YC     +    L +E    G+  DV  Y  LI   C+ 
Sbjct: 390 GSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRN 449

Query: 492 EKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIY 551
             ++ A++LF+ +   G L D V +  L   Y R GE +  + +L +M +  L      Y
Sbjct: 450 GNIEAAKKLFDQLTSKG-LPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTY 508

Query: 552 RSFSASYAKDNEI 564
                 Y K+  +
Sbjct: 509 NIVMKGYCKEGNL 521



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/272 (25%), Positives = 122/272 (44%), Gaps = 41/272 (15%)

Query: 125 DPDGNSHVLSW--LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTD 182
           D D   +V+S+  L+    N     + + + D+M    + P+L     L+N   K+ +  
Sbjct: 324 DQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLK 383

Query: 183 MVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLI 242
               ++  +   G V    +YN+LI A CK   +D    L  EME + +  D+ TYN LI
Sbjct: 384 EALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLI 443

Query: 243 ALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GAT 300
           A  C+ G    A  + D++  +G+ PD+VT++ L+ G+CR+G  R+A  L +++   G  
Sbjct: 444 AGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLK 502

Query: 301 PNHVTYTTLIDGYCRANDLEEALRLREVMA------------------------------ 330
           P H+TY  ++ GYC+  +L+ A  +R  M                               
Sbjct: 503 PRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANM 562

Query: 331 ------AKGVYPGVVTYNSILRKLCKEGRIRD 356
                  KG+ P  +TY  +  ++  +G + D
Sbjct: 563 LLNEMLEKGLVPNRITYEIVKEEMVDQGFVPD 594



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 72/300 (24%), Positives = 125/300 (41%), Gaps = 6/300 (2%)

Query: 275 SLIHGFCREGRMREARRLFRDIK---GATPNHVTYTTLIDGYCRANDLEEALRLREVMAA 331
           S + GF R G   +   +F  I        N +    L+  Y   +  E      +    
Sbjct: 122 SFLDGFVRNGSDHQVHSIFHAISMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGY 181

Query: 332 KGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTAS 391
            G     ++   ++  L KE R  D   +  EM  +KI P+  T N +INA CK G    
Sbjct: 182 YGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNK 241

Query: 392 AMKVKNRMLEAGLMLDQFTYKALIHGFCK---AKEMDIAKELLFGMLDAGFSPSYCSYSW 448
           A  V   M   G   +  +Y  LI G+CK     +M  A  +L  M++   SP+  +++ 
Sbjct: 242 ARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNI 301

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG 508
           L+DG+   +N    +K+  E + + +  +V  Y +LI   C   K+  A  + + M   G
Sbjct: 302 LIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAG 361

Query: 509 ILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLF 568
           +  + + Y +L   + +    K   D+   +  +  + T ++Y     +Y K  +I D F
Sbjct: 362 VQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGF 421


>gi|358346502|ref|XP_003637306.1| Pentatricopeptide repeat-containing protein, partial [Medicago
           truncatula]
 gi|355503241|gb|AES84444.1| Pentatricopeptide repeat-containing protein, partial [Medicago
           truncatula]
          Length = 603

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 129/507 (25%), Positives = 247/507 (48%), Gaps = 44/507 (8%)

Query: 59  LSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKI--ALRDFLSTPSVL 116
           ++ +FF WA    P ++H ++ +      L  N++ + A  ++  +  +  +       +
Sbjct: 97  VTLSFFHWA-IGYPKFRHFMRLYIVCAMSLIGNRNSEKACEVMRCMVESFSEVGRLKEAV 155

Query: 117 NALVKIHDDP-DGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLL--- 172
             ++++H+     N+  L+W++   + + + +    +F++M V  + P   +  V++   
Sbjct: 156 EMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRGVQPDSISYRVMVVMY 215

Query: 173 ----NSLAKDR-----------------------------LTDMVWKVYKKMVQLGVVAN 199
               N L  D+                              T  +W  ++++V +G+  N
Sbjct: 216 CKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRALW-YFRRLVDMGLEPN 274

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
           +  +  +I   CK   + +  ++L EM  K  + +++T+ +LI   CKKG   +A  +  
Sbjct: 275 LINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLFL 334

Query: 260 RMER-EGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRA 316
           ++ R E   P+++TY ++I G+CRE ++  A  L   +K  G  PN  TYTTLIDG+C+A
Sbjct: 335 KLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKA 394

Query: 317 NDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTC 376
            + E A  L  +M+++G  P + TYN+I+  LCK GR+++A ++L +  +  + PD  T 
Sbjct: 395 GNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTY 454

Query: 377 NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD 436
           N L++ +CK  +   A+ + N+ML+ G+  D  +Y  LI  FC+   M  ++      + 
Sbjct: 455 NILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVR 514

Query: 437 AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDY 496
            G  P+  +Y+ ++ GYC + N    +K        G   D   Y A+I   CK+ K D 
Sbjct: 515 IGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKRDE 574

Query: 497 AQRLFNLMQGNGILGDSVIYTSLAYAY 523
           A+ L++ M   G++   V   +LAY Y
Sbjct: 575 ARSLYDSMIEKGLVPCEVTRITLAYEY 601



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 118/389 (30%), Positives = 183/389 (47%), Gaps = 4/389 (1%)

Query: 179 RLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTY 238
           RL + V  V + M   G+V N    N +I    +   V+  E L  EM  + V+ D  +Y
Sbjct: 150 RLKEAVEMVIE-MHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRGVQPDSISY 208

Query: 239 NTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI-- 296
             ++ +YCK G   EA      M   G   D  T+  +I  F  +G    A   FR +  
Sbjct: 209 RVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRALWYFRRLVD 268

Query: 297 KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRD 356
            G  PN + +T +I+G C+   +++A  + E M  KG  P V T+ S++  LCK+G    
Sbjct: 269 MGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEK 328

Query: 357 ANRL-LNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALI 415
           A RL L  +  +   P+ +T   +I+ YC+      A  + +RM E GL+ +  TY  LI
Sbjct: 329 AFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLI 388

Query: 416 HGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLC 475
            G CKA   + A +L+  M   GFSP+ C+Y+ +V+G C +   +   K+L++    GL 
Sbjct: 389 DGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLK 448

Query: 476 VDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDI 535
            D   Y  L+   CK+E +  A  LFN M   GI  D   YT+L   + R    K     
Sbjct: 449 PDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMF 508

Query: 536 LDDMYRRRLMITLKIYRSFSASYAKDNEI 564
            ++  R  ++ T K Y S    Y ++  +
Sbjct: 509 FEEAVRIGIIPTNKTYTSMICGYCREGNL 537



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 88/311 (28%), Positives = 160/311 (51%), Gaps = 3/311 (0%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQL-GVVANIHLYNV 205
           +   ++ ++M      P+++  T L++ L K   T+  ++++ K+V+      N+  Y  
Sbjct: 292 KQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTA 351

Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
           +I   C+   +++ E LL  M+ + +  +  TY TLI  +CK G    A  + + M  EG
Sbjct: 352 MISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEG 411

Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEAL 323
            SP++ TYN++++G C+ GR++EA ++  D    G  P+  TY  L+  +C+  ++ +AL
Sbjct: 412 FSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQAL 471

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
            L   M   G+ P + +Y +++   C+E R++++     E     I P N T  ++I  Y
Sbjct: 472 ALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGY 531

Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY 443
           C+ G+   AMK  +R+ + G   D  TY A+I G CK  + D A+ L   M++ G  P  
Sbjct: 532 CREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKRDEARSLYDSMIEKGLVPCE 591

Query: 444 CSYSWLVDGYC 454
            +   L   YC
Sbjct: 592 VTRITLAYEYC 602



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 76/296 (25%), Positives = 143/296 (48%), Gaps = 3/296 (1%)

Query: 276 LIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKG 333
           ++  F   GR++EA  +  ++  +G  PN  T   +I        +E A  L E M  +G
Sbjct: 141 MVESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRG 200

Query: 334 VYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAM 393
           V P  ++Y  ++   CK G I +A++ L+ M E+    DN T   +I+ +   G T  A+
Sbjct: 201 VQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRAL 260

Query: 394 KVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGY 453
               R+++ GL  +   +  +I G CK   +  A E+L  M+  G+ P+  +++ L+DG 
Sbjct: 261 WYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGL 320

Query: 454 CNKNNEEALLKLLDEFV-SRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGD 512
           C K   E   +L  + V S     +V  Y A+I  +C+++K++ A+ L + M+  G++ +
Sbjct: 321 CKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPN 380

Query: 513 SVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLF 568
           +  YT+L   + +AG  +   D+++ M        L  Y +      K   + + +
Sbjct: 381 TNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAY 436



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/136 (21%), Positives = 62/136 (45%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           +  L +F++M    + P +H+ T L+    ++         +++ V++G++     Y  +
Sbjct: 468 RQALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSM 527

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           I   C+  ++    K    +       D  TY  +I+  CK+    EA ++ D M  +G+
Sbjct: 528 ICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKRDEARSLYDSMIEKGL 587

Query: 267 SPDIVTYNSLIHGFCR 282
            P  VT  +L + +C+
Sbjct: 588 VPCEVTRITLAYEYCK 603


>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
 gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
          Length = 734

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 147/496 (29%), Positives = 216/496 (43%), Gaps = 83/496 (16%)

Query: 156 MRVHNLMPHLHAC-------TVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIH 208
           +R  +L PH  AC       TVL+ +L  DRL D    + + M   GV A++  Y  LI 
Sbjct: 100 LRAMSLEPH-PACRPNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIR 158

Query: 209 ACCKSSDVDK-----------------------------------VEKLLCEMEFKDVRA 233
             C +++VDK                                   V K+  EM  K +  
Sbjct: 159 GLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEP 218

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           D+  Y  LI   CK G   +A  V D M R G+ P++VTYN LI+  C+EG ++EA  + 
Sbjct: 219 DVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVL 278

Query: 294 RDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKG---VYPGVVTYNSILRKL 348
           + +  KG  P+ VTY TLI G     +++EA+ L E M  +G   V P VVT+NS+++ L
Sbjct: 279 KKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMV-RGKNIVKPNVVTFNSVIQGL 337

Query: 349 CKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ 408
           C  GR+R A ++   M E     + VT N LI    ++     AM++ + M   GL  D 
Sbjct: 338 CDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDS 397

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS-------------------------- 442
           FTY  LI GFCK  ++D A++LL  M D G  P                           
Sbjct: 398 FTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNE 457

Query: 443 --------YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKV 494
                     +YS ++ G C   + +   +LL   V  GL  D   Y  +I  F K   +
Sbjct: 458 MDNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDM 517

Query: 495 DYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSF 554
           + A  +   M  +G L D  ++ SL   Y   GE     +++ +M  + + +  KI  + 
Sbjct: 518 EAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALDSKIISTL 577

Query: 555 SASYAKDNEILDLFWS 570
           S S    NE   L  S
Sbjct: 578 STSLVASNEGKALLQS 593



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 94/314 (29%), Positives = 158/314 (50%), Gaps = 9/314 (2%)

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMERE---GISPDIVTYNSLIHGFCREGRMREAR 290
           D  +YNT++   C++G H  A A+   M  E      P+ V+Y  L+   C +    +A 
Sbjct: 76  DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAV 135

Query: 291 RLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
            L R ++  G   + VTY TLI G C A ++++A+ L   M   G+ P VV Y+S+L+  
Sbjct: 136 GLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGY 195

Query: 349 CKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ 408
           CK GR  D  ++  EM+EK I PD V    LI++ CK+G    A  V + M+  GL  + 
Sbjct: 196 CKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNV 255

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
            TY  LI+  CK   +  A  +L  M + G +P   +Y+ L+ G  +    +  + LL+E
Sbjct: 256 VTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEE 315

Query: 469 FVSRGLCV---DVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWR 525
            V RG  +   +V  + ++I+  C   ++  A ++  +M+  G + + V Y  L     R
Sbjct: 316 MV-RGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLR 374

Query: 526 AGEPKACSDILDDM 539
             + +   +++D+M
Sbjct: 375 VHKVRKAMELMDEM 388



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/363 (27%), Positives = 163/363 (44%), Gaps = 41/363 (11%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           V D M    L P++    VL+N + K+        V KKM + GV  ++  YN LI    
Sbjct: 242 VMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLS 301

Query: 212 KSSDVDKVEKLLCEMEFKD--VRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
              ++D+   LL EM      V+ ++ T+N++I   C  G   +A  V+  ME  G   +
Sbjct: 302 DVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVN 361

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLRE 327
           +VTYN LI G  R  ++R+A  L  ++   G  P+  TY+ LI G+C+   ++ A  L  
Sbjct: 362 LVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLS 421

Query: 328 VMAAKGVYP----------------------------------GVVTYNSILRKLCKEGR 353
            M  +G+ P                                   VV Y++++   CK G 
Sbjct: 422 TMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDNNFPLDVVAYSTMIHGACKAGD 481

Query: 354 IRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKA 413
           ++ A  LL  + ++ + PD VT + +IN + K GD  +A  V  +M  +G + D   + +
Sbjct: 482 LKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDS 541

Query: 414 LIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEF---V 470
           LI G+    E++   EL+  M+    +      S L       N  +ALL+ L +F   +
Sbjct: 542 LIQGYSTKGEINKVLELIREMITKNIALDSKIISTLSTSLVASNEGKALLQSLPDFSAEI 601

Query: 471 SRG 473
           S+G
Sbjct: 602 SKG 604



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/268 (28%), Positives = 119/268 (44%), Gaps = 8/268 (2%)

Query: 323 LRLREVMAAKGVYPGV---VTYNSILRKLCKEGRIRDANRLLNEMN-EKKIA--PDNVTC 376
           L L E  +     P V   V+YN++L  LC+ G    A  LL  M+ E   A  P+ V+ 
Sbjct: 59  LPLGEATSLLDALPSVRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSY 118

Query: 377 NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD 436
             L+ A C       A+ +   M  AG+  D  TY  LI G C A E+D A EL+  M +
Sbjct: 119 TVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCE 178

Query: 437 AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDY 496
           +G  P+   YS L+ GYC     E + K+  E   +G+  DV +Y  LI   CK  K   
Sbjct: 179 SGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKK 238

Query: 497 AQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSA 556
           A  + ++M   G+  + V Y  L     + G  K    +L  M  + +   +  Y +   
Sbjct: 239 AHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIK 298

Query: 557 SYAKDNEILDLFWSHVVDRGLMSKHIFK 584
             +   E+ +  W  +++  +  K+I K
Sbjct: 299 GLSDVLEMDEAMW--LLEEMVRGKNIVK 324


>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 774

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 143/451 (31%), Positives = 211/451 (46%), Gaps = 51/451 (11%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           NS V   L+   +      + L++ ++M +   +P +     ++  L +        K+ 
Sbjct: 242 NSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRIHEGAKLV 301

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFK-DVRADLFTYNTLIALYCK 247
            +M+  G   N   Y VL++  C+   VD+ + LL ++    DV      +  LI  Y K
Sbjct: 302 DRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVPTPNDVH-----FTILINGYVK 356

Query: 248 KGMHYEALA-VQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHV 304
            G   EA A + D+M + G  PD+ T+N+LIHG C++G M  A  +  D+   G TPN +
Sbjct: 357 SGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLI 416

Query: 305 TYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM 364
           TYTTL+DG+C+ N LEEA  +   M+AKG    ++ YN +LR LCK G++  A  +L EM
Sbjct: 417 TYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEM 476

Query: 365 NEKKIAPDNVTCNTLINAYCKI-----------------------------------GDT 389
           ++K   PD  T NTLI   CK+                                   G  
Sbjct: 477 SDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAI 536

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
             A+K+ N ML  G  LD+ TY  LI  FCK    + A  L   M+     PS  S + L
Sbjct: 537 QEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLL 596

Query: 450 VDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGI 509
           ++G C        L+LL + + RGL  DV  Y +LI   CK   +  A  LFN +Q  GI
Sbjct: 597 INGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGI 656

Query: 510 LGDSVIYTSLAYAYWRAGEPKACSDILDDMY 540
             D++ Y +L   + RAG       + DD Y
Sbjct: 657 QPDAITYNTLICWHCRAG-------MFDDAY 680



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 143/510 (28%), Positives = 234/510 (45%), Gaps = 27/510 (5%)

Query: 58  SLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNML-----EKIALRDFL-- 110
           S S A F+WA S    Y H+   +  +I  L   K FK    +L     E IA R+ L  
Sbjct: 83  STSMAIFQWAGSQ-KGYCHTFDVYHVLIDKLGAAKEFKVIDKLLLQIKEEGIAFRESLFI 141

Query: 111 --------------STPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQM 156
                         +T  +L+       +P   S+ +   ++  AN         VF +M
Sbjct: 142 CIMKYYGRANLPGQATRMLLDMKGVYCCEPTFKSYNVVLDILVSANCPSV--AANVFYEM 199

Query: 157 RVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDV 216
               ++P ++   V++ +L      D    + + M + G V N  +Y  LIHA  K   V
Sbjct: 200 LSKGVIPTVYTFGVVMKALCMVNEVDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRV 259

Query: 217 DKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSL 276
           ++  KLL EM       D+ T+N +I   C+    +E   + DRM   G +P+ +TY  L
Sbjct: 260 NEALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVL 319

Query: 277 IHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEA-LRLREVMAAKGVY 335
           ++G CR G++ EA+ L   +   TPN V +T LI+GY ++  L+EA   L + M   G  
Sbjct: 320 MNGLCRVGKVDEAQVLLNKV--PTPNDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCR 377

Query: 336 PGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKV 395
           P V T+N+++  LCK+G +  A  ++N+M+     P+ +T  TL++ +CK      A  V
Sbjct: 378 PDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYV 437

Query: 396 KNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCN 455
            N M   G  L+   Y  L+   CK  ++  A ++L  M D G  P   +++ L+ G C 
Sbjct: 438 LNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCK 497

Query: 456 KNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVI 515
            + +E  L L  + +  G+  +   Y  LI  F +   +  A +L N M   G   D + 
Sbjct: 498 VDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEIT 557

Query: 516 YTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
           Y  L  A+ + G  +    + D+M R+ L+
Sbjct: 558 YNGLIKAFCKLGATEKALGLFDEMVRKDLV 587



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 108/332 (32%), Positives = 170/332 (51%), Gaps = 2/332 (0%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           + + + M  +   P+L   T LL+   K    +    V  +M   G   NI  YNVL+ A
Sbjct: 400 VDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRA 459

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
            CK+  V K   +L EM  K  + D+FT+NTLI   CK     +ALA+   M  +G+  +
Sbjct: 460 LCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIAN 519

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLRE 327
            VTYN+LIH F R G ++EA +L  D+  +G   + +TY  LI  +C+    E+AL L +
Sbjct: 520 TVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFD 579

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
            M  K + P  ++ N ++  LC+ G++ +A  LL +M  + +APD VT N+LIN  CK+G
Sbjct: 580 EMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMG 639

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
           +   A  + N++   G+  D  TY  LI   C+A   D A  LL   ++  F P+  ++ 
Sbjct: 640 NIREAFNLFNKLQAEGIQPDAITYNTLICWHCRAGMFDDAYLLLLRGVENAFIPNDVTWY 699

Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
            LV  +  +  +E  +      V   +C+ V 
Sbjct: 700 ILVSNFIKEIGKENGISFGTAKVIPSICIQVQ 731



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 106/343 (30%), Positives = 168/343 (48%), Gaps = 4/343 (1%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           ++D+M  +   P +     L++ L K  L      +   M   G   N+  Y  L+   C
Sbjct: 367 LYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFC 426

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           K + +++   +L EM  K    ++  YN L+   CK G   +AL +   M  +G  PDI 
Sbjct: 427 KKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIF 486

Query: 272 TYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           T+N+LI G C+  R  +A  L+RD  + G   N VTY TLI  + R   ++EAL+L   M
Sbjct: 487 TFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDM 546

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
             +G     +TYN +++  CK G    A  L +EM  K + P N++CN LIN  C++G  
Sbjct: 547 LFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKV 606

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
            +A+++   M+  GL  D  TY +LI+G CK   +  A  L   +   G  P   +Y+ L
Sbjct: 607 CNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITYNTL 666

Query: 450 VDGYCNKNN-EEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
           +  +C     ++A L LL    +  +  DV+ Y  L+  F K+
Sbjct: 667 ICWHCRAGMFDDAYLLLLRGVENAFIPNDVTWY-ILVSNFIKE 708



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 82/355 (23%), Positives = 150/355 (42%), Gaps = 39/355 (10%)

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGA---TPNHVTYTTLIDGYCRA 316
           +++ EGI+     +  ++  + R     +A R+  D+KG     P   +Y  ++D    A
Sbjct: 127 QIKEEGIAFRESLFICIMKYYGRANLPGQATRMLLDMKGVYCCEPTFKSYNVVLDILVSA 186

Query: 317 NDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTC 376
           N    A  +   M +KGV P V T+  +++ LC    + +A  LL +M +    P++V  
Sbjct: 187 NCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNEVDNACSLLRDMTKHGCVPNSVVY 246

Query: 377 NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD 436
            TLI+A  K      A+K+   M   G + D  T+  +I+G C+   +    +L+  ML 
Sbjct: 247 QTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLF 306

Query: 437 AGFSPSYCSYSWLVDGYCNKNN--------------------------------EEALLK 464
            GF+P+  +Y  L++G C                                    +EA   
Sbjct: 307 RGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVPTPNDVHFTILINGYVKSGRLDEANAF 366

Query: 465 LLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYW 524
           L D+ +  G   DV  +  LI   CKK  +  A  + N M  NG   + + YT+L   + 
Sbjct: 367 LYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFC 426

Query: 525 RAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI---LDLFWSHVVDRG 576
           +  + +    +L++M  +   + +  Y     +  K+ ++   LD+    + D+G
Sbjct: 427 KKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDML-GEMSDKG 480



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 47/204 (23%), Positives = 91/204 (44%), Gaps = 17/204 (8%)

Query: 80  SHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIF 139
           ++ T+IH   +    + A  ++  +  R         N L+K                  
Sbjct: 522 TYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKA----------------- 564

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
           +  L  T+  L +FD+M   +L+P   +C +L+N L +        ++ + M+  G+  +
Sbjct: 565 FCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPD 624

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
           +  YN LI+  CK  ++ +   L  +++ + ++ D  TYNTLI  +C+ GM  +A  +  
Sbjct: 625 VVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITYNTLICWHCRAGMFDDAYLLLL 684

Query: 260 RMEREGISPDIVTYNSLIHGFCRE 283
           R       P+ VT+  L+  F +E
Sbjct: 685 RGVENAFIPNDVTWYILVSNFIKE 708


>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 113/395 (28%), Positives = 208/395 (52%), Gaps = 2/395 (0%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
            + + + D+M      P L    V++N L K   TD+ + +  KM Q  +   + +Y  +
Sbjct: 203 SEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTI 262

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           I   CK+  +D    L  EME K +R ++ TY++LI+  C  G   +A  +   M    I
Sbjct: 263 IDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKI 322

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
           +PD+ T+++LI  F +EG++ EA +L+ ++  +   P+ VTY++LI+G+C  + L+EA +
Sbjct: 323 NPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQ 382

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           + E M +K  +P VV+Y+++++  CK  R+ +   L  EM+++ +  + VT  TLI    
Sbjct: 383 MFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLF 442

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           + GD   A ++   M+  G+  +  TY  L+ G CK  +++ A  +   +  +   P+  
Sbjct: 443 QAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIY 502

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
           +Y+ +++G C     E    L      +G+  DV  Y  +I  FC+K   + A  LF  M
Sbjct: 503 TYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEM 562

Query: 505 QGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
           + +G L +S  Y +L  A  R G+ +A ++++ +M
Sbjct: 563 KEDGTLPNSGCYNTLIRARLRDGDREASAELIKEM 597



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 137/476 (28%), Positives = 235/476 (49%), Gaps = 11/476 (2%)

Query: 95  KSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFD 154
           K ++N L ++ L D ++   +   +VK    P     ++ +  +  A  KM +  + +  
Sbjct: 51  KLSRNGLSELKLDDAVA---LFGEMVKSRPFPS----IIEFSKLLSAIAKMNKFDVVISL 103

Query: 155 QMRVHNL-MPHLH-ACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCK 212
             ++ NL MPH H   ++L+N   +     +   V  KM++LG   NI   + L++  C 
Sbjct: 104 GEQMQNLGMPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCH 163

Query: 213 SSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVT 272
           S  + +   L+ +M     + +  T+NTLI          EA+A+ DRM  +G  PD+VT
Sbjct: 164 SKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVT 223

Query: 273 YNSLIHGFCREGRMREARRLFRDIKGA--TPNHVTYTTLIDGYCRANDLEEALRLREVMA 330
           Y  +++G C+ G    A  L   ++     P  + YTT+IDG C+   +++AL L + M 
Sbjct: 224 YGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEME 283

Query: 331 AKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTA 390
            KG+ P VVTY+S++  LC  GR  DA+RLL++M E+KI PD  T + LI+A+ K G   
Sbjct: 284 TKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLV 343

Query: 391 SAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLV 450
            A K+ + M++  +     TY +LI+GFC    +D AK++   M+     P   SYS L+
Sbjct: 344 EAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLI 403

Query: 451 DGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGIL 510
            G+C     +  ++L  E   RGL  +   Y  LI+   +    D AQ +F  M  +G+ 
Sbjct: 404 KGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVP 463

Query: 511 GDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
            + + Y +L     + G+ +    + + + R ++  T+  Y        K  ++ D
Sbjct: 464 PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVED 519



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 136/502 (27%), Positives = 234/502 (46%), Gaps = 37/502 (7%)

Query: 19  AIMLKGHWAKL-LNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHS 77
           A+ + G   KL   PNI + L+S      LLN Y  CH   +S A     +  V  Y+ +
Sbjct: 135 ALAVLGKMMKLGYEPNIVT-LSS------LLNGY--CHSKRISEAVALVDQMFVTGYQPN 185

Query: 78  LQSHWTMIHILTKNKHFKSAQNMLEKIALR----DFLSTPSVLNALVKIHDDPDGNSHVL 133
             +  T+IH L  +     A  +++++  +    D ++   V+N L K  D         
Sbjct: 186 TVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGD--------- 236

Query: 134 SWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQ 193
                       T     + ++M    L P +   T +++ L K++  D    ++K+M  
Sbjct: 237 ------------TDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMET 284

Query: 194 LGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYE 253
            G+  N+  Y+ LI   C         +LL +M  + +  D+FT++ LI  + K+G   E
Sbjct: 285 KGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVE 344

Query: 254 ALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLID 311
           A  + D M +  I P IVTY+SLI+GFC   R+ EA+++F  +  K   P+ V+Y+TLI 
Sbjct: 345 AEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIK 404

Query: 312 GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAP 371
           G+C+A  ++E + L   M+ +G+    VTY ++++ L + G    A  +  EM    + P
Sbjct: 405 GFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPP 464

Query: 372 DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
           + +T NTL++  CK G    AM V   +  + +    +TY  +I G CKA +++   +L 
Sbjct: 465 NIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLF 524

Query: 432 FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
             +   G  P   +Y+ ++ G+C K ++E    L  E    G   +   Y  LIR   + 
Sbjct: 525 CNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRD 584

Query: 492 EKVDYAQRLFNLMQGNGILGDS 513
              + +  L   M+  G  GD+
Sbjct: 585 GDREASAELIKEMRSCGFAGDA 606



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 92/352 (26%), Positives = 166/352 (47%), Gaps = 24/352 (6%)

Query: 81  HWTMIHILTKNKHFKSAQNM---LEKIALRDFLSTPS-----------------VLNALV 120
           + T+I  L KNKH   A N+   +E   +R  + T S                 +L+ ++
Sbjct: 259 YTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMI 318

Query: 121 KIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRL 180
           +   +PD      S L+  +       +  +++D+M   ++ P +   + L+N       
Sbjct: 319 ERKINPD--VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDR 376

Query: 181 TDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNT 240
            D   ++++ MV      ++  Y+ LI   CK+  VD+  +L  EM  + +  +  TY T
Sbjct: 377 LDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTT 436

Query: 241 LIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGA- 299
           LI    + G    A  +   M  +G+ P+I+TYN+L+ G C+ G++ +A  +F  ++ + 
Sbjct: 437 LIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 496

Query: 300 -TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDAN 358
             P   TY  +I+G C+A  +E+   L   ++ KGV P VV YN+++   C++G   +A+
Sbjct: 497 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEAD 556

Query: 359 RLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
            L  EM E    P++   NTLI A  + GD  ++ ++   M   G   D  T
Sbjct: 557 ALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST 608



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 70/233 (30%), Positives = 116/233 (49%), Gaps = 2/233 (0%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           Q+F+ M   +  P + + + L+    K +  D   +++++M Q G+V N   Y  LI   
Sbjct: 382 QMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGL 441

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
            ++ D D  +++  EM    V  ++ TYNTL+   CK G   +A+ V + ++R  + P I
Sbjct: 442 FQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTI 501

Query: 271 VTYNSLIHGFCREGRMREARRLF--RDIKGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
            TYN +I G C+ G++ +   LF    +KG  P+ V Y T+I G+CR    EEA  L + 
Sbjct: 502 YTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKE 561

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
           M   G  P    YN+++R   ++G    +  L+ EM     A D  T   + N
Sbjct: 562 MKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTN 614


>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
 gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats [Arabidopsis thaliana]
 gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 632

 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 113/395 (28%), Positives = 209/395 (52%), Gaps = 2/395 (0%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
            + + + DQM      P L     ++N L K    D+   + KKM +  + A++ +YN +
Sbjct: 205 SEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTI 264

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           I   CK   +D    L  EM+ K +R D+FTY++LI+  C  G   +A  +   M    I
Sbjct: 265 IDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKI 324

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
           +P++VT+++LI  F +EG++ EA +L+ ++  +   P+  TY++LI+G+C  + L+EA  
Sbjct: 325 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 384

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           + E+M +K  +P VVTY+++++  CK  R+ +   L  EM+++ +  + VT  TLI+ + 
Sbjct: 385 MFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFF 444

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           +  D  +A  V  +M+  G+  +  TY  L+ G CK  ++  A  +   +  +   P   
Sbjct: 445 QARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIY 504

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
           +Y+ +++G C     E   +L      +G+  +V  Y  +I  FC+K   + A  L   M
Sbjct: 505 TYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKM 564

Query: 505 QGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
           + +G L +S  Y +L  A  R G+ +A ++++ +M
Sbjct: 565 KEDGPLPNSGTYNTLIRARLRDGDREASAELIKEM 599



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 129/429 (30%), Positives = 212/429 (49%), Gaps = 6/429 (1%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           +VL  ++K+  +PD     LS L+  Y + K   D + + DQM      P     T L++
Sbjct: 139 AVLAKMMKLGYEPD--IVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIH 196

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
            L           +  +MVQ G   ++  Y  +++  CK  D+D    LL +ME   + A
Sbjct: 197 GLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEA 256

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           D+  YNT+I   CK     +AL +   M+ +GI PD+ TY+SLI   C  GR  +A RL 
Sbjct: 257 DVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLL 316

Query: 294 RDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
            D+  +   PN VT++ LID + +   L EA +L + M  + + P + TY+S++   C  
Sbjct: 317 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 376

Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
            R+ +A  +   M  K   P+ VT +TLI  +CK       M++   M + GL+ +  TY
Sbjct: 377 DRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTY 436

Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
             LIHGF +A++ D A+ +   M+  G  P+  +Y+ L+DG C KN + A   ++ E++ 
Sbjct: 437 TTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLC-KNGKLAKAMVVFEYLQ 495

Query: 472 RG-LCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPK 530
           R  +  D+  Y  +I   CK  KV+    LF  +   G+  + + Y ++   + R G  +
Sbjct: 496 RSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKE 555

Query: 531 ACSDILDDM 539
               +L  M
Sbjct: 556 EADSLLKKM 564



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 117/377 (31%), Positives = 193/377 (51%), Gaps = 2/377 (0%)

Query: 154 DQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKS 213
           +QM+   +   L+  ++ +N   +     +   V  KM++LG   +I   + L++  C S
Sbjct: 107 EQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHS 166

Query: 214 SDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTY 273
             +     L+ +M     + D FT+ TLI          EA+A+ D+M + G  PD+VTY
Sbjct: 167 KRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTY 226

Query: 274 NSLIHGFCREGRMREARRLFRDIKGA--TPNHVTYTTLIDGYCRANDLEEALRLREVMAA 331
            ++++G C+ G +  A  L + ++      + V Y T+IDG C+   +++AL L   M  
Sbjct: 227 GTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDN 286

Query: 332 KGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTAS 391
           KG+ P V TY+S++  LC  GR  DA+RLL++M E+KI P+ VT + LI+A+ K G    
Sbjct: 287 KGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVE 346

Query: 392 AMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVD 451
           A K+ + M++  +  D FTY +LI+GFC    +D AK +   M+     P+  +YS L+ 
Sbjct: 347 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIK 406

Query: 452 GYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILG 511
           G+C     E  ++L  E   RGL  +   Y  LI  F +    D AQ +F  M   G+  
Sbjct: 407 GFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHP 466

Query: 512 DSVIYTSLAYAYWRAGE 528
           + + Y  L     + G+
Sbjct: 467 NILTYNILLDGLCKNGK 483



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 110/381 (28%), Positives = 198/381 (51%), Gaps = 2/381 (0%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D + +F  M      P +     LL+++AK    ++V  + ++M  LG+  +++ Y++ I
Sbjct: 66  DAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFI 125

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           +  C+ S +     +L +M       D+ T ++L+  YC      +A+A+ D+M   G  
Sbjct: 126 NCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYK 185

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
           PD  T+ +LIHG     +  EA  L   +  +G  P+ VTY T+++G C+  D++ AL L
Sbjct: 186 PDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSL 245

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
            + M    +   VV YN+I+  LCK   + DA  L  EM+ K I PD  T ++LI+  C 
Sbjct: 246 LKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCN 305

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            G  + A ++ + M+E  +  +  T+ ALI  F K  ++  A++L   M+     P   +
Sbjct: 306 YGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 365

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           YS L++G+C  +  +    + +  +S+    +V  Y  LI+ FCK ++V+    LF  M 
Sbjct: 366 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMS 425

Query: 506 GNGILGDSVIYTSLAYAYWRA 526
             G++G++V YT+L + +++A
Sbjct: 426 QRGLVGNTVTYTTLIHGFFQA 446



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 119/410 (29%), Positives = 203/410 (49%), Gaps = 9/410 (2%)

Query: 177 KDRLTDMV-----WKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDV 231
           ++RL+D++       ++  MV+     +I  +N L+ A  K +  + V  L  +M+   +
Sbjct: 55  RNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGI 114

Query: 232 RADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARR 291
             DL+TY+  I  +C++     ALAV  +M + G  PDIVT +SL++G+C   R+ +A  
Sbjct: 115 SHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVA 174

Query: 292 LFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLC 349
           L   +   G  P+  T+TTLI G    N   EA+ L + M  +G  P +VTY +++  LC
Sbjct: 175 LVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLC 234

Query: 350 KEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQF 409
           K G I  A  LL +M + KI  D V  NT+I+  CK      A+ +   M   G+  D F
Sbjct: 235 KRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVF 294

Query: 410 TYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEF 469
           TY +LI   C       A  LL  M++   +P+  ++S L+D +  +       KL DE 
Sbjct: 295 TYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 354

Query: 470 VSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEP 529
           + R +  D+  Y +LI  FC  +++D A+ +F LM       + V Y++L   + +A   
Sbjct: 355 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRV 414

Query: 530 KACSDILDDMYRRRLMITLKIYRSFSASY--AKDNEILDLFWSHVVDRGL 577
           +   ++  +M +R L+     Y +    +  A+D +   + +  +V  G+
Sbjct: 415 EEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGV 464



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 75/267 (28%), Positives = 132/267 (49%), Gaps = 4/267 (1%)

Query: 117 NALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLA 176
           + ++K   DPD  ++  S L+  +       +   +F+ M   +  P++   + L+    
Sbjct: 352 DEMIKRSIDPDIFTY--SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFC 409

Query: 177 KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLF 236
           K +  +   +++++M Q G+V N   Y  LIH   ++ D D  + +  +M    V  ++ 
Sbjct: 410 KAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNIL 469

Query: 237 TYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI 296
           TYN L+   CK G   +A+ V + ++R  + PDI TYN +I G C+ G++ +   LF ++
Sbjct: 470 TYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNL 529

Query: 297 --KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRI 354
             KG +PN + Y T+I G+CR    EEA  L + M   G  P   TYN+++R   ++G  
Sbjct: 530 SLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDR 589

Query: 355 RDANRLLNEMNEKKIAPDNVTCNTLIN 381
             +  L+ EM     A D  T   + N
Sbjct: 590 EASAELIKEMRSCGFAGDASTIGLVTN 616



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 91/348 (26%), Positives = 169/348 (48%), Gaps = 20/348 (5%)

Query: 83  TMIHILTKNKHFKSAQNMLEKI---ALR-DFLSTPSVLNALVKIHDDPDG---------- 128
           T+I  L K KH   A N+  ++    +R D  +  S+++ L       D           
Sbjct: 263 TIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIER 322

Query: 129 --NSHVLSWLVIFYANLKMTQ--DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMV 184
             N +V+++  +  A +K  +  +  +++D+M   ++ P +   + L+N        D  
Sbjct: 323 KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 382

Query: 185 WKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIAL 244
             +++ M+      N+  Y+ LI   CK+  V++  +L  EM  + +  +  TY TLI  
Sbjct: 383 KHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHG 442

Query: 245 YCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGAT--PN 302
           + +      A  V  +M   G+ P+I+TYN L+ G C+ G++ +A  +F  ++ +T  P+
Sbjct: 443 FFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPD 502

Query: 303 HVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLN 362
             TY  +I+G C+A  +E+   L   ++ KGV P V+ YN+++   C++G   +A+ LL 
Sbjct: 503 IYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLK 562

Query: 363 EMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
           +M E    P++ T NTLI A  + GD  ++ ++   M   G   D  T
Sbjct: 563 KMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST 610



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 53/214 (24%), Positives = 94/214 (43%), Gaps = 1/214 (0%)

Query: 341 YNSILR-KLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRM 399
           Y  ILR +L    ++ DA  L  +M + +  P  V  N L++A  K+      + +  +M
Sbjct: 50  YREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQM 109

Query: 400 LEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNE 459
              G+  D +TY   I+ FC+  ++ +A  +L  M+  G+ P   + S L++GYC+    
Sbjct: 110 QTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRI 169

Query: 460 EALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
              + L+D+ V  G   D   +  LI       K   A  L + M   G   D V Y ++
Sbjct: 170 SDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTV 229

Query: 520 AYAYWRAGEPKACSDILDDMYRRRLMITLKIYRS 553
                + G+      +L  M + ++   + IY +
Sbjct: 230 VNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNT 263


>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g22470, mitochondrial; Flags: Precursor
 gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
 gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
 gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 619

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 123/417 (29%), Positives = 212/417 (50%), Gaps = 6/417 (1%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           SVL    K+  +PD  +   S LV  +       + + + D+M      P L   + L+N
Sbjct: 126 SVLGRAWKLGYEPD--TITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLIN 183

Query: 174 SLA-KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVR 232
            L  K R+++ +  +  +MV+ G   +   Y  +++  CKS +      L  +ME ++++
Sbjct: 184 GLCLKGRVSEALVLI-DRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIK 242

Query: 233 ADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRL 292
           A +  Y+ +I   CK G   +AL++ + ME +GI  D+VTY+SLI G C +G+  +  ++
Sbjct: 243 ASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKM 302

Query: 293 FRDIKGAT--PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
            R++ G    P+ VT++ LID + +   L EA  L   M  +G+ P  +TYNS++   CK
Sbjct: 303 LREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCK 362

Query: 351 EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
           E  + +AN++ + M  K   PD VT + LIN+YCK       M++   +   GL+ +  T
Sbjct: 363 ENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTIT 422

Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFV 470
           Y  L+ GFC++ +++ AKEL   M+  G  PS  +Y  L+DG C+       L++ ++  
Sbjct: 423 YNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQ 482

Query: 471 SRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
              + + + +Y  +I   C   KVD A  LF  +   G+  D V Y  +     + G
Sbjct: 483 KSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKG 539



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 113/396 (28%), Positives = 202/396 (51%), Gaps = 2/396 (0%)

Query: 146 TQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNV 205
             + L + D+M  +   P       +LN L K   + +   +++KM +  + A++  Y++
Sbjct: 191 VSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSI 250

Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
           +I + CK    D    L  EME K ++AD+ TY++LI   C  G   +   +   M    
Sbjct: 251 VIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRN 310

Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEAL 323
           I PD+VT+++LI  F +EG++ EA+ L+ ++  +G  P+ +TY +LIDG+C+ N L EA 
Sbjct: 311 IIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEAN 370

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
           ++ ++M +KG  P +VTY+ ++   CK  R+ D  RL  E++ K + P+ +T NTL+  +
Sbjct: 371 QMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGF 430

Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY 443
           C+ G   +A ++   M+  G+     TY  L+ G C   E++ A E+   M  +  +   
Sbjct: 431 CQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGI 490

Query: 444 CSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNL 503
             Y+ ++ G CN +  +    L      +G+  DV  Y  +I   CKK  +  A  LF  
Sbjct: 491 GIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRK 550

Query: 504 MQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
           M+ +G   D   Y  L  A+       +  +++++M
Sbjct: 551 MKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEM 586



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 118/398 (29%), Positives = 193/398 (48%), Gaps = 2/398 (0%)

Query: 156 MRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSD 215
           M ++ +   ++  T+++N   + +     + V  +  +LG   +   ++ L++  C    
Sbjct: 96  MELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGR 155

Query: 216 VDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNS 275
           V +   L+  M     R DL T +TLI   C KG   EAL + DRM   G  PD VTY  
Sbjct: 156 VSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGP 215

Query: 276 LIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKG 333
           +++  C+ G    A  LFR +  +    + V Y+ +ID  C+    ++AL L   M  KG
Sbjct: 216 VLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKG 275

Query: 334 VYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAM 393
           +   VVTY+S++  LC +G+  D  ++L EM  + I PD VT + LI+ + K G    A 
Sbjct: 276 IKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAK 335

Query: 394 KVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGY 453
           ++ N M+  G+  D  TY +LI GFCK   +  A ++   M+  G  P   +YS L++ Y
Sbjct: 336 ELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSY 395

Query: 454 CNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDS 513
           C     +  ++L  E  S+GL  +   Y  L+  FC+  K++ A+ LF  M   G+    
Sbjct: 396 CKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSV 455

Query: 514 VIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIY 551
           V Y  L       GE     +I + M + R+ + + IY
Sbjct: 456 VTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIY 493



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 109/366 (29%), Positives = 188/366 (51%), Gaps = 2/366 (0%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           L +F +M   N+   +   +++++SL KD   D    ++ +M   G+ A++  Y+ LI  
Sbjct: 230 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 289

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
            C     D   K+L EM  +++  D+ T++ LI ++ K+G   EA  + + M   GI+PD
Sbjct: 290 LCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPD 349

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLRE 327
            +TYNSLI GFC+E  + EA ++F  +  KG  P+ VTY+ LI+ YC+A  +++ +RL  
Sbjct: 350 TITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFR 409

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
            +++KG+ P  +TYN+++   C+ G++  A  L  EM  + + P  VT   L++  C  G
Sbjct: 410 EISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNG 469

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
           +   A+++  +M ++ + L    Y  +IHG C A ++D A  L   + D G  P   +Y+
Sbjct: 470 ELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYN 529

Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGN 507
            ++ G C K +      L  +    G   D   Y  LIR       +  +  L   M+  
Sbjct: 530 VMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVC 589

Query: 508 GILGDS 513
           G   DS
Sbjct: 590 GFSADS 595



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 125/456 (27%), Positives = 206/456 (45%), Gaps = 54/456 (11%)

Query: 171 LLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKD 230
           L N +   ++ D +  +++ M+Q   +     +N L  A  ++   D V      ME   
Sbjct: 42  LRNGIVDIKVNDAI-DLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNG 100

Query: 231 VRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREAR 290
           +  D++T   +I  YC+K     A +V  R  + G  PD +T+++L++GFC EGR+ EA 
Sbjct: 101 IEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAV 160

Query: 291 RLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRK- 347
            L   +      P+ VT +TLI+G C    + EAL L + M   G  P  VTY  +L + 
Sbjct: 161 ALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRL 220

Query: 348 ----------------------------------LCKEGRIRDANRLLNEMNEKKIAPDN 373
                                             LCK+G   DA  L NEM  K I  D 
Sbjct: 221 CKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADV 280

Query: 374 VTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFG 433
           VT ++LI   C  G      K+   M+   ++ D  T+ ALI  F K  ++  AKEL   
Sbjct: 281 VTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNE 340

Query: 434 MLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEK 493
           M+  G +P   +Y+ L+DG+C +N      ++ D  VS+G   D+  Y  LI  +CK ++
Sbjct: 341 MITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKR 400

Query: 494 VDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRS 553
           VD   RLF  +   G++ +++ Y +L   + ++G+  A  ++  +M  R +  ++  Y  
Sbjct: 401 VDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTY-- 458

Query: 554 FSASYAKDNEILDLFWSHVVDRGLMSK--HIFKEMQ 587
                        +    + D G ++K   IF++MQ
Sbjct: 459 ------------GILLDGLCDNGELNKALEIFEKMQ 482



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 96/340 (28%), Positives = 170/340 (50%), Gaps = 2/340 (0%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D L +F++M +  +   +   + L+  L  D   D   K+ ++M+   ++ ++  ++ LI
Sbjct: 263 DALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALI 322

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
               K   + + ++L  EM  + +  D  TYN+LI  +CK+   +EA  + D M  +G  
Sbjct: 323 DVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCE 382

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
           PDIVTY+ LI+ +C+  R+ +  RLFR+I  KG  PN +TY TL+ G+C++  L  A  L
Sbjct: 383 PDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKEL 442

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
            + M ++GV P VVTY  +L  LC  G +  A  +  +M + ++       N +I+  C 
Sbjct: 443 FQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCN 502

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
                 A  +   + + G+  D  TY  +I G CK   +  A  L   M + G +P   +
Sbjct: 503 ASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFT 562

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
           Y+ L+  +   +   + ++L++E    G   D S  + +I
Sbjct: 563 YNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVI 602



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 104/400 (26%), Positives = 190/400 (47%), Gaps = 27/400 (6%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALR----DFLSTPSVLNALVKIHDDPDG 128
           N K S+  +  +I  L K+  F  A ++  ++ ++    D ++  S++  L       DG
Sbjct: 240 NIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCN-----DG 294

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
                 W            DG ++  +M   N++P +   + L++   K+       ++Y
Sbjct: 295 K-----W-----------DDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELY 338

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
            +M+  G+  +   YN LI   CK + + +  ++   M  K    D+ TY+ LI  YCK 
Sbjct: 339 NEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKA 398

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTY 306
               + + +   +  +G+ P+ +TYN+L+ GFC+ G++  A+ LF+++  +G  P+ VTY
Sbjct: 399 KRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTY 458

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
             L+DG C   +L +AL + E M    +  G+  YN I+  +C   ++ DA  L   +++
Sbjct: 459 GILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSD 518

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
           K + PD VT N +I   CK G  + A  +  +M E G   D FTY  LI        +  
Sbjct: 519 KGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLIS 578

Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLL 466
           + EL+  M   GFS    +   ++D   ++  +++ L +L
Sbjct: 579 SVELIEEMKVCGFSADSSTIKMVIDMLSDRRLDKSFLDML 618


>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
 gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
 gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 915

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 165/568 (29%), Positives = 258/568 (45%), Gaps = 71/568 (12%)

Query: 19  AIMLKGHWAKLLNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSL 78
           +I+ K +W K  +P++ S +++ +   V  +L++    P  +  F  W  S  P YKHS+
Sbjct: 68  SILSKPNWHK--SPSLKSMVSAISPSHVS-SLFSLDLDPKTALNFSHWI-SQNPRYKHSV 123

Query: 79  QSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVI 138
            S+ +++ +L  N +      ++ KI L    S  SV +AL           +VL     
Sbjct: 124 YSYASLLTLLINNGYV----GVVFKIRLLMIKSCDSVGDAL-----------YVLDLC-- 166

Query: 139 FYANLKMTQDGLQVFDQMRVHNLMPHLHAC-TVLLNSLAKDRLTDMVWKVYKKMVQLGVV 197
                KM +D        R       +  C   LLNSLA+  L D + +VY +M++  V 
Sbjct: 167 ----RKMNKDE-------RFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVC 215

Query: 198 ANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAV 257
            NI+ YN +++  CK  +V++  + + ++    +  D FTY +LI  YC++     A  V
Sbjct: 216 PNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKV 275

Query: 258 QDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK-------------------- 297
            + M  +G   + V Y  LIHG C   R+ EA  LF  +K                    
Sbjct: 276 FNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCG 335

Query: 298 -----------------GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVT 340
                            G  PN  TYT LID  C     E+A  L   M  KG+ P V+T
Sbjct: 336 SERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVIT 395

Query: 341 YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML 400
           YN+++   CK G I DA  ++  M  +K++P+  T N LI  YCK  +   AM V N+ML
Sbjct: 396 YNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKML 454

Query: 401 EAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEE 460
           E  ++ D  TY +LI G C++   D A  LL  M D G  P   +Y+ ++D  C     E
Sbjct: 455 ERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVE 514

Query: 461 ALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLA 520
               L D    +G+  +V +Y ALI  +CK  KVD A  +   M     L +S+ + +L 
Sbjct: 515 EACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALI 574

Query: 521 YAYWRAGEPKACSDILDDMYRRRLMITL 548
           +     G+ K  + + + M +  L  T+
Sbjct: 575 HGLCADGKLKEATLLEEKMVKIGLQPTV 602



 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 117/393 (29%), Positives = 194/393 (49%), Gaps = 1/393 (0%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           + + +F +M+     P +   TVL+ SL           + K+M + G+  NIH Y VLI
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
            + C     +K  +LL +M  K +  ++ TYN LI  YCK+GM  +A+ V + ME   +S
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI-KGATPNHVTYTTLIDGYCRANDLEEALRLR 326
           P+  TYN LI G+C+    +    L + + +   P+ VTY +LIDG CR+ + + A RL 
Sbjct: 426 PNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLL 485

Query: 327 EVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKI 386
            +M  +G+ P   TY S++  LCK  R+ +A  L + + +K + P+ V    LI+ YCK 
Sbjct: 486 SLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKA 545

Query: 387 GDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSY 446
           G    A  +  +ML    + +  T+ ALIHG C   ++  A  L   M+  G  P+  + 
Sbjct: 546 GKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTD 605

Query: 447 SWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQG 506
           + L+       + +       + +S G   D   Y   I+ +C++ ++  A+ +   M+ 
Sbjct: 606 TILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRE 665

Query: 507 NGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
           NG+  D   Y+SL   Y   G+     D+L  M
Sbjct: 666 NGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRM 698



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 113/395 (28%), Positives = 196/395 (49%), Gaps = 10/395 (2%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           + L +  +M    + P++H  TVL++SL      +   ++  +M++ G++ N+  YN LI
Sbjct: 341 EALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALI 400

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           +  CK   ++    ++  ME + +  +  TYN LI  YCK  +H +A+ V ++M    + 
Sbjct: 401 NGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVH-KAMGVLNKMLERKVL 459

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFR--DIKGATPNHVTYTTLIDGYCRANDLEEALRL 325
           PD+VTYNSLI G CR G    A RL    + +G  P+  TYT++ID  C++  +EEA  L
Sbjct: 460 PDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDL 519

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
            + +  KGV P VV Y +++   CK G++ +A+ +L +M  K   P+++T N LI+  C 
Sbjct: 520 FDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCA 579

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            G    A  ++ +M++ GL     T   LIH   K  + D A      ML +G  P   +
Sbjct: 580 DGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHT 639

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+  +  YC +        ++ +    G+  D+  Y +LI+ +    + ++A  +   M+
Sbjct: 640 YTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMR 699

Query: 506 GNGILGDSVIYTSL-------AYAYWRAGEPKACS 533
             G       + SL        Y   +  EP+ C+
Sbjct: 700 DTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCA 734



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 121/431 (28%), Positives = 203/431 (47%), Gaps = 50/431 (11%)

Query: 194 LGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADL------FTYNTLIALYCK 247
           +GVV  I L  ++I +C    D   V  L C    KD R +L        YNTL+    +
Sbjct: 139 VGVVFKIRL--LMIKSCDSVGDALYVLDL-CRKMNKDERFELKYKLIIGCYNTLLNSLAR 195

Query: 248 KGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVT 305
            G+  E   V   M  + + P+I TYN +++G+C+ G + EA +    I   G  P+  T
Sbjct: 196 FGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFT 255

Query: 306 YTTLIDGYCRANDLEEALRLREVMAAKG-------------------------------- 333
           YT+LI GYC+  DL+ A ++   M  KG                                
Sbjct: 256 YTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMK 315

Query: 334 ---VYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTA 390
               +P V TY  +++ LC   R  +A  L+ EM E  I P+  T   LI++ C      
Sbjct: 316 DDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFE 375

Query: 391 SAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLV 450
            A ++  +MLE GLM +  TY ALI+G+CK   ++ A +++  M     SP+  +Y+ L+
Sbjct: 376 KARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELI 435

Query: 451 DGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGIL 510
            GYC  N  +A + +L++ + R +  DV  Y +LI   C+    D A RL +LM   G++
Sbjct: 436 KGYCKSNVHKA-MGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLV 494

Query: 511 GDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWS 570
            D   YTS+  +  ++   +   D+ D + ++ +   + +Y +    Y K  ++ +   +
Sbjct: 495 PDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDE---A 551

Query: 571 HVVDRGLMSKH 581
           H++   ++SK+
Sbjct: 552 HLMLEKMLSKN 562



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 105/432 (24%), Positives = 176/432 (40%), Gaps = 61/432 (14%)

Query: 156 MRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSD 215
           M    L+P     T +++SL K +  +    ++  + Q GV  N+ +Y  LI   CK+  
Sbjct: 488 MNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGK 547

Query: 216 VDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNS 275
           VD+   +L +M  K+   +  T+N LI   C  G   EA  ++++M + G+ P + T   
Sbjct: 548 VDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTI 607

Query: 276 LIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKG 333
           LIH   ++G    A   F+ +   G  P+  TYTT I  YCR   L +A  +   M   G
Sbjct: 608 LIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENG 667

Query: 334 VYPGVVTYNSILRKLCKEG----------RIRDAN------------------------- 358
           V P + TY+S+++     G          R+RD                           
Sbjct: 668 VSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKG 727

Query: 359 ------------------RLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML 400
                              LL +M E  + P+  +   LI   C++G+   A KV + M 
Sbjct: 728 SEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQ 787

Query: 401 E-AGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNE 459
              G+   +  + AL+   CK K+ + A +++  M+  G  P   S   L+ G   K  +
Sbjct: 788 RNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEK 847

Query: 460 EALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
           E    +    +  G   D   ++ +I    K+  V+    LFN+M+ NG       ++S 
Sbjct: 848 ERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNG-----CKFSSQ 902

Query: 520 AYAYWRAGEPKA 531
            Y+    G P +
Sbjct: 903 TYSLLIEGPPDS 914



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 99/438 (22%), Positives = 178/438 (40%), Gaps = 41/438 (9%)

Query: 73  NYKHSLQSHWT---MIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGN 129
           N +  +   WT   MI  L K+K  + A ++ + +  +       +  AL+      DG 
Sbjct: 489 NDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALI------DG- 541

Query: 130 SHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYK 189
                     Y       +   + ++M   N +P+      L++ L  D        + +
Sbjct: 542 ----------YCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEE 591

Query: 190 KMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKG 249
           KMV++G+   +    +LIH   K  D D       +M     + D  TY T I  YC++G
Sbjct: 592 KMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREG 651

Query: 250 MHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYT 307
              +A  +  +M   G+SPD+ TY+SLI G+   G+   A  + + ++  G  P+  T+ 
Sbjct: 652 RLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFL 711

Query: 308 TLI---------------DGYCRANDLEE---ALRLREVMAAKGVYPGVVTYNSILRKLC 349
           +LI                  C  +++ E    + L E M    V P   +Y  ++  +C
Sbjct: 712 SLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGIC 771

Query: 350 KEGRIRDANRLLNEMNEKK-IAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ 408
           + G +R A ++ + M   + I+P  +  N L++  CK+     A KV + M+  G +   
Sbjct: 772 EVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQL 831

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
            + K LI G  K  E +    +   +L  G+     ++  ++DG   +   EA  +L + 
Sbjct: 832 ESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNV 891

Query: 469 FVSRGLCVDVSVYRALIR 486
               G       Y  LI 
Sbjct: 892 MEKNGCKFSSQTYSLLIE 909



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 99/378 (26%), Positives = 155/378 (41%), Gaps = 40/378 (10%)

Query: 97  AQNMLEKIALRDFLSTPSVLNALVKIHD-DPDGNSHVLSWLVIFYANLKMTQDGLQVFDQ 155
           A  MLEK+  ++ L      NAL  IH    DG     + L       KM + GLQ    
Sbjct: 551 AHLMLEKMLSKNCLPNSLTFNAL--IHGLCADGKLKEATLL-----EEKMVKIGLQ---- 599

Query: 156 MRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSD 215
                  P +   T+L++ L KD   D  +  +++M+  G   + H Y   I   C+   
Sbjct: 600 -------PTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGR 652

Query: 216 VDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNS 275
           +   E ++ +M    V  DLFTY++LI  Y   G    A  V  RM   G  P   T+ S
Sbjct: 653 LLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLS 712

Query: 276 LIH---------------GFCREGRMREARRLFRDIK-----GATPNHVTYTTLIDGYCR 315
           LI                  C    M E   +   ++       TPN  +Y  LI G C 
Sbjct: 713 LIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICE 772

Query: 316 ANDLEEALRLREVMAA-KGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNV 374
             +L  A ++ + M   +G+ P  + +N++L   CK  +  +A +++++M      P   
Sbjct: 773 VGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLE 832

Query: 375 TCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGM 434
           +C  LI    K G+      V   +L+ G   D+  +K +I G  K   ++   EL   M
Sbjct: 833 SCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVM 892

Query: 435 LDAGFSPSYCSYSWLVDG 452
              G   S  +YS L++G
Sbjct: 893 EKNGCKFSSQTYSLLIEG 910


>gi|449460167|ref|XP_004147817.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Cucumis sativus]
          Length = 942

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 144/539 (26%), Positives = 256/539 (47%), Gaps = 8/539 (1%)

Query: 33  NIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNK 92
           N++ S ++  +  VL NL      P  S  FFK A S  P ++  + S+  ++HIL++ +
Sbjct: 91  NLSFSFSNELMDLVLRNLR---LNPDASLEFFKLA-SKQPKFRPDVSSYCKIVHILSRAR 146

Query: 93  HFKSAQNMLEKIAL--RDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGL 150
            +K  +  L ++ +  ++     +V + LV ++ +   +  V   ++  +A   MT+  L
Sbjct: 147 MYKEVRVYLNELVVLCKNNYIASAVWDELVSVYREFSFSPTVFDMILKVFAEKGMTKFAL 206

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
            VFD M     +P L +C  LL++L ++        VY++M+ LG++ +I  Y ++++A 
Sbjct: 207 CVFDNMGKCGRVPSLRSCNSLLSNLVQNGEAFKALLVYEQMIALGILPDIFSYTIMVNAY 266

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           CK   VD+    + EME      ++ TYN+LI  Y   G    A  V   M  +GI  + 
Sbjct: 267 CKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENS 326

Query: 271 VTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
            TY  LI G+C+ G+M +A +L   +  K    +   Y  LI  YC A  +++ALR+R+ 
Sbjct: 327 RTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDA 386

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M   G+    V  NS++   CK G +  A  +L  M +  + PD+   NTL++ +CK  D
Sbjct: 387 MLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQED 446

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
              A K+ + M   G+     TY  L+        ++ A  +   M   G +P+  +Y  
Sbjct: 447 FIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCT 506

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG 508
           L+D +      +  + +  + +S+G    +++Y  +I  FCK EK+  AQ +F  M+  G
Sbjct: 507 LLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELG 566

Query: 509 ILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDL 567
              D + Y +L   Y + G       + D   R  +  + ++Y S      +  E+  L
Sbjct: 567 FPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGVFRSEELQKL 625



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 112/433 (25%), Positives = 198/433 (45%), Gaps = 37/433 (8%)

Query: 146 TQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNV 205
            +  L +++ M    + P+      LL++  K    D    ++K  +  G   +I LYN 
Sbjct: 482 VEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNT 541

Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
           +I   CK   + + +++  +M+      D  TY TLI  YCK G   EAL ++D  ER+G
Sbjct: 542 MICGFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDG 601

Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRDIKGA--TPNHVTYTTLIDGYCRANDLEEAL 323
           IS     YNSLI G  R   +++   L  ++K    +PN VTY +LI G+C    +++A 
Sbjct: 602 ISSSTEMYNSLITGVFRSEELQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAY 661

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE----------------- 366
                M  KG+ P ++  + I+  L + G+I +AN +L+++ +                 
Sbjct: 662 NAYFKMIDKGIAPNIIIGSKIVSSLYRHGKIDEANLILHQIADIDPIAAHAHSVELPKSD 721

Query: 367 ------KKIA------------PDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ 408
                 +KI              +N+  N  I   CK  +     ++ + +L  G   D 
Sbjct: 722 LRHLETQKIVDSFGKKAMSIPISNNIVYNIAITGLCKSKNIDDVRRILSDLLLKGFCPDN 781

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
           +TY +LIH      +++ A  L   M++AG  P+   Y+ L++G C   N +   +L ++
Sbjct: 782 YTYCSLIHACSAVGKVNEAFCLRDDMINAGLVPNIVVYNALINGLCKSGNLDRARRLFNK 841

Query: 469 FVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
              +GL   V  Y  LI  +CK  +   A  L + M+  GI   S+ Y++L +  +  G+
Sbjct: 842 LARKGLSPTVVTYNTLIDGYCKGGRTTEALELKDKMREEGICPSSITYSTLIHGLYMEGK 901

Query: 529 PKACSDILDDMYR 541
            +    +L++M +
Sbjct: 902 SEQSVGLLNEMMK 914



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 100/397 (25%), Positives = 191/397 (48%), Gaps = 4/397 (1%)

Query: 104 IALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMP 163
           ++L D      VL AL+     P+ NS   + L+  Y      +   ++   M   NL  
Sbjct: 302 VSLGDVCGAKKVL-ALMSEKGIPE-NSRTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFV 359

Query: 164 HLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLL 223
             H   VL+++       D   ++   M+++G+  N  + N LI+  CK   V+K  ++L
Sbjct: 360 DEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVL 419

Query: 224 CEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCRE 283
             M+  +++ D + YNTL+  +CK+    +A  + D M  +G++  +VTYN+L+      
Sbjct: 420 VSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHV 479

Query: 284 GRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTY 341
           G +  A  ++  +  +G  PN VTY TL+D + +    + A+ + +   +KG    +  Y
Sbjct: 480 GHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLY 539

Query: 342 NSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLE 401
           N+++   CK  ++  A  +  +M E    PD +T  TLI+ YCK+G+   A+K+K+    
Sbjct: 540 NTMICGFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSER 599

Query: 402 AGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEA 461
            G+      Y +LI G  +++E+     LL  M +   SP+  +Y  L+ G+C+K   + 
Sbjct: 600 DGISSSTEMYNSLITGVFRSEELQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDK 659

Query: 462 LLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQ 498
                 + + +G+  ++ +   ++    +  K+D A 
Sbjct: 660 AYNAYFKMIDKGIAPNIIIGSKIVSSLYRHGKIDEAN 696



 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 120/518 (23%), Positives = 201/518 (38%), Gaps = 107/518 (20%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           + HV   L+  Y       D L++ D M    L  +   C  L+N   K    +   +V 
Sbjct: 360 DEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVL 419

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
             M    +  + + YN L+   CK  D  K  KL  EM  K V   + TYNTL+      
Sbjct: 420 VSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHV 479

Query: 249 GMHYEALAVQDRMEREGISPDIVTY----------------------------------- 273
           G    AL + + M + G++P+ VTY                                   
Sbjct: 480 GHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLY 539

Query: 274 NSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAA 331
           N++I GFC+  ++ +A+ +F  +K  G  P+ +TY TLIDGYC+  +L EAL+L+++   
Sbjct: 540 NTMICGFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSER 599

Query: 332 KGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTAS 391
            G+      YNS++  + +   ++  N LL EM  ++++P+ VT  +LI  +C  G    
Sbjct: 600 DGISSSTEMYNSLITGVFRSEELQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDK 659

Query: 392 AMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA-------------- 437
           A     +M++ G+  +      ++    +  ++D A  +L  + D               
Sbjct: 660 AYNAYFKMIDKGIAPNIIIGSKIVSSLYRHGKIDEANLILHQIADIDPIAAHAHSVELPK 719

Query: 438 -------------GFSPSYCS--------YSWLVDGYCNKNNEEALLKLLDEFVSRGLCV 476
                         F     S        Y+  + G C   N + + ++L + + +G C 
Sbjct: 720 SDLRHLETQKIVDSFGKKAMSIPISNNIVYNIAITGLCKSKNIDDVRRILSDLLLKGFCP 779

Query: 477 D-----------------------------------VSVYRALIRRFCKKEKVDYAQRLF 501
           D                                   + VY ALI   CK   +D A+RLF
Sbjct: 780 DNYTYCSLIHACSAVGKVNEAFCLRDDMINAGLVPNIVVYNALINGLCKSGNLDRARRLF 839

Query: 502 NLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
           N +   G+    V Y +L   Y + G      ++ D M
Sbjct: 840 NKLARKGLSPTVVTYNTLIDGYCKGGRTTEALELKDKM 877



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 44/109 (40%), Positives = 67/109 (61%)

Query: 191 MVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGM 250
           M+  G+V NI +YN LI+  CKS ++D+  +L  ++  K +   + TYNTLI  YCK G 
Sbjct: 807 MINAGLVPNIVVYNALINGLCKSGNLDRARRLFNKLARKGLSPTVVTYNTLIDGYCKGGR 866

Query: 251 HYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGA 299
             EAL ++D+M  EGI P  +TY++LIHG   EG+  ++  L  ++  A
Sbjct: 867 TTEALELKDKMREEGICPSSITYSTLIHGLYMEGKSEQSVGLLNEMMKA 915


>gi|357463605|ref|XP_003602084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355491132|gb|AES72335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 579

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 131/454 (28%), Positives = 215/454 (47%), Gaps = 38/454 (8%)

Query: 130 SHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYK 189
           +H+L+ LV     +      + +F Q+  + + P +   T+L+N          ++ +  
Sbjct: 14  NHILASLV----KINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGGITFLFSILT 69

Query: 190 KMVQLGVVANIHLYNVLIHACCKSSD-----------------VDKVE-----KLLCEME 227
           K++++G   N   +  LI   C +                   +D+V        LC+M 
Sbjct: 70  KILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLCKMG 129

Query: 228 FKD----------VRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLI 277
                        V AD+  Y+T+I   CK     +A  +   M  +GI P++ T++ L+
Sbjct: 130 ETRAAMQMLRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSILV 189

Query: 278 HGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVY 335
              C++ + ++A  L   +  KG  PN VTY  ++DGYC  N + +AL +  VM  +GV 
Sbjct: 190 DALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVE 249

Query: 336 PGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKV 395
           P V  YN I+  LCK+ R+ +A  L  EM+ KKI PD VT N LI+  CK+G  ++++++
Sbjct: 250 PNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLEL 309

Query: 396 KNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCN 455
            + M   G  +D  TY +L+H  CK   +D A  L+  + D G  P+ C+Y+ L+DG C 
Sbjct: 310 VDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCK 369

Query: 456 KNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVI 515
               E    +  E ++ G  + V  Y  +I   CKK   D A  L + M+ N  + D+V 
Sbjct: 370 DGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRMEDNACIPDAVS 429

Query: 516 YTSLAYAYWRAGEPKACSDILDDMYRRRLMITLK 549
           Y ++ YA    GE    + +L  M  R L   LK
Sbjct: 430 YETIIYALSEKGETVKTNKLLCAMIVRGLSKRLK 463



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 105/381 (27%), Positives = 182/381 (47%), Gaps = 1/381 (0%)

Query: 171 LLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKD 230
           +L SL K         +++++   G+  +I    +L++  C +  +  +  +L ++    
Sbjct: 16  ILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGGITFLFSILTKILKMG 75

Query: 231 VRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREAR 290
              +  T+ TLI   C  G  YEAL   D +   G   D V+Y  L++G C+ G  R A 
Sbjct: 76  YEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLCKMGETRAAM 135

Query: 291 RLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
           ++ R       + V Y+T+ID  C+   + +A RL   M AKG++P V T++ ++  LCK
Sbjct: 136 QMLRK-TWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSILVDALCK 194

Query: 351 EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
           + + + A  LL  M +K + P+ VT   +++ YC +     A+ + N M++ G+  + + 
Sbjct: 195 DRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWC 254

Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFV 470
           Y  +I+G CK K +D A  L   M     +P   +Y+ L+DG C        L+L+DE  
Sbjct: 255 YNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLELVDEMR 314

Query: 471 SRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPK 530
           S G  VD+  Y +L+   CK   +D A  L   ++  GI  +   YT+L     + G  +
Sbjct: 315 SIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLE 374

Query: 531 ACSDILDDMYRRRLMITLKIY 551
               I  ++      IT+  Y
Sbjct: 375 DAYVIFQEILTEGYHITVWTY 395



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 90/332 (27%), Positives = 155/332 (46%), Gaps = 5/332 (1%)

Query: 235 LFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR 294
           +  +N ++A   K   +  A+++  ++E  GI P IVT   L++ +C  G +     +  
Sbjct: 10  ILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGGITFLFSILT 69

Query: 295 DI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEG 352
            I   G  PN +T+TTLI G C      EAL   + + A G     V+Y  ++  LCK G
Sbjct: 70  KILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLCKMG 129

Query: 353 RIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYK 412
             R A ++L +     +  D V  +T+I++ CK      A ++ + M+  G+  + +T+ 
Sbjct: 130 ETRAAMQMLRK---TWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFS 186

Query: 413 ALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSR 472
            L+   CK ++   A  LL  M+  G  P+  +Y  ++DGYC  N     L + +  V  
Sbjct: 187 ILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQE 246

Query: 473 GLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKAC 532
           G+  +V  Y  +I   CKK++VD A  LF  M    I  D V Y  L     + G+    
Sbjct: 247 GVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTS 306

Query: 533 SDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
            +++D+M      + +  Y S   +  K++ +
Sbjct: 307 LELVDEMRSIGKTVDIITYNSLLHALCKNHHL 338



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/244 (22%), Positives = 101/244 (41%), Gaps = 3/244 (1%)

Query: 299 ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDAN 358
            TP  + +  ++    + N    A+ L   +   G+ P +VT   ++   C  G I    
Sbjct: 6   PTPPILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGGITFLF 65

Query: 359 RLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGF 418
            +L ++ +    P+++T  TLI   C  G    A+   + ++  G  LDQ +Y  L++G 
Sbjct: 66  SILTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGL 125

Query: 419 CKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDV 478
           CK  E   A ++L        +     YS ++D  C         +L  E +++G+  +V
Sbjct: 126 CKMGETRAAMQML---RKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNV 182

Query: 479 SVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDD 538
             +  L+   CK  K   A  L  +M   G+  + V Y ++   Y    +     +I + 
Sbjct: 183 YTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNV 242

Query: 539 MYRR 542
           M + 
Sbjct: 243 MVQE 246


>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 600

 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 140/490 (28%), Positives = 235/490 (47%), Gaps = 19/490 (3%)

Query: 85  IHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLK 144
           + +L +    ++A  +   + L     +P++L+AL  + D        +S+  +  A  +
Sbjct: 16  LAVLLRRGRGEAAARLNRHLRLLPLPESPALLSALPSVRD-------AVSYNTVLAALCR 68

Query: 145 MTQDGLQVFDQMRVHNLMPHLHA------CTVLLNSLAKDRLTDMVWKVYKKMVQLGVVA 198
                  +F  +RV +  P L +       T L+ +L  DR       + + M   GV  
Sbjct: 69  QGCLDAALF-LLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAVGLLRSMQDCGVRP 127

Query: 199 NIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQ 258
           ++  Y  LI   C ++DVD   +LL EM    +  ++  Y+ L+  YCK G       V 
Sbjct: 128 DVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCKTGRWESVGKVF 187

Query: 259 DRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRA 316
           + M   GI PD+V Y +LI   CR G++++A R+   +  +G  PN VTY  LI+  C+ 
Sbjct: 188 EEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKE 247

Query: 317 NDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM--NEKKIAPDNV 374
             + EAL LR+ M+ KGV P VVTYN+++  L     + +A  LL EM   E ++ PD +
Sbjct: 248 GSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGETRVRPDLM 307

Query: 375 TCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGM 434
           T N++I+  CKIG    A++V+  M E G   +   +  LI G  +  ++  A EL+  M
Sbjct: 308 TFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEM 367

Query: 435 LDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKV 494
             +G  P   +YS L++G+C     E     L E   +G+  +   Y  L++  C +  +
Sbjct: 368 ASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMM 427

Query: 495 DYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSF 554
             A+ LFN M  N  L D+  Y+++ +  +++GE K   + L DM    L+     Y   
Sbjct: 428 GQARDLFNEMDRNCKL-DAAAYSTMIHGAFKSGEKKIAEEFLKDMIDEGLIPDAVTYSIP 486

Query: 555 SASYAKDNEI 564
              +AK  ++
Sbjct: 487 INMFAKSGDL 496



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 118/412 (28%), Positives = 196/412 (47%), Gaps = 8/412 (1%)

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
           P +     L+  L      D   ++  +M + G+  N+ +Y+ L+H  CK+   + V K+
Sbjct: 127 PDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCKTGRWESVGKV 186

Query: 223 LCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR 282
             EM  + +  D+  Y  LI   C+ G   +A  V D M   G+ P++VTYN LI+  C+
Sbjct: 187 FEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCK 246

Query: 283 EGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVM--AAKGVYPGV 338
           EG +REA  L +++  KG  P+ VTY TLI G     +++EA+ L E M      V P +
Sbjct: 247 EGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGETRVRPDL 306

Query: 339 VTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNR 398
           +T+NS++  LCK G +R A ++   M E     + V  N LI    ++     AM++ + 
Sbjct: 307 MTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDE 366

Query: 399 MLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNN 458
           M  +GL  D FTY  LI+GFCK ++++ A+  L  M   G  P    Y  L+   C++  
Sbjct: 367 MASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGM 426

Query: 459 EEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTS 518
                 L +E   R   +D + Y  +I    K  +   A+     M   G++ D+V Y+ 
Sbjct: 427 MGQARDLFNEM-DRNCKLDAAAYSTMIHGAFKSGEKKIAEEFLKDMIDEGLIPDAVTYSI 485

Query: 519 LAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNE---ILDL 567
               + ++G+  A   +L  M     +  + ++ S    Y    +   IL+L
Sbjct: 486 PINMFAKSGDLAAAERVLKQMTASGFVPDVAVFDSLIQGYGAKGDTEKILEL 537



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 109/425 (25%), Positives = 203/425 (47%), Gaps = 5/425 (1%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           +++ ++M    + P++   + LL+   K    + V KV+++M   G+  ++ +Y  LI +
Sbjct: 149 VELLNEMCESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDS 208

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
            C+   V K  +++  M  + +  ++ TYN LI   CK+G   EAL ++  M  +G+ PD
Sbjct: 209 LCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPD 268

Query: 270 IVTYNSLIHGFCREGRMREARRLFRD-IKGAT---PNHVTYTTLIDGYCRANDLEEALRL 325
           +VTYN+LI G      M EA  L  + ++G T   P+ +T+ ++I G C+   + +AL++
Sbjct: 269 VVTYNTLITGLSSVLEMDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQV 328

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
           R +MA  G    +V +N ++  L +  +++ A  L++EM    + PD+ T + LIN +CK
Sbjct: 329 RAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCK 388

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
           +     A    + M   G+  +   Y  L+   C    M  A++ LF  +D        +
Sbjct: 389 MRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARD-LFNEMDRNCKLDAAA 447

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           YS ++ G      ++   + L + +  GL  D   Y   I  F K   +  A+R+   M 
Sbjct: 448 YSTMIHGAFKSGEKKIAEEFLKDMIDEGLIPDAVTYSIPINMFAKSGDLAAAERVLKQMT 507

Query: 506 GNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEIL 565
            +G + D  ++ SL   Y   G+ +   ++  +M  + + +  KI  +   S     E  
Sbjct: 508 ASGFVPDVAVFDSLIQGYGAKGDTEKILELTREMTAKDVALDPKIISTIVTSLGASIEGQ 567

Query: 566 DLFWS 570
            L  S
Sbjct: 568 KLLQS 572


>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Brachypodium distachyon]
          Length = 787

 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 124/430 (28%), Positives = 208/430 (48%), Gaps = 41/430 (9%)

Query: 140 YANLKMTQDGLQVFDQMRVH-NLMPHLHACTVLLNSLAKDRLT--DMVWKVYKKMVQLGV 196
           Y+ L++     Q+   +R    + P L A   +L++LA+   T        ++ +V L +
Sbjct: 141 YSRLRLPHLAAQLLHSLRRRVRVRPSLQAANAVLSALARSPSTSPQASLDAFRSIVALRL 200

Query: 197 VANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALA 256
             N + +N+L+H  C    +      L  M+   +  D  TYNTL+  +C+KGM  EA A
Sbjct: 201 HPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARA 260

Query: 257 VQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYC 314
           +  RM+++G++P   TYN+L+  + R G +++A ++   +   G  P+  TY  L  G C
Sbjct: 261 LLARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLC 320

Query: 315 RANDLEEALRLR------------------------------------EVMAAKGVYPGV 338
           +A  ++EA RL+                                    E M  KGV   +
Sbjct: 321 QAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATL 380

Query: 339 VTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNR 398
           VT+N +++ LCK+G +  A   LN+M +  +APD +T NTLI+A+CK G+ A A  + + 
Sbjct: 381 VTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDE 440

Query: 399 MLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNN 458
           M+  GL LD FT   +++  CK K  + A+ LL      GF P   SY  ++  Y  + N
Sbjct: 441 MVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYN 500

Query: 459 EEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTS 518
            E  L+L DE + + L   +S Y  LI+   +  ++  A    N +   G++ D   Y  
Sbjct: 501 SEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNI 560

Query: 519 LAYAYWRAGE 528
           + +AY + G+
Sbjct: 561 IIHAYCKEGD 570



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 130/432 (30%), Positives = 211/432 (48%), Gaps = 8/432 (1%)

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           LV  YA L   +   +V + M  +   P L    VL   L +    D  +++  +M +LG
Sbjct: 280 LVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLG 339

Query: 196 -VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEA 254
            ++ ++  YN L  AC K        +LL EM  K V+A L T+N +I   CK G    A
Sbjct: 340 TLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGA 399

Query: 255 LAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDG 312
           L   ++M  +G++PD++TYN+LIH  C+ G + +A  L  ++  +G   +  T  T++  
Sbjct: 400 LGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYN 459

Query: 313 YCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPD 372
            C+    EEA  L +    +G  P  V+Y +++    KE     A RL +EM EKK+ P 
Sbjct: 460 LCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPS 519

Query: 373 NVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLF 432
             T NTLI    ++G    A+   N ++E GL+ D  TY  +IH +CK  +++ A +   
Sbjct: 520 ISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHN 579

Query: 433 GMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKE 492
            M++  F P   + + L++G C     +  LKL + +V +G  VDV  Y  LI+  CK  
Sbjct: 580 KMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDG 639

Query: 493 KVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYR 552
            VD A   F  M+  G+  D+  Y  +  A   AG  +   ++L      +L  +  + +
Sbjct: 640 DVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNML-----HKLAESGTLSQ 694

Query: 553 SFSASYAKDNEI 564
           SFS+   K + +
Sbjct: 695 SFSSPLLKPSSV 706



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 116/442 (26%), Positives = 209/442 (47%), Gaps = 38/442 (8%)

Query: 148 DGLQVFDQM-RVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           +  ++ D+M R+  L+P +     L ++  K R +    ++ ++M + GV A +  +N++
Sbjct: 327 EAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIV 386

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           I   CK  +++     L +M    +  D+ TYNTLI  +CK G   +A  + D M R G+
Sbjct: 387 IKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGL 446

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
             D  T N++++  C+E R  EA+ L +    +G  P+ V+Y T++  Y +  + E ALR
Sbjct: 447 KLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALR 506

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           L + M  K + P + TYN++++ L + GR+++A   LNE+ EK + PD+ T N +I+AYC
Sbjct: 507 LWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYC 566

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           K GD  +A +  N+M+E     D  T   L++G C   ++D A +L    ++ G      
Sbjct: 567 KEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVI 626

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
           +Y+ L+   C   + +  L    +  +RGL  D   Y  ++    +  + + AQ + + +
Sbjct: 627 TYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKL 686

Query: 505 QGNGILGDSV-----------------------------------IYTSLAYAYWRAGEP 529
             +G L  S                                     YT L      +G+ 
Sbjct: 687 AESGTLSQSFSSPLLKPSSVDEAESGKDAKTEEETVENPQDSASEAYTKLVNGLCTSGQF 746

Query: 530 KACSDILDDMYRRRLMITLKIY 551
           K    ILD+M ++ + +    Y
Sbjct: 747 KEAKAILDEMMQKGMSVDSSTY 768



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 114/420 (27%), Positives = 180/420 (42%), Gaps = 72/420 (17%)

Query: 146 TQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNV 205
           + D L++ ++MR   +   L    +++  L KD   +       KM   G+  ++  YN 
Sbjct: 361 SSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNT 420

Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEA----------- 254
           LIHA CK+ ++ K   L+ EM  + ++ D FT NT++   CK+  + EA           
Sbjct: 421 LIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRG 480

Query: 255 ------------------------LAVQDRMEREGISPDIVTYNSLIHGFCREGRMREAR 290
                                   L + D M  + ++P I TYN+LI G  R GR++EA 
Sbjct: 481 FMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAI 540

Query: 291 RLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
               ++  KG  P+  TY  +I  YC+  DLE A +    M      P VVT N+++  L
Sbjct: 541 DKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGL 600

Query: 349 CKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ 408
           C  G++  A +L     EK    D +T NTLI   CK GD  +A+     M   GL  D 
Sbjct: 601 CLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDA 660

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAG-FSPSYCS---------------------- 445
           FTY  ++    +A   + A+ +L  + ++G  S S+ S                      
Sbjct: 661 FTYNVVLSALSEAGRTEEAQNMLHKLAESGTLSQSFSSPLLKPSSVDEAESGKDAKTEEE 720

Query: 446 ------------YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEK 493
                       Y+ LV+G C     +    +LDE + +G+ VD S Y  L+    K++K
Sbjct: 721 TVENPQDSASEAYTKLVNGLCTSGQFKEAKAILDEMMQKGMSVDSSTYITLMEGLVKRQK 780


>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
 gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 559

 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 133/449 (29%), Positives = 218/449 (48%), Gaps = 40/449 (8%)

Query: 162 MPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEK 221
           +P +     LL+++AK +  D+V  + +KM +LG+  N++ YN+LI+  C+ S +     
Sbjct: 7   LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALA 66

Query: 222 LLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFC 281
           LL +M        + T ++L+  YC      +A+A+ D+M   G  PD +T+ +LIHG  
Sbjct: 67  LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 126

Query: 282 REGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLE------------------- 320
              +  EA  L   +  +G  PN VTY  +++G C+  D++                   
Sbjct: 127 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVV 186

Query: 321 ----------------EALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM 364
                           +AL L + M  KG+ P VVTY+S++  LC  GR  DA++LL++M
Sbjct: 187 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 246

Query: 365 NEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEM 424
            EKKI P+ VT N LI+A+ K G    A K+ + M++  +  D FTY +LI+GFC    +
Sbjct: 247 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRL 306

Query: 425 DIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRAL 484
           D AK++   M+     P   +Y+ L+ G+C     E   +L  E   RGL  D   Y  L
Sbjct: 307 DKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 366

Query: 485 IRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL 544
           I+        D AQ++F  M  +G+  D + Y+ L       G+ +   ++ D M +  +
Sbjct: 367 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 426

Query: 545 MITLKIYRSFSASYAKDNEI---LDLFWS 570
            + + IY +      K  ++    DLF S
Sbjct: 427 KLDIYIYTTMIEGMCKAGKVDDGWDLFCS 455



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 116/401 (28%), Positives = 203/401 (50%), Gaps = 2/401 (0%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
            + + + D+M      P+L    V++N L K    D+ + +  KM    + A++ ++N +
Sbjct: 132 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTI 191

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           I + CK   VD    L  EME K +R ++ TY++LI+  C  G   +A  +   M  + I
Sbjct: 192 IDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 251

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
           +P++VT+N+LI  F +EG+  EA +L  D+  +   P+  TY +LI+G+C  + L++A +
Sbjct: 252 NPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQ 311

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           + E M +K  +P + TYN++++  CK  R+ D   L  EM+ + +  D VT  TLI    
Sbjct: 312 MFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLF 371

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
             GD  +A KV  +M+  G+  D  TY  L+ G C   +++ A E+   M  +       
Sbjct: 372 HDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIY 431

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
            Y+ +++G C     +    L      +G+  +V  Y  +I   C K  +  A  L   M
Sbjct: 432 IYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKM 491

Query: 505 QGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
           + +G L DS  Y +L  A+ R G+  A ++++ +M   R +
Sbjct: 492 KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFV 532



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 101/346 (29%), Positives = 174/346 (50%), Gaps = 2/346 (0%)

Query: 170 VLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFK 229
            +++SL K R  D    ++K+M   G+  N+  Y+ LI   C         +LL +M  K
Sbjct: 190 TIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK 249

Query: 230 DVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA 289
            +  +L T+N LI  + K+G   EA  + D M +  I PDI TYNSLI+GFC   R+ +A
Sbjct: 250 KINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKA 309

Query: 290 RRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRK 347
           +++F  +  K   P+  TY TLI G+C++  +E+   L   M+ +G+    VTY ++++ 
Sbjct: 310 KQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQG 369

Query: 348 LCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLD 407
           L  +G   +A ++  +M    + PD +T + L++  C  G    A++V + M ++ + LD
Sbjct: 370 LFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLD 429

Query: 408 QFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLD 467
            + Y  +I G CKA ++D   +L   +   G  P+  +Y+ ++ G C+K   +    LL 
Sbjct: 430 IYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLK 489

Query: 468 EFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDS 513
           +    G   D   Y  LIR   +      +  L   M+    +GD+
Sbjct: 490 KMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDA 535



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 68/233 (29%), Positives = 109/233 (46%), Gaps = 2/233 (0%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           Q+F+ M   +  P L     L+    K +  +   +++++M   G+V +   Y  LI   
Sbjct: 311 QMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL 370

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
               D D  +K+  +M    V  D+ TY+ L+   C  G   +AL V D M++  I  DI
Sbjct: 371 FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI 430

Query: 271 VTYNSLIHGFCREGRMREARRLF--RDIKGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
             Y ++I G C+ G++ +   LF    +KG  PN VTY T+I G C    L+EA  L + 
Sbjct: 431 YIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKK 490

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
           M   G  P   TYN+++R   ++G    +  L+ EM   +   D  T   + N
Sbjct: 491 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVAN 543



 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 53/227 (23%), Positives = 98/227 (43%), Gaps = 12/227 (5%)

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
           M + +  P     N L++A  K+      + +  +M   G+  + +TY  LI+ FC+  +
Sbjct: 1   MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60

Query: 424 MDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRA 483
           + +A  LL  M+  G+ PS  + S L++GYC+       + L+D+ V  G   D   +  
Sbjct: 61  ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120

Query: 484 LIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRR 543
           LI       K   A  L + M   G   + V Y  +     + G+     ++L+ M   +
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180

Query: 544 LMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKEMQLRN 590
           +   + I+ +   S  K        + HV D    + ++FKEM+ + 
Sbjct: 181 IEADVVIFNTIIDSLCK--------YRHVDD----ALNLFKEMETKG 215


>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
          Length = 1269

 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 116/376 (30%), Positives = 193/376 (51%), Gaps = 4/376 (1%)

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           + A CK  + D  +K+L EM  +    +  TYN LIA  C+ G   EA   +  ME  G+
Sbjct: 229 LEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGL 288

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDIKGAT--PNHVTYTTLIDGYCRANDLEEALR 324
            PD  TY +LI+G C+  R  EA+ L  ++  A   PN V Y  LIDG+ R  + +EA +
Sbjct: 289 VPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFK 348

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           + + M A GV P  +TY++++R LCK G++  A+ LL +M      PD +T N +I  + 
Sbjct: 349 MIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHF 408

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           +      A ++ + M  AG+  + +TY  +IHG C++ E + A +LL  M   G  P+  
Sbjct: 409 RHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAF 468

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
            Y+ L+ GYC + N     ++ D+     +  D+  Y +LI    K  +V+ + + F  M
Sbjct: 469 VYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQM 528

Query: 505 QGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
           Q  G+L +   Y+ L + Y + G+ ++   ++  M    L     IY     SY K ++I
Sbjct: 529 QERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDI 588

Query: 565 --LDLFWSHVVDRGLM 578
             +   +  ++D+G+M
Sbjct: 589 EKVSSTFKSMLDQGVM 604



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 126/440 (28%), Positives = 201/440 (45%), Gaps = 39/440 (8%)

Query: 126 PDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVW 185
           PDG ++    L+      + + +   + D+M    L P++     L++   ++   D  +
Sbjct: 290 PDGFTY--GALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAF 347

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
           K+ K+MV  GV  N   Y+ L+   CK   +D+   LL +M     R D  TYN +I  +
Sbjct: 348 KMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGH 407

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNH 303
            +     +A  +   ME  GISP++ TY+ +IHG C+ G   +A  L  ++  KG  PN 
Sbjct: 408 FRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNA 467

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
             Y  LI GYCR  ++  A  + + M    V P +  YNS++  L K GR+ ++ +   +
Sbjct: 468 FVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQ 527

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGL------------------- 404
           M E+ + P+  T + LI+ Y K GD  SA ++  RML+ GL                   
Sbjct: 528 MQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDD 587

Query: 405 ----------------MLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
                           MLD   Y  LIH    +  M+ A  +L G+   G  P    YS 
Sbjct: 588 IEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSS 647

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG 508
           L+ G C   + E    +LDE   +G+  ++  Y ALI   CK   + YA+ +FN +   G
Sbjct: 648 LISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKG 707

Query: 509 ILGDSVIYTSLAYAYWRAGE 528
           ++ + V YTSL     + G+
Sbjct: 708 LVPNCVTYTSLIDGSCKVGD 727



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 111/411 (27%), Positives = 201/411 (48%), Gaps = 2/411 (0%)

Query: 156 MRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSD 215
           M  + L+P       L+N L K R ++    +  +M    +  N+ +Y  LI    +  +
Sbjct: 283 MEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGN 342

Query: 216 VDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNS 275
            D+  K++ EM    V+ +  TY+ L+   CK G    A  +  +M R+   PD +TYN 
Sbjct: 343 ADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNL 402

Query: 276 LIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKG 333
           +I G  R    ++A RL  +++  G +PN  TY+ +I G C++ + E+A  L E M  KG
Sbjct: 403 IIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKG 462

Query: 334 VYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAM 393
           + P    Y  ++   C+EG +  A  + ++M +  + PD    N+LI    K+G    + 
Sbjct: 463 LKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEEST 522

Query: 394 KVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGY 453
           K   +M E GL+ ++FTY  LIHG+ K  +++ A++L+  MLD G  P+   Y  L++ Y
Sbjct: 523 KYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESY 582

Query: 454 CNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDS 513
              ++ E +       + +G+ +D  +Y  LI        ++ A R+ + ++ NG + D 
Sbjct: 583 FKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDV 642

Query: 514 VIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
            +Y+SL     +  + +    ILD+M ++ +   +  Y +      K  +I
Sbjct: 643 HVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDI 693



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 106/364 (29%), Positives = 181/364 (49%), Gaps = 10/364 (2%)

Query: 185 WKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIAL 244
           +++  +M   G+  N++ Y+++IH  C+S + +K   LL EM  K ++ + F Y  LI+ 
Sbjct: 417 FRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISG 476

Query: 245 YCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPN 302
           YC++G    A  + D+M +  + PD+  YNSLI G  + GR+ E+ + F  +  +G  PN
Sbjct: 477 YCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPN 536

Query: 303 HVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLN 362
             TY+ LI GY +  DLE A +L + M   G+ P  V Y  +L    K   I   +    
Sbjct: 537 EFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFK 596

Query: 363 EMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAK 422
            M ++ +  DN     LI+     G+  +A +V + + + G + D   Y +LI G CK  
Sbjct: 597 SMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTA 656

Query: 423 EMDIAKELLFGMLDA----GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDV 478
           +    +E  FG+LD     G  P+   Y+ L+DG C   +      + +  +++GL  + 
Sbjct: 657 D----REKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNC 712

Query: 479 SVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDD 538
             Y +LI   CK   +  A  L+N M   GI  D+ +Y+ L      AG+ +    ++++
Sbjct: 713 VTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEE 772

Query: 539 MYRR 542
           M+ R
Sbjct: 773 MFLR 776



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 126/464 (27%), Positives = 215/464 (46%), Gaps = 22/464 (4%)

Query: 80  SHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIF 139
           ++  MIH L ++   + A ++LE++  +                     N+ V + L+  
Sbjct: 434 TYSIMIHGLCQSGEPEKASDLLEEMTTKGL-----------------KPNAFVYAPLISG 476

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
           Y          ++FD+M   N++P L+    L+  L+K    +   K + +M + G++ N
Sbjct: 477 YCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPN 536

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
              Y+ LIH   K+ D++  E+L+  M    ++ +   Y  L+  Y K     +  +   
Sbjct: 537 EFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFK 596

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRAN 317
            M  +G+  D   Y  LIH     G M  A R+   I+  G+ P+   Y++LI G C+  
Sbjct: 597 SMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTA 656

Query: 318 DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCN 377
           D E+A  + + M+ KGV P +V YN+++  LCK G I  A  + N +  K + P+ VT  
Sbjct: 657 DREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYT 716

Query: 378 TLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA 437
           +LI+  CK+GD ++A  + N ML  G+  D F Y  L  G   A +++ A  L+  M   
Sbjct: 717 SLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLR 776

Query: 438 GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYA 497
           G + S  S++ LVDG+C +   +  LKLL   + RGL  +      +I    +  K+   
Sbjct: 777 GHA-SISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEV 835

Query: 498 QRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
             +F  +Q       +  ++SL       G  K   D++DDM R
Sbjct: 836 HTIFVELQQKTSESAARHFSSLFMDMINQG--KIPLDVVDDMIR 877



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 113/382 (29%), Positives = 177/382 (46%), Gaps = 2/382 (0%)

Query: 172 LNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDV 231
           L +  K R  D   KV  +M + G   N   YNVLI   C+S  V++      +ME   +
Sbjct: 229 LEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGL 288

Query: 232 RADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARR 291
             D FTY  LI   CK     EA A+ D M    + P++V Y +LI GF REG   EA +
Sbjct: 289 VPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFK 348

Query: 292 LFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLC 349
           + +++   G  PN +TY  L+ G C+   ++ A  L + M      P  +TYN I+    
Sbjct: 349 MIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHF 408

Query: 350 KEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQF 409
           +    +DA RLL+EM    I+P+  T + +I+  C+ G+   A  +   M   GL  + F
Sbjct: 409 RHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAF 468

Query: 410 TYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEF 469
            Y  LI G+C+   + +A E+   M      P    Y+ L+ G       E   K   + 
Sbjct: 469 VYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQM 528

Query: 470 VSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEP 529
             RGL  +   Y  LI  + K   ++ A++L   M   G+  + VIY  L  +Y+++ + 
Sbjct: 529 QERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDI 588

Query: 530 KACSDILDDMYRRRLMITLKIY 551
           +  S     M  + +M+  +IY
Sbjct: 589 EKVSSTFKSMLDQGVMLDNRIY 610



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 75/276 (27%), Positives = 120/276 (43%), Gaps = 41/276 (14%)

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
           R  E  AA+G       + S L   CK      A ++L EM E+    + VT N LI   
Sbjct: 214 RAVEGSAARG------RHGSALEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGL 267

Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY 443
           C+ G    A   K  M + GL+ D FTY ALI+G CK++  + AK LL  M  A   P+ 
Sbjct: 268 CRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNV 327

Query: 444 CSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQ----- 498
             Y+ L+DG+  + N +   K++ E V+ G+  +   Y  L+R  CK  ++D A      
Sbjct: 328 VVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQ 387

Query: 499 ------------------------------RLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
                                         RL + M+  GI  +   Y+ + +   ++GE
Sbjct: 388 MVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGE 447

Query: 529 PKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
           P+  SD+L++M  + L     +Y    + Y ++  +
Sbjct: 448 PEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNV 483



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 58/236 (24%), Positives = 117/236 (49%), Gaps = 21/236 (8%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           VF+ +    L+P+    T L++   K       + +Y +M+  G+  +  +Y+VL   C 
Sbjct: 699 VFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCS 758

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
            + D+++   L+ EM F    A + ++N L+  +CK+G   E L +   +   G+ P+ +
Sbjct: 759 SAGDLEQAMFLIEEM-FLRGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNAL 817

Query: 272 TYNSLIHGFCREGRMREARRLFRDIKGATPNHVT--YTTL------------------ID 311
           T  ++I G    G++ E   +F +++  T       +++L                  I 
Sbjct: 818 TIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIR 877

Query: 312 GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEK 367
            +C+  +L++AL LR+V+ AK    G  +Y +I+  LC++G++ +A  LL EM+++
Sbjct: 878 DHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKR 933


>gi|449487696|ref|XP_004157755.1| PREDICTED: uncharacterized protein LOC101223774 [Cucumis sativus]
          Length = 1315

 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 114/377 (30%), Positives = 197/377 (52%), Gaps = 3/377 (0%)

Query: 169  TVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEF 228
            T+++ +  +  L +     + K+ ++G+  N+  Y+ +I   CK   V +  +LL EM  
Sbjct: 870  TLIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVK 929

Query: 229  KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER-EGISPDIVTYNSLIHGFCREGRMR 287
               + +++T+ +LI   CKKG    A  +  ++ R +   P++ TY ++I G+C+E ++ 
Sbjct: 930  NGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLS 989

Query: 288  EARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSIL 345
             A  LF  +K  G  PN  TYTTLIDG+C+A +  +A  L E+M+ +G +P   TYNSI+
Sbjct: 990  RAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIV 1049

Query: 346  RKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLM 405
              LCK GR  +A +LLN   + +I  D VT   LI+  CK  D   A+   N+M + G  
Sbjct: 1050 DGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQ 1109

Query: 406  LDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKL 465
             D   Y  LI  FC+   M  +++L   ++  G +P+  +Y+ ++ GYC +      +K 
Sbjct: 1110 PDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKF 1169

Query: 466  LDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWR 525
              +    G   D   Y ALI   CK+ ++D A++L++ M   G+    V   +L Y Y +
Sbjct: 1170 FQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRVTLTYEYCK 1229

Query: 526  AGEPKACSDILDDMYRR 542
              +  +   IL+ + ++
Sbjct: 1230 TEDFASAMVILERLNKK 1246



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 113/452 (25%), Positives = 197/452 (43%), Gaps = 38/452 (8%)

Query: 131  HVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKK 190
             V+  +V  +A +   ++ + +   MR   L+        ++   A+ RL +    V+ +
Sbjct: 762  EVVECMVGVFAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDE 821

Query: 191  MVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGM 250
            M   GV  +   Y  +I   C++ +V + ++ +CEM  +    D  T   +I  +C+K +
Sbjct: 822  MSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSL 881

Query: 251  HYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI-------------- 296
               A+    ++ + G+SP+++ Y+S+I G C+ G +++A  L  ++              
Sbjct: 882  VNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTS 941

Query: 297  -------KGAT-----------------PNHVTYTTLIDGYCRANDLEEALRLREVMAAK 332
                   KG T                 PN  TYT +I GYC+   L  A  L E M  +
Sbjct: 942  LIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQ 1001

Query: 333  GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
            G+ P   TY +++   CK G    A  L+  M+ +   P+  T N++++  CK G    A
Sbjct: 1002 GLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEA 1061

Query: 393  MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
             K+ N   +  +  D  TY  LI   CK  +M+ A   L  M   GF P    Y+ L+  
Sbjct: 1062 FKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAA 1121

Query: 453  YCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGD 512
            +C +N  +   KL DE +  GL      Y ++I  +C+++KV  A + F  M  +G   D
Sbjct: 1122 FCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPD 1181

Query: 513  SVIYTSLAYAYWRAGEPKACSDILDDMYRRRL 544
            S+ Y +L     +         + D M  + L
Sbjct: 1182 SISYGALISGLCKESRLDEARQLYDTMIDKGL 1213



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 113/378 (29%), Positives = 173/378 (45%), Gaps = 5/378 (1%)

Query: 191  MVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGM 250
            M   G+V    + N +I    +   V+    +  EM  + V  D  TY  +I  YC+ G 
Sbjct: 787  MRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPDSCTYKYIIVGYCRNGN 846

Query: 251  HYEALA-VQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYT 307
              EA   + + MER G   D  T   +I  FC +  +  A   F  +   G +PN + Y+
Sbjct: 847  VLEADRWICEMMER-GFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYS 905

Query: 308  TLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRL-LNEMNE 366
            ++I G C+   +++A  L E M   G  P V T+ S++  LCK+G    A RL L  +  
Sbjct: 906  SMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRS 965

Query: 367  KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
                P+  T   +I+ YCK    + A  +  RM E GL+ +  TY  LI G CKA     
Sbjct: 966  DNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSK 1025

Query: 427  AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
            A EL+  M + GF P+ C+Y+ +VDG C +   E   KLL+      +  D   Y  LI 
Sbjct: 1026 AYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILIS 1085

Query: 487  RFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMI 546
              CK+  ++ A    N M   G   D  +YT+L  A+ R    K    + D++ +  L  
Sbjct: 1086 EQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAP 1145

Query: 547  TLKIYRSFSASYAKDNEI 564
            T + Y S    Y ++ ++
Sbjct: 1146 TKETYTSMICGYCREKKV 1163



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 117/414 (28%), Positives = 201/414 (48%), Gaps = 23/414 (5%)

Query: 64   FKWAESAVPN-YKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKI 122
            F+  E  V N +K ++ +H ++IH L K       +   E+ A R FL        L++ 
Sbjct: 921  FELLEEMVKNGWKPNVYTHTSLIHGLCK-------KGWTER-AFRLFLK-------LIR- 964

Query: 123  HDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTD 182
             D+   N H  + ++  Y   +       +F++M+   L+P+ +  T L++   K     
Sbjct: 965  SDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFS 1024

Query: 183  MVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLI 242
              +++ + M   G   N   YN ++   CK    ++  KLL       + AD  TY  LI
Sbjct: 1025 KAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILI 1084

Query: 243  ALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGAT 300
            +  CK+    +AL   ++M + G  PDI  Y +LI  FCR+  M+++ +LF ++   G  
Sbjct: 1085 SEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLA 1144

Query: 301  PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRL 360
            P   TYT++I GYCR   +  A++  + M+  G  P  ++Y +++  LCKE R+ +A +L
Sbjct: 1145 PTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQL 1204

Query: 361  LNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCK 420
             + M +K ++P  VT  TL   YCK  D ASAM +  R L   L +   T   LI   C 
Sbjct: 1205 YDTMIDKGLSPCEVTRVTLTYEYCKTEDFASAMVILER-LNKKLWIR--TVHTLIRKLCC 1261

Query: 421  AKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGL 474
             K++ +A      +LD   +    + +   +  C ++N+ AL+  L E +S+G+
Sbjct: 1262 EKKVALAALFFHKLLDKEVNVDRVTLAAF-NTACIESNKYALVSDLSERISKGI 1314



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 88/336 (26%), Positives = 162/336 (48%), Gaps = 6/336 (1%)

Query: 257  VQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYC 314
            V D M   G+ PD  TY  +I G+CR G + EA R   ++  +G   ++ T T +I  +C
Sbjct: 818  VFDEMSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFC 877

Query: 315  RANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNV 374
              + +  A+     +   G+ P ++ Y+S++  LCK G ++ A  LL EM +    P+  
Sbjct: 878  EKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVY 937

Query: 375  TCNTLINAYCKIGDTASAMKVKNRMLEA-GLMLDQFTYKALIHGFCKAKEMDIAKELLFG 433
            T  +LI+  CK G T  A ++  +++ +     +  TY A+I G+CK +++  A+ L   
Sbjct: 938  THTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFER 997

Query: 434  MLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEK 493
            M + G  P+  +Y+ L+DG+C   N     +L++   + G   +   Y +++   CK+ +
Sbjct: 998  MKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGR 1057

Query: 494  VDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRS 553
             + A +L N    N I  D V YT L     +  +       L+ M++      + +Y +
Sbjct: 1058 AEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTT 1117

Query: 554  FSASYAKDNEILDL--FWSHVVDRGLM-SKHIFKEM 586
              A++ + N + D    +  V+  GL  +K  +  M
Sbjct: 1118 LIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSM 1153



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 60/261 (22%), Positives = 112/261 (42%), Gaps = 36/261 (13%)

Query: 303  HVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLN 362
            H     ++  +     L+EA+ +   M  +G+       N I+    +   +  A  + +
Sbjct: 761  HEVVECMVGVFAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFD 820

Query: 363  EMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAK 422
            EM+ + + PD+ T   +I  YC+ G+   A +    M+E G ++D  T   +I  FC+  
Sbjct: 821  EMSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKS 880

Query: 423  EMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSR---------- 472
             ++ A      +   G SP+  +YS ++ G C + + +   +LL+E V            
Sbjct: 881  LVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHT 940

Query: 473  ----GLC----------------------VDVSVYRALIRRFCKKEKVDYAQRLFNLMQG 506
                GLC                       +V  Y A+I  +CK+EK+  A+ LF  M+ 
Sbjct: 941  SLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKE 1000

Query: 507  NGILGDSVIYTSLAYAYWRAG 527
             G++ ++  YT+L   + +AG
Sbjct: 1001 QGLVPNTNTYTTLIDGHCKAG 1021


>gi|255566084|ref|XP_002524030.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536757|gb|EEF38398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1016

 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 122/439 (27%), Positives = 222/439 (50%), Gaps = 23/439 (5%)

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           LV  +  + + + G ++ D +        +     L++   K     +   + ++M + G
Sbjct: 118 LVKGFCRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEG 177

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEME----FKD-----------------VRAD 234
           ++++I  YN LI+  CK  + DK + LL E+      KD                 + AD
Sbjct: 178 LLSDIVSYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEAD 237

Query: 235 LFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR 294
           L TY T+I+ YCK+    EA A+ + M   G  PD+VTY+S+++G C++GR+ EA+ L R
Sbjct: 238 LITYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLR 297

Query: 295 DIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEG 352
           ++K  G  PNHV YTTLID   +A    EA   +  +  +G+   +V   +++  L K  
Sbjct: 298 EMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSS 357

Query: 353 RIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYK 412
           + ++A  +   +++  + P+++T   LI+ YCK+GD      +   M E  +  +  TY 
Sbjct: 358 KPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYS 417

Query: 413 ALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSR 472
           ++I+G+ K   +D A  ++  MLD    P+   Y+ L+DGYC    +E    L +E    
Sbjct: 418 SIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLS 477

Query: 473 GLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKAC 532
           GL V+  ++  L+    + +++D A+ L   +   G+L D V YTSL   +++AG+  A 
Sbjct: 478 GLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAA 537

Query: 533 SDILDDMYRRRLMITLKIY 551
            +++++M  + +   +  Y
Sbjct: 538 LNMVEEMTEKSIPFDVVTY 556



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 122/457 (26%), Positives = 217/457 (47%), Gaps = 40/457 (8%)

Query: 160 NLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKV 219
           NL   L   T ++++  K    +    +Y++M+  G + ++  Y+ +++  CK   + + 
Sbjct: 233 NLEADLITYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEA 292

Query: 220 EKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHG 279
           ++LL EM+   V  +   Y TLI    K G  +EA A Q ++   G++ D+V   +L+ G
Sbjct: 293 QELLREMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDG 352

Query: 280 FCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPG 337
             +  + +EA  +FR +      PN +TYT LIDGYC+  D+E    L + M  K + P 
Sbjct: 353 LFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPN 412

Query: 338 VVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKN 397
           V+TY+SI+    K+G + +A  ++ +M ++ I P+      LI+ YCK G    A  + N
Sbjct: 413 VITYSSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYN 472

Query: 398 RMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKN 457
            M  +GL ++   +  L++   + K MD A+ELL  +   G    + +Y+ L+DG+    
Sbjct: 473 EMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAG 532

Query: 458 NEEALLKLLDEFVSRGLCVDVSVYRAL--------------------------------- 484
            E A L +++E   + +  DV  Y  L                                 
Sbjct: 533 KESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGKYEAKSVYSGMIEMGLAPNQATYNI 592

Query: 485 -IRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRR 543
            I+ +CK+ ++D A  L+N M+ + I+  S+   +L      AGE +   ++L++M    
Sbjct: 593 MIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSVMG 652

Query: 544 LMITLKIYRSF---SASYAKDNEILDLFWSHVVDRGL 577
           +   L I+R     S+   K N +L +    +VD GL
Sbjct: 653 IHPNLVIHRVLLNASSKSGKANAVLQMH-EQLVDMGL 688



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 121/434 (27%), Positives = 204/434 (47%), Gaps = 27/434 (6%)

Query: 156 MRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSD 215
           MR HN++P L     L+       L   V  +Y +M+   V  N++ +NVL+HA CK  +
Sbjct: 1   MRKHNIVPTLLLWNQLIYHFNAFGLVSQVCDIYTEMLCSAVPPNVYTHNVLVHAWCKMGN 60

Query: 216 VDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNS 275
           +     LL  +   DV  D  TYNT+I  +C+ G+  +A      M ++    D +T N 
Sbjct: 61  LILALDLLRNV---DVEVDTVTYNTVIWGFCQHGLVNQAFGFLSIMVKKDTCFDTITCNI 117

Query: 276 LIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKG 333
           L+ GFCR G  +   R+  ++   G   + + + TLIDGYC+A ++  AL L E M  +G
Sbjct: 118 LVKGFCRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEG 177

Query: 334 VYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNV------------------- 374
           +   +V+YN+++   CK G    A  LL+E++E +   D+V                   
Sbjct: 178 LLSDIVSYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEAD 237

Query: 375 --TCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLF 432
             T  T+I+ YCK      A  +   M+  G + D  TY ++++G CK   +  A+ELL 
Sbjct: 238 LITYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLR 297

Query: 433 GMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKE 492
            M   G  P++ +Y+ L+D      +         + V RG+ +D+ +   L+    K  
Sbjct: 298 EMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSS 357

Query: 493 KVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYR 552
           K   A+ +F  +    ++ +S+ YT+L   Y + G+ +    +L +M  + +   +  Y 
Sbjct: 358 KPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYS 417

Query: 553 SFSASYAKDNEILD 566
           S    Y K   ILD
Sbjct: 418 SIINGYTKKG-ILD 430



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 113/404 (27%), Positives = 197/404 (48%), Gaps = 25/404 (6%)

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER 263
           N+L+   C+       E+++  +       D+  +NTLI  YCK G    AL + +RM +
Sbjct: 116 NILVKGFCRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRK 175

Query: 264 EGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGA-----------------------T 300
           EG+  DIV+YN+LI+GFC+ G   +A+ L  +I  +                        
Sbjct: 176 EGLLSDIVSYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLE 235

Query: 301 PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRL 360
            + +TYTT+I  YC+ + LEEA  L E M   G  P VVTY+SI+  LCK+GR+ +A  L
Sbjct: 236 ADLITYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQEL 295

Query: 361 LNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCK 420
           L EM +  + P++V   TLI++  K G    A   +++++  G+ LD      L+ G  K
Sbjct: 296 LREMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFK 355

Query: 421 AKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSV 480
           + +   A+++   +      P+  +Y+ L+DGYC   + E +  LL E   + +  +V  
Sbjct: 356 SSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVIT 415

Query: 481 YRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMY 540
           Y ++I  + KK  +D A  +   M    I+ ++ +Y  L   Y +AG+ +  +D+ ++M 
Sbjct: 416 YSSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMK 475

Query: 541 RRRLMITLKIYRSFSASYAKDNEI--LDLFWSHVVDRGLMSKHI 582
              L +   ++     +  +   +   +     V  RGL+  H+
Sbjct: 476 LSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHV 519



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 119/484 (24%), Positives = 226/484 (46%), Gaps = 17/484 (3%)

Query: 108 DFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHA 167
           D     S+L  + + H +P  N    S ++  Y    +  + + V  +M   N++P+ + 
Sbjct: 393 DMERVESLLQEMEEKHINP--NVITYSSIINGYTKKGILDEAINVMKKMLDQNIIPNAYV 450

Query: 168 CTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEME 227
             +L++   K    ++   +Y +M   G+  N  L++VL++   +   +D+ E+LL ++ 
Sbjct: 451 YAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVT 510

Query: 228 FKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMR 287
            + +  D   Y +L+  + K G    AL + + M  + I  D+VTYN LI+G    G+  
Sbjct: 511 SRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGKY- 569

Query: 288 EARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSIL 345
           EA+ ++  +   G  PN  TY  +I  YC+  +L+ AL L   M +  + P  +T N+++
Sbjct: 570 EAKSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLV 629

Query: 346 RKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLM 405
             L + G I  A  +LNEM+   I P+ V    L+NA  K G   + +++  ++++ GL 
Sbjct: 630 VGLSEAGEIEKAMNVLNEMSVMGIHPNLVIHRVLLNASSKSGKANAVLQMHEQLVDMGLK 689

Query: 406 LDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKL 465
           ++Q  Y  LI  FC+ +    A  +L  M+  GF     +Y+ L+ GYC  ++ +  L  
Sbjct: 690 INQEAYNNLIVVFCRLRMTKKATSVLKYMIRDGFVADTVTYNALIRGYCESSHVKKALAT 749

Query: 466 LDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWR 525
             + ++ G+  ++  Y  L+        +     LF+ M+ NG+  D+  Y +L   Y +
Sbjct: 750 YTQMLNEGVSPNIVTYNLLLGGLLGAGLMAERDELFDKMKENGLNPDASTYDTLISGYGK 809

Query: 526 AGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKE 585
            G  K    +  +M  +  +     Y    + +AK            V +   ++ +  E
Sbjct: 810 IGNKKESIRLYCEMVAQGFVPKTSTYNVLISDFAK------------VGKMDQARELLNE 857

Query: 586 MQLR 589
           MQ+R
Sbjct: 858 MQVR 861



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 147/308 (47%), Gaps = 41/308 (13%)

Query: 187 VYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYC 246
           VY  M+++G+  N   YN++I A CK  ++D   +L  EM+   +     T NTL+    
Sbjct: 574 VYSGMIEMGLAPNQATYNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLS 633

Query: 247 KKGMHYEALAVQDRMEREGISPDIV----------------------------------- 271
           + G   +A+ V + M   GI P++V                                   
Sbjct: 634 EAGEIEKAMNVLNEMSVMGIHPNLVIHRVLLNASSKSGKANAVLQMHEQLVDMGLKINQE 693

Query: 272 TYNSLIHGFCREGRMREA----RRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLRE 327
            YN+LI  FCR    ++A    + + RD  G   + VTY  LI GYC ++ +++AL    
Sbjct: 694 AYNNLIVVFCRLRMTKKATSVLKYMIRD--GFVADTVTYNALIRGYCESSHVKKALATYT 751

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
            M  +GV P +VTYN +L  L   G + + + L ++M E  + PD  T +TLI+ Y KIG
Sbjct: 752 QMLNEGVSPNIVTYNLLLGGLLGAGLMAERDELFDKMKENGLNPDASTYDTLISGYGKIG 811

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
           +   ++++   M+  G +    TY  LI  F K  +MD A+ELL  M   G  PS  +Y 
Sbjct: 812 NKKESIRLYCEMVAQGFVPKTSTYNVLISDFAKVGKMDQARELLNEMQVRGVPPSSSTYD 871

Query: 448 WLVDGYCN 455
            L+ G+CN
Sbjct: 872 ILICGWCN 879



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 90/343 (26%), Positives = 153/343 (44%), Gaps = 30/343 (8%)

Query: 261 MEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRAND 318
           M +  I P ++ +N LI+ F   G + +   ++ ++      PN  T+  L+  +C+  +
Sbjct: 1   MRKHNIVPTLLLWNQLIYHFNAFGLVSQVCDIYTEMLCSAVPPNVYTHNVLVHAWCKMGN 60

Query: 319 LEEALRL-REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCN 377
           L  AL L R V     V    VTYN+++   C+ G +  A   L+ M +K    D +TCN
Sbjct: 61  LILALDLLRNV----DVEVDTVTYNTVIWGFCQHGLVNQAFGFLSIMVKKDTCFDTITCN 116

Query: 378 TLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA 437
            L+  +C+IG      ++ + ++  G   D   +  LI G+CKA EM +A +L+  M   
Sbjct: 117 ILVKGFCRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKE 176

Query: 438 GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFV-SRG--------------------LCV 476
           G      SY+ L++G+C +   +    LL E   SRG                    L  
Sbjct: 177 GLLSDIVSYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEA 236

Query: 477 DVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDIL 536
           D+  Y  +I  +CK+  ++ A+ L+  M  NG L D V Y+S+     + G      ++L
Sbjct: 237 DLITYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELL 296

Query: 537 DDMYRRRLMITLKIYRSFSASYAKDNEILDLF--WSHVVDRGL 577
            +M +  +      Y +   S  K     + F   S +V RG+
Sbjct: 297 REMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGM 339



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 69/158 (43%), Gaps = 12/158 (7%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           ++FD+M+ + L P       L++   K        ++Y +MV  G V     YNVLI   
Sbjct: 783 ELFDKMKENGLNPDASTYDTLISGYGKIGNKKESIRLYCEMVAQGFVPKTSTYNVLISDF 842

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYC------------KKGMHYEALAVQ 258
            K   +D+  +LL EM+ + V     TY+ LI  +C            KK    +A  + 
Sbjct: 843 AKVGKMDQARELLNEMQVRGVPPSSSTYDILICGWCNLSKHPDLDRTLKKIYRTDAKNLI 902

Query: 259 DRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI 296
             M  +G  P   T   +   F R G+M +A +L ++I
Sbjct: 903 TEMNDKGFVPCKSTIACISSTFARPGKMLDAEKLLKEI 940


>gi|334183628|ref|NP_001185309.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
 gi|193806276|sp|P0C7R3.1|PP106_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g64583, mitochondrial; Flags: Precursor
 gi|332196135|gb|AEE34256.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
          Length = 512

 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 123/420 (29%), Positives = 205/420 (48%), Gaps = 2/420 (0%)

Query: 122 IHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLT 181
           +H  P  +    + L+   ANL+  +  +    +M ++ +   L++ T+L++   +    
Sbjct: 63  VHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRL 122

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
                V  KM++LG   +I  +  L+H  C  + +     L+  M       ++  YNTL
Sbjct: 123 SFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTL 182

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGA 299
           I   CK G    AL + + ME++G+  D+VTYN+L+ G C  GR  +A R+ RD+  +  
Sbjct: 183 IDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSI 242

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
            P+ VT+T LID + +  +L+EA  L + M    V P  VTYNSI+  LC  GR+ DA +
Sbjct: 243 NPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKK 302

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
             + M  K   P+ VT NTLI+ +CK       MK+  RM   G   D FTY  LIHG+C
Sbjct: 303 TFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYC 362

Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
           +  ++ +A ++   M+    +P   ++  L+ G C     E+ L   D+       + + 
Sbjct: 363 QVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIV 422

Query: 480 VYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
            Y  +I   CK +KV+ A  LF  +   G+  D+  YT +     + G  +   +++  M
Sbjct: 423 AYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRM 482



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 95/289 (32%), Positives = 143/289 (49%), Gaps = 2/289 (0%)

Query: 258 QDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCR 315
             +ME  GIS D+ ++  LIH FCR  R+  A  +   +   G  P+ VT+ +L+ G+C 
Sbjct: 94  SQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCL 153

Query: 316 ANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVT 375
            N + +A  L  +M   G  P VV YN+++  LCK G +  A  LLNEM +K +  D VT
Sbjct: 154 VNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVT 213

Query: 376 CNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGML 435
            NTL+   C  G  + A ++   M++  +  D  T+ ALI  F K   +D A+EL   M+
Sbjct: 214 YNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMI 273

Query: 436 DAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVD 495
            +   P+  +Y+ +++G C         K  D   S+G   +V  Y  LI  FCK   VD
Sbjct: 274 QSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVD 333

Query: 496 YAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL 544
              +LF  M   G   D   Y +L + Y + G+ +   DI   M  RR+
Sbjct: 334 EGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRV 382



 Score = 85.1 bits (209), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 56/228 (24%), Positives = 97/228 (42%)

Query: 312 GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAP 371
           G+  +   E+A  L   M      P +V +  +L       R         +M    I+ 
Sbjct: 45  GFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISH 104

Query: 372 DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
           D  +   LI+ +C+    + A+ V  +M++ G      T+ +L+HGFC    +  A  L+
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164

Query: 432 FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
             M+ +G+ P+   Y+ L+DG C        L+LL+E   +GL  DV  Y  L+   C  
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224

Query: 492 EKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
            +   A R+   M    I  D V +T+L   + + G      ++  +M
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEM 272



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 84/192 (43%)

Query: 353 RIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYK 412
           R  DA  L  EM   +  P  V    L+ A   +    + +    +M   G+  D +++ 
Sbjct: 51  RFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFT 110

Query: 413 ALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSR 472
            LIH FC+   +  A  +L  M+  G+ PS  ++  L+ G+C  N       L+   V  
Sbjct: 111 ILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKS 170

Query: 473 GLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKAC 532
           G   +V VY  LI   CK  +++ A  L N M+  G+  D V Y +L      +G     
Sbjct: 171 GYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDA 230

Query: 533 SDILDDMYRRRL 544
           + +L DM +R +
Sbjct: 231 ARMLRDMMKRSI 242


>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900 [Vitis vinifera]
          Length = 900

 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 126/429 (29%), Positives = 207/429 (48%), Gaps = 37/429 (8%)

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           LV+    ++  + G ++ ++M     +P   A + L++ L K       + +  K+ + G
Sbjct: 291 LVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFG 350

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
           V  ++ +YN LI++ CK   +D+ E L   M  K +  +  TY+ LI  +CK+G    AL
Sbjct: 351 VAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVAL 410

Query: 256 AVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGY 313
               +M   GI   +  Y+SLI G C+ G++R A+ LF ++   G  PN V YT+LI GY
Sbjct: 411 HFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGY 470

Query: 314 CRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDN 373
           C+  +L  A RL   M  KG+ P   T+ +++  LC   R+ +AN+L  EM E  + P+ 
Sbjct: 471 CKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNE 530

Query: 374 VTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYK--------------------- 412
           VT N LI  +CK G+T  A ++ + M+E GL+ D +TY+                     
Sbjct: 531 VTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMND 590

Query: 413 --------------ALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNN 458
                         AL+HG+CK   +D A +    ML  G +     YS L+ G   + +
Sbjct: 591 LQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQD 650

Query: 459 EEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTS 518
             +++ LL +   +GL  D  +Y  +I    K   +  A  L+++M   G L + V YT+
Sbjct: 651 RRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTA 710

Query: 519 LAYAYWRAG 527
           L     + G
Sbjct: 711 LINGLCKIG 719



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 134/494 (27%), Positives = 234/494 (47%), Gaps = 45/494 (9%)

Query: 130 SHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYK 189
           S VL+ L+     ++  +  L +FD++    L P ++  T ++ SL + +      +V  
Sbjct: 184 SGVLNGLI----RIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIG 239

Query: 190 KMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCK-- 247
           +M   G   ++  YNV I   CK+  V +  ++   + +K +RAD+ TY TL+   CK  
Sbjct: 240 RMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVE 299

Query: 248 ---------------------------------KGMHYEALAVQDRMEREGISPDIVTYN 274
                                            KG    A  + +++++ G++P +  YN
Sbjct: 300 EFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYN 359

Query: 275 SLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAK 332
           +LI+  C++G++ EA  LF ++  KG  PN VTY+ LID +C+   L+ AL     M   
Sbjct: 360 ALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEV 419

Query: 333 GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
           G+   V  Y+S++   CK G++R A  L +EM    + P+ V   +LI+ YCK G+  +A
Sbjct: 420 GIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNA 479

Query: 393 MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
            ++ + M   G+  + +T+ ALI G C A  M  A +L   M++    P+  +Y+ L++G
Sbjct: 480 FRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEG 539

Query: 453 YCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGD 512
           +C + N     +LLDE V +GL  D   YR LI   C   +V  A+   N +QG     +
Sbjct: 540 HCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLN 599

Query: 513 SVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNE---ILDLFW 569
            + +++L + Y + G      D   +M  R + + L  Y        +  +   I+DL  
Sbjct: 600 EMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLL- 658

Query: 570 SHVVDRGLMSKHIF 583
             + D+GL   ++ 
Sbjct: 659 KQMHDQGLRPDNVL 672



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 132/560 (23%), Positives = 252/560 (45%), Gaps = 26/560 (4%)

Query: 8   NSDTKFIKTISAIMLKGH-WAKLLNPN-IASSLTSTAIHKVLLNLYNCCHIPSLSCAFFK 65
           + D++F+  ++ I+     W   LN + I+ +L    + KVL+   +      L+  FF 
Sbjct: 25  SPDSQFVACLTDIVRGNQSWRVALNNSFISQTLKPHHVEKVLIQTLD---DSRLALRFFN 81

Query: 66  WAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIA---------LRDFLSTPSVL 116
           +      N+ HS  S   +IH L ++  +  A ++L+ +             FL +    
Sbjct: 82  FL-GLHKNFDHSTTSFCILIHALVQSNLYWPASSLLQTLLLRGLNPEGLFESFLDSYRKC 140

Query: 117 NALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLA 176
           N    +  D          L+  Y   +   DGL V   M    ++P +   + +LN L 
Sbjct: 141 NFSTTLGFD---------LLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLI 191

Query: 177 KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLF 236
           + R   M   ++ ++V  G+  ++++Y  ++ + C+  D  +  +++  ME       + 
Sbjct: 192 RIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVA 251

Query: 237 TYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI 296
           TYN  I   CK    +EA+ +++ +  +G+  D+ TY +L+ G C+         +  ++
Sbjct: 252 TYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEM 311

Query: 297 K--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRI 354
              G  P+    + L+DG  +  ++  A  L   +   GV P +  YN+++  +CK+G++
Sbjct: 312 IEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKL 371

Query: 355 RDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKAL 414
            +A  L N M  K + P++VT + LI+++CK G    A+    +M E G+    + Y +L
Sbjct: 372 DEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSL 431

Query: 415 IHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGL 474
           I G CK  ++  AK L   M+  G  P+   Y+ L+ GYC +       +L  E   +G+
Sbjct: 432 ISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGI 491

Query: 475 CVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSD 534
             +   + ALI   C   ++  A +LF  M    ++ + V Y  L   + + G      +
Sbjct: 492 SPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFE 551

Query: 535 ILDDMYRRRLMITLKIYRSF 554
           +LD+M  + L+     YR  
Sbjct: 552 LLDEMVEKGLVPDTYTYRPL 571



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 121/411 (29%), Positives = 205/411 (49%), Gaps = 3/411 (0%)

Query: 134 SWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQ 193
           S L+  +  L   +    +FD+M  + L P++   T L++   K+      +++Y +M  
Sbjct: 429 SSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTG 488

Query: 194 LGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYE 253
            G+  N + +  LI   C ++ + +  KL  EM   +V  +  TYN LI  +CK+G    
Sbjct: 489 KGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVR 548

Query: 254 ALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGATP--NHVTYTTLID 311
           A  + D M  +G+ PD  TY  LI G C  GR+ EAR    D++G     N + ++ L+ 
Sbjct: 549 AFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLH 608

Query: 312 GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAP 371
           GYC+   L++AL     M  +GV   +V Y+ ++  + ++   R    LL +M+++ + P
Sbjct: 609 GYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRP 668

Query: 372 DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
           DNV   T+I+A  K G+   A  + + M+  G + +  TY ALI+G CK   MD A+ L 
Sbjct: 669 DNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLC 728

Query: 432 FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
             ML +   P+  +Y+  +D   ++ N E  ++L D  +  G   +   Y  LIR FCK 
Sbjct: 729 REMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLL-EGFLANTVTYNILIRGFCKL 787

Query: 492 EKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRR 542
            ++  A  +   M  +GI  D + Y+++ Y Y R G+ K    + + M  R
Sbjct: 788 GRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNR 838



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 138/559 (24%), Positives = 247/559 (44%), Gaps = 56/559 (10%)

Query: 75  KHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALV-------KIHDDPD 127
           +  + ++ T++  L K + F++ + M+ ++    F+ + + ++ LV        I    D
Sbjct: 282 RADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFD 341

Query: 128 GNSHVLSWLV---IFYANL---KMTQDGL-----QVFDQMRVHNLMPHLHACTVLLNSLA 176
             + V  + V   +F  N     M +DG       +F+ M    L P+    ++L++S  
Sbjct: 342 LVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFC 401

Query: 177 KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLF 236
           K    D+      KM ++G+ A ++ Y+ LI   CK   +   + L  EM    ++ ++ 
Sbjct: 402 KRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVV 461

Query: 237 TYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI 296
            Y +LI+ YCK+G  + A  +   M  +GISP+  T+ +LI G C   RM EA +LF ++
Sbjct: 462 IYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEM 521

Query: 297 K--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRI 354
                 PN VTY  LI+G+C+  +   A  L + M  KG+ P   TY  ++  LC  GR+
Sbjct: 522 VEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRV 581

Query: 355 RDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKAL 414
            +A   +N++  ++   + +  + L++ YCK G    A+     ML  G+ +D   Y  L
Sbjct: 582 SEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVL 641

Query: 415 IHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGL 474
           I+G  + ++     +LL  M D G  P    Y+ ++D      N +    L D  VS G 
Sbjct: 642 IYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGC 701

Query: 475 CVDVSVYRALIRRFCKKEKVDYAQRLFNLM---------------------QGN------ 507
             +V  Y ALI   CK   +D A+ L   M                     +GN      
Sbjct: 702 LPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQ 761

Query: 508 -------GILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAK 560
                  G L ++V Y  L   + + G  +  +++L +M    +      Y +    Y +
Sbjct: 762 LHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCR 821

Query: 561 DNEILDL--FWSHVVDRGL 577
             ++ +    W  +++RG+
Sbjct: 822 RGDLKEAIKLWESMLNRGV 840



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 117/431 (27%), Positives = 201/431 (46%), Gaps = 38/431 (8%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N  + + L+  Y       +  +++ +M    + P+ +  T L++ L          K++
Sbjct: 459 NVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLF 518

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
            +MV+  V+ N   YNVLI   CK  +  +  +LL EM  K +  D +TY  LI+  C  
Sbjct: 519 GEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCST 578

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA------------------- 289
           G   EA    + ++ E    + + +++L+HG+C+EGR+ +A                   
Sbjct: 579 GRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCY 638

Query: 290 ------------RRLFRDI------KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAA 331
                       RR   D+      +G  P++V YTT+ID   +A +L+ A  L ++M +
Sbjct: 639 SVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVS 698

Query: 332 KGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTAS 391
           +G  P VVTY +++  LCK G +  A  L  EM      P+  T    ++     G+   
Sbjct: 699 EGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEK 758

Query: 392 AMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVD 451
           A+++ + +LE G + +  TY  LI GFCK   +  A E+L  M+D+G SP   SYS ++ 
Sbjct: 759 AIQLHDVLLE-GFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIY 817

Query: 452 GYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILG 511
            YC + + +  +KL +  ++RG+  D   Y  LI   C   ++  A  L + M   G+  
Sbjct: 818 EYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKP 877

Query: 512 DSVIYTSLAYA 522
           +   Y SL + 
Sbjct: 878 NRATYNSLIHG 888



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 94/288 (32%), Positives = 151/288 (52%), Gaps = 3/288 (1%)

Query: 169 TVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEF 228
           + LL+   K+   D      ++M+  GV  ++  Y+VLI+   +  D   +  LL +M  
Sbjct: 604 SALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHD 663

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
           + +R D   Y T+I    K G    A  + D M  EG  P++VTY +LI+G C+ G M +
Sbjct: 664 QGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDK 723

Query: 289 ARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILR 346
           A  L R++    + PN  TY   +D      ++E+A++L +V+  +G     VTYN ++R
Sbjct: 724 AELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLL-EGFLANTVTYNILIR 782

Query: 347 KLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLML 406
             CK GRI++A  +L  M +  I+PD ++ +T+I  YC+ GD   A+K+   ML  G+  
Sbjct: 783 GFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNP 842

Query: 407 DQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYC 454
           D   Y  LI+G C   E+  A EL   M+  G  P+  +Y+ L+ G C
Sbjct: 843 DTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTC 890



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 82/266 (30%), Positives = 136/266 (51%), Gaps = 7/266 (2%)

Query: 132 VLSWLVIFYANLKMTQDGLQVFD---QMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           ++ + V+ Y  L+  QD   + D   QM    L P     T ++++ AK     M + ++
Sbjct: 635 LVCYSVLIYGILRQ-QDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLW 693

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
             MV  G + N+  Y  LI+  CK   +DK E L  EM   +   +  TY   +     +
Sbjct: 694 DIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSE 753

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTY 306
           G   +A+ + D +  EG   + VTYN LI GFC+ GR++EA  +  ++   G +P+ ++Y
Sbjct: 754 GNIEKAIQLHDVL-LEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISY 812

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
           +T+I  YCR  DL+EA++L E M  +GV P  V YN ++   C  G +  A  L ++M  
Sbjct: 813 STIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMR 872

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASA 392
           + + P+  T N+LI+  C +   +S 
Sbjct: 873 RGVKPNRATYNSLIHGTCLMSSVSST 898


>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 724

 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 167/630 (26%), Positives = 261/630 (41%), Gaps = 129/630 (20%)

Query: 25  HWAKLLNPNIASSLTSTAIHKVL-LNLYNCCHIP---SLSCAFFKWAESAVPNYKHSLQS 80
            W KLL P    SL ++  HK+    L     +P   S S   F W  S    Y+HS   
Sbjct: 50  EWEKLLKPFDLDSLRNS-FHKITPFQLCKLLELPLDVSTSMELFSWTGSQ-KGYRHSFDV 107

Query: 81  HWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHD---------------- 124
           +  +I  L  N  FK+   +L ++     +   S+  ++++ +D                
Sbjct: 108 YQVLIGKLGSNGEFKTIDRLLMQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMR 167

Query: 125 -----DPDGNSH--VLSWLV----------IFYANLKM---------------------T 146
                +P   S+  VL  LV          +FY  L                        
Sbjct: 168 NVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKALCAVNEV 227

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
              L V   M  H  +P+      L++SL+K    +   ++ ++M  +G V +   +N +
Sbjct: 228 DSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDV 287

Query: 207 IHACCKSSDVDKVEKL----------------------LCEMEFKDVRADLF-------- 236
           I   CK   +++  K+                      LC++   D   DLF        
Sbjct: 288 ILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPTS 347

Query: 237 -TYNTLIALYCKKGMHYEALAV-QDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR 294
             +NTLI  +   G   +A AV  D +   GI PD+ TYNSLI+G+ ++G +  A  + R
Sbjct: 348 VIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLR 407

Query: 295 DI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEG 352
           D+  KG  PN  +YT L+DG+C+   ++EA  L   M+A G+ P  V +N ++   CKE 
Sbjct: 408 DMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEH 467

Query: 353 RIRDANRLLNEMNEKKIAPD-----------------------------------NVTCN 377
           RI +A  +  EM  K   PD                                    VT N
Sbjct: 468 RIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYN 527

Query: 378 TLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA 437
           TLINA+ + G+   A K+ N M+  G +LD+ TY +LI G C+A E+D A+ L   ML  
Sbjct: 528 TLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRD 587

Query: 438 GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYA 497
           G  PS  S + L++G C     E  ++   E V RG   D+  + +LI   C+  +++  
Sbjct: 588 GLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDG 647

Query: 498 QRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
             +F  +Q  GI  D+V Y +L     + G
Sbjct: 648 LTMFRKLQAEGIPPDTVTYNTLMSWLCKGG 677



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 92/304 (30%), Positives = 159/304 (52%), Gaps = 2/304 (0%)

Query: 149 GLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIH 208
            L+V   MR     P++++ T+L++   K    D  + +  +M   G+  N   +N LI 
Sbjct: 402 ALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLIS 461

Query: 209 ACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISP 268
           A CK   + +  ++  EM  K  + D++T+N+LI+  C+      AL +   M  EG+  
Sbjct: 462 AFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVA 521

Query: 269 DIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLR 326
           + VTYN+LI+ F R G ++EAR+L  ++  +G+  + +TY +LI G CRA ++++A  L 
Sbjct: 522 NTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLF 581

Query: 327 EVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKI 386
           E M   G+ P  ++ N ++  LC+ G + +A     EM  +   PD VT N+LIN  C+ 
Sbjct: 582 EKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRA 641

Query: 387 GDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSY 446
           G     + +  ++   G+  D  TY  L+   CK   +  A  LL   ++ GF P+  ++
Sbjct: 642 GRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTW 701

Query: 447 SWLV 450
           S L+
Sbjct: 702 SILL 705



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 86/299 (28%), Positives = 154/299 (51%), Gaps = 2/299 (0%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N +  + LV  +  L    +   + ++M    L P+      L+++  K+       +++
Sbjct: 417 NVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIF 476

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
           ++M + G   +++ +N LI   C+  ++     LL +M  + V A+  TYNTLI  + ++
Sbjct: 477 REMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRR 536

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTY 306
           G   EA  + + M  +G   D +TYNSLI G CR G + +AR LF  +   G  P+ ++ 
Sbjct: 537 GEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISC 596

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
             LI+G CR+  +EEA+  ++ M  +G  P +VT+NS++  LC+ GRI D   +  ++  
Sbjct: 597 NILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQA 656

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMD 425
           + I PD VT NTL++  CK G    A  + +  +E G + +  T+  L+      + +D
Sbjct: 657 EGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWSILLQSLVPQETLD 715



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 106/404 (26%), Positives = 182/404 (45%), Gaps = 8/404 (1%)

Query: 170 VLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEME-F 228
           VL+  L  +     + ++  +M   G+V    L+  ++    K+    +  +L+ EM   
Sbjct: 110 VLIGKLGSNGEFKTIDRLLMQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNV 169

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
                   +YN ++ +      H  A  V   M    I P + T+  ++   C    +  
Sbjct: 170 YSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKALCAVNEVDS 229

Query: 289 ARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILR 346
           A  + RD+   G  PN V Y TLI    + N + EAL+L E M   G  P   T+N ++ 
Sbjct: 230 ALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVIL 289

Query: 347 KLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLML 406
            LCK  RI +A +++N M  +   PD++T   L+N  CKIG   +A  +  R+ +   ++
Sbjct: 290 GLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPTSVI 349

Query: 407 DQFTYKALIHGFCKAKEMDIAKELLFGMLDA-GFSPSYCSYSWLVDGYCNKNNEEALLKL 465
               +  LIHGF     +D AK +L  M+ + G  P  C+Y+ L+ GY  K      L++
Sbjct: 350 ----FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEV 405

Query: 466 LDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWR 525
           L +  ++G   +V  Y  L+  FCK  K+D A  L N M  +G+  ++V +  L  A+ +
Sbjct: 406 LRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCK 465

Query: 526 AGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFW 569
                   +I  +M R+     +  + S  +   + +EI    W
Sbjct: 466 EHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALW 509


>gi|449455469|ref|XP_004145475.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Cucumis sativus]
          Length = 728

 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 114/377 (30%), Positives = 197/377 (52%), Gaps = 3/377 (0%)

Query: 169 TVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEF 228
           T+++ +  +  L +     + K+ ++G+  N+  Y+ +I   CK   V +  +LL EM  
Sbjct: 283 TLIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVK 342

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER-EGISPDIVTYNSLIHGFCREGRMR 287
              + +++T+ +LI   CKKG    A  +  ++ R +   P++ TY ++I G+C+E ++ 
Sbjct: 343 NGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLS 402

Query: 288 EARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSIL 345
            A  LF  +K  G  PN  TYTTLIDG+C+A +  +A  L E+M+ +G +P   TYNSI+
Sbjct: 403 RAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIV 462

Query: 346 RKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLM 405
             LCK GR  +A +LLN   + +I  D VT   LI+  CK  D   A+   N+M + G  
Sbjct: 463 DGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQ 522

Query: 406 LDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKL 465
            D   Y  LI  FC+   M  +++L   ++  G +P+  +Y+ ++ GYC +      +K 
Sbjct: 523 PDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKF 582

Query: 466 LDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWR 525
             +    G   D   Y ALI   CK+ ++D A++L++ M   G+    V   +L Y Y +
Sbjct: 583 FQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRVTLTYEYCK 642

Query: 526 AGEPKACSDILDDMYRR 542
             +  +   IL+ + ++
Sbjct: 643 TEDFASAMVILERLNKK 659



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 113/452 (25%), Positives = 197/452 (43%), Gaps = 38/452 (8%)

Query: 131 HVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKK 190
            V+  +V  +A +   ++ + +   MR   L+        ++   A+ RL +    V+ +
Sbjct: 175 EVVECMVGVFAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDE 234

Query: 191 MVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGM 250
           M   GV  +   Y  +I   C++ +V + ++ +CEM  +    D  T   +I  +C+K +
Sbjct: 235 MSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSL 294

Query: 251 HYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI-------------- 296
              A+    ++ + G+SP+++ Y+S+I G C+ G +++A  L  ++              
Sbjct: 295 VNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTS 354

Query: 297 -------KGAT-----------------PNHVTYTTLIDGYCRANDLEEALRLREVMAAK 332
                  KG T                 PN  TYT +I GYC+   L  A  L E M  +
Sbjct: 355 LIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQ 414

Query: 333 GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
           G+ P   TY +++   CK G    A  L+  M+ +   P+  T N++++  CK G    A
Sbjct: 415 GLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEA 474

Query: 393 MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
            K+ N   +  +  D  TY  LI   CK  +M+ A   L  M   GF P    Y+ L+  
Sbjct: 475 FKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAA 534

Query: 453 YCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGD 512
           +C +N  +   KL DE +  GL      Y ++I  +C+++KV  A + F  M  +G   D
Sbjct: 535 FCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPD 594

Query: 513 SVIYTSLAYAYWRAGEPKACSDILDDMYRRRL 544
           S+ Y +L     +         + D M  + L
Sbjct: 595 SISYGALISGLCKESRLDEARQLYDTMIDKGL 626



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 111/377 (29%), Positives = 169/377 (44%), Gaps = 3/377 (0%)

Query: 191 MVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGM 250
           M   G+V    + N +I    +   V+    +  EM  + V  D  TY  +I  YC+ G 
Sbjct: 200 MRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPDSCTYKYIIVGYCRNGN 259

Query: 251 HYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTT 308
             EA      M   G   D  T   +I  FC +  +  A   F  +   G +PN + Y++
Sbjct: 260 VLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSS 319

Query: 309 LIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRL-LNEMNEK 367
           +I G C+   +++A  L E M   G  P V T+ S++  LCK+G    A RL L  +   
Sbjct: 320 MISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSD 379

Query: 368 KIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIA 427
              P+  T   +I+ YCK    + A  +  RM E GL+ +  TY  LI G CKA     A
Sbjct: 380 NYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKA 439

Query: 428 KELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRR 487
            EL+  M + GF P+ C+Y+ +VDG C +   E   KLL+      +  D   Y  LI  
Sbjct: 440 YELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISE 499

Query: 488 FCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMIT 547
            CK+  ++ A    N M   G   D  +YT+L  A+ R    K    + D++ +  L  T
Sbjct: 500 QCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPT 559

Query: 548 LKIYRSFSASYAKDNEI 564
            + Y S    Y ++ ++
Sbjct: 560 KETYTSMICGYCREKKV 576



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 117/414 (28%), Positives = 201/414 (48%), Gaps = 23/414 (5%)

Query: 64  FKWAESAVPN-YKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKI 122
           F+  E  V N +K ++ +H ++IH L K       +   E+ A R FL        L++ 
Sbjct: 334 FELLEEMVKNGWKPNVYTHTSLIHGLCK-------KGWTER-AFRLFLK-------LIR- 377

Query: 123 HDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTD 182
            D+   N H  + ++  Y   +       +F++M+   L+P+ +  T L++   K     
Sbjct: 378 SDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFS 437

Query: 183 MVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLI 242
             +++ + M   G   N   YN ++   CK    ++  KLL       + AD  TY  LI
Sbjct: 438 KAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILI 497

Query: 243 ALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGAT 300
           +  CK+    +AL   ++M + G  PDI  Y +LI  FCR+  M+++ +LF ++   G  
Sbjct: 498 SEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLA 557

Query: 301 PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRL 360
           P   TYT++I GYCR   +  A++  + M+  G  P  ++Y +++  LCKE R+ +A +L
Sbjct: 558 PTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQL 617

Query: 361 LNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCK 420
            + M +K ++P  VT  TL   YCK  D ASAM +  R L   L +   T   LI   C 
Sbjct: 618 YDTMIDKGLSPCEVTRVTLTYEYCKTEDFASAMVILER-LNKKLWIR--TVHTLIRKLCC 674

Query: 421 AKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGL 474
            K++ +A      +LD   +    + +   +  C ++N+ AL+  L E +S+G+
Sbjct: 675 EKKVALAALFFHKLLDKEVNVDRVTLAAF-NTACIESNKYALVSDLSERISKGI 727



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 86/326 (26%), Positives = 158/326 (48%), Gaps = 5/326 (1%)

Query: 257 VQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYC 314
           V D M   G+ PD  TY  +I G+CR G + EA R   ++  +G   ++ T T +I  +C
Sbjct: 231 VFDEMSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFC 290

Query: 315 RANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNV 374
             + +  A+     +   G+ P ++ Y+S++  LCK G ++ A  LL EM +    P+  
Sbjct: 291 EKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVY 350

Query: 375 TCNTLINAYCKIGDTASAMKVKNRMLEA-GLMLDQFTYKALIHGFCKAKEMDIAKELLFG 433
           T  +LI+  CK G T  A ++  +++ +     +  TY A+I G+CK +++  A+ L   
Sbjct: 351 THTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFER 410

Query: 434 MLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEK 493
           M + G  P+  +Y+ L+DG+C   N     +L++   + G   +   Y +++   CK+ +
Sbjct: 411 MKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGR 470

Query: 494 VDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRS 553
            + A +L N    N I  D V YT L     +  +       L+ M++      + +Y +
Sbjct: 471 AEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTT 530

Query: 554 FSASYAKDNEILDL--FWSHVVDRGL 577
             A++ + N + D    +  V+  GL
Sbjct: 531 LIAAFCRQNMMKDSEKLFDEVIKLGL 556



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 61/273 (22%), Positives = 117/273 (42%), Gaps = 36/273 (13%)

Query: 303 HVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLN 362
           H     ++  +     L+EA+ +   M  +G+       N I+    +   +  A  + +
Sbjct: 174 HEVVECMVGVFAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFD 233

Query: 363 EMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAK 422
           EM+ + + PD+ T   +I  YC+ G+   A +    M+E G ++D  T   +I  FC+  
Sbjct: 234 EMSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKS 293

Query: 423 EMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS----------- 471
            ++ A      +   G SP+  +YS ++ G C + + +   +LL+E V            
Sbjct: 294 LVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHT 353

Query: 472 ---RGLC----------------------VDVSVYRALIRRFCKKEKVDYAQRLFNLMQG 506
               GLC                       +V  Y A+I  +CK+EK+  A+ LF  M+ 
Sbjct: 354 SLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKE 413

Query: 507 NGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
            G++ ++  YT+L   + +AG      ++++ M
Sbjct: 414 QGLVPNTNTYTTLIDGHCKAGNFSKAYELMELM 446


>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 859

 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 135/495 (27%), Positives = 236/495 (47%), Gaps = 25/495 (5%)

Query: 80  SHWTMIHILTKNKHFKSAQN----MLEKIALRDFLSTPSVLNALVKIHD----------- 124
           S  T+IH   K      A N    M++K    D ++  S+++AL K              
Sbjct: 266 SFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQM 325

Query: 125 -----DPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDR 179
                +PDG ++  + ++  Y+     ++  ++F +M    L+P +      ++SL K  
Sbjct: 326 VDKGVEPDGLTY--TAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHG 383

Query: 180 LTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYN 239
            +    ++++ M   G + ++  Y++L+H          +  L   M  K + A+   +N
Sbjct: 384 RSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFN 443

Query: 240 TLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK-- 297
            LI+ + K+GM  EA+ V   M+ +G+ PD+VTY++LI  FCR GR+ +A   F  +   
Sbjct: 444 ILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISI 503

Query: 298 GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGV-YPGVVTYNSILRKLCKEGRIRD 356
           G  PN V Y +LI G+C   DL +A  L   M +KG+  P +V ++SI+  LC EGR+ D
Sbjct: 504 GLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMD 563

Query: 357 ANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIH 416
           A+ + N +      P  VT N+LI+ YC +G    A  V + M+  G+  D  TY  L+ 
Sbjct: 564 AHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVS 623

Query: 417 GFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCV 476
           G+CK+ ++D    L   ML     P+  +YS ++DG  +     A  K+  E +  G  V
Sbjct: 624 GYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAV 683

Query: 477 DVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDIL 536
           D+  Y+ L++  C+ +  D A  LF+ +       D  I  ++  A ++    +  +D+ 
Sbjct: 684 DIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRREEANDLF 743

Query: 537 DDMYRRRLMITLKIY 551
             +    L+  +  Y
Sbjct: 744 AAISTSGLVPNVSTY 758



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 115/401 (28%), Positives = 186/401 (46%), Gaps = 38/401 (9%)

Query: 190 KMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKG 249
           +MVQ GV  ++  YN ++ A CK+  +DK E +L +M  K V  D  TY  +I  Y   G
Sbjct: 289 EMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSG 348

Query: 250 MHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR--DIKGATPNHVTYT 307
              E+  +  +M  +G+ P IVT+NS +   C+ GR ++A  +F+    KG  P+ V+Y+
Sbjct: 349 HWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYS 408

Query: 308 TLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEK 367
            L+ GY       +   L   MA KG+      +N ++    K G + +A  +  EM  +
Sbjct: 409 ILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQ 468

Query: 368 KIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIA 427
            + PD VT +TLI+A+C++G  A AM+  ++M+  GL  +   Y +LIHGFC   ++  A
Sbjct: 469 GVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKA 528

Query: 428 KELLFGMLDAGFS------------------------------------PSYCSYSWLVD 451
           KEL+  M+  G                                      P+  +++ L+D
Sbjct: 529 KELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLID 588

Query: 452 GYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILG 511
           GYC     E    +LD  VS G+  DV  Y  L+  +CK  K+D    LF  M    +  
Sbjct: 589 GYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKP 648

Query: 512 DSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYR 552
            +V Y+ +    + AG   A   +  +M      + +  Y+
Sbjct: 649 TTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYK 689



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 109/400 (27%), Positives = 197/400 (49%), Gaps = 5/400 (1%)

Query: 146 TQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKD-RLTDMVWKVYKKMVQLGVVANIHLYN 204
           ++D  ++F  M     MP L + ++LL+  A + R  DM   ++  M   G+VAN H +N
Sbjct: 385 SKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADM-NNLFHSMADKGIVANCHCFN 443

Query: 205 VLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMERE 264
           +LI A  K   +D+   +  EM+ + VR D+ TY+TLI+ +C+ G   +A+    +M   
Sbjct: 444 ILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISI 503

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDI--KG-ATPNHVTYTTLIDGYCRANDLEE 321
           G+ P+ V Y+SLIHGFC  G + +A+ L  ++  KG   PN V ++++I   C    + +
Sbjct: 504 GLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMD 563

Query: 322 ALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
           A  +  ++   G  P +VT+NS++   C  G++  A  +L+ M    I PD VT NTL++
Sbjct: 564 AHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVS 623

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
            YCK G     + +   ML   +     TY  ++ G   A     AK++   M+D+G + 
Sbjct: 624 GYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAV 683

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
              +Y  L+ G C  +  +  + L  +  +     D+++   +I    K  + + A  LF
Sbjct: 684 DIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRREEANDLF 743

Query: 502 NLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
             +  +G++ +   Y  + +   + G  +    +   M +
Sbjct: 744 AAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEK 783



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 118/430 (27%), Positives = 202/430 (46%), Gaps = 17/430 (3%)

Query: 162 MPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG--VVANIHLYNVLIHACCKSSDVDKV 219
           +P+  +   ++ SL  D  +     + ++M + G     ++  +N +IH   K  +V K 
Sbjct: 224 VPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKA 283

Query: 220 EKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHG 279
             L+ EM  K V  D+ TYN+++   CK     +A  V  +M  +G+ PD +TY ++IHG
Sbjct: 284 CNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHG 343

Query: 280 FCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPG 337
           +   G  +E+ ++FR +  KG  P  VT+ + +   C+    ++A  + + M  KG  P 
Sbjct: 344 YSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPD 403

Query: 338 VVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKN 397
           +V+Y+ +L     EGR  D N L + M +K I  +    N LI+A+ K G    AM V  
Sbjct: 404 LVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFT 463

Query: 398 RMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKN 457
            M   G+  D  TY  LI  FC+   +  A E    M+  G  P+   Y  L+ G+C   
Sbjct: 464 EMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHG 523

Query: 458 NEEALLKLLDEFVSRGLC-VDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIY 516
           +     +L+ E +S+G+   ++  + ++I   C + +V  A  +FNL+   G     V +
Sbjct: 524 DLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTF 583

Query: 517 TSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRG 576
            SL   Y   G+ +    +LD M    +   +  Y +  + Y K  +I         D G
Sbjct: 584 NSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKI---------DDG 634

Query: 577 LMSKHIFKEM 586
           L+   +F+EM
Sbjct: 635 LI---LFREM 641



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 98/357 (27%), Positives = 166/357 (46%), Gaps = 11/357 (3%)

Query: 199 NIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQ 258
           ++H Y +L+  CC++   D        +    +R      NT +   C      EA+ V 
Sbjct: 155 SVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTRTIEANTFLKCLCHAKRTDEAVDVL 214

Query: 259 -DRMEREGISPDIVTYNSLIHGFCREGRMREA----RRLFRDIKGATPNHVTYTTLIDGY 313
             RM   G  P+ ++YN++I   C + R +EA    +R+ ++    +P+ V++ T+I G+
Sbjct: 215 LHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGF 274

Query: 314 CRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDN 373
            +  ++ +A  L   M  KGV P VVTYNSI+  LCK   +  A  +L +M +K + PD 
Sbjct: 275 FKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDG 334

Query: 374 VTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFG 433
           +T   +I+ Y   G    + K+  +M   GL+    T+ + +   CK      A+E+   
Sbjct: 335 LTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQY 394

Query: 434 MLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEK 493
           M   G  P   SYS L+ GY  +     +  L      +G+  +   +  LI    K+  
Sbjct: 395 MTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGM 454

Query: 494 VDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKI 550
           +D A  +F  MQG G+  D V Y++L  A+ R G       + D M +   MI++ +
Sbjct: 455 MDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGR------LADAMEKFSQMISIGL 505



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 102/386 (26%), Positives = 178/386 (46%), Gaps = 44/386 (11%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAK-DRLTDMVWKV 187
           N H  + L+  +A   M  + + VF +M+   + P +   + L+++  +  RL D + K 
Sbjct: 438 NCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEK- 496

Query: 188 YKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDV-RADLFTYNTLIALYC 246
           + +M+ +G+  N  +Y+ LIH  C   D+ K ++L+ EM  K + R ++  ++++I   C
Sbjct: 497 FSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLC 556

Query: 247 KKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHV 304
            +G   +A  V + +   G  P IVT+NSLI G+C  G+M +A  +   +   G  P+ V
Sbjct: 557 NEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVV 616

Query: 305 TYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM 364
           TY TL+ GYC++  +++ L L   M  K V P  VTY+ +L  L   GR   A ++ +EM
Sbjct: 617 TYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEM 676

Query: 365 NEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEM 424
                                              +++G  +D  TYK L+ G C+    
Sbjct: 677 -----------------------------------IDSGTAVDIDTYKILLKGLCRNDLT 701

Query: 425 DIAKELL--FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYR 482
           D A  L    G +D  F  +    + +++        E    L     + GL  +VS Y 
Sbjct: 702 DEAITLFHKLGAMDCKFDITI--LNTVINALYKVRRREEANDLFAAISTSGLVPNVSTYG 759

Query: 483 ALIRRFCKKEKVDYAQRLFNLMQGNG 508
            +I    K+  V+ A  +F+ M+ +G
Sbjct: 760 VMIHNLLKEGSVEEADTMFSSMEKSG 785



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 73/287 (25%), Positives = 127/287 (44%), Gaps = 10/287 (3%)

Query: 305 TYTTLIDGYCRAN--DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDA-NRLL 361
           TY  L+D  CRA   DL  A   R + A  G+    +  N+ L+ LC   R  +A + LL
Sbjct: 158 TYGILMDCCCRARRPDLGPAFFARLLRA--GLRTRTIEANTFLKCLCHAKRTDEAVDVLL 215

Query: 362 NEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAG--LMLDQFTYKALIHGFC 419
           + M++    P+ ++ NT+I + C    +  A+ +  RM + G     D  ++  +IHGF 
Sbjct: 216 HRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFF 275

Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
           K  E+  A  L+  M+  G  P   +Y+ +VD  C     +    +L + V +G+  D  
Sbjct: 276 KQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGL 335

Query: 480 VYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
            Y A+I  +        + ++F  M   G++   V + S   +  + G  K   +I   M
Sbjct: 336 TYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYM 395

Query: 540 YRRRLMITLKIYRSFSASYAKDNEILDL--FWSHVVDRGLMSK-HIF 583
             +  M  L  Y      YA +    D+   +  + D+G+++  H F
Sbjct: 396 TTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCF 442



 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 71/296 (23%), Positives = 115/296 (38%), Gaps = 46/296 (15%)

Query: 137 VIFYANL--KMTQDGLQVFDQMRVHNLMPHL--HACTVLLNSLAKDRL----TDMVWKVY 188
           ++F++++   +  +G +V D   V NL+ H+      V  NSL          +  + V 
Sbjct: 545 IVFFSSIIHSLCNEG-RVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVL 603

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
             MV +G+  ++  YN L+   CKS  +D    L  EM  K V+    TY+ ++      
Sbjct: 604 DAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHA 663

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREG------------------------ 284
           G    A  +   M   G + DI TY  L+ G CR                          
Sbjct: 664 GRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITIL 723

Query: 285 -----------RMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAA 331
                      R  EA  LF  I   G  PN  TY  +I    +   +EEA  +   M  
Sbjct: 724 NTVINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEK 783

Query: 332 KGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
            G  P     N I+R L ++G I  A   +++++   I+ +  T + L++ +   G
Sbjct: 784 SGCAPSSRLLNDIIRMLLQKGDIVKAGYYMSKVDGTIISLEASTTSLLMSLFSSKG 839



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 55/261 (21%), Positives = 105/261 (40%), Gaps = 21/261 (8%)

Query: 336 PGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTAS---- 391
           P V    +I R         DA+ L +E+  +     N   N  + A  +  D+ S    
Sbjct: 72  PQVAFVAAIARVRAGTFSTDDAHHLFDELLRQGTPVHNPALNGFLAALARAPDSVSCSNG 131

Query: 392 ---AMKVKNRML--EAG---LMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY 443
               + + NR+   EAG     L   TY  L+   C+A+  D+       +L AG     
Sbjct: 132 PALVLALFNRICREEAGPRVAPLSVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTRT 191

Query: 444 CSYSWLVDGYCN-KNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFC----KKEKVDYAQ 498
              +  +   C+ K  +EA+  LL      G   +   Y  +I+  C     +E +D  Q
Sbjct: 192 IEANTFLKCLCHAKRTDEAVDVLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQ 251

Query: 499 RLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASY 558
           R+    +G     D V + ++ + +++ GE     +++++M ++ +   +  Y S   + 
Sbjct: 252 RMAK--EGGRCSPDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDAL 309

Query: 559 AKDNEI--LDLFWSHVVDRGL 577
            K   +   +L    +VD+G+
Sbjct: 310 CKARAMDKAELVLRQMVDKGV 330



 Score = 41.2 bits (95), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 30/144 (20%), Positives = 64/144 (44%)

Query: 145 MTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYN 204
           +T + + +F ++   +    +     ++N+L K R  +    ++  +   G+V N+  Y 
Sbjct: 700 LTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRREEANDLFAAISTSGLVPNVSTYG 759

Query: 205 VLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMERE 264
           V+IH   K   V++ + +   ME           N +I +  +KG   +A     +++  
Sbjct: 760 VMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAGYYMSKVDGT 819

Query: 265 GISPDIVTYNSLIHGFCREGRMRE 288
            IS +  T + L+  F  +G+ RE
Sbjct: 820 IISLEASTTSLLMSLFSSKGKHRE 843


>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
          Length = 691

 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 108/337 (32%), Positives = 177/337 (52%), Gaps = 3/337 (0%)

Query: 231 VRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISP-DIVTYNSLIHGFCREGRMREA 289
            R D F +N  +      G   EA+ +  RM R+G  P +  +YN +I G  R GR  +A
Sbjct: 160 ARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDA 219

Query: 290 RRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRK 347
             +F ++  +   PNH+TY T+IDG+ +  DLE   RLR+ M   G+ P  +TYN +L  
Sbjct: 220 VEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSG 279

Query: 348 LCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLD 407
           LC+ GR+ + + LL+EM  +K+ PD  T + L +   + GD+ + + +  + L+ G+ + 
Sbjct: 280 LCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIG 339

Query: 408 QFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLD 467
            +T   L++G CK  ++ IA+E+L  +++AG  P+   Y+ L++GYC     E       
Sbjct: 340 DYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFG 399

Query: 468 EFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
           +  SR +  D   Y ALI   CK E++  AQ L   MQ NG+      + +L  AY R G
Sbjct: 400 QMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTG 459

Query: 528 EPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
           + + C  +L +M    L   +  Y S   ++ K+ +I
Sbjct: 460 QLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKI 496



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 106/409 (25%), Positives = 199/409 (48%), Gaps = 2/409 (0%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D ++VFD+M    ++P+      +++   K    +  +++  +MV  G+  N   YNVL+
Sbjct: 218 DAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLL 277

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
              C++  + +   LL EM  + +  D FTY+ L     + G     L++  +  + G++
Sbjct: 278 SGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVT 337

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
               T + L++G C++G++  A  + + +   G  P  V Y TLI+GYC+  +LE A   
Sbjct: 338 IGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFST 397

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
              M ++ + P  +TYN+++  LCK  RI +A  LL EM +  + P   T NTLI+AY +
Sbjct: 398 FGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGR 457

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            G       V + M E GL  +  +Y ++++ FCK  ++  A  +L  M      P+   
Sbjct: 458 TGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQV 517

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+ ++D Y      +    L+++  S G+   +  Y  LI+  C + ++  A+ + N + 
Sbjct: 518 YNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLS 577

Query: 506 GNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSF 554
            + ++ D+V Y +L  A    G      D+   M++  +  T++ Y   
Sbjct: 578 NHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQL 626



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 104/394 (26%), Positives = 188/394 (47%), Gaps = 2/394 (0%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           + D+M    ++P     ++L + L+++  +  +  ++ K ++ GV    +  ++L++  C
Sbjct: 292 LLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLC 351

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           K   V   E++L  +    +      YNTLI  YC+ G    A +   +M+   I PD +
Sbjct: 352 KDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHI 411

Query: 272 TYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           TYN+LI+G C+  R+  A+ L  +++  G  P   T+ TLID Y R   LE+   +   M
Sbjct: 412 TYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEM 471

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
              G+ P VV+Y SI+   CK G+I +A  +L++M  K + P+    N +I+AY + G  
Sbjct: 472 QENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPN 531

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
             A  +  +M   G+     TY  LI G C   ++  A+E++  + +    P   SY+ L
Sbjct: 532 DQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTL 591

Query: 450 VDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGI 509
           +   C + N +  L L       G+   V  Y  LI       +++  + L+  M  N +
Sbjct: 592 ISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNV 651

Query: 510 LGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRR 543
           +  + I+  +  AY + G      D+  +M ++R
Sbjct: 652 VPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKR 685



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 72/319 (22%), Positives = 143/319 (44%), Gaps = 24/319 (7%)

Query: 35  ASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHF 94
           A  + +  I+  L+N Y  C    L  AF  + +    + K    ++  +I+ L K +  
Sbjct: 369 AGLVPTRVIYNTLINGY--CQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERI 426

Query: 95  KSAQNMLEKIALRDFLSTPSVLNALVKIHD---------------DPDG-NSHVLSWLVI 138
            +AQ++L ++       T    N L+  +                  +G   +V+S+  I
Sbjct: 427 TNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSI 486

Query: 139 ---FYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
              F  N K+ +  + + D M   +++P+      ++++  +    D  + + +KM   G
Sbjct: 487 VNAFCKNGKIPE-AVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNG 545

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
           +  +I  YN+LI   C  S + + E+++  +    +  D  +YNTLI+  C +G   +AL
Sbjct: 546 ISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKAL 605

Query: 256 AVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGY 313
            +Q RM + GI   + TY+ LI G    GR+ E   L++ +      P++  +  +++ Y
Sbjct: 606 DLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAY 665

Query: 314 CRANDLEEALRLREVMAAK 332
            +  +  +A  LR+ M  K
Sbjct: 666 SKYGNEIKAEDLRKEMLQK 684


>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
 gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 126/467 (26%), Positives = 220/467 (47%), Gaps = 42/467 (8%)

Query: 146 TQDGLQVFDQMR--VHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLY 203
           +Q+ L++   M     +  P + + T ++N   K+   D  +  Y +M+  G++ N+  Y
Sbjct: 178 SQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTY 237

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER 263
           N +I A CK+  +DK  ++L  M    V  +  TYN+++  YC  G   EA+    +M  
Sbjct: 238 NSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHS 297

Query: 264 EGISPDIVTYNSLIHGFCREGRMREARRLF-----RDIK--------------------- 297
           +G+ PD+VTYNSL+   C+ GR  EAR++F     R +K                     
Sbjct: 298 DGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVE 357

Query: 298 -----------GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILR 346
                      G  PNH  ++ LI  Y +   +++A+ +   M  +G+ P  VTY +++ 
Sbjct: 358 MHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIG 417

Query: 347 KLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLML 406
            LCK GR+ DA R   +M +++++P N+  N+LI++ C       A ++   ML+ G+ L
Sbjct: 418 ILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICL 477

Query: 407 DQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLL 466
           D   + ++I   CK   +  +++L   M+  G  P+  +YS L+DGYC     +   KLL
Sbjct: 478 DTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLL 537

Query: 467 DEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRA 526
              VS G+  D   Y  LI  +CK  +++ A  LF  M+ +G+  D + Y  +    ++ 
Sbjct: 538 ASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQT 597

Query: 527 GEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDN---EILDLFWS 570
               A  ++   +      + L  Y        K+N   E L +F +
Sbjct: 598 RRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQN 644



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 123/440 (27%), Positives = 205/440 (46%), Gaps = 40/440 (9%)

Query: 167 ACTVLLNSLAKD-RLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCE 225
           A T LL  L  D R +D +  V ++M QLG + N+  YN+L+   C  +   +  +LL  
Sbjct: 128 AFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQM 187

Query: 226 M--EFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCRE 283
           M  +  D   D+ +Y T+I  + K+G   +A      M   GI P++VTYNS+I   C+ 
Sbjct: 188 MPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKA 247

Query: 284 GRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTY 341
             M +A  +   +   G  PN  TY +++ GYC +   +EA+   + M + GV P VVTY
Sbjct: 248 QAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTY 307

Query: 342 NSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN-------------------- 381
           NS++  LCK GR  +A ++ + M ++ + P+  T  TL+                     
Sbjct: 308 NSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVR 367

Query: 382 ---------------AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
                          AY K G    AM V ++M + GL  D  TY  +I   CK+  ++ 
Sbjct: 368 NGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVED 427

Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
           A      M+D   SP    Y+ L+   C  +  +   +L+ E + RG+C+D   + ++I 
Sbjct: 428 AMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIID 487

Query: 487 RFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMI 546
             CK+ +V  +++LF+LM   G+  + + Y++L   Y  AG+    + +L  M    +  
Sbjct: 488 SHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKP 547

Query: 547 TLKIYRSFSASYAKDNEILD 566
               Y +    Y K + + D
Sbjct: 548 DCVTYNTLINGYCKISRMED 567



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 105/373 (28%), Positives = 188/373 (50%), Gaps = 4/373 (1%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLA-KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           ++FD M    L P +     LL   A K  L +M   +   MV+ G+  N +++++LI A
Sbjct: 325 KMFDSMTKRGLKPEITTYGTLLQGYATKGALVEM-HGLLDLMVRNGIHPNHYVFSILICA 383

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
             K   VD+   +  +M  + +  D  TY T+I + CK G   +A+   ++M  E +SP 
Sbjct: 384 YAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPG 443

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLRE 327
            + YNSLIH  C   +  +A+ L  ++  +G   + + + ++ID +C+   + E+ +L +
Sbjct: 444 NIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFD 503

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
           +M   GV P ++TY++++   C  G++ +A +LL  M    + PD VT NTLIN YCKI 
Sbjct: 504 LMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKIS 563

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
               A+ +   M  +G+  D  TY  ++ G  + +    AKEL  G+ ++G      +Y+
Sbjct: 564 RMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYN 623

Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGN 507
            ++ G C  N  +  L++        L ++   +  +I    K  + D A+ LF  +  N
Sbjct: 624 IILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSAN 683

Query: 508 GILGDSVIYTSLA 520
           G++ D   Y+ +A
Sbjct: 684 GLVPDVRTYSLMA 696



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 124/448 (27%), Positives = 206/448 (45%), Gaps = 13/448 (2%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG---VVANIHLY 203
           +D   VFD++        ++     L  +A+      V + Y +M + G   V  N+  Y
Sbjct: 36  EDARHVFDELLRRGRGASIYGLNCALADVARHSPAAAVSR-YNRMARAGADEVTPNLCTY 94

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL-AVQDRME 262
            +LI +CC +  +D     L  +  K  R D   +  L+   C      +A+  V  RM 
Sbjct: 95  GILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 154

Query: 263 REGISPDIVTYNSLIHGFCREGRMREARRLFR----DIKGATPNHVTYTTLIDGYCRAND 318
           + G  P++ +YN L+ G C E R +EA  L +    D     P+ V+YTT+I+G+ +  D
Sbjct: 155 QLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGD 214

Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT 378
           L++A      M  +G+ P VVTYNSI+  LCK   +  A  +L  M +  + P+  T N+
Sbjct: 215 LDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNS 274

Query: 379 LINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAG 438
           +++ YC  G    A+    +M   G+  D  TY +L+   CK      A+++   M   G
Sbjct: 275 IVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRG 334

Query: 439 FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQ 498
             P   +Y  L+ GY  K     +  LLD  V  G+  +  V+  LI  + K+ KVD A 
Sbjct: 335 LKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAM 394

Query: 499 RLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSAS- 557
            +F+ M+  G+  D+V Y ++     ++G  +      + M   RL     +Y S   S 
Sbjct: 395 LVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSL 454

Query: 558 --YAKDNEILDLFWSHVVDRGLMSKHIF 583
             + K ++  +L    ++DRG+    IF
Sbjct: 455 CIFDKWDKAKELIL-EMLDRGICLDTIF 481



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 122/461 (26%), Positives = 211/461 (45%), Gaps = 22/461 (4%)

Query: 57  PSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLE---KIALRDFLSTP 113
           P  +  F K   S     +  + ++ +++  L KN     A+ M +   K  L+  ++T 
Sbjct: 285 PKEAIGFLKKMHS--DGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTY 342

Query: 114 SVL-------NALVKIHDDPD--------GNSHVLSWLVIFYANLKMTQDGLQVFDQMRV 158
             L        ALV++H   D         N +V S L+  YA        + VF +MR 
Sbjct: 343 GTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQ 402

Query: 159 HNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDK 218
             L P       ++  L K    +   + +++M+   +     +YN LIH+ C     DK
Sbjct: 403 QGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDK 462

Query: 219 VEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIH 278
            ++L+ EM  + +  D   +N++I  +CK+G   E+  + D M R G+ P+I+TY++LI 
Sbjct: 463 AKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLID 522

Query: 279 GFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYP 336
           G+C  G+M EA +L   +   G  P+ VTY TLI+GYC+ + +E+AL L   M + GV P
Sbjct: 523 GYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSP 582

Query: 337 GVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVK 396
            ++TYN IL+ L +  R   A  L   + E     +  T N +++  CK   T  A+++ 
Sbjct: 583 DIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMF 642

Query: 397 NRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNK 456
             +    L L+  T+  +I    K    D AK+L   +   G  P   +YS + +    +
Sbjct: 643 QNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQ 702

Query: 457 NNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYA 497
              E L  L       G   +  +  +++R+  ++  +  A
Sbjct: 703 GLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRA 743



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 109/443 (24%), Positives = 204/443 (46%), Gaps = 20/443 (4%)

Query: 80  SHWTMIHILTK----NKHFKSAQNMLEKIALRDFLSTPSVLNALVK-------------- 121
           S+ T+I+   K    +K + +   ML++  L + ++  S++ AL K              
Sbjct: 201 SYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSM 260

Query: 122 IHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLT 181
           + +    N    + +V  Y +    ++ +    +M    + P +     L++ L K+   
Sbjct: 261 VKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRC 320

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
               K++  M + G+   I  Y  L+        + ++  LL  M    +  + + ++ L
Sbjct: 321 TEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSIL 380

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGA 299
           I  Y K+G   +A+ V  +M ++G++PD VTY ++I   C+ GR+ +A R F  +  +  
Sbjct: 381 ICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERL 440

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
           +P ++ Y +LI   C  +  ++A  L   M  +G+    + +NSI+   CKEGR+ ++ +
Sbjct: 441 SPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEK 500

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
           L + M    + P+ +T +TLI+ YC  G    A K+   M+  G+  D  TY  LI+G+C
Sbjct: 501 LFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYC 560

Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
           K   M+ A  L   M  +G SP   +Y+ ++ G        A  +L       G  +++S
Sbjct: 561 KISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELS 620

Query: 480 VYRALIRRFCKKEKVDYAQRLFN 502
            Y  ++   CK    D A R+F 
Sbjct: 621 TYNIILHGLCKNNLTDEALRMFQ 643



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 72/268 (26%), Positives = 109/268 (40%), Gaps = 72/268 (26%)

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
           K++  MV++GV  NI  Y+ LI   C +  +D+  KLL  M    ++ D  TYNTLI  Y
Sbjct: 500 KLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGY 559

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNH 303
           CK     +AL +   ME  G+SPDI+TYN ++ G  +  R   A+ L+  I   G     
Sbjct: 560 CKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLEL 619

Query: 304 VTYTTLIDGYCRANDLEEALRLRE-----------------------------------V 328
            TY  ++ G C+ N  +EALR+ +                                    
Sbjct: 620 STYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAA 679

Query: 329 MAAKGVYPGVVTY-----------------------------------NSILRKLCKEGR 353
           ++A G+ P V TY                                   NSI+RKL + G 
Sbjct: 680 LSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGD 739

Query: 354 IRDANRLLNEMNEKKIAPDNVTCNTLIN 381
           I  A   L  ++EK  + +  T +  ++
Sbjct: 740 ITRAGTYLFMIDEKHFSLEASTASLFLD 767


>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
          Length = 1048

 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 123/420 (29%), Positives = 205/420 (48%), Gaps = 2/420 (0%)

Query: 122 IHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLT 181
           +H  P  +    + L+   ANL+  +  +    +M ++ +   L++ T+L++   +    
Sbjct: 63  VHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRL 122

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
                V  KM++LG   +I  +  L+H  C  + +     L+  M       ++  YNTL
Sbjct: 123 SFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTL 182

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGA 299
           I   CK G    AL + + ME++G+  D+VTYN+L+ G C  GR  +A R+ RD+  +  
Sbjct: 183 IDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSI 242

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
            P+ VT+T LID + +  +L+EA  L + M    V P  VTYNSI+  LC  GR+ DA +
Sbjct: 243 NPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKK 302

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
             + M  K   P+ VT NTLI+ +CK       MK+  RM   G   D FTY  LIHG+C
Sbjct: 303 TFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYC 362

Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
           +  ++ +A ++   M+    +P   ++  L+ G C     E+ L   D+       + + 
Sbjct: 363 QVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIV 422

Query: 480 VYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
            Y  +I   CK +KV+ A  LF  +   G+  D+  YT +     + G  +   +++  M
Sbjct: 423 AYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRM 482



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 129/441 (29%), Positives = 209/441 (47%), Gaps = 37/441 (8%)

Query: 148  DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
            D   +F +M     +P +   T +L  +AK    D+V  +Y KM  LG+  +++ + +LI
Sbjct: 587  DAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILI 646

Query: 208  HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRM------ 261
            H  C+ S +     LL +M     R  + T  +L+  +C+     EA+++ D M      
Sbjct: 647  HCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFV 706

Query: 262  -----------------------------EREGISPDIVTYNSLIHGFCREGRMREARRL 292
                                         E++GI  D VTYN+LI G    GR  +A RL
Sbjct: 707  PNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARL 766

Query: 293  FRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
             RD+  +   PN + +T LID + +  +L EA  L + M  + V P V TYNS++   C 
Sbjct: 767  LRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCI 826

Query: 351  EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
             G + DA  + + M  K   PD VT NTLI  +CK       MK+   M   GL+ D FT
Sbjct: 827  HGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFT 886

Query: 411  YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFV 470
            Y  LIHG+C+A ++++A+++   M+D G SP   +Y+ L+D  CN    E  L ++++  
Sbjct: 887  YNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQ 946

Query: 471  SRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPK 530
               + VD+  Y  +I+  C+ +K+  A  LF  +   G+  D++ Y ++     R G  +
Sbjct: 947  KSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQR 1006

Query: 531  ACSDILDDMYRRRLMITLKIY 551
                +   M     M + +IY
Sbjct: 1007 EADKLCRRMKEDGFMPSERIY 1027



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 114/372 (30%), Positives = 188/372 (50%), Gaps = 2/372 (0%)

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
           D  + ++ +M+Q   + +I  +  ++    K +  D V  L  +ME   +  DL+++  L
Sbjct: 586 DDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTIL 645

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF--RDIKGA 299
           I  +C+      ALA+  +M + G  P IVT  SL++GFC+  R +EA  L    D  G 
Sbjct: 646 IHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGF 705

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
            PN V Y T+I+G C+  DL  AL +   M  KG+    VTYN+++  L   GR  DA R
Sbjct: 706 VPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAAR 765

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
           LL +M ++KI P+ +    LI+ + K G+   A  +   M+   ++ + FTY +LI+GFC
Sbjct: 766 LLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFC 825

Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
               +  AK +   M+  G  P   +Y+ L+ G+C     E  +KL  E   +GL  D  
Sbjct: 826 IHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAF 885

Query: 480 VYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
            Y  LI  +C+  K++ AQ++FN M   G+  D V Y  L       G+ +    +++D+
Sbjct: 886 TYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDL 945

Query: 540 YRRRLMITLKIY 551
            +  + + +  Y
Sbjct: 946 QKSEMDVDIITY 957



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 95/287 (33%), Positives = 143/287 (49%), Gaps = 2/287 (0%)

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRAN 317
           +ME  GIS D+ ++  LIH FCR  R+  A  +   +   G  P+ VT+ +L+ G+C  N
Sbjct: 96  KMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVN 155

Query: 318 DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCN 377
            + +A  L  +M   G  P VV YN+++  LCK G +  A  LLNEM +K +  D VT N
Sbjct: 156 RIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYN 215

Query: 378 TLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA 437
           TL+   C  G  + A ++   M++  +  D  T+ ALI  F K   +D A+EL   M+ +
Sbjct: 216 TLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQS 275

Query: 438 GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYA 497
              P+  +Y+ +++G C         K  D   S+G   +V  Y  LI  FCK   VD  
Sbjct: 276 SVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEG 335

Query: 498 QRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL 544
            +LF  M   G   D   Y +L + Y + G+ +   DI   M  RR+
Sbjct: 336 MKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRV 382



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 92/342 (26%), Positives = 167/342 (48%), Gaps = 2/342 (0%)

Query: 147  QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
            Q+ + + D M     +P++     ++N L K+R  +   +V+  M + G+ A+   YN L
Sbjct: 691  QEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTL 750

Query: 207  IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
            I     S       +LL +M  + +  ++  +  LI  + K+G   EA  +   M R  +
Sbjct: 751  ISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSV 810

Query: 267  SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
             P++ TYNSLI+GFC  G + +A+ +F  +  KG  P+ VTY TLI G+C++  +E+ ++
Sbjct: 811  VPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMK 870

Query: 325  LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
            L   M  +G+     TYN+++   C+ G++  A ++ N M +  ++PD VT N L++  C
Sbjct: 871  LFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLC 930

Query: 385  KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
              G    A+ +   + ++ + +D  TY  +I G C+  ++  A  L   +   G  P   
Sbjct: 931  NNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAI 990

Query: 445  SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
            +Y  ++ G C K  +    KL       G      +Y   +R
Sbjct: 991  AYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLR 1032



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 116/528 (21%), Positives = 204/528 (38%), Gaps = 102/528 (19%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D  + FD M      P++     L++   K R+ D   K++++M   G  A+I  YN LI
Sbjct: 299 DAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLI 358

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFT------------------------------ 237
           H  C+   +     + C M  + V  D+ T                              
Sbjct: 359 HGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKY 418

Query: 238 -----YNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRL 292
                YN +I   CK     +A  +  R+  EG+ PD  TY  +I G C+ G  REA  L
Sbjct: 419 IGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADEL 478

Query: 293 FRDIK--------GATPNH----------------------------------VTYTTLI 310
            R +K         A  +H                                  + +++ +
Sbjct: 479 IRRMKEEGIICQMNAEDDHLEEHSSSNKEISLSLREIWERSKSNPFWMQRLIPIAFSSSV 538

Query: 311 DGYCR--------ANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLN 362
            G+ R         N+ E +L  R    A   +     Y   LR      +  DA  L  
Sbjct: 539 KGFVRRHYLLLERGNNPETSLS-RSFSGASHHH----HYRERLRNELHCIKFDDAFSLFC 593

Query: 363 EMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAK 422
           EM + +  P  V    ++    K+      + + ++M   G+  D +++  LIH FC+  
Sbjct: 594 EMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCS 653

Query: 423 EMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYR 482
            + +A  LL  M+  GF PS  +   L++G+C  N  +  + L+D     G   +V +Y 
Sbjct: 654 RLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYN 713

Query: 483 ALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRR 542
            +I   CK   ++ A  +F  M+  GI  D+V Y +L      +G     + +L DM +R
Sbjct: 714 TVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKR 773

Query: 543 RLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKEMQLRN 590
           ++   +  + +   ++ K+  +L+            +++++KEM  R+
Sbjct: 774 KIDPNVIFFTALIDTFVKEGNLLE------------ARNLYKEMIRRS 809



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/228 (24%), Positives = 97/228 (42%)

Query: 312 GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAP 371
           G+  +   E+A  L   M      P +V +  +L       R         +M    I+ 
Sbjct: 45  GFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISH 104

Query: 372 DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
           D  +   LI+ +C+    + A+ V  +M++ G      T+ +L+HGFC    +  A  L+
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164

Query: 432 FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
             M+ +G+ P+   Y+ L+DG C        L+LL+E   +GL  DV  Y  L+   C  
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224

Query: 492 EKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
            +   A R+   M    I  D V +T+L   + + G      ++  +M
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEM 272



 Score = 78.6 bits (192), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 84/192 (43%)

Query: 353 RIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYK 412
           R  DA  L  EM   +  P  V    L+ A   +    + +    +M   G+  D +++ 
Sbjct: 51  RFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFT 110

Query: 413 ALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSR 472
            LIH FC+   +  A  +L  M+  G+ PS  ++  L+ G+C  N       L+   V  
Sbjct: 111 ILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKS 170

Query: 473 GLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKAC 532
           G   +V VY  LI   CK  +++ A  L N M+  G+  D V Y +L      +G     
Sbjct: 171 GYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDA 230

Query: 533 SDILDDMYRRRL 544
           + +L DM +R +
Sbjct: 231 ARMLRDMMKRSI 242



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 87/466 (18%), Positives = 182/466 (39%), Gaps = 47/466 (10%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           +  L  FD MR       + A  ++++ L K    +  W+++ ++   GV  +   Y ++
Sbjct: 403 ESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIM 462

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           I   CK+    + ++L+  M+ + +   +   +  +  +        +L++++  ER   
Sbjct: 463 ILGLCKNGPRREADELIRRMKEEGIICQMNAEDDHLEEHSSSNKEI-SLSLREIWERSKS 521

Query: 267 SP------DIVTYNSLIHGFCREGRMREAR------RLFRDIKGAT-------------- 300
           +P        + ++S + GF R   +   R       L R   GA+              
Sbjct: 522 NPFWMQRLIPIAFSSSVKGFVRRHYLLLERGNNPETSLSRSFSGASHHHHYRERLRNELH 581

Query: 301 --------------------PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVT 340
                               P+ V +T ++    + N  +  + L   M   G+   + +
Sbjct: 582 CIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYS 641

Query: 341 YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML 400
           +  ++   C+  R+  A  LL +M +    P  VT  +L+N +C+      A+ + + M 
Sbjct: 642 FTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMD 701

Query: 401 EAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEE 460
             G + +   Y  +I+G CK ++++ A E+ + M   G      +Y+ L+ G  N     
Sbjct: 702 GFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWT 761

Query: 461 ALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLA 520
              +LL + V R +  +V  + ALI  F K+  +  A+ L+  M    ++ +   Y SL 
Sbjct: 762 DAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLI 821

Query: 521 YAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
             +   G       + D M  +     +  Y +    + K   + D
Sbjct: 822 NGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVED 867


>gi|224069250|ref|XP_002302937.1| predicted protein [Populus trichocarpa]
 gi|222844663|gb|EEE82210.1| predicted protein [Populus trichocarpa]
          Length = 564

 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 114/357 (31%), Positives = 189/357 (52%), Gaps = 2/357 (0%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
            Q+   ++   L P++   T L++   K+   +     + KM ++G+VAN + + VLI+ 
Sbjct: 182 FQLLGLLQDMGLSPNVVIYTTLIDGCCKNGDIERARLFFDKMGEMGLVANQYTFTVLING 241

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
             K         L  +M+   +  +L+TYN L+  YC +G    A  + D M   G+  +
Sbjct: 242 LFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEAN 301

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDIKGA--TPNHVTYTTLIDGYCRANDLEEALRLRE 327
           +VTYN+LI G CRE R+ EA +L   +K A  +PN +TY TLI G+C   +L++A  L +
Sbjct: 302 VVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLD 361

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
            + + G+ P +VTYN ++    K G  +    L  EM  + I+P  VTC  LI+AY ++ 
Sbjct: 362 QLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQ 421

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
           +   A ++ + M + GL+ D + Y  LIHG C    M  + +L   M +    PS   Y+
Sbjct: 422 EMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYN 481

Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
            ++ GYC ++N    L+LL E  ++GL  +V+ Y ++I   CK  K + A+ L + M
Sbjct: 482 TMIHGYCKEDNSYRALRLLREMEAKGLVPNVASYSSIIGVLCKDGKWEEAEVLLDKM 538



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 143/556 (25%), Positives = 256/556 (46%), Gaps = 21/556 (3%)

Query: 44  HKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEK 103
            + L+ +     IP L  A   +  S    ++H+  S   ++  L  +     AQ+++ +
Sbjct: 4   QQALILIQKMVKIPPLQ-ALSLFNSSIQQGFQHTHHSISFLLQHLLDHHKLPHAQSLILQ 62

Query: 104 I----ALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLK--MTQDGLQVFDQMR 157
           I        F + PS+L+ L + + +P   + +L +  I  A+LK  +    L  F++M 
Sbjct: 63  ILSNKISSPFFTVPSLLHHLTQ-NQNPSMTTALL-YESIINAHLKSQLLDKALIFFNEMV 120

Query: 158 VHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVD 217
              L+   +    LL SL +    +  W  + ++ +  V  +++ + ++I  CC++ ++D
Sbjct: 121 DKGLVFRPNIFNSLLGSLVRSNCFEKAWLFFNELKER-VKFDVYSFGIMIKGCCENGNLD 179

Query: 218 KVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLI 277
           K  +LL  ++   +  ++  Y TLI   CK G    A    D+M   G+  +  T+  LI
Sbjct: 180 KSFQLLGLLQDMGLSPNVVIYTTLIDGCCKNGDIERARLFFDKMGEMGLVANQYTFTVLI 239

Query: 278 HGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVY 335
           +G  ++G  ++   LF  +K  G  PN  TY  L++ YC    +  A  L + M  +GV 
Sbjct: 240 NGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVE 299

Query: 336 PGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKV 395
             VVTYN+++  +C+E R+ +A +L+++M +  ++P+ +T NTLI  +C +G+   A  +
Sbjct: 300 ANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSL 359

Query: 396 KNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCN 455
            +++   GL     TY  LI G+ KA       +L   M   G SPS  + + L+D Y  
Sbjct: 360 LDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVR 419

Query: 456 KNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVI 515
               E   ++       GL  DV VY  LI   C K  +  + +LF  M    +    VI
Sbjct: 420 LQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVI 479

Query: 516 YTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDR 575
           Y ++ + Y +         +L +M  + L+  +  Y S      KD +     W      
Sbjct: 480 YNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVASYSSIIGVLCKDGK-----WEEA--E 532

Query: 576 GLMSKHIFKEMQLRNS 591
            L+ K I  E+QL+ S
Sbjct: 533 VLLDKMI--ELQLKPS 546


>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 550

 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 117/378 (30%), Positives = 199/378 (52%), Gaps = 2/378 (0%)

Query: 171 LLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKD 230
           L+N L K   T    ++ KK+    V  ++ +YN++I++ CK   V    +L  EM  K 
Sbjct: 170 LINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKR 229

Query: 231 VRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREAR 290
           +  D+ T+N+LI  +C  G   EA  +   M  + I+PD+ T++ L+   C++G +  A+
Sbjct: 230 ISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAK 289

Query: 291 RLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
            +   +  +G  P+ VTY++L+DGYC  N++ +A  +   M+  GV P   +YN ++  L
Sbjct: 290 NMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGL 349

Query: 349 CKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ 408
            K   + +A  L  EM  K IAPD VT N+LI+  CK+G  + A ++ + M   G+  D 
Sbjct: 350 GKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADI 409

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
            TY +LI   CK   +D A  L+  + D G  PS  +Y+ L+DG C     +    +  +
Sbjct: 410 LTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQD 469

Query: 469 FVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
            + +G  V+   Y  +I   CK+   + A+ L + M+ NGI+ D+V Y ++  A +R  E
Sbjct: 470 LLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRALFRKDE 529

Query: 529 PKACSDILDDMYRRRLMI 546
            +    +L +M  R L++
Sbjct: 530 NEKAEKLLREMIIRGLLL 547



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 123/468 (26%), Positives = 231/468 (49%), Gaps = 28/468 (5%)

Query: 50  LYNC-CHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRD 108
           L NC CH+  ++ AF  +A+     Y  +  +  T+I+ +  N   K A +  + +    
Sbjct: 100 LVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIALG 159

Query: 109 F----LSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPH 164
           F    +S  +++N L KI +                     T+  LQ+  ++    +   
Sbjct: 160 FHLDQVSYRTLINGLCKIGE---------------------TRAALQMLKKIEGKLVNTD 198

Query: 165 LHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLC 224
           +    +++NSL KD+     +++Y +M+   +  ++  +N LI   C    + +   L  
Sbjct: 199 VVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFH 258

Query: 225 EMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREG 284
           EM  K++  D++T++ L+   CK G    A  +   M ++G+ PD+VTY+SL+ G+C   
Sbjct: 259 EMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVN 318

Query: 285 RMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYN 342
            + +A+ +F  +   G  P+  +Y  +I+G  +   ++EAL L + M  KG+ P  VTYN
Sbjct: 319 EVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYN 378

Query: 343 SILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEA 402
           S++  LCK GRI  A +L++EM+   I  D +T N+LI+  CK      A+ +  ++ + 
Sbjct: 379 SLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQ 438

Query: 403 GLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEAL 462
           G+    +TY  LI G CK   +  A+++   +L  G+S +  +Y+ +++G C +      
Sbjct: 439 GIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEA 498

Query: 463 LKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGIL 510
             LL +  + G+  D   Y  +IR   +K++ + A++L   M   G+L
Sbjct: 499 EVLLSKMENNGIIPDAVTYETIIRALFRKDENEKAEKLLREMIIRGLL 546



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 101/342 (29%), Positives = 165/342 (48%), Gaps = 2/342 (0%)

Query: 225 EMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREG 284
           ++E K +   + T+N L+  YC  G    A ++  ++ + G  P  +T+N+LI+G C  G
Sbjct: 84  QLELKGITPTIVTFNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNG 143

Query: 285 RMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYN 342
           +++EA      +   G   + V+Y TLI+G C+  +   AL++ + +  K V   VV YN
Sbjct: 144 KLKEALHFHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYN 203

Query: 343 SILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEA 402
            I+  LCK+  + DA +L +EM  K+I+PD VT N+LI  +C +G    A  + + M+  
Sbjct: 204 IIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLK 263

Query: 403 GLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEAL 462
            +  D +T+  L+   CK   +  AK +L  M+  G  P   +YS L+DGYC  N     
Sbjct: 264 NINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKA 323

Query: 463 LKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYA 522
             +       G+      Y  +I    K + VD A  LF  M   GI  D+V Y SL   
Sbjct: 324 KHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDG 383

Query: 523 YWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
             + G       ++D+M+   +   +  Y S      K++ I
Sbjct: 384 LCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHI 425



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 46/226 (20%), Positives = 96/226 (42%), Gaps = 20/226 (8%)

Query: 370 APDNVTCNTLINAYCKIGDT--ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIA 427
            P  V  N ++ +  K  +    +A+ + +++   G+     T+  L++ +C   EM  A
Sbjct: 54  TPSIVEFNKILGSIVKANNNHYTTAISLSHQLELKGITPTIVTFNILVNCYCHLGEMTFA 113

Query: 428 KELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRR 487
             +   +L  G+ P+  +++ L++G C     +  L   D  ++ G  +D   YR LI  
Sbjct: 114 FSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIALGFHLDQVSYRTLING 173

Query: 488 FCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSD---ILDDMYRRRL 544
            CK  +   A ++   ++G  +  D V+Y  +  +  +    KA SD   +  +M  +R+
Sbjct: 174 LCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCK---DKAVSDAYQLYSEMITKRI 230

Query: 545 MITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKEMQLRN 590
              +  + S    +    ++ + F             +F EM L+N
Sbjct: 231 SPDVVTFNSLILGFCVVGQLKEAFG------------LFHEMVLKN 264


>gi|302767030|ref|XP_002966935.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
 gi|300164926|gb|EFJ31534.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
          Length = 428

 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 127/410 (30%), Positives = 197/410 (48%), Gaps = 40/410 (9%)

Query: 170 VLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFK 229
            L+  L K R      ++   M   G  A++  Y  LI   CKS D+D  + LL +M   
Sbjct: 15  TLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADA 74

Query: 230 DVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA 289
               ++ TY  LI   CK    ++A+    RM R G  PD+VTYNSLIHG C   RM +A
Sbjct: 75  GCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDA 134

Query: 290 RRLFRDI---KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILR 346
             + +++    G  P+ VTY T I G C+A  L++ L + E M   G+ P VVT+ SI+ 
Sbjct: 135 GLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVVTFCSIIS 194

Query: 347 KLCKEGRIRDANRLLNEMNEKKIAPDNVTCN----------------------------- 377
            LCK  RI DA ++   M E+   PD++T +                             
Sbjct: 195 GLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMVKSGHYA 254

Query: 378 ------TLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
                  LI+A  + GD  SA     + +EAG +++ +T+ A I   C++ +  +AK +L
Sbjct: 255 LSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGKFPLAKNIL 314

Query: 432 FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLC-VDVSVYRALIRRFCK 490
            GM+++G  P+  SY++++DG C   N +   KL  + +  G C  DV  +  LI  FCK
Sbjct: 315 LGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCK 374

Query: 491 KEKVDYAQRLFNLMQGNGI-LGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
             ++  AQ+L   M+   I + D V Y ++     + G  K    +L++M
Sbjct: 375 AGRLSQAQQLLKEMKAKNICVPDVVTYNTMIDGQSKFGSLKQAKLLLEEM 424



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 120/444 (27%), Positives = 198/444 (44%), Gaps = 57/444 (12%)

Query: 70  AVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGN 129
           A   Y  S+ ++ T+I  L K+    +AQ +L+K+A  D    P+V+             
Sbjct: 37  AANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMA--DAGCAPNVVTY----------- 83

Query: 130 SHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYK 189
                                                  T L++ L K R      +  K
Sbjct: 84  ---------------------------------------TALIDGLCKARRPHDAIQTVK 104

Query: 190 KMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVR-ADLFTYNTLIALYCKK 248
           +M++ G   ++  YN LIH  C ++ +D    +L E+  +  R  D+ TYNT I+  CK 
Sbjct: 105 RMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKA 164

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTY 306
           G   + L + + M+R GISPD+VT+ S+I G C+  R+ +A ++F+ +  +G  P+ +TY
Sbjct: 165 GKLDKGLEMLEEMDRGGISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTY 224

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
           + ++D   RAN L+    + E M   G Y    TY  ++  L + G I  A+    +  E
Sbjct: 225 SIMLDNLSRANRLDTVEEVLEHMVKSGHYALSATYAPLIHALIRAGDIESASWAYEQAME 284

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
                +  T N  I A C+ G    A  +   M+E+G + +  +Y  +I G CK+  +D 
Sbjct: 285 AGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDD 344

Query: 427 AKELLFGMLDAG-FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCV-DVSVYRAL 484
           A +L   MLD+G   P    ++ L+ G+C         +LL E  ++ +CV DV  Y  +
Sbjct: 345 AWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAQQLLKEMKAKNICVPDVVTYNTM 404

Query: 485 IRRFCKKEKVDYAQRLFNLMQGNG 508
           I    K   +  A+ L   MQ  G
Sbjct: 405 IDGQSKFGSLKQAKLLLEEMQAVG 428



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 100/317 (31%), Positives = 151/317 (47%), Gaps = 3/317 (0%)

Query: 226 MEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGR 285
           M  +  R D   YNTLIA  CK      AL +   M   G    +VTY +LI G C+ G 
Sbjct: 1   MASRHFRLDAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGD 60

Query: 286 MREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNS 343
           +  A+ L + +   G  PN VTYT LIDG C+A    +A++  + M   G  P +VTYNS
Sbjct: 61  LDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNS 120

Query: 344 ILRKLCKEGRIRDANRLLNE-MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEA 402
           ++  LC   R+ DA  +L E M E    PD VT NT I+  CK G     +++   M   
Sbjct: 121 LIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRG 180

Query: 403 GLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEAL 462
           G+  D  T+ ++I G CKA  +D A ++  GML+ G  P   +YS ++D     N  + +
Sbjct: 181 GISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTV 240

Query: 463 LKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYA 522
            ++L+  V  G     + Y  LI    +   ++ A   +      G + +   + +   A
Sbjct: 241 EEVLEHMVKSGHYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGA 300

Query: 523 YWRAGEPKACSDILDDM 539
             R+G+     +IL  M
Sbjct: 301 LCRSGKFPLAKNILLGM 317



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/255 (32%), Positives = 127/255 (49%), Gaps = 8/255 (3%)

Query: 306 YTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMN 365
           Y TLI G C+A     AL L  VMAA G    VVTY +++  LCK G +  A  LL +M 
Sbjct: 13  YNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMA 72

Query: 366 EKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMD 425
           +   AP+ VT   LI+  CK      A++   RML +G   D  TY +LIHG C A  MD
Sbjct: 73  DAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMD 132

Query: 426 IAKELLFG-MLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRAL 484
            A  +L   M+++G  P   +Y+  + G C     +  L++L+E    G+  DV  + ++
Sbjct: 133 DAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVVTFCSI 192

Query: 485 IRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL 544
           I   CK  ++D A ++F  M   G + DS+ Y+ +     RA       ++L+ M +   
Sbjct: 193 ISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMVKSG- 251

Query: 545 MITLKIYRSFSASYA 559
                 + + SA+YA
Sbjct: 252 ------HYALSATYA 260



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/215 (30%), Positives = 95/215 (44%), Gaps = 1/215 (0%)

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           MA++        YN+++  LCK  + R A  LL+ M         VT  TLI+  CK GD
Sbjct: 1   MASRHFRLDAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGD 60

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
             +A  +  +M +AG   +  TY ALI G CKA+    A + +  ML +G  P   +Y+ 
Sbjct: 61  LDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNS 120

Query: 449 LVDGYCNKNN-EEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGN 507
           L+ G C  N  ++A L L +  +  G   DV  Y   I   CK  K+D    +   M   
Sbjct: 121 LIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRG 180

Query: 508 GILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRR 542
           GI  D V + S+     +A        +   M  R
Sbjct: 181 GISPDVVTFCSIISGLCKANRIDDAFQVFKGMLER 215


>gi|147768815|emb|CAN62672.1| hypothetical protein VITISV_031896 [Vitis vinifera]
          Length = 530

 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 123/371 (33%), Positives = 189/371 (50%), Gaps = 2/371 (0%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D L  F++M   +  P     T LL S+AK +    V  +  +M   G+  +++  N+LI
Sbjct: 95  DALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILI 154

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           ++ C    +     +L ++     + D  T+NTLI   C +G   EAL + D+   EG  
Sbjct: 155 NSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQ 214

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
           PD+VTY +L++G C+ G    A RL R +  K   PN + Y T+ID  C+   + EA  L
Sbjct: 215 PDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNL 274

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
              M  KG+ P + TYNS++  LC     +    LLNEM   KI P+ V  +T+++A CK
Sbjct: 275 FSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCK 334

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            G  A A  V + M++ G+  D  TY AL+ G C   EMD A ++   M+  G  P+  S
Sbjct: 335 EGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRS 394

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+ L++GYC     +  + LL++   +GL  D   Y  LI   C   ++ +A  LF+ M 
Sbjct: 395 YNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMV 454

Query: 506 GNGILGDSVIY 516
            +G + D V Y
Sbjct: 455 ASGQIPDLVTY 465



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 102/352 (28%), Positives = 177/352 (50%), Gaps = 2/352 (0%)

Query: 203 YNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRME 262
           +  L+ +  K      V  L  +M+   +  D++T N LI  +C       A +V  ++ 
Sbjct: 115 FTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLL 174

Query: 263 REGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLE 320
           + G  PD  T+N+LI G C EG++ EA  LF     +G  P+ VTY TL++G C+  +  
Sbjct: 175 KLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTS 234

Query: 321 EALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLI 380
            A+RL   M  K   P V+ YN+I+  LCK+ ++ +A  L +EM  K I+PD  T N+LI
Sbjct: 235 AAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLI 294

Query: 381 NAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFS 440
           +A C + +      + N M+ + +M +   +  ++   CK   + IA +++  M+  G  
Sbjct: 295 HALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVE 354

Query: 441 PSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRL 500
           P   +Y+ L+DG+C ++  +  +K+ D  V +G   +V  Y  LI  +C+ +++D A  L
Sbjct: 355 PDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGL 414

Query: 501 FNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYR 552
              M   G++ D+V Y +L +     G  +    +  +M     +  L  YR
Sbjct: 415 LEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYR 466



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 123/444 (27%), Positives = 211/444 (47%), Gaps = 37/444 (8%)

Query: 9   SDTKFIKTISAIMLKGHWAKLLNPNIASSLTSTAIHK------VLLNLYNCCHIPSLSCA 62
           S   F K +++I    H++ +L+  +++ + S  I        +L+N +  CH+  L  A
Sbjct: 111 STVDFTKLLTSIAKMKHYSTVLS--LSTQMDSFGIPPDVYTLNILINSF--CHLRRLGYA 166

Query: 63  FFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDF----LSTPSVLNA 118
           F   A+      +    +  T+I  L        A ++ +K     F    ++  +++N 
Sbjct: 167 FSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNG 226

Query: 119 LVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKD 178
           L K+     GN                T   +++   M   N  P++ A   +++SL KD
Sbjct: 227 LCKV-----GN----------------TSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKD 265

Query: 179 RLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTY 238
           R     + ++ +M+  G+  +I  YN LIHA C   +   V  LL EM    +  ++  +
Sbjct: 266 RQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVF 325

Query: 239 NTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI-- 296
           +T++   CK+GM   A  V D M + G+ PD+VTY +L+ G C    M EA ++F  +  
Sbjct: 326 STVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVH 385

Query: 297 KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRD 356
           KG  PN  +Y  LI+GYC+   +++A+ L E M+ +G+    VTYN+++  LC  GR++ 
Sbjct: 386 KGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQH 445

Query: 357 ANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIH 416
           A  L +EM      PD VT   L++  CK    A AM +   +  + L  D   Y   I 
Sbjct: 446 AIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAID 505

Query: 417 GFCKAKEMDIAKELLFGMLDAGFS 440
           G C+A E++ A++L   +   GF+
Sbjct: 506 GMCRAGELEAARDLFSNLSCQGFA 529



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 113/424 (26%), Positives = 185/424 (43%), Gaps = 37/424 (8%)

Query: 122 IHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLT 181
           +H  P  ++   + L+   A +K     L +  QM    + P ++   +L+NS    R  
Sbjct: 104 LHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRL 163

Query: 182 DMVWKVYKKMVQLGVVAN--------------------IHL---------------YNVL 206
              + V  K+++LG   +                    +HL               Y  L
Sbjct: 164 GYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTL 223

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           ++  CK  +     +LL  M  K+ R ++  YNT+I   CK     EA  +   M  +GI
Sbjct: 224 MNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGI 283

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDIKGA--TPNHVTYTTLIDGYCRANDLEEALR 324
           SPDI TYNSLIH  C     +    L  ++  +   PN V ++T++D  C+   +  A  
Sbjct: 284 SPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHD 343

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           + ++M  +GV P VVTY +++   C    + +A ++ + M  K   P+  + N LIN YC
Sbjct: 344 VVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYC 403

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           +I     AM +  +M   GL+ D  TY  LIHG C    +  A  L   M+ +G  P   
Sbjct: 404 QIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLV 463

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
           +Y  L+D  C  ++    + LL       L  D+ VY   I   C+  +++ A+ LF+ +
Sbjct: 464 TYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNL 523

Query: 505 QGNG 508
              G
Sbjct: 524 SCQG 527



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 55/244 (22%), Positives = 93/244 (38%), Gaps = 35/244 (14%)

Query: 356 DANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALI 415
           DA    N M      P  V    L+ +  K+   ++ + +  +M   G+  D +T   LI
Sbjct: 95  DALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILI 154

Query: 416 HGFCKAKEMDIAKELLFGML-----------------------------------DAGFS 440
           + FC  + +  A  +L  +L                                     GF 
Sbjct: 155 NSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQ 214

Query: 441 PSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRL 500
           P   +Y  L++G C   N  A ++LL   V +    +V  Y  +I   CK  +V  A  L
Sbjct: 215 PDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNL 274

Query: 501 FNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAK 560
           F+ M   GI  D   Y SL +A     E K  + +L++M   ++M  + ++ +   +  K
Sbjct: 275 FSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCK 334

Query: 561 DNEI 564
           +  I
Sbjct: 335 EGMI 338


>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
 gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
          Length = 569

 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 135/483 (27%), Positives = 238/483 (49%), Gaps = 28/483 (5%)

Query: 63  FFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKI 122
           F K AE    N+     +++ +IH L K +    A  +L  +  R        +N    +
Sbjct: 69  FDKMAELGAVNHT----TYYNLIHPLCKARLLDEAMGLLLDMKSRG-------MNPGTLL 117

Query: 123 HDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAK-DRLT 181
           H+           ++         +  L V+ QM   +  P     T L++ L+K  RL 
Sbjct: 118 HN----------VVIGGLCRAGRLRHALGVYRQMNDAH-PPDFLTYTKLVHGLSKAGRLR 166

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
           D V +V ++MV    V +     V++ + C    VD   +L+ EM  + + A+  TY+ L
Sbjct: 167 DAV-QVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSAL 225

Query: 242 IALYCKKGMHYEALAVQ-DRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGAT 300
           +   CK     EA+A+    + R G +PDIVTY+++I G C+ GR+R+A  +F ++  A 
Sbjct: 226 VDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSCA- 284

Query: 301 PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRL 360
           P  +TY +LI GYCRA D++EA+RL   M      P V+TY +++   CK GR+ DA  L
Sbjct: 285 PTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYEL 344

Query: 361 LNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCK 420
             +M   K++PD VT  +L++  C  G    A+++   +   G     +TY  ++ G+CK
Sbjct: 345 FQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCK 404

Query: 421 AKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG--LCVDV 478
           + ++  A+EL+      GF P+  +Y+ LV G C     +  L+ LD+  S G      V
Sbjct: 405 SNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSV 464

Query: 479 SVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDD 538
           ++Y  ++   C+  + D A + +  M   G +  +  + ++ +A  +A +P+   ++L++
Sbjct: 465 AMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEE 524

Query: 539 MYR 541
           M +
Sbjct: 525 MIK 527



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 130/493 (26%), Positives = 219/493 (44%), Gaps = 47/493 (9%)

Query: 126 PDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVW 185
           P  +S     L   +A+ K+   G  + D++R   L P       +L  L   R T    
Sbjct: 7   PSDSSTFAVVLRGLHASAKLRHLGPLLLDEIRDRGLSPDPVELNTILAELCDARDTTTAM 66

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
            ++ KM +LG V +   YN LIH  CK+  +D+   LL +M+ + +      +N +I   
Sbjct: 67  ALFDKMAELGAVNHTTYYN-LIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGGL 125

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGA--TPNH 303
           C+ G    AL V  +M  +   PD +TY  L+HG  + GR+R+A ++ +++  A   P++
Sbjct: 126 CRAGRLRHALGVYRQMN-DAHPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDN 184

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDA-NRLLN 362
            T T ++   C  + +++A  L E M  +G+    +TY++++  LCK  R+ +A   LL 
Sbjct: 185 TTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLG 244

Query: 363 EMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAK 422
           E+  +   PD VT +T+I+  CK G    A+ +   M  A   +   TY +LI G+C+A 
Sbjct: 245 EVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSCAPTAI---TYNSLIGGYCRAG 301

Query: 423 EMDIAKELLFGMLDAG-----------------------------------FSPSYCSYS 447
           +MD A  LL  M+D                                      SP   +++
Sbjct: 302 DMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFT 361

Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGN 507
            LVDG C +   E  L+LL+E   RG    +  Y  ++  +CK  +V  A+ L    +  
Sbjct: 362 SLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSR 421

Query: 508 GILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRR--RLMITLKIYRSFSASYAKDNEIL 565
           G + ++V Y  L     RAG        LD +         ++ +Y     +  +D    
Sbjct: 422 GFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTD 481

Query: 566 DL--FWSHVVDRG 576
           D   F+  ++ RG
Sbjct: 482 DAVQFYEEMIQRG 494



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 109/394 (27%), Positives = 178/394 (45%), Gaps = 43/394 (10%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           +D +QV  +M     +P     TV++ SL      D   ++ ++M+  G+ AN   Y+ L
Sbjct: 166 RDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSAL 225

Query: 207 IHACCKSSDVDK-VEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
           +   CK   +D+ V  LL E+  +    D+ TY+T+I   CK G   +A+   D  E   
Sbjct: 226 VDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAV---DIFEEMS 282

Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEAL 323
            +P  +TYNSLI G+CR G M EA RL   +      P+ +TYTTL+  +C+   L++A 
Sbjct: 283 CAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAY 342

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
            L + M A  + P VVT+ S++  LC EGR+ DA  LL E+  +   P   T N +++ Y
Sbjct: 343 ELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGY 402

Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGM--------- 434
           CK      A ++       G + +  TY  L+ G C+A   D A + L  +         
Sbjct: 403 CKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPT 462

Query: 435 --------LDA--------------------GFSPSYCSYSWLVDGYCNKNNEEALLKLL 466
                   LDA                    G+ P+  +++ +V   C  +  +   +LL
Sbjct: 463 SVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELL 522

Query: 467 DEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRL 500
           +E +  G         A++  +C+   +  A  L
Sbjct: 523 EEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADEL 556



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 95/317 (29%), Positives = 160/317 (50%), Gaps = 13/317 (4%)

Query: 160 NLMPHLHACTVLLNSLAK-DRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDK 218
              P +   + +++ L K  RL D V  ++++M           YN LI   C++ D+D+
Sbjct: 250 GFTPDIVTYSTVIDGLCKAGRLRDAV-DIFEEM---SCAPTAITYNSLIGGYCRAGDMDE 305

Query: 219 VEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIH 278
             +LL +M   +   D+ TY TL++ +CK G   +A  +  +M    +SPD+VT+ SL+ 
Sbjct: 306 AIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVD 365

Query: 279 GFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYP 336
           G C EGRM +A  L  +I  +G  P   TY  ++DGYC++N + +A  L     ++G  P
Sbjct: 366 GLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVP 425

Query: 337 GVVTYNSILRKLCKEGRIRDANRLLNEMN-EKKIAPDNVTCNTLI-NAYCKIGDTASAMK 394
             VTYN ++   C+ GR   A + L+++N E    P +V    +I +A C+ G T  A++
Sbjct: 426 NTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQ 485

Query: 395 VKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYC 454
               M++ G +    T+  ++   CKA +   A ELL  M+  G +P   +   +V  YC
Sbjct: 486 FYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYC 545

Query: 455 NKNNEEALLKLLDEFVS 471
                  +++  DE  S
Sbjct: 546 RA----GMIQKADELAS 558



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 68/255 (26%), Positives = 128/255 (50%), Gaps = 13/255 (5%)

Query: 119 LVKIHDD---PDGNSHVLSWLVIFYANLKMTQ--DGLQVFDQMRVHNLMPHLHACTVLLN 173
           L K+ DD   PD    V+++  +  A  KM +  D  ++F QM  + L P +   T L++
Sbjct: 310 LGKMVDDNCAPD----VITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVD 365

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
            L  +   +   ++ +++ + G    I+ YN ++   CKS+ V K E+L+ +   +    
Sbjct: 366 GLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVP 425

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREG--ISPDIVTYNSLIHGFCREGRMREARR 291
           +  TYN L+A  C+ G   +AL   D++  EG      +  Y  ++   CR+GR  +A +
Sbjct: 426 NTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQ 485

Query: 292 LFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLC 349
            + ++  +G  P   T+ T++   C+A+  ++A  L E M   G  PG  T ++++   C
Sbjct: 486 FYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYC 545

Query: 350 KEGRIRDANRLLNEM 364
           + G I+ A+ L +E+
Sbjct: 546 RAGMIQKADELASEL 560



 Score = 41.6 bits (96), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 45/274 (16%), Positives = 106/274 (38%), Gaps = 24/274 (8%)

Query: 26  WAKLLNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMI 85
             K+++ N A  + +   +  L++ +  C +  L  A+  + +         + +  +++
Sbjct: 310 LGKMVDDNCAPDVIT---YTTLMSAF--CKMGRLDDAYELFQQMVANKLSPDVVTFTSLV 364

Query: 86  HILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKM 145
             L      + A  +LE+I  R    T    N +V      DG           Y     
Sbjct: 365 DGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVV------DG-----------YCKSNQ 407

Query: 146 TQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG--VVANIHLY 203
            +   ++    R    +P+     +L+    +   TD   +   ++   G     ++ +Y
Sbjct: 408 VRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMY 467

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER 263
            +++ A C+    D   +   EM  +       T+ T++   CK     +A  + + M +
Sbjct: 468 AIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIK 527

Query: 264 EGISPDIVTYNSLIHGFCREGRMREARRLFRDIK 297
            G +P   T ++++  +CR G +++A  L  +++
Sbjct: 528 YGHTPGPGTCDAVVSAYCRAGMIQKADELASELR 561


>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
          Length = 975

 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 118/390 (30%), Positives = 194/390 (49%), Gaps = 4/390 (1%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           S +  ++K+  +P  N+   S L+          + L++ D+M      P L     L+N
Sbjct: 242 SAMGKIIKLGYEP--NTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVN 299

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
            L           +  KMV+ G   N   Y  +++  CKS       +LL +ME ++++ 
Sbjct: 300 GLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKL 359

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           D   Y+ +I   CK G    A  + + ME +GI+ +I+TYN LI GFC  GR  +  +L 
Sbjct: 360 DAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLL 419

Query: 294 RDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
           RD+  +   PN VT++ LID + +   L EA  L + M  +G+ P  +TY S++   CKE
Sbjct: 420 RDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKE 479

Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
             +  AN++++ M  K   P+  T N LIN YCK       +++  +M   G++ D  TY
Sbjct: 480 NHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTY 539

Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
             LI GFC+  ++++AKEL   M+     P+  +Y  L+DG C+    E  L++ ++   
Sbjct: 540 NTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEK 599

Query: 472 RGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
             + +D+ +Y  +I   C   KVD A  LF
Sbjct: 600 SKMELDIGIYNIIIHGMCNASKVDDAWDLF 629



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 113/399 (28%), Positives = 201/399 (50%), Gaps = 2/399 (0%)

Query: 155 QMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSS 214
           QM +  +  +L+  ++++N   + R   + +    K+++LG   N   ++ LI+  C   
Sbjct: 211 QMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEG 270

Query: 215 DVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYN 274
            V +  +L+  M     + DL T NTL+   C  G   EA+ + D+M   G  P+ VTY 
Sbjct: 271 RVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYG 330

Query: 275 SLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAK 332
            +++  C+ G+   A  L R +  +    + V Y+ +IDG C+   L+ A  L   M  K
Sbjct: 331 PVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMK 390

Query: 333 GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
           G+   ++TYN ++   C  GR  D  +LL +M ++KI P+ VT + LI+++ K G    A
Sbjct: 391 GITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREA 450

Query: 393 MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
            ++   M+  G+  D  TY +LI GFCK   +D A +++  M+  G  P+  +++ L++G
Sbjct: 451 EELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILING 510

Query: 453 YCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGD 512
           YC  N  +  L+L  +   RG+  D   Y  LI+ FC+  K++ A+ LF  M    +  +
Sbjct: 511 YCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPN 570

Query: 513 SVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIY 551
            V Y  L       GE +   +I + + + ++ + + IY
Sbjct: 571 IVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIY 609



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 109/396 (27%), Positives = 199/396 (50%), Gaps = 2/396 (0%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           + + + D+M  +   P+      +LN + K   T +  ++ +KM +  +  +   Y+++I
Sbjct: 309 EAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 368

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
              CK   +D    L  EME K +  ++ TYN LI  +C  G   +   +   M +  I+
Sbjct: 369 DGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKIN 428

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
           P++VT++ LI  F +EG++REA  L +++  +G  P+ +TYT+LIDG+C+ N L++A ++
Sbjct: 429 PNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQM 488

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
            ++M +KG  P + T+N ++   CK  RI D   L  +M+ + +  D VT NTLI  +C+
Sbjct: 489 VDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCE 548

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
           +G    A ++   M+   +  +  TYK L+ G C   E + A E+   +  +        
Sbjct: 549 LGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGI 608

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+ ++ G CN +  +    L      +G+   V  Y  +I   CKK  +  A+ LF  M+
Sbjct: 609 YNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKME 668

Query: 506 GNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
            +G   D   Y  L  A+   G+      +++++ R
Sbjct: 669 EDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKR 704



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 110/422 (26%), Positives = 195/422 (46%), Gaps = 40/422 (9%)

Query: 187 VYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYC 246
           +++ M+    +  +  ++ L  A  K+   D V  L  +ME K +  +L+T + +I  +C
Sbjct: 173 LFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFC 232

Query: 247 KKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHV 304
           +      A +   ++ + G  P+ +T+++LI+G C EGR+ EA  L   +   G  P+ +
Sbjct: 233 RCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLI 292

Query: 305 TYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM 364
           T  TL++G C +    EA+ L + M   G  P  VTY  +L  +CK G+   A  LL +M
Sbjct: 293 TINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKM 352

Query: 365 NEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEM 424
            E+ I  D V  + +I+  CK G   +A  + N M   G+  +  TY  LI GFC A   
Sbjct: 353 EERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRW 412

Query: 425 DI-----------------------------------AKELLFGMLDAGFSPSYCSYSWL 449
           D                                    A+EL   M+  G +P   +Y+ L
Sbjct: 413 DDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSL 472

Query: 450 VDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGI 509
           +DG+C +N+ +   +++D  VS+G   ++  +  LI  +CK  ++D    LF  M   G+
Sbjct: 473 IDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGV 532

Query: 510 LGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL---MITLKIYRSFSASYAKDNEILD 566
           + D+V Y +L   +   G+     ++  +M  R++   ++T KI         +  + L+
Sbjct: 533 VADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALE 592

Query: 567 LF 568
           +F
Sbjct: 593 IF 594



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 102/390 (26%), Positives = 185/390 (47%), Gaps = 38/390 (9%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           +++  +M   N+       +++++ L K    D  + ++ +M   G+  NI  YN+LI  
Sbjct: 346 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGG 405

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
            C +   D   KLL +M  + +  ++ T++ LI  + K+G   EA  +   M   GI+PD
Sbjct: 406 FCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPD 465

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLRE 327
            +TY SLI GFC+E  + +A ++   +  KG  PN  T+  LI+GYC+AN +++ L L  
Sbjct: 466 TITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFR 525

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
            M+ +GV    VTYN++++  C+ G++  A  L  EM  +K+ P+ VT   L++  C  G
Sbjct: 526 KMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNG 585

Query: 388 DTASAMKVKNRMLEAGLMLDQF-----------------------------------TYK 412
           ++  A+++  ++ ++ + LD                                     TY 
Sbjct: 586 ESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYN 645

Query: 413 ALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSR 472
            +I G CK   +  A+ L   M + G +P   +Y+ L+  +    +    +KL++E    
Sbjct: 646 IMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRC 705

Query: 473 GLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
           G  VD S  + +I      +K +Y  +  N
Sbjct: 706 GFSVDASTIKMVIDML-SDDKANYFSKYHN 734



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 92/317 (29%), Positives = 148/317 (46%), Gaps = 37/317 (11%)

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           L+  + N     DG ++   M    + P++   +VL++S  K+       +++K+M+  G
Sbjct: 402 LIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRG 461

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
           +  +   Y  LI   CK + +DK  +++  M  K    ++ T+N LI  YCK     + L
Sbjct: 462 IAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGL 521

Query: 256 AVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGY 313
            +  +M   G+  D VTYN+LI GFC  G++  A+ LF+++  +   PN VTY  L+DG 
Sbjct: 522 ELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGL 581

Query: 314 CRANDLEEALRLRE-----------------------------------VMAAKGVYPGV 338
           C   + E+AL + E                                    +  KGV PGV
Sbjct: 582 CDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGV 641

Query: 339 VTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNR 398
            TYN ++  LCK+G + +A  L  +M E   APD  T N LI A+   GD   ++K+   
Sbjct: 642 KTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEE 701

Query: 399 MLEAGLMLDQFTYKALI 415
           +   G  +D  T K +I
Sbjct: 702 LKRCGFSVDASTIKMVI 718



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 61/280 (21%), Positives = 112/280 (40%), Gaps = 35/280 (12%)

Query: 320 EEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTL 379
           ++A+ L   M      P V+ ++ +   + K  +      L  +M  K IA +  T + +
Sbjct: 168 DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIM 227

Query: 380 INAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGF 439
           IN +C+      A     ++++ G   +  T+  LI+G C    +  A EL+  M++ G 
Sbjct: 228 INCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGH 287

Query: 440 SPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG--------------LC---------- 475
            P   + + LV+G C    E   + L+D+ V  G              +C          
Sbjct: 288 KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAME 347

Query: 476 -----------VDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYW 524
                      +D   Y  +I   CK   +D A  LFN M+  GI  + + Y  L   + 
Sbjct: 348 LLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFC 407

Query: 525 RAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
            AG     + +L DM +R++   +  +     S+ K+ ++
Sbjct: 408 NAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKL 447



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/206 (20%), Positives = 89/206 (43%)

Query: 339 VTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNR 398
           ++Y   LR    + +  DA  L  +M   +  P  +  + L +A  K       + +  +
Sbjct: 152 LSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQ 211

Query: 399 MLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNN 458
           M   G+  + +T   +I+ FC+ +++ +A   +  ++  G+ P+  ++S L++G C +  
Sbjct: 212 MELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGR 271

Query: 459 EEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTS 518
               L+L+D  V  G   D+     L+   C   K   A  L + M   G   ++V Y  
Sbjct: 272 VSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGP 331

Query: 519 LAYAYWRAGEPKACSDILDDMYRRRL 544
           +     ++G+     ++L  M  R +
Sbjct: 332 VLNVMCKSGQTALAMELLRKMEERNI 357


>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
 gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
          Length = 554

 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 108/336 (32%), Positives = 177/336 (52%), Gaps = 3/336 (0%)

Query: 232 RADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISP-DIVTYNSLIHGFCREGRMREAR 290
           R D F +N  +      G   EA+ +  RM R+G  P +  +YN +I G  R GR  +A 
Sbjct: 24  RPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAV 83

Query: 291 RLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
            +F ++  +   PNH+TY T+IDG+ +  DLE   RLR+ M   G+ P  +TYN +L  L
Sbjct: 84  EVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGL 143

Query: 349 CKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ 408
           C+ GR+ + + LL+EM  +K+ PD  T + L +   + GD+ + + +  + L+ G+ +  
Sbjct: 144 CRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGD 203

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
           +T   L++G CK  ++ IA+E+L  +++AG  P+   Y+ L++GYC     E       +
Sbjct: 204 YTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQ 263

Query: 469 FVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
             SR +  D   Y ALI   CK E++  AQ L   MQ NG+      + +L  AY R G+
Sbjct: 264 MKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQ 323

Query: 529 PKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
            + C  +L +M    L   +  Y S   ++ K+ +I
Sbjct: 324 LEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKI 359



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 106/409 (25%), Positives = 199/409 (48%), Gaps = 2/409 (0%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D ++VFD+M    ++P+      +++   K    +  +++  +MV  G+  N   YNVL+
Sbjct: 81  DAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLL 140

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
              C++  + +   LL EM  + +  D FTY+ L     + G     L++  +  + G++
Sbjct: 141 SGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVT 200

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
               T + L++G C++G++  A  + + +   G  P  V Y TLI+GYC+  +LE A   
Sbjct: 201 IGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFST 260

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
              M ++ + P  +TYN+++  LCK  RI +A  LL EM +  + P   T NTLI+AY +
Sbjct: 261 FGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGR 320

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            G       V + M E GL  +  +Y ++++ FCK  ++  A  +L  M      P+   
Sbjct: 321 TGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQV 380

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+ ++D Y      +    L+++  S G+   +  Y  LI+  C + ++  A+ + N + 
Sbjct: 381 YNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLS 440

Query: 506 GNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSF 554
            + ++ D+V Y +L  A    G      D+   M++  +  T++ Y   
Sbjct: 441 NHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQL 489



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 104/394 (26%), Positives = 188/394 (47%), Gaps = 2/394 (0%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           + D+M    ++P     ++L + L+++  +  +  ++ K ++ GV    +  ++L++  C
Sbjct: 155 LLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLC 214

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           K   V   E++L  +    +      YNTLI  YC+ G    A +   +M+   I PD +
Sbjct: 215 KDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHI 274

Query: 272 TYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           TYN+LI+G C+  R+  A+ L  +++  G  P   T+ TLID Y R   LE+   +   M
Sbjct: 275 TYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEM 334

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
              G+ P VV+Y SI+   CK G+I +A  +L++M  K + P+    N +I+AY + G  
Sbjct: 335 QENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPN 394

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
             A  +  +M   G+     TY  LI G C   ++  A+E++  + +    P   SY+ L
Sbjct: 395 DQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTL 454

Query: 450 VDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGI 509
           +   C + N +  L L       G+   V  Y  LI       +++  + L+  M  N +
Sbjct: 455 ISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNV 514

Query: 510 LGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRR 543
           +  + I+  +  AY + G      D+  +M ++R
Sbjct: 515 VPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKR 548



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 71/318 (22%), Positives = 142/318 (44%), Gaps = 22/318 (6%)

Query: 35  ASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHF 94
           A  + +  I+  L+N Y  C    L  AF  + +    + K    ++  +I+ L K +  
Sbjct: 232 AGLVPTRVIYNTLINGY--CQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERI 289

Query: 95  KSAQNMLEKIALRDFLSTPSVLNALVKIHD---------------DPDG-NSHVLSWLVI 138
            +AQ++L ++       T    N L+  +                  +G   +V+S+  I
Sbjct: 290 TNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSI 349

Query: 139 FYANLKMTQ--DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGV 196
             A  K  +  + + + D M   +++P+      ++++  +    D  + + +KM   G+
Sbjct: 350 VNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGI 409

Query: 197 VANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALA 256
             +I  YN+LI   C  S + + E+++  +    +  D  +YNTLI+  C +G   +AL 
Sbjct: 410 SPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALD 469

Query: 257 VQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYC 314
           +Q RM + GI   + TY+ LI G    GR+ E   L++ +      P++  +  +++ Y 
Sbjct: 470 LQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYS 529

Query: 315 RANDLEEALRLREVMAAK 332
           +  +  +A  LR+ M  K
Sbjct: 530 KYGNEIKAEDLRKEMLQK 547


>gi|224157081|ref|XP_002337799.1| predicted protein [Populus trichocarpa]
 gi|222869732|gb|EEF06863.1| predicted protein [Populus trichocarpa]
          Length = 367

 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 108/352 (30%), Positives = 184/352 (52%), Gaps = 2/352 (0%)

Query: 170 VLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFK 229
            L+ +  ++ L +  +++   M   G+  ++  YN +I+  CK     + + +L EM   
Sbjct: 6   TLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNI 65

Query: 230 DVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA 289
            +  D  TYNTL+   C++    EA  +   M R+G+ PD+V+++SL+  F R   + +A
Sbjct: 66  GLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHLDQA 125

Query: 290 RRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRK 347
              FRD+K  G  P++V YT L+ GYCR  ++ EAL++R+ M  +G    V+ YN+IL  
Sbjct: 126 LVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNG 185

Query: 348 LCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLD 407
           LCKE  + DA++L +EM E+   PD  T  TLI+ +C+ G+   A+ +   M +  +  D
Sbjct: 186 LCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPD 245

Query: 408 QFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLD 467
              Y  LI GFCK  EM+ A EL  GM+     P++ +Y  L++ YC+  +     +L D
Sbjct: 246 IVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWD 305

Query: 468 EFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
             + +G+   +     +I+ +C+      A      M   G+  D + Y +L
Sbjct: 306 VMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTL 357



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 101/352 (28%), Positives = 178/352 (50%), Gaps = 4/352 (1%)

Query: 235 LFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR 294
           + TYNTLI  YC++G+  EA  + + M  +G+ P + TYN++I+G C++GR   A+ +  
Sbjct: 1   MVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI 60

Query: 295 DI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEG 352
           ++   G +P+  TY TL+   CR ++  EA  +   M  +GV P +V+++S++    +  
Sbjct: 61  EMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNR 120

Query: 353 RIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYK 412
            +  A     +M +  + PDNV    L++ YC+ G+   A+K+++ MLE G +LD   Y 
Sbjct: 121 HLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYN 180

Query: 413 ALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSR 472
            +++G CK K +  A +L   M++ G  P + +++ L+ G+C   N    L L      R
Sbjct: 181 TILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQR 240

Query: 473 GLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKAC 532
            +  D+  Y  LI  FCK  +++ A  L++ M    I  + + Y  L  AY   G     
Sbjct: 241 NIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEA 300

Query: 533 SDILDDMYRRRLMITLKIYRSFSASYAK--DNEILDLFWSHVVDRGLMSKHI 582
             + D M  + +  TL    +    Y +  D+   D F   ++ +G+   HI
Sbjct: 301 FRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHI 352



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 92/353 (26%), Positives = 176/353 (49%), Gaps = 37/353 (10%)

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           L+  Y    + ++  ++ + M    L P L     ++N L K         +  +M+ +G
Sbjct: 7   LIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIG 66

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIAL----------- 244
           +  +   YN L+   C+  +  + +++  EM  + V  DL ++++L+A+           
Sbjct: 67  LSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHLDQAL 126

Query: 245 ------------------------YCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGF 280
                                   YC+ G   EAL ++D M  +G   D++ YN++++G 
Sbjct: 127 VYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGL 186

Query: 281 CREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGV 338
           C+E  + +A +LF ++  +GA P+  T+TTLI G+C+  ++ +AL L   M  + + P +
Sbjct: 187 CKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDI 246

Query: 339 VTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNR 398
           V YN+++   CK G +  A+ L + M  +KI P+++T   LINAYC +G  + A ++ + 
Sbjct: 247 VAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDV 306

Query: 399 MLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVD 451
           M+E G+     T   +I G+C++ +   A E L  M+  G +P + SY+ L++
Sbjct: 307 MIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLIN 359



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 85/250 (34%), Positives = 136/250 (54%), Gaps = 3/250 (1%)

Query: 134 SWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQ 193
           S + +F  N  + Q  L  F  M+   L+P     TVL++   ++       K+  +M++
Sbjct: 111 SLMAVFSRNRHLDQ-ALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLE 169

Query: 194 LGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYE 253
            G V ++  YN +++  CK   +   +KL  EM  +    D +T+ TLI  +C+ G   +
Sbjct: 170 QGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTK 229

Query: 254 ALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLID 311
           AL++   M +  I PDIV YN+LI GFC+ G M +A  L+  +  +   PNH+TY  LI+
Sbjct: 230 ALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILIN 289

Query: 312 GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAP 371
            YC    + EA RL +VM  KG+ P +VT N++++  C+ G    A+  L  M  K +AP
Sbjct: 290 AYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAP 349

Query: 372 DNVTCNTLIN 381
           D+++ NTLIN
Sbjct: 350 DHISYNTLIN 359


>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
 gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
 gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 634

 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 117/401 (29%), Positives = 205/401 (51%), Gaps = 2/401 (0%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
            + + + D+M      P+L    V++N L K   TD+   +  KM    + A++ ++N +
Sbjct: 207 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTI 266

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           I + CK   VD    L  EME K +R ++ TY++LI+  C  G   +A  +   M  + I
Sbjct: 267 IDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 326

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
           +P++VT+N+LI  F +EG+  EA +L+ D+  +   P+  TY +L++G+C  + L++A +
Sbjct: 327 NPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQ 386

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           + E M +K  +P VVTYN++++  CK  R+ D   L  EM+ + +  D VT  TLI    
Sbjct: 387 MFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLF 446

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
             GD  +A KV  +M+  G+  D  TY  L+ G C   +++ A E+   M  +       
Sbjct: 447 HDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIY 506

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
            Y+ +++G C     +    L      +G+  +V  Y  +I   C K  +  A  L   M
Sbjct: 507 IYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKM 566

Query: 505 QGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
           + +G L +S  Y +L  A+ R G+  A ++++ +M   R +
Sbjct: 567 KEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFV 607



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 134/463 (28%), Positives = 222/463 (47%), Gaps = 40/463 (8%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D + +F  M     +P +     LL+++AK +  D+V  + +KM +L +V  ++ YN+LI
Sbjct: 68  DAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILI 127

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           +  C+ S +     LL +M        + T ++L+  YC      +A+A+ D+M   G  
Sbjct: 128 NCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYR 187

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRAND------- 318
           PD +T+ +LIHG     +  EA  L   +  +G  PN VTY  +++G C+  D       
Sbjct: 188 PDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNL 247

Query: 319 ----------------------------LEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
                                       +++AL L + M  KG+ P VVTY+S++  LC 
Sbjct: 248 LNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCS 307

Query: 351 EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
            GR  DA++LL++M EKKI P+ VT N LI+A+ K G    A K+ + M++  +  D FT
Sbjct: 308 YGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFT 367

Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFV 470
           Y +L++GFC    +D AK++   M+     P   +Y+ L+ G+C     E   +L  E  
Sbjct: 368 YNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMS 427

Query: 471 SRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPK 530
            RGL  D   Y  LI+        D AQ++F  M  +G+  D + Y+ L       G+ +
Sbjct: 428 HRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLE 487

Query: 531 ACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI---LDLFWS 570
              ++ D M +  + + + IY +      K  ++    DLF S
Sbjct: 488 KALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCS 530



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 126/408 (30%), Positives = 195/408 (47%), Gaps = 4/408 (0%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           ++L  ++K+  +P  +   LS L+  Y + K   D + + DQM      P     T L++
Sbjct: 141 ALLGKMMKLGYEP--SIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIH 198

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
            L           +  +MVQ G   N+  Y V+++  CK  D D    LL +ME   + A
Sbjct: 199 GLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEA 258

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           D+  +NT+I   CK     +AL +   ME +GI P++VTY+SLI   C  GR  +A +L 
Sbjct: 259 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 318

Query: 294 RDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
            D+  K   PN VT+  LID + +     EA +L + M  + + P + TYNS++   C  
Sbjct: 319 SDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMH 378

Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
            R+  A ++   M  K   PD VT NTLI  +CK        ++   M   GL+ D  TY
Sbjct: 379 DRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTY 438

Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
             LI G     + D A+++   M+  G  P   +YS L+DG CN    E  L++ D    
Sbjct: 439 TTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK 498

Query: 472 RGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
             + +D+ +Y  +I   CK  KVD    LF  +   G+  + V Y ++
Sbjct: 499 SEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTM 546



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 132/502 (26%), Positives = 231/502 (46%), Gaps = 37/502 (7%)

Query: 19  AIMLKGHWAKL-LNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHS 77
           A+ L G   KL   P+I + L+S      LLN Y  CH   +S A     +     Y+  
Sbjct: 139 ALALLGKMMKLGYEPSIVT-LSS------LLNGY--CHGKRISDAVALVDQMVEMGYRPD 189

Query: 78  LQSHWTMIHILTKNKHFKSAQNMLEKIALR----DFLSTPSVLNALVKIHDDPDGNSHVL 133
             +  T+IH L  +     A  +++++  R    + ++   V+N L K  D         
Sbjct: 190 TITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD--------- 240

Query: 134 SWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQ 193
                       T   L + ++M    +   +     +++SL K R  D    ++K+M  
Sbjct: 241 ------------TDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMET 288

Query: 194 LGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYE 253
            G+  N+  Y+ LI   C         +LL +M  K +  +L T+N LI  + K+G   E
Sbjct: 289 KGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVE 348

Query: 254 ALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLID 311
           A  + D M +  I PDI TYNSL++GFC   R+ +A+++F  +  K   P+ VTY TLI 
Sbjct: 349 AEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIK 408

Query: 312 GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAP 371
           G+C++  +E+   L   M+ +G+    VTY ++++ L  +G   +A ++  +M    + P
Sbjct: 409 GFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPP 468

Query: 372 DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
           D +T + L++  C  G    A++V + M ++ + LD + Y  +I G CKA ++D   +L 
Sbjct: 469 DIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLF 528

Query: 432 FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
             +   G  P+  +Y+ ++ G C+K   +    LL +    G   +   Y  LIR   + 
Sbjct: 529 CSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRD 588

Query: 492 EKVDYAQRLFNLMQGNGILGDS 513
                +  L   M+    +GD+
Sbjct: 589 GDKAASAELIREMRSCRFVGDA 610



 Score =  112 bits (279), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 67/233 (28%), Positives = 109/233 (46%), Gaps = 2/233 (0%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           Q+F+ M   +  P +     L+    K +  +   +++++M   G+V +   Y  LI   
Sbjct: 386 QMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL 445

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
               D D  +K+  +M    V  D+ TY+ L+   C  G   +AL V D M++  I  DI
Sbjct: 446 FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI 505

Query: 271 VTYNSLIHGFCREGRMREARRLF--RDIKGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
             Y ++I G C+ G++ +   LF    +KG  PN VTY T+I G C    L+EA  L + 
Sbjct: 506 YIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKK 565

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
           M   G  P   TYN+++R   ++G    +  L+ EM   +   D  T   + N
Sbjct: 566 MKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVAN 618



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 65/283 (22%), Positives = 116/283 (40%), Gaps = 35/283 (12%)

Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT 378
           L++A+ L   M      P +V +N +L  + K  +      L  +M   +I     T N 
Sbjct: 66  LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNI 125

Query: 379 LINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAG 438
           LIN +C+    + A+ +  +M++ G      T  +L++G+C  K +  A  L+  M++ G
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185

Query: 439 FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSR--------------GLC--------- 475
           + P   +++ L+ G    N     + L+D  V R              GLC         
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 245

Query: 476 ------------VDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAY 523
                        DV ++  +I   CK   VD A  LF  M+  GI  + V Y+SL    
Sbjct: 246 NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 305

Query: 524 WRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
              G     S +L DM  +++   L  + +   ++ K+ + ++
Sbjct: 306 CSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVE 348



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 61/254 (24%), Positives = 109/254 (42%), Gaps = 12/254 (4%)

Query: 337 GVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVK 396
           G   Y  ILR    + ++ DA  L   M + +  P  V  N L++A  K+      + + 
Sbjct: 49  GSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLG 108

Query: 397 NRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNK 456
            +M    ++   +TY  LI+ FC+  ++ +A  LL  M+  G+ PS  + S L++GYC+ 
Sbjct: 109 EKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHG 168

Query: 457 NNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIY 516
                 + L+D+ V  G   D   +  LI       K   A  L + M   G   + V Y
Sbjct: 169 KRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTY 228

Query: 517 TSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRG 576
             +     + G+     ++L+ M   ++   + I+ +   S  K        + HV D  
Sbjct: 229 GVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCK--------YRHVDD-- 278

Query: 577 LMSKHIFKEMQLRN 590
             + ++FKEM+ + 
Sbjct: 279 --ALNLFKEMETKG 290


>gi|224136626|ref|XP_002322376.1| predicted protein [Populus trichocarpa]
 gi|222869372|gb|EEF06503.1| predicted protein [Populus trichocarpa]
          Length = 715

 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 131/493 (26%), Positives = 233/493 (47%), Gaps = 25/493 (5%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDD------- 125
           N++ + +    M+ +  +   F+ A NM+ ++     + T   LN +  +  +       
Sbjct: 156 NFERAHEVMDCMVRVFAEIGKFQEAVNMVIEMENHGLVLTVRTLNCVTGVAGEMGLVGYA 215

Query: 126 -------------PDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLL 172
                        PD  S+ L  + I Y  +    D  +    M     +     CT+++
Sbjct: 216 ENVFDEMRVRGVCPDSVSYKL--MAIAYCRMGRISDTDRWLKDMVRRGFVVDNATCTLMI 273

Query: 173 NSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVR 232
           ++  +      V+  + K V+LG+  N+  +  LI+  CK   + +  ++L EM  K  +
Sbjct: 274 STFCEKGFASRVFWYFDKWVELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWK 333

Query: 233 ADLFTYNTLIALYCKKGMHYEALAVQDRMER-EGISPDIVTYNSLIHGFCREGRMREARR 291
            +++T+  LI   CKKG   +A  +  ++ R +   P++ TY S+IHG+C+E ++  A  
Sbjct: 334 PNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAEM 393

Query: 292 LFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLC 349
           L   +K  G  PN  TYT LIDG+ +A + E+A  L ++M  +G    + TYN+ +  LC
Sbjct: 394 LLSRMKEQGLVPNTKTYTCLIDGHSKAGNFEKAYELMDLMGKEGFSANIFTYNAFIDSLC 453

Query: 350 KEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQF 409
           K+GR  +A +LL +     +  D VT   LI+  C+  DT  A+   ++M +AG+  D  
Sbjct: 454 KKGRFLEACKLLKKGFRLGLQADTVTYTILISELCRRADTREALVFFSKMFKAGVQPDMH 513

Query: 410 TYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEF 469
           TY  LI  F + + M+ +++L    +  G  P+  +Y+ ++ GYC   N    LK  +  
Sbjct: 514 TYNTLIAAFSRQRRMEESEKLFAEAVGLGLVPTKETYTSMICGYCRDRNVSLALKFFNRM 573

Query: 470 VSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEP 529
              G   D   Y ALI   CK+ K+D A +L+  M   G+    V   +LAY Y +  + 
Sbjct: 574 SDHGCTPDSLTYGALISGLCKESKLDEACQLYEAMVDKGLSPCEVTRLTLAYEYCKQDDS 633

Query: 530 KACSDILDDMYRR 542
                IL+ + ++
Sbjct: 634 ATAMVILERLDKK 646



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 112/392 (28%), Positives = 190/392 (48%), Gaps = 6/392 (1%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG-VVANIHLYNV 205
           +   ++ ++M      P+++  T L++ L K   T+  ++++ K+V+      N+H Y  
Sbjct: 318 KQAFEMLEEMVKKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDDYKPNVHTYTS 377

Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
           +IH  CK   +++ E LL  M+ + +  +  TY  LI  + K G   +A  + D M +EG
Sbjct: 378 MIHGYCKEDKLNRAEMLLSRMKEQGLVPNTKTYTCLIDGHSKAGNFEKAYELMDLMGKEG 437

Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEAL 323
            S +I TYN+ I   C++GR  EA +L +     G   + VTYT LI   CR  D  EAL
Sbjct: 438 FSANIFTYNAFIDSLCKKGRFLEACKLLKKGFRLGLQADTVTYTILISELCRRADTREAL 497

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
                M   GV P + TYN+++    ++ R+ ++ +L  E     + P   T  ++I  Y
Sbjct: 498 VFFSKMFKAGVQPDMHTYNTLIAAFSRQRRMEESEKLFAEAVGLGLVPTKETYTSMICGY 557

Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY 443
           C+  + + A+K  NRM + G   D  TY ALI G CK  ++D A +L   M+D G SP  
Sbjct: 558 CRDRNVSLALKFFNRMSDHGCTPDSLTYGALISGLCKESKLDEACQLYEAMVDKGLSPCE 617

Query: 444 CSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNL 503
            +   L   YC +++    + +L+    +   + +     LIR+ C + KV  A   F+ 
Sbjct: 618 VTRLTLAYEYCKQDDSATAMVILERLDKK---LWIRTVNTLIRKLCSERKVGMAVLFFHK 674

Query: 504 MQGNGILGDSVIYTSLAYAYWRAGEPKACSDI 535
           +       D V  T+   A + + +    SD+
Sbjct: 675 LLDKDQNVDRVTLTAFTTACYESNKYALVSDL 706



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 110/395 (27%), Positives = 170/395 (43%), Gaps = 11/395 (2%)

Query: 190 KMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKG 249
           +M   G+V  +   N +     +   V   E +  EM  + V  D  +Y  +   YC+ G
Sbjct: 186 EMENHGLVLTVRTLNCVTGVAGEMGLVGYAENVFDEMRVRGVCPDSVSYKLMAIAYCRMG 245

Query: 250 MHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK-----GATPNHV 304
              +       M R G   D  T   +I  FC +G    A R+F         G  PN +
Sbjct: 246 RISDTDRWLKDMVRRGFVVDNATCTLMISTFCEKGF---ASRVFWYFDKWVELGLKPNLI 302

Query: 305 TYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRL-LNE 363
            +T+LI+G C+   +++A  + E M  KG  P V T+ +++  LCK+G    A RL L  
Sbjct: 303 NFTSLINGLCKRGSIKQAFEMLEEMVKKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKL 362

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
           +      P+  T  ++I+ YCK      A  + +RM E GL+ +  TY  LI G  KA  
Sbjct: 363 VRSDDYKPNVHTYTSMIHGYCKEDKLNRAEMLLSRMKEQGLVPNTKTYTCLIDGHSKAGN 422

Query: 424 MDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRA 483
            + A EL+  M   GFS +  +Y+  +D  C K       KLL +    GL  D   Y  
Sbjct: 423 FEKAYELMDLMGKEGFSANIFTYNAFIDSLCKKGRFLEACKLLKKGFRLGLQADTVTYTI 482

Query: 484 LIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRR 543
           LI   C++     A   F+ M   G+  D   Y +L  A+ R    +    +  +     
Sbjct: 483 LISELCRRADTREALVFFSKMFKAGVQPDMHTYNTLIAAFSRQRRMEESEKLFAEAVGLG 542

Query: 544 LMITLKIYRSFSASYAKDNEI-LDL-FWSHVVDRG 576
           L+ T + Y S    Y +D  + L L F++ + D G
Sbjct: 543 LVPTKETYTSMICGYCRDRNVSLALKFFNRMSDHG 577


>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
          Length = 740

 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 143/507 (28%), Positives = 242/507 (47%), Gaps = 28/507 (5%)

Query: 48  LNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHW--------TMIHILTKNKHFKSAQN 99
            +LY+C  +  +  A F+  E A   YK  L S          T+I+IL+K    + A+ 
Sbjct: 161 FSLYSCNTL-LIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAEL 219

Query: 100 MLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVH 159
           +L +I   D   +P V                  + L++ +   +       VFD+M   
Sbjct: 220 ILSQIFQYDL--SPDVF---------------TYTSLILGHCRNRNLDLAFGVFDRMVKE 262

Query: 160 NLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKV 219
              P+    + L+N L  +   D    + ++M++ G+   ++ Y + I A C     ++ 
Sbjct: 263 GCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEA 322

Query: 220 EKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHG 279
            +L+  M+ +  R ++ TY  LI+   + G    A+ +  +M +EG+ P+ VTYN+LI+ 
Sbjct: 323 IELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINE 382

Query: 280 FCREGRMREARRLFR--DIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPG 337
            C  GR   A ++F   +  G+  N  TY  +I G C   D+E+A+ L E M   G  P 
Sbjct: 383 LCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPT 442

Query: 338 VVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKN 397
           VVTYN+++     +G + +A RLL+ M E    PD  T N L++ + K G   SA     
Sbjct: 443 VVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQ 502

Query: 398 RMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKN 457
            M+E GL  +  +Y ALI G  K  ++DIA  LL  M + G +P+  SY+ +++G   +N
Sbjct: 503 EMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKEN 562

Query: 458 NEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYT 517
                 K+ D+ V +GL  +V  Y  LI   C+  +  +A ++F+ M+    L +   Y+
Sbjct: 563 RFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYS 622

Query: 518 SLAYAYWRAGEPKACSDILDDMYRRRL 544
           SL Y   + G+      +L +M R+ L
Sbjct: 623 SLIYGLCQEGKADEAEILLKEMERKGL 649



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 147/532 (27%), Positives = 237/532 (44%), Gaps = 41/532 (7%)

Query: 63  FFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNM--LEKIALRDFLSTPSVLNALV 120
           FF W  S  P YKH++    +M++ L +++ F  A ++  L   A R+      V + L 
Sbjct: 94  FFYWI-SKRPFYKHNMNCFISMLNRLVRDRVFAPADHIRILMIKACRNEEEIRRVADFLN 152

Query: 121 KIHDDPDGNS-HVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAK-- 177
           +I     G S +  + L+I  A  +M +    ++ QM    + P L     L+N L+K  
Sbjct: 153 EISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKG 212

Query: 178 ---------------------------------DRLTDMVWKVYKKMVQLGVVANIHLYN 204
                                            +R  D+ + V+ +MV+ G   N   Y+
Sbjct: 213 KVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYS 272

Query: 205 VLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMERE 264
            LI+  C    VD+   +L EM  K +   ++TY   I   C      EA+ +  RM++ 
Sbjct: 273 TLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKR 332

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEA 322
           G  P++ TY +LI G  R G++  A  L+  +  +G  PN VTY  LI+  C       A
Sbjct: 333 GCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTA 392

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
           L++   M   G      TYN I++ LC  G I  A  L  +M +    P  VT NTLIN 
Sbjct: 393 LKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLING 452

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           Y   G+  +A ++ + M E G   D++TY  L+ GF K  +++ A      M++ G +P+
Sbjct: 453 YLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPN 512

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             SY+ L+DG+      +  L LL      G   +V  Y A+I    K+ +   A+++ +
Sbjct: 513 PVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICD 572

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSF 554
            M   G+L + + YT+L     R G  +    I  DM +R+ +  L  Y S 
Sbjct: 573 KMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSL 624



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 127/422 (30%), Positives = 208/422 (49%), Gaps = 4/422 (0%)

Query: 165 LHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLC 224
           L++C  LL  LAK  + +    +YK+M+  G+  ++  +N LI+   K   V + E +L 
Sbjct: 163 LYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILS 222

Query: 225 EMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREG 284
           ++   D+  D+FTY +LI  +C+      A  V DRM +EG  P+ VTY++LI+G C EG
Sbjct: 223 QIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEG 282

Query: 285 RMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYN 342
           R+ EA  +  ++  KG  P   TYT  I   C     EEA+ L   M  +G  P V TY 
Sbjct: 283 RVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYT 342

Query: 343 SILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEA 402
           +++  L + G++  A  L ++M ++ + P+ VT N LIN  C  G  ++A+K+ + M   
Sbjct: 343 ALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGH 402

Query: 403 GLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEAL 462
           G + +  TY  +I G C   +++ A  L   ML  G  P+  +Y+ L++GY  K N    
Sbjct: 403 GSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNA 462

Query: 463 LKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYA 522
            +LLD     G   D   Y  L+  F K  K++ A   F  M   G+  + V YT+L   
Sbjct: 463 ARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDG 522

Query: 523 YWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDL--FWSHVVDRGLMSK 580
           + + G+      +L  M        ++ Y +     +K+N   +       +V++GL+  
Sbjct: 523 HSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPN 582

Query: 581 HI 582
            I
Sbjct: 583 VI 584



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 109/378 (28%), Positives = 185/378 (48%), Gaps = 3/378 (0%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N    + L+   + L   +  + ++ +M    L+P+      L+N L          K++
Sbjct: 337 NVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIF 396

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
             M   G +AN   YN +I   C   D++K   L  +M        + TYNTLI  Y  K
Sbjct: 397 HWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTK 456

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTY 306
           G    A  + D M+  G  PD  TYN L+ GF + G++  A   F+++   G  PN V+Y
Sbjct: 457 GNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSY 516

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
           T LIDG+ +   ++ AL L + M   G  P V +YN+++  L KE R  +A ++ ++M E
Sbjct: 517 TALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVE 576

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
           + + P+ +T  TLI+  C+ G T  A K+ + M +   + + +TY +LI+G C+  + D 
Sbjct: 577 QGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADE 636

Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
           A+ LL  M   G +P   +++ L+DG+      +    LL   V  G   +   Y  L++
Sbjct: 637 AEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYRTYSVLLK 696

Query: 487 RFCKKEKVDYAQRLFNLM 504
              +KE +   +++F L+
Sbjct: 697 GL-QKECLLLEEKIFPLV 713



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 135/526 (25%), Positives = 229/526 (43%), Gaps = 17/526 (3%)

Query: 44  HKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEK 103
           H  +L   N    P +S  F      AVP  +   Q+  + +  +     +K +  + + 
Sbjct: 16  HSSVLGFLNFSSKPHISSHF------AVPASREPFQAIVSRVCAILSRVQWKGSSELKQ- 68

Query: 104 IALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLV--IFYA-NLKMTQDGLQVFDQMRVHN 160
             L   L    V   +V +H D +       W+    FY  N+      L    + RV  
Sbjct: 69  --LSPQLKAHHVAE-IVAVHKDTESVIQFFYWISKRPFYKHNMNCFISMLNRLVRDRV-- 123

Query: 161 LMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVE 220
             P  H   +++ +   +     V     ++  +G   +++  N L+    K   V+   
Sbjct: 124 FAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGAR 183

Query: 221 KLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGF 280
            L  +M    ++  L T+NTLI +  KKG   EA  +  ++ +  +SPD+ TY SLI G 
Sbjct: 184 NLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGH 243

Query: 281 CREGRMREARRLF-RDIK-GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGV 338
           CR   +  A  +F R +K G  PN VTY+TLI+G C    ++EAL + E M  KG+ P V
Sbjct: 244 CRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTV 303

Query: 339 VTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNR 398
            TY   +  LC      +A  L+  M ++   P+  T   LI+   ++G    A+ + ++
Sbjct: 304 YTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHK 363

Query: 399 MLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNN 458
           ML+ GL+ +  TY ALI+  C       A ++   M   G   +  +Y+ ++ G C   +
Sbjct: 364 MLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGD 423

Query: 459 EEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTS 518
            E  + L ++ +  G    V  Y  LI  +  K  V+ A RL +LM+ NG   D   Y  
Sbjct: 424 IEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNE 483

Query: 519 LAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
           L   + + G+ ++ S    +M    L      Y +    ++KD ++
Sbjct: 484 LVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKV 529


>gi|357485117|ref|XP_003612846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355514181|gb|AES95804.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 892

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 116/440 (26%), Positives = 209/440 (47%), Gaps = 4/440 (0%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           ++  ++ +    P++      +  L K  L  + W++ + + +     N H +N +I+  
Sbjct: 231 EILGKIYMSGETPNVVTYGTYIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGL 290

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           C+   +D+  ++  EM+   +  D+++Y+ LI  +C+KG   +A  V   M   GI P+I
Sbjct: 291 CQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNI 350

Query: 271 VTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREV 328
            +Y+ LI GFC+EGR+ +A  +F ++K  G  P+  +Y+ LIDG+CR  D++ A++  E 
Sbjct: 351 YSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEE 410

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M +    P    Y S+++   K  +  +A +    M +  + PD + CN +++ YC+  D
Sbjct: 411 MTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPD 470

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
              A+ +  +  E G+  + ++Y   IH  C+    + A +LL  ML     P   +YS 
Sbjct: 471 FNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYST 530

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG 508
           L+  +  + N E  + L  +    G+  +V  Y  LI  F    K+D A RLF  M+ + 
Sbjct: 531 LISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKESR 590

Query: 509 ILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAK--DNEILD 566
           +  D + YTSL   +   GE      + D+M R      +  Y  F   Y K   N    
Sbjct: 591 VYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFINEYLKLNKNNQAH 650

Query: 567 LFWSHVVDRGLMSKHIFKEM 586
             +  + +RG+    I   M
Sbjct: 651 KLYEKMKERGVYPDQILYTM 670



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 118/438 (26%), Positives = 213/438 (48%), Gaps = 3/438 (0%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N+H  + ++       +  +  +VF +M+   ++P +++ ++L++   +    D   +V+
Sbjct: 279 NNHCFNAVIYGLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVF 338

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
           K+M   G++ NI+ Y++LI   CK   VDK  ++  EM+   +  D+++Y+ LI  +C+K
Sbjct: 339 KEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRK 398

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTY 306
           G    A+   + M     SP    Y SLI G+ +  +   A + FR ++  G  P+ +  
Sbjct: 399 GDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIAC 458

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
             ++  YCR  D  +AL L E     GV+    +YN  + ++C+      A +LL  M +
Sbjct: 459 NHILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLK 518

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
           + + PD V  +TLI+ + K  ++  A+ +  +M + G+  +  TY  LI+ F    +MD+
Sbjct: 519 RNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDV 578

Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
           A  L  GM ++   P   +Y+ LV G+CN         L DE    G   +V  Y   I 
Sbjct: 579 AYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFIN 638

Query: 487 RFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRR-RLM 545
            + K  K + A +L+  M+  G+  D ++YT L  A+   GE      + D+M +  R  
Sbjct: 639 EYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMNRAEALFDEMKQEGRCT 698

Query: 546 ITLKIYRSFSASYAKDNE 563
             + +Y     SY K N+
Sbjct: 699 PNVVMYTCLINSYIKLNK 716



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 100/379 (26%), Positives = 183/379 (48%), Gaps = 25/379 (6%)

Query: 156 MRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSD 215
           +++H     +++ ++++++ A   L  M W+V+           I + +++     ++ D
Sbjct: 76  VQIHGFENSINSFSIIIHTYA---LAGMSWEVF-----------ILIRDIVTFYKEENRD 121

Query: 216 VDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNS 275
             ++  LL ++E  +V  D+     LI ++    M   A  V  R + +GI  +I++ N 
Sbjct: 122 AGELVSLLLDVEKSNVVFDM-----LIKVFASNSMLEHANYVFVRAKDDGIELNIMSCNF 176

Query: 276 LIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCR----ANDLEEALRLREVM 329
           L+     + R+   R LF  +   G  PN  TYT +++ +CR    + D+  A  +   +
Sbjct: 177 LLKCLVEDNRVDGVRLLFEVLIKFGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEILGKI 236

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
              G  P VVTY + ++ LCK G    A RL+  +  K    +N   N +I   C+ G  
Sbjct: 237 YMSGETPNVVTYGTYIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGIL 296

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
             A +V   M  +G++ D ++Y  LI GFC+   +D A E+   M ++G  P+  SYS L
Sbjct: 297 DEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSIL 356

Query: 450 VDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGI 509
           +DG+C +   +  L++ +E  + G+  DV  Y  LI  FC+K  +D A + +  M  N  
Sbjct: 357 IDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNF 416

Query: 510 LGDSVIYTSLAYAYWRAGE 528
              +  Y SL   Y+++ +
Sbjct: 417 SPSAFNYCSLIKGYYKSKQ 435



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 87/307 (28%), Positives = 137/307 (44%), Gaps = 38/307 (12%)

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           L+  Y   K   + L+ F  M+   + P   AC  +L+   +    +    + +K  + G
Sbjct: 426 LIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENG 485

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
           V  N + YN  IH  C+ S  +K  +LL  M  ++V  D+  Y+TLI+ + K+    +A+
Sbjct: 486 VHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAV 545

Query: 256 AVQDRMEREGIS-----------------------------------PDIVTYNSLIHGF 280
            +  +M + GI+                                   PD + Y SL+ GF
Sbjct: 546 MLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGF 605

Query: 281 CREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGV 338
           C  G M  AR LF ++  +G +PN VTYT  I+ Y + N   +A +L E M  +GVYP  
Sbjct: 606 CNTGEMTRARALFDEMSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQ 665

Query: 339 VTYNSILRKLCKEGRIRDANRLLNEM-NEKKIAPDNVTCNTLINAYCKIGDTASAMKVKN 397
           + Y  ++   C  G +  A  L +EM  E +  P+ V    LIN+Y K+     A K+  
Sbjct: 666 ILYTMLIAAFCNTGEMNRAEALFDEMKQEGRCTPNVVMYTCLINSYIKLNKRDQAEKLYE 725

Query: 398 RMLEAGL 404
            M   GL
Sbjct: 726 EMRAKGL 732



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 48/253 (18%), Positives = 104/253 (41%), Gaps = 16/253 (6%)

Query: 339 VTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNR 398
           V ++ +++       +  AN +     +  I  + ++CN L+    +         +   
Sbjct: 137 VVFDMLIKVFASNSMLEHANYVFVRAKDDGIELNIMSCNFLLKCLVEDNRVDGVRLLFEV 196

Query: 399 MLEAGLMLDQFTYKALIHGFCKAK--EMDI--AKELLFGMLDAGFSPSYCSYSWLVDGYC 454
           +++ G   +  TY  +++ FC+     +DI  A E+L  +  +G +P+  +Y   + G C
Sbjct: 197 LIKFGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEILGKIYMSGETPNVVTYGTYIKGLC 256

Query: 455 NKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSV 514
                    +L+     +   ++   + A+I   C+   +D A  +F  M+ +GIL D  
Sbjct: 257 KVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSGILPDVY 316

Query: 515 IYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVD 574
            Y+ L   + R G     S++  +M    ++  +  Y      + K+           VD
Sbjct: 317 SYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGR---------VD 367

Query: 575 RGLMSKHIFKEMQ 587
           + L    +F+EM+
Sbjct: 368 KAL---EVFEEMK 377


>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
          Length = 1219

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 125/465 (26%), Positives = 218/465 (46%), Gaps = 42/465 (9%)

Query: 146 TQDGLQVFDQMR--VHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLY 203
           +Q+ L++   M     +  P + + T ++N   K+   D  +  Y +M+  G++ N+  Y
Sbjct: 178 SQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTY 237

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER 263
           + +I A CK+  +DK  ++L  M    V  +  TYN+++  YC  G   EA+    +M  
Sbjct: 238 SSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHS 297

Query: 264 EGISPDIVTYNSLIHGFCREGRMREARRLF-----RDIK--------------------- 297
           +G+ PD+VTYNSL+   C+ GR  EAR++F     R +K                     
Sbjct: 298 DGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVE 357

Query: 298 -----------GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILR 346
                      G  PNH  ++ LI  Y +   +++A+ +   M  +G+ P  VTY +++ 
Sbjct: 358 MHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIG 417

Query: 347 KLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLML 406
            LCK GR+ DA R   +M +++++P N+  N+LI++ C       A ++   ML+ G+ L
Sbjct: 418 ILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICL 477

Query: 407 DQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLL 466
           D   + ++I   CK   +  +++L   M+  G  P   +YS L+DGYC     +   KLL
Sbjct: 478 DTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLL 537

Query: 467 DEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRA 526
              VS G+  D   Y  LI  +CK  +++ A  LF  M+ +G+  D + Y  +    ++ 
Sbjct: 538 ASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQT 597

Query: 527 GEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDN---EILDLF 568
               A  ++   +      + L  Y        K+N   E L +F
Sbjct: 598 RRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMF 642



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 123/440 (27%), Positives = 205/440 (46%), Gaps = 40/440 (9%)

Query: 167 ACTVLLNSLAKD-RLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCE 225
           A T LL  L  D R +D +  V ++M QLG + N+  YN+L+   C  +   +  +LL  
Sbjct: 128 AFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQM 187

Query: 226 M--EFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCRE 283
           M  +  D   D+ +Y T+I  + K+G   +A      M   GI P++VTY+S+I   C+ 
Sbjct: 188 MPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKA 247

Query: 284 GRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTY 341
             M +A  +   +   G  PN  TY +++ GYC +   +EA+   + M + GV P VVTY
Sbjct: 248 QAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTY 307

Query: 342 NSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN-------------------- 381
           NS++  LCK GR  +A ++ + M ++ + P+  T  TL+                     
Sbjct: 308 NSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVR 367

Query: 382 ---------------AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
                          AY K G    AM V ++M + GL  D  TY  +I   CK+  ++ 
Sbjct: 368 NGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVED 427

Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
           A      M+D   SP    Y+ L+   C  +  +   +L+ E + RG+C+D   + ++I 
Sbjct: 428 AMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIID 487

Query: 487 RFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMI 546
             CK+ +V  +++LF+LM   G+  D + Y++L   Y  AG+    + +L  M    +  
Sbjct: 488 SHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKP 547

Query: 547 TLKIYRSFSASYAKDNEILD 566
               Y +    Y K + + D
Sbjct: 548 DCVTYNTLINGYCKISRMED 567



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 105/373 (28%), Positives = 188/373 (50%), Gaps = 4/373 (1%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLA-KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           ++FD M    L P +     LL   A K  L +M   +   MV+ G+  N +++++LI A
Sbjct: 325 KMFDSMTKRGLKPEITTYGTLLQGYATKGALVEM-HGLLDLMVRNGIHPNHYVFSILICA 383

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
             K   VD+   +  +M  + +  D  TY T+I + CK G   +A+   ++M  E +SP 
Sbjct: 384 YAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPG 443

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLRE 327
            + YNSLIH  C   +  +A+ L  ++  +G   + + + ++ID +C+   + E+ +L +
Sbjct: 444 NIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFD 503

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
           +M   GV P ++TY++++   C  G++ +A +LL  M    + PD VT NTLIN YCKI 
Sbjct: 504 LMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKIS 563

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
               A+ +   M  +G+  D  TY  ++ G  + +    AKEL  G+ ++G      +Y+
Sbjct: 564 RMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYN 623

Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGN 507
            ++ G C  N  +  L++        L ++   +  +I    K  + D A+ LF  +  N
Sbjct: 624 IILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSAN 683

Query: 508 GILGDSVIYTSLA 520
           G++ D   Y+ +A
Sbjct: 684 GLVPDVRTYSLMA 696



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 123/448 (27%), Positives = 206/448 (45%), Gaps = 13/448 (2%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG---VVANIHLY 203
           +D   VFD++        ++     L  +A+      V + Y +M + G   V  N+  Y
Sbjct: 36  EDARHVFDELLRRGRGASIYGLNCALADVARHSPAAAVSR-YNRMARAGADEVTPNLCTY 94

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL-AVQDRME 262
            +LI +CC +  +D     L  +  K  R D   +  L+   C      +A+  V  RM 
Sbjct: 95  GILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 154

Query: 263 REGISPDIVTYNSLIHGFCREGRMREARRLFR----DIKGATPNHVTYTTLIDGYCRAND 318
           + G  P++ +YN L+ G C E R +EA  L +    D     P+ V+YTT+I+G+ +  D
Sbjct: 155 QLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGD 214

Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT 378
           L++A      M  +G+ P VVTY+SI+  LCK   +  A  +L  M +  + P+  T N+
Sbjct: 215 LDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNS 274

Query: 379 LINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAG 438
           +++ YC  G    A+    +M   G+  D  TY +L+   CK      A+++   M   G
Sbjct: 275 IVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRG 334

Query: 439 FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQ 498
             P   +Y  L+ GY  K     +  LLD  V  G+  +  V+  LI  + K+ KVD A 
Sbjct: 335 LKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAM 394

Query: 499 RLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSAS- 557
            +F+ M+  G+  D+V Y ++     ++G  +      + M   RL     +Y S   S 
Sbjct: 395 LVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSL 454

Query: 558 --YAKDNEILDLFWSHVVDRGLMSKHIF 583
             + K ++  +L    ++DRG+    IF
Sbjct: 455 CIFDKWDKAKELIL-EMLDRGICLDTIF 481



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 123/461 (26%), Positives = 211/461 (45%), Gaps = 22/461 (4%)

Query: 57  PSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLE---KIALRDFLSTP 113
           P  +  F K   S     +  + ++ +++  L KN     A+ M +   K  L+  ++T 
Sbjct: 285 PKEAIGFLKKMHS--DGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTY 342

Query: 114 SVL-------NALVKIHDDPD--------GNSHVLSWLVIFYANLKMTQDGLQVFDQMRV 158
             L        ALV++H   D         N +V S L+  YA        + VF +MR 
Sbjct: 343 GTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQ 402

Query: 159 HNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDK 218
             L P       ++  L K    +   + +++M+   +     +YN LIH+ C     DK
Sbjct: 403 QGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDK 462

Query: 219 VEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIH 278
            ++L+ EM  + +  D   +N++I  +CK+G   E+  + D M R G+ PDI+TY++LI 
Sbjct: 463 AKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLID 522

Query: 279 GFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYP 336
           G+C  G+M EA +L   +   G  P+ VTY TLI+GYC+ + +E+AL L   M + GV P
Sbjct: 523 GYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSP 582

Query: 337 GVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVK 396
            ++TYN IL+ L +  R   A  L   + E     +  T N +++  CK   T  A+++ 
Sbjct: 583 DIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMF 642

Query: 397 NRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNK 456
             +    L L+  T+  +I    K    D AK+L   +   G  P   +YS + +    +
Sbjct: 643 QNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQ 702

Query: 457 NNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYA 497
              E L  L       G   +  +  +++R+  ++  +  A
Sbjct: 703 GLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRA 743



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 103/390 (26%), Positives = 184/390 (47%), Gaps = 4/390 (1%)

Query: 115 VLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNS 174
           VL ++VK    P  N    + +V  Y +    ++ +    +M    + P +     L++ 
Sbjct: 256 VLTSMVKNGVMP--NCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDY 313

Query: 175 LAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRAD 234
           L K+       K++  M + G+   I  Y  L+        + ++  LL  M    +  +
Sbjct: 314 LCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPN 373

Query: 235 LFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR 294
            + ++ LI  Y K+G   +A+ V  +M ++G++PD VTY ++I   C+ GR+ +A R F 
Sbjct: 374 HYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFE 433

Query: 295 DI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEG 352
            +  +  +P ++ Y +LI   C  +  ++A  L   M  +G+    + +NSI+   CKEG
Sbjct: 434 QMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEG 493

Query: 353 RIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYK 412
           R+ ++ +L + M    + PD +T +TLI+ YC  G    A K+   M+  G+  D  TY 
Sbjct: 494 RVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYN 553

Query: 413 ALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSR 472
            LI+G+CK   M+ A  L   M  +G SP   +Y+ ++ G        A  +L       
Sbjct: 554 TLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITES 613

Query: 473 GLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
           G  +++S Y  ++   CK    D A R+F 
Sbjct: 614 GTQLELSTYNIILHGLCKNNLTDEALRMFQ 643



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 71/268 (26%), Positives = 109/268 (40%), Gaps = 72/268 (26%)

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
           K++  MV++GV  +I  Y+ LI   C +  +D+  KLL  M    ++ D  TYNTLI  Y
Sbjct: 500 KLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGY 559

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNH 303
           CK     +AL +   ME  G+SPDI+TYN ++ G  +  R   A+ L+  I   G     
Sbjct: 560 CKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLEL 619

Query: 304 VTYTTLIDGYCRANDLEEALRLRE-----------------------------------V 328
            TY  ++ G C+ N  +EALR+ +                                    
Sbjct: 620 STYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAA 679

Query: 329 MAAKGVYPGVVTY-----------------------------------NSILRKLCKEGR 353
           ++A G+ P V TY                                   NSI+RKL + G 
Sbjct: 680 LSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGD 739

Query: 354 IRDANRLLNEMNEKKIAPDNVTCNTLIN 381
           I  A   L  ++EK  + +  T +  ++
Sbjct: 740 ITRAGTYLFMIDEKHFSLEASTASLFLD 767


>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
 gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
          Length = 596

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 117/401 (29%), Positives = 205/401 (51%), Gaps = 2/401 (0%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
            + + + D+M      P+L    V++N L K   TD+   +  KM    + A++ ++N +
Sbjct: 169 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTI 228

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           I + CK   VD    L  EME K +R ++ TY++LI+  C  G   +A  +   M  + I
Sbjct: 229 IDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 288

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
           +P++VT+N+LI  F +EG+  EA +L+ D+  +   P+  TY +L++G+C  + L++A +
Sbjct: 289 NPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQ 348

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           + E M +K  +P VVTYN++++  CK  R+ D   L  EM+ + +  D VT  TLI    
Sbjct: 349 MFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLF 408

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
             GD  +A KV  +M+  G+  D  TY  L+ G C   +++ A E+   M  +       
Sbjct: 409 HDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIY 468

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
            Y+ +++G C     +    L      +G+  +V  Y  +I   C K  +  A  L   M
Sbjct: 469 IYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKM 528

Query: 505 QGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
           + +G L +S  Y +L  A+ R G+  A ++++ +M   R +
Sbjct: 529 KEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFV 569



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 134/463 (28%), Positives = 222/463 (47%), Gaps = 40/463 (8%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D + +F  M     +P +     LL+++AK +  D+V  + +KM +L +V  ++ YN+LI
Sbjct: 30  DAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILI 89

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           +  C+ S +     LL +M        + T ++L+  YC      +A+A+ D+M   G  
Sbjct: 90  NCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYR 149

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRAND------- 318
           PD +T+ +LIHG     +  EA  L   +  +G  PN VTY  +++G C+  D       
Sbjct: 150 PDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNL 209

Query: 319 ----------------------------LEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
                                       +++AL L + M  KG+ P VVTY+S++  LC 
Sbjct: 210 LNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCS 269

Query: 351 EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
            GR  DA++LL++M EKKI P+ VT N LI+A+ K G    A K+ + M++  +  D FT
Sbjct: 270 YGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFT 329

Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFV 470
           Y +L++GFC    +D AK++   M+     P   +Y+ L+ G+C     E   +L  E  
Sbjct: 330 YNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMS 389

Query: 471 SRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPK 530
            RGL  D   Y  LI+        D AQ++F  M  +G+  D + Y+ L       G+ +
Sbjct: 390 HRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLE 449

Query: 531 ACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI---LDLFWS 570
              ++ D M +  + + + IY +      K  ++    DLF S
Sbjct: 450 KALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCS 492



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 126/408 (30%), Positives = 195/408 (47%), Gaps = 4/408 (0%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           ++L  ++K+  +P  +   LS L+  Y + K   D + + DQM      P     T L++
Sbjct: 103 ALLGKMMKLGYEP--SIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIH 160

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
            L           +  +MVQ G   N+  Y V+++  CK  D D    LL +ME   + A
Sbjct: 161 GLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEA 220

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           D+  +NT+I   CK     +AL +   ME +GI P++VTY+SLI   C  GR  +A +L 
Sbjct: 221 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 280

Query: 294 RDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
            D+  K   PN VT+  LID + +     EA +L + M  + + P + TYNS++   C  
Sbjct: 281 SDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMH 340

Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
            R+  A ++   M  K   PD VT NTLI  +CK        ++   M   GL+ D  TY
Sbjct: 341 DRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTY 400

Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
             LI G     + D A+++   M+  G  P   +YS L+DG CN    E  L++ D    
Sbjct: 401 TTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK 460

Query: 472 RGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
             + +D+ +Y  +I   CK  KVD    LF  +   G+  + V Y ++
Sbjct: 461 SEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTM 508



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 132/502 (26%), Positives = 231/502 (46%), Gaps = 37/502 (7%)

Query: 19  AIMLKGHWAKL-LNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHS 77
           A+ L G   KL   P+I + L+S      LLN Y  CH   +S A     +     Y+  
Sbjct: 101 ALALLGKMMKLGYEPSIVT-LSS------LLNGY--CHGKRISDAVALVDQMVEMGYRPD 151

Query: 78  LQSHWTMIHILTKNKHFKSAQNMLEKIALR----DFLSTPSVLNALVKIHDDPDGNSHVL 133
             +  T+IH L  +     A  +++++  R    + ++   V+N L K  D         
Sbjct: 152 TITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD--------- 202

Query: 134 SWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQ 193
                       T   L + ++M    +   +     +++SL K R  D    ++K+M  
Sbjct: 203 ------------TDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMET 250

Query: 194 LGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYE 253
            G+  N+  Y+ LI   C         +LL +M  K +  +L T+N LI  + K+G   E
Sbjct: 251 KGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVE 310

Query: 254 ALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLID 311
           A  + D M +  I PDI TYNSL++GFC   R+ +A+++F  +  K   P+ VTY TLI 
Sbjct: 311 AEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIK 370

Query: 312 GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAP 371
           G+C++  +E+   L   M+ +G+    VTY ++++ L  +G   +A ++  +M    + P
Sbjct: 371 GFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPP 430

Query: 372 DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
           D +T + L++  C  G    A++V + M ++ + LD + Y  +I G CKA ++D   +L 
Sbjct: 431 DIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLF 490

Query: 432 FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
             +   G  P+  +Y+ ++ G C+K   +    LL +    G   +   Y  LIR   + 
Sbjct: 491 CSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRD 550

Query: 492 EKVDYAQRLFNLMQGNGILGDS 513
                +  L   M+    +GD+
Sbjct: 551 GDKAASAELIREMRSCRFVGDA 572



 Score =  111 bits (278), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 67/233 (28%), Positives = 109/233 (46%), Gaps = 2/233 (0%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           Q+F+ M   +  P +     L+    K +  +   +++++M   G+V +   Y  LI   
Sbjct: 348 QMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL 407

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
               D D  +K+  +M    V  D+ TY+ L+   C  G   +AL V D M++  I  DI
Sbjct: 408 FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI 467

Query: 271 VTYNSLIHGFCREGRMREARRLF--RDIKGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
             Y ++I G C+ G++ +   LF    +KG  PN VTY T+I G C    L+EA  L + 
Sbjct: 468 YIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKK 527

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
           M   G  P   TYN+++R   ++G    +  L+ EM   +   D  T   + N
Sbjct: 528 MKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVAN 580



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 65/283 (22%), Positives = 116/283 (40%), Gaps = 35/283 (12%)

Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT 378
           L++A+ L   M      P +V +N +L  + K  +      L  +M   +I     T N 
Sbjct: 28  LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNI 87

Query: 379 LINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAG 438
           LIN +C+    + A+ +  +M++ G      T  +L++G+C  K +  A  L+  M++ G
Sbjct: 88  LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 147

Query: 439 FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSR--------------GLC--------- 475
           + P   +++ L+ G    N     + L+D  V R              GLC         
Sbjct: 148 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 207

Query: 476 ------------VDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAY 523
                        DV ++  +I   CK   VD A  LF  M+  GI  + V Y+SL    
Sbjct: 208 NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 267

Query: 524 WRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
              G     S +L DM  +++   L  + +   ++ K+ + ++
Sbjct: 268 CSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVE 310



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 61/254 (24%), Positives = 109/254 (42%), Gaps = 12/254 (4%)

Query: 337 GVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVK 396
           G   Y  ILR    + ++ DA  L   M + +  P  V  N L++A  K+      + + 
Sbjct: 11  GSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLG 70

Query: 397 NRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNK 456
            +M    ++   +TY  LI+ FC+  ++ +A  LL  M+  G+ PS  + S L++GYC+ 
Sbjct: 71  EKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHG 130

Query: 457 NNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIY 516
                 + L+D+ V  G   D   +  LI       K   A  L + M   G   + V Y
Sbjct: 131 KRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTY 190

Query: 517 TSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRG 576
             +     + G+     ++L+ M   ++   + I+ +   S  K        + HV D  
Sbjct: 191 GVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCK--------YRHVDD-- 240

Query: 577 LMSKHIFKEMQLRN 590
             + ++FKEM+ + 
Sbjct: 241 --ALNLFKEMETKG 252


>gi|414885390|tpg|DAA61404.1| TPA: hypothetical protein ZEAMMB73_280584 [Zea mays]
          Length = 645

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 118/392 (30%), Positives = 199/392 (50%), Gaps = 5/392 (1%)

Query: 130 SHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYK 189
           +  L  LVI  + + +  + L VF ++R    +P L AC  +L+ L K R     W+++ 
Sbjct: 119 APALGVLVIALSQMGLLDEALYVFRRLRT---LPALPACNAVLDGLVKARRPGCAWELFD 175

Query: 190 KMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKG 249
           +M++ G+V ++  YN LI+AC     V K +++  +M  + +  ++ TY T+I   C++G
Sbjct: 176 EMLRRGLVPSVVTYNTLINACRFQGTVAKAQEVWDQMVAQQIDPNVVTYTTMICALCEEG 235

Query: 250 MHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYT 307
              +A  + D M+  G+ P+  TYN L+ G C+   +  A  L++++   G  PN V +T
Sbjct: 236 CIGDAERLFDAMKEAGMQPNQYTYNVLMSGHCQRDDVNSAVVLYQELLKSGLNPNAVIFT 295

Query: 308 TLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEK 367
           TLIDG+C+A    EA  +   M   GV P V  YNS++    + G  ++A  L  EM   
Sbjct: 296 TLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEALALYQEMTRL 355

Query: 368 KIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIA 427
            + PD  TC+ ++   C  G    A +    + E G+ L+   Y ALI  +C+   ++ A
Sbjct: 356 GLCPDEFTCSIVVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALIDEYCRIGNLEEA 415

Query: 428 KELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRR 487
                 M + G  P+  SYS L+DG+  +   +  + +  E V++G+  +V  Y ALI  
Sbjct: 416 LATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVTYTALIHG 475

Query: 488 FCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
             K   +D A RL   M  NGI  +++  + L
Sbjct: 476 HAKNGGIDAAFRLHKEMIENGISPNAITVSVL 507



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 106/374 (28%), Positives = 172/374 (45%), Gaps = 30/374 (8%)

Query: 239 NTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI-- 296
             L+    + G+  EAL V  R+      P +   N+++ G  +  R   A  LF ++  
Sbjct: 123 GVLVIALSQMGLLDEALYVFRRLR---TLPALPACNAVLDGLVKARRPGCAWELFDEMLR 179

Query: 297 KGATPNHVTYTTLIDGYCR-ANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIR 355
           +G  P+ VTY TLI+  CR    + +A  + + M A+ + P VVTY +++  LC+EG I 
Sbjct: 180 RGLVPSVVTYNTLINA-CRFQGTVAKAQEVWDQMVAQQIDPNVVTYTTMICALCEEGCIG 238

Query: 356 DANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALI 415
           DA RL + M E  + P+  T N L++ +C+  D  SA+ +   +L++GL  +   +  LI
Sbjct: 239 DAERLFDAMKEAGMQPNQYTYNVLMSGHCQRDDVNSAVVLYQELLKSGLNPNAVIFTTLI 298

Query: 416 HGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLC 475
            GFCKAK    AK +   M   G +P+   Y+ L+DG     N +  L L  E    GLC
Sbjct: 299 DGFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEALALYQEMTRLGLC 358

Query: 476 VDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG-------- 527
            D      ++R  C   ++  A R    +Q +G+  ++  Y +L   Y R G        
Sbjct: 359 PDEFTCSIVVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALIDEYCRIGNLEEALAT 418

Query: 528 ---------EPKAC--SDILDDMYRR-RLMITLKIYRSFSASYAKDNEI--LDLFWSHVV 573
                    EP     S ++D   +R ++ I + IY    A   + N +    L   H  
Sbjct: 419 CTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAK 478

Query: 574 DRGLMSK-HIFKEM 586
           + G+ +   + KEM
Sbjct: 479 NGGIDAAFRLHKEM 492



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 95/356 (26%), Positives = 170/356 (47%), Gaps = 22/356 (6%)

Query: 107 RDFLSTPSVL-NALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHL 165
           RD +++  VL   L+K   +P  N+ + + L+  +   K   +   +F +M    + P +
Sbjct: 269 RDDVNSAVVLYQELLKSGLNP--NAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTV 326

Query: 166 HACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCE 225
                L++   +         +Y++M +LG+  +    ++++   C    +   ++ L  
Sbjct: 327 PVYNSLMDGAFRSGNAQEALALYQEMTRLGLCPDEFTCSIVVRGLCDGGQMHVADRFLQG 386

Query: 226 MEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGR 285
           ++   V  +   YN LI  YC+ G   EALA   RM   GI P++V+Y+SLI G  + G+
Sbjct: 387 VQEDGVNLNAAAYNALIDEYCRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGK 446

Query: 286 MREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNS 343
           M+ A  ++ ++  KG  PN VTYT LI G+ +   ++ A RL + M   G+ P  +T + 
Sbjct: 447 MQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRLHKEMIENGISPNAITVSV 506

Query: 344 ILRKLCKEGRIRDANRLLNE-----------------MNEKKIAPDNVTCNTLINAYCKI 386
           ++  LC+E R+++A R + E                 + E+ + P++V   TLI      
Sbjct: 507 LVDGLCRENRVQEAVRFVMEYSGLKCSDIHSVFSNFTIEEECLIPNSVIYMTLIYGLYLD 566

Query: 387 GDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           G    A K+ + M ++G++ D FTY  LI G C    +  A  L   M+  G  P+
Sbjct: 567 GQHCEAGKLFSYMRKSGMIPDSFTYTLLIRGQCMLGYVLNAMMLYADMMKIGVKPT 622



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 90/361 (24%), Positives = 154/361 (42%), Gaps = 54/361 (14%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D  ++FD M+   + P+ +   VL++   +    +    +Y+++++ G+  N  ++  LI
Sbjct: 239 DAERLFDAMKEAGMQPNQYTYNVLMSGHCQRDDVNSAVVLYQELLKSGLNPNAVIFTTLI 298

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
              CK+    + + +  EM    V   +  YN+L+    + G   EALA+   M R G+ 
Sbjct: 299 DGFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEALALYQEMTRLGLC 358

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRL 325
           PD  T + ++ G C  G+M  A R  + ++  G   N   Y  LID YCR  +LEEAL  
Sbjct: 359 PDEFTCSIVVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALIDEYCRIGNLEEALAT 418

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
              M   G+ P VV+Y+S++    K G+++ A  +  EM  K I P+ VT   LI+ + K
Sbjct: 419 CTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAK 478

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMD-------------------- 425
            G   +A ++   M+E G+  +  T   L+ G C+   +                     
Sbjct: 479 NGGIDAAFRLHKEMIENGISPNAITVSVLVDGLCRENRVQEAVRFVMEYSGLKCSDIHSV 538

Query: 426 ----------------IAKELLFG----------------MLDAGFSPSYCSYSWLVDGY 453
                           I   L++G                M  +G  P   +Y+ L+ G 
Sbjct: 539 FSNFTIEEECLIPNSVIYMTLIYGLYLDGQHCEAGKLFSYMRKSGMIPDSFTYTLLIRGQ 598

Query: 454 C 454
           C
Sbjct: 599 C 599


>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580 [Vitis vinifera]
 gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
          Length = 764

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 118/401 (29%), Positives = 212/401 (52%), Gaps = 5/401 (1%)

Query: 168 CTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEME 227
           CTV+     ++   +   +++++M+ LG+  +I  +N LIH  C+   V + E+LL ++ 
Sbjct: 185 CTVIGGFYEENHRVE-AHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVL 243

Query: 228 FKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMR 287
            + V  +LFT N  I  +C++ M  EA+ + D + R G++PD++TYN+LI G C+  ++ 
Sbjct: 244 KRGVSPNLFTVNIFIQGFCQRAMLNEAIRLLDGVGR-GLTPDVITYNTLICGLCKNFKVV 302

Query: 288 EARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSIL 345
           EA    R +  +G  P+  TY ++IDGYC+   ++ A ++    A KG  P   TY S++
Sbjct: 303 EAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLI 362

Query: 346 RKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLM 405
             LC++G I  A  + NE  EK + P+ V CNTL+    + G    A+K+ N M E G  
Sbjct: 363 NGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCS 422

Query: 406 LDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKL 465
            D +TY  +I+G CK   +  A  L+   +  G  P   +++ L+DGYC K   +  +++
Sbjct: 423 PDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEI 482

Query: 466 LDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWR 525
           +D   + G+  DV  Y +++   CK  K +     F LM   G + + + Y  L  ++ +
Sbjct: 483 VDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCK 542

Query: 526 AGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
           A + +   +++++M  + L   +  + +    +  DN  LD
Sbjct: 543 ARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFC-DNGDLD 582



 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 132/477 (27%), Positives = 234/477 (49%), Gaps = 23/477 (4%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEK--------------IALRDFLST--PSVL 116
           N + S+QS+  +++IL + ++F  A  +  +              I ++ F  T  P   
Sbjct: 106 NCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGIVPDVYTFTIRMKSFCRTSRPHAA 165

Query: 117 NALVKIHDDPDGNSHVLSWLVI---FYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
             L+         S  +++  +   FY       +  ++F++M    + P + A   L++
Sbjct: 166 RRLLNNMPSQGCESSAVAYCTVIGGFYEE-NHRVEAHELFEEMLGLGICPDIMAFNKLIH 224

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
           +L +        ++  K+++ GV  N+   N+ I   C+ + +++  +LL +   + +  
Sbjct: 225 TLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNEAIRLL-DGVGRGLTP 283

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           D+ TYNTLI   CK     EA     +M  EG  PD  TYNS+I G+C+ G M+ A ++ 
Sbjct: 284 DVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQIL 343

Query: 294 RD--IKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
           RD   KG  P+  TY +LI+G C+  D++ A+ +      KG+ P +V  N++++ L ++
Sbjct: 344 RDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQ 403

Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
           G I  A +L+NEM+E   +PD  T N +IN  CKIG  + A  +    +  G + D FT+
Sbjct: 404 GLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTF 463

Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
             LI G+CK  ++D A E++  M + G SP   +Y+ +++G C     E ++      + 
Sbjct: 464 NTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMME 523

Query: 472 RGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
           +G   ++  Y  L   FCK  KV+ A  L   MQ  G+  D V + +L   +   G+
Sbjct: 524 KGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGD 580



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 132/528 (25%), Positives = 243/528 (46%), Gaps = 54/528 (10%)

Query: 74  YKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVL 133
           +KH+L ++  MI  L  +  F++ + +L +  +       ++ N L++          V 
Sbjct: 36  FKHTLLTYKGMIEKLGFHGEFEAMEEVLAETRM-------NIDNGLLE---------GVY 79

Query: 134 SWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQ 193
              +  Y      Q+ + VF++M   N  P + +   ++N L + R  D   KVY +M  
Sbjct: 80  IGAMRNYGRKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRD 139

Query: 194 LGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYE 253
            G+V +++ + + + + C++S      +LL  M  +   +    Y T+I  + ++    E
Sbjct: 140 KGIVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVE 199

Query: 254 ALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLID 311
           A  + + M   GI PDI+ +N LIH  CR+G ++E+ RL   +  +G +PN  T    I 
Sbjct: 200 AHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQ 259

Query: 312 GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAP 371
           G+C+   L EA+RL + +  +G+ P V+TYN+++  LCK  ++ +A   L +M  +   P
Sbjct: 260 GFCQRAMLNEAIRLLDGVG-RGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEP 318

Query: 372 DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
           D  T N++I+ YCK+G   +A ++       G + D+ TY +LI+G C+  ++D A  + 
Sbjct: 319 DGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVF 378

Query: 432 FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE--------------FVSRGLC-- 475
              ++ G  P+    + LV G   +      LKL++E               V  GLC  
Sbjct: 379 NEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKI 438

Query: 476 -------------------VDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIY 516
                               DV  +  LI  +CKK K+D A  + + M  +G+  D + Y
Sbjct: 439 GCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITY 498

Query: 517 TSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
            S+     +AG+ +        M  +  +  +  Y   + S+ K  ++
Sbjct: 499 NSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKV 546



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 105/393 (26%), Positives = 192/393 (48%), Gaps = 5/393 (1%)

Query: 125 DPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMV 184
           +PDG ++  + ++  Y  L M Q+  Q+         +P       L+N L +D   D  
Sbjct: 317 EPDGFTY--NSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRA 374

Query: 185 WKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIAL 244
             V+ + ++ G+  N+ L N L+    +   + +  KL+ EM       D++TYN +I  
Sbjct: 375 INVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVING 434

Query: 245 YCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPN 302
            CK G   +A  +      +G  PD+ T+N+LI G+C++ ++  A  +   +   G +P+
Sbjct: 435 LCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPD 494

Query: 303 HVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLN 362
            +TY ++++G C+A   E+ +   ++M  KG  P ++TYN +    CK  ++ +A  L+ 
Sbjct: 495 VITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIE 554

Query: 363 EMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQF-TYKALIHGFCKA 421
           EM  K + PD V   TL+  +C  GD   A ++  R+ E         TY  +I+ F   
Sbjct: 555 EMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGK 614

Query: 422 KEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVY 481
             M++A++L   M + GFSP   +Y  ++DG+C   N  +    L   + +GL   ++ +
Sbjct: 615 LNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTF 674

Query: 482 RALIRRFCKKEKVDYAQRLFNLMQGNGILGDSV 514
             ++   C K +V  A  + +LM   GI+ + V
Sbjct: 675 GRVLNCLCLKRRVHEAVGIIHLMVHKGIVPEVV 707


>gi|255555533|ref|XP_002518803.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223542184|gb|EEF43728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 775

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 163/625 (26%), Positives = 275/625 (44%), Gaps = 80/625 (12%)

Query: 34  IASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKH 93
           I SSL    + +VL+ L      P L+  FF+WA++    +  + +S+  ++HIL   + 
Sbjct: 89  IDSSLGPIWVSRVLVELK---QDPKLALKFFRWAKTKF-GFCLTTESYCLLVHILFYARM 144

Query: 94  FKSAQNML-EKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQV 152
           +  A   L E I+ R  L    V   L    +       V   L   +  L M ++  Q 
Sbjct: 145 YFDANFFLKELISSRRILPGFDVFEVLWSTRNVCVPGFGVFDALFSVFIELGMLEEAGQC 204

Query: 153 FDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCK 212
           F +M    + P   +C   L  LAK    D+  K ++ MV  G+  ++  YN++I   CK
Sbjct: 205 FSRMTRFRVFPKARSCNAFLYRLAKTGKGDLSNKFFRDMVGAGIAQSVFTYNIMIGYMCK 264

Query: 213 SSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVT 272
             D+   + L  +M+   +  D+ TYN+LI  Y K G+  E+  + + M+  G  PD++T
Sbjct: 265 EGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGYGKLGLLDESFCLFEEMKDVGCEPDVIT 324

Query: 273 YNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMA 330
           YN+LI+ FC+  +M +A     ++K  G  PN VTY+TLID  C+ + L++A++    M 
Sbjct: 325 YNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVTYSTLIDALCKEHMLQQAIKFLLDMR 384

Query: 331 AKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTA 390
             G+ P   TY S++   CK G + DA +L +EM + ++  + VT  TL++  CK G   
Sbjct: 385 RVGLSPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQVGFNVVTYTTLLDGLCKEGRMM 444

Query: 391 SAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLV 450
            A  +   M++AG+  +  TY AL+HG  K K ++ A ELL  + +    P    Y  ++
Sbjct: 445 EAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVENALELLKEIKEKKIKPDLLLYGTII 504

Query: 451 DGYCNKNNEEAL-----------------------------------LKLLDEFVSRGLC 475
            G C++N  E                                     L LL E    G+ 
Sbjct: 505 WGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYFKTGKTVEALNLLQEMCDLGVE 564

Query: 476 VDVSVYRALIRRFCKK----EKVDY--------------------------------AQR 499
           V +  +  LI   CKK    E +DY                                A++
Sbjct: 565 VTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNNVAVCTALIDGLCKNNYIEAAKK 624

Query: 500 LFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYA 559
           LF+ MQ   ++ D + YT+L     +  + +   +I   M    + + L  Y S     +
Sbjct: 625 LFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALNIRSRMSELGMELDLHAYTSLVWGLS 684

Query: 560 KDNEILD--LFWSHVVDRGLMSKHI 582
           + N +    +F + ++ +G++   I
Sbjct: 685 QGNLVQQARMFLNEMIGKGIVPDEI 709



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 117/473 (24%), Positives = 211/473 (44%), Gaps = 40/473 (8%)

Query: 108 DFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHA 167
           D ++  S+ + + ++   PD  ++  + L+  Y  L +  +   +F++M+     P +  
Sbjct: 267 DMVTAKSLFHQMKQMGLTPDIVTY--NSLIDGYGKLGLLDESFCLFEEMKDVGCEPDVIT 324

Query: 168 CTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEME 227
              L+N   K       +    +M   G+  N+  Y+ LI A CK   + +  K L +M 
Sbjct: 325 YNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVTYSTLIDALCKEHMLQQAIKFLLDMR 384

Query: 228 FKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMR 287
              +  + FTY +LI   CK G   +AL + D M +  +  ++VTY +L+ G C+EGRM 
Sbjct: 385 RVGLSPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQVGFNVVTYTTLLDGLCKEGRMM 444

Query: 288 EARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSIL 345
           EA  LFR +   G TPN  TYT L+ G+ +   +E AL L + +  K + P ++ Y +I+
Sbjct: 445 EAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVENALELLKEIKEKKIKPDLLLYGTII 504

Query: 346 RKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLM 405
             LC + ++ +   +++EM    I  ++V     ++AY K G T  A+ +   M + G+ 
Sbjct: 505 WGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYFKTGKTVEALNLLQEMCDLGVE 564

Query: 406 LDQFTY------------------------------------KALIHGFCKAKEMDIAKE 429
           +   T+                                     ALI G CK   ++ AK+
Sbjct: 565 VTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNNVAVCTALIDGLCKNNYIEAAKK 624

Query: 430 LLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFC 489
           L   M D    P   +Y+ L+DG     + +  L +       G+ +D+  Y +L+    
Sbjct: 625 LFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALNIRSRMSELGMELDLHAYTSLVWGLS 684

Query: 490 KKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRR 542
           +   V  A+   N M G GI+ D ++   L   Y+  G      ++ D++ ++
Sbjct: 685 QGNLVQQARMFLNEMIGKGIVPDEILCIRLLRKYYELGSIDEAIELHDELLKK 737


>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
 gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
          Length = 570

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 132/500 (26%), Positives = 232/500 (46%), Gaps = 24/500 (4%)

Query: 47  LLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIAL 106
           ++ ++ C     L+   F+   S    ++HS+ +   ++ +  + K  + A N+L+    
Sbjct: 28  VVKIFQCLKDADLAWELFQCLSSPRFGFQHSVHTGNALLDVFARTKRHREAGNLLKNELA 87

Query: 107 RDFLSTPSVLNALVKIHDDPDGNSHVLSW--LVIFYANLKMTQDGLQVFDQMRV-HNLMP 163
             FL               PD    V +W  L+  Y   +  ++   V  +M   + + P
Sbjct: 88  TTFL---------------PD----VETWNVLITGYCLAREPEEAFAVIREMEEDYGVAP 128

Query: 164 HLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLL 223
            L    ++L+ L K          ++     G   +IH Y  ++    K+  +     L+
Sbjct: 129 SLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALM 188

Query: 224 CEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCRE 283
            ++        + TYN L+   CK G   EA+ +  ++   G +PD+VTY SLI G  +E
Sbjct: 189 EKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKE 248

Query: 284 GRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTY 341
            R  EA +LF++  ++G   + V YT LI G  +A  + +A  + + M ++G  P VVT 
Sbjct: 249 KRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTL 308

Query: 342 NSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLE 401
           ++++  LCK GRI  A R+   M  + +AP+ V  + LI+  CK      A+++  +M +
Sbjct: 309 STMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKK 368

Query: 402 AGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEA 461
           A    D  TY  LI G CK+ +++ A+     ML+AG  P   +Y+ LV G+C   N +A
Sbjct: 369 AFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDA 428

Query: 462 LLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAY 521
              + D+  S     +V  Y  LI   CK+ ++  A   F  M+  G   DS +Y+SL  
Sbjct: 429 ACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVD 488

Query: 522 AYWRAGEPKACSDILDDMYR 541
              ++G+ +    + D+M R
Sbjct: 489 GLCKSGKLEGGCMLFDEMER 508



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 127/435 (29%), Positives = 196/435 (45%), Gaps = 20/435 (4%)

Query: 77  SLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWL 136
           SL++H  ++H L K+            +A  D   T +     + IH      + ++ WL
Sbjct: 129 SLKTHNLVLHGLCKSGKV---------LAAMDHFETTTTNGCTIDIHT----YTAIVDWL 175

Query: 137 VIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGV 196
               A  K  QD + + +++  +   P +     LLN L K    +    + +K+V  G 
Sbjct: 176 ----AKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGC 231

Query: 197 VANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALA 256
             ++  Y  LI    K     +  KL  EM  + +  D   Y  LI    + G   +A +
Sbjct: 232 TPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASS 291

Query: 257 VQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYC 314
           V   M  +G  PD+VT +++I G C+ GR+  A R+F+ +  +G  PN V Y+ LI G C
Sbjct: 292 VYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLC 351

Query: 315 RANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNV 374
           +A  ++ AL +   M      P  +TYN ++  LCK G +  A    +EM E    PD  
Sbjct: 352 KARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVY 411

Query: 375 TCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGM 434
           T N L++ +CK G+T +A  V + M  +    +  TY  LI G CK +++  A      M
Sbjct: 412 TYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHM 471

Query: 435 LDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKV 494
            + G  P    YS LVDG C     E    L DE    G+    +  R LI   CK  +V
Sbjct: 472 KERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANSQTRTR-LIFHLCKANRV 530

Query: 495 DYAQRLFNLMQGNGI 509
           D A  LFN ++  G+
Sbjct: 531 DEAVSLFNAIRKEGM 545



 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 98/388 (25%), Positives = 172/388 (44%), Gaps = 25/388 (6%)

Query: 78  LQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALV----------------- 120
           + ++  ++  L KNK  + A  ++EKI       T +  NAL+                 
Sbjct: 165 IHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLR 224

Query: 121 KIHDD---PDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAK 177
           KI D+   PD  ++  + L+      K + +  ++F +M +  L+      T L+  L +
Sbjct: 225 KIVDNGCTPDVVTY--TSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQ 282

Query: 178 DRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFT 237
                    VYK M   G V ++   + +I   CK+  +    ++   ME + +  +   
Sbjct: 283 AGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVV 342

Query: 238 YNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI- 296
           Y+ LI   CK      AL +  +M++   +PD +TYN LI G C+ G +  AR  F ++ 
Sbjct: 343 YSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEML 402

Query: 297 -KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIR 355
             G  P+  TY  L+ G+C+A + + A  + + M++    P VVTY +++  LCK  ++ 
Sbjct: 403 EAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLT 462

Query: 356 DANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALI 415
            A+     M E+   PD+   ++L++  CK G       + + M  +G+   Q T   LI
Sbjct: 463 KASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANSQ-TRTRLI 521

Query: 416 HGFCKAKEMDIAKELLFGMLDAGFSPSY 443
              CKA  +D A  L   +   G    Y
Sbjct: 522 FHLCKANRVDEAVSLFNAIRKEGMPHPY 549



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 85/295 (28%), Positives = 131/295 (44%), Gaps = 3/295 (1%)

Query: 263 REGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGAT--PNHVTYTTLIDGYCRANDLE 320
           R G    + T N+L+  F R  R REA  L ++    T  P+  T+  LI GYC A + E
Sbjct: 52  RFGFQHSVHTGNALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPE 111

Query: 321 EALR-LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTL 379
           EA   +RE+    GV P + T+N +L  LCK G++  A              D  T   +
Sbjct: 112 EAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAI 171

Query: 380 INAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGF 439
           ++   K      A+ +  ++   G      TY AL++G CK   ++ A +LL  ++D G 
Sbjct: 172 VDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGC 231

Query: 440 SPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQR 499
           +P   +Y+ L+DG   +       KL  E   RGL +D   Y ALIR   +  K+  A  
Sbjct: 232 TPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASS 291

Query: 500 LFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSF 554
           ++  M   G + D V  +++     +AG   A   I   M  R L     +Y + 
Sbjct: 292 VYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSAL 346


>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
 gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
          Length = 924

 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 121/424 (28%), Positives = 208/424 (49%), Gaps = 5/424 (1%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           VF QM    + P     T++++ L K +  D    V+++M+  GV  N   YN LIH   
Sbjct: 352 VFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYL 411

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
            +   ++V + + EM   D+  D+FTY  L+   CK G   EA ++ D M R+GI P + 
Sbjct: 412 STGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVT 471

Query: 272 TYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
            Y  ++HG+ ++G + E   L   +   G +PNH  + T+I  Y +   ++E + +   M
Sbjct: 472 IYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKM 531

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
             +G+ P VVTY +++  LCK GR+ DA    N+M  + + P+NV  N+L+   C +   
Sbjct: 532 KQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKW 591

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
               ++   ML  G+  D   +  ++   CK   +  A+ L+  M+  G  P   SY+ L
Sbjct: 592 EKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTL 651

Query: 450 VDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGI 509
           +DG+C  +  +  +KLLD  VS GL  ++  Y  L+  +CK  ++D A  LF  M   G+
Sbjct: 652 IDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGV 711

Query: 510 LGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDN---EILD 566
                 Y ++    +R+G      ++  +M + R + ++  Y      + K+N   E   
Sbjct: 712 TPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFK 771

Query: 567 LFWS 570
           +F S
Sbjct: 772 IFQS 775



 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 122/412 (29%), Positives = 213/412 (51%), Gaps = 16/412 (3%)

Query: 170 VLLNSLAKD-----RLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLC 224
           +++N L K      R+ + +  + ++M ++G    +  YN L+   C     ++  +LL 
Sbjct: 120 IVVNQLLKGLCDTKRVGEAMHVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLH 179

Query: 225 EM---EFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFC 281
            M   +      D+ +YN +I  +  +G   +A ++   M   G+SPD+VTYN++I G C
Sbjct: 180 MMVDGQDSSCSPDVVSYNIVINGFFNEGQVDKAYSLFLEM---GVSPDVVTYNTIIDGLC 236

Query: 282 REGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVV 339
           +   +  A  +F+ +  KG  PN+VTY T+IDG C+A +++ A  + + M  KGV P  V
Sbjct: 237 KAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNV 296

Query: 340 TYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRM 399
           TYN+I+  LCK   +  A  +  +M ++ + PD+VT NT+I+  CK      A  V  +M
Sbjct: 297 TYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQM 356

Query: 400 LEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNE 459
           ++ G+  D  TY  +I G CKA+ +D A+ +   M+D G  P+  +Y+ L+ GY +    
Sbjct: 357 IDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQW 416

Query: 460 EALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
           E +++ + E  +  L  DV  Y  L+   CK  K + A+ LF+ M   GI     IY  +
Sbjct: 417 EEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIM 476

Query: 520 AYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKD---NEILDLF 568
            + Y + G      D+L+ M    +    +I+ +   +YAK    +E++ +F
Sbjct: 477 LHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIF 528



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 131/503 (26%), Positives = 237/503 (47%), Gaps = 55/503 (10%)

Query: 80  SHWTMIHILTKNKHFKSA----QNMLEKIALRDFLSTPSVLNALVKIH--DDPDG----- 128
           ++ T+I  L K +    A    Q M++K    D L+   +++ L K    D  +G     
Sbjct: 332 TYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQM 391

Query: 129 -------NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLT 181
                  N+   + L+  Y +    ++ +Q   +M  H+L P +    +LL+ L K+   
Sbjct: 392 IDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKC 451

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
           +    ++  M++ G+  ++ +Y +++H   K   + ++  LL  M    +  +   +NT+
Sbjct: 452 NEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTV 511

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGA 299
           I  Y K+ M  E + +  +M+++G+SP++VTY +LI   C+ GR+ +A   F  +  +G 
Sbjct: 512 ICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGV 571

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
           TPN+V + +L+ G C  +  E+   L   M  +G+ P +V +N++L  LCKEGR+ +A R
Sbjct: 572 TPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARR 631

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
           L++ M    + PD ++ NTLI+ +C       A+K+ + M+ AGL  +  +Y  L+HG+C
Sbjct: 632 LIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYC 691

Query: 420 KAKEMDIAKELLFGMLDAGFSP-----------------------------------SYC 444
           KA  +D A  L   ML  G +P                                   S C
Sbjct: 692 KAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSIC 751

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
           +YS ++DG+C  N  +   K+     S  L +D+  +  +I    K  + + A  LF  +
Sbjct: 752 TYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAI 811

Query: 505 QGNGILGDSVIYTSLAYAYWRAG 527
             NG++   V Y  +A      G
Sbjct: 812 PANGLVPSVVTYRLIAENLIEEG 834



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 108/367 (29%), Positives = 182/367 (49%), Gaps = 5/367 (1%)

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
           P + +  +++N    +   D   K Y   +++GV  ++  YN +I   CK+ +VD+ E +
Sbjct: 191 PDVVSYNIVINGFFNEGQVD---KAYSLFLEMGVSPDVVTYNTIIDGLCKAQEVDRAEDV 247

Query: 223 LCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR 282
             +M  K V+ +  TYNT+I   CK      A  V  +M  +G+ P  VTYN++I G C+
Sbjct: 248 FQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCK 307

Query: 283 EGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVT 340
              +  A  +F+ +  +G  P+HVTY T+IDG C+A  +++A  + + M  KGV P  +T
Sbjct: 308 AQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLT 367

Query: 341 YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML 400
           Y  I+  LCK   +  A  +  +M +K + P+N T N LI+ Y   G     ++    M 
Sbjct: 368 YTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMS 427

Query: 401 EAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEE 460
              L  D FTY  L+   CK  + + A+ L   M+  G  PS   Y  ++ GY  K    
Sbjct: 428 AHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALS 487

Query: 461 ALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLA 520
            +  LL+  V+ G+  +  ++  +I  + K+  +D    +F  M+  G+  + V Y +L 
Sbjct: 488 EMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLI 547

Query: 521 YAYWRAG 527
            A  + G
Sbjct: 548 DALCKLG 554



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 115/446 (25%), Positives = 213/446 (47%), Gaps = 7/446 (1%)

Query: 125 DPDGNSHVLSWLVIF--YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTD 182
           D   +  V+S+ ++   + N         +F +M V    P +     +++ L K +  D
Sbjct: 186 DSSCSPDVVSYNIVINGFFNEGQVDKAYSLFLEMGVS---PDVVTYNTIIDGLCKAQEVD 242

Query: 183 MVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLI 242
               V+++MV+ GV  N   YN +I   CK+ +VD  E +  +M  K V+    TYNT+I
Sbjct: 243 RAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTII 302

Query: 243 ALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGAT 300
              CK      A  V  +M   G+ PD VTYN++I G C+   + +A  +F+ +  KG  
Sbjct: 303 DGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVK 362

Query: 301 PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRL 360
           P+++TYT +IDG C+A  ++ A  + + M  KGV P   TYN ++      G+  +  + 
Sbjct: 363 PDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQR 422

Query: 361 LNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCK 420
           + EM+   + PD  T   L++  CK G    A  + + M+  G+      Y  ++HG+ K
Sbjct: 423 IKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGK 482

Query: 421 AKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSV 480
              +    +LL  M+  G SP++  ++ ++  Y  +   + ++ +  +   +GL  +V  
Sbjct: 483 KGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVT 542

Query: 481 YRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMY 540
           Y  LI   CK  +VD A   FN M   G+  ++V++ SL Y      + +   ++  +M 
Sbjct: 543 YGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEML 602

Query: 541 RRRLMITLKIYRSFSASYAKDNEILD 566
            + +   +  + +   +  K+  +++
Sbjct: 603 NQGIRPDIVFFNTVLCNLCKEGRVME 628



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 114/386 (29%), Positives = 189/386 (48%), Gaps = 6/386 (1%)

Query: 115 VLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNS 174
           +LN +V     P  N  + + ++  YA   M  + + +F +M+   L P++     L+++
Sbjct: 492 LLNLMVANGISP--NHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDA 549

Query: 175 LAK-DRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
           L K  R+ D V + + +M+  GV  N  ++N L++  C     +KVE+L  EM  + +R 
Sbjct: 550 LCKLGRVDDAVLQ-FNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRP 608

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           D+  +NT++   CK+G   EA  + D M   G+ PD+++YN+LI G C   RM EA +L 
Sbjct: 609 DIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLL 668

Query: 294 RDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
             +   G  PN V+Y TL+ GYC+A  ++ A  L   M  KGV PGV TYN+IL  L + 
Sbjct: 669 DGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRS 728

Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
           GR  +A  L   M + +      T + +++ +CK      A K+   +    L LD  T+
Sbjct: 729 GRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITF 788

Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
             +I G  K    + A +L   +   G  PS  +Y  + +    + + E L  L      
Sbjct: 789 NIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEK 848

Query: 472 RGLCVDVSVYRALIRRFCKKEKVDYA 497
            G   +  +  ALIR+   + ++  A
Sbjct: 849 SGTAPNSHMLNALIRKLLDRGEIPRA 874



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 125/450 (27%), Positives = 200/450 (44%), Gaps = 37/450 (8%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           VF QM    + P+      +++ L K +  DM   V++KMV  GV  +   YN +I   C
Sbjct: 247 VFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLC 306

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           K+  VD+ E +  +M  + V+ D  TYNT+I   CK     +A  V  +M  +G+ PD +
Sbjct: 307 KAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNL 366

Query: 272 TYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           TY  +I G C+   +  A  +F+ +  KG  PN+ TY  LI GY      EE ++  + M
Sbjct: 367 TYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEM 426

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEK---------------------- 367
           +A  + P V TY  +L  LCK G+  +A  L + M  K                      
Sbjct: 427 SAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGAL 486

Query: 368 -------------KIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKAL 414
                         I+P++   NT+I AY K       M +  +M + GL  +  TY  L
Sbjct: 487 SEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTL 546

Query: 415 IHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGL 474
           I   CK   +D A      M++ G +P+   ++ LV G C  +  E + +L  E +++G+
Sbjct: 547 IDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGI 606

Query: 475 CVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSD 534
             D+  +  ++   CK+ +V  A+RL + M   G+  D + Y +L   +  A        
Sbjct: 607 RPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVK 666

Query: 535 ILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
           +LD M    L   +  Y +    Y K   I
Sbjct: 667 LLDGMVSAGLKPNIVSYNTLLHGYCKAGRI 696



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 109/381 (28%), Positives = 190/381 (49%), Gaps = 7/381 (1%)

Query: 156 MRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSD 215
           M  + + P+      ++ + AK  + D V  ++ KM Q G+  N+  Y  LI A CK   
Sbjct: 496 MVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGR 555

Query: 216 VDKVEKLLCEMEFKDVRADLFTYNTLIALYCK--KGMHYEALAVQDRMEREGISPDIVTY 273
           VD       +M  + V  +   +N+L+   C   K    E L ++  M  +GI PDIV +
Sbjct: 556 VDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLE--MLNQGIRPDIVFF 613

Query: 274 NSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAA 331
           N+++   C+EGR+ EARRL   +   G  P+ ++Y TLIDG+C A+ ++EA++L + M +
Sbjct: 614 NTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVS 673

Query: 332 KGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTAS 391
            G+ P +V+YN++L   CK GRI +A  L  EM  K + P   T NT++N   + G  + 
Sbjct: 674 AGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSE 733

Query: 392 AMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVD 451
           A ++   M+++  +    TY  ++ GFCK    D A ++   +          +++ ++D
Sbjct: 734 ARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMID 793

Query: 452 GYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILG 511
           G      +E  + L     + GL   V  YR +     ++  ++    LF++M+ +G   
Sbjct: 794 GLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAP 853

Query: 512 DSVIYTSLAYAYWRAGE-PKA 531
           +S +  +L       GE P+A
Sbjct: 854 NSHMLNALIRKLLDRGEIPRA 874



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 111/419 (26%), Positives = 185/419 (44%), Gaps = 51/419 (12%)

Query: 201 HLYNVLIHACCKSSD---VDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKG---MHYEA 254
            L +V+  A C SS    V +  ++L +   K V  D  TY+ +I  +C+ G   + + A
Sbjct: 48  QLLSVVSRAKCSSSSKLAVSRFNRMLRDCSNK-VAPDCCTYSIVIGCFCRIGRLELGFAA 106

Query: 255 LA--------VQD-------------------------RMEREGISPDIVTYNSLIHGFC 281
                     V D                         +M   G    +V+YN+L+ G C
Sbjct: 107 FGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAMHVLLRQMPEVGCRLGVVSYNTLLKGLC 166

Query: 282 REGRMREARRLFRDI-----KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYP 336
              R  EAR L   +        +P+ V+Y  +I+G+     +++A  L   M   GV P
Sbjct: 167 DRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVINGFFNEGQVDKAYSLFLEM---GVSP 223

Query: 337 GVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVK 396
            VVTYN+I+  LCK   +  A  +  +M EK + P+NVT NT+I+  CK  +   A  V 
Sbjct: 224 DVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVF 283

Query: 397 NRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNK 456
            +M++ G+     TY  +I G CKA+ +D A+ +   M+D G  P + +Y+ ++DG C  
Sbjct: 284 QKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKA 343

Query: 457 NNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIY 516
              +    +  + + +G+  D   Y  +I   CK + VD A+ +F  M   G+  ++  Y
Sbjct: 344 QAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTY 403

Query: 517 TSLAYAYWRAGEPKACSDILDDMYRRRL---MITLKIYRSFSASYAKDNEILDLFWSHV 572
             L + Y   G+ +     + +M    L   + T  +   +     K NE   LF S +
Sbjct: 404 NCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMI 462



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 112/465 (24%), Positives = 197/465 (42%), Gaps = 73/465 (15%)

Query: 16  TISAIMLKGHWAK--------LLNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWA 67
           TI  IML G+  K        LLN  +A+ ++    H++           ++ CA+ K A
Sbjct: 471 TIYGIMLHGYGKKGALSEMHDLLNLMVANGISPN--HRIF---------NTVICAYAKRA 519

Query: 68  ESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLST-----PSVLNALVKI 122
                           ++HI  K K    + N++    L D L        +VL     I
Sbjct: 520 MID------------EVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMI 567

Query: 123 HDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTD 182
           ++    N+ V + LV     +   +   ++F +M    + P +     +L +L K+    
Sbjct: 568 NEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVM 627

Query: 183 MVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLI 242
              ++   MV +G+  ++  YN LI   C +S +D+  KLL  M    ++ ++ +YNTL+
Sbjct: 628 EARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLL 687

Query: 243 ALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGATP- 301
             YCK G    A  +   M R+G++P + TYN++++G  R GR  EAR L+ ++  +   
Sbjct: 688 HGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKL 747

Query: 302 -NHVTYTTLIDGYCRANDLEEALRLRE--------------------------------- 327
            +  TY+ ++DG+C+ N  +EA ++ +                                 
Sbjct: 748 WSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDL 807

Query: 328 --VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
              + A G+ P VVTY  I   L +EG + + + L + M +   AP++   N LI     
Sbjct: 808 FAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNALIRKLLD 867

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL 430
            G+   A    +++ E    L+  T   LI  F + +    AK L
Sbjct: 868 RGEIPRAGAYLSKLDEKNFSLEASTTSMLISLFSREEYQQHAKSL 912



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 64/266 (24%), Positives = 111/266 (41%), Gaps = 45/266 (16%)

Query: 358 NRLLNEMNEKKIAPDNVTCNTLINAYCKIG------------------------------ 387
           NR+L + +  K+APD  T + +I  +C+IG                              
Sbjct: 70  NRMLRDCS-NKVAPDCCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKG 128

Query: 388 --DT---ASAMKVKNR-MLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGML---DAG 438
             DT     AM V  R M E G  L   +Y  L+ G C  +  + A+ELL  M+   D+ 
Sbjct: 129 LCDTKRVGEAMHVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSS 188

Query: 439 FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQ 498
            SP   SY+ +++G+ N+   +    L   F+  G+  DV  Y  +I   CK ++VD A+
Sbjct: 189 CSPDVVSYNIVINGFFNEGQVDKAYSL---FLEMGVSPDVVTYNTIIDGLCKAQEVDRAE 245

Query: 499 RLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASY 558
            +F  M   G+  ++V Y ++     +A E      +   M  + +  +   Y +     
Sbjct: 246 DVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGL 305

Query: 559 AKDNEI--LDLFWSHVVDRGLMSKHI 582
            K   +   +  +  ++DRG+   H+
Sbjct: 306 CKAQAVDRAEGVFQQMIDRGVKPDHV 331


>gi|297817834|ref|XP_002876800.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322638|gb|EFH53059.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1010

 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 122/412 (29%), Positives = 206/412 (50%), Gaps = 5/412 (1%)

Query: 132 VLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKM 191
           V   L     +L M ++ +Q F +M+   + P   +C  LL+  AK   TD V + +K M
Sbjct: 27  VFDALFSVLIDLGMVEEAIQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDM 86

Query: 192 VQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMH 251
           +  G    +  YN++I   CK  DV+    L  EM+F+ +  D  TYN++I  + K G  
Sbjct: 87  IGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFGKVGRL 146

Query: 252 YEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTL 309
            + +   + M+     PD++TYN+LI+ FC+ G++ +    FR++K  G  PN V+Y+TL
Sbjct: 147 DDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNVVSYSTL 206

Query: 310 IDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI 369
           +D +C+   +++A++    M   G+ P   TY S++   CK G + DA RL NEM +  +
Sbjct: 207 VDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANEMLQVGV 266

Query: 370 APDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKE 429
             + VT   LI+  C   +    + + + M+E  + +   T+  LI G CK K +  A +
Sbjct: 267 EWNVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNKLVSKAID 326

Query: 430 LLFGML--DAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRR 487
             FG +  D G   +   Y+ ++DG C  N  EA   L ++   +GL  D + Y +L+  
Sbjct: 327 -YFGRISNDFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPDRTAYTSLMDG 385

Query: 488 FCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
             K+  V  A  L + M   G+  D + YTSL +      + +     L++M
Sbjct: 386 NFKQGNVLEALALRDKMVETGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEM 437



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 117/399 (29%), Positives = 193/399 (48%), Gaps = 9/399 (2%)

Query: 162 MPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEK 221
           +P       L + L    + +   + + KM +  V       N L+H   K    D V++
Sbjct: 22  VPGFGVFDALFSVLIDLGMVEEAIQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKR 81

Query: 222 LLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFC 281
              +M     +  +FTYN +I   CK+G    A  + + M+  G+ PD VTYNS+I GF 
Sbjct: 82  FFKDMIGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFG 141

Query: 282 REGRMREARRLFRDIKG--ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVV 339
           + GR+ +    F ++K     P+ +TY  LI+ +C+   L + L     M   G+ P VV
Sbjct: 142 KVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNVV 201

Query: 340 TYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRM 399
           +Y++++   CKEG ++ A +   +M    + P+  T  +LI+AYCKIG+ + A ++ N M
Sbjct: 202 SYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANEM 261

Query: 400 LEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNE 459
           L+ G+  +  TY ALI G C  +       LL  M++     +  ++  L+DG C KN  
Sbjct: 262 LQVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLC-KN-- 318

Query: 460 EALLKLLDEF--VSR--GLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVI 515
           + + K +D F  +S   GL  + ++Y A+I   CK  +V+ A  LF  M   G++ D   
Sbjct: 319 KLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPDRTA 378

Query: 516 YTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSF 554
           YTSL    ++ G       + D M    + + L  Y S 
Sbjct: 379 YTSLMDGNFKQGNVLEALALRDKMVETGMKLDLLAYTSL 417



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 91/305 (29%), Positives = 151/305 (49%), Gaps = 3/305 (0%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           G  P + TYN +I   C+EG +  AR LF ++K  G  P+ VTY ++IDG+ +   L++ 
Sbjct: 90  GAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFGKVGRLDDT 149

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
           +   E M      P V+TYN+++   CK G++        EM    + P+ V+ +TL++A
Sbjct: 150 VCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNVVSYSTLVDA 209

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +CK G    A+K    M   GL+ +++TY +LI  +CK   +  A  L   ML  G   +
Sbjct: 210 FCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANEMLQVGVEWN 269

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ L+DG C   N    L LLDE V   + V V  +  LI   CK + V  A   F 
Sbjct: 270 VVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNKLVSKAIDYFG 329

Query: 503 LMQGN-GILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKD 561
            +  + G+  ++ IYT++     +  + +A + + + M ++ L+     Y S      K 
Sbjct: 330 RISNDFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPDRTAYTSLMDGNFKQ 389

Query: 562 NEILD 566
             +L+
Sbjct: 390 GNVLE 394



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 73/276 (26%), Positives = 141/276 (51%), Gaps = 5/276 (1%)

Query: 134 SWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAK-DRLTDMVWKVYKKMV 192
           S LV  +    M Q  ++ +  MR   L+P+ +  T L+++  K   L+D  +++  +M+
Sbjct: 204 STLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSD-AFRLANEML 262

Query: 193 QLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHY 252
           Q+GV  N+  Y  LI   C   +  +   LL EM   D++  + T+  LI   CK  +  
Sbjct: 263 QVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNKLVS 322

Query: 253 EALAVQDRMERE-GISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTL 309
           +A+    R+  + G+  +   Y ++I G C+  ++  A  LF  +  KG  P+   YT+L
Sbjct: 323 KAIDYFGRISNDFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPDRTAYTSL 382

Query: 310 IDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI 369
           +DG  +  ++ EAL LR+ M   G+   ++ Y S++  L    +++ A   L EM  + I
Sbjct: 383 MDGNFKQGNVLEALALRDKMVETGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGI 442

Query: 370 APDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLM 405
            PD V C +++  + ++G    A+++++ +++  L+
Sbjct: 443 HPDEVLCISVLKKHYELGCINEAVELQSYLMKHQLL 478



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/233 (25%), Positives = 103/233 (44%)

Query: 336 PGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKV 395
           PG   ++++   L   G + +A +  ++M   ++ P   +CN L++ + K+G T    + 
Sbjct: 23  PGFGVFDALFSVLIDLGMVEEAIQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRF 82

Query: 396 KNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCN 455
              M+ AG     FTY  +I   CK  +++ A+ L   M   G  P   +Y+ ++DG+  
Sbjct: 83  FKDMIGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFGK 142

Query: 456 KNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVI 515
               +  +   +E        DV  Y ALI  FCK  K+      F  M+ NG+  + V 
Sbjct: 143 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNVVS 202

Query: 516 YTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLF 568
           Y++L  A+ + G  +       DM R  L+     Y S   +Y K   + D F
Sbjct: 203 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAF 255


>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
          Length = 799

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 123/431 (28%), Positives = 213/431 (49%), Gaps = 5/431 (1%)

Query: 126 PDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVW 185
           P+ N+   + L+         +D  Q+FD+M      P +    ++++        +   
Sbjct: 249 PEKNTCSYNILLKALCTAGRIKDAHQLFDEMASP---PDVVTYGIMVHGYCTLSELETAI 305

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
           K+  +M   G+  N   Y  +I   C    V    +++ +M    V  D   + T+++ +
Sbjct: 306 KLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGF 365

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNH 303
           C+KG    A    D M++ G++ D VTY +LI+G CR G ++EA R+ +++  KG   + 
Sbjct: 366 CRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDA 425

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
           VTYT LIDGYC+   + EA  +   M  K V P VVTY ++   LCK+G +  AN LL+E
Sbjct: 426 VTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHE 485

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
           M  K +  +  T N+LIN  CK G+   AM+    M EAGL  D +TY  +I   C++KE
Sbjct: 486 MCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKE 545

Query: 424 MDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRA 483
           +D A  LL  MLD G  P+  +Y+ L++G+C     E   +LL+  + + +  + + Y +
Sbjct: 546 LDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNS 605

Query: 484 LIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRR 543
           L++++C ++ +     ++  M    ++ +   Y  L   + +A   K       +M  + 
Sbjct: 606 LMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKG 665

Query: 544 LMITLKIYRSF 554
             +T   Y + 
Sbjct: 666 FRLTASSYNAL 676



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 116/371 (31%), Positives = 192/371 (51%), Gaps = 2/371 (0%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D ++V + M +H ++      T +++   +          + +M + G+ A+   Y  LI
Sbjct: 338 DAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALI 397

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           +  C++ ++ + E++L EME K +  D  TY  LI  YCK G   EA  V ++M ++ ++
Sbjct: 398 NGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVT 457

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
           P++VTY +L  G C++G +  A  L  ++  KG   N  TY +LI+G C+A +LE+A+R 
Sbjct: 458 PNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRT 517

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
              M   G+ P V TY +I+  LC+   +  A+ LL EM +K I P  VT N L+N +C 
Sbjct: 518 MIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCM 577

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            G      ++   MLE  +  +  TY +L+  +C  K M    E+  GML     P+  +
Sbjct: 578 SGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENT 637

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+ L+ G+C   N +  L    E + +G  +  S Y ALIR   KK+K   A+RLF  M+
Sbjct: 638 YNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMR 697

Query: 506 GNGILGDSVIY 516
              +  +  +Y
Sbjct: 698 KERLTAEPDVY 708



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 119/437 (27%), Positives = 218/437 (49%), Gaps = 17/437 (3%)

Query: 148 DGLQVFDQMRVHNLMPHLHACT--VLLNSL-AKDRLTDMVWKVYKKMVQLGVVANIHLYN 204
           + +Q+F ++      P  + C+  +LL +L    R+ D     ++   ++    ++  Y 
Sbjct: 240 EAVQLFQEL------PEKNTCSYNILLKALCTAGRIKD----AHQLFDEMASPPDVVTYG 289

Query: 205 VLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMERE 264
           +++H  C  S+++   KLL EM  + +  +   Y ++IAL C +G   +A+ V + M   
Sbjct: 290 IMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMH 349

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEA 322
           G+  D   + +++ GFCR+G +  AR  F ++  +G   + VTYT LI+G CRA +L+EA
Sbjct: 350 GVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEA 409

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            R+ + M  KG+    VTY  ++   CK G++ +A  + N+M +K++ P+ VT   L + 
Sbjct: 410 ERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDG 469

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
            CK GD  +A ++ + M   GL L+ FTY +LI+G CKA  ++ A   +  M +AG  P 
Sbjct: 470 LCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPD 529

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ ++   C     +    LL E + +G+   +  Y  L+  FC   +V+  +RL  
Sbjct: 530 VYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLE 589

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDN 562
            M    I  ++  Y SL   Y      K+ ++I   M  + ++     Y      + K  
Sbjct: 590 WMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKAR 649

Query: 563 EILDL--FWSHVVDRGL 577
            + +   F S ++++G 
Sbjct: 650 NMKEALYFHSEMIEKGF 666



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 96/304 (31%), Positives = 151/304 (49%), Gaps = 2/304 (0%)

Query: 169 TVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEF 228
           TVL++   K       + V+ KMVQ  V  N+  Y  L    CK  DV    +LL EM  
Sbjct: 429 TVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCS 488

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
           K +  ++FTYN+LI   CK G   +A+     M+  G+ PD+ TY ++I   C+   +  
Sbjct: 489 KGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDR 548

Query: 289 ARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILR 346
           A  L +++  KG  P  VTY  L++G+C +  +E   RL E M  K ++P   TYNS+++
Sbjct: 549 AHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMK 608

Query: 347 KLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLML 406
           + C E  ++    +   M  +++ P+  T N LI  +CK  +   A+   + M+E G  L
Sbjct: 609 QYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRL 668

Query: 407 DQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLL 466
              +Y ALI    K K+   A+ L   M     +     Y++ +D   N++N E+ L L 
Sbjct: 669 TASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYIDLSFNEDNLESTLALC 728

Query: 467 DEFV 470
           DE V
Sbjct: 729 DELV 732



 Score =  108 bits (271), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 77/299 (25%), Positives = 140/299 (46%), Gaps = 38/299 (12%)

Query: 144 KMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLY 203
           KMT+  L V ++M    + P++   T L + L K        ++  +M   G+  NI  Y
Sbjct: 440 KMTEAFL-VHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTY 498

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER 263
           N LI+  CK+ ++++  + + +M+   ++ D++TY T+I   C+      A ++   M  
Sbjct: 499 NSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLD 558

Query: 264 EGISPDIVTYNSLIHGFCREGRMREARRLF-------------------------RDIKG 298
           +GI P IVTYN L++GFC  GR+   +RL                          +++K 
Sbjct: 559 KGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKS 618

Query: 299 AT------------PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILR 346
            T            PN  TY  LI G+C+A +++EAL     M  KG      +YN+++R
Sbjct: 619 TTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIR 678

Query: 347 KLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLM 405
            L K+ +  +A RL  +M ++++  +    N  I+      +  S + + + ++E  L+
Sbjct: 679 LLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYIDLSFNEDNLESTLALCDELVEVTLV 737


>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
          Length = 799

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 123/431 (28%), Positives = 213/431 (49%), Gaps = 5/431 (1%)

Query: 126 PDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVW 185
           P+ N+   + L+         +D  Q+FD+M      P +    ++++        +   
Sbjct: 249 PEKNTCSYNILLKALCTAGRIKDAHQLFDEMASP---PDVVTYGIMVHGYCTLSELETAI 305

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
           K+  +M   G+  N   Y  +I   C    V    +++ +M    V  D   + T+++ +
Sbjct: 306 KLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGF 365

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNH 303
           C+KG    A    D M++ G++ D VTY +LI+G CR G ++EA R+ +++  KG   + 
Sbjct: 366 CRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDA 425

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
           VTYT LIDGYC+   + EA  +   M  K V P VVTY ++   LCK+G +  AN LL+E
Sbjct: 426 VTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHE 485

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
           M  K +  +  T N+LIN  CK G+   AM+    M EAGL  D +TY  +I   C++KE
Sbjct: 486 MCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKE 545

Query: 424 MDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRA 483
           +D A  LL  MLD G  P+  +Y+ L++G+C     E   +LL+  + + +  + + Y +
Sbjct: 546 LDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNS 605

Query: 484 LIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRR 543
           L++++C ++ +     ++  M    ++ +   Y  L   + +A   K       +M  + 
Sbjct: 606 LMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKG 665

Query: 544 LMITLKIYRSF 554
             +T   Y + 
Sbjct: 666 FRLTASSYNAL 676



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 116/371 (31%), Positives = 193/371 (52%), Gaps = 2/371 (0%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D ++V + M +H ++      T +++   +          + +M + G+ A+   Y  LI
Sbjct: 338 DAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALI 397

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           +  C++ ++ + E++L EME K +  D  TY  LI  YCK G   EA  V ++M ++ ++
Sbjct: 398 NGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVT 457

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
           P++VTY +L  G C++G +  A  L  ++  KG   N  TY +LI+G C+A +LE+A+R 
Sbjct: 458 PNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRT 517

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
              M   G+ P V TY +I+  LC+   +  A+ LL EM +K I P  VT N L+N +C 
Sbjct: 518 MIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCM 577

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            G      ++   MLE  +  +  TY +L+  +C  K M    E+  GML     P+  +
Sbjct: 578 SGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENT 637

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+ L+ G+C   N +  L    E + +G  +  S Y ALIR   KK+K   A+RLF  M+
Sbjct: 638 YNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMR 697

Query: 506 GNGILGDSVIY 516
            + +  +  +Y
Sbjct: 698 KDRLTAEPDVY 708



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 119/437 (27%), Positives = 218/437 (49%), Gaps = 17/437 (3%)

Query: 148 DGLQVFDQMRVHNLMPHLHACT--VLLNSL-AKDRLTDMVWKVYKKMVQLGVVANIHLYN 204
           + +Q+F ++      P  + C+  +LL +L    R+ D     ++   ++    ++  Y 
Sbjct: 240 EAVQLFQEL------PEKNTCSYNILLKALCTAGRIKD----AHQLFDEMASPPDVVTYG 289

Query: 205 VLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMERE 264
           +++H  C  S+++   KLL EM  + +  +   Y ++IAL C +G   +A+ V + M   
Sbjct: 290 IMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMH 349

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEA 322
           G+  D   + +++ GFCR+G +  AR  F ++  +G   + VTYT LI+G CRA +L+EA
Sbjct: 350 GVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEA 409

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            R+ + M  KG+    VTY  ++   CK G++ +A  + N+M +K++ P+ VT   L + 
Sbjct: 410 ERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDG 469

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
            CK GD  +A ++ + M   GL L+ FTY +LI+G CKA  ++ A   +  M +AG  P 
Sbjct: 470 LCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPD 529

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ ++   C     +    LL E + +G+   +  Y  L+  FC   +V+  +RL  
Sbjct: 530 VYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLE 589

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDN 562
            M    I  ++  Y SL   Y      K+ ++I   M  + ++     Y      + K  
Sbjct: 590 WMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKAR 649

Query: 563 EILDL--FWSHVVDRGL 577
            + +   F S ++++G 
Sbjct: 650 NMKEALYFHSEMIEKGF 666



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 86/329 (26%), Positives = 149/329 (45%), Gaps = 38/329 (11%)

Query: 144 KMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLY 203
           KMT+  L V ++M    + P++   T L + L K        ++  +M   G+  NI  Y
Sbjct: 440 KMTEAFL-VHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTY 498

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER 263
           N LI+  CK+ ++++  + + +M+   ++ D++TY T+I   C+      A ++   M  
Sbjct: 499 NSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLD 558

Query: 264 EGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEE 321
           +GI P IVTYN L++GFC  GR+   +RL   +  K   PN  TY +L+  YC   +++ 
Sbjct: 559 KGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKS 618

Query: 322 ALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
              + + M ++ V P   TYN +++  CK   +++                         
Sbjct: 619 TTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKE------------------------- 653

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
                     A+   + M+E G  L   +Y ALI    K K+   A+ L   M     + 
Sbjct: 654 ----------ALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKDRLTA 703

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFV 470
               Y++ +D   N++N E+ L L DE V
Sbjct: 704 EPDVYNFYIDLSFNEDNLESTLALCDELV 732


>gi|302792250|ref|XP_002977891.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
 gi|300154594|gb|EFJ21229.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
          Length = 385

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 111/326 (34%), Positives = 181/326 (55%), Gaps = 8/326 (2%)

Query: 203 YNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRME 262
           YN LI   CK+    +   LL EM +     D+FTY TLI  +CK     +AL V +++ 
Sbjct: 57  YNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLV 116

Query: 263 REGISPDIVTYNSLIHGFCREGRMREARRLF-RDIKGAT--PNHVTYTTLIDGYCRANDL 319
             G  PD+VTY+ LI G C+EGR++EA  LF R IK  +  PN VTY +LI G+CR   +
Sbjct: 117 ARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKM 176

Query: 320 EEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTL 379
           +EA+ L E MA  G  P VVTY +++   CK  R+ DA  LLN+M  K + P+ VT  +L
Sbjct: 177 DEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTSL 236

Query: 380 INAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGF 439
           ++  C+    + A+ +   M         +TY  ++ G+C+  +++ A++ +   +D   
Sbjct: 237 MDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFMLEEMDC-- 294

Query: 440 SPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQR 499
            P+  S++ ++ G C  N     ++L++E   R    DV +Y  +I   C+++KVD A R
Sbjct: 295 PPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKKVDEACR 354

Query: 500 LF-NLMQGNGILGDSVIYTSLAYAYW 524
           ++  +++  G L +S+ Y++  + YW
Sbjct: 355 VYRKMLEEPGCLPNSITYST--FDYW 378



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 89/249 (35%), Positives = 137/249 (55%), Gaps = 7/249 (2%)

Query: 256 AVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGY 313
           AVQD  E     P  VTYNSLI G C+  R  EA  L  ++   G  P+  TYTTLI G+
Sbjct: 44  AVQDAEE----VPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGF 99

Query: 314 CRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM-NEKKIAPD 372
           C++   ++ALR+ E + A+G  P VVTY+ ++  LCKEGR+++A  L   M       P+
Sbjct: 100 CKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPN 159

Query: 373 NVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLF 432
            VT N+LI+ +C++G    AM +  RM E G   D  TY  L++GFCK   +D A +LL 
Sbjct: 160 TVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLN 219

Query: 433 GMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKE 492
            M   G +P+  +++ L+DG C +N     + +L E   +     V  Y  ++  +C+  
Sbjct: 220 QMTRKGLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVN 279

Query: 493 KVDYAQRLF 501
           +++ A++  
Sbjct: 280 QLEEARKFM 288



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 114/229 (49%), Gaps = 1/229 (0%)

Query: 301 PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRL 360
           P  VTY +LI G C+A    EA  L E M   G  P + TY +++   CK  +  DA R+
Sbjct: 52  PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRV 111

Query: 361 LNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAG-LMLDQFTYKALIHGFC 419
             ++  +   PD VT + LI+  CK G    A+ +  RM+++G  M +  TY +LI GFC
Sbjct: 112 FEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFC 171

Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
           +  +MD A  LL  M + G SP   +Y+ L++G+C     +    LL++   +GL  +V 
Sbjct: 172 RMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVV 231

Query: 480 VYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
            + +L+   C++ ++  A  +   M+          Y ++   Y R  +
Sbjct: 232 TFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQ 280



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 72/230 (31%), Positives = 107/230 (46%), Gaps = 1/230 (0%)

Query: 336 PGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKV 395
           P  VTYNS++  LCK  R  +A  LL EM      PD  T  TLI  +CK   +  A++V
Sbjct: 52  PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRV 111

Query: 396 KNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFS-PSYCSYSWLVDGYC 454
             +++  G   D  TY  LI G CK   +  A +L   M+ +G   P+  +Y+ L+ G+C
Sbjct: 112 FEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFC 171

Query: 455 NKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSV 514
                +  + LL+     G   DV  Y  L+  FCK  ++D A  L N M   G+  + V
Sbjct: 172 RMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVV 231

Query: 515 IYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
            +TSL     R         IL +M R+    T+  Y +    Y + N++
Sbjct: 232 TFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQL 281



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 70/281 (24%), Positives = 129/281 (45%), Gaps = 37/281 (13%)

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           L+  +   K + D L+VF+Q+      P +   + L++ L K+        ++ +M++ G
Sbjct: 95  LITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSG 154

Query: 196 -VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEA 254
             + N   YN LI   C+   +D+   LL  M       D+ TY TL+  +CK     +A
Sbjct: 155 SCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDA 214

Query: 255 LAVQDRMEREGISPDIVT-----------------------------------YNSLIHG 279
             + ++M R+G++P++VT                                   YN+++ G
Sbjct: 215 YDLLNQMTRKGLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDG 274

Query: 280 FCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVV 339
           +CR  ++ EAR+   +     PN V++  +I G C+ N   EA+ L E    +   P VV
Sbjct: 275 YCRVNQLEEARKFMLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVV 334

Query: 340 TYNSILRKLCKEGRIRDANRLLNEM-NEKKIAPDNVTCNTL 379
            Y +++  LC+E ++ +A R+  +M  E    P+++T +T 
Sbjct: 335 MYTTVIDVLCREKKVDEACRVYRKMLEEPGCLPNSITYSTF 375



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 95/197 (48%), Gaps = 1/197 (0%)

Query: 371 PDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL 430
           P  VT N+LI+  CK    + A  +   M+ +G + D FTY  LI GFCK+K+ D A  +
Sbjct: 52  PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRV 111

Query: 431 LFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSV-YRALIRRFC 489
              ++  GF P   +YS L+DG C +   +  + L    +  G C+  +V Y +LI  FC
Sbjct: 112 FEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFC 171

Query: 490 KKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLK 549
           +  K+D A  L   M   G   D V YT+L   + +        D+L+ M R+ L   + 
Sbjct: 172 RMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVV 231

Query: 550 IYRSFSASYAKDNEILD 566
            + S      ++N + D
Sbjct: 232 TFTSLMDGLCRENRLSD 248



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 54/219 (24%), Positives = 103/219 (47%), Gaps = 5/219 (2%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N+   + L+  +  +    + + + ++M      P +   T L+N   K    D  + + 
Sbjct: 159 NTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLL 218

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
            +M + G+  N+  +  L+   C+ + +     +L EM  K     ++TYNT++  YC+ 
Sbjct: 219 NQMTRKGLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRV 278

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTY 306
               EA      +E     P++V++N +I G C+  R  EA  L  +   +   P+ V Y
Sbjct: 279 NQLEEARKFM--LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMY 336

Query: 307 TTLIDGYCRANDLEEALRL-REVMAAKGVYPGVVTYNSI 344
           TT+ID  CR   ++EA R+ R+++   G  P  +TY++ 
Sbjct: 337 TTVIDVLCREKKVDEACRVYRKMLEEPGCLPNSITYSTF 375



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 46/106 (43%)

Query: 436 DAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVD 495
           DA   P+  +Y+ L+ G C          LL+E V  G   D+  Y  LI  FCK +K D
Sbjct: 47  DAEEVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSD 106

Query: 496 YAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
            A R+F  +   G   D V Y+ L     + G  K   D+   M +
Sbjct: 107 DALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIK 152


>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 586

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 127/474 (26%), Positives = 225/474 (47%), Gaps = 17/474 (3%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           SVL  ++K+   PD  +   + L+          D L +FD+M      P++     L+N
Sbjct: 125 SVLAKILKLGHQPD--TATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLIN 182

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
            L K   T+   ++ + M Q     ++ +Y  +I + CK   V +   L  +M  + +  
Sbjct: 183 GLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISP 242

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRL- 292
           D+FTY +LI   C          + ++M    I PD+V +++++   C+EG++ EA  + 
Sbjct: 243 DIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVV 302

Query: 293 -FRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
               I+G  PN VTY  L+DG+C  ++++EA+++ + M   G  P V++YN+++   CK 
Sbjct: 303 DMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKI 362

Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
            R+  A  L  EM +K++ P+ VT NTL++  C +G    A+ + + M+  G + D  TY
Sbjct: 363 QRMDKATYLFEEMCQKELIPNTVTYNTLMHX-CHVGRLQDAIALFHEMVAHGQIPDLATY 421

Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
           + L+   CK   +D A  LL  +  +   P    Y+ ++DG C     EA   +     S
Sbjct: 422 RILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSS 481

Query: 472 RGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKA 531
           +GL  +V  Y  +I   C++  +D A +LF  M GNG   D   Y ++     +  E   
Sbjct: 482 KGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALR 541

Query: 532 CSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKE 585
              +L +M          + R FSA  +    ++++     +D+ +  K I  E
Sbjct: 542 AIQLLQEM----------LARGFSADVSTTTLLVEMLCDDKLDQSV--KQILSE 583



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 119/440 (27%), Positives = 211/440 (47%), Gaps = 5/440 (1%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           S  N ++ +H  P  ++   + L+   A  K       + +QM    + P ++   +L+N
Sbjct: 55  SSFNRMLHMHPPP--STVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILIN 112

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
           S          + V  K+++LG   +   +  LI   C    +     L  +M  +  + 
Sbjct: 113 SFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQP 172

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           ++ TY TLI   CK G    A+ +   ME+    PD+V Y S+I   C++ ++ EA  LF
Sbjct: 173 NVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLF 232

Query: 294 RDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
             +  +G +P+  TYT+LI   C   + +    L   M    + P VV +++++  LCKE
Sbjct: 233 SKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKE 292

Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
           G+I +A+ +++ M  + + P+ VT N L++ +C   +   A+KV + M+  G   +  +Y
Sbjct: 293 GKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISY 352

Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
             LI+G+CK + MD A  L   M      P+  +Y+ L+   C+    +  + L  E V+
Sbjct: 353 NTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMH-XCHVGRLQDAIALFHEMVA 411

Query: 472 RGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKA 531
            G   D++ YR L+   CKK  +D A  L   ++G+ +  D  IYT +     RAGE +A
Sbjct: 412 HGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEA 471

Query: 532 CSDILDDMYRRRLMITLKIY 551
             DI  ++  + L   ++ Y
Sbjct: 472 ARDIFSNLSSKGLRPNVRTY 491



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 135/497 (27%), Positives = 225/497 (45%), Gaps = 70/497 (14%)

Query: 46  VLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIA 105
           +L+N +  CH+  L  AF   A+     ++    +  T+I  L        A ++ +K+ 
Sbjct: 109 ILINSF--CHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMI 166

Query: 106 LRDF----LSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNL 161
              F    ++  +++N L K+     GN                T   +++   M   N 
Sbjct: 167 GEGFQPNVVTYGTLINGLCKV-----GN----------------TNAAIRLLRSMEQGNC 205

Query: 162 MPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEK 221
            P +   T +++SL KDR     + ++ KMV  G+  +I  Y  LIH+ C   +   V  
Sbjct: 206 QPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTT 265

Query: 222 LLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFC 281
           LL +M    +  D+  ++T++   CK+G   EA  V D M   G+ P++VTYN+L+ G C
Sbjct: 266 LLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHC 325

Query: 282 REGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVV 339
            +  M EA ++F  +   G  PN ++Y TLI+GYC+   +++A  L E M  K + P  V
Sbjct: 326 LQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTV 385

Query: 340 TYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTL-------------------- 379
           TYN+++   C  GR++DA  L +EM      PD  T   L                    
Sbjct: 386 TYNTLMHX-CHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTI 444

Query: 380 ---------------INAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEM 424
                          I+  C+ G+  +A  + + +   GL  +  TY  +I+G C+   +
Sbjct: 445 EGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLL 504

Query: 425 DIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEAL--LKLLDEFVSRGLCVDVSVYR 482
           D A +L   M   G SP  C+Y+ +  G     N+EAL  ++LL E ++RG   DVS   
Sbjct: 505 DEANKLFMEMDGNGCSPDGCTYNTITQGLL--QNKEALRAIQLLQEMLARGFSADVSTTT 562

Query: 483 ALIRRFCKKEKVDYAQR 499
            L+   C  +K+D + +
Sbjct: 563 LLVEMLC-DDKLDQSVK 578



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 91/319 (28%), Positives = 153/319 (47%), Gaps = 2/319 (0%)

Query: 238 YNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK 297
           +N L+    K   +    ++ ++M+  GI PD+ T N LI+ FC   R+  A  +   I 
Sbjct: 72  FNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRLGFAFSVLAKIL 131

Query: 298 --GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIR 355
             G  P+  T+TTLI G C    + +AL L + M  +G  P VVTY +++  LCK G   
Sbjct: 132 KLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTN 191

Query: 356 DANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALI 415
            A RLL  M +    PD V   ++I++ CK      A  + ++M+  G+  D FTY +LI
Sbjct: 192 AAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLI 251

Query: 416 HGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLC 475
           H  C   E      LL  M+++   P    +S +VD  C +        ++D  + RG+ 
Sbjct: 252 HSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVE 311

Query: 476 VDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDI 535
            +V  Y AL+   C + ++D A ++F+ M  NG   + + Y +L   Y +       + +
Sbjct: 312 PNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYL 371

Query: 536 LDDMYRRRLMITLKIYRSF 554
            ++M ++ L+     Y + 
Sbjct: 372 FEEMCQKELIPNTVTYNTL 390



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 90/321 (28%), Positives = 161/321 (50%), Gaps = 3/321 (0%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           + +QM    +MP +   + ++++L K+        V   M+  GV  N+  YN L+   C
Sbjct: 266 LLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHC 325

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
             S++D+  K+   M       ++ +YNTLI  YCK     +A  + + M ++ + P+ V
Sbjct: 326 LQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTV 385

Query: 272 TYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           TYN+L+H  C  GR+++A  LF ++   G  P+  TY  L+D  C+ + L+EA+ L + +
Sbjct: 386 TYNTLMH-XCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTI 444

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
               + P +  Y  ++  +C+ G +  A  + + ++ K + P+  T   +IN  C+ G  
Sbjct: 445 EGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLL 504

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
             A K+   M   G   D  TY  +  G  + KE   A +LL  ML  GFS    + + L
Sbjct: 505 DEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLL 564

Query: 450 VDGYCNKNNEEALLKLLDEFV 470
           V+  C+   ++++ ++L EFV
Sbjct: 565 VEMLCDDKLDQSVKQILSEFV 585



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 79/310 (25%), Positives = 139/310 (44%), Gaps = 2/310 (0%)

Query: 253 EALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR--DIKGATPNHVTYTTLI 310
           +AL+  +RM      P  V +N L+    +  +      L    D  G  P+  T   LI
Sbjct: 52  DALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILI 111

Query: 311 DGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIA 370
           + +C  N L  A  +   +   G  P   T+ +++R LC EG+I DA  L ++M  +   
Sbjct: 112 NSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQ 171

Query: 371 PDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL 430
           P+ VT  TLIN  CK+G+T +A+++   M +     D   Y ++I   CK +++  A  L
Sbjct: 172 PNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNL 231

Query: 431 LFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCK 490
              M+  G SP   +Y+ L+   CN    + +  LL++ ++  +  DV ++  ++   CK
Sbjct: 232 FSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCK 291

Query: 491 KEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKI 550
           + K+  A  + ++M   G+  + V Y +L   +    E      + D M        +  
Sbjct: 292 EGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVIS 351

Query: 551 YRSFSASYAK 560
           Y +    Y K
Sbjct: 352 YNTLINGYCK 361



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 74/250 (29%), Positives = 116/250 (46%)

Query: 317 NDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTC 376
           N L++AL     M      P  V +N +L  + K  +      L N+M+   I PD  T 
Sbjct: 48  NTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTL 107

Query: 377 NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD 436
           N LIN++C +     A  V  ++L+ G   D  T+  LI G C   ++  A  L   M+ 
Sbjct: 108 NILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIG 167

Query: 437 AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDY 496
            GF P+  +Y  L++G C   N  A ++LL          DV VY ++I   CK  +V  
Sbjct: 168 EGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTE 227

Query: 497 AQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSA 556
           A  LF+ M G GI  D   YTSL ++     E K  + +L+ M   ++M  + I+ +   
Sbjct: 228 AFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVD 287

Query: 557 SYAKDNEILD 566
           +  K+ +I +
Sbjct: 288 ALCKEGKITE 297



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 63/264 (23%), Positives = 110/264 (41%)

Query: 301 PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRL 360
           P+ V +  L+    +         L   M + G+ P V T N ++   C   R+  A  +
Sbjct: 67  PSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRLGFAFSV 126

Query: 361 LNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCK 420
           L ++ +    PD  T  TLI   C  G    A+ + ++M+  G   +  TY  LI+G CK
Sbjct: 127 LAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCK 186

Query: 421 AKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSV 480
               + A  LL  M      P    Y+ ++D  C          L  + V +G+  D+  
Sbjct: 187 VGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFT 246

Query: 481 YRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMY 540
           Y +LI   C   +  +   L N M  + I+ D VI++++  A  + G+     D++D M 
Sbjct: 247 YTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMI 306

Query: 541 RRRLMITLKIYRSFSASYAKDNEI 564
            R +   +  Y +    +   +E+
Sbjct: 307 IRGVEPNVVTYNALMDGHCLQSEM 330



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/202 (24%), Positives = 83/202 (41%), Gaps = 3/202 (1%)

Query: 392 AMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVD 451
           A+   NRML          +  L+    K K+      L   M   G  P   + + L++
Sbjct: 53  ALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILIN 112

Query: 452 GYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILG 511
            +C+ N       +L + +  G   D + +  LIR  C + K+  A  LF+ M G G   
Sbjct: 113 SFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQP 172

Query: 512 DSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLF--W 569
           + V Y +L     + G   A   +L  M +      + +Y S   S  KD ++ + F  +
Sbjct: 173 NVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLF 232

Query: 570 SHVVDRGLMSKHIFKEMQLRNS 591
           S +V +G+ S  IF    L +S
Sbjct: 233 SKMVGQGI-SPDIFTYTSLIHS 253


>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 763

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 113/383 (29%), Positives = 195/383 (50%), Gaps = 2/383 (0%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           +G ++F +M    +   L     LL+ L K        K+  K+++ GV+ N+  YN  I
Sbjct: 199 EGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFI 258

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
              C+  ++D   +++  +  +  + D+ TYN LI   CK     EA     ++  EG+ 
Sbjct: 259 QGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLE 318

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEALRL 325
           PD  TYN+LI G+C+ G ++ A R+  +    G  P+  TY +LIDG C   +   AL L
Sbjct: 319 PDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALAL 378

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
                 KG+ P V+ YN++++ L  +G I +A +L +EM+EK + P+  T N L+N  CK
Sbjct: 379 FNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCK 438

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
           +G  + A  +   M+  G   D FT+  LIHG+    +M+ A E+L  M+D G  P   +
Sbjct: 439 MGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYT 498

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+ L++G C  +  E +++     V +G   ++  +  L+   C+  K+D A  L   M+
Sbjct: 499 YNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMK 558

Query: 506 GNGILGDSVIYTSLAYAYWRAGE 528
              +  D+V + +L   + + G+
Sbjct: 559 NKSVNPDAVTFGTLIDGFCKNGD 581



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 111/357 (31%), Positives = 180/357 (50%), Gaps = 2/357 (0%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           ++ D++    ++P+L      +  L +    D   ++  +++  G   ++  YN LI+  
Sbjct: 237 KLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGL 296

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           CK+S   + E  L ++  + +  D FTYNTLIA YCK GM   A  +       G  PD 
Sbjct: 297 CKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDE 356

Query: 271 VTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
            TY SLI G C EG    A  LF +   KG  PN + Y TLI G      + EA +L   
Sbjct: 357 FTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASE 416

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M+ KG+ P V T+N ++  LCK G + DA+ L+  M  K   PD  T N LI+ Y     
Sbjct: 417 MSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLK 476

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
             +A+++ + M++ G+  D +TY +L++G CK  + +   E    M++ G +P+  +++ 
Sbjct: 477 MENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNI 536

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           L++  C  +  +  L LL+E  ++ +  D   +  LI  FCK   +D A  LF  M+
Sbjct: 537 LLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKME 593



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 122/512 (23%), Positives = 233/512 (45%), Gaps = 28/512 (5%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHV 132
            +KH+L ++ ++I  L     F++ + +L  + +R  +                   +H+
Sbjct: 35  GFKHTLSTYRSIIEKLGLYGKFEAMEEVL--VDMRQNVG------------------NHM 74

Query: 133 LSWLVIF----YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           L  + +     Y      Q+ + VF++M  ++  P + +   +++ L      D   KVY
Sbjct: 75  LEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVY 134

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
            +M   G+  +++ + + + + C++S      +LL  M  +    ++  Y T++  + ++
Sbjct: 135 MRMRDRGITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEE 194

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTY 306
               E   +  +M   G+S  + T+N L+H  C++G ++E  +L   +  +G  PN  TY
Sbjct: 195 NFKDEGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTY 254

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
              I G C+  +L+ A+R+   +  +G  P VVTYN ++  LCK  + ++A   L ++  
Sbjct: 255 NFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVN 314

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
           + + PD+ T NTLI  YCK G    A ++    +  G + D+FTY++LI G C   E + 
Sbjct: 315 EGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNR 374

Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
           A  L    L  G  P+   Y+ L+ G  N+       +L  E   +GL  +V  +  L+ 
Sbjct: 375 ALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVN 434

Query: 487 RFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMI 546
             CK   V  A  L  +M   G   D   +  L + Y    + +   +ILD M    +  
Sbjct: 435 GLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDP 494

Query: 547 TLKIYRSFSASYAKDNEILDLFWSH--VVDRG 576
            +  Y S      K ++  D+  ++  +V++G
Sbjct: 495 DVYTYNSLLNGLCKTSKYEDVMETYKTMVEKG 526



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 117/443 (26%), Positives = 204/443 (46%), Gaps = 20/443 (4%)

Query: 75  KHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLS 134
           K  + ++  +I+ L KN  F+ A+  L K               LV    +PD  S   +
Sbjct: 283 KPDVVTYNYLIYGLCKNSKFQEAEVYLGK---------------LVNEGLEPD--SFTYN 325

Query: 135 WLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQL 194
            L+  Y    M Q   ++      +  +P       L++ L  +  T+    ++ + +  
Sbjct: 326 TLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGK 385

Query: 195 GVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEA 254
           G+  N+ LYN LI        + +  +L  EM  K +  ++ T+N L+   CK G   +A
Sbjct: 386 GIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDA 445

Query: 255 LAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDG 312
             +   M  +G  PDI T+N LIHG+  + +M  A  +   +   G  P+  TY +L++G
Sbjct: 446 DGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNG 505

Query: 313 YCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPD 372
            C+ +  E+ +   + M  KG  P + T+N +L  LC+  ++  A  LL EM  K + PD
Sbjct: 506 LCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPD 565

Query: 373 NVTCNTLINAYCKIGDTASAMKVKNRMLEAGLM-LDQFTYKALIHGFCKAKEMDIAKELL 431
            VT  TLI+ +CK GD   A  +  +M E  ++     TY  +IH F +   + +A++L 
Sbjct: 566 AVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLF 625

Query: 432 FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
             M+D    P   +Y  +VDG+C   N +   K L E +  G    ++    +I   C +
Sbjct: 626 QEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMMENGFIPSLTTLGRVINCLCVE 685

Query: 492 EKVDYAQRLFNLMQGNGILGDSV 514
           ++V  A  + + M   G++ ++V
Sbjct: 686 DRVYEAAGIIHRMVQKGLVPEAV 708



 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 75/312 (24%), Positives = 136/312 (43%), Gaps = 4/312 (1%)

Query: 253 EALAVQDRMERE-GISPDIVTYNSLIHGFCREGRMREARRLFRDIKGATPNHV---TYTT 308
           +AL + + M +E G    + TY S+I      G+      +  D++    NH+    Y  
Sbjct: 22  KALEMFNSMRKEDGFKHTLSTYRSIIEKLGLYGKFEAMEEVLVDMRQNVGNHMLEGVYVG 81

Query: 309 LIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKK 368
            +  Y R   ++EA+ + E M      P V +YN+I+  L   G    A+++   M ++ 
Sbjct: 82  AMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRMRDRG 141

Query: 369 IAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAK 428
           I PD  +    + ++C+     +A+++ N M   G  ++   Y  ++ GF +    D   
Sbjct: 142 ITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGY 201

Query: 429 ELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRF 488
           EL   ML +G S    +++ L+   C K + +   KLLD+ + RG+  ++  Y   I+  
Sbjct: 202 ELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGL 261

Query: 489 CKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITL 548
           C+K ++D A R+   +   G   D V Y  L Y   +  + +     L  +    L    
Sbjct: 262 CQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDS 321

Query: 549 KIYRSFSASYAK 560
             Y +  A Y K
Sbjct: 322 FTYNTLIAGYCK 333


>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
 gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
 gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
 gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
 gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 754

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 123/431 (28%), Positives = 213/431 (49%), Gaps = 5/431 (1%)

Query: 126 PDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVW 185
           P+ N+   + L+         +D  Q+FD+M      P +    ++++        +   
Sbjct: 249 PEKNTCSYNILLKALCTAGRIKDAHQLFDEMASP---PDVVTYGIMVHGYCTLSELETAI 305

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
           K+  +M   G+  N   Y  +I   C    V    +++ +M    V  D   + T+++ +
Sbjct: 306 KLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGF 365

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNH 303
           C+KG    A    D M++ G++ D VTY +LI+G CR G ++EA R+ +++  KG   + 
Sbjct: 366 CRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDA 425

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
           VTYT LIDGYC+   + EA  +   M  K V P VVTY ++   LCK+G +  AN LL+E
Sbjct: 426 VTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHE 485

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
           M  K +  +  T N+LIN  CK G+   AM+    M EAGL  D +TY  +I   C++KE
Sbjct: 486 MCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKE 545

Query: 424 MDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRA 483
           +D A  LL  MLD G  P+  +Y+ L++G+C     E   +LL+  + + +  + + Y +
Sbjct: 546 LDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNS 605

Query: 484 LIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRR 543
           L++++C ++ +     ++  M    ++ +   Y  L   + +A   K       +M  + 
Sbjct: 606 LMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKG 665

Query: 544 LMITLKIYRSF 554
             +T   Y + 
Sbjct: 666 FRLTASSYNAL 676



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 116/371 (31%), Positives = 192/371 (51%), Gaps = 2/371 (0%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D ++V + M +H ++      T +++   +          + +M + G+ A+   Y  LI
Sbjct: 338 DAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALI 397

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           +  C++ ++ + E++L EME K +  D  TY  LI  YCK G   EA  V ++M ++ ++
Sbjct: 398 NGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVT 457

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
           P++VTY +L  G C++G +  A  L  ++  KG   N  TY +LI+G C+A +LE+A+R 
Sbjct: 458 PNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRT 517

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
              M   G+ P V TY +I+  LC+   +  A+ LL EM +K I P  VT N L+N +C 
Sbjct: 518 MIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCM 577

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            G      ++   MLE  +  +  TY +L+  +C  K M    E+  GML     P+  +
Sbjct: 578 SGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENT 637

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+ L+ G+C   N +  L    E + +G  +  S Y ALIR   KK+K   A+RLF  M+
Sbjct: 638 YNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMR 697

Query: 506 GNGILGDSVIY 516
              +  +  +Y
Sbjct: 698 KERLTAEPDVY 708



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 119/437 (27%), Positives = 218/437 (49%), Gaps = 17/437 (3%)

Query: 148 DGLQVFDQMRVHNLMPHLHACT--VLLNSL-AKDRLTDMVWKVYKKMVQLGVVANIHLYN 204
           + +Q+F ++      P  + C+  +LL +L    R+ D     ++   ++    ++  Y 
Sbjct: 240 EAVQLFQEL------PEKNTCSYNILLKALCTAGRIKD----AHQLFDEMASPPDVVTYG 289

Query: 205 VLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMERE 264
           +++H  C  S+++   KLL EM  + +  +   Y ++IAL C +G   +A+ V + M   
Sbjct: 290 IMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMH 349

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEA 322
           G+  D   + +++ GFCR+G +  AR  F ++  +G   + VTYT LI+G CRA +L+EA
Sbjct: 350 GVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEA 409

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            R+ + M  KG+    VTY  ++   CK G++ +A  + N+M +K++ P+ VT   L + 
Sbjct: 410 ERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDG 469

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
            CK GD  +A ++ + M   GL L+ FTY +LI+G CKA  ++ A   +  M +AG  P 
Sbjct: 470 LCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPD 529

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ ++   C     +    LL E + +G+   +  Y  L+  FC   +V+  +RL  
Sbjct: 530 VYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLE 589

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDN 562
            M    I  ++  Y SL   Y      K+ ++I   M  + ++     Y      + K  
Sbjct: 590 WMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKAR 649

Query: 563 EILDL--FWSHVVDRGL 577
            + +   F S ++++G 
Sbjct: 650 NMKEALYFHSEMIEKGF 666



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 96/304 (31%), Positives = 151/304 (49%), Gaps = 2/304 (0%)

Query: 169 TVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEF 228
           TVL++   K       + V+ KMVQ  V  N+  Y  L    CK  DV    +LL EM  
Sbjct: 429 TVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCS 488

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
           K +  ++FTYN+LI   CK G   +A+     M+  G+ PD+ TY ++I   C+   +  
Sbjct: 489 KGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDR 548

Query: 289 ARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILR 346
           A  L +++  KG  P  VTY  L++G+C +  +E   RL E M  K ++P   TYNS+++
Sbjct: 549 AHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMK 608

Query: 347 KLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLML 406
           + C E  ++    +   M  +++ P+  T N LI  +CK  +   A+   + M+E G  L
Sbjct: 609 QYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRL 668

Query: 407 DQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLL 466
              +Y ALI    K K+   A+ L   M     +     Y++ +D   N++N E+ L L 
Sbjct: 669 TASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYIDLSFNEDNLESTLALC 728

Query: 467 DEFV 470
           DE V
Sbjct: 729 DELV 732



 Score =  108 bits (270), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 73/285 (25%), Positives = 132/285 (46%), Gaps = 39/285 (13%)

Query: 127 DGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWK 186
           D ++   + L+  Y  +    +   V ++M    + P++   T L + L K        +
Sbjct: 422 DVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANE 481

Query: 187 VYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYC 246
           +  +M   G+  NI  YN LI+  CK+ ++++  + + +M+   ++ D++TY T+I   C
Sbjct: 482 LLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALC 541

Query: 247 KKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF------------- 293
           +      A ++   M  +GI P IVTYN L++GFC  GR+   +RL              
Sbjct: 542 QSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTT 601

Query: 294 ------------RDIKGAT------------PNHVTYTTLIDGYCRANDLEEALRLREVM 329
                       +++K  T            PN  TY  LI G+C+A +++EAL     M
Sbjct: 602 TYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEM 661

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIA--PD 372
             KG      +YN+++R L K+ +  +A RL  +M ++++   PD
Sbjct: 662 IEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPD 706


>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 118/376 (31%), Positives = 197/376 (52%), Gaps = 8/376 (2%)

Query: 149 GLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIH 208
            L  F  M      P L +   LL+ LAK +    V+ +Y +M   G+ ++    N+L++
Sbjct: 53  ALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLN 112

Query: 209 ACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISP 268
             C  + + +       +  +    ++ TYNTLI   C +    EA  +  RM++ G +P
Sbjct: 113 CLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTP 172

Query: 269 DIVTYNSLIHGFCREGRMREARRLFRDIKG--------ATPNHVTYTTLIDGYCRANDLE 320
           D+VTY +LI G C  G +  A +L +++            PN +TY  ++DG C+    +
Sbjct: 173 DVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGRED 232

Query: 321 EALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLI 380
           EA +L E M  +G+ P +++YNS++   C  G+  ++ RLL+EM ++ + PD VT N LI
Sbjct: 233 EAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLI 292

Query: 381 NAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFS 440
           +  CK G    A K+   M+E+G++ D  TY +LI GFC   +++ A+EL   M   G  
Sbjct: 293 DTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCE 352

Query: 441 PSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRL 500
           P   SY+ L++GY      E  +KL +E +  G   +V  Y +L++      KVD A++L
Sbjct: 353 PDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKL 412

Query: 501 FNLMQGNGILGDSVIY 516
           F++M+ +GI  +S  Y
Sbjct: 413 FSVMKAHGIAENSYTY 428



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 135/511 (26%), Positives = 227/511 (44%), Gaps = 29/511 (5%)

Query: 63  FFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKI 122
           FF     + P    SL S   ++  L K KH+    ++  ++ L    S    LN L+  
Sbjct: 56  FFHLMMRSTPT--PSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNC 113

Query: 123 HDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTD 182
                              N+   ++G   F  +      P++     L+  L  +    
Sbjct: 114 -----------------LCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRIS 156

Query: 183 MVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDV-------RADL 235
              +++ +M +LG   ++  Y  LI   C + +++   KL  EM   D+       + ++
Sbjct: 157 EATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEM-LNDISRYEINCKPNV 215

Query: 236 FTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD 295
            TYN ++   CK G   EA  + + M+ +G+ P I++YNSLIHGFC  G+  E++RL  +
Sbjct: 216 ITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDE 275

Query: 296 I--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGR 353
           +  +G  P+ VT+  LID  C+   + EA +L  VM   G+ P +VTYNS++   C  G 
Sbjct: 276 MLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGD 335

Query: 354 IRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKA 413
           +  A  L   M  K   PD ++ N LIN Y K      AMK+ N ML  G   +  TY +
Sbjct: 336 LNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDS 395

Query: 414 LIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
           L+ G   A ++D AK+L   M   G + +  +Y   +DG C  +     +KL  E  S  
Sbjct: 396 LLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSN 455

Query: 474 LCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACS 533
             +++     LI   CK  K++ A  LF  +   G   + V YT + + + R G+    +
Sbjct: 456 FKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKAN 515

Query: 534 DILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
            ++  M        +  Y +    + + N++
Sbjct: 516 VLIQKMEANGCTPDIITYNTLMRGFYESNKL 546



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 136/511 (26%), Positives = 246/511 (48%), Gaps = 17/511 (3%)

Query: 9   SDTKFIKTISAIMLKGHWAKLLNPNIASSLTSTAIHKVLLN-LYNC-CHIPSLSCAFFKW 66
           S + F   +S +    H++++ +      L+  +  +  LN L NC C++  L   F  +
Sbjct: 68  SLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAF 127

Query: 67  AESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHD-D 125
           A      Y  ++ ++ T+I  L        A  +   + ++    TP V+     I    
Sbjct: 128 AGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLF--LRMQKLGCTPDVVTYGTLIKGLC 185

Query: 126 PDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVW 185
             GN ++          LK+ Q+ L    +  + N  P++    ++++ L K    D   
Sbjct: 186 GTGNINIA---------LKLHQEMLNDISRYEI-NCKPNVITYNIIVDGLCKVGREDEAK 235

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
           +++++M   G++ +I  YN LIH  C +   ++ ++LL EM  + ++ D+ T+N LI   
Sbjct: 236 QLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTL 295

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNH 303
           CK+G   EA  +   M   GI PD+VTYNSLI GFC  G +  AR LF  +  KG  P+ 
Sbjct: 296 CKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDV 355

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
           ++Y  LI+GY +   +EEA++L   M   G  P V+TY+S+L+ +   G++ DA +L + 
Sbjct: 356 ISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSV 415

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
           M    IA ++ T    ++  CK      AMK+   +  +   L+      LI G CKA +
Sbjct: 416 MKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGK 475

Query: 424 MDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRA 483
           ++ A EL   + + G  P+  +Y+ ++ G+C +   +    L+ +  + G   D+  Y  
Sbjct: 476 LETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNT 535

Query: 484 LIRRFCKKEKVDYAQRLFNLMQGNGILGDSV 514
           L+R F +  K++   +L + M    +  D++
Sbjct: 536 LMRGFYESNKLEEVVQLLHRMAQKDVSPDAI 566



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 115/447 (25%), Positives = 214/447 (47%), Gaps = 12/447 (2%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMV------QLGVVANIH 201
           +  ++F +M+     P +     L+  L      ++  K++++M+      ++    N+ 
Sbjct: 157 EATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVI 216

Query: 202 LYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRM 261
            YN+++   CK    D+ ++L  EM+ + +   + +YN+LI  +C  G   E+  + D M
Sbjct: 217 TYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEM 276

Query: 262 EREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDL 319
             +G+ PD+VT+N LI   C+EG++ EA++L   +   G  P+ VTY +LI+G+C   DL
Sbjct: 277 LDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDL 336

Query: 320 EEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTL 379
             A  L   M +KG  P V++YN ++    K  ++ +A +L NEM      P+ +T ++L
Sbjct: 337 NSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSL 396

Query: 380 INAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGF 439
           +      G    A K+ + M   G+  + +TY   + G CK   +  A +L   +  + F
Sbjct: 397 LKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNF 456

Query: 440 SPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQR 499
                + + L+DG C     E   +L ++  + G   +V  Y  +I  FC++ +VD A  
Sbjct: 457 KLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANV 516

Query: 500 LFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL---MITLKIYRSFSA 556
           L   M+ NG   D + Y +L   ++ + + +    +L  M ++ +    IT  I     +
Sbjct: 517 LIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLS 576

Query: 557 SYAKDNEILDLFWSHVVDRGLMSKHIF 583
              K  E L L     + +G+  KH+ 
Sbjct: 577 KDEKYQECLHLLPRFPIQKGV-DKHLL 602



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/262 (23%), Positives = 108/262 (41%), Gaps = 8/262 (3%)

Query: 313 YCRANDLE--EALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIA 370
           +C+  ++    AL    +M      P + ++N +L  L K         L N+M    ++
Sbjct: 42  HCKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLS 101

Query: 371 PDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL 430
            D  T N L+N  C +            +L  G   +  TY  LI G C    +  A  L
Sbjct: 102 SDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRL 161

Query: 431 LFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEF---VSR---GLCVDVSVYRAL 484
              M   G +P   +Y  L+ G C   N    LKL  E    +SR       +V  Y  +
Sbjct: 162 FLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNII 221

Query: 485 IRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL 544
           +   CK  + D A++LF  M+  G++   + Y SL + +  AG+ +    +LD+M  + L
Sbjct: 222 VDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGL 281

Query: 545 MITLKIYRSFSASYAKDNEILD 566
              +  +     +  K+ ++++
Sbjct: 282 QPDMVTFNVLIDTLCKEGKVIE 303


>gi|414865374|tpg|DAA43931.1| TPA: hypothetical protein ZEAMMB73_168023 [Zea mays]
          Length = 793

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 129/430 (30%), Positives = 204/430 (47%), Gaps = 41/430 (9%)

Query: 140 YANLKMTQDGLQVFDQMRVHN-LMPHLHACTVLLNSLAKDRLT--DMVWKVYKKMVQLGV 196
           YA L++     Q+    R    + P L A   +L++LA+   T        +  ++ L +
Sbjct: 146 YARLRLPHLAAQLLHSFRRRGCVRPSLQAANAVLSALARSPSTSPQASLDAFHSLIALRL 205

Query: 197 VANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALA 256
             N + +N+L+H  C    +      L +M+   +  D  TYNTL+  +C+KGM  EA  
Sbjct: 206 HPNHYTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEART 265

Query: 257 VQDRMEREGI-----------------------------------SPDIVTYNSLIHGFC 281
           +  RM++EGI                                    PD+ TYN L  G C
Sbjct: 266 LLARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLC 325

Query: 282 REGRMREARRLFRDIKG---ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGV 338
           + G++ EA +L  +++     +P+ VTY TL+D   +     +AL L E M  KGV   +
Sbjct: 326 QAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSL 385

Query: 339 VTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNR 398
           VT+N I++ LC+EG++ +A   L  M E+ + PD +T NTLI+A CK G+ A A  + + 
Sbjct: 386 VTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDE 445

Query: 399 MLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNN 458
           M+ +GL +D FT   L++  CK K  + A+ELL      GF P   SY  ++  Y  +  
Sbjct: 446 MVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYK 505

Query: 459 EEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTS 518
            E  L L DE + R L   +S Y  LI+      K+  A    N +   G++ D   Y  
Sbjct: 506 PEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNI 565

Query: 519 LAYAYWRAGE 528
           + +AY + G+
Sbjct: 566 IIHAYCKEGD 575



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 125/395 (31%), Positives = 191/395 (48%), Gaps = 3/395 (0%)

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           LV  YA L   +    V + M      P L    VL   L +    D  +K+  +M QLG
Sbjct: 285 LVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLG 344

Query: 196 VVA-NIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEA 254
           +V+ ++  YN L+ AC K         LL EM  K V++ L T+N ++   C++G   EA
Sbjct: 345 IVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEA 404

Query: 255 LAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDG 312
           L   + M  EG++PD++TYN+LI   C+ G + +A  L  ++   G   +  T  TL+  
Sbjct: 405 LGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYN 464

Query: 313 YCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPD 372
            C+    EEA  L      +G  P  V+Y +++    KE +   A  L +EM ++K+ P 
Sbjct: 465 LCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPS 524

Query: 373 NVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLF 432
             T NTLI     +G    A+   N ++E GL+ D  TY  +IH +CK  +++ A +   
Sbjct: 525 ISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHN 584

Query: 433 GMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKE 492
            M++  F P   + + L++G C     E  +KL + +V +G  VDV  Y  LI+  CK  
Sbjct: 585 KMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDN 644

Query: 493 KVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
            VD A R F  M+  G+  D   Y  L  A   AG
Sbjct: 645 DVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAG 679



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 126/492 (25%), Positives = 221/492 (44%), Gaps = 10/492 (2%)

Query: 94  FKSAQNMLEKIALRDFLSTPSVLNA---LVKIHDDPDGNSHVLSWLVIFYANLKMTQDGL 150
            ++A  +L  +A     S  + L+A   L+ +   P  N +  + LV  + +     D L
Sbjct: 172 LQAANAVLSALARSPSTSPQASLDAFHSLIALRLHP--NHYTFNLLVHTHCSKGTLADAL 229

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
               +M+   L P       LLN+  +  +      +  +M + G+V     YN L+ A 
Sbjct: 230 STLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLARMKKEGIVPTRATYNTLVSAY 289

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI-SPD 269
            +   + +   ++  M       DL+TYN L A  C+ G   EA  ++D ME+ GI SPD
Sbjct: 290 ARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSPD 349

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLRE 327
           +VTYN+L+    +  R  +A  L  ++  KG   + VT+  ++ G CR   LEEAL   E
Sbjct: 350 VVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLE 409

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
           +M  +G+ P V+TYN+++   CK G +  A  L++EM    +  D  T NTL+   CK  
Sbjct: 410 MMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEK 469

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
               A ++     + G + D+ +Y  ++  + K  + + A  L   M+    +PS  +Y+
Sbjct: 470 RYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYN 529

Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGN 507
            L+ G          +  L+E +  GL  D + Y  +I  +CK+  ++ A +  N M  N
Sbjct: 530 TLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVEN 589

Query: 508 GILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDL 567
               D V   +L       G  +    + +    +   + +  Y +   +  KDN++   
Sbjct: 590 SFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTA 649

Query: 568 --FWSHVVDRGL 577
             F++ +  RGL
Sbjct: 650 LRFFADMEVRGL 661



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 111/421 (26%), Positives = 178/421 (42%), Gaps = 73/421 (17%)

Query: 146 TQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNV 205
           + D L + ++MR   +   L    +++  L ++   +      + M + G+  ++  YN 
Sbjct: 366 SSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNT 425

Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEA----------- 254
           LI A CK+ +V K   L+ EM    ++ D FT NTL+   CK+  + EA           
Sbjct: 426 LIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRG 485

Query: 255 ------------------------LAVQDRMEREGISPDIVTYNSLIHGFCREGRMREAR 290
                                   L + D M +  ++P I TYN+LI G    G++ EA 
Sbjct: 486 FVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAI 545

Query: 291 RLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
               ++   G  P+  TY  +I  YC+  DLE+A +    M      P VVT N+++  L
Sbjct: 546 DKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGL 605

Query: 349 CKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ 408
           C  GR+  A +L     EK    D +T NTLI A CK  D  +A++    M   GL  D 
Sbjct: 606 CLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDV 665

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAG------FSPSYCSYSWLVD----------- 451
           FTY  L+    +A     A+++L  + ++G      F PS  S    V+           
Sbjct: 666 FTYNVLLSALSEAGRSVEAQKMLHKLNESGKLYGRFFYPSIKSSVEAVETGKDPEVKSDI 725

Query: 452 ---GYCNKNNEEALLK----------------LLDEFVSRGLCVDVSVYRALIRRFCKKE 492
              G    +++E+  K                +LDE + +G+ VD S Y  L+    K++
Sbjct: 726 ESVGNTQGDDQESYNKYIKELCIGGQLKEAKAVLDEMMQKGMSVDNSTYITLMEGLIKRQ 785

Query: 493 K 493
           K
Sbjct: 786 K 786



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 81/342 (23%), Positives = 154/342 (45%), Gaps = 57/342 (16%)

Query: 83  TMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYAN 142
           T+++ L K K ++ A+ +L     R F+               PD  S+  + +  ++  
Sbjct: 460 TLLYNLCKEKRYEEAEELLRAPPQRGFV---------------PDEVSYG-TVMAAYFKE 503

Query: 143 LKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAK-DRLTDMVWKVYKKMVQLGVVANIH 201
            K  +  L ++D+M    L P +     L+  L+   +LT+ + K+  +++++G+V +  
Sbjct: 504 YK-PEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKL-NELMEMGLVPDDT 561

Query: 202 LYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRM 261
            YN++IHA CK  D++K  +   +M     + D+ T NTL+   C  G   +A+ + +  
Sbjct: 562 TYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESW 621

Query: 262 EREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDL 319
             +G   D++TYN+LI   C++  +  A R F D  ++G  P+  TY  L+     A   
Sbjct: 622 VEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGRS 681

Query: 320 EEALRLREVMAAKG------VYPGV------------------------------VTYNS 343
            EA ++   +   G       YP +                               +YN 
Sbjct: 682 VEAQKMLHKLNESGKLYGRFFYPSIKSSVEAVETGKDPEVKSDIESVGNTQGDDQESYNK 741

Query: 344 ILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
            +++LC  G++++A  +L+EM +K ++ DN T  TL+    K
Sbjct: 742 YIKELCIGGQLKEAKAVLDEMMQKGMSVDNSTYITLMEGLIK 783


>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
 gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
          Length = 775

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 118/380 (31%), Positives = 190/380 (50%), Gaps = 11/380 (2%)

Query: 171 LLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKD 230
           L+  L ++R T+  W ++ +M++LG V      N L+    +  + +++ +L+ +M   D
Sbjct: 276 LITRLCRNRKTNRGWDLFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNELMEKMVEMD 335

Query: 231 VRADLFTYNTLIALYCKKGMHYEALAVQDRM----EREGIS----PDIVTYNSLIHGFCR 282
           ++ ++ T+  LI   CK     +AL V ++M    E  GIS    PD+V YN+LI G C+
Sbjct: 336 IQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCK 395

Query: 283 EGRMREARRLF---RDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVV 339
            GR +E   L    R  KG  P+ +TY  LIDG+C+A ++E+   L + M  +GV P VV
Sbjct: 396 VGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVV 455

Query: 340 TYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRM 399
           T N+++  +C+ GR+  A     E   + +  D VT   LINA+C + +   AM++ N M
Sbjct: 456 TVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEM 515

Query: 400 LEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNE 459
           L++G   D   Y  LI GF +A  M  A  +L  +   G  P    Y+ L+ G+C  N  
Sbjct: 516 LKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKF 575

Query: 460 EALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
             + ++L E    GL  D   Y  LI    K   + +AQ++   M   G++     Y ++
Sbjct: 576 HRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAV 635

Query: 520 AYAYWRAGEPKACSDILDDM 539
             AY   G      +I  DM
Sbjct: 636 INAYCLNGNGNEAMEIFKDM 655



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 119/423 (28%), Positives = 196/423 (46%), Gaps = 47/423 (11%)

Query: 144 KMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLY 203
           + T  G  +F +M     +    AC  LL  LA++   + + ++ +KMV++ +  N+  +
Sbjct: 284 RKTNRGWDLFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNELMEKMVEMDIQPNVVTF 343

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFK--------DVRADLFTYNTLIALYCKKGMHYEAL 255
            +LI+  CK   VD   ++L +M            V  D+  YNTLI   CK G   E L
Sbjct: 344 GILINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGL 403

Query: 256 AVQDRM-EREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPN---------- 302
            + +RM  ++G +PD +TYN LI GFC+ G + + + LF ++  +G  PN          
Sbjct: 404 GLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGG 463

Query: 303 -------------------------HVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPG 337
                                     VTYT LI+ +C  N+ E+A+ L   M   G  P 
Sbjct: 464 MCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPD 523

Query: 338 VVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKN 397
            + Y +++    + GR+ DA+ +L E+ +  I PD V  NTLI  +C+        ++  
Sbjct: 524 AIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLK 583

Query: 398 RMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYC-NK 456
            M EAGL  D  TY  LI    K  ++  A++++  M+ AG  P+  +Y  +++ YC N 
Sbjct: 584 EMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNG 643

Query: 457 NNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIY 516
           N  EA+    D   +  +  +  +Y  LI   CK  KV  A  L   M+  G+  ++  Y
Sbjct: 644 NGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTY 703

Query: 517 TSL 519
            ++
Sbjct: 704 NAI 706



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 81/308 (26%), Positives = 144/308 (46%), Gaps = 3/308 (0%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           + G ++FD+M    + P++     L+  + +          + +  + G+  +   Y  L
Sbjct: 436 EKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTAL 495

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           I+A C  ++ +K  +L  EM       D   Y TLI+ + + G   +A  V   +++ GI
Sbjct: 496 INAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGI 555

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALR 324
            PD V YN+LI GFCR  +      + ++++  G  P+ +TY TLI    +  DL+ A +
Sbjct: 556 RPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQK 615

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMN-EKKIAPDNVTCNTLINAY 383
           +   M   GV P V TY +++   C  G   +A  +  +M    K+ P+ V  N LIN+ 
Sbjct: 616 VMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSL 675

Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY 443
           CK     SA+ +   M   G+  +  TY A+  G    K+++   E +  M++   +P Y
Sbjct: 676 CKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVFEFMDRMIEHACNPDY 735

Query: 444 CSYSWLVD 451
            +   L +
Sbjct: 736 ITMEILTE 743



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 105/393 (26%), Positives = 168/393 (42%), Gaps = 21/393 (5%)

Query: 197 VANIHLYNVLIHACCKSSDVDKVEKLLCEM----EFKDVRADLFTYNTLIALYCKKGMHY 252
           V N +L NV +    +S  V    K++ EM    +  + R +  T + L +   K+  + 
Sbjct: 187 VKNTYLRNVWLSILLRSGRVKDALKVIDEMFESNDDSNCRPNDATGDILFSFLLKRERNE 246

Query: 253 EALAVQD------RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD-IK-GATPNHV 304
           E L+  +      +    G+         LI   CR  +      LF + IK GA     
Sbjct: 247 ELLSEDEIVNLVLKFGEHGVLISSFWMGRLITRLCRNRKTNRGWDLFTEMIKLGAVLESA 306

Query: 305 TYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM 364
              +L+ G  R  +      L E M    + P VVT+  ++  +CK  R+ DA  +L +M
Sbjct: 307 ACNSLLTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKM 366

Query: 365 NEKK--------IAPDNVTCNTLINAYCKIGDTASAMKVKNRML-EAGLMLDQFTYKALI 415
           +  K        + PD V  NTLI+  CK+G     + +  RM  + G   D  TY  LI
Sbjct: 367 SGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLI 426

Query: 416 HGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLC 475
            GFCKA E++  KEL   M   G +P+  + + LV G C      + +    E   RG+ 
Sbjct: 427 DGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMK 486

Query: 476 VDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDI 535
            D   Y ALI  FC     + A  LFN M  +G   D+++Y +L   + +AG     S +
Sbjct: 487 GDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFV 546

Query: 536 LDDMYRRRLMITLKIYRSFSASYAKDNEILDLF 568
           L ++ +  +      Y +    + + N+   +F
Sbjct: 547 LAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVF 579



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 66/268 (24%), Positives = 124/268 (46%), Gaps = 3/268 (1%)

Query: 169 TVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEF 228
           T L+N+       +   +++ +M++ G   +  +Y  LI    ++  +     +L E++ 
Sbjct: 493 TALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKK 552

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
             +R D   YNTLI  +C+    +    +   ME  G+ PD +TYN+LI    + G ++ 
Sbjct: 553 LGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKF 612

Query: 289 ARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL-REVMAAKGVYPGVVTYNSIL 345
           A+++ R +   G  P   TY  +I+ YC   +  EA+ + +++ AA  V P  V YN ++
Sbjct: 613 AQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILI 672

Query: 346 RKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLM 405
             LCK  +++ A  L+ +M    + P+  T N +        D     +  +RM+E    
Sbjct: 673 NSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVFEFMDRMIEHACN 732

Query: 406 LDQFTYKALIHGFCKAKEMDIAKELLFG 433
            D  T + L        E++  K+ + G
Sbjct: 733 PDYITMEILTEWLSAVGEIERLKKFVAG 760


>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
 gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
 gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
 gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
 gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 133/447 (29%), Positives = 216/447 (48%), Gaps = 15/447 (3%)

Query: 154 DQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKS 213
           +QM+   +   L+  ++ +N   +     +   V  KM++LG   +I   + L++  C S
Sbjct: 107 EQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHS 166

Query: 214 SDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTY 273
             +     L+ +M     + D FT+ TLI          EA+A+ D+M + G  PD+VTY
Sbjct: 167 KRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTY 226

Query: 274 NSLIHGFCREGRMREARRLFRDIKGA--TPNHVTYTTLIDGYCRANDLEEALRLREVMAA 331
            ++++G C+ G +  A  L   ++ A    N V + T+ID  C+   +E A+ L   M  
Sbjct: 227 GTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMET 286

Query: 332 KGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTAS 391
           KG+ P VVTYNS++  LC  GR  DA+RLL+ M EKKI P+ VT N LI+A+ K G    
Sbjct: 287 KGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVE 346

Query: 392 AMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVD 451
           A K+   M++  +  D  TY  LI+GFC    +D AK++   M+     P+  +Y+ L++
Sbjct: 347 AEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLIN 406

Query: 452 GYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILG 511
           G+C     E  ++L  E   RGL  +   Y  +I+ F +    D AQ +F  M  N +  
Sbjct: 407 GFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPT 466

Query: 512 DSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASY---AKDNEILDLF 568
           D + Y+ L +     G+      I   + +  + + + IY +         K  E  DLF
Sbjct: 467 DIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLF 526

Query: 569 WS----------HVVDRGLMSKHIFKE 585
            S          + +  GL SK + +E
Sbjct: 527 CSLSIKPDVVTYNTMISGLCSKRLLQE 553



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 109/400 (27%), Positives = 186/400 (46%), Gaps = 34/400 (8%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           + + + DQM      P L     ++N L K    D+   +  KM    + AN+ ++N +I
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTII 265

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
            + CK   V+    L  EME K +R ++ TYN+LI   C  G   +A  +   M  + I+
Sbjct: 266 DSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKIN 325

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
           P++VT+N+LI  F +EG++ EA +L  ++  +   P+ +TY  LI+G+C  N L+EA ++
Sbjct: 326 PNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQM 385

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
            + M +K   P + TYN+++   CK  R+ D   L  EM+++ +  + VT  T+I  + +
Sbjct: 386 FKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQ 445

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIA------------------ 427
            GD  SA  V  +M+   +  D  TY  L+HG C   ++D A                  
Sbjct: 446 AGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFI 505

Query: 428 -KELLFGMLDAG-------------FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
              ++ GM  AG               P   +Y+ ++ G C+K   +    L  +    G
Sbjct: 506 YNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDG 565

Query: 474 LCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDS 513
              +   Y  LIR   +      +  L   M+ +G +GD+
Sbjct: 566 TLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDA 605



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 118/472 (25%), Positives = 204/472 (43%), Gaps = 61/472 (12%)

Query: 47  LLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIAL 106
           LLN Y  CH   +S A     +     YK    +  T+IH L  +     A  +++++  
Sbjct: 159 LLNGY--CHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQ 216

Query: 107 R----DFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLM 162
           R    D ++  +V+N L K  D                         L + ++M    + 
Sbjct: 217 RGCQPDLVTYGTVVNGLCKRGD---------------------IDLALNLLNKMEAARIK 255

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
            ++     +++SL K R  ++   ++ +M   G+  N+  YN LI+  C         +L
Sbjct: 256 ANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRL 315

Query: 223 LCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR 282
           L  M  K +  ++ T+N LI  + K+G   EA  + + M +  I PD +TYN LI+GFC 
Sbjct: 316 LSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCM 375

Query: 283 EGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVT 340
             R+ EA+++F+ +  K   PN  TY TLI+G+C+   +E+ + L   M+ +G+    VT
Sbjct: 376 HNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVT 435

Query: 341 YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG--DTA-------- 390
           Y +I++   + G    A  +  +M   ++  D +T + L++  C  G  DTA        
Sbjct: 436 YTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQ 495

Query: 391 -SAMK----VKNRMLEA-----------------GLMLDQFTYKALIHGFCKAKEMDIAK 428
            S M+    + N M+E                   +  D  TY  +I G C  + +  A 
Sbjct: 496 KSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEAD 555

Query: 429 ELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSV 480
           +L   M + G  P+  +Y+ L+       +  A  +L+ E  S G   D S 
Sbjct: 556 DLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDAST 607



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 70/284 (24%), Positives = 135/284 (47%), Gaps = 2/284 (0%)

Query: 285 RMREARRLFRDIKGATP--NHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYN 342
           ++ +A  LF D+  + P  + V +  L+    + N  E  + L E M   G+   + TY+
Sbjct: 63  KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122

Query: 343 SILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEA 402
             +   C+  ++  A  +L +M +    PD VT ++L+N YC     + A+ + ++M+E 
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182

Query: 403 GLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEAL 462
           G   D FT+  LIHG     +   A  L+  M+  G  P   +Y  +V+G C + + +  
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242

Query: 463 LKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYA 522
           L LL++  +  +  +V ++  +I   CK   V+ A  LF  M+  GI  + V Y SL   
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINC 302

Query: 523 YWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
               G     S +L +M  +++   +  + +   ++ K+ ++++
Sbjct: 303 LCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVE 346



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 65/236 (27%), Positives = 111/236 (47%), Gaps = 11/236 (4%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           Q+F  M   + +P++     L+N   K +  +   +++++M Q G+V N   Y  +I   
Sbjct: 384 QMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGF 443

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
            ++ D D  + +  +M    V  D+ TY+ L+   C  G    AL +   +++  +  +I
Sbjct: 444 FQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNI 503

Query: 271 VTYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMA 330
             YN++I G C+ G++ EA  LF  +    P+ VTY T+I G C    L+EA  L   M 
Sbjct: 504 FIYNTMIEGMCKAGKVGEAWDLFCSLS-IKPDVVTYNTMISGLCSKRLLQEADDLFRKMK 562

Query: 331 AKGVYPGVVTYNSILRKLCKEGRIRDANR-----LLNEMNEKKIAPDNVTCNTLIN 381
             G  P   TYN+++R       +RD +R     L+ EM       D  T + + N
Sbjct: 563 EDGTLPNSGTYNTLIR-----ANLRDCDRAASAELIKEMRSSGFVGDASTISLVTN 613



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/228 (28%), Positives = 110/228 (48%), Gaps = 6/228 (2%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N    + L+  +   K  +DG+++F +M    L+ +    T ++    +    D    V+
Sbjct: 397 NIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVF 456

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
           K+MV   V  +I  Y++L+H  C    +D    +   ++  ++  ++F YNT+I   CK 
Sbjct: 457 KQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKA 516

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTY 306
           G   EA    D      I PD+VTYN++I G C +  ++EA  LFR +K  G  PN  TY
Sbjct: 517 GKVGEAW---DLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTY 573

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRI 354
            TLI    R  D   +  L + M + G + G  +  S++  +  +GR+
Sbjct: 574 NTLIRANLRDCDRAASAELIKEMRSSG-FVGDASTISLVTNMLHDGRL 620



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 58/232 (25%), Positives = 102/232 (43%), Gaps = 4/232 (1%)

Query: 341 YNSILR-KLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRM 399
           Y  ILR +L    ++ DA  L  +M + +  P  V  N L++A  K+      + +  +M
Sbjct: 50  YREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQM 109

Query: 400 LEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNE 459
              G+  D +TY   I+ FC+  ++ +A  +L  M+  G+ P   + S L++GYC+    
Sbjct: 110 QTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRI 169

Query: 460 EALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
              + L+D+ V  G   D   +  LI       K   A  L + M   G   D V Y ++
Sbjct: 170 SDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTV 229

Query: 520 AYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI---LDLF 568
                + G+     ++L+ M   R+   + I+ +   S  K   +   +DLF
Sbjct: 230 VNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLF 281


>gi|357127090|ref|XP_003565218.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Brachypodium distachyon]
          Length = 886

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 117/397 (29%), Positives = 204/397 (51%), Gaps = 2/397 (0%)

Query: 160 NLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKV 219
            + P  H  + +L SL K R   +   ++  M+  GV+ + ++Y   I A C+  ++D  
Sbjct: 157 GIAPDQHTASQILFSLVKIRQFALARHLFDGMLHSGVLLDEYVYTAGIRAYCEVRNLDGA 216

Query: 220 EKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHG 279
           + L+  M+ +  +     YN LI   CK     EA+ V++ M   G++ D VT  +L++G
Sbjct: 217 KGLVARMQDEGDKVSAVPYNVLIYGLCKNQRVREAVDVKNSMLARGVAADEVTCRTLVYG 276

Query: 280 FCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPG 337
           FCR   +  A  +  D+   G  P+    + ++DG  +   +EEA RL   +    + P 
Sbjct: 277 FCRTEELDMALEMTGDMARLGFVPSEANCSFMLDGLRKKGRVEEAFRLACQLGELRMVPN 336

Query: 338 VVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKN 397
           +  YN++L  +CK G   +A+RL+NEM++K + P+ VT   LI++ CK G    A+ + +
Sbjct: 337 IFAYNALLNNMCKNGMFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDDALCMLD 396

Query: 398 RMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKN 457
           RM E G+ +  + Y +LI+  CK  ++D+A   L  M++ G +P+  SYS ++ G C K 
Sbjct: 397 RMREKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIGLTPNAASYSPVIAGLCRKG 456

Query: 458 NEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYT 517
           +    ++L  +   +G+  +   + ALI  FCK +K+D A RLFN M  + +  + V + 
Sbjct: 457 DLSGAVELHRKMAEKGVAWNTYTFTALINGFCKAKKMDEASRLFNKMTESNLEPNEVTFN 516

Query: 518 SLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSF 554
           ++   Y   G+ +    + D M  R L      YRS 
Sbjct: 517 AVIEGYCLVGDIRKAFQLYDQMMCRGLTPDNYTYRSL 553



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 130/517 (25%), Positives = 212/517 (41%), Gaps = 108/517 (20%)

Query: 145 MTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYN 204
           M  +  ++ ++M    L P+     +L++SL K  + D    +  +M + GV   ++ YN
Sbjct: 352 MFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDDALCMLDRMREKGVRMTVYPYN 411

Query: 205 VLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMERE 264
            LI+ CCK  D+D     L EM    +  +  +Y+ +IA  C+KG    A+ +  +M  +
Sbjct: 412 SLINCCCKKDDLDMAMGFLSEMVEIGLTPNAASYSPVIAGLCRKGDLSGAVELHRKMAEK 471

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIKGAT--PNHVTYTTLIDGYCRANDLEEA 322
           G++ +  T+ +LI+GFC+  +M EA RLF  +  +   PN VT+  +I+GYC   D+ +A
Sbjct: 472 GVAWNTYTFTALINGFCKAKKMDEASRLFNKMTESNLEPNEVTFNAVIEGYCLVGDIRKA 531

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKL---------------------------------- 348
            +L + M  +G+ P   TY S++  L                                  
Sbjct: 532 FQLYDQMMCRGLTPDNYTYRSLISGLCLTDGASKAKEFVADLENNCSVLNKFSLTALLHG 591

Query: 349 -CKEGRIRDANRLLN-----------------------------------EMNEKKIAPD 372
            C+EGR+ +A  + N                                   EM EK + PD
Sbjct: 592 FCREGRLTEAYHVWNEMAMWGGKLDLISFTIIVYAALKQHDSEKSCVLFREMKEKGVRPD 651

Query: 373 NVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKA----------K 422
           NV    +IN Y K G+   A+   + M+  G + +  TY AL++  CK+          K
Sbjct: 652 NVFHTCMINMYSKEGNMVQALNCWDEMIADGHLPNTVTYTALVNNLCKSWHLSSAELLCK 711

Query: 423 EM-------------------------DIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKN 457
           EM                         + AK+L F ML  GF  +  S + L+ G+C   
Sbjct: 712 EMLASHFLPNSYTFNCFLDYFATEGNLETAKDLYFAMLQ-GFLANIVSVNTLIKGFCKVG 770

Query: 458 NEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYT 517
             +  + L+      G   D   Y  +I   CKK  ++ A  L+N M   G+  D V Y 
Sbjct: 771 QIQEAIDLISRSTENGFFPDCISYSTVIHELCKKGDINEAIELWNEMLYKGVKPDIVAYN 830

Query: 518 SLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSF 554
            L       GE   C  I  DM ++ +      +R+ 
Sbjct: 831 ILIRWCNIHGESDKCLGIYIDMVKKGVQPNWHTHRAL 867



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 123/487 (25%), Positives = 223/487 (45%), Gaps = 41/487 (8%)

Query: 138 IFYANLKMTQDGL--QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           I ++ +K+ Q  L   +FD M    ++   +  T  + +  + R  D    +  +M   G
Sbjct: 168 ILFSLVKIRQFALARHLFDGMLHSGVLLDEYVYTAGIRAYCEVRNLDGAKGLVARMQDEG 227

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYC--------- 246
              +   YNVLI+  CK+  V +   +   M  + V AD  T  TL+  +C         
Sbjct: 228 DKVSAVPYNVLIYGLCKNQRVREAVDVKNSMLARGVAADEVTCRTLVYGFCRTEELDMAL 287

Query: 247 --------------------------KKGMHYEALAVQDRMEREGISPDIVTYNSLIHGF 280
                                     KKG   EA  +  ++    + P+I  YN+L++  
Sbjct: 288 EMTGDMARLGFVPSEANCSFMLDGLRKKGRVEEAFRLACQLGELRMVPNIFAYNALLNNM 347

Query: 281 CREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGV 338
           C+ G   EA RL  ++  KG  PN VTY  LI   C+   +++AL + + M  KGV   V
Sbjct: 348 CKNGMFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDDALCMLDRMREKGVRMTV 407

Query: 339 VTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNR 398
             YNS++   CK+  +  A   L+EM E  + P+  + + +I   C+ GD + A+++  +
Sbjct: 408 YPYNSLINCCCKKDDLDMAMGFLSEMVEIGLTPNAASYSPVIAGLCRKGDLSGAVELHRK 467

Query: 399 MLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNN 458
           M E G+  + +T+ ALI+GFCKAK+MD A  L   M ++   P+  +++ +++GYC   +
Sbjct: 468 MAEKGVAWNTYTFTALINGFCKAKKMDEASRLFNKMTESNLEPNEVTFNAVIEGYCLVGD 527

Query: 459 EEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTS 518
                +L D+ + RGL  D   YR+LI   C  +    A+     ++ N  + +    T+
Sbjct: 528 IRKAFQLYDQMMCRGLTPDNYTYRSLISGLCLTDGASKAKEFVADLENNCSVLNKFSLTA 587

Query: 519 LAYAYWRAGEPKACSDILDD--MYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRG 576
           L + + R G       + ++  M+  +L +       ++A    D+E   + +  + ++G
Sbjct: 588 LLHGFCREGRLTEAYHVWNEMAMWGGKLDLISFTIIVYAALKQHDSEKSCVLFREMKEKG 647

Query: 577 LMSKHIF 583
           +   ++F
Sbjct: 648 VRPDNVF 654



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 80/287 (27%), Positives = 143/287 (49%), Gaps = 5/287 (1%)

Query: 169 TVLLNSLAKD-RLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEME 227
           T LL+   ++ RLT+  + V+ +M   G   ++  + ++++A  K  D +K   L  EM+
Sbjct: 586 TALLHGFCREGRLTE-AYHVWNEMAMWGGKLDLISFTIIVYAALKQHDSEKSCVLFREMK 644

Query: 228 FKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMR 287
            K VR D   +  +I +Y K+G   +AL   D M  +G  P+ VTY +L++  C+   + 
Sbjct: 645 EKGVRPDNVFHTCMINMYSKEGNMVQALNCWDEMIADGHLPNTVTYTALVNNLCKSWHLS 704

Query: 288 EARRLFRDIKGA--TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSIL 345
            A  L +++  +   PN  T+   +D +    +LE A  L   M  +G    +V+ N+++
Sbjct: 705 SAELLCKEMLASHFLPNSYTFNCFLDYFATEGNLETAKDLYFAML-QGFLANIVSVNTLI 763

Query: 346 RKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLM 405
           +  CK G+I++A  L++   E    PD ++ +T+I+  CK GD   A+++ N ML  G+ 
Sbjct: 764 KGFCKVGQIQEAIDLISRSTENGFFPDCISYSTVIHELCKKGDINEAIELWNEMLYKGVK 823

Query: 406 LDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
            D   Y  LI       E D    +   M+  G  P++ ++  L  G
Sbjct: 824 PDIVAYNILIRWCNIHGESDKCLGIYIDMVKKGVQPNWHTHRALFVG 870



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 85/318 (26%), Positives = 136/318 (42%), Gaps = 41/318 (12%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEA 322
           GI+PD  T + ++    +  +   AR LF  +   G   +   YT  I  YC   +L+ A
Sbjct: 157 GIAPDQHTASQILFSLVKIRQFALARHLFDGMLHSGVLLDEYVYTAGIRAYCEVRNLDGA 216

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
             L   M  +G     V YN ++  LCK  R+R+                          
Sbjct: 217 KGLVARMQDEGDKVSAVPYNVLIYGLCKNQRVRE-------------------------- 250

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
                    A+ VKN ML  G+  D+ T + L++GFC+ +E+D+A E+   M   GF PS
Sbjct: 251 ---------AVDVKNSMLARGVAADEVTCRTLVYGFCRTEELDMALEMTGDMARLGFVPS 301

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             + S+++DG   K   E   +L  +     +  ++  Y AL+   CK      A RL N
Sbjct: 302 EANCSFMLDGLRKKGRVEEAFRLACQLGELRMVPNIFAYNALLNNMCKNGMFSEADRLVN 361

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDN 562
            M   G+  + V Y  L ++  + G       +LD M  + + +T+  Y S      K +
Sbjct: 362 EMSDKGLEPNEVTYAILIHSLCKRGMMDDALCMLDRMREKGVRMTVYPYNSLINCCCKKD 421

Query: 563 EILDL---FWSHVVDRGL 577
           + LD+   F S +V+ GL
Sbjct: 422 D-LDMAMGFLSEMVEIGL 438


>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Vitis vinifera]
          Length = 686

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 123/371 (33%), Positives = 189/371 (50%), Gaps = 2/371 (0%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D L  F++M   +  P     T LL S+AK +    V  +  +M   G+  +++  N+LI
Sbjct: 133 DALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILI 192

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           ++ C    +     +L ++     + D  T+NTLI   C +G   EAL + D+   EG  
Sbjct: 193 NSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQ 252

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
           PD+VTY +L++G C+ G    A RL R +  K   PN + Y T+ID  C+   + EA  L
Sbjct: 253 PDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNL 312

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
              M  KG+ P + TYNS++  LC     +    LLNEM   KI P+ V  +T+++A CK
Sbjct: 313 FSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCK 372

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            G  A A  V + M++ G+  D  TY AL+ G C   EMD A ++   M+  G  P+  S
Sbjct: 373 EGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRS 432

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+ L++GYC     +  + LL++   +GL  D   Y  LI   C   ++ +A  LF+ M 
Sbjct: 433 YNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMV 492

Query: 506 GNGILGDSVIY 516
            +G + D V Y
Sbjct: 493 ASGQIPDLVTY 503



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 131/479 (27%), Positives = 222/479 (46%), Gaps = 20/479 (4%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           SVL  L+K+   PD  +   + L+          + L +FD+       P +     L+N
Sbjct: 206 SVLAKLLKLGCQPDNTT--FNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMN 263

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
            L K   T    ++ + MVQ     N+  YN +I + CK   V +   L  EM  K +  
Sbjct: 264 GLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISP 323

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           D+FTYN+LI   C          + + M    I P++V +++++   C+EG +  A  + 
Sbjct: 324 DIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVV 383

Query: 294 RDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
             +  +G  P+ VTYT L+DG+C  ++++EA+++ + M  KG  P V +YN ++   C+ 
Sbjct: 384 DMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQI 443

Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
            R+  A  LL +M+ + +  D VT NTLI+  C +G    A+ + + M+ +G + D  TY
Sbjct: 444 QRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTY 503

Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
           + L+   CK   +  A  LL  +  +        Y+  +DG C     EA   L     S
Sbjct: 504 RILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSS 563

Query: 472 RGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKA 531
           +GL  DV  Y  +I   CK+  +D A +LF  M  NG   D  IY ++   + R+ E   
Sbjct: 564 KGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRDGCIYNTIIRGFLRSNETFG 623

Query: 532 CSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKEMQLRN 590
            + +L +M          +   FSA  +    I+++     +D+       F+ ++LR 
Sbjct: 624 ATQLLQEM----------LAEGFSADVSTTTLIVEMLSDDGLDQS------FERLRLRG 666



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 139/516 (26%), Positives = 238/516 (46%), Gaps = 37/516 (7%)

Query: 9   SDTKFIKTISAIMLKGHWAKLLNPNIASSLTSTAIHK------VLLNLYNCCHIPSLSCA 62
           S   F K +++I    H++ +L+  +++ + S  I        +L+N +  CH+  L  A
Sbjct: 149 STVDFTKLLTSIAKMKHYSTVLS--LSTQMDSFGIPPDVYTLNILINSF--CHLRRLGYA 204

Query: 63  FFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDF----LSTPSVLNA 118
           F   A+      +    +  T+I  L        A ++ +K     F    ++  +++N 
Sbjct: 205 FSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNG 264

Query: 119 LVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKD 178
           L K+     GN                T   +++   M   N  P++ A   +++SL KD
Sbjct: 265 LCKV-----GN----------------TSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKD 303

Query: 179 RLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTY 238
           R     + ++ +M+  G+  +I  YN LIHA C   +   V  LL EM    +  ++  +
Sbjct: 304 RQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVF 363

Query: 239 NTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI-- 296
           +T++   CK+GM   A  V D M + G+ PD+VTY +L+ G C    M EA ++F  +  
Sbjct: 364 STVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVH 423

Query: 297 KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRD 356
           KG  PN  +Y  LI+GYC+   +++A+ L E M+ +G+    VTYN+++  LC  GR++ 
Sbjct: 424 KGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQH 483

Query: 357 ANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIH 416
           A  L +EM      PD VT   L++  CK    A AM +   +  + L  D   Y   I 
Sbjct: 484 AIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAID 543

Query: 417 GFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCV 476
           G C+A E++ A++L   +   G  P   +Y+ ++ G C +   +   KL  +    G   
Sbjct: 544 GMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENGCSR 603

Query: 477 DVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGD 512
           D  +Y  +IR F +  +   A +L   M   G   D
Sbjct: 604 DGCIYNTIIRGFLRSNETFGATQLLQEMLAEGFSAD 639



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 102/352 (28%), Positives = 177/352 (50%), Gaps = 2/352 (0%)

Query: 203 YNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRME 262
           +  L+ +  K      V  L  +M+   +  D++T N LI  +C       A +V  ++ 
Sbjct: 153 FTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLL 212

Query: 263 REGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLE 320
           + G  PD  T+N+LI G C EG++ EA  LF     +G  P+ VTY TL++G C+  +  
Sbjct: 213 KLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTS 272

Query: 321 EALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLI 380
            A+RL   M  K   P V+ YN+I+  LCK+ ++ +A  L +EM  K I+PD  T N+LI
Sbjct: 273 AAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLI 332

Query: 381 NAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFS 440
           +A C + +      + N M+ + +M +   +  ++   CK   + IA +++  M+  G  
Sbjct: 333 HALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVE 392

Query: 441 PSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRL 500
           P   +Y+ L+DG+C ++  +  +K+ D  V +G   +V  Y  LI  +C+ +++D A  L
Sbjct: 393 PDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGL 452

Query: 501 FNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYR 552
              M   G++ D+V Y +L +     G  +    +  +M     +  L  YR
Sbjct: 453 LEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYR 504



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 112/448 (25%), Positives = 207/448 (46%), Gaps = 25/448 (5%)

Query: 10  DTKFIKTISAIMLKGHWAK---LLNPNIASSLTSTAI-HKVLLNLYNCCHIPSLSCAFFK 65
           +T F   I  + ++G   +   L +  I        + +  L+N    C + + S A   
Sbjct: 220 NTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMN--GLCKVGNTSAAIRL 277

Query: 66  WAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDD 125
                  N + ++ ++ T+I  L K++    A N+  ++  +         N+L+     
Sbjct: 278 LRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLI----- 332

Query: 126 PDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVW 185
                H L        NL   +    + ++M    +MP++   + ++++L K+ +  +  
Sbjct: 333 -----HAL-------CNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAH 380

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
            V   M++ GV  ++  Y  L+   C  S++D+  K+   M  K    ++ +YN LI  Y
Sbjct: 381 DVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGY 440

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNH 303
           C+     +A+ + ++M  +G+  D VTYN+LIHG C  GR++ A  LF ++   G  P+ 
Sbjct: 441 CQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDL 500

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
           VTY  L+D  C+ + L EA+ L + +    +   ++ YN  +  +C+ G +  A  L + 
Sbjct: 501 VTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSN 560

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
           ++ K + PD  T N +I+  CK G    A K+  +M E G   D   Y  +I GF ++ E
Sbjct: 561 LSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRDGCIYNTIIRGFLRSNE 620

Query: 424 MDIAKELLFGMLDAGFSPSYCSYSWLVD 451
              A +LL  ML  GFS    + + +V+
Sbjct: 621 TFGATQLLQEMLAEGFSADVSTTTLIVE 648



 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 55/244 (22%), Positives = 93/244 (38%), Gaps = 35/244 (14%)

Query: 356 DANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALI 415
           DA    N M      P  V    L+ +  K+   ++ + +  +M   G+  D +T   LI
Sbjct: 133 DALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILI 192

Query: 416 HGFCKAKEMDIAKELLFGML-----------------------------------DAGFS 440
           + FC  + +  A  +L  +L                                     GF 
Sbjct: 193 NSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQ 252

Query: 441 PSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRL 500
           P   +Y  L++G C   N  A ++LL   V +    +V  Y  +I   CK  +V  A  L
Sbjct: 253 PDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNL 312

Query: 501 FNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAK 560
           F+ M   GI  D   Y SL +A     E K  + +L++M   ++M  + ++ +   +  K
Sbjct: 313 FSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCK 372

Query: 561 DNEI 564
           +  I
Sbjct: 373 EGMI 376



 Score = 44.3 bits (103), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 42/201 (20%), Positives = 81/201 (40%), Gaps = 17/201 (8%)

Query: 50  LYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDF 109
           ++  CH+  L  A   + E         L ++  ++  L KN H   A  +L+ I   + 
Sbjct: 472 IHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNL 531

Query: 110 LSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACT 169
            +   V N  +      DG              L+  +D   +F  +    L P +    
Sbjct: 532 DADILVYNIAI------DGMCRA--------GELEAARD---LFSNLSSKGLQPDVRTYN 574

Query: 170 VLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFK 229
           ++++ L K  L D   K+++KM + G   +  +YN +I    +S++     +LL EM  +
Sbjct: 575 IMIHGLCKRGLLDEANKLFRKMDENGCSRDGCIYNTIIRGFLRSNETFGATQLLQEMLAE 634

Query: 230 DVRADLFTYNTLIALYCKKGM 250
              AD+ T   ++ +    G+
Sbjct: 635 GFSADVSTTTLIVEMLSDDGL 655


>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 125/467 (26%), Positives = 219/467 (46%), Gaps = 42/467 (8%)

Query: 146 TQDGLQVFDQMR--VHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLY 203
           +Q+ L++   M     +  P + + T ++N   K+   D  +  Y +M+  G++ N+  Y
Sbjct: 178 SQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTY 237

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER 263
           + +I A CK+  +DK  ++L  M    V  +  TYN+++  YC  G   EA+    +M  
Sbjct: 238 SSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHS 297

Query: 264 EGISPDIVTYNSLIHGFCREGRMREARRLF-----RDIK--------------------- 297
           +G+ PD+VTYNSL+   C+ GR  EAR++F     R +K                     
Sbjct: 298 DGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVE 357

Query: 298 -----------GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILR 346
                      G  PNH  ++ LI  Y +   +++A+ +   M  +G+ P  VTY +++ 
Sbjct: 358 MHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIG 417

Query: 347 KLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLML 406
            LCK GR+ DA R   +M +++++P N+  N+LI++ C       A ++   ML+ G+ L
Sbjct: 418 ILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICL 477

Query: 407 DQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLL 466
           D   + ++I   CK   +  +++L   M+  G  P   +YS L+DGYC     +   KLL
Sbjct: 478 DTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLL 537

Query: 467 DEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRA 526
              VS G+  D   Y  LI  +CK  +++ A  LF  M+ +G+  D + Y  +    ++ 
Sbjct: 538 ASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQT 597

Query: 527 GEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDN---EILDLFWS 570
               A  ++   +      + L  Y        K+N   E L +F +
Sbjct: 598 RRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQN 644



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 122/440 (27%), Positives = 205/440 (46%), Gaps = 40/440 (9%)

Query: 167 ACTVLLNSLAKD-RLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCE 225
           A T +L  L  D R +D +  V ++M QLG + N+  YN+L+   C  +   +  +LL  
Sbjct: 128 AFTPMLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQM 187

Query: 226 M--EFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCRE 283
           M  +  D   D+ +Y T+I  + K+G   +A      M   GI P++VTY+S+I   C+ 
Sbjct: 188 MPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKA 247

Query: 284 GRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTY 341
             M +A  +   +   G  PN  TY +++ GYC +   +EA+   + M + GV P VVTY
Sbjct: 248 QAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTY 307

Query: 342 NSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN-------------------- 381
           NS++  LCK GR  +A ++ + M ++ + P+  T  TL+                     
Sbjct: 308 NSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVR 367

Query: 382 ---------------AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
                          AY K G    AM V ++M + GL  D  TY  +I   CK+  ++ 
Sbjct: 368 NGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVED 427

Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
           A      M+D   SP    Y+ L+   C  +  +   +L+ E + RG+C+D   + ++I 
Sbjct: 428 AMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIID 487

Query: 487 RFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMI 546
             CK+ +V  +++LF+LM   G+  D + Y++L   Y  AG+    + +L  M    +  
Sbjct: 488 SHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKP 547

Query: 547 TLKIYRSFSASYAKDNEILD 566
               Y +    Y K + + D
Sbjct: 548 DCVTYNTLINGYCKISRMED 567



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 105/373 (28%), Positives = 188/373 (50%), Gaps = 4/373 (1%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLA-KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           ++FD M    L P +     LL   A K  L +M   +   MV+ G+  N +++++LI A
Sbjct: 325 KMFDSMTKRGLKPEITTYGTLLQGYATKGALVEM-HGLLDLMVRNGIHPNHYVFSILICA 383

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
             K   VD+   +  +M  + +  D  TY T+I + CK G   +A+   ++M  E +SP 
Sbjct: 384 YAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPG 443

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLRE 327
            + YNSLIH  C   +  +A+ L  ++  +G   + + + ++ID +C+   + E+ +L +
Sbjct: 444 NIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFD 503

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
           +M   GV P ++TY++++   C  G++ +A +LL  M    + PD VT NTLIN YCKI 
Sbjct: 504 LMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKIS 563

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
               A+ +   M  +G+  D  TY  ++ G  + +    AKEL  G+ ++G      +Y+
Sbjct: 564 RMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYN 623

Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGN 507
            ++ G C  N  +  L++        L ++   +  +I    K  + D A+ LF  +  N
Sbjct: 624 IILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSAN 683

Query: 508 GILGDSVIYTSLA 520
           G++ D   Y+ +A
Sbjct: 684 GLVPDVRTYSLMA 696



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 123/461 (26%), Positives = 211/461 (45%), Gaps = 22/461 (4%)

Query: 57  PSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLE---KIALRDFLSTP 113
           P  +  F K   S     +  + ++ +++  L KN     A+ M +   K  L+  ++T 
Sbjct: 285 PKEAIGFLKKMHS--DGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTY 342

Query: 114 SVL-------NALVKIHDDPD--------GNSHVLSWLVIFYANLKMTQDGLQVFDQMRV 158
             L        ALV++H   D         N +V S L+  YA        + VF +MR 
Sbjct: 343 GTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQ 402

Query: 159 HNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDK 218
             L P       ++  L K    +   + +++M+   +     +YN LIH+ C     DK
Sbjct: 403 QGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDK 462

Query: 219 VEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIH 278
            ++L+ EM  + +  D   +N++I  +CK+G   E+  + D M R G+ PDI+TY++LI 
Sbjct: 463 AKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLID 522

Query: 279 GFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYP 336
           G+C  G+M EA +L   +   G  P+ VTY TLI+GYC+ + +E+AL L   M + GV P
Sbjct: 523 GYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSP 582

Query: 337 GVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVK 396
            ++TYN IL+ L +  R   A  L   + E     +  T N +++  CK   T  A+++ 
Sbjct: 583 DIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMF 642

Query: 397 NRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNK 456
             +    L L+  T+  +I    K    D AK+L   +   G  P   +YS + +    +
Sbjct: 643 QNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQ 702

Query: 457 NNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYA 497
              E L  L       G   +  +  +++R+  ++  +  A
Sbjct: 703 GLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRA 743



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 110/443 (24%), Positives = 204/443 (46%), Gaps = 20/443 (4%)

Query: 80  SHWTMIHILTK----NKHFKSAQNMLEKIALRDFLSTPSVLNALVK-------------- 121
           S+ T+I+   K    +K + +   ML++  L + ++  S++ AL K              
Sbjct: 201 SYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSM 260

Query: 122 IHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLT 181
           + +    N    + +V  Y +    ++ +    +M    + P +     L++ L K+   
Sbjct: 261 VKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRC 320

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
               K++  M + G+   I  Y  L+        + ++  LL  M    +  + + ++ L
Sbjct: 321 TEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSIL 380

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGA 299
           I  Y K+G   +A+ V  +M ++G++PD VTY ++I   C+ GR+ +A R F  +  +  
Sbjct: 381 ICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERL 440

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
           +P ++ Y +LI   C  +  ++A  L   M  +G+    + +NSI+   CKEGR+ ++ +
Sbjct: 441 SPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEK 500

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
           L + M    + PD +T +TLI+ YC  G    A K+   M+  G+  D  TY  LI+G+C
Sbjct: 501 LFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYC 560

Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
           K   M+ A  L   M  +G SP   +Y+ ++ G        A  +L       G  +++S
Sbjct: 561 KISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELS 620

Query: 480 VYRALIRRFCKKEKVDYAQRLFN 502
            Y  ++   CK    D A R+F 
Sbjct: 621 TYNIILHGLCKNNLTDEALRMFQ 643



 Score = 91.7 bits (226), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 78/327 (23%), Positives = 133/327 (40%), Gaps = 45/327 (13%)

Query: 251 HYEALAVQ--DRMEREG---ISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNH 303
           H  A AV   +RM R G   ++P++ TY  L+   C  GR+        ++  KG   + 
Sbjct: 67  HSPAAAVSRYNRMARAGADEVTPNLCTYGILMGSCCCAGRLDLGFAALGNVIKKGFIVDA 126

Query: 304 VTYTTLIDGYC---RANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRL 360
           + +T ++ G C   R +D  + +  R  M   G  P V +YN +L+ LC + R ++A  L
Sbjct: 127 IAFTPMLKGLCADKRTSDAMDIVLRR--MTQLGCIPNVFSYNILLKGLCDDNRSQEALEL 184

Query: 361 LNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCK 420
           L  M      PD+             GD                  D  +Y  +I+GF K
Sbjct: 185 LQMM------PDDG------------GDCPP---------------DVVSYTTVINGFFK 211

Query: 421 AKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSV 480
             ++D A      MLD G  P+  +YS ++   C     +  +++L   V  G+  +   
Sbjct: 212 EGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRT 271

Query: 481 YRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMY 540
           Y +++  +C   +   A      M  +G+  D V Y SL     + G       + D M 
Sbjct: 272 YNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMT 331

Query: 541 RRRLMITLKIYRSFSASYAKDNEILDL 567
           +R L   +  Y +    YA    ++++
Sbjct: 332 KRGLKPEITTYGTLLQGYATKGALVEM 358



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 71/268 (26%), Positives = 109/268 (40%), Gaps = 72/268 (26%)

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
           K++  MV++GV  +I  Y+ LI   C +  +D+  KLL  M    ++ D  TYNTLI  Y
Sbjct: 500 KLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGY 559

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNH 303
           CK     +AL +   ME  G+SPDI+TYN ++ G  +  R   A+ L+  I   G     
Sbjct: 560 CKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLEL 619

Query: 304 VTYTTLIDGYCRANDLEEALRLRE-----------------------------------V 328
            TY  ++ G C+ N  +EALR+ +                                    
Sbjct: 620 STYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAA 679

Query: 329 MAAKGVYPGVVTY-----------------------------------NSILRKLCKEGR 353
           ++A G+ P V TY                                   NSI+RKL + G 
Sbjct: 680 LSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGD 739

Query: 354 IRDANRLLNEMNEKKIAPDNVTCNTLIN 381
           I  A   L  ++EK  + +  T +  ++
Sbjct: 740 ITRAGTYLFMIDEKHFSLEASTASLFLD 767


>gi|242073384|ref|XP_002446628.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
 gi|241937811|gb|EES10956.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
          Length = 614

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 115/408 (28%), Positives = 207/408 (50%), Gaps = 9/408 (2%)

Query: 124 DDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVH-NLMPHLHACTVLLNSLAKDRLTD 182
           DDP   + ++S +   YA+  +  DG  +   + +   +   L A + L+N L       
Sbjct: 173 DDP---APLVSAVAKAYADEGLLPDGCSLLLLLALRRGVRVPLPAWSDLMNRLPS---VP 226

Query: 183 MVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLI 242
             +  Y +++  GV      +N+L+    +S  +     +  EM  + V   + T+NTL+
Sbjct: 227 EAYAFYLQLLDAGVPPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGVPPTVVTFNTLM 286

Query: 243 ALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GAT 300
           +  CK      A A++  M + G++PD+ TY + + G C+ GR+++A  +F +++  G  
Sbjct: 287 SGMCKASDLNSANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERGVN 346

Query: 301 PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRL 360
           PN V +TTLID +C+  ++   L L   MA +G+   +V YN++   LC+   ++ AN +
Sbjct: 347 PNTVVFTTLIDAHCKEGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAANDI 406

Query: 361 LNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCK 420
           + EM    + PD VT  TLI+ +CK G+   AM++K  M + G+ LD+ TY  LI G  K
Sbjct: 407 VEEMRNNGLKPDKVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISGLSK 466

Query: 421 AKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSV 480
           +     ++ +L  M++AG  P   +Y+ ++D +C  ++ +   KLL E  ++G    V  
Sbjct: 467 SGRSVDSERILCEMMEAGLEPDNTTYTMVIDAFCKNSDVKTGFKLLKEMQNKGRKPGVVT 526

Query: 481 YRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
           Y  ++  FC   ++  A  L N M   G+  D + Y  L   + + G+
Sbjct: 527 YNVVMNGFCILGQMKNADMLLNAMLNIGVCPDDITYNILLDGHCKHGK 574



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 89/292 (30%), Positives = 155/292 (53%), Gaps = 2/292 (0%)

Query: 253 EALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLI 310
           EA A   ++   G+ P+   +N L+    R G++  AR +F ++  +G  P  VT+ TL+
Sbjct: 227 EAYAFYLQLLDAGVPPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGVPPTVVTFNTLM 286

Query: 311 DGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIA 370
            G C+A+DL  A  LR +MA  GV P V TY + ++ LCK GRI+DA  +  EM E+ + 
Sbjct: 287 SGMCKASDLNSANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERGVN 346

Query: 371 PDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL 430
           P+ V   TLI+A+CK G+ A+ +++   M   G+  D   Y AL +G C+ +++  A ++
Sbjct: 347 PNTVVFTTLIDAHCKEGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAANDI 406

Query: 431 LFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCK 490
           +  M + G  P   +Y+ L+DG+C +   +  +++  E    G+ +D   Y  LI    K
Sbjct: 407 VEEMRNNGLKPDKVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISGLSK 466

Query: 491 KEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRR 542
             +   ++R+   M   G+  D+  YT +  A+ +  + K    +L +M  +
Sbjct: 467 SGRSVDSERILCEMMEAGLEPDNTTYTMVIDAFCKNSDVKTGFKLLKEMQNK 518



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 86/278 (30%), Positives = 156/278 (56%), Gaps = 5/278 (1%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           QD +++F++MR   + P+    T L+++  K+       +++++M   G+  ++  YN L
Sbjct: 331 QDAVEMFEEMRERGVNPNTVVFTTLIDAHCKEGNVAAGLELHREMATRGIKTDLVAYNAL 390

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
            +  C+  D+     ++ EM    ++ D  TY TLI  +CK+G    A+ ++  M  EG+
Sbjct: 391 ANGLCRVRDLKAANDIVEEMRNNGLKPDKVTYTTLIDGFCKEGELDMAMEMKQEMSDEGV 450

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
           + D VTY +LI G  + GR  ++ R+  ++   G  P++ TYT +ID +C+ +D++   +
Sbjct: 451 ALDEVTYTTLISGLSKSGRSVDSERILCEMMEAGLEPDNTTYTMVIDAFCKNSDVKTGFK 510

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           L + M  KG  PGVVTYN ++   C  G++++A+ LLN M    + PD++T N L++ +C
Sbjct: 511 LLKEMQNKGRKPGVVTYNVVMNGFCILGQMKNADMLLNAMLNIGVCPDDITYNILLDGHC 570

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAK 422
           K G    A ++K+     G++ D   Y +LI+ F K K
Sbjct: 571 KHGKVRDAEELKS---AKGMVSDFGLYTSLINEFVKKK 605



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 66/234 (28%), Positives = 116/234 (49%)

Query: 333 GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
           GV P    +N ++R + + G++  A  + +EM  + + P  VT NTL++  CK  D  SA
Sbjct: 239 GVPPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGVPPTVVTFNTLMSGMCKASDLNSA 298

Query: 393 MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
             ++  M +AG+  D +TY A + G CKA  +  A E+   M + G +P+   ++ L+D 
Sbjct: 299 NALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERGVNPNTVVFTTLIDA 358

Query: 453 YCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGD 512
           +C + N  A L+L  E  +RG+  D+  Y AL    C+   +  A  +   M+ NG+  D
Sbjct: 359 HCKEGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAANDIVEEMRNNGLKPD 418

Query: 513 SVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
            V YT+L   + + GE     ++  +M    + +    Y +  +  +K    +D
Sbjct: 419 KVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISGLSKSGRSVD 472



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 34/158 (21%), Positives = 76/158 (48%)

Query: 398 RMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKN 457
           ++L+AG+  +   +  L+    ++ ++  A+ +   ML  G  P+  +++ L+ G C  +
Sbjct: 234 QLLDAGVPPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGVPPTVVTFNTLMSGMCKAS 293

Query: 458 NEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYT 517
           +  +   L       G+  DV  Y A ++  CK  ++  A  +F  M+  G+  ++V++T
Sbjct: 294 DLNSANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERGVNPNTVVFT 353

Query: 518 SLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFS 555
           +L  A+ + G   A  ++  +M  R +   L  Y + +
Sbjct: 354 TLIDAHCKEGNVAAGLELHREMATRGIKTDLVAYNALA 391



 Score = 46.2 bits (108), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 26/131 (19%), Positives = 54/131 (41%)

Query: 434 MLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEK 493
           +LDAG  P    ++ L+          +   + DE + RG+   V  +  L+   CK   
Sbjct: 235 LLDAGVPPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGVPPTVVTFNTLMSGMCKASD 294

Query: 494 VDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRS 553
           ++ A  L  LM   G+  D   Y +      +AG  +   ++ ++M  R +     ++ +
Sbjct: 295 LNSANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERGVNPNTVVFTT 354

Query: 554 FSASYAKDNEI 564
              ++ K+  +
Sbjct: 355 LIDAHCKEGNV 365


>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
          Length = 694

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 130/481 (27%), Positives = 233/481 (48%), Gaps = 35/481 (7%)

Query: 132 VLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYK-- 189
           V   L+   A+  +  D ++   ++R   + P+   C  +L  LA++R   +V ++++  
Sbjct: 135 VFDTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGLVRRLFEHL 194

Query: 190 -----------------------------KMVQLGVVANIHLYNVLIHACCKSSDVDKVE 220
                                        +M  +G   ++  YN LI    K  ++++VE
Sbjct: 195 PAPNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVE 254

Query: 221 KLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGF 280
            L+ EM      AD+ TYN LI  + K G   +A +    M+R G+  ++VT ++ +  F
Sbjct: 255 LLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAF 314

Query: 281 CREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGV 338
           C+EG +REA +LF    ++G  PN  TYT+L+DG C+A  L++A+ L + M  +G+ P V
Sbjct: 315 CKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNV 374

Query: 339 VTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNR 398
           VTY  ++  LCKEG++  A+ +L+ M    +  + +   TLI+ +    ++  A+ + N 
Sbjct: 375 VTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNE 434

Query: 399 MLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNN 458
           M   G+ LD   Y  LI G CK +++D AK LL  M D G  P+   Y+ ++D +     
Sbjct: 435 MKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGK 494

Query: 459 EEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTS 518
           E   + LL +    GL  +V  Y ALI   CK   +  A   F+ M+  G+  +  +YT+
Sbjct: 495 ESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTT 554

Query: 519 LAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFW--SHVVDRG 576
           L   + + G       ++++M  + + +   +Y S    + K  ++   F   + +++ G
Sbjct: 555 LIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETG 614

Query: 577 L 577
           L
Sbjct: 615 L 615



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 115/379 (30%), Positives = 190/379 (50%), Gaps = 2/379 (0%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N   LS  V  +    + ++ +++F QMRV  +MP+    T L++   K    D    + 
Sbjct: 303 NVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLL 362

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
            +MV  G+V N+  Y V++   CK   V   + +L  ME   V+A+   Y TLI  +   
Sbjct: 363 DEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMN 422

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR--DIKGATPNHVTY 306
                AL + + M+ +G+  D+  Y +LI G C+  ++ EA+ L    D  G  PN V Y
Sbjct: 423 KNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIY 482

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
           TT++D + +A    EA+ L   +   G+ P VVTY +++  LCK G I +A    ++M E
Sbjct: 483 TTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRE 542

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
             + P+     TLI+ +CKIG  + A+ + N M++ G+ LD+  Y +LI G  K  ++  
Sbjct: 543 LGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQG 602

Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
           A  L   M++ G       Y+  + G+CN N  +    +L E +  G+  D + Y  LIR
Sbjct: 603 AFALKAKMIETGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLIR 662

Query: 487 RFCKKEKVDYAQRLFNLMQ 505
           ++ K   ++ A  L N M+
Sbjct: 663 KYQKLGNMEEASSLQNEME 681



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 110/406 (27%), Positives = 195/406 (48%), Gaps = 37/406 (9%)

Query: 171 LLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKD 230
           L+N  +K    +  +  + +M +LGV+AN+   +  + A CK   V +  KL  +M  + 
Sbjct: 275 LINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRG 334

Query: 231 VRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREAR 290
           +  + FTY +L+   CK G   +A+ + D M  +G+ P++VTY  ++ G C+EG++  A 
Sbjct: 335 MMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVAD 394

Query: 291 RLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
            +   ++  G   N + YTTLI G+    + E AL L   M  KG+   V  Y +++  L
Sbjct: 395 DVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGL 454

Query: 349 CKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ 408
           CK  ++ +A  LL++M++  + P+ V   T+++A+ K G  + A+ + +++ ++GL  + 
Sbjct: 455 CKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNV 514

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
            TY ALI G CKA  +  A      M + G  P+   Y+ L+DG+C   +    + L++E
Sbjct: 515 VTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNE 574

Query: 469 FVSRGLCVDVSVYRAL-----------------------------------IRRFCKKEK 493
            V +G+ +D  VY +L                                   I  FC    
Sbjct: 575 MVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQLDLYCYTCFISGFCNMNM 634

Query: 494 VDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
           +  A+ + + M G GI  D   Y  L   Y + G  +  S + ++M
Sbjct: 635 MQEARGVLSEMIGTGITPDKTAYNCLIRKYQKLGNMEEASSLQNEM 680



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 107/326 (32%), Positives = 165/326 (50%), Gaps = 2/326 (0%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D + + D+M    L+P++   TV+++ L K+    +   V   M + GV AN  LY  LI
Sbjct: 357 DAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLI 416

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           H    + + ++   LL EM+ K +  D+  Y TLI   CK     EA ++  +M+  G+ 
Sbjct: 417 HGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLR 476

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
           P+ V Y +++  F + G+  EA  L   I   G  PN VTY  LIDG C+A  + EA+  
Sbjct: 477 PNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISH 536

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
            + M   G+ P V  Y +++   CK G +  A  L+NEM +K ++ D V   +LI+ + K
Sbjct: 537 FDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMK 596

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            GD   A  +K +M+E GL LD + Y   I GFC    M  A+ +L  M+  G +P   +
Sbjct: 597 QGDLQGAFALKAKMIETGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTA 656

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVS 471
           Y+ L+  Y    N E    L +E  S
Sbjct: 657 YNCLIRKYQKLGNMEEASSLQNEMES 682


>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
          Length = 1144

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 125/465 (26%), Positives = 218/465 (46%), Gaps = 42/465 (9%)

Query: 146 TQDGLQVFDQMR--VHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLY 203
           +Q+ L++   M     +  P + + T ++N   K+   D  +  Y +M+  G++ N+  Y
Sbjct: 178 SQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTY 237

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER 263
           + +I A CK+  +DK  ++L  M    V  +  TYN+++  YC  G   EA+    +M  
Sbjct: 238 SSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHS 297

Query: 264 EGISPDIVTYNSLIHGFCREGRMREARRLF-----RDIK--------------------- 297
           +G+ PD+VTYNSL+   C+ GR  EAR++F     R +K                     
Sbjct: 298 DGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVE 357

Query: 298 -----------GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILR 346
                      G  PNH  ++ LI  Y +   +++A+ +   M  +G+ P  VTY +++ 
Sbjct: 358 MHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIG 417

Query: 347 KLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLML 406
            LCK GR+ DA R   +M +++++P N+  N+LI++ C       A ++   ML+ G+ L
Sbjct: 418 ILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICL 477

Query: 407 DQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLL 466
           D   + ++I   CK   +  +++L   M+  G  P   +YS L+DGYC     +   KLL
Sbjct: 478 DTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLL 537

Query: 467 DEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRA 526
              VS G+  D   Y  LI  +CK  +++ A  LF  M+ +G+  D + Y  +    ++ 
Sbjct: 538 ASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQT 597

Query: 527 GEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDN---EILDLF 568
               A  ++   +      + L  Y        K+N   E L +F
Sbjct: 598 RRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMF 642



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 123/440 (27%), Positives = 205/440 (46%), Gaps = 40/440 (9%)

Query: 167 ACTVLLNSLAKD-RLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCE 225
           A T LL  L  D R +D +  V ++M QLG + N+  YN+L+   C  +   +  +LL  
Sbjct: 128 AFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQM 187

Query: 226 M--EFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCRE 283
           M  +  D   D+ +Y T+I  + K+G   +A      M   GI P++VTY+S+I   C+ 
Sbjct: 188 MPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKA 247

Query: 284 GRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTY 341
             M +A  +   +   G  PN  TY +++ GYC +   +EA+   + M + GV P VVTY
Sbjct: 248 QAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTY 307

Query: 342 NSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN-------------------- 381
           NS++  LCK GR  +A ++ + M ++ + P+  T  TL+                     
Sbjct: 308 NSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVR 367

Query: 382 ---------------AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
                          AY K G    AM V ++M + GL  D  TY  +I   CK+  ++ 
Sbjct: 368 NGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVED 427

Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
           A      M+D   SP    Y+ L+   C  +  +   +L+ E + RG+C+D   + ++I 
Sbjct: 428 AMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIID 487

Query: 487 RFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMI 546
             CK+ +V  +++LF+LM   G+  D + Y++L   Y  AG+    + +L  M    +  
Sbjct: 488 SHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKP 547

Query: 547 TLKIYRSFSASYAKDNEILD 566
               Y +    Y K + + D
Sbjct: 548 DCVTYNTLINGYCKISRMED 567



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 105/373 (28%), Positives = 188/373 (50%), Gaps = 4/373 (1%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLA-KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           ++FD M    L P +     LL   A K  L +M   +   MV+ G+  N +++++LI A
Sbjct: 325 KMFDSMTKRGLKPEITTYGTLLQGYATKGALVEM-HGLLDLMVRNGIHPNHYVFSILICA 383

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
             K   VD+   +  +M  + +  D  TY T+I + CK G   +A+   ++M  E +SP 
Sbjct: 384 YAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPG 443

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLRE 327
            + YNSLIH  C   +  +A+ L  ++  +G   + + + ++ID +C+   + E+ +L +
Sbjct: 444 NIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFD 503

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
           +M   GV P ++TY++++   C  G++ +A +LL  M    + PD VT NTLIN YCKI 
Sbjct: 504 LMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKIS 563

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
               A+ +   M  +G+  D  TY  ++ G  + +    AKEL  G+ ++G      +Y+
Sbjct: 564 RMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYN 623

Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGN 507
            ++ G C  N  +  L++        L ++   +  +I    K  + D A+ LF  +  N
Sbjct: 624 IILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSAN 683

Query: 508 GILGDSVIYTSLA 520
           G++ D   Y+ +A
Sbjct: 684 GLVPDVRTYSLMA 696



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 123/448 (27%), Positives = 206/448 (45%), Gaps = 13/448 (2%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG---VVANIHLY 203
           +D   VFD++        ++     L  +A+      V + Y +M + G   V  N+  Y
Sbjct: 36  EDARHVFDELLRRGRGASIYGLNCALADVARHSPAAAVSR-YNRMARAGADEVTPNLCTY 94

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL-AVQDRME 262
            +LI +CC +  +D     L  +  K  R D   +  L+   C      +A+  V  RM 
Sbjct: 95  GILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 154

Query: 263 REGISPDIVTYNSLIHGFCREGRMREARRLFR----DIKGATPNHVTYTTLIDGYCRAND 318
           + G  P++ +YN L+ G C E R +EA  L +    D     P+ V+YTT+I+G+ +  D
Sbjct: 155 QLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGD 214

Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT 378
           L++A      M  +G+ P VVTY+SI+  LCK   +  A  +L  M +  + P+  T N+
Sbjct: 215 LDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNS 274

Query: 379 LINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAG 438
           +++ YC  G    A+    +M   G+  D  TY +L+   CK      A+++   M   G
Sbjct: 275 IVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRG 334

Query: 439 FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQ 498
             P   +Y  L+ GY  K     +  LLD  V  G+  +  V+  LI  + K+ KVD A 
Sbjct: 335 LKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAM 394

Query: 499 RLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSAS- 557
            +F+ M+  G+  D+V Y ++     ++G  +      + M   RL     +Y S   S 
Sbjct: 395 LVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSL 454

Query: 558 --YAKDNEILDLFWSHVVDRGLMSKHIF 583
             + K ++  +L    ++DRG+    IF
Sbjct: 455 CIFDKWDKAKELIL-EMLDRGICLDTIF 481



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 123/461 (26%), Positives = 211/461 (45%), Gaps = 22/461 (4%)

Query: 57  PSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLE---KIALRDFLSTP 113
           P  +  F K   S     +  + ++ +++  L KN     A+ M +   K  L+  ++T 
Sbjct: 285 PKEAIGFLKKMHS--DGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTY 342

Query: 114 SVL-------NALVKIHDDPD--------GNSHVLSWLVIFYANLKMTQDGLQVFDQMRV 158
             L        ALV++H   D         N +V S L+  YA        + VF +MR 
Sbjct: 343 GTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQ 402

Query: 159 HNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDK 218
             L P       ++  L K    +   + +++M+   +     +YN LIH+ C     DK
Sbjct: 403 QGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDK 462

Query: 219 VEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIH 278
            ++L+ EM  + +  D   +N++I  +CK+G   E+  + D M R G+ PDI+TY++LI 
Sbjct: 463 AKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLID 522

Query: 279 GFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYP 336
           G+C  G+M EA +L   +   G  P+ VTY TLI+GYC+ + +E+AL L   M + GV P
Sbjct: 523 GYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSP 582

Query: 337 GVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVK 396
            ++TYN IL+ L +  R   A  L   + E     +  T N +++  CK   T  A+++ 
Sbjct: 583 DIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMF 642

Query: 397 NRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNK 456
             +    L L+  T+  +I    K    D AK+L   +   G  P   +YS + +    +
Sbjct: 643 QNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQ 702

Query: 457 NNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYA 497
              E L  L       G   +  +  +++R+  ++  +  A
Sbjct: 703 GLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRA 743



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 110/443 (24%), Positives = 204/443 (46%), Gaps = 20/443 (4%)

Query: 80  SHWTMIHILTK----NKHFKSAQNMLEKIALRDFLSTPSVLNALVK-------------- 121
           S+ T+I+   K    +K + +   ML++  L + ++  S++ AL K              
Sbjct: 201 SYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSM 260

Query: 122 IHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLT 181
           + +    N    + +V  Y +    ++ +    +M    + P +     L++ L K+   
Sbjct: 261 VKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRC 320

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
               K++  M + G+   I  Y  L+        + ++  LL  M    +  + + ++ L
Sbjct: 321 TEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSIL 380

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGA 299
           I  Y K+G   +A+ V  +M ++G++PD VTY ++I   C+ GR+ +A R F  +  +  
Sbjct: 381 ICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERL 440

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
           +P ++ Y +LI   C  +  ++A  L   M  +G+    + +NSI+   CKEGR+ ++ +
Sbjct: 441 SPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEK 500

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
           L + M    + PD +T +TLI+ YC  G    A K+   M+  G+  D  TY  LI+G+C
Sbjct: 501 LFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYC 560

Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
           K   M+ A  L   M  +G SP   +Y+ ++ G        A  +L       G  +++S
Sbjct: 561 KISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELS 620

Query: 480 VYRALIRRFCKKEKVDYAQRLFN 502
            Y  ++   CK    D A R+F 
Sbjct: 621 TYNIILHGLCKNNLTDEALRMFQ 643



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/268 (26%), Positives = 109/268 (40%), Gaps = 72/268 (26%)

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
           K++  MV++GV  +I  Y+ LI   C +  +D+  KLL  M    ++ D  TYNTLI  Y
Sbjct: 500 KLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGY 559

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNH 303
           CK     +AL +   ME  G+SPDI+TYN ++ G  +  R   A+ L+  I   G     
Sbjct: 560 CKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLEL 619

Query: 304 VTYTTLIDGYCRANDLEEALRLRE-----------------------------------V 328
            TY  ++ G C+ N  +EALR+ +                                    
Sbjct: 620 STYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAA 679

Query: 329 MAAKGVYPGVVTY-----------------------------------NSILRKLCKEGR 353
           ++A G+ P V TY                                   NSI+RKL + G 
Sbjct: 680 LSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGD 739

Query: 354 IRDANRLLNEMNEKKIAPDNVTCNTLIN 381
           I  A   L  ++EK  + +  T +  ++
Sbjct: 740 ITRAGTYLFMIDEKHFSLEASTASLFLD 767


>gi|357449261|ref|XP_003594907.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483955|gb|AES65158.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1385

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 140/514 (27%), Positives = 228/514 (44%), Gaps = 22/514 (4%)

Query: 59  LSCAFFKWAESAVPNYKHSLQSHW--TMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVL 116
           L+  F  W     PN + +  +H   T  HIL K + +  A+  L  +   D +   +V 
Sbjct: 38  LALKFLNWVIKK-PNLEINHLTHIISTTTHILVKARMYGYAKTTLSHMLHMD-VGFNNVF 95

Query: 117 NALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLA 176
            AL++ +   + N  V   L+       M  D ++ F  M      P +  C ++L SL 
Sbjct: 96  GALMETYPFCNSNPAVFDLLIRVCLRENMVGDAVEAFRLMGFRGFSPSVFTCNMVLGSLV 155

Query: 177 KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLF 236
           KDR  D+ W  +K+M+   V  N+  +N+L++A C+         LL +M+         
Sbjct: 156 KDREVDLFWSFFKEMIANRVSPNVATFNILLNALCERGKFKSAGVLLRKMDETGHFPTAV 215

Query: 237 TYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI 296
           TYNTL+  YCKKG +  A  + D M  +GI+ D+ TYN LI   CR+ R  +   + R +
Sbjct: 216 TYNTLLNWYCKKGRYKAASELIDAMASKGIAADVCTYNVLIDDLCRKSRSAKGYLILRRM 275

Query: 297 KG--ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRI 354
           +     PN +TY TLI+G  +   +  A ++ E M+   + P  VTYN+++   C  G I
Sbjct: 276 RKNMVYPNEITYNTLINGLVKEGKIGVATKVFEEMSLCNLLPNSVTYNTLIFGHCSNGNI 335

Query: 355 RDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKAL 414
            +A RL + M    + P+ VT   L+N   K         V  RM   G+ +   +Y  +
Sbjct: 336 EEALRLCDVMVSHGLRPNEVTYGALLNGISKHAQFGLVSSVLERMRMDGVRVGHISYTTM 395

Query: 415 IHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGL 474
           I G CK   ++ A +LL  ML    SP   ++S LV+G                F+  GL
Sbjct: 396 IDGLCKNGLLEEAVQLLDDMLKVSVSPDIVTFSVLVNG----------------FLKTGL 439

Query: 475 CVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSD 534
             +  ++  LI  +CK   +  A   + +M  +G + D    + L  ++ R G  +    
Sbjct: 440 VPNRVLHSTLIYNYCKMGNLKEALNAYAVMNQSGHVSDHFTSSVLVASFCRCGRLEEAEY 499

Query: 535 ILDDMYRRRLMITLKIYRSFSASYAKDNEILDLF 568
            +D M R  L  +   +     +Y    + L  F
Sbjct: 500 FVDHMSRMGLAPSSVTFDCIIDTYGNSGDALKAF 533



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 115/446 (25%), Positives = 189/446 (42%), Gaps = 50/446 (11%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           +VF++M + NL+P+      L+     +   +   ++   MV  G+  N   Y  L++  
Sbjct: 305 KVFEEMSLCNLLPNSVTYNTLIFGHCSNGNIEEALRLCDVMVSHGLRPNEVTYGALLNGI 364

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
            K +    V  +L  M    VR    +Y T+I   CK G+  EA+ + D M +  +SPDI
Sbjct: 365 SKHAQFGLVSSVLERMRMDGVRVGHISYTTMIDGLCKNGLLEEAVQLLDDMLKVSVSPDI 424

Query: 271 VTYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMA 330
           VT++ L++GF +               G  PN V ++TLI  YC+  +L+EAL    VM 
Sbjct: 425 VTFSVLVNGFLK--------------TGLVPNRVLHSTLIYNYCKMGNLKEALNAYAVMN 470

Query: 331 AKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTA 390
             G      T + ++   C+ GR+ +A   ++ M+   +AP +VT + +I+ Y   GD  
Sbjct: 471 QSGHVSDHFTSSVLVASFCRCGRLEEAEYFVDHMSRMGLAPSSVTFDCIIDTYGNSGDAL 530

Query: 391 SAMKVKNRMLEAGLMLDQFTY----------------KALIHG----------------- 417
            A  V ++M   G +  QFTY                K  +H                  
Sbjct: 531 KAFSVFDKMNSLGHLPSQFTYEGLLKGLLIGGHINEAKIFMHRPSSIPYAIGSTFYNTML 590

Query: 418 --FCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG-L 474
               ++  +  A  LL  M+   F P   +Y+ L+ G C K      L L    + +G L
Sbjct: 591 TLTSRSGNLSNAVALLDEMVMNNFVPDSFTYTSLIAGLCRKGKMVPALLLSGRAIEKGLL 650

Query: 475 CVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSD 534
             + ++Y +L+    K+     A  +F  M   G+  D++ +  L   Y R G+    +D
Sbjct: 651 SPNPAMYTSLVDGLLKEGHSKAALYMFEDMLNEGVQPDAIAFNVLLDRYSRKGKMSKVND 710

Query: 535 ILDDMYRRRLMITLKIYRSFSASYAK 560
           IL  M  R L   L  Y      Y+K
Sbjct: 711 ILSTMRSRSLCFNLATYNILLHGYSK 736



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 100/405 (24%), Positives = 175/405 (43%), Gaps = 38/405 (9%)

Query: 202 LYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDR- 260
            YN ++    +S ++     LL EM   +   D FTY +LIA  C+KG    AL +  R 
Sbjct: 585 FYNTMLTLTSRSGNLSNAVALLDEMVMNNFVPDSFTYTSLIAGLCRKGKMVPALLLSGRA 644

Query: 261 MEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRAND 318
           +E+  +SP+   Y SL+ G  +EG  + A  +F D+  +G  P+ + +  L+D Y R   
Sbjct: 645 IEKGLLSPNPAMYTSLVDGLLKEGHSKAALYMFEDMLNEGVQPDAIAFNVLLDRYSRKGK 704

Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT 378
           + +   +   M ++ +   + TYN +L    K   +   ++L NEM     APD +T ++
Sbjct: 705 MSKVNDILSTMRSRSLCFNLATYNILLHGYSKRHGMARCSKLYNEMIIHGFAPDRLTWHS 764

Query: 379 LINAYCKIGDTASAMKVKNRMLEAGLMLDQFT---------------------------- 410
           LI  YCK G    A+K   ++   G  +D FT                            
Sbjct: 765 LILGYCKSGSLDVAVKFLRKITVEGFKVDCFTLNVLVSKLCERNEIKMAFDLVKQLNMLG 824

Query: 411 -------YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALL 463
                  Y +L +GF +    D A+ +L  +L+ G++P+   ++ L+ G C   N +  +
Sbjct: 825 VTPNVDTYNSLFNGFVRTCSFDEARCILHALLENGYAPTCKQFTTLIRGMCRMGNVKGAM 884

Query: 464 KLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAY 523
           +L DE    G+        A+IR   +  K D A R+  +M    I+     +T+L + Y
Sbjct: 885 ELQDEMKILGVSSQGVAMSAIIRGLARSRKTDEATRILGIMLEMQIIPTVATFTTLMHTY 944

Query: 524 WRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLF 568
            + G      ++   M +  + + +  Y    +    D +I   F
Sbjct: 945 CKEGNVAKALELRSVMEQCHVKLDVAAYNVLISGLCADGDIQAAF 989



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 101/388 (26%), Positives = 181/388 (46%), Gaps = 3/388 (0%)

Query: 161  LMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVE 220
            L P+    T L++ L K+  +     +++ M+  GV  +   +NVL+    +   + KV 
Sbjct: 650  LSPNPAMYTSLVDGLLKEGHSKAALYMFEDMLNEGVQPDAIAFNVLLDRYSRKGKMSKVN 709

Query: 221  KLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGF 280
             +L  M  + +  +L TYN L+  Y K+        + + M   G +PD +T++SLI G+
Sbjct: 710  DILSTMRSRSLCFNLATYNILLHGYSKRHGMARCSKLYNEMIIHGFAPDRLTWHSLILGY 769

Query: 281  CREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGV 338
            C+ G +  A +  R I  +G   +  T   L+   C  N+++ A  L + +   GV P V
Sbjct: 770  CKSGSLDVAVKFLRKITVEGFKVDCFTLNVLVSKLCERNEIKMAFDLVKQLNMLGVTPNV 829

Query: 339  VTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNR 398
             TYNS+     +     +A  +L+ + E   AP      TLI   C++G+   AM++++ 
Sbjct: 830  DTYNSLFNGFVRTCSFDEARCILHALLENGYAPTCKQFTTLIRGMCRMGNVKGAMELQDE 889

Query: 399  MLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNN 458
            M   G+        A+I G  ++++ D A  +L  ML+    P+  +++ L+  YC + N
Sbjct: 890  MKILGVSSQGVAMSAIIRGLARSRKTDEATRILGIMLEMQIIPTVATFTTLMHTYCKEGN 949

Query: 459  EEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTS 518
                L+L        + +DV+ Y  LI   C    +  A +L+  M+   I  ++ IY  
Sbjct: 950  VAKALELRSVMEQCHVKLDVAAYNVLISGLCADGDIQAAFKLYEEMEQRDIWPNTSIYIV 1009

Query: 519  LAYAYWRAGEPKACSD-ILDDMYRRRLM 545
            L  ++   G     S+ +L D+  R LM
Sbjct: 1010 LIDSFLCTGNYIVESEKLLRDLRTRELM 1037



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 100/354 (28%), Positives = 161/354 (45%), Gaps = 12/354 (3%)

Query: 238 YNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF-RDI 296
           YNT++ L  + G    A+A+ D M      PD  TY SLI G CR+G+M  A  L  R I
Sbjct: 586 YNTMLTLTSRSGNLSNAVALLDEMVMNNFVPDSFTYTSLIAGLCRKGKMVPALLLSGRAI 645

Query: 297 KGA--TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRI 354
           +    +PN   YT+L+DG  +    + AL + E M  +GV P  + +N +L +  ++G++
Sbjct: 646 EKGLLSPNPAMYTSLVDGLLKEGHSKAALYMFEDMLNEGVQPDAIAFNVLLDRYSRKGKM 705

Query: 355 RDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKAL 414
              N +L+ M  + +  +  T N L++ Y K    A   K+ N M+  G   D+ T+ +L
Sbjct: 706 SKVNDILSTMRSRSLCFNLATYNILLHGYSKRHGMARCSKLYNEMIIHGFAPDRLTWHSL 765

Query: 415 IHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGL 474
           I G+CK+  +D+A + L  +   GF     + + LV   C +N  +    L+ +    G+
Sbjct: 766 ILGYCKSGSLDVAVKFLRKITVEGFKVDCFTLNVLVSKLCERNEIKMAFDLVKQLNMLGV 825

Query: 475 CVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSD 534
             +V  Y +L   F +    D A+ + + +  NG       +T+L     R G  K   +
Sbjct: 826 TPNVDTYNSLFNGFVRTCSFDEARCILHALLENGYAPTCKQFTTLIRGMCRMGNVKGAME 885

Query: 535 ILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKEMQL 588
           + D+M         KI    S   A    I  L  S   D       I  EMQ+
Sbjct: 886 LQDEM---------KILGVSSQGVAMSAIIRGLARSRKTDEATRILGIMLEMQI 930



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/152 (26%), Positives = 76/152 (50%), Gaps = 1/152 (0%)

Query: 147  QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
            +  +++ D+M++  +     A + ++  LA+ R TD   ++   M+++ ++  +  +  L
Sbjct: 881  KGAMELQDEMKILGVSSQGVAMSAIIRGLARSRKTDEATRILGIMLEMQIIPTVATFTTL 940

Query: 207  IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
            +H  CK  +V K  +L   ME   V+ D+  YN LI+  C  G    A  + + ME+  I
Sbjct: 941  MHTYCKEGNVAKALELRSVMEQCHVKLDVAAYNVLISGLCADGDIQAAFKLYEEMEQRDI 1000

Query: 267  SPDIVTYNSLIHGF-CREGRMREARRLFRDIK 297
             P+   Y  LI  F C    + E+ +L RD++
Sbjct: 1001 WPNTSIYIVLIDSFLCTGNYIVESEKLLRDLR 1032



 Score = 40.0 bits (92), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 63/141 (44%), Gaps = 4/141 (2%)

Query: 133  LSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMV 192
            +S ++   A  + T +  ++   M    ++P +   T L+++  K+       ++   M 
Sbjct: 902  MSAIIRGLARSRKTDEATRILGIMLEMQIIPTVATFTTLMHTYCKEGNVAKALELRSVME 961

Query: 193  QLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKG--- 249
            Q  V  ++  YNVLI   C   D+    KL  EME +D+  +   Y  LI  +   G   
Sbjct: 962  QCHVKLDVAAYNVLISGLCADGDIQAAFKLYEEMEQRDIWPNTSIYIVLIDSFLCTGNYI 1021

Query: 250  MHYEALAVQDRMEREGISPDI 270
            +  E L ++D   RE +S D+
Sbjct: 1022 VESEKL-LRDLRTRELMSLDL 1041


>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
          Length = 687

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 107/337 (31%), Positives = 176/337 (52%), Gaps = 3/337 (0%)

Query: 231 VRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISP-DIVTYNSLIHGFCREGRMREA 289
            R D F +N  +      G   EA+ +  RM R+G  P +  +YN +I G  R GR  +A
Sbjct: 156 ARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDA 215

Query: 290 RRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRK 347
             +F ++  +   PNH+TY T+IDG+ +  DLE    LR+ M   G+ P  +TYN +L  
Sbjct: 216 VEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSG 275

Query: 348 LCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLD 407
           LC+ GR+ + + LL+EM  +K+ PD  T + L +   + GD+ + + +  + L+ G+ + 
Sbjct: 276 LCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIG 335

Query: 408 QFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLD 467
            +T   L++G CK  ++ IA+E+L  +++AG  P+   Y+ L++GYC     E       
Sbjct: 336 DYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFG 395

Query: 468 EFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
           +  SR +  D   Y ALI   CK E++  AQ L   MQ NG+      + +L  AY R G
Sbjct: 396 QMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTG 455

Query: 528 EPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
           + + C  +L +M    L   +  Y S   ++ K+ +I
Sbjct: 456 QLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKI 492



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 106/424 (25%), Positives = 204/424 (48%), Gaps = 2/424 (0%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D ++VFD+M    ++P+      +++   K    +  + +  +MV  G+  N   YNVL+
Sbjct: 214 DAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYNVLL 273

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
              C++  + +   LL EM  + +  D FTY+ L     + G     L++  +  + G++
Sbjct: 274 SGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVT 333

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
               T + L++G C++G++  A  + + +   G  P  V Y TLI+GYC+  +LE A   
Sbjct: 334 IGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFST 393

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
              M ++ + P  +TYN+++  LCK  RI +A  LL EM +  + P   T NTLI+AY +
Sbjct: 394 FGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGR 453

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            G       V + M E GL  +  +Y ++++ FCK  ++  A  +L  M      P+   
Sbjct: 454 TGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQV 513

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+ ++D Y      +    L+++  S G+   +  Y  LI+  C + ++  A+ + N + 
Sbjct: 514 YNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLS 573

Query: 506 GNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEIL 565
            + ++ D+V Y +L  A    G      D+   M++  +  T++ Y    +       ++
Sbjct: 574 NHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLI 633

Query: 566 DLFW 569
           ++ +
Sbjct: 634 EMEY 637



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 104/394 (26%), Positives = 187/394 (47%), Gaps = 2/394 (0%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           + D+M    ++P     ++L + L+++  +  +  ++ K ++ GV    +  ++L++  C
Sbjct: 288 LLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLC 347

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           K   V   E++L  +    +      YNTLI  YC+ G    A +   +M+   I PD +
Sbjct: 348 KDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHI 407

Query: 272 TYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           TYN+LI+G C+  R+  A+ L  +++  G  P   T+ TLID Y R   LE+   +   M
Sbjct: 408 TYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEM 467

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
              G+ P VV+Y SI+   CK G+I +A  +L++M  K + P+    N +I+AY + G  
Sbjct: 468 QENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPN 527

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
             A  +  +M   G+     TY  LI G C   ++  A+E++  + +    P   SY+ L
Sbjct: 528 DQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTL 587

Query: 450 VDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGI 509
           +   C + N +  L L       G+   V  Y  LI       ++   + L+  M  N +
Sbjct: 588 ISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQKMMQNNV 647

Query: 510 LGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRR 543
           +  + I+  +  AY + G      D+  +M ++R
Sbjct: 648 VPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKR 681



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 72/319 (22%), Positives = 143/319 (44%), Gaps = 24/319 (7%)

Query: 35  ASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHF 94
           A  + +  I+  L+N Y  C    L  AF  + +    + K    ++  +I+ L K +  
Sbjct: 365 AGLVPTRVIYNTLINGY--CQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERI 422

Query: 95  KSAQNMLEKIALRDFLSTPSVLNALVKIHD---------------DPDG-NSHVLSWLVI 138
            +AQ++L ++       T    N L+  +                  +G   +V+S+  I
Sbjct: 423 TNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSI 482

Query: 139 ---FYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
              F  N K+ +  + + D M   +++P+      ++++  +    D  + + +KM   G
Sbjct: 483 VNAFCKNGKIPE-AVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNG 541

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
           +  +I  YN+LI   C  S + + E+++  +    +  D  +YNTLI+  C +G   +AL
Sbjct: 542 ISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKAL 601

Query: 256 AVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGY 313
            +Q RM + GI   + TY+ LI G    GR+ E   L++ +      P++  +  +++ Y
Sbjct: 602 DLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQKMMQNNVVPSNAIHNIMVEAY 661

Query: 314 CRANDLEEALRLREVMAAK 332
            +  +  +A  LR+ M  K
Sbjct: 662 SKYGNEIKAEDLRKEMLQK 680


>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
          Length = 819

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 135/498 (27%), Positives = 219/498 (43%), Gaps = 79/498 (15%)

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           LV+    ++  + G ++ ++M     +P   A + L++ L K       + +  K+ + G
Sbjct: 291 LVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFG 350

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
           V  ++ +YN LI++ CK   +D+ E L   M  K +  +  TY+ LI  +CK+G    AL
Sbjct: 351 VAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVAL 410

Query: 256 AVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGY 313
               +M   GI   +  Y+SLI G C+ G++R A+ LF ++   G  PN V YT+LI GY
Sbjct: 411 HFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGY 470

Query: 314 CRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDN 373
           C+  +L  A RL   M  KG+ P   T+ +++  LC   R+ +AN+L  EM E  + P+ 
Sbjct: 471 CKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNE 530

Query: 374 VTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYK--------------------- 412
           VT N LI  +CK G+T  A ++ + M+E GL+ D +TY+                     
Sbjct: 531 VTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMND 590

Query: 413 ----------------------ALIHGFCKAKEMDIAKELLFGMLDA------------- 437
                                 ALI+G CK   MD A+ L   ML +             
Sbjct: 591 LQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFL 650

Query: 438 ---------------------GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCV 476
                                GF  +  +Y+ L+ G+C     +   ++L   +  G+  
Sbjct: 651 DYLTSEGNIEKAIQLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISP 710

Query: 477 DVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDIL 536
           D   Y  +I  +C++  +  A +L+  M   G+  D+V Y  L Y     GE     ++ 
Sbjct: 711 DCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELR 770

Query: 537 DDMYRRRLMITLKIYRSF 554
           DDM RR +      Y S 
Sbjct: 771 DDMMRRGVKPNRATYNSL 788



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 127/443 (28%), Positives = 213/443 (48%), Gaps = 49/443 (11%)

Query: 130 SHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYK 189
           S VL+ L+     ++  +  L +FD++    L P ++  T ++ SL + +      +V  
Sbjct: 184 SGVLNGLI----RIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIG 239

Query: 190 KMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCK-- 247
           +M   G   ++  YNV I   CK+  V +  ++   + +K +RAD+ TY TL+   CK  
Sbjct: 240 RMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVE 299

Query: 248 ---------------------------------KGMHYEALAVQDRMEREGISPDIVTYN 274
                                            KG    A  + +++++ G++P +  YN
Sbjct: 300 EFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYN 359

Query: 275 SLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAK 332
           +LI+  C++G++ EA  LF ++  KG  PN VTY+ LID +C+   L+ AL     M   
Sbjct: 360 ALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEV 419

Query: 333 GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
           G+   V  Y+S++   CK G++R A  L +EM    + P+ V   +LI+ YCK G+  +A
Sbjct: 420 GIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNA 479

Query: 393 MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
            ++ + M   G+  + +T+ ALI G C A  M  A +L   M++    P+  +Y+ L++G
Sbjct: 480 FRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEG 539

Query: 453 YCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQG------ 506
           +C + N     +LLDE V +GL  D   YR LI   C   +V  A+   N +QG      
Sbjct: 540 HCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLN 599

Query: 507 --NGILGDSVIYTSLAYAYWRAG 527
              G L + V YT+L     + G
Sbjct: 600 EIEGCLPNVVTYTALINGLCKIG 622



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 132/558 (23%), Positives = 252/558 (45%), Gaps = 26/558 (4%)

Query: 8   NSDTKFIKTISAIMLKGH-WAKLLNPN-IASSLTSTAIHKVLLNLYNCCHIPSLSCAFFK 65
           + D++F+  ++ I+     W   LN + I+ +L    + KVL+   +      L+  FF 
Sbjct: 25  SPDSQFVACLTDIVRGNQSWRVALNNSFISQTLKPHHVEKVLIQTLD---DSRLALRFFN 81

Query: 66  WAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIA---------LRDFLSTPSVL 116
           +      N+ HS  S   +IH L ++  +  A ++L+ +             FL +    
Sbjct: 82  FL-GLHKNFDHSTTSFCILIHALVQSNLYWPASSLLQTLLLRGLNPEGLFESFLDSYRKC 140

Query: 117 NALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLA 176
           N    +  D          L+  Y   +   DGL V   M    ++P +   + +LN L 
Sbjct: 141 NFSTTLGFD---------LLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLI 191

Query: 177 KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLF 236
           + R   M   ++ ++V  G+  ++++Y  ++ + C+  D  +  +++  ME       + 
Sbjct: 192 RIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVA 251

Query: 237 TYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI 296
           TYN  I   CK    +EA+ +++ +  +G+  D+ TY +L+ G C+         +  ++
Sbjct: 252 TYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEM 311

Query: 297 K--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRI 354
              G  P+    + L+DG  +  ++  A  L   +   GV P +  YN+++  +CK+G++
Sbjct: 312 IEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKL 371

Query: 355 RDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKAL 414
            +A  L N M  K + P++VT + LI+++CK G    A+    +M E G+    + Y +L
Sbjct: 372 DEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSL 431

Query: 415 IHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGL 474
           I G CK  ++  AK L   M+  G  P+   Y+ L+ GYC +       +L  E   +G+
Sbjct: 432 ISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGI 491

Query: 475 CVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSD 534
             +   + ALI   C   ++  A +LF  M    ++ + V Y  L   + + G      +
Sbjct: 492 SPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFE 551

Query: 535 ILDDMYRRRLMITLKIYR 552
           +LD+M  + L+     YR
Sbjct: 552 LLDEMVEKGLVPDTYTYR 569



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 135/511 (26%), Positives = 233/511 (45%), Gaps = 64/511 (12%)

Query: 75  KHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALV-------KIHDDPD 127
           +  + ++ T++  L K + F++ + M+ ++    F+ + + ++ LV        I    D
Sbjct: 282 RADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFD 341

Query: 128 GNSHVLSWLV---IFYANL---KMTQDGL-----QVFDQMRVHNLMPHLHACTVLLNSLA 176
             + V  + V   +F  N     M +DG       +F+ M    L P+    ++L++S  
Sbjct: 342 LVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFC 401

Query: 177 KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLF 236
           K    D+      KM ++G+ A ++ Y+ LI   CK   +   + L  EM    ++ ++ 
Sbjct: 402 KRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVV 461

Query: 237 TYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI 296
            Y +LI+ YCK+G  + A  +   M  +GISP+  T+ +LI G C   RM EA +LF ++
Sbjct: 462 IYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEM 521

Query: 297 K--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRI 354
                 PN VTY  LI+G+C+  +   A  L + M  KG+ P   TY  ++  LC  GR+
Sbjct: 522 VEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRV 581

Query: 355 RDANRLLNEMNEKK--------IAPDNVTCNTLINAYCKIG------------------- 387
            +A   +N++  ++          P+ VT   LIN  CKIG                   
Sbjct: 582 SEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLP 641

Query: 388 ----------------DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
                           +   A+++ + +LE G + +  TY  LI GFCK   +  A E+L
Sbjct: 642 NQNTYACFLDYLTSEGNIEKAIQLHDVLLE-GFLANTVTYNILIRGFCKLGRIQEAAEVL 700

Query: 432 FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
             M+D+G SP   SYS ++  YC + + +  +KL +  ++RG+  D   Y  LI   C  
Sbjct: 701 VNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVT 760

Query: 492 EKVDYAQRLFNLMQGNGILGDSVIYTSLAYA 522
            ++  A  L + M   G+  +   Y SL + 
Sbjct: 761 GELTKAFELRDDMMRRGVKPNRATYNSLIHG 791



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 113/379 (29%), Positives = 183/379 (48%), Gaps = 11/379 (2%)

Query: 134 SWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQ 193
           S L+  +  L   +    +FD+M  + L P++   T L++   K+      +++Y +M  
Sbjct: 429 SSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTG 488

Query: 194 LGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYE 253
            G+  N + +  LI   C ++ + +  KL  EM   +V  +  TYN LI  +CK+G    
Sbjct: 489 KGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVR 548

Query: 254 ALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD----------IKGATPNH 303
           A  + D M  +G+ PD  TY  LI G C  GR+ EAR    D          I+G  PN 
Sbjct: 549 AFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNV 608

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
           VTYT LI+G C+   +++A  L   M A    P   TY   L  L  EG I  A +L + 
Sbjct: 609 VTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDV 668

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
           + E  +A + VT N LI  +CK+G    A +V   M+++G+  D  +Y  +I+ +C+  +
Sbjct: 669 LLEGFLA-NTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGD 727

Query: 424 MDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRA 483
           +  A +L   ML+ G +P   +Y++L+ G C         +L D+ + RG+  + + Y +
Sbjct: 728 LKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNS 787

Query: 484 LIRRFCKKEKVDYAQRLFN 502
           LI   C    V      F+
Sbjct: 788 LIHGTCLMSSVSSTADYFS 806



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 104/336 (30%), Positives = 170/336 (50%), Gaps = 11/336 (3%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N  + + L+  Y       +  +++ +M    + P+ +  T L++ L          K++
Sbjct: 459 NVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLF 518

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
            +MV+  V+ N   YNVLI   CK  +  +  +LL EM  K +  D +TY  LI+  C  
Sbjct: 519 GEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCST 578

Query: 249 GMHYEALAVQDRM--------EREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KG 298
           G   EA    + +        E EG  P++VTY +LI+G C+ G M +A  L R++    
Sbjct: 579 GRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASN 638

Query: 299 ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDAN 358
           + PN  TY   +D      ++E+A++L +V+  +G     VTYN ++R  CK GRI++A 
Sbjct: 639 SLPNQNTYACFLDYLTSEGNIEKAIQLHDVL-LEGFLANTVTYNILIRGFCKLGRIQEAA 697

Query: 359 RLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGF 418
            +L  M +  I+PD ++ +T+I  YC+ GD   A+K+   ML  G+  D   Y  LI+G 
Sbjct: 698 EVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGC 757

Query: 419 CKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYC 454
           C   E+  A EL   M+  G  P+  +Y+ L+ G C
Sbjct: 758 CVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTC 793



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/290 (24%), Positives = 119/290 (41%), Gaps = 35/290 (12%)

Query: 306 YTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMN 365
           +  LI  Y +     + L +  +M   G+ P + T + +L  L +  + R A  L +E+ 
Sbjct: 148 FDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIV 207

Query: 366 EKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIH--------- 416
              + PD      ++ + C++ D   A +V  RM  +G  L   TY   I          
Sbjct: 208 SSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVW 267

Query: 417 --------------------------GFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLV 450
                                     G CK +E +  +E++  M++ GF PS  + S LV
Sbjct: 268 EAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLV 327

Query: 451 DGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGIL 510
           DG   K N  +   L+++    G+   + VY ALI   CK  K+D A+ LFN M   G+ 
Sbjct: 328 DGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLF 387

Query: 511 GDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAK 560
            + V Y+ L  ++ + G+       L  M    +  T+  Y S  + + K
Sbjct: 388 PNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCK 437


>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12300, mitochondrial; Flags: Precursor
 gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
 gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 637

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 118/390 (30%), Positives = 194/390 (49%), Gaps = 4/390 (1%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           S +  ++K+  +P  N+   S L+          + L++ D+M      P L     L+N
Sbjct: 144 SAMGKIIKLGYEP--NTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVN 201

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
            L           +  KMV+ G   N   Y  +++  CKS       +LL +ME ++++ 
Sbjct: 202 GLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKL 261

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           D   Y+ +I   CK G    A  + + ME +GI+ +I+TYN LI GFC  GR  +  +L 
Sbjct: 262 DAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLL 321

Query: 294 RDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
           RD+  +   PN VT++ LID + +   L EA  L + M  +G+ P  +TY S++   CKE
Sbjct: 322 RDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKE 381

Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
             +  AN++++ M  K   P+  T N LIN YCK       +++  +M   G++ D  TY
Sbjct: 382 NHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTY 441

Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
             LI GFC+  ++++AKEL   M+     P+  +Y  L+DG C+    E  L++ ++   
Sbjct: 442 NTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEK 501

Query: 472 RGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
             + +D+ +Y  +I   C   KVD A  LF
Sbjct: 502 SKMELDIGIYNIIIHGMCNASKVDDAWDLF 531



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 126/454 (27%), Positives = 219/454 (48%), Gaps = 5/454 (1%)

Query: 122 IHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLT 181
           IH  P       S L    A  K     L +  QM +  +  +L+  ++++N   + R  
Sbjct: 80  IHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKL 139

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
            + +    K+++LG   N   ++ LI+  C    V +  +L+  M     + DL T NTL
Sbjct: 140 CLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTL 199

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGA 299
           +   C  G   EA+ + D+M   G  P+ VTY  +++  C+ G+   A  L R +  +  
Sbjct: 200 VNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNI 259

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
             + V Y+ +IDG C+   L+ A  L   M  KG+   ++TYN ++   C  GR  D  +
Sbjct: 260 KLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAK 319

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
           LL +M ++KI P+ VT + LI+++ K G    A ++   M+  G+  D  TY +LI GFC
Sbjct: 320 LLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFC 379

Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
           K   +D A +++  M+  G  P+  +++ L++GYC  N  +  L+L  +   RG+  D  
Sbjct: 380 KENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTV 439

Query: 480 VYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
            Y  LI+ FC+  K++ A+ LF  M    +  + V Y  L       GE +   +I + +
Sbjct: 440 TYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKI 499

Query: 540 YRRRLMITLKIYRSF---SASYAKDNEILDLFWS 570
            + ++ + + IY        + +K ++  DLF S
Sbjct: 500 EKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCS 533



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 109/396 (27%), Positives = 199/396 (50%), Gaps = 2/396 (0%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           + + + D+M  +   P+      +LN + K   T +  ++ +KM +  +  +   Y+++I
Sbjct: 211 EAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
              CK   +D    L  EME K +  ++ TYN LI  +C  G   +   +   M +  I+
Sbjct: 271 DGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKIN 330

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
           P++VT++ LI  F +EG++REA  L +++  +G  P+ +TYT+LIDG+C+ N L++A ++
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQM 390

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
            ++M +KG  P + T+N ++   CK  RI D   L  +M+ + +  D VT NTLI  +C+
Sbjct: 391 VDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCE 450

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
           +G    A ++   M+   +  +  TYK L+ G C   E + A E+   +  +        
Sbjct: 451 LGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGI 510

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+ ++ G CN +  +    L      +G+   V  Y  +I   CKK  +  A+ LF  M+
Sbjct: 511 YNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKME 570

Query: 506 GNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
            +G   D   Y  L  A+   G+      +++++ R
Sbjct: 571 EDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKR 606



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 111/427 (25%), Positives = 196/427 (45%), Gaps = 40/427 (9%)

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
           D    +++ M+    +  +  ++ L  A  K+   D V  L  +ME K +  +L+T + +
Sbjct: 70  DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIM 129

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGA 299
           I  +C+      A +   ++ + G  P+ +T+++LI+G C EGR+ EA  L   +   G 
Sbjct: 130 INCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGH 189

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
            P+ +T  TL++G C +    EA+ L + M   G  P  VTY  +L  +CK G+   A  
Sbjct: 190 KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAME 249

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
           LL +M E+ I  D V  + +I+  CK G   +A  + N M   G+  +  TY  LI GFC
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFC 309

Query: 420 KAKEMD-----------------------------------IAKELLFGMLDAGFSPSYC 444
            A   D                                    A+EL   M+  G +P   
Sbjct: 310 NAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTI 369

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
           +Y+ L+DG+C +N+ +   +++D  VS+G   ++  +  LI  +CK  ++D    LF  M
Sbjct: 370 TYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKM 429

Query: 505 QGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL---MITLKIYRSFSASYAKD 561
              G++ D+V Y +L   +   G+     ++  +M  R++   ++T KI         + 
Sbjct: 430 SLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGES 489

Query: 562 NEILDLF 568
            + L++F
Sbjct: 490 EKALEIF 496



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 100/377 (26%), Positives = 180/377 (47%), Gaps = 37/377 (9%)

Query: 146 TQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNV 205
           T   +++  +M   N+       +++++ L K    D  + ++ +M   G+  NI  YN+
Sbjct: 244 TALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNI 303

Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
           LI   C +   D   KLL +M  + +  ++ T++ LI  + K+G   EA  +   M   G
Sbjct: 304 LIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRG 363

Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEAL 323
           I+PD +TY SLI GFC+E  + +A ++   +  KG  PN  T+  LI+GYC+AN +++ L
Sbjct: 364 IAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGL 423

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
            L   M+ +GV    VTYN++++  C+ G++  A  L  EM  +K+ P+ VT   L++  
Sbjct: 424 ELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGL 483

Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQF---------------------------------- 409
           C  G++  A+++  ++ ++ + LD                                    
Sbjct: 484 CDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGV 543

Query: 410 -TYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
            TY  +I G CK   +  A+ L   M + G +P   +Y+ L+  +    +    +KL++E
Sbjct: 544 KTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEE 603

Query: 469 FVSRGLCVDVSVYRALI 485
               G  VD S  + +I
Sbjct: 604 LKRCGFSVDASTIKMVI 620



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 92/317 (29%), Positives = 148/317 (46%), Gaps = 37/317 (11%)

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           L+  + N     DG ++   M    + P++   +VL++S  K+       +++K+M+  G
Sbjct: 304 LIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRG 363

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
           +  +   Y  LI   CK + +DK  +++  M  K    ++ T+N LI  YCK     + L
Sbjct: 364 IAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGL 423

Query: 256 AVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGY 313
            +  +M   G+  D VTYN+LI GFC  G++  A+ LF+++  +   PN VTY  L+DG 
Sbjct: 424 ELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGL 483

Query: 314 CRANDLEEALRLRE-----------------------------------VMAAKGVYPGV 338
           C   + E+AL + E                                    +  KGV PGV
Sbjct: 484 CDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGV 543

Query: 339 VTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNR 398
            TYN ++  LCK+G + +A  L  +M E   APD  T N LI A+   GD   ++K+   
Sbjct: 544 KTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEE 603

Query: 399 MLEAGLMLDQFTYKALI 415
           +   G  +D  T K +I
Sbjct: 604 LKRCGFSVDASTIKMVI 620



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 106/244 (43%), Gaps = 38/244 (15%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           Q+ D M      P++    +L+N   K    D   ++++KM   GVVA+   YN LI   
Sbjct: 389 QMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGF 448

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER------- 263
           C+   ++  ++L  EM  + V  ++ TY  L+   C  G   +AL + +++E+       
Sbjct: 449 CELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDI 508

Query: 264 ----------------------------EGISPDIVTYNSLIHGFCREGRMREARRLFRD 295
                                       +G+ P + TYN +I G C++G + EA  LFR 
Sbjct: 509 GIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRK 568

Query: 296 IK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGR 353
           ++  G  P+  TY  LI  +    D  ++++L E +   G      T   ++  L  +GR
Sbjct: 569 MEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDML-SDGR 627

Query: 354 IRDA 357
           ++ +
Sbjct: 628 LKKS 631



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/206 (20%), Positives = 89/206 (43%)

Query: 339 VTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNR 398
           ++Y   LR    + +  DA  L  +M   +  P  +  + L +A  K       + +  +
Sbjct: 54  LSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQ 113

Query: 399 MLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNN 458
           M   G+  + +T   +I+ FC+ +++ +A   +  ++  G+ P+  ++S L++G C +  
Sbjct: 114 MELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGR 173

Query: 459 EEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTS 518
               L+L+D  V  G   D+     L+   C   K   A  L + M   G   ++V Y  
Sbjct: 174 VSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGP 233

Query: 519 LAYAYWRAGEPKACSDILDDMYRRRL 544
           +     ++G+     ++L  M  R +
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNI 259


>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 794

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 125/467 (26%), Positives = 219/467 (46%), Gaps = 42/467 (8%)

Query: 146 TQDGLQVFDQMR--VHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLY 203
           +Q+ L++   M     +  P + + T ++N   K+   D  +  Y +M+  G++ N+  Y
Sbjct: 178 SQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTY 237

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER 263
           + +I A CK+  +DK  ++L  M    V  +  TYN+++  YC  G   EA+    +M  
Sbjct: 238 SSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHS 297

Query: 264 EGISPDIVTYNSLIHGFCREGRMREARRLF-----RDIK--------------------- 297
           +G+ PD+VTYNSL+   C+ GR  EAR++F     R +K                     
Sbjct: 298 DGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVE 357

Query: 298 -----------GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILR 346
                      G  PNH  ++ LI  Y +   +++A+ +   M  +G+ P  VTY +++ 
Sbjct: 358 MHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIG 417

Query: 347 KLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLML 406
            LCK GR+ DA R   +M +++++P N+  N+LI++ C       A ++   ML+ G+ L
Sbjct: 418 ILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICL 477

Query: 407 DQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLL 466
           D   + ++I   CK   +  +++L   M+  G  P   +YS L+DGYC     +   KLL
Sbjct: 478 DTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLL 537

Query: 467 DEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRA 526
              VS G+  D   Y  LI  +CK  +++ A  LF  M+ +G+  D + Y  +    ++ 
Sbjct: 538 ASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQT 597

Query: 527 GEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDN---EILDLFWS 570
               A  ++   +      + L  Y        K+N   E L +F +
Sbjct: 598 RRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQN 644



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 123/440 (27%), Positives = 205/440 (46%), Gaps = 40/440 (9%)

Query: 167 ACTVLLNSLAKD-RLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCE 225
           A T LL  L  D R +D +  V ++M QLG + N+  YN+L+   C  +   +  +LL  
Sbjct: 128 AFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQM 187

Query: 226 M--EFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCRE 283
           M  +  D   D+ +Y T+I  + K+G   +A      M   GI P++VTY+S+I   C+ 
Sbjct: 188 MPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKA 247

Query: 284 GRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTY 341
             M +A  +   +   G  PN  TY +++ GYC +   +EA+   + M + GV P VVTY
Sbjct: 248 QAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTY 307

Query: 342 NSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN-------------------- 381
           NS++  LCK GR  +A ++ + M ++ + P+  T  TL+                     
Sbjct: 308 NSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVR 367

Query: 382 ---------------AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
                          AY K G    AM V ++M + GL  D  TY  +I   CK+  ++ 
Sbjct: 368 NGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVED 427

Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
           A      M+D   SP    Y+ L+   C  +  +   +L+ E + RG+C+D   + ++I 
Sbjct: 428 AMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIID 487

Query: 487 RFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMI 546
             CK+ +V  +++LF+LM   G+  D + Y++L   Y  AG+    + +L  M    +  
Sbjct: 488 SHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKP 547

Query: 547 TLKIYRSFSASYAKDNEILD 566
               Y +    Y K + + D
Sbjct: 548 DCVTYNTLINGYCKISRMED 567



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 105/373 (28%), Positives = 188/373 (50%), Gaps = 4/373 (1%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLA-KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           ++FD M    L P +     LL   A K  L +M   +   MV+ G+  N +++++LI A
Sbjct: 325 KMFDSMTKRGLKPEITTYGTLLQGYATKGALVEM-HGLLDLMVRNGIHPNHYVFSILICA 383

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
             K   VD+   +  +M  + +  D  TY T+I + CK G   +A+   ++M  E +SP 
Sbjct: 384 YAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPG 443

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLRE 327
            + YNSLIH  C   +  +A+ L  ++  +G   + + + ++ID +C+   + E+ +L +
Sbjct: 444 NIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFD 503

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
           +M   GV P ++TY++++   C  G++ +A +LL  M    + PD VT NTLIN YCKI 
Sbjct: 504 LMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKIS 563

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
               A+ +   M  +G+  D  TY  ++ G  + +    AKEL  G+ ++G      +Y+
Sbjct: 564 RMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYN 623

Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGN 507
            ++ G C  N  +  L++        L ++   +  +I    K  + D A+ LF  +  N
Sbjct: 624 IILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSAN 683

Query: 508 GILGDSVIYTSLA 520
           G++ D   Y+ +A
Sbjct: 684 GLVPDVRTYSLMA 696



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 123/448 (27%), Positives = 206/448 (45%), Gaps = 13/448 (2%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG---VVANIHLY 203
           +D   VFD++        ++     L  +A+      V + Y +M + G   V  N+  Y
Sbjct: 36  EDARHVFDELLRRGRGASIYGLNCALADVARHSPAAAVSR-YNRMARAGADEVTPNLCTY 94

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL-AVQDRME 262
            +LI +CC +  +D     L  +  K  R D   +  L+   C      +A+  V  RM 
Sbjct: 95  GILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 154

Query: 263 REGISPDIVTYNSLIHGFCREGRMREARRLFR----DIKGATPNHVTYTTLIDGYCRAND 318
           + G  P++ +YN L+ G C E R +EA  L +    D     P+ V+YTT+I+G+ +  D
Sbjct: 155 QLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGD 214

Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT 378
           L++A      M  +G+ P VVTY+SI+  LCK   +  A  +L  M +  + P+  T N+
Sbjct: 215 LDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNS 274

Query: 379 LINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAG 438
           +++ YC  G    A+    +M   G+  D  TY +L+   CK      A+++   M   G
Sbjct: 275 IVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRG 334

Query: 439 FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQ 498
             P   +Y  L+ GY  K     +  LLD  V  G+  +  V+  LI  + K+ KVD A 
Sbjct: 335 LKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAM 394

Query: 499 RLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSAS- 557
            +F+ M+  G+  D+V Y ++     ++G  +      + M   RL     +Y S   S 
Sbjct: 395 LVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSL 454

Query: 558 --YAKDNEILDLFWSHVVDRGLMSKHIF 583
             + K ++  +L    ++DRG+    IF
Sbjct: 455 CIFDKWDKAKELIL-EMLDRGICLDTIF 481



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 123/461 (26%), Positives = 211/461 (45%), Gaps = 22/461 (4%)

Query: 57  PSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLE---KIALRDFLSTP 113
           P  +  F K   S     +  + ++ +++  L KN     A+ M +   K  L+  ++T 
Sbjct: 285 PKEAIGFLKKMHS--DGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTY 342

Query: 114 SVL-------NALVKIHDDPD--------GNSHVLSWLVIFYANLKMTQDGLQVFDQMRV 158
             L        ALV++H   D         N +V S L+  YA        + VF +MR 
Sbjct: 343 GTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQ 402

Query: 159 HNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDK 218
             L P       ++  L K    +   + +++M+   +     +YN LIH+ C     DK
Sbjct: 403 QGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDK 462

Query: 219 VEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIH 278
            ++L+ EM  + +  D   +N++I  +CK+G   E+  + D M R G+ PDI+TY++LI 
Sbjct: 463 AKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLID 522

Query: 279 GFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYP 336
           G+C  G+M EA +L   +   G  P+ VTY TLI+GYC+ + +E+AL L   M + GV P
Sbjct: 523 GYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSP 582

Query: 337 GVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVK 396
            ++TYN IL+ L +  R   A  L   + E     +  T N +++  CK   T  A+++ 
Sbjct: 583 DIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMF 642

Query: 397 NRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNK 456
             +    L L+  T+  +I    K    D AK+L   +   G  P   +YS + +    +
Sbjct: 643 QNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQ 702

Query: 457 NNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYA 497
              E L  L       G   +  +  +++R+  ++  +  A
Sbjct: 703 GLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRA 743



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 110/443 (24%), Positives = 204/443 (46%), Gaps = 20/443 (4%)

Query: 80  SHWTMIHILTK----NKHFKSAQNMLEKIALRDFLSTPSVLNALVK-------------- 121
           S+ T+I+   K    +K + +   ML++  L + ++  S++ AL K              
Sbjct: 201 SYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSM 260

Query: 122 IHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLT 181
           + +    N    + +V  Y +    ++ +    +M    + P +     L++ L K+   
Sbjct: 261 VKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRC 320

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
               K++  M + G+   I  Y  L+        + ++  LL  M    +  + + ++ L
Sbjct: 321 TEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSIL 380

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGA 299
           I  Y K+G   +A+ V  +M ++G++PD VTY ++I   C+ GR+ +A R F  +  +  
Sbjct: 381 ICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERL 440

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
           +P ++ Y +LI   C  +  ++A  L   M  +G+    + +NSI+   CKEGR+ ++ +
Sbjct: 441 SPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEK 500

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
           L + M    + PD +T +TLI+ YC  G    A K+   M+  G+  D  TY  LI+G+C
Sbjct: 501 LFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYC 560

Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
           K   M+ A  L   M  +G SP   +Y+ ++ G        A  +L       G  +++S
Sbjct: 561 KISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELS 620

Query: 480 VYRALIRRFCKKEKVDYAQRLFN 502
            Y  ++   CK    D A R+F 
Sbjct: 621 TYNIILHGLCKNNLTDEALRMFQ 643



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/268 (26%), Positives = 109/268 (40%), Gaps = 72/268 (26%)

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
           K++  MV++GV  +I  Y+ LI   C +  +D+  KLL  M    ++ D  TYNTLI  Y
Sbjct: 500 KLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGY 559

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNH 303
           CK     +AL +   ME  G+SPDI+TYN ++ G  +  R   A+ L+  I   G     
Sbjct: 560 CKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLEL 619

Query: 304 VTYTTLIDGYCRANDLEEALRLRE-----------------------------------V 328
            TY  ++ G C+ N  +EALR+ +                                    
Sbjct: 620 STYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAA 679

Query: 329 MAAKGVYPGVVTY-----------------------------------NSILRKLCKEGR 353
           ++A G+ P V TY                                   NSI+RKL + G 
Sbjct: 680 LSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGD 739

Query: 354 IRDANRLLNEMNEKKIAPDNVTCNTLIN 381
           I  A   L  ++EK  + +  T +  ++
Sbjct: 740 ITRAGTYLFMIDEKHFSLEASTASLFLD 767


>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
          Length = 558

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 131/431 (30%), Positives = 216/431 (50%), Gaps = 7/431 (1%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMV--WKVYKKMVQLGVVANIHLYN 204
            D + +F  M     +P +     LL+++AK +  D+V    +  KM++LG   +I   +
Sbjct: 24  DDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVTLS 83

Query: 205 VLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMERE 264
            L++  C    +     L+ +M     R D  T+ TLI          EA+A+ DRM + 
Sbjct: 84  SLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQR 143

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIKGA--TPNHVTYTTLIDGYCRANDLEEA 322
           G  P++VTY  +++G C+ G +  A  L   ++ A    + V + T+ID  C+   +++A
Sbjct: 144 GCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDA 203

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
           L L + M  KG+ P VVTY+S++  LC  GR  DA++LL++M EKKI P+ VT N LI+A
Sbjct: 204 LNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDA 263

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           + K G    A K+ + M++  +  D FTY +LI+GFC    +D AK++   M+     P 
Sbjct: 264 FVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPD 323

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ L+ G+C     E   +L  E   RGL  D   Y  LI+        D AQ++F 
Sbjct: 324 LDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFK 383

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDN 562
            M  +G+  D + Y+ L       G+ +   ++ D M +  + + + IY +      K  
Sbjct: 384 QMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAG 443

Query: 563 EI---LDLFWS 570
           ++    DLF S
Sbjct: 444 KVDDGWDLFCS 454



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 128/429 (29%), Positives = 203/429 (47%), Gaps = 4/429 (0%)

Query: 93  HFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQV 152
            F    + + K+   D + + ++L  ++K+  +P  +   LS L+  Y + K   D + +
Sbjct: 44  EFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEP--SIVTLSSLLNGYCHGKRISDAVAL 101

Query: 153 FDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCK 212
            DQM      P     T L++ L           +  +MVQ G   N+  Y V+++  CK
Sbjct: 102 VDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCK 161

Query: 213 SSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVT 272
             D+D    LL +ME   + AD+  +NT+I   CK     +AL +   ME +GI P++VT
Sbjct: 162 RGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVT 221

Query: 273 YNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMA 330
           Y+SLI   C  GR  +A +L  D+  K   PN VT+  LID + +     EA +L + M 
Sbjct: 222 YSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMI 281

Query: 331 AKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTA 390
            + + P + TYNS++   C   R+  A ++   M  K   PD  T NTLI  +CK     
Sbjct: 282 KRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVE 341

Query: 391 SAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLV 450
              ++   M   GL+ D  TY  LI G     + D A+++   M+  G  P   +YS L+
Sbjct: 342 DGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILL 401

Query: 451 DGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGIL 510
           DG CN    E  L++ D      + +D+ +Y  +I   CK  KVD    LF  +   G+ 
Sbjct: 402 DGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVK 461

Query: 511 GDSVIYTSL 519
            + V Y ++
Sbjct: 462 PNVVTYNTM 470



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 116/401 (28%), Positives = 203/401 (50%), Gaps = 2/401 (0%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
            + + + D+M      P+L    V++N L K    D+ + +  KM    + A++ ++N +
Sbjct: 131 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTI 190

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           I + CK   VD    L  EME K +R ++ TY++LI+  C  G   +A  +   M  + I
Sbjct: 191 IDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 250

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
           +P++VT+N+LI  F +EG+  EA +L  D+  +   P+  TY +LI+G+C  + L++A +
Sbjct: 251 NPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQ 310

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           + E M +K  +P + TYN++++  CK  R+ D   L  EM+ + +  D VT  TLI    
Sbjct: 311 MFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLF 370

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
             GD  +A KV  +M+  G+  D  TY  L+ G C   +++ A E+   M  +       
Sbjct: 371 HDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIY 430

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
            Y+ +++G C     +    L      +G+  +V  Y  +I   C K  +  A  L   M
Sbjct: 431 IYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKM 490

Query: 505 QGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
           + +G L DS  Y +L  A+ R G+  A ++++ +M   R +
Sbjct: 491 KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFV 531



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 101/346 (29%), Positives = 174/346 (50%), Gaps = 2/346 (0%)

Query: 170 VLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFK 229
            +++SL K R  D    ++K+M   G+  N+  Y+ LI   C         +LL +M  K
Sbjct: 189 TIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK 248

Query: 230 DVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA 289
            +  +L T+N LI  + K+G   EA  + D M +  I PDI TYNSLI+GFC   R+ +A
Sbjct: 249 KINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKA 308

Query: 290 RRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRK 347
           +++F  +  K   P+  TY TLI G+C++  +E+   L   M+ +G+    VTY ++++ 
Sbjct: 309 KQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQG 368

Query: 348 LCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLD 407
           L  +G   +A ++  +M    + PD +T + L++  C  G    A++V + M ++ + LD
Sbjct: 369 LFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLD 428

Query: 408 QFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLD 467
            + Y  +I G CKA ++D   +L   +   G  P+  +Y+ ++ G C+K   +    LL 
Sbjct: 429 IYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLK 488

Query: 468 EFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDS 513
           +    G   D   Y  LIR   +      +  L   M+    +GD+
Sbjct: 489 KMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDA 534



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 68/233 (29%), Positives = 109/233 (46%), Gaps = 2/233 (0%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           Q+F+ M   +  P L     L+    K +  +   +++++M   G+V +   Y  LI   
Sbjct: 310 QMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL 369

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
               D D  +K+  +M    V  D+ TY+ L+   C  G   +AL V D M++  I  DI
Sbjct: 370 FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI 429

Query: 271 VTYNSLIHGFCREGRMREARRLF--RDIKGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
             Y ++I G C+ G++ +   LF    +KG  PN VTY T+I G C    L+EA  L + 
Sbjct: 430 YIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKK 489

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
           M   G  P   TYN+++R   ++G    +  L+ EM   +   D  T   + N
Sbjct: 490 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVAN 542


>gi|255549371|ref|XP_002515739.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545176|gb|EEF46686.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 613

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 148/561 (26%), Positives = 273/561 (48%), Gaps = 14/561 (2%)

Query: 17  ISAIMLKGHWAKL-LNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCA-FFKWAE--SAVP 72
           I+ I++K     L    ++ S+L S   + VL N     ++P+ SC  FFK  +   ++ 
Sbjct: 30  ITKILIKSGLKPLETKSSLLSNLDSYTTNLVLSN----PNLPTRSCLNFFKCLQKNQSLI 85

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFL--STPSVLNALVKIHDDPDGNS 130
            +K  L++H  +I  L K + F   +N+L   A+   L  S    ++ +     +P    
Sbjct: 86  CHKPDLRAHVILISRLFKARKFVVMKNVLTCYAMDKNLRCSVSDFVSLIDNRFHEPKFVE 145

Query: 131 HVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKK 190
            +   L   Y +  M ++G +VFD M  + L     +C V L +L +     M    +KK
Sbjct: 146 KLCDMLFRVYVDNSMFEEGFKVFDYMVHNGLKIDDRSCIVCLLALKRSDQMVMSLGFFKK 205

Query: 191 MVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGM 250
           MV+  V   ++   ++I   CK   V++ + L+ EM  K ++ ++ TYNTL+  Y K  M
Sbjct: 206 MVEFKVDVTVYSMTIVIDGLCKKGRVERAKDLMLEMTGKGIKPNVVTYNTLVNAYIKI-M 264

Query: 251 HYEALAVQDR-MEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYT 307
            +E +    R ME + +  +  TY  LI  +   G++ EA ++F  +  +G   +   +T
Sbjct: 265 DFEGVNEMLRLMEMDKVVYNAATYTLLIEWYGSSGKIAEAEKVFEKMLERGVEADIHVFT 324

Query: 308 TLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEK 367
           ++I   C+  +++ A  L + +  +G+     TY +++   C  G++  A  L+NEM  +
Sbjct: 325 SIISWQCKLGNMKRAFALFDELNERGLVANAHTYGALIHGTCNSGQLDAAEMLVNEMQSQ 384

Query: 368 KIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIA 427
            +  + V  NTLIN YCK G    A+++++ M + G   D FTY  +  G CK    + A
Sbjct: 385 GLDMNLVIFNTLINGYCKKGMIDEALRMQDVMEKKGFENDIFTYNTIAGGLCKLNRHEEA 444

Query: 428 KELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRR 487
           K  LF M++ G  P+  S++ ++D +C + N     ++  +   +G   +V  Y  LI  
Sbjct: 445 KRWLFTMVEKGVDPNAVSFTIMIDIHCKEGNLVEAERVFQDMKKKGEKPNVVTYNTLIDG 504

Query: 488 FCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMIT 547
           + KK K+  A RL + M+  G+  D   YT+L +     G+ +    +L+++ R+ L I+
Sbjct: 505 YSKKGKLKEAYRLKDEMESIGMTSDIYTYTTLVHGECVFGKVEEALTLLNEVCRKGLAIS 564

Query: 548 LKIYRSFSASYAKDNEILDLF 568
           +  Y +  +  +K+    + F
Sbjct: 565 IVTYTAIISGLSKEGRSEEAF 585



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 99/303 (32%), Positives = 166/303 (54%), Gaps = 4/303 (1%)

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
           KV++KM++ GV A+IH++  +I   CK  ++ +   L  E+  + + A+  TY  LI   
Sbjct: 306 KVFEKMLERGVEADIHVFTSIISWQCKLGNMKRAFALFDELNERGLVANAHTYGALIHGT 365

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI---KGATPN 302
           C  G    A  + + M+ +G+  ++V +N+LI+G+C++G + EA R+ +D+   KG   +
Sbjct: 366 CNSGQLDAAEMLVNEMQSQGLDMNLVIFNTLINGYCKKGMIDEALRM-QDVMEKKGFEND 424

Query: 303 HVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLN 362
             TY T+  G C+ N  EEA R    M  KGV P  V++  ++   CKEG + +A R+  
Sbjct: 425 IFTYNTIAGGLCKLNRHEEAKRWLFTMVEKGVDPNAVSFTIMIDIHCKEGNLVEAERVFQ 484

Query: 363 EMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAK 422
           +M +K   P+ VT NTLI+ Y K G    A ++K+ M   G+  D +TY  L+HG C   
Sbjct: 485 DMKKKGEKPNVVTYNTLIDGYSKKGKLKEAYRLKDEMESIGMTSDIYTYTTLVHGECVFG 544

Query: 423 EMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYR 482
           +++ A  LL  +   G + S  +Y+ ++ G   +   E   +L DE ++ GL  D  VY 
Sbjct: 545 KVEEALTLLNEVCRKGLAISIVTYTAIISGLSKEGRSEEAFRLYDEMMAAGLTPDDRVYT 604

Query: 483 ALI 485
           +L+
Sbjct: 605 SLV 607



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/127 (25%), Positives = 62/127 (48%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           +VF  M+     P++     L++  +K       +++  +M  +G+ ++I+ Y  L+H  
Sbjct: 481 RVFQDMKKKGEKPNVVTYNTLIDGYSKKGKLKEAYRLKDEMESIGMTSDIYTYTTLVHGE 540

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           C    V++   LL E+  K +   + TY  +I+   K+G   EA  + D M   G++PD 
Sbjct: 541 CVFGKVEEALTLLNEVCRKGLAISIVTYTAIISGLSKEGRSEEAFRLYDEMMAAGLTPDD 600

Query: 271 VTYNSLI 277
             Y SL+
Sbjct: 601 RVYTSLV 607


>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
          Length = 572

 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 116/375 (30%), Positives = 189/375 (50%), Gaps = 2/375 (0%)

Query: 170 VLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFK 229
           ++++SL KD +T     ++ +M+  G++ ++ +Y+ L+   C+   + +  +   EME +
Sbjct: 151 MIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGR 210

Query: 230 DVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA 289
            + AD++TYN+LI    + G+  E     + M   G SPD  T+  LI G C+EG++ EA
Sbjct: 211 GISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEA 270

Query: 290 RRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRK 347
           +++   +  KG  P+ +TY TL++G C    LE+A +L E +A +G+   V +YN ++  
Sbjct: 271 QQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILING 330

Query: 348 LCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLD 407
            CK+ +I +A RL  EM  K + P  VT NTLI A C+ G   +A K+   M   G  L 
Sbjct: 331 YCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLK 390

Query: 408 QFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLD 467
             TY  L+ G CK   ++ A +L   +      P+   +S L+DG C     E   K  D
Sbjct: 391 LSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFD 450

Query: 468 EFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
           E    GL  D   Y  LI   C K  +  A +L   M+  G L DS+ +  +     +  
Sbjct: 451 EISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKEN 510

Query: 528 EPKACSDILDDMYRR 542
           E      +L++M  R
Sbjct: 511 EIHEAIQLLEEMRNR 525



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 109/361 (30%), Positives = 184/361 (50%), Gaps = 3/361 (0%)

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
           +++ +M + G+  +   Y +LI+  CK+       KL  +M+  + + D+FTY  +I   
Sbjct: 98  QLFDEMTEKGLFGDAKTYGILINGLCKARKTGLAIKLHEKMK-GNCKGDVFTYGMIIDSL 156

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNH 303
           CK GM  EAL +   M   GI PD+V Y+SL+ G CR GR++EA   F+++  +G + + 
Sbjct: 157 CKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADV 216

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
            TY +LI G  RA   +E      +M  +G  P   T+  ++  LCKEG++ +A ++L  
Sbjct: 217 YTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILEL 276

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
           M+ K   PD +T NTL+N  C +G    A K+   + + G+ L+ F+Y  LI+G+CK ++
Sbjct: 277 MHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQK 336

Query: 424 MDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRA 483
           +D A  L   M   G  PS  +Y+ L+   C         KL  E  + G  + +S Y  
Sbjct: 337 IDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCV 396

Query: 484 LIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRR 543
           L+   CK   ++ A  LF  ++      +  +++ L     RAG+ +      D++ +  
Sbjct: 397 LLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNG 456

Query: 544 L 544
           L
Sbjct: 457 L 457



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 103/347 (29%), Positives = 166/347 (47%), Gaps = 6/347 (1%)

Query: 229 KDVRADLFTYNTLI-ALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMR 287
           +    D  T  TL+  ++ + G+  +A+ + D M  +G+  D  TY  LI+G C+  +  
Sbjct: 71  RGFEPDAVTVTTLVKGVWMENGIP-DAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTG 129

Query: 288 EARRLFRDIKGATPNHV-TYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILR 346
            A +L   +KG     V TY  +ID  C+     EAL +   M   G+ P VV Y+S++ 
Sbjct: 130 LAIKLHEKMKGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMD 189

Query: 347 KLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLML 406
            LC+ GR+++A     EM  + I+ D  T N+LI+   + G         N M++ G   
Sbjct: 190 GLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSP 249

Query: 407 DQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLL 466
           D FT+  LI G CK  ++  A+++L  M   G  P   +Y+ L++G C     E   KL 
Sbjct: 250 DAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLF 309

Query: 467 DEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRA 526
           +    RG+ ++V  Y  LI  +CK +K+D A RLF  M+  G+   +V Y +L  A  ++
Sbjct: 310 ESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQS 369

Query: 527 GEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDN---EILDLFWS 570
           G  +    +  +M      + L  Y        K+    E +DLF S
Sbjct: 370 GRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQS 416



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 103/407 (25%), Positives = 186/407 (45%), Gaps = 41/407 (10%)

Query: 120 VKIHDDPDGN--SHVLSWLVIFYANLK--MTQDGLQVFDQMRVHNLMPHLHACTVLLNSL 175
           +K+H+   GN    V ++ +I  +  K  MT + L +F +M    ++P +   + L++ L
Sbjct: 132 IKLHEKMKGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGL 191

Query: 176 AKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC------------------------- 210
            +        + +K+M   G+ A+++ YN LIH                           
Sbjct: 192 CRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDA 251

Query: 211 ----------CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDR 260
                     CK   V + +++L  M  K    D+ TYNTL+   C  G   +A  + + 
Sbjct: 252 FTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFES 311

Query: 261 MEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRAND 318
           +   GI  ++ +YN LI+G+C++ ++ EA RLF ++  KG  P+ VTY TLI   C++  
Sbjct: 312 LADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGR 371

Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT 378
           +  A +L   M   G +  + TY  +L  LCK G + +A  L   + + +  P+    + 
Sbjct: 372 VRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSI 431

Query: 379 LINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAG 438
           L++  C+ G    A K  + + + GL  D   Y  LI+G C    +  A +LL+ M + G
Sbjct: 432 LLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKG 491

Query: 439 FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
             P   +++ ++     +N     ++LL+E  +R    D +V   L+
Sbjct: 492 CLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 538



 Score = 38.9 bits (89), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 49/221 (22%), Positives = 91/221 (41%), Gaps = 24/221 (10%)

Query: 44  HKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNM-LE 102
           + +L+N Y  C    +  AF  + E      K S  ++ T+I  L ++   ++AQ + +E
Sbjct: 324 YNILINGY--CKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVE 381

Query: 103 KIALRDFL--STPSVL-----------------NALVKIHDDPDGNSHVLSWLVIFYANL 143
                 FL  ST  VL                  ++ K    P  N  V S L+      
Sbjct: 382 MQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKP--NIEVFSILLDGMCRA 439

Query: 144 KMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLY 203
              ++  + FD++  + L P   A  +L+N L    +     K+  +M + G + +   +
Sbjct: 440 GKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITF 499

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIAL 244
           NV+I    K +++ +  +LL EM  ++   D    + L+ L
Sbjct: 500 NVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLLCL 540


>gi|242084770|ref|XP_002442810.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
 gi|241943503|gb|EES16648.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
          Length = 722

 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 157/590 (26%), Positives = 239/590 (40%), Gaps = 88/590 (14%)

Query: 38  LTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSA 97
           L +  +H  L  L      P L+   F+WAE+    +  S  +   ++  L +  H ++A
Sbjct: 72  LATGDVHSALRGL------PGLARQLFRWAETTPCGFPRSASAFAAVLVPLARANHIRAA 125

Query: 98  QNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDG-------- 149
             +  +      L     L     +   P     +L  L   Y+     +D         
Sbjct: 126 YPVSLRALHLGLLLPLVSLLLSAPLSPAPQSLLSLLLRLSTKYSKECTDRDATPDTCSTL 185

Query: 150 -LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIH 208
            L  F +M  H + P +  C  +L  L+     D +  V+ +M+QLG+  +I  YN L+ 
Sbjct: 186 CLSAFHEMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLD 245

Query: 209 ACCKSSDVDKVEKLLCEMEFK-------DV-----------------------------R 232
           +  K    DKV  LL EME +       DV                             +
Sbjct: 246 SFLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMRLSKK 305

Query: 233 ADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI-------------------------- 266
           A  FTYN LI     KG   +A  +Q  ME EGI                          
Sbjct: 306 ASSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVK 365

Query: 267 ---------SPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCR 315
                     PD++TYNSL++G+C+ G ++EA  LF D++  G  P  +TY  LIDGYCR
Sbjct: 366 FVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCR 425

Query: 316 ANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVT 375
             DLEEA RL+E M  +G  P V TY  +++       +  A    +EM  K + PD   
Sbjct: 426 LGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFA 485

Query: 376 CNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGML 435
            NT I A   +G  A A +++  M+  G+  D  TY  LI G CK   ++ AK+L   M+
Sbjct: 486 YNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMV 545

Query: 436 DAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVD 495
             G  P   +Y+ L+  +C +       K   + +S GL      Y   I  +C++  + 
Sbjct: 546 HNGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLY 605

Query: 496 YAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
            A   F  M   G+  + + Y  L +A  R G  +       +M  R L+
Sbjct: 606 SAYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLERGLV 655



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 110/367 (29%), Positives = 167/367 (45%), Gaps = 37/367 (10%)

Query: 190 KMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKG 249
           +M   G++  +  YN +IH   +S  V+  +    EM    ++ D+ TYN+L+  YCK G
Sbjct: 333 EMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAG 392

Query: 250 MHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYT 307
              EAL +   +   G++P ++TYN LI G+CR G + EARRL  ++  +G  P+  TYT
Sbjct: 393 SLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYT 452

Query: 308 TLIDGYCRANDLE-----------------------------------EALRLREVMAAK 332
            L+ G   A  L                                    +A RLREVM  +
Sbjct: 453 ILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLE 512

Query: 333 GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
           G+    VTYN ++  LCK G + DA  L  +M    + PD +T   LI+A+C+ G    A
Sbjct: 513 GISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREA 572

Query: 393 MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
            K    M+  GL     TY   IH +C+   +  A      ML+ G  P+  +Y+ L+  
Sbjct: 573 RKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHA 632

Query: 453 YCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGD 512
            C     +   +   E + RGL  +   Y  LI   CK+   + A R +  M  NGI  D
Sbjct: 633 LCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQNGIHPD 692

Query: 513 SVIYTSL 519
            + + +L
Sbjct: 693 YLTHKAL 699



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 121/434 (27%), Positives = 196/434 (45%), Gaps = 31/434 (7%)

Query: 80  SHWTMIHILTKNKHFKSAQNMLEKIALR----DFLSTPSVLNAL----VKIHDDPD---G 128
           +H  +I  L +    + A  M+E + L      F   P +   L    VK  DD      
Sbjct: 276 THNVVITGLARKGDLEEAAEMVEGMRLSKKASSFTYNPLITGLLAKGFVKKADDLQLEME 335

Query: 129 NSHVLSWLVIFYANLKMTQDGLQV------FDQMRVHNLMPHLHACTVLLNSLAKDRLTD 182
           N  ++  +V + A +       QV      F +MR   L P +     LLN   K     
Sbjct: 336 NEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLK 395

Query: 183 MVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLI 242
               ++  +   G+   +  YN+LI   C+  D+++  +L  EM  +    D+ TY  L+
Sbjct: 396 EALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILM 455

Query: 243 ALYCKKGMHYE---ALAVQ--DRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI- 296
                KG H     A+A +  D M  +G+ PD   YN+ I      G + +A RL R++ 
Sbjct: 456 -----KGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRL-REVM 509

Query: 297 --KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRI 354
             +G + + VTY  LIDG C+  +L +A  L+  M   G+ P  +TY  ++   C+ G +
Sbjct: 510 MLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLL 569

Query: 355 RDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKAL 414
           R+A +   +M    +AP  VT    I+AYC+ G+  SA     +MLE G+  ++ TY  L
Sbjct: 570 REARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVL 629

Query: 415 IHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGL 474
           IH  C+     +A      ML+ G  P+  +Y+ L+DG C + N E  ++   E    G+
Sbjct: 630 IHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQNGI 689

Query: 475 CVDVSVYRALIRRF 488
             D   ++AL + F
Sbjct: 690 HPDYLTHKALFKGF 703


>gi|242094006|ref|XP_002437493.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
 gi|241915716|gb|EER88860.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
          Length = 1039

 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 112/373 (30%), Positives = 193/373 (51%), Gaps = 6/373 (1%)

Query: 169 TVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEF 228
           T+L+  L + R       +   M+Q G   N+H Y +LI   CK   +     LL EM  
Sbjct: 257 TILIQGLCETRCVREALVLLLMMLQDGCSPNLHTYTLLIRGLCKEGRIHDARVLLDEMPR 316

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
           + V   ++TYN +I  YCK G   +AL ++  ME  G +PD  TYNSLIHG C  G+  E
Sbjct: 317 RGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLMEGNGCNPDDWTYNSLIHGLC-GGKPDE 375

Query: 289 ARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILR 346
           A  L      +G +P  +T+T +I+GYC+A  +++ALR++ +M +      +  Y  ++ 
Sbjct: 376 AEELLNGAIARGFSPTVITFTNIINGYCKAEKIDDALRVKSIMISSKCKLDLQAYGVLIS 435

Query: 347 KLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLML 406
            L K+ R+++A   LNE+    ++P+ V   ++I+AYCK+G   +A++V       G   
Sbjct: 436 VLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEGCRP 495

Query: 407 DQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLL 466
           + +TY +LI+G  + +++  A  L+  M + G +P   +Y+ L+ G C K+  +   +L 
Sbjct: 496 NAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLF 555

Query: 467 DEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRA 526
           +     GL  D   Y  L    CK  +   A+  ++ +   G++   V YTSL   + +A
Sbjct: 556 EMMEQNGLTPDEQAYNVLTDALCKSGR---AEEAYSFLVKKGVVLTKVTYTSLVDGFSKA 612

Query: 527 GEPKACSDILDDM 539
           G  +  + +++ M
Sbjct: 613 GNTEFAAALIEKM 625



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 137/486 (28%), Positives = 220/486 (45%), Gaps = 76/486 (15%)

Query: 57  PSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVL 116
           P+ + AFF+W  +  P ++H+  SH  ++ +L + +                    P+  
Sbjct: 70  PATALAFFEWV-ARRPGFRHTAASHAALLQLLARRR-------------------APANY 109

Query: 117 NALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLA 176
           + LV       G +           +++   D +Q   +     L        + L SL 
Sbjct: 110 DKLVVSMISCSGTAE----------DMREAVDAIQAIRRAGGKRLALSPKCYNLALRSLL 159

Query: 177 KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLF 236
           +  +T+ + K+Y ++VQ G++                                    D  
Sbjct: 160 RFDMTEHMGKLYSQLVQEGLLP-----------------------------------DTV 184

Query: 237 TYNTLIALYCKKGMHYEALAVQDR----MEREGISPDIVTYNSLIHGFCREGRMREARRL 292
           TYNT+I  YCK+G    +LA+  R    +   G+  D  T N+L+ G+CR G +R+A  L
Sbjct: 185 TYNTMIMAYCKEG----SLAIAHRYFRLLRESGMEMDTYTCNALLLGYCRTGDLRKACWL 240

Query: 293 F--RDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
                + G   N  +YT LI G C    + EAL L  +M   G  P + TY  ++R LCK
Sbjct: 241 LMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLLMMLQDGCSPNLHTYTLLIRGLCK 300

Query: 351 EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
           EGRI DA  LL+EM  + + P   T N +I+ YCK G    A+ +K  M   G   D +T
Sbjct: 301 EGRIHDARVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLMEGNGCNPDDWT 360

Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFV 470
           Y +LIHG C  K  D A+ELL G +  GFSP+  +++ +++GYC     +  L++    +
Sbjct: 361 YNSLIHGLCGGKP-DEAEELLNGAIARGFSPTVITFTNIINGYCKAEKIDDALRVKSIMI 419

Query: 471 SRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPK 530
           S    +D+  Y  LI    KK ++  A+   N +  NG+  + VIYTS+  AY + G+  
Sbjct: 420 SSKCKLDLQAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVG 479

Query: 531 ACSDIL 536
           A  ++ 
Sbjct: 480 AALEVF 485



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 118/480 (24%), Positives = 217/480 (45%), Gaps = 23/480 (4%)

Query: 77  SLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWL 136
           +L ++  +I  L K      A+ +L+++  R  + +    NA++      DG        
Sbjct: 287 NLHTYTLLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMI------DG-------- 332

Query: 137 VIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGV 196
              Y      +D L +   M  +   P       L++ L   +  D   ++    +  G 
Sbjct: 333 ---YCKSGRLKDALGIKTLMEGNGCNPDDWTYNSLIHGLCGGK-PDEAEELLNGAIARGF 388

Query: 197 VANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALA 256
              +  +  +I+  CK+  +D   ++   M     + DL  Y  LI++  KK    EA  
Sbjct: 389 SPTVITFTNIINGYCKAEKIDDALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKD 448

Query: 257 VQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR--DIKGATPNHVTYTTLIDGYC 314
             + +   G+SP++V Y S+I  +C+ G++  A  +F+  + +G  PN  TY++LI G  
Sbjct: 449 TLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGLI 508

Query: 315 RANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNV 374
           +   L +A+ L   M   G+ PGV+TY ++++  CK+    +A RL   M +  + PD  
Sbjct: 509 QDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQ 568

Query: 375 TCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGM 434
             N L +A CK G    A      +++ G++L + TY +L+ GF KA   + A  L+  M
Sbjct: 569 AYNVLTDALCKSGRAEEAYSF---LVKKGVVLTKVTYTSLVDGFSKAGNTEFAAALIEKM 625

Query: 435 LDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKV 494
           ++ G      +YS L+   C +      L +LD+   RG+  ++  Y  +I    K+ K 
Sbjct: 626 VNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVKGNIVAYTIIISEMIKEGKH 685

Query: 495 DYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSF 554
           D+A+ +FN M  +G    ++ YT    +Y + G  +    ++ +M R  +   +  Y  F
Sbjct: 686 DHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVF 745



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 138/528 (26%), Positives = 214/528 (40%), Gaps = 52/528 (9%)

Query: 28  KLLNPNIASSLTSTAIHKVLLNLYNC-CHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIH 86
           +LLN  IA   + T I     N+ N  C    +  A    +       K  LQ++  +I 
Sbjct: 378 ELLNGAIARGFSPTVI--TFTNIINGYCKAEKIDDALRVKSIMISSKCKLDLQAYGVLIS 435

Query: 87  ILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMT 146
           +L K    K A++ L +I       +P+V+               + + ++  Y  +   
Sbjct: 436 VLIKKHRLKEAKDTLNEIFANGL--SPNVV---------------IYTSIIDAYCKVGKV 478

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
              L+VF         P+    + L+  L +D+       +  KM + G+   +  Y  L
Sbjct: 479 GAALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTL 538

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           I   CK  + D   +L   ME   +  D   YN L    CK G   EA +    + ++G+
Sbjct: 539 IQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSF---LVKKGV 595

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
               VTY SL+ GF + G    A  L   +  +G   +  TY+ L+   C+   L EAL 
Sbjct: 596 VLTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALS 655

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           + + M  +GV   +V Y  I+ ++ KEG+   A  + NEM      P  +T    I++YC
Sbjct: 656 ILDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSYC 715

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           KIG    A  +   M   G+  D  TY   I+G      MD A   L  M+DA   P+Y 
Sbjct: 716 KIGRIEEAGHLIGEMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRMIDASCEPNYW 775

Query: 445 SYSWLV-----------------DGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRR 487
           +Y WL+                  G  N    + + +LL+  V  GL      Y ++I  
Sbjct: 776 TY-WLLLKHFLKMSLANAHYVDTSGMWNWIKLDTVWQLLERMVKHGLNPTAVTYSSIIAG 834

Query: 488 FCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDI 535
           FCK  +++ A  L + M G  I  +  IYT L          K C DI
Sbjct: 835 FCKATRLEEACVLLDHMLGKDISPNEEIYTMLI---------KCCCDI 873



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 94/334 (28%), Positives = 144/334 (43%), Gaps = 18/334 (5%)

Query: 166 HACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCE 225
           H  +VLL +L K +  +    +  +M   GV  NI  Y ++I    K    D  + +  E
Sbjct: 635 HTYSVLLQALCKQKKLNEALSILDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNE 694

Query: 226 MEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGR 285
           M     +    TY   I+ YCK G   EA  +   MER G++PD+VTYN  I+G    G 
Sbjct: 695 MISSGHKPSAITYTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVFINGCGHMGY 754

Query: 286 MREARRLFRDIKGAT--PNHVTYTTLIDGYCRAN----------------DLEEALRLRE 327
           M  A    + +  A+  PN+ TY  L+  + + +                 L+   +L E
Sbjct: 755 MDCAFSTLKRMIDASCEPNYWTYWLLLKHFLKMSLANAHYVDTSGMWNWIKLDTVWQLLE 814

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
            M   G+ P  VTY+SI+   CK  R+ +A  LL+ M  K I+P+      LI   C I 
Sbjct: 815 RMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIK 874

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
               A      M+E G      +Y  LI G C   + D AK L   +L+  ++ +  ++ 
Sbjct: 875 LFEKAASFVTNMIECGFQPHLESYHYLITGLCDEGDYDKAKALFCDLLEMDYNHNEVAWK 934

Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVY 481
            L DG     + +   +LL    +R   +D   Y
Sbjct: 935 ILNDGLLKAGHVDICSQLLSAMENRHCRIDSETY 968



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 112/453 (24%), Positives = 189/453 (41%), Gaps = 83/453 (18%)

Query: 137 VIFYANLKMTQ-------DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYK 189
           VI Y  L   Q       +  ++F+ M  + L P   A  VL ++L K    +   + Y 
Sbjct: 532 VITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAE---EAYS 588

Query: 190 KMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKG 249
            +V+ GVV     Y  L+    K+ + +    L+ +M  +  +AD  TY+ L+   CK+ 
Sbjct: 589 FLVKKGVVLTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQK 648

Query: 250 MHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYT 307
              EAL++ D+M   G+  +IV Y  +I    +EG+   A+ +F ++   G  P+ +TYT
Sbjct: 649 KLNEALSILDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAITYT 708

Query: 308 TLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEK 367
             I  YC+   +EEA  L   M   GV P VVTYN  +      G +  A   L  M + 
Sbjct: 709 VFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRMIDA 768

Query: 368 KIAPDNVTCNTLINAYCKIG-------DTA---------SAMKVKNRMLEAGLMLDQFTY 411
              P+  T   L+  + K+        DT+         +  ++  RM++ GL     TY
Sbjct: 769 SCEPNYWTYWLLLKHFLKMSLANAHYVDTSGMWNWIKLDTVWQLLERMVKHGLNPTAVTY 828

Query: 412 KALIHGFCKAKEMDIAKELL-----------------------------------FGMLD 436
            ++I GFCKA  ++ A  LL                                     M++
Sbjct: 829 SSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFEKAASFVTNMIE 888

Query: 437 AGFSPSYCSYSWLVDGYCNK------------------NNEEALLKLLDEFVSRGLCVDV 478
            GF P   SY +L+ G C++                  N+ E   K+L++ + +   VD+
Sbjct: 889 CGFQPHLESYHYLITGLCDEGDYDKAKALFCDLLEMDYNHNEVAWKILNDGLLKAGHVDI 948

Query: 479 --SVYRALIRRFCKKEKVDYAQRLFNLMQGNGI 509
              +  A+  R C+ +   Y+    N+ + +G+
Sbjct: 949 CSQLLSAMENRHCRIDSETYSMVTNNIHEASGM 981



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 83/286 (29%), Positives = 130/286 (45%), Gaps = 6/286 (2%)

Query: 286 MREARRLFRDIKGATPNHVT-----YTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVT 340
           MREA    + I+ A    +      Y   +    R +  E   +L   +  +G+ P  VT
Sbjct: 126 MREAVDAIQAIRRAGGKRLALSPKCYNLALRSLLRFDMTEHMGKLYSQLVQEGLLPDTVT 185

Query: 341 YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML 400
           YN+++   CKEG +  A+R    + E  +  D  TCN L+  YC+ GD   A  +   M 
Sbjct: 186 YNTMIMAYCKEGSLAIAHRYFRLLRESGMEMDTYTCNALLLGYCRTGDLRKACWLLMMMP 245

Query: 401 EAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEE 460
             G   ++++Y  LI G C+ + +  A  LL  ML  G SP+  +Y+ L+ G C +    
Sbjct: 246 LMGCRRNEYSYTILIQGLCETRCVREALVLLLMMLQDGCSPNLHTYTLLIRGLCKEGRIH 305

Query: 461 ALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLA 520
               LLDE   RG+   V  Y A+I  +CK  ++  A  +  LM+GNG   D   Y SL 
Sbjct: 306 DARVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLMEGNGCNPDDWTYNSLI 365

Query: 521 YAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
           +     G+P    ++L+    R    T+  + +    Y K  +I D
Sbjct: 366 HGLC-GGKPDEAEELLNGAIARGFSPTVITFTNIINGYCKAEKIDD 410



 Score = 41.2 bits (95), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 40/191 (20%), Positives = 76/191 (39%), Gaps = 19/191 (9%)

Query: 44  HKVLLNLYNCCHIPSLSCAFFKWAE----SAVPNYKHSLQSHWTMIHILTK----NKHFK 95
           + V +N   C H+  + CAF         S  PNY     ++W ++    K    N H+ 
Sbjct: 742 YNVFIN--GCGHMGYMDCAFSTLKRMIDASCEPNY----WTYWLLLKHFLKMSLANAHYV 795

Query: 96  SAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQ 155
               M   I L    +   +L  +VK   +P   ++  S ++  +      ++   + D 
Sbjct: 796 DTSGMWNWIKLD---TVWQLLERMVKHGLNPTAVTY--SSIIAGFCKATRLEEACVLLDH 850

Query: 156 MRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSD 215
           M   ++ P+    T+L+      +L +        M++ G   ++  Y+ LI   C   D
Sbjct: 851 MLGKDISPNEEIYTMLIKCCCDIKLFEKAASFVTNMIECGFQPHLESYHYLITGLCDEGD 910

Query: 216 VDKVEKLLCEM 226
            DK + L C++
Sbjct: 911 YDKAKALFCDL 921


>gi|414590400|tpg|DAA40971.1| TPA: hypothetical protein ZEAMMB73_404079 [Zea mays]
          Length = 745

 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 125/416 (30%), Positives = 212/416 (50%), Gaps = 8/416 (1%)

Query: 105 ALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPH 164
           AL +  +   +L+ +V    +P  N+ V + +V    +     D L+V + M    ++  
Sbjct: 303 ALGELENAVKLLDEMVAGGVEP--NATVYTSVVALLCDKGWISDALRVVEDMVQRKVILD 360

Query: 165 LHACTVLLNSLAK--DRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
               T +L+      D ++   W  + +M + G+  +   Y  +I+  C++ ++++ EKL
Sbjct: 361 EALYTTVLSGFCNKGDLVSARRW--FDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKL 418

Query: 223 LCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR 282
           L EM  + +  D  TY  LI  YCK+G   EA  + + M + G++P++VTY +L  G C+
Sbjct: 419 LQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCK 478

Query: 283 EGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVT 340
           +G ++ A  L  ++  KG   N  TY +LI+G C+A  LE+A+R    M    + P V T
Sbjct: 479 QGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYT 538

Query: 341 YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML 400
           Y +++  LCK G +  A+ LL EM +K I P  VT N L+N +C  G      K+ + ML
Sbjct: 539 YTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWML 598

Query: 401 EAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEE 460
           E  +  +  TY +L+  +C    M    E+  GM      P+  +Y+ L+ G+C   N +
Sbjct: 599 EKNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMK 658

Query: 461 ALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIY 516
             L   DE + +G  +  + Y ALIR   KK+K   A+ LF+ M+  G+  +S +Y
Sbjct: 659 EALYFHDEMIQKGFRLTATSYSALIRLLNKKKKFVEARELFHDMRKEGLTAESDVY 714



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 123/411 (29%), Positives = 210/411 (51%), Gaps = 7/411 (1%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNS-LAKDRLTDMVWKVYKKMVQLGVVANIHLYNV 205
           +D  Q+FD+M      P +    +L++   A   L + V K+  +MV  GV  N  +Y  
Sbjct: 276 KDARQLFDEMAS---APDVVTYGILIHGHCALGELENAV-KLLDEMVAGGVEPNATVYTS 331

Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
           ++   C    +    +++ +M  + V  D   Y T+++ +C KG    A    D M+R+G
Sbjct: 332 VVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLVSARRWFDEMQRKG 391

Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEAL 323
           ++ D VTY ++I+G CR   + EA +L +++  +    + VTYT LIDGYC+   + EA 
Sbjct: 392 LATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAF 451

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
           ++   M  +GV P VVTY ++   LCK+G ++ AN LL+EM+ K +  +  T N+LIN  
Sbjct: 452 QMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGL 511

Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY 443
           CK G    AM+    M  A L  D +TY  LI   CK+ ++D A  LL  MLD G  P+ 
Sbjct: 512 CKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTI 571

Query: 444 CSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNL 503
            +Y+ L++G+C     E   KLLD  + + +  + + Y +L++++C +  +     ++  
Sbjct: 572 VTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKG 631

Query: 504 MQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSF 554
           M+   +  +   Y  L   + +A   K      D+M ++   +T   Y + 
Sbjct: 632 MRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSYSAL 682



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 117/412 (28%), Positives = 191/412 (46%), Gaps = 13/412 (3%)

Query: 155 QMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSS 214
           ++R + + P   AC  +L+ L  D   ++  ++  K        N+  YN+L+ A C + 
Sbjct: 222 RLRQYGISPSPEACNAVLSRLPLDEAIELFQELPHK--------NVCSYNILLKALCDAG 273

Query: 215 DVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYN 274
            V    +L  EM       D+ TY  LI  +C  G    A+ + D M   G+ P+   Y 
Sbjct: 274 RVKDARQLFDEMASA---PDVVTYGILIHGHCALGELENAVKLLDEMVAGGVEPNATVYT 330

Query: 275 SLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAK 332
           S++   C +G + +A R+  D+  +    +   YTT++ G+C   DL  A R  + M  K
Sbjct: 331 SVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLVSARRWFDEMQRK 390

Query: 333 GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
           G+    VTY +++  LC+   + +A +LL EM  +++  D VT   LI+ YCK G  A A
Sbjct: 391 GLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEA 450

Query: 393 MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
            ++ N M++ G+  +  TY AL  G CK  ++  A ELL  M + G   + C+Y+ L++G
Sbjct: 451 FQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLING 510

Query: 453 YCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGD 512
            C     E  ++ + +  +  L  DV  Y  LI   CK   +D A  L   M   GI   
Sbjct: 511 LCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPT 570

Query: 513 SVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
            V Y  L   +  +G  +    +LD M  + +      Y S    Y  +N +
Sbjct: 571 IVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNM 622



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 94/304 (30%), Positives = 150/304 (49%), Gaps = 2/304 (0%)

Query: 169 TVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEF 228
           TVL++   K       ++++  MVQ GV  N+  Y  L    CK  DV    +LL EM  
Sbjct: 435 TVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSN 494

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
           K +  +  TYN+LI   CK G   +A+     M+   + PD+ TY +LI   C+ G +  
Sbjct: 495 KGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDR 554

Query: 289 ARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILR 346
           A  L +++  KG  P  VTY  L++G+C +  +E   +L + M  K ++P   TYNS+++
Sbjct: 555 AHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMK 614

Query: 347 KLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLML 406
           + C E  ++    +   M  + + P+  T N LI  +CK  +   A+   + M++ G  L
Sbjct: 615 QYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRL 674

Query: 407 DQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLL 466
              +Y ALI    K K+   A+EL   M   G +     Y + +D   N++N E+ L L 
Sbjct: 675 TATSYSALIRLLNKKKKFVEARELFHDMRKEGLTAESDVYDFYIDLNFNEDNLESTLALC 734

Query: 467 DEFV 470
           DE V
Sbjct: 735 DELV 738



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 67/245 (27%), Positives = 124/245 (50%), Gaps = 4/245 (1%)

Query: 165 LHACTV--LLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
           L+ACT   L+N L K    +   +    M    +  +++ Y  LI A CKS D+D+   L
Sbjct: 499 LNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSL 558

Query: 223 LCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR 282
           L EM  K ++  + TYN L+  +C  G       + D M  + I P+  TYNSL+  +C 
Sbjct: 559 LQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCI 618

Query: 283 EGRMREARRLFRDIKG--ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVT 340
           E  M+    +++ ++     PN  TY  LI G+C+A +++EAL   + M  KG      +
Sbjct: 619 ENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATS 678

Query: 341 YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML 400
           Y++++R L K+ +  +A  L ++M ++ +  ++   +  I+      +  S + + + ++
Sbjct: 679 YSALIRLLNKKKKFVEARELFHDMRKEGLTAESDVYDFYIDLNFNEDNLESTLALCDELV 738

Query: 401 EAGLM 405
           EA ++
Sbjct: 739 EASIV 743


>gi|255584017|ref|XP_002532754.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527505|gb|EEF29631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 721

 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 119/415 (28%), Positives = 205/415 (49%), Gaps = 11/415 (2%)

Query: 156 MRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSD 215
           M+  NLMP +   + LLN L + R  + V  ++  +V   V  +I++Y+ ++ + C+  D
Sbjct: 87  MKDCNLMPEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCELKD 146

Query: 216 VDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNS 275
            +K ++++  MEF   +  +  YN LI   CK    +EAL +++ + ++G+  ++VTY  
Sbjct: 147 FNKAKEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTY-- 204

Query: 276 LIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKG 333
                   G+  EA  LF+++  KG   NH+TY+ LID +CR  +++ A+   + M    
Sbjct: 205 -------YGKFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKAS 257

Query: 334 VYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAM 393
           +   V  YNS++   CK G    A    +EM +K + P  VT  +LI+ YC  G+   A 
Sbjct: 258 IEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAF 317

Query: 394 KVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGY 453
           KV N M   G+  + +T+ A+I G C+A  M  A  L   M +    PS  +Y+ +++G+
Sbjct: 318 KVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGH 377

Query: 454 CNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDS 513
           C   N      LLDE V +G   D   YR LI   C   +V  A+   + +  +    ++
Sbjct: 378 CRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNN 437

Query: 514 VIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLF 568
           + Y++L + Y + G  K        M  R + + L  Y       A++++   LF
Sbjct: 438 MCYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALF 492



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 113/343 (32%), Positives = 180/343 (52%), Gaps = 2/343 (0%)

Query: 187 VYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYC 246
           ++K+M + G+ AN   Y++LI + C+  ++D     L +M    +   ++ YN+LI  YC
Sbjct: 214 LFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGYC 273

Query: 247 KKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHV 304
           K G    A    D M  +G++P +VTY SLI G+C EG   +A +++ ++  KG +PN  
Sbjct: 274 KLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTY 333

Query: 305 TYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM 364
           T+T +I G CRAN + EA+RL   M  + + P  VTYN ++   C+ G I +A  LL+EM
Sbjct: 334 TFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEM 393

Query: 365 NEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEM 424
             K   PD  T   LI+  C +G  + A +  + + +    L+   Y AL+HG+CK    
Sbjct: 394 VGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRF 453

Query: 425 DIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRAL 484
             A      M++ G +     Y+ L+DG   +++  AL  LL E  + GL  D  +Y  +
Sbjct: 454 KDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNM 513

Query: 485 IRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
           I R  K   +  A  L+++M   G L + V YT+L     +AG
Sbjct: 514 IDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAG 556



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 109/371 (29%), Positives = 182/371 (49%), Gaps = 3/371 (0%)

Query: 153 FDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCK 212
           FD+M    L P +   T L++    +      +KVY +M   G+  N + +  +I   C+
Sbjct: 285 FDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCR 344

Query: 213 SSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVT 272
           ++ + +  +L  EM+ + +     TYN +I  +C+ G   EA  + D M  +G  PD  T
Sbjct: 345 ANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYT 404

Query: 273 YNSLIHGFCREGRMREARRLFRDIKGA--TPNHVTYTTLIDGYCRANDLEEALRLREVMA 330
           Y  LI G C  GR+ EA+    D+       N++ Y+ L+ GYC+    ++A+    VM 
Sbjct: 405 YRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRVMV 464

Query: 331 AKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTA 390
            +GV   +V Y  ++    +E   R    LL EM+   + PD V    +I+ + K G+  
Sbjct: 465 ERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLK 524

Query: 391 SAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLV 450
            A  + + M++ G + +  TY ALI+G CKA  MD A+ L    L +  +P++ +Y   +
Sbjct: 525 EAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHITYGCFL 584

Query: 451 DGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGIL 510
           D      N E  ++L    +   L   VS Y  LIR FC+  K++ A +L + M  N IL
Sbjct: 585 DHLTRGGNMEKAVQLHHAMLKGFLATTVS-YNILIRGFCRLGKIEEATKLLHGMTDNDIL 643

Query: 511 GDSVIYTSLAY 521
            D + Y+++ Y
Sbjct: 644 PDYITYSTIIY 654



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 106/355 (29%), Positives = 174/355 (49%), Gaps = 10/355 (2%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           +F +M    L  +    ++L++S  +    D       KM +  +   ++ YN LI+  C
Sbjct: 214 LFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGYC 273

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           K  +    +    EM  K +   + TY +LI+ YC +G  ++A  V + M  +GISP+  
Sbjct: 274 KLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTY 333

Query: 272 TYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           T+ ++I G CR   M EA RLF ++K     P+ VTY  +I+G+CR+ ++ EA  L + M
Sbjct: 334 TFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEM 393

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
             KG  P   TY  ++  LC  GR+ +A   ++++++     +N+  + L++ YCK G  
Sbjct: 394 VGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRF 453

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGML----DAGFSPSYCS 445
             A+     M+E G+ +D   Y  LI G   A+E D     LFG+L    + G  P    
Sbjct: 454 KDAVSACRVMVERGVAMDLVCYAILIDG--TAREHDT--RALFGLLKEMHNHGLRPDAVI 509

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRL 500
           Y+ ++D +    N +    L D  V  G   +V  Y ALI   CK   +D A+ L
Sbjct: 510 YTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELL 564



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 99/388 (25%), Positives = 188/388 (48%), Gaps = 3/388 (0%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N++  + ++       M  + +++F +M+   +MP      V++    +       + + 
Sbjct: 331 NTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLL 390

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
            +MV  G V + + Y  LI   C    V + ++ + ++     + +   Y+ L+  YCK+
Sbjct: 391 DEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKE 450

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTY 306
           G   +A++    M   G++ D+V Y  LI G  RE   R    L +++   G  P+ V Y
Sbjct: 451 GRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIY 510

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
           T +ID + +A +L+EA  L ++M  +G  P VVTY +++  LCK G +  A  L  E   
Sbjct: 511 TNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKETLV 570

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
             + P+++T    ++   + G+   A+++ + ML+ G +    +Y  LI GFC+  +++ 
Sbjct: 571 SDVTPNHITYGCFLDHLTRGGNMEKAVQLHHAMLK-GFLATTVSYNILIRGFCRLGKIEE 629

Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
           A +LL GM D    P Y +YS ++   C ++N +  +KL    + +GL  D   Y  L+ 
Sbjct: 630 ATKLLHGMTDNDILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLAYSFLVH 689

Query: 487 RFCKKEKVDYAQRLFNLMQGNGILGDSV 514
             C   +++ A  L + M   G+  + V
Sbjct: 690 GCCIAGELEKAFELRDEMIRRGMRSNHV 717



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 71/259 (27%), Positives = 121/259 (46%), Gaps = 36/259 (13%)

Query: 191 MVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGM 250
           MV+ GV  ++  Y +LI    +  D   +  LL EM    +R D   Y  +I  + K G 
Sbjct: 463 MVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGN 522

Query: 251 HYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTT 308
             EA  + D M  EG  P++VTY +LI+G C+ G M +A  L ++  +   TPNH+TY  
Sbjct: 523 LKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHITYGC 582

Query: 309 LID----------------------------------GYCRANDLEEALRLREVMAAKGV 334
            +D                                  G+CR   +EEA +L   M    +
Sbjct: 583 FLDHLTRGGNMEKAVQLHHAMLKGFLATTVSYNILIRGFCRLGKIEEATKLLHGMTDNDI 642

Query: 335 YPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMK 394
            P  +TY++I+ + CK   +++A +L + M +K + PD +  + L++  C  G+   A +
Sbjct: 643 LPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLAYSFLVHGCCIAGELEKAFE 702

Query: 395 VKNRMLEAGLMLDQFTYKA 413
           +++ M+  G+  +  T K+
Sbjct: 703 LRDEMIRRGMRSNHVTPKS 721


>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Glycine max]
          Length = 747

 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 124/366 (33%), Positives = 186/366 (50%), Gaps = 11/366 (3%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           ++FD+M    L P + A   L++ L K  L     ++  K+++ GV  N+  +N+ +   
Sbjct: 202 ELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGL 261

Query: 211 CKSSDVDKV---------EKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRM 261
           C+   +D+          E+ L +M       D  TYN++I  YCKKGM  +A  V    
Sbjct: 262 CREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDA 321

Query: 262 EREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDL 319
             +G  PD  TY SLI+GFC++G    A  +F+D   KG  P+ V Y TLI G  +   +
Sbjct: 322 VFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLI 381

Query: 320 EEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTL 379
             AL+L   MA  G  P + TYN ++  LCK G + DA+ L+++   K   PD  T NTL
Sbjct: 382 LPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTL 441

Query: 380 INAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGF 439
           I+ YCK     SA ++ NRM   G+  D  TY  L++G CKA + +   E+   M + G 
Sbjct: 442 IDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGC 501

Query: 440 SPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQR 499
           +P+  +Y+ +VD  C        + LL E  S+GL  DV  +  L   FCK   +D A +
Sbjct: 502 TPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQ 561

Query: 500 LFNLMQ 505
           LF  M+
Sbjct: 562 LFRRME 567



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 138/526 (26%), Positives = 241/526 (45%), Gaps = 31/526 (5%)

Query: 57  PSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVL 116
           P  +   F  A+S    +KH+  ++  ++  L  +  F+  + +L +  +R+ ++   + 
Sbjct: 20  PLKALEMFNSAKSE-DGFKHTASTYKCIVQKLGHHGEFEEMEKLLSE--MRENVNNALLE 76

Query: 117 NALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLA 176
            A ++   +              Y      Q+ +  F++M  +N  P +H+   ++N L 
Sbjct: 77  GAYIEAMKN--------------YGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILV 122

Query: 177 KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLF 236
           +    +   KVY +M   GV ++++ Y + I + CK++      +LL  M      ++  
Sbjct: 123 EFGYHNQAHKVYMRMRDRGVQSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAV 182

Query: 237 TYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI 296
            Y T++A     G H  A  + D M    + PD+V +N L+H  C++G + E+ RL   +
Sbjct: 183 AYCTVVAGLYDSGEHDHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKV 242

Query: 297 --KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAK---------GVYPGVVTYNSIL 345
             +G  PN  T+   + G CR   L+ A+R   V+ A+         G  P  +TYNSI+
Sbjct: 243 LKRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSII 302

Query: 346 RKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLM 405
              CK+G ++DANR+L +   K   PD  T  +LIN +CK GD   AM V    L  GL 
Sbjct: 303 DGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLR 362

Query: 406 LDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKL 465
                Y  LI G  +   +  A +L+  M + G  P+  +Y+ +++G C          L
Sbjct: 363 PSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHL 422

Query: 466 LDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWR 525
           +D+ +++G   D+  Y  LI  +CK+ K+D A  + N M   G+  D + Y +L     +
Sbjct: 423 VDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCK 482

Query: 526 AGEPKACSDILDDMYRRRL---MITLKIYRSFSASYAKDNEILDLF 568
           AG+ +   +I   M  +     +IT  I         K NE +DL 
Sbjct: 483 AGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLL 528



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 105/358 (29%), Positives = 191/358 (53%), Gaps = 11/358 (3%)

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
           D   +++ +M+   +  ++  +N L+H  CK   V + E+LL ++  + V  +LFT+N  
Sbjct: 198 DHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIF 257

Query: 242 IALYCKKGMHYEALAVQDRMERE---------GISPDIVTYNSLIHGFCREGRMREARRL 292
           +   C++G    A+     +E E         G  PD +TYNS+I G+C++G +++A R+
Sbjct: 258 VQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRV 317

Query: 293 FRD--IKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
            +D   KG  P+  TY +LI+G+C+  D + A+ + +    KG+ P +V YN++++ L +
Sbjct: 318 LKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQ 377

Query: 351 EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
           +G I  A +L+NEM E    P+  T N +IN  CK+G  + A  + +  +  G   D FT
Sbjct: 378 QGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFT 437

Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFV 470
           Y  LI G+CK  ++D A E++  M   G +P   +Y+ L++G C     E ++++     
Sbjct: 438 YNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAME 497

Query: 471 SRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
            +G   ++  Y  ++   CK +KV+ A  L   M+  G+  D V + +L   + + G+
Sbjct: 498 EKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGD 555



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 113/378 (29%), Positives = 185/378 (48%), Gaps = 3/378 (0%)

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
           Y    M QD  +V          P       L+N   KD   D    V+K  +  G+  +
Sbjct: 305 YCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPS 364

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
           I LYN LI    +   +    +L+ EM       +++TYN +I   CK G   +A  + D
Sbjct: 365 IVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVD 424

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRAN 317
               +G  PDI TYN+LI G+C++ ++  A  +   +  +G TP+ +TY TL++G C+A 
Sbjct: 425 DAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAG 484

Query: 318 DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCN 377
             EE + + + M  KG  P ++TYN I+  LCK  ++ +A  LL EM  K + PD V+  
Sbjct: 485 KSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFG 544

Query: 378 TLINAYCKIGDTASAMKVKNRM-LEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD 436
           TL   +CKIGD   A ++  RM  +  +     TY  ++  F +   M++A +L   M +
Sbjct: 545 TLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKN 604

Query: 437 AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDY 496
           +G  P   +Y  ++DG+C   N     K L E + +     ++ +  ++   C K+KV  
Sbjct: 605 SGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKRFIPSLTTFGRVLNCLCVKDKVHE 664

Query: 497 AQRLFNLMQGNGILGDSV 514
           A  + +LM   GI+ ++V
Sbjct: 665 AVGIIHLMLQKGIVPETV 682



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 73/270 (27%), Positives = 138/270 (51%), Gaps = 8/270 (2%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           ++ ++M    + P +     LLN L K   ++ V +++K M + G   NI  YN+++ + 
Sbjct: 456 EMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSL 515

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMERE-GISPD 269
           CK+  V++   LL EM+ K ++ D+ ++ TL   +CK G    A  +  RME++  +   
Sbjct: 516 CKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHT 575

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLRE 327
             TYN ++  F  +  M  A +LF  +K  G  P++ TY  +IDG+C+  ++ +  +   
Sbjct: 576 TATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLL 635

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
               K   P + T+  +L  LC + ++ +A  +++ M +K I P+ V  NT+  A  K+ 
Sbjct: 636 ENMEKRFIPSLTTFGRVLNCLCVKDKVHEAVGIIHLMLQKGIVPETV--NTIFEADKKV- 692

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHG 417
             A+   +   +L+ G  +  +TY+ L  G
Sbjct: 693 -VAAPKILVEDLLKKG-HIAYYTYELLYDG 720


>gi|449493486|ref|XP_004159312.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 772

 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 143/504 (28%), Positives = 225/504 (44%), Gaps = 64/504 (12%)

Query: 57  PSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVL 116
           P ++  FF+W   A P++K S      ++ IL  N    +A  ++E++   +      VL
Sbjct: 99  PRVALRFFRWV-MAQPDFKESEFVFCAILDILVGNDLMHAAYWVMERVVSFEMHGVVDVL 157

Query: 117 NALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLA 176
            A            HV   LV               FD+M  + L+P +  C  +L  L 
Sbjct: 158 IA-----------GHVXCLLV---------------FDKMIRNGLLPDVKNCNRILRVLR 191

Query: 177 KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFK-----DV 231
            + L      VY  M Q G+   +  YN ++ + CK   VD+  +LL EM+ +     DV
Sbjct: 192 DENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDV 251

Query: 232 RADL------------------------------FTYNTLIALYCKKGMHYEALAVQDRM 261
             ++                              +TYN LI  +C+KG+  EA  + + M
Sbjct: 252 TYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEM 311

Query: 262 EREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGA--TPNHVTYTTLIDGYCRANDL 319
                 P + TYN+L++G C+  ++   R  F D+  +  TP+ V++ +L+ GYCR   +
Sbjct: 312 VNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCI 371

Query: 320 EEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTL 379
            EA  L + +  + + P V+TYN+++  LC  G +  A RL  EM ++ + PD  T   L
Sbjct: 372 SEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTIL 431

Query: 380 INAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGF 439
           +N   K+G  + A    N ML  GL  D+F Y   I G  K  +  +A  +   ML AGF
Sbjct: 432 VNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGF 491

Query: 440 SPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQR 499
            P   +Y+  V   C + N E    LL+  VS GL  D   Y ++I  F K   +  A+ 
Sbjct: 492 PPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKARE 551

Query: 500 LFNLMQGNGILGDSVIYTSLAYAY 523
           +FN M   G+    V YT L +A+
Sbjct: 552 VFNEMLSKGVAPSVVTYTVLIHAH 575



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 104/372 (27%), Positives = 169/372 (45%), Gaps = 2/372 (0%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           +   + ++M      P L     L+  L K      V   +  M++     +I  +N L+
Sbjct: 303 EAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLL 362

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           +  C++  + +   L  E++ +D+   + TYNTLI   C  G    AL ++  M  +G+ 
Sbjct: 363 YGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLF 422

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
           PDI TY  L++G  + G +  AR  F ++  KG  P+   Y T I G  +  D   A  +
Sbjct: 423 PDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSM 482

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
           +E M A G  P V+TYN  +  LC++G   +A  LL  M    + PD+VT  ++IN + K
Sbjct: 483 QEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVK 542

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            G    A +V N ML  G+     TY  LIH     + +D+A      ML+     +  +
Sbjct: 543 NGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVIT 602

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+ +++G C     +   K  DE   +G+  +   Y  LI   C     + A RL+  M 
Sbjct: 603 YNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREML 662

Query: 506 GNGILGDSVIYT 517
              I  DS  ++
Sbjct: 663 DRKIQPDSFTHS 674



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 85/313 (27%), Positives = 140/313 (44%), Gaps = 37/313 (11%)

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
           Y       +   +FD+++  +L+P +     L++ L      D   ++ K+M   G+  +
Sbjct: 365 YCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPD 424

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
           I  Y +L++ C K   V        EM  K ++ D F YNT I    K      A ++Q+
Sbjct: 425 IFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQE 484

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRAN 317
            M   G  PD++TYN  +H  C++G   EA  L  ++   G  P+HVTYT++I+G+ +  
Sbjct: 485 EMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNG 544

Query: 318 DLEEALRLREVMAAKGVYPGVVTY-----------------------------------N 342
            L +A  +   M +KGV P VVTY                                   N
Sbjct: 545 HLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYN 604

Query: 343 SILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEA 402
           +I+  LC   R+ +A +  +EM EK I P+  +   LIN  C +G    A+++   ML+ 
Sbjct: 605 AIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDR 664

Query: 403 GLMLDQFTYKALI 415
            +  D FT+   +
Sbjct: 665 KIQPDSFTHSVFL 677



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 86/296 (29%), Positives = 132/296 (44%), Gaps = 2/296 (0%)

Query: 251 HYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTT 308
           H   L V D+M R G+ PD+   N ++     E  + +A+ ++  ++  G  P  VTY T
Sbjct: 161 HVXCLLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNT 220

Query: 309 LIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKK 368
           ++D YC+   +++AL L   M  +G YP  VTYN ++  L K+G +  A  L+ EM    
Sbjct: 221 MLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSG 280

Query: 369 IAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAK 428
           +     T N LIN +C+ G    A  +   M+         TY  L++G CK  ++   +
Sbjct: 281 LNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVR 340

Query: 429 ELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRF 488
                ML + F+P   S++ L+ GYC          L DE   R L   V  Y  LI   
Sbjct: 341 LRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGL 400

Query: 489 CKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL 544
           C    +D A RL   M   G+  D   YT L    ++ G         ++M  + L
Sbjct: 401 CMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGL 456



 Score =  105 bits (261), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 69/225 (30%), Positives = 111/225 (49%)

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M   G+ P V   N ILR L  E  +  A  +   M +  I P  VT NT++++YCK G 
Sbjct: 171 MIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGR 230

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
              A+++ + M E G   +  TY  L++G  K  E++ AK L+  ML++G + S  +Y+ 
Sbjct: 231 VDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNP 290

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG 508
           L++G+C K        L++E V+R     +S Y  L+   CK  +V   +  F+ M  + 
Sbjct: 291 LINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSK 350

Query: 509 ILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRS 553
              D V + SL Y Y R G       + D++  R L+ T+  Y +
Sbjct: 351 FTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNT 395



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 57/232 (24%), Positives = 104/232 (44%), Gaps = 25/232 (10%)

Query: 56  IPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIA----LRDFLS 111
           I   S AF    E     +   + ++   +H L +  +F+ A ++LE +     + D ++
Sbjct: 473 IADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVT 532

Query: 112 TPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVL 171
             S++N  VK       N H+              +   +VF++M    + P +   TVL
Sbjct: 533 YTSIINGFVK-------NGHL--------------RKAREVFNEMLSKGVAPSVVTYTVL 571

Query: 172 LNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDV 231
           +++ A  ++ D+ +  + KM++  V AN+  YN +I+  C +  +D+  K   EME K +
Sbjct: 572 IHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGI 631

Query: 232 RADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCRE 283
             + F+Y  LI   C  G   EAL +   M    I PD  T++  +    R+
Sbjct: 632 LPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNLHRD 683


>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 572

 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 123/377 (32%), Positives = 188/377 (49%), Gaps = 2/377 (0%)

Query: 142 NLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIH 201
           N+    D L +F++M      P +   + LL S+ + +    V  +YK+M   G+  N +
Sbjct: 31  NVNTIDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTY 90

Query: 202 LYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRM 261
             N+LI++ C  + +     +L ++     +    T+ TLI   C +G   EAL + D+M
Sbjct: 91  TLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKM 150

Query: 262 EREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDL 319
             EG  PD++TY +LI+G C+ G    A R  R +  +   P  V Y+T+ID  C+   L
Sbjct: 151 TGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQL 210

Query: 320 EEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTL 379
            EAL L   M AKG+ P   TY+S++  LC  G  ++A RL   M  +KI PD +T NTL
Sbjct: 211 TEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTL 270

Query: 380 INAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGF 439
           ++A CK G    A  V + M+++ L  D  TY +L+ G C   EM     +   M+  G 
Sbjct: 271 VDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGC 330

Query: 440 SPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQR 499
            PS  SY+ L++GYC     +  + L +E   +GL  D   Y  LI   C   ++  A  
Sbjct: 331 VPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIA 390

Query: 500 LFNLMQGNGILGDSVIY 516
           LF+ M   G + D V Y
Sbjct: 391 LFHEMVVYGQIPDLVTY 407



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 113/404 (27%), Positives = 189/404 (46%), Gaps = 8/404 (1%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           + LQ+FD+M      P +     L+N L K   T    +  + M Q      + +Y+ +I
Sbjct: 142 EALQLFDKMTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTII 201

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
            + CK   + +   L  +M  K +  + FTY++LI   C  G   EA+ +   M    I 
Sbjct: 202 DSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIM 261

Query: 268 PDIVTYNSLIHGFCREGRMREARRLF-----RDIKGATPNHVTYTTLIDGYCRANDLEEA 322
           PD +T+N+L+   C+EG + +A  +       D+K   P+ VTY +L+DG+C  +++ + 
Sbjct: 262 PDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLK---PDVVTYNSLMDGHCLRSEMGKT 318

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
           + + + M  KG  P V++Y +++   CK   +  A  L  EM+++ + PD VT NTLI+ 
Sbjct: 319 VNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHG 378

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
            C +G    A+ + + M+  G + D  TY+ L    CK   +  A  LL  +      P 
Sbjct: 379 LCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPD 438

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
              YS ++DG C     EA   L  +  S+GL  DV  Y  +I   C++  +  A +LF 
Sbjct: 439 IHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFG 498

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMI 546
            M  NG   ++  Y  +   + R  E      +  +M  R   I
Sbjct: 499 EMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFSI 542



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 134/525 (25%), Positives = 225/525 (42%), Gaps = 72/525 (13%)

Query: 9   SDTKFIKTISAIMLKGHWAKLLNPNIASSLTSTAIH------KVLLNLYNCCHIPSLSCA 62
           S   F K +++I    H++ +L+  +   + S  I        +L+N +  CH+  L  A
Sbjct: 53  SIVDFSKLLTSITRMKHYSTVLS--LYKQMDSFGIPHNTYTLNILINSF--CHLNRLGFA 108

Query: 63  FFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDF----LSTPSVLNA 118
           F    +     Y+ S  +  T+I  L        A  + +K+    F    L+  +++N 
Sbjct: 109 FSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLING 168

Query: 119 LVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKD 178
           L K+     GN                T   ++    M   N  P +   + +++SL KD
Sbjct: 169 LCKV-----GN----------------TSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKD 207

Query: 179 RLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTY 238
           R       ++  M+  G+  N   Y+ LIH  C      +  +L   M  + +  D  T+
Sbjct: 208 RQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTF 267

Query: 239 NTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSL---------------------- 276
           NTL+   CK+GM  +A  V D M +  + PD+VTYNSL                      
Sbjct: 268 NTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVR 327

Query: 277 -------------IHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEE 321
                        I+G+C+   M +A  LF ++  +G  P+ VTY TLI G C    L +
Sbjct: 328 KGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRD 387

Query: 322 ALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
           A+ L   M   G  P +VTY  +   LCK  R+ +A  LL  +    + PD    + +++
Sbjct: 388 AIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMD 447

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
             C+ G+  +A  + +++   GL  D  TY  +I+G C+   +  A +L   M + G SP
Sbjct: 448 GMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSP 507

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
           + C+Y+ +  G+   N     ++L  E +SRG  +DVS    L+ 
Sbjct: 508 NACTYNLITRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTTLLVE 552



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 96/326 (29%), Positives = 166/326 (50%), Gaps = 2/326 (0%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           ++ +++F  M    +MP       L+++L K+ +      V   M+Q  +  ++  YN L
Sbjct: 246 KEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSL 305

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           +   C  S++ K   +   M  K     + +Y TLI  YCK  +  +A+ + + M ++G+
Sbjct: 306 MDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGL 365

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEALR 324
            PD VTYN+LIHG C  GR+R+A  LF +  + G  P+ VTY  L D  C+ + L EA+ 
Sbjct: 366 IPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMV 425

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           L +V+    + P +  Y+ ++  +C+ G +  A  L ++++ K + PD  T   +IN  C
Sbjct: 426 LLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLC 485

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           + G  A A K+   M E G   +  TY  +  GF +  E   A +L   ML  GFS    
Sbjct: 486 QQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFSIDVS 545

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFV 470
           + + LV+   +   ++++ ++L EFV
Sbjct: 546 TTTLLVEMLSDDGLDQSVKQILCEFV 571



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 59/230 (25%), Positives = 96/230 (41%)

Query: 316 ANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVT 375
            N +++AL L   M      P +V ++ +L  + +         L  +M+   I  +  T
Sbjct: 32  VNTIDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYT 91

Query: 376 CNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGML 435
            N LIN++C +     A  V   +L+ G      T+  LI G C   ++  A +L   M 
Sbjct: 92  LNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMT 151

Query: 436 DAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVD 495
             GF P   +Y  L++G C   N    ++ L     R     V VY  +I   CK  ++ 
Sbjct: 152 GEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLT 211

Query: 496 YAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
            A  LF+ M   GI  ++  Y+SL +     G  K    +   M  R++M
Sbjct: 212 EALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIM 261


>gi|357439849|ref|XP_003590202.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355479250|gb|AES60453.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 772

 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 118/376 (31%), Positives = 202/376 (53%), Gaps = 3/376 (0%)

Query: 151 QVFDQMRVHNLM-PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           ++ D+M    ++ P++     LLN+    +    V ++ K M +  VV ++  Y++LI  
Sbjct: 237 ELMDEMVGKGIVKPNVFTYNTLLNAYVGRKDRKGVDEILKLMEKEQVVFSVATYSILIQW 296

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
              S D+++ EK+  EM  K++  D++ Y+++I+   + G    A A+ D M +  I P+
Sbjct: 297 YSSSGDIEEAEKIFEEMREKNIEMDVYVYSSMISWSRRLGNMKRAFALFDEMSQRDIVPN 356

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLRE 327
             TY +LI G C+ G+M  A  L  ++  KG   N V + T +DGYCR   ++EALRL+ 
Sbjct: 357 AHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNTTMDGYCRRGKMDEALRLQA 416

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
           +M  KG+   V TYN +   LCK  R  +A  +LN M EK + P+ VT    I  YCK G
Sbjct: 417 IMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTMFIEIYCKEG 476

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
           + A A ++   M + G + +  TY  LI  +CK +++  A ++   M++ G  P   +YS
Sbjct: 477 NLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAHKIKSEMINKGLLPDLYTYS 536

Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGN 507
            L+ G C     +  LKL +E   +G+  +V+ Y ++I    K+ + D A +L++ M   
Sbjct: 537 SLIHGECIVGRVDEALKLFNEMRLKGITRNVATYTSMISGLSKEGRADEAFKLYDEMMKI 596

Query: 508 GILGDSVIYTSLAYAY 523
           G++ D  ++TSL  ++
Sbjct: 597 GLIPDDRVFTSLVGSF 612



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 132/548 (24%), Positives = 261/548 (47%), Gaps = 14/548 (2%)

Query: 31  NPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNY--KHSLQSHWTMIHIL 88
           NP++ S ++    H     L      P    AFF + ++   N   K  L++H  +I  L
Sbjct: 44  NPDLHSIISCITPHVTYRVLSQPILQPHSCLAFFHFLKTQHSNISLKPDLKAHLILISRL 103

Query: 89  TKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLS----WLVIFYANLK 144
            + + F + +++L  +     +  P  ++++V + D+ +  SH +      L    ++ +
Sbjct: 104 FEARKFATMKSILNGLVTDSDIECP--VSSIVDLVDEFE--SHFVEKFCDMLFRVCSDNR 159

Query: 145 MTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVA-NIHLY 203
           +  + ++V+D +    L+    +C VLL +L +    D   + + +MV+       +   
Sbjct: 160 LFDETIRVYDYVEEKGLVIEERSCFVLLLALKRCGEVDFCVRFFHRMVESNKFEIRVQSL 219

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFKD-VRADLFTYNTLIALYCKKGMHYEALAVQDRME 262
            ++I   C+  +V+K ++L+ EM  K  V+ ++FTYNTL+  Y  +        +   ME
Sbjct: 220 TLVIDVLCRRGEVEKAKELMDEMVGKGIVKPNVFTYNTLLNAYVGRKDRKGVDEILKLME 279

Query: 263 REGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLE 320
           +E +   + TY+ LI  +   G + EA ++F ++  K    +   Y+++I    R  +++
Sbjct: 280 KEQVVFSVATYSILIQWYSSSGDIEEAEKIFEEMREKNIEMDVYVYSSMISWSRRLGNMK 339

Query: 321 EALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLI 380
            A  L + M+ + + P   TY +++  +CK G++  A  LL EM  K +  + V  NT +
Sbjct: 340 RAFALFDEMSQRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNTTM 399

Query: 381 NAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFS 440
           + YC+ G    A++++  M + G+  D FTY  L +G CK    D AK +L  M++ G  
Sbjct: 400 DGYCRRGKMDEALRLQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVK 459

Query: 441 PSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRL 500
           P+  +++  ++ YC + N     +L  +   +G   ++  Y  LI  +CKKEKV  A ++
Sbjct: 460 PNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAHKI 519

Query: 501 FNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAK 560
            + M   G+L D   Y+SL +     G       + ++M  + +   +  Y S  +  +K
Sbjct: 520 KSEMINKGLLPDLYTYSSLIHGECIVGRVDEALKLFNEMRLKGITRNVATYTSMISGLSK 579

Query: 561 DNEILDLF 568
           +    + F
Sbjct: 580 EGRADEAF 587



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 78/166 (46%), Gaps = 2/166 (1%)

Query: 115 VLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNS 174
           +LN++V+    P  N    +  +  Y       +  ++F  M     +P++     L+++
Sbjct: 449 ILNSMVEKGVKP--NVVTFTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDA 506

Query: 175 LAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRAD 234
             K        K+  +M+  G++ +++ Y+ LIH  C    VD+  KL  EM  K +  +
Sbjct: 507 YCKKEKVKQAHKIKSEMINKGLLPDLYTYSSLIHGECIVGRVDEALKLFNEMRLKGITRN 566

Query: 235 LFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGF 280
           + TY ++I+   K+G   EA  + D M + G+ PD   + SL+  F
Sbjct: 567 VATYTSMISGLSKEGRADEAFKLYDEMMKIGLIPDDRVFTSLVGSF 612


>gi|449435202|ref|XP_004135384.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 717

 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 143/504 (28%), Positives = 225/504 (44%), Gaps = 64/504 (12%)

Query: 57  PSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVL 116
           P ++  FF+W   A P++K S      ++ IL  N    +A  ++E++   +      VL
Sbjct: 99  PRVALRFFRWV-MAQPDFKESEFVFCAILDILVGNDLMHAAYWVMERVVSFEMHGVVDVL 157

Query: 117 NALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLA 176
            A            HV   LV               FD+M  + L+P +  C  +L  L 
Sbjct: 158 IA-----------GHVXCLLV---------------FDKMIRNGLLPDVKNCNRILRVLR 191

Query: 177 KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFK-----DV 231
            + L      VY  M Q G+   +  YN ++ + CK   VD+  +LL EM+ +     DV
Sbjct: 192 DENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDV 251

Query: 232 RADL------------------------------FTYNTLIALYCKKGMHYEALAVQDRM 261
             ++                              +TYN LI  +C+KG+  EA  + + M
Sbjct: 252 TYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEM 311

Query: 262 EREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGA--TPNHVTYTTLIDGYCRANDL 319
                 P + TYN+L++G C+  ++   R  F D+  +  TP+ V++ +L+ GYCR   +
Sbjct: 312 VNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCI 371

Query: 320 EEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTL 379
            EA  L + +  + + P V+TYN+++  LC  G +  A RL  EM ++ + PD  T   L
Sbjct: 372 SEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTIL 431

Query: 380 INAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGF 439
           +N   K+G  + A    N ML  GL  D+F Y   I G  K  +  +A  +   ML AGF
Sbjct: 432 VNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGF 491

Query: 440 SPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQR 499
            P   +Y+  V   C + N E    LL+  VS GL  D   Y ++I  F K   +  A+ 
Sbjct: 492 PPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKARE 551

Query: 500 LFNLMQGNGILGDSVIYTSLAYAY 523
           +FN M   G+    V YT L +A+
Sbjct: 552 VFNEMLSKGVAPSVVTYTVLIHAH 575



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 104/372 (27%), Positives = 169/372 (45%), Gaps = 2/372 (0%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           +   + ++M      P L     L+  L K      V   +  M++     +I  +N L+
Sbjct: 303 EAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLL 362

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           +  C++  + +   L  E++ +D+   + TYNTLI   C  G    AL ++  M  +G+ 
Sbjct: 363 YGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLF 422

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
           PDI TY  L++G  + G +  AR  F ++  KG  P+   Y T I G  +  D   A  +
Sbjct: 423 PDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSM 482

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
           +E M A G  P V+TYN  +  LC++G   +A  LL  M    + PD+VT  ++IN + K
Sbjct: 483 QEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVK 542

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            G    A +V N ML  G+     TY  LIH     + +D+A      ML+     +  +
Sbjct: 543 NGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVIT 602

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+ +++G C     +   K  DE   +G+  +   Y  LI   C     + A RL+  M 
Sbjct: 603 YNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREML 662

Query: 506 GNGILGDSVIYT 517
              I  DS  ++
Sbjct: 663 DRKIQPDSFTHS 674



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 85/313 (27%), Positives = 140/313 (44%), Gaps = 37/313 (11%)

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
           Y       +   +FD+++  +L+P +     L++ L      D   ++ K+M   G+  +
Sbjct: 365 YCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPD 424

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
           I  Y +L++ C K   V        EM  K ++ D F YNT I    K      A ++Q+
Sbjct: 425 IFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQE 484

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRAN 317
            M   G  PD++TYN  +H  C++G   EA  L  ++   G  P+HVTYT++I+G+ +  
Sbjct: 485 EMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNG 544

Query: 318 DLEEALRLREVMAAKGVYPGVVTY-----------------------------------N 342
            L +A  +   M +KGV P VVTY                                   N
Sbjct: 545 HLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYN 604

Query: 343 SILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEA 402
           +I+  LC   R+ +A +  +EM EK I P+  +   LIN  C +G    A+++   ML+ 
Sbjct: 605 AIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDR 664

Query: 403 GLMLDQFTYKALI 415
            +  D FT+   +
Sbjct: 665 KIQPDSFTHSVFL 677



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 86/296 (29%), Positives = 132/296 (44%), Gaps = 2/296 (0%)

Query: 251 HYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTT 308
           H   L V D+M R G+ PD+   N ++     E  + +A+ ++  ++  G  P  VTY T
Sbjct: 161 HVXCLLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNT 220

Query: 309 LIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKK 368
           ++D YC+   +++AL L   M  +G YP  VTYN ++  L K+G +  A  L+ EM    
Sbjct: 221 MLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSG 280

Query: 369 IAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAK 428
           +     T N LIN +C+ G    A  +   M+         TY  L++G CK  ++   +
Sbjct: 281 LNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVR 340

Query: 429 ELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRF 488
                ML + F+P   S++ L+ GYC          L DE   R L   V  Y  LI   
Sbjct: 341 LRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGL 400

Query: 489 CKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL 544
           C    +D A RL   M   G+  D   YT L    ++ G         ++M  + L
Sbjct: 401 CMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGL 456



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 69/225 (30%), Positives = 111/225 (49%)

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M   G+ P V   N ILR L  E  +  A  +   M +  I P  VT NT++++YCK G 
Sbjct: 171 MIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGR 230

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
              A+++ + M E G   +  TY  L++G  K  E++ AK L+  ML++G + S  +Y+ 
Sbjct: 231 VDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNP 290

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG 508
           L++G+C K        L++E V+R     +S Y  L+   CK  +V   +  F+ M  + 
Sbjct: 291 LINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSK 350

Query: 509 ILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRS 553
              D V + SL Y Y R G       + D++  R L+ T+  Y +
Sbjct: 351 FTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNT 395



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 57/232 (24%), Positives = 104/232 (44%), Gaps = 25/232 (10%)

Query: 56  IPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIA----LRDFLS 111
           I   S AF    E     +   + ++   +H L +  +F+ A ++LE +     + D ++
Sbjct: 473 IADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVT 532

Query: 112 TPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVL 171
             S++N  VK       N H+              +   +VF++M    + P +   TVL
Sbjct: 533 YTSIINGFVK-------NGHL--------------RKAREVFNEMLSKGVAPSVVTYTVL 571

Query: 172 LNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDV 231
           +++ A  ++ D+ +  + KM++  V AN+  YN +I+  C +  +D+  K   EME K +
Sbjct: 572 IHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGI 631

Query: 232 RADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCRE 283
             + F+Y  LI   C  G   EAL +   M    I PD  T++  +    R+
Sbjct: 632 LPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNLHRD 683


>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 644

 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 132/442 (29%), Positives = 208/442 (47%), Gaps = 37/442 (8%)

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
           Y +     D L  F++M   +  P +     +L S+ K +    V  + +KM   G+  N
Sbjct: 49  YLHFNTLDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHN 108

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
           ++  NVLI++ C  + V+    +L ++     + D  ++ TLI   C +G   EAL + D
Sbjct: 109 VYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFD 168

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGAT--PNHVTYTTLIDGYCRAN 317
           +M  EG  PD+V Y +LI+G C+ G    A RL R ++     P+ V Y TLI   C+  
Sbjct: 169 KMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDR 228

Query: 318 DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCN 377
              +A  L   M  KG+ P +VT NS++  LC  G  +  N LLNEM + KI P+ ++  
Sbjct: 229 QQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLT 288

Query: 378 TLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA 437
           T+++A CK G  A A  V + M ++G+  D  TY ALI G C   EMD A ++   M+  
Sbjct: 289 TVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHK 348

Query: 438 GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSR--------------GLC-------- 475
           G +P+  SY+ L++GYC     +  + L +E   +              GLC        
Sbjct: 349 GCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDA 408

Query: 476 -------------VDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYA 522
                         D+  YR L+   CK   +D A  L   ++G+ +  D  IYT +   
Sbjct: 409 IALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDG 468

Query: 523 YWRAGEPKACSDILDDMYRRRL 544
             RAGE +   D+  ++  + L
Sbjct: 469 MCRAGELEDARDLFSNLSSKGL 490



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 118/431 (27%), Positives = 200/431 (46%), Gaps = 4/431 (0%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           SVL  ++K+   PD  S   + L+          + L +FD+M      P +     L+N
Sbjct: 130 SVLAKILKLGCQPDTAS--FTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLIN 187

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
            L K   T    ++ + M +     ++ +Y  LIH+ CK     +   L  EM  K +  
Sbjct: 188 GLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISP 247

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           ++ T N+L+   C  G       + + M    I P+ ++  +++   C+EG + +A  + 
Sbjct: 248 NIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVV 307

Query: 294 RDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
             +   G  P+ VTYT LIDG+C  ++++EA+++ ++M  KG  P V +YN+++   CK 
Sbjct: 308 DMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKI 367

Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
            R+  A  L  EM  +K+ P+ VT NTLI+  C +G    A+ +   M+  G + D  TY
Sbjct: 368 ERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTY 427

Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
           + L+   CK   +D A  LL  +  +   P    Y+ ++DG C     E    L     S
Sbjct: 428 RILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSS 487

Query: 472 RGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKA 531
           +GL  +V  Y  +    CK+  +D A +LF  M  N    D   Y ++   + R  E   
Sbjct: 488 KGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQGFLRNNETSR 547

Query: 532 CSDILDDMYRR 542
              +L++M  R
Sbjct: 548 AIQLLEEMLAR 558



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 137/504 (27%), Positives = 221/504 (43%), Gaps = 35/504 (6%)

Query: 46  VLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIA 105
           VL+N +  CH+  ++ AF   A+      +    S  T+I  L        A ++ +K+ 
Sbjct: 114 VLINSF--CHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMI 171

Query: 106 LRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANL-------KMTQDGLQVFDQMRV 158
              F                PD         V+ YA L         T   +++   M  
Sbjct: 172 WEGF---------------QPD---------VVIYATLINGLCKTGHTSAAIRLLRSMEK 207

Query: 159 HNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDK 218
            N  P +     L++SL KDR     + ++ +M+  G+  NI   N L++A C   +   
Sbjct: 208 GNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKH 267

Query: 219 VEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIH 278
           V  LL EM    +  +  +  T++   CK+GM  +A  V D M + G+ PD+VTY +LI 
Sbjct: 268 VNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALID 327

Query: 279 GFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYP 336
           G C    M EA ++F  +  KG  PN  +Y TLI+GYC+   +++A+ L E M  + + P
Sbjct: 328 GHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIP 387

Query: 337 GVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVK 396
             VTYN+++  LC  GR++DA  L  EM      PD VT   L++  CK      AM + 
Sbjct: 388 NTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALL 447

Query: 397 NRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNK 456
             +  + L  D   Y  +I G C+A E++ A++L   +   G  P+  +Y+ +  G C +
Sbjct: 448 KAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKR 507

Query: 457 NNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIY 516
              +   KL  E        D   Y  + + F +  +   A +L   M   G   D    
Sbjct: 508 GLLDEATKLFMEMDENACSADGCTYNTITQGFLRNNETSRAIQLLEEMLARGFSCDVSTT 567

Query: 517 TSLAYAYWRAGEPKACSDILDDMY 540
           T L       G  ++ +  L+DM+
Sbjct: 568 TLLVGMLSDDGLDQSEAHKLEDMF 591



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 79/310 (25%), Positives = 134/310 (43%), Gaps = 2/310 (0%)

Query: 253 EALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYT--TLI 310
           +AL+  +RM      P IV +  ++    +  R      L R +      H  YT   LI
Sbjct: 57  DALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTLNVLI 116

Query: 311 DGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIA 370
           + +C  N +  A  +   +   G  P   ++ ++++ LC EG+I +A  L ++M  +   
Sbjct: 117 NSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQ 176

Query: 371 PDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL 430
           PD V   TLIN  CK G T++A+++   M +     D   Y  LIH  CK ++   A  L
Sbjct: 177 PDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNL 236

Query: 431 LFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCK 490
              M+  G SP+  + + LV   CN    + +  LL+E V   +  +      ++   CK
Sbjct: 237 FSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCK 296

Query: 491 KEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKI 550
           +  V  A  + ++M  +G+  D V YT+L   +    E      + D M  +     +  
Sbjct: 297 EGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFS 356

Query: 551 YRSFSASYAK 560
           Y +    Y K
Sbjct: 357 YNTLINGYCK 366



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 48/219 (21%), Positives = 87/219 (39%), Gaps = 5/219 (2%)

Query: 354 IRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKA 413
           + DA    N M      P  V    ++ +  K+   ++ + +  +M   G+  + +T   
Sbjct: 55  LDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTLNV 114

Query: 414 LIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
           LI+ FC    ++ A  +L  +L  G  P   S++ L+ G C +      L L D+ +  G
Sbjct: 115 LINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEG 174

Query: 474 LCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACS 533
              DV +Y  LI   CK      A RL   M+      D V+Y +L ++  +  +     
Sbjct: 175 FQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAF 234

Query: 534 DILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHV 572
           ++  +M  + +   +    S   +     E     W HV
Sbjct: 235 NLFSEMITKGISPNIVTCNSLVYALCNLGE-----WKHV 268


>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 744

 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 119/431 (27%), Positives = 209/431 (48%), Gaps = 4/431 (0%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           SVL  ++K+   PD  +   + L+          + L +FD+M      P++     L+N
Sbjct: 112 SVLAKILKLGHQPDPTT--FTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLIN 169

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
            L K   T    ++ + M Q     ++ +Y  +I + CK   V +   L  +M  + +  
Sbjct: 170 GLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISP 229

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           D+FTY +L+   C          + ++M    I PD+V +++++   C+EG++ EA  + 
Sbjct: 230 DIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIV 289

Query: 294 RDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
             +  +G  P+ VTYTTL+DG+C  ++++EA+++ ++M  KG  P V++Y +++   CK 
Sbjct: 290 DMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKI 349

Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
            +I  A  L  EM  K+  PD  T NTL++  C +G    A+ + + M+  G M D  TY
Sbjct: 350 HKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTY 409

Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
             L+   CK   ++ A  LL  +  +  +P    Y+ ++DG C     EA   L     S
Sbjct: 410 SILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSS 469

Query: 472 RGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKA 531
           +GL   V  Y  +I   CK+  ++ A +LF  M GN    D   Y ++A  + +  E   
Sbjct: 470 KGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLR 529

Query: 532 CSDILDDMYRR 542
              +L++M  R
Sbjct: 530 AIQLLEEMLAR 540



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 137/519 (26%), Positives = 242/519 (46%), Gaps = 37/519 (7%)

Query: 13  FIKTISAIMLKGHWAKLLNPNIASSLTSTAIHK------VLLNLYNCCHIPSLSCAFFKW 66
           F K +++I    H++ +L+  +++ + S  +        +L+N +  CH+  +  AF   
Sbjct: 59  FAKLLTSIAKMKHYSTVLS--LSTQMDSFGVPPNVYTLNILINSF--CHLNRVGFAFSVL 114

Query: 67  AESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDF----LSTPSVLNALVKI 122
           A+     ++    +  T+I  L        A ++ +K+    F    ++  +++N L K+
Sbjct: 115 AKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKV 174

Query: 123 HDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTD 182
                GN                T   +++   M   N  P +   T +++SL KDR   
Sbjct: 175 -----GN----------------TSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVT 213

Query: 183 MVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLI 242
             + ++ +MV  G+  +I  Y  L+HA C   +   V  LL +M    +  D+  ++T++
Sbjct: 214 EAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVV 273

Query: 243 ALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGAT 300
              CK+G   EA  + D M + G+ PD+VTY +L+ G C +  M EA ++F  +  KG  
Sbjct: 274 DALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFA 333

Query: 301 PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRL 360
           P+ ++YTTLI+GYC+ + +++A+ L E M  K   P   TYN+++  LC  GR++DA  L
Sbjct: 334 PDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIAL 393

Query: 361 LNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCK 420
            +EM  +   PD VT + L+++ CK      AM +   +  + L  D   Y  +I G C+
Sbjct: 394 FHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCR 453

Query: 421 AKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSV 480
           A E++ A++L   +   G  PS  +Y+ ++ G C +       KL  E        D   
Sbjct: 454 AGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCT 513

Query: 481 YRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
           Y  + R F +  +   A +L   M   G   D    T L
Sbjct: 514 YNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLL 552



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 120/441 (27%), Positives = 207/441 (46%), Gaps = 37/441 (8%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D L  F+++   +  P +     LL S+AK +    V  +  +M   GV  N++  N+LI
Sbjct: 39  DALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILI 98

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           ++ C  + V     +L ++     + D  T+ TLI   C +G   EAL + D+M  EG  
Sbjct: 99  NSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQ 158

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDIKGAT--PNHVTYTTLIDGYCRANDLEEALRL 325
           P++VTY +LI+G C+ G    A RL R ++     P+ V YT++ID  C+   + EA  L
Sbjct: 159 PNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNL 218

Query: 326 REVMAAKGVYPGVVTYNS-----------------------------------ILRKLCK 350
              M  +G+ P + TY S                                   ++  LCK
Sbjct: 219 FSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCK 278

Query: 351 EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
           EG++ +A+ +++ M ++ + PD VT  TL++ +C   +   A+KV + M+  G   D  +
Sbjct: 279 EGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVIS 338

Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFV 470
           Y  LI+G+CK  ++D A  L   M    + P   +Y+ L+ G C+    +  + L  E V
Sbjct: 339 YTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMV 398

Query: 471 SRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPK 530
           +RG   D+  Y  L+   CK   ++ A  L   ++ + +  D  +Y  +     RAGE +
Sbjct: 399 ARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELE 458

Query: 531 ACSDILDDMYRRRLMITLKIY 551
           A  D+  ++  + L  ++  Y
Sbjct: 459 AARDLFSNLSSKGLHPSVWTY 479



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 105/376 (27%), Positives = 182/376 (48%), Gaps = 2/376 (0%)

Query: 188 YKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCK 247
           + +++ +    +I  +  L+ +  K      V  L  +M+   V  +++T N LI  +C 
Sbjct: 44  FNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCH 103

Query: 248 KGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVT 305
                 A +V  ++ + G  PD  T+ +LI G C EG++ EA  LF  +  +G  PN VT
Sbjct: 104 LNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVT 163

Query: 306 YTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMN 365
           Y TLI+G C+  +   A+RL   M      P VV Y SI+  LCK+ ++ +A  L ++M 
Sbjct: 164 YGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMV 223

Query: 366 EKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMD 425
            + I+PD  T  +L++A C + +      + N+M+ + ++ D   +  ++   CK  ++ 
Sbjct: 224 GQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVT 283

Query: 426 IAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
            A E++  M+  G  P   +Y+ L+DG+C ++  +  +K+ D  V +G   DV  Y  LI
Sbjct: 284 EAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLI 343

Query: 486 RRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
             +CK  K+D A  LF  M     + D+  Y +L +     G  +    +  +M  R  M
Sbjct: 344 NGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQM 403

Query: 546 ITLKIYRSFSASYAKD 561
             L  Y     S  K+
Sbjct: 404 PDLVTYSILLDSLCKN 419



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 91/302 (30%), Positives = 153/302 (50%), Gaps = 2/302 (0%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           + +QM    ++P +   + ++++L K+       ++   M+Q GV  ++  Y  L+   C
Sbjct: 253 LLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHC 312

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
             S++D+  K+   M  K    D+ +Y TLI  YCK     +A+ + + M R+   PD  
Sbjct: 313 LQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTK 372

Query: 272 TYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           TYN+L+HG C  GR+++A  LF ++  +G  P+ VTY+ L+D  C+   LEEA+ L + +
Sbjct: 373 TYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAI 432

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
            A  + P +  YN I+  +C+ G +  A  L + ++ K + P   T N +I+  CK G  
Sbjct: 433 EASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLL 492

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
             A K+   M       D  TY  +  GF +  E   A +LL  ML  GFS    + + L
Sbjct: 493 NEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLL 552

Query: 450 VD 451
           V+
Sbjct: 553 VE 554



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 90/345 (26%), Positives = 158/345 (45%), Gaps = 18/345 (5%)

Query: 248 KGMHY----EALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR--DIKGATP 301
           K +H+    +AL+  +R+      P IV +  L+    +         L    D  G  P
Sbjct: 30  KSLHFNTLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPP 89

Query: 302 NHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLL 361
           N  T   LI+ +C  N +  A  +   +   G  P   T+ +++R LC EG+I +A  L 
Sbjct: 90  NVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLF 149

Query: 362 NEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKA 421
           ++M ++   P+ VT  TLIN  CK+G+T++A+++   M +     D   Y ++I   CK 
Sbjct: 150 DKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKD 209

Query: 422 KEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVY 481
           +++  A  L   M+  G SP   +Y+ LV   CN    + +  LL++ V+  +  DV ++
Sbjct: 210 RQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIF 269

Query: 482 RALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
             ++   CK+ KV  A  + ++M   G+  D V YT+L   +    E      + D M R
Sbjct: 270 STVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVR 329

Query: 542 RRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKEM 586
           +     +  Y +    Y K          H +D+ +   ++F+EM
Sbjct: 330 KGFAPDVISYTTLINGYCK---------IHKIDKAM---YLFEEM 362



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 121/241 (50%), Gaps = 6/241 (2%)

Query: 115 VLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNS 174
           V + +V+    PD  S+  + L+  Y  +      + +F++M     +P       L++ 
Sbjct: 323 VFDMMVRKGFAPDVISY--TTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHG 380

Query: 175 LAK-DRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
           L    RL D +  ++ +MV  G + ++  Y++L+ + CK+  +++   LL  +E  ++  
Sbjct: 381 LCHVGRLQDAI-ALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNP 439

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           D+  YN +I   C+ G    A  +   +  +G+ P + TYN +IHG C+ G + EA +LF
Sbjct: 440 DIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLF 499

Query: 294 RDIKG--ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
            ++ G   +P+  TY T+  G+ + N+   A++L E M A+G    V T   ++  L  +
Sbjct: 500 MEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLVEMLSDD 559

Query: 352 G 352
           G
Sbjct: 560 G 560



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 46/245 (18%), Positives = 101/245 (41%), Gaps = 27/245 (11%)

Query: 44  HKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSA----QN 99
           +  L+N Y  C I  +  A + + E     +    +++ T++H L      + A      
Sbjct: 339 YTTLINGY--CKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHE 396

Query: 100 MLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVH 159
           M+ +  + D ++   +L++L K       N H+              ++ + +   +   
Sbjct: 397 MVARGQMPDLVTYSILLDSLCK-------NCHL--------------EEAMALLKAIEAS 435

Query: 160 NLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKV 219
           NL P +    ++++ + +    +    ++  +   G+  ++  YN++IH  CK   +++ 
Sbjct: 436 NLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEA 495

Query: 220 EKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHG 279
            KL  EM+  D   D  TYNT+   + +      A+ + + M   G S D+ T   L+  
Sbjct: 496 NKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLVEM 555

Query: 280 FCREG 284
              +G
Sbjct: 556 LSDDG 560


>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
           sativus]
          Length = 686

 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 123/405 (30%), Positives = 209/405 (51%), Gaps = 11/405 (2%)

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
           +  +K   D + +F  M     +P +     L+  + +    D+V  ++KKM  L +  N
Sbjct: 56  FHEIKGLDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMPCN 115

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
            + + +L+   C  S +        ++        + T+NTL+   C +    EAL +  
Sbjct: 116 AYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFH 175

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREA----RRLFRDIKGATPNHVTYTTLIDGYCR 315
           +M +    P++VT+ +L++G CREGR+ EA     R+  D  G  PN +TY T++DG C+
Sbjct: 176 QMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMLED--GLQPNQITYGTIVDGMCK 229

Query: 316 ANDLEEALR-LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNV 374
             D   AL  LR++     + P VV YN+I+  L K+GR  DA+ L  EM EK+I PD V
Sbjct: 230 MGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIV 289

Query: 375 TCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGM 434
           T N +IN +C  G  + A ++   MLE  +  D  T+ ALI+ F K  +   A+EL   M
Sbjct: 290 TYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEM 349

Query: 435 LDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKV 494
           L     PS  +YS ++DG+C +N  +A   +     ++G   D+  +  LI  +C+ ++V
Sbjct: 350 LPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRV 409

Query: 495 DYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
           D   +L + M   G++ +++ YT+L + + + G+  A  D+L +M
Sbjct: 410 DDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEM 454



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 131/549 (23%), Positives = 239/549 (43%), Gaps = 63/549 (11%)

Query: 54  CHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTP 113
           C    L  A   + +     +  ++ +  T++H L        A ++  ++   + ++  
Sbjct: 127 CSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQMCKPNVVTFT 186

Query: 114 SVLNALVK--------------IHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMR-V 158
           +++N L +              + D    N      +V     +  T   L +  +M  V
Sbjct: 187 TLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEV 246

Query: 159 HNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDK 218
            +++P++     +++ L KD        ++ +M +  +  +I  YN +I+  C S     
Sbjct: 247 SHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSD 306

Query: 219 VEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIH 278
            E+LL EM  + +  D+ T++ LI  + K+G  +EA  + D M    I P  VTY+S+I 
Sbjct: 307 AEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMID 366

Query: 279 GFCREGRMREARRLF--RDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYP 336
           GFC++ R+  A  +F     KG +P+ +T+ TLI GYCRA  +++ ++L   M   G+  
Sbjct: 367 GFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVA 426

Query: 337 GVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKV- 395
             +TY +++   C+ G +  A  LL EM    + P+ VTCNTL++  C  G    A+++ 
Sbjct: 427 NTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMF 486

Query: 396 -----------------------------------KNRMLEA----------GLMLDQFT 410
                                              + + LEA          G++ D  T
Sbjct: 487 KAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTIT 546

Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFV 470
           Y ++I G CK   +D A ++   M    FSP   +++ L+ GYC     +  L+L  E  
Sbjct: 547 YSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMG 606

Query: 471 SRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPK 530
            RG+  D   Y  LI  F K + +D A  +F  M  +G+  D++   ++    W   E +
Sbjct: 607 QRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELE 666

Query: 531 ACSDILDDM 539
               +L+D+
Sbjct: 667 RAVAMLEDL 675



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 122/435 (28%), Positives = 211/435 (48%), Gaps = 13/435 (2%)

Query: 162 MP-HLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVE 220
           MP + ++ T+L+               + K+ +LG    +  +N L+H  C    + +  
Sbjct: 112 MPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEAL 171

Query: 221 KLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGF 280
            L  +M     + ++ T+ TL+   C++G   EA+A+ DRM  +G+ P+ +TY +++ G 
Sbjct: 172 DLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGM 227

Query: 281 CREGRMREARRLFRDIKGAT---PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPG 337
           C+ G    A  L R ++  +   PN V Y T+IDG  +     +A  L   M  K ++P 
Sbjct: 228 CKMGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPD 287

Query: 338 VVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKN 397
           +VTYN ++   C  GR  DA +LL EM E+KI PD VT + LINA+ K G    A ++ +
Sbjct: 288 IVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYD 347

Query: 398 RMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKN 457
            ML   ++    TY ++I GFCK   +D A+ + +     G SP   +++ L+ GYC   
Sbjct: 348 EMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAK 407

Query: 458 NEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYT 517
             +  +KLL E    GL  +   Y  LI  FC+   ++ AQ L   M  +G+  + V   
Sbjct: 408 RVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCN 467

Query: 518 SLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRG- 576
           +L       G+ K   ++   M + ++ I     R F+     D +  ++    +++ G 
Sbjct: 468 TLLDGLCDNGKLKDALEMFKAMQKSKMDIDAS--RPFNG-VEPDVQTYNILICGLINEGK 524

Query: 577 -LMSKHIFKEMQLRN 590
            L ++ +++EM  R 
Sbjct: 525 FLEAEELYEEMPHRG 539



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 128/457 (28%), Positives = 218/457 (47%), Gaps = 30/457 (6%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           + L +F QM      P++   T L+N L ++        +  +M++ G+  N   Y  ++
Sbjct: 169 EALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIV 224

Query: 208 HACCKSSDVDKVEKLLCEME-FKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
              CK  D      LL +ME    +  ++  YNT+I    K G H +A  +   M+ + I
Sbjct: 225 DGMCKMGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEI 284

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
            PDIVTYN +I+GFC  GR  +A +L +++  +   P+ VT++ LI+ + +     EA  
Sbjct: 285 FPDIVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEE 344

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           L + M  + + P  VTY+S++   CK+ R+  A  +      K  +PD +T NTLI  YC
Sbjct: 345 LYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYC 404

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           +       +K+ + M EAGL+ +  TY  LIHGFC+  +++ A++LL  M+ +G  P+  
Sbjct: 405 RAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVV 464

Query: 445 SYSWLVDGYCNKNNEEALLKL--------LDEFVSR---GLCVDVSVYRALIRRFCKKEK 493
           + + L+DG C+    +  L++        +D   SR   G+  DV  Y  LI     + K
Sbjct: 465 TCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGK 524

Query: 494 VDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRS 553
              A+ L+  M   GI+ D++ Y+S+     +       + + D M  +     +  + +
Sbjct: 525 FLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNT 584

Query: 554 FSASYAKDNEILDLFWSHVVDRGLMSKHIFKEMQLRN 590
               Y K         + +VD GL    +F EM  R 
Sbjct: 585 LITGYCK---------AGMVDDGL---ELFCEMGQRG 609



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 102/371 (27%), Positives = 174/371 (46%), Gaps = 13/371 (3%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D  Q+  +M    + P +   + L+N+  K+       ++Y +M+   ++ +   Y+ +I
Sbjct: 306 DAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMI 365

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
              CK + +D  E +      K    D+ T+NTLIA YC+     + + +   M   G+ 
Sbjct: 366 DGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLV 425

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
            + +TY +LIHGFC+ G +  A+ L +++   G  PN VT  TL+DG C    L++AL +
Sbjct: 426 ANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEM 485

Query: 326 REVMAAK-----------GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNV 374
            + M              GV P V TYN ++  L  EG+  +A  L  EM  + I PD +
Sbjct: 486 FKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTI 545

Query: 375 TCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGM 434
           T +++I+  CK      A ++ + M       D  T+  LI G+CKA  +D   EL   M
Sbjct: 546 TYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEM 605

Query: 435 LDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKV 494
              G      +Y  L+ G+   +N +  L +  E +S G+  D    R ++     KE++
Sbjct: 606 GQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGLWSKEEL 665

Query: 495 DYAQRLFNLMQ 505
           + A  +   +Q
Sbjct: 666 ERAVAMLEDLQ 676



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 47/244 (19%), Positives = 97/244 (39%), Gaps = 5/244 (2%)

Query: 309 LIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKK 368
           L  G+     L++A+ L   M      P V+ +  ++  + + GR      L  +M   +
Sbjct: 52  LQSGFHEIKGLDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLR 111

Query: 369 IAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAK 428
           +  +  +   L+  +C       A+    ++ + G      T+  L+HG C    +  A 
Sbjct: 112 MPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEAL 171

Query: 429 ELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRF 488
           +L   M      P+  +++ L++G C +      + LLD  +  GL  +   Y  ++   
Sbjct: 172 DLFHQMC----KPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGM 227

Query: 489 CKKEKVDYAQRLFNLMQG-NGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMIT 547
           CK      A  L   M+  + I+ + VIY ++    W+ G      ++  +M  + +   
Sbjct: 228 CKMGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPD 287

Query: 548 LKIY 551
           +  Y
Sbjct: 288 IVTY 291


>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
 gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
          Length = 737

 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 136/524 (25%), Positives = 238/524 (45%), Gaps = 24/524 (4%)

Query: 79  QSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSW--- 135
           Q+    + +L  ++ F+ A   L +     +L  PSV+  +++  DD D       W   
Sbjct: 68  QAAKEFLRVLDSSEDFELASRRLCEFG--GYL-VPSVVGRVLQQLDDLDKAVKFFDWCTG 124

Query: 136 -------------LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTD 182
                        L+  +   K  Q+   +F   R     P     + L+N   K R   
Sbjct: 125 QPGYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTLINGFCKARDFQ 184

Query: 183 MVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLI 242
             +++  +M + G+V +  +YN +I   C +  VD       +M+ ++    + TY  L+
Sbjct: 185 QAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQ-RNCAPSVITYTILV 243

Query: 243 ALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGAT 300
              CK     +A  + + M   G +P++VTYN+LI+GFC+ G M EA  LF  +     +
Sbjct: 244 DALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCS 303

Query: 301 PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRL 360
           P+  TY  LIDGYC+    ++  +L + M   G  P  +TYN+++  L K G+  DA  L
Sbjct: 304 PDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNL 363

Query: 361 LNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCK 420
              M  +   P + T N +I+ +CK+G    A ++   M + G + D +TY  +I G C+
Sbjct: 364 AQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACR 423

Query: 421 AKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSV 480
           A  +D A++LL  M +AG  P   +Y+ +V G C  +  +   ++ +   + G  +DV  
Sbjct: 424 ANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVT 483

Query: 481 YRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMY 540
              LI   CK  ++D A++L   M+ NG   D V YT L + + +A +         +M 
Sbjct: 484 CSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEML 543

Query: 541 RRRLMITLKIYRSFSASYAKDNEILD--LFWSHVVDRGLMSKHI 582
            +  + T+  Y        K   + D  +    +++RG+    I
Sbjct: 544 DKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAI 587



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 116/395 (29%), Positives = 194/395 (49%), Gaps = 2/395 (0%)

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           L+  +  L    + + +F+QM  ++  P +    +L++   K        K+ ++MV+ G
Sbjct: 277 LINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYG 336

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
              N   YN L+ +  KS        L   M  +D +   FT+N +I ++CK G    A 
Sbjct: 337 CEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAY 396

Query: 256 AVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGY 313
            +   M   G  PDI TYN +I G CR  R+ +AR+L   +   G  P+ VTY +++ G 
Sbjct: 397 ELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGL 456

Query: 314 CRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDN 373
           C+A+ ++EA  + EV+   G +  VVT ++++  LCK  R+ DA +LL EM     APD 
Sbjct: 457 CKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDV 516

Query: 374 VTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFG 433
           V    LI+ +CK      ++   + ML+ G +    TY  +I   CK+  +     LL  
Sbjct: 517 VAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKT 576

Query: 434 MLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEK 493
           ML+ G +P    Y+ ++DG C  ++ +   +L       G    V  Y  L+ + CK  +
Sbjct: 577 MLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSR 636

Query: 494 VDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
           +D A  L  +M+ +G L D+V Y S+   +W++ E
Sbjct: 637 LDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAE 671



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 100/357 (28%), Positives = 176/357 (49%), Gaps = 2/357 (0%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D   +   M   +  P      ++++   K    D+ +++++ M   G + +I+ YN++I
Sbjct: 359 DAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMI 418

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
              C+++ +D   +LL  M       D+ TYN++++  CK     EA  V + +   G  
Sbjct: 419 SGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYF 478

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRL 325
            D+VT ++LI G C+  R+ +A +L R+++  G+ P+ V YT LI G+C+A+ L+++L  
Sbjct: 479 LDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAF 538

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
              M  KG  P V+TY+ ++ KLCK  R+RD   LL  M E+ + PD +   ++I+  CK
Sbjct: 539 FSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCK 598

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
                 A ++   M + G      TY  L+   CK   +D A  LL  M   G  P   +
Sbjct: 599 SDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVT 658

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
           Y+ + DG+      +   +L     SRG      +Y  L+ +   +EK+D A  ++ 
Sbjct: 659 YNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVAEEKMDQAMEIWE 715



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 107/386 (27%), Positives = 183/386 (47%), Gaps = 2/386 (0%)

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           L+  Y   +  QDG ++  +M  +   P+      L++SL K       + + + M++  
Sbjct: 312 LIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRD 371

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
              +   +N++I   CK   +D   +L   M  +    D++TYN +I+  C+     +A 
Sbjct: 372 CKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDAR 431

Query: 256 AVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGY 313
            + +RM   G  PD+VTYNS++ G C+  ++ EA  ++  ++  G   + VT +TLIDG 
Sbjct: 432 QLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGL 491

Query: 314 CRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDN 373
           C++  L++A +L   M   G  P VV Y  ++   CK  ++  +    +EM +K   P  
Sbjct: 492 CKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTV 551

Query: 374 VTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFG 433
           +T + +I+  CK         +   MLE G+  D   Y ++I G CK+   D A EL   
Sbjct: 552 ITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKL 611

Query: 434 MLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEK 493
           M   G +P+  +Y+ LVD  C  +  +  + LL+   S G   D   Y ++   F K  +
Sbjct: 612 MKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAE 671

Query: 494 VDYAQRLFNLMQGNGILGDSVIYTSL 519
            D A RLF  M+  G      +Y+ L
Sbjct: 672 HDKAFRLFQAMKSRGCSPTPFMYSLL 697



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 91/336 (27%), Positives = 161/336 (47%), Gaps = 2/336 (0%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           ++F  M     +P ++   ++++   +    D   ++ ++M + G   ++  YN ++   
Sbjct: 397 ELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGL 456

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           CK+S VD+  ++   +       D+ T +TLI   CK     +A  +   MER G +PD+
Sbjct: 457 CKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDV 516

Query: 271 VTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
           V Y  LIHGFC+  ++ ++   F ++  KG  P  +TY+ +ID  C++  + +   L + 
Sbjct: 517 VAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKT 576

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M  +GV P  + Y S++  LCK     +A  L   M +   AP  VT N L++  CK+  
Sbjct: 577 MLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSR 636

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
              A+ +   M   G + D  TY ++  GF K+ E D A  L   M   G SP+   YS 
Sbjct: 637 LDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSL 696

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRAL 484
           L+     +   +  +++ +E +  G  VD  + R L
Sbjct: 697 LLTKLVAEEKMDQAMEIWEEALEAGADVDPEISRTL 732



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 58/233 (24%), Positives = 97/233 (41%), Gaps = 22/233 (9%)

Query: 83  TMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIH-----DDPDGNSHVLSWL- 136
           T+I  L K++    A+ +L ++      S P V+   + IH     D  D +    S + 
Sbjct: 486 TLIDGLCKSRRLDDAEKLLREMERNG--SAPDVVAYTILIHGFCKADQLDKSLAFFSEML 543

Query: 137 -------VIFYANL-------KMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTD 182
                  VI Y+ +          +DG  +   M    + P     T +++ L K    D
Sbjct: 544 DKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYD 603

Query: 183 MVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLI 242
             +++YK M Q G    +  YNVL+   CK S +D+   LL  ME      D  TYN++ 
Sbjct: 604 EAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVF 663

Query: 243 ALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD 295
             + K   H +A  +   M+  G SP    Y+ L+     E +M +A  ++ +
Sbjct: 664 DGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVAEEKMDQAMEIWEE 716


>gi|297840249|ref|XP_002888006.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297333847|gb|EFH64265.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 485

 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 124/395 (31%), Positives = 199/395 (50%), Gaps = 9/395 (2%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           + +F  M +  +   L+   +++N L +     +   V  KM++ G   ++   + LI+ 
Sbjct: 89  ISLFHNMEICGIGHDLYTYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLING 148

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
            C+ + V     L+ +ME    + D+  YNT+I  +CK G+   AL +  RMER+G+  D
Sbjct: 149 FCQGNRVFGAVDLVSKMEEMRCKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRAD 208

Query: 270 IVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEALRLRE 327
            VTYNSL+ G C  GR  +A RL RD  ++   PN +T+T LI+ + R     EA +  E
Sbjct: 209 TVTYNSLVTGLCCSGRRSDAARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYE 268

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
            M  + + P V TYNS++  LC  G++ +A ++L+ M  K   PD VT NTLIN +CK  
Sbjct: 269 EMIRRCIDPDVFTYNSMIHGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTK 328

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
                 K+   M + GL++D  T+  +I G+ +A   D A+E+   M   G  P+  +YS
Sbjct: 329 RVDEGTKLVREMSQRGLVVDTVTFNTIIQGYFQAGRPDAAQEIFSRM---GSRPNIRTYS 385

Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGN 507
            L+ G C     E  L L +      + +D++ Y  +I   C    V+ A  LF  +   
Sbjct: 386 ILLYGLCYNWRVEKALVLFESMQKSEMELDITTYNIVIHGMCMIGNVEDAWDLFCSLSFK 445

Query: 508 GILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRR 542
           G+  D V YT++   + R    K   D  D +YR+
Sbjct: 446 GLEPDVVTYTTMISGFCR----KRLWDKADFLYRK 476



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 114/348 (32%), Positives = 177/348 (50%), Gaps = 4/348 (1%)

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
           D    ++  M+Q   + +I  ++ L+    KS + D V  L   ME   +  DL+TYN +
Sbjct: 51  DEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNIV 110

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKG--A 299
           I   C+      AL+V  +M + G  PD+VT +SLI+GFC+  R+  A  L   ++    
Sbjct: 111 INCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMRC 170

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
             + V Y T+IDG+C+   +  AL L   M   GV    VTYNS++  LC  GR  DA R
Sbjct: 171 KLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAAR 230

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
           L+ +M  + I P+ +T   LINA+ + G    A K    M+   +  D FTY ++IHG C
Sbjct: 231 LMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLC 290

Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
              ++D AK++L  M+  G  P   +Y+ L++G+C     +   KL+ E   RGL VD  
Sbjct: 291 MHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTV 350

Query: 480 VYRALIRRFCKKEKVDYAQRLFNLMQGN-GILGDSVIYTSLAYAYWRA 526
            +  +I+ + +  + D AQ +F+ M     I   S++   L Y  WR 
Sbjct: 351 TFNTIIQGYFQAGRPDAAQEIFSRMGSRPNIRTYSILLYGLCYN-WRV 397



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 91/332 (27%), Positives = 157/332 (47%), Gaps = 2/332 (0%)

Query: 213 SSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVT 272
           S ++D+   L C M        +  ++ L++   K   +   +++   ME  GI  D+ T
Sbjct: 47  SMNLDEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYT 106

Query: 273 YNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMA 330
           YN +I+  CR  R   A  +   +   G  P+ VT ++LI+G+C+ N +  A+ L   M 
Sbjct: 107 YNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKME 166

Query: 331 AKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTA 390
                  VV YN+I+   CK G + +A  L   M    +  D VT N+L+   C  G  +
Sbjct: 167 EMRCKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRS 226

Query: 391 SAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLV 450
            A ++   M+   ++ +  T+ ALI+ F +  +   AK+    M+     P   +Y+ ++
Sbjct: 227 DAARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMI 286

Query: 451 DGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGIL 510
            G C     +   ++LD  V++G   DV  Y  LI  FCK ++VD   +L   M   G++
Sbjct: 287 HGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLV 346

Query: 511 GDSVIYTSLAYAYWRAGEPKACSDILDDMYRR 542
            D+V + ++   Y++AG P A  +I   M  R
Sbjct: 347 VDTVTFNTIIQGYFQAGRPDAAQEIFSRMGSR 378



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 90/284 (31%), Positives = 142/284 (50%), Gaps = 11/284 (3%)

Query: 165 LHACTVLLNSLA-----KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKV 219
           + A TV  NSL        R +D   ++ + MV   +V N+  +  LI+A  +     + 
Sbjct: 205 VRADTVTYNSLVTGLCCSGRRSDAA-RLMRDMVMRDIVPNVITFTALINAFVREGKFLEA 263

Query: 220 EKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHG 279
           +K   EM  + +  D+FTYN++I   C  G   EA  + D M  +G  PD+VTYN+LI+G
Sbjct: 264 KKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLING 323

Query: 280 FCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPG 337
           FC+  R+ E  +L R++  +G   + VT+ T+I GY +A   + A   +E+ +  G  P 
Sbjct: 324 FCKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQGYFQAGRPDAA---QEIFSRMGSRPN 380

Query: 338 VVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKN 397
           + TY+ +L  LC   R+  A  L   M + ++  D  T N +I+  C IG+   A  +  
Sbjct: 381 IRTYSILLYGLCYNWRVEKALVLFESMQKSEMELDITTYNIVIHGMCMIGNVEDAWDLFC 440

Query: 398 RMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
            +   GL  D  TY  +I GFC+ +  D A  L   M + G  P
Sbjct: 441 SLSFKGLEPDVVTYTTMISGFCRKRLWDKADFLYRKMQEDGLLP 484



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 64/264 (24%), Positives = 114/264 (43%)

Query: 301 PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRL 360
           P+ V ++ L+    ++ + +  + L   M   G+   + TYN ++  LC+  R   A  +
Sbjct: 67  PSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNIVINCLCRCSRFVIALSV 126

Query: 361 LNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCK 420
           + +M +    PD VT ++LIN +C+      A+ + ++M E    LD   Y  +I GFCK
Sbjct: 127 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMRCKLDVVIYNTIIDGFCK 186

Query: 421 AKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSV 480
              ++ A  L   M   G      +Y+ LV G C         +L+ + V R +  +V  
Sbjct: 187 TGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAARLMRDMVMRDIVPNVIT 246

Query: 481 YRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMY 540
           + ALI  F ++ K   A++ +  M    I  D   Y S+ +     G+      ILD M 
Sbjct: 247 FTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQVDEAKQILDLMV 306

Query: 541 RRRLMITLKIYRSFSASYAKDNEI 564
            +     +  Y +    + K   +
Sbjct: 307 TKGCFPDVVTYNTLINGFCKTKRV 330



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/222 (22%), Positives = 102/222 (45%), Gaps = 2/222 (0%)

Query: 356 DANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALI 415
           +A  L   M + +  P  V  + L++   K  +    + + + M   G+  D +TY  +I
Sbjct: 52  EAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNIVI 111

Query: 416 HGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLC 475
           +  C+     IA  ++  M+  G+ P   + S L++G+C  N     + L+ +       
Sbjct: 112 NCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMRCK 171

Query: 476 VDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDI 535
           +DV +Y  +I  FCK   V+ A  LF  M+ +G+  D+V Y SL      +G     + +
Sbjct: 172 LDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAARL 231

Query: 536 LDDMYRRRLMITLKIYRSFSASYAKDNEILDL--FWSHVVDR 575
           + DM  R ++  +  + +   ++ ++ + L+   F+  ++ R
Sbjct: 232 MRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRR 273



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 76/179 (42%), Gaps = 32/179 (17%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVA------------ 198
           Q+ D M      P +     L+N   K +  D   K+ ++M Q G+V             
Sbjct: 300 QILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQGY 359

Query: 199 --------------------NIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTY 238
                               NI  Y++L++  C +  V+K   L   M+  ++  D+ TY
Sbjct: 360 FQAGRPDAAQEIFSRMGSRPNIRTYSILLYGLCYNWRVEKALVLFESMQKSEMELDITTY 419

Query: 239 NTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK 297
           N +I   C  G   +A  +   +  +G+ PD+VTY ++I GFCR+    +A  L+R ++
Sbjct: 420 NIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMISGFCRKRLWDKADFLYRKMQ 478



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/207 (20%), Positives = 91/207 (43%), Gaps = 21/207 (10%)

Query: 80  SHWTMIHILTKNKHFKSAQNMLE----KIALRDFLSTPSVLNALVKIHDDPDGNSHV--- 132
           ++ +MIH L  +     A+ +L+    K    D ++  +++N   K     +G   V   
Sbjct: 281 TYNSMIHGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREM 340

Query: 133 -----------LSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLT 181
                       + ++  Y          ++F +M      P++   ++LL  L  +   
Sbjct: 341 SQRGLVVDTVTFNTIIQGYFQAGRPDAAQEIFSRMGSR---PNIRTYSILLYGLCYNWRV 397

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
           +    +++ M +  +  +I  YN++IH  C   +V+    L C + FK +  D+ TY T+
Sbjct: 398 EKALVLFESMQKSEMELDITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTM 457

Query: 242 IALYCKKGMHYEALAVQDRMEREGISP 268
           I+ +C+K +  +A  +  +M+ +G+ P
Sbjct: 458 ISGFCRKRLWDKADFLYRKMQEDGLLP 484


>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 618

 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 119/441 (26%), Positives = 211/441 (47%), Gaps = 8/441 (1%)

Query: 132 VLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKM 191
            LS L     N+    + L     +     +P++   T L+  L  +       +++ +M
Sbjct: 128 TLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRM 187

Query: 192 VQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEM-----EFK-DVRADLFTYNTLIALY 245
            +LG   N   Y  LI   C++ +V+   KL  EM     ++  + +  + TY+ +I   
Sbjct: 188 QKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGL 247

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNH 303
           CK G   EA  + + M+ +G+ PD+++Y++LIHGFC  G+  +++ LF ++  +G  P+ 
Sbjct: 248 CKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDM 307

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
           VT++ LID  C+   + EA +L EVM  +G+ P ++TYNS++   C  G +  A  L   
Sbjct: 308 VTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLS 367

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
           M  K + PD ++  TLIN YCK      AM + N ML+ G   +  TY  L+ G  +  +
Sbjct: 368 MPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGK 427

Query: 424 MDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRA 483
           +  AK+L   M   G S +   Y   +DG C  +     ++L +E  S    +++  Y  
Sbjct: 428 VGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSC 487

Query: 484 LIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRR 543
           LI   CK  K++ A  LF  +   G+  D V Y  + + + + G+    + + + M    
Sbjct: 488 LIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENG 547

Query: 544 LMITLKIYRSFSASYAKDNEI 564
               +  Y +    + + N++
Sbjct: 548 CTPDIIAYNTLLCGFCEGNKL 568



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 108/372 (29%), Positives = 192/372 (51%), Gaps = 8/372 (2%)

Query: 153 FDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCK 212
           FD M   + +P + +   LL  LAK      ++ +Y +M   G+  ++   ++L +  C 
Sbjct: 79  FDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILANCLCN 138

Query: 213 SSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVT 272
            + V +    +  +  +    ++ TY TLI   C +    EA  +  RM++ G +P+ VT
Sbjct: 139 VNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVT 198

Query: 273 YNSLIHGFCREGRMREARRLFRDI--------KGATPNHVTYTTLIDGYCRANDLEEALR 324
           Y +LI G C+ G +  A +L +++            P  +TY+ +IDG C+    +EA  
Sbjct: 199 YGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKE 258

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           L E M A+G+ P V++Y++++   C  G+   +  L +EM ++ + PD VT + LI+  C
Sbjct: 259 LFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLC 318

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           K G    A K+   M++ G++ +  TY +LI GFC   +++ A+EL   M   G  P   
Sbjct: 319 KEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEI 378

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
           SY+ L++GYC     +  + L +E +  G   +V+ Y  L++   +K KV  A++LF +M
Sbjct: 379 SYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVM 438

Query: 505 QGNGILGDSVIY 516
           +  G+  +S IY
Sbjct: 439 KTYGVSANSQIY 450



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 118/390 (30%), Positives = 198/390 (50%), Gaps = 42/390 (10%)

Query: 143 LKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHL 202
           LK+ ++ L    Q  V N  P +   +++++ L K    D   +++++M   G++ ++  
Sbjct: 216 LKLHKEMLNDASQYGV-NCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVIS 274

Query: 203 YNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRME 262
           Y+ LIH  C +   D+ + L  EM  + V+ D+ T++ LI   CK+G   EA  + + M 
Sbjct: 275 YSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMI 334

Query: 263 REGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLE 320
           + GI P+++TYNSLI GFC  G +  AR LF  +  KG  P+ ++YTTLI+GYC+   ++
Sbjct: 335 QRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVK 394

Query: 321 EALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM---------------- 364
           EA+ L   M   G  P V TY ++L+ L ++G++ DA +L   M                
Sbjct: 395 EAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFL 454

Query: 365 ----------------NEKK-----IAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAG 403
                           NE K     +  +N +C  LI+  CK G   +A ++  ++ + G
Sbjct: 455 DGLCKNDCLFEAMELFNELKSYNFKLNIENYSC--LIDGLCKAGKLETAWELFEKLSQEG 512

Query: 404 LMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALL 463
           L  D  TY  +IHGFCK  ++D A  L   M + G +P   +Y+ L+ G+C  N  E ++
Sbjct: 513 LQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVI 572

Query: 464 KLLDEFVSRGLCVDVSVYRALIRRFCKKEK 493
           KLL + V + +  + +    ++   CK EK
Sbjct: 573 KLLHKMVQKDVSPNAASCTIVVDMLCKDEK 602



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 114/403 (28%), Positives = 199/403 (49%), Gaps = 8/403 (1%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMV----QLGV--VANIH 201
           +  ++F +M+     P+      L+  L +    ++  K++K+M+    Q GV     + 
Sbjct: 179 EATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVI 238

Query: 202 LYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRM 261
            Y+++I   CK    D+ ++L  EM+ + +  D+ +Y+TLI  +C  G   ++  + D M
Sbjct: 239 TYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEM 298

Query: 262 EREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDL 319
             +G+ PD+VT++ LI   C+EG++ EA++L   +  +G  PN +TY +LIDG+C   DL
Sbjct: 299 VDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDL 358

Query: 320 EEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTL 379
             A  L   M +KG+ P  ++Y +++   CK  ++++A  L NEM +   +P+  T  TL
Sbjct: 359 NSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTL 418

Query: 380 INAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGF 439
           +    + G    A K+   M   G+  +   Y   + G CK   +  A EL   +    F
Sbjct: 419 LKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNF 478

Query: 440 SPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQR 499
             +  +YS L+DG C     E   +L ++    GL  DV  Y  +I  FCK  +VD A  
Sbjct: 479 KLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANI 538

Query: 500 LFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRR 542
           LF  M+ NG   D + Y +L   +    + +    +L  M ++
Sbjct: 539 LFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQK 581



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 94/321 (29%), Positives = 168/321 (52%), Gaps = 2/321 (0%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
            +FD+M    + P +   +VL+++L K+       K+ + M+Q G+V N+  YN LI   
Sbjct: 293 HLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGF 352

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           C   D++   +L   M  K +  D  +Y TLI  YCK     EA+ + + M + G SP++
Sbjct: 353 CMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNV 412

Query: 271 VTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREV 328
            TY +L+ G  ++G++ +A++LF  +K  G + N   Y   +DG C+ + L EA+ L   
Sbjct: 413 TTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNE 472

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           + +      +  Y+ ++  LCK G++  A  L  +++++ + PD VT N +I+ +CK+G 
Sbjct: 473 LKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQ 532

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
             +A  +  +M E G   D   Y  L+ GFC+  +++   +LL  M+    SP+  S + 
Sbjct: 533 VDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTI 592

Query: 449 LVDGYCNKNNEEALLKLLDEF 469
           +VD  C     +  + LL +F
Sbjct: 593 VVDMLCKDEKYKKFVDLLPKF 613



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 63/279 (22%), Positives = 117/279 (41%), Gaps = 10/279 (3%)

Query: 314 CRANDLE--EALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAP 371
           C+  ++   +A    ++M      P + ++N +L  L K         L NEM    ++P
Sbjct: 65  CKTGNITAIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSP 124

Query: 372 DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
           D  T + L N  C +   + A+     +L  G + +  TY  LI G C    +  A  L 
Sbjct: 125 DLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLF 184

Query: 432 FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS------VYRALI 485
             M   G +P+  +Y  L+ G C   N    LKL  E ++      V+       Y  +I
Sbjct: 185 LRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIII 244

Query: 486 RRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
              CK  + D A+ LF  M+  G++ D + Y++L + +  AG+      + D+M  + + 
Sbjct: 245 DGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQ 304

Query: 546 ITLKIYRSFSASYAKDNEILDL--FWSHVVDRGLMSKHI 582
             +  +     +  K+ ++ +       ++ RG++   I
Sbjct: 305 PDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLI 343



 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 31/141 (21%), Positives = 76/141 (53%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           + +++F++++ +N   ++   + L++ L K    +  W++++K+ Q G+  ++  YN++I
Sbjct: 465 EAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMI 524

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           H  CK   VD    L  +ME      D+  YNTL+  +C+     E + +  +M ++ +S
Sbjct: 525 HGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVS 584

Query: 268 PDIVTYNSLIHGFCREGRMRE 288
           P+  +   ++   C++ + ++
Sbjct: 585 PNAASCTIVVDMLCKDEKYKK 605


>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
          Length = 650

 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 121/417 (29%), Positives = 193/417 (46%), Gaps = 2/417 (0%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           + ++M    + P     T L+    ++   +   +V  +M+++G  A     NVLI+  C
Sbjct: 111 MLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYC 170

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           K   V+     + +        D  TYNT +   C+      AL V D M +EG  PD+ 
Sbjct: 171 KLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVF 230

Query: 272 TYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           TYN +++  C+ G++ EA+ +   +  +G  P+  T+ TLI   C  N LEEAL L   +
Sbjct: 231 TYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQV 290

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
             KGV P V T+N ++  LCK G    A RL  EM      PD VT NTLI+  C +G  
Sbjct: 291 TVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKL 350

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
             A+ +   M   G      TY  +I G CK   ++ A+E+   M   G S +  +++ L
Sbjct: 351 GKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTL 410

Query: 450 VDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGI 509
           +DG C     +   +L+++ +S GL  +   Y +++  +CK+  +  A  +   M  NG 
Sbjct: 411 IDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGF 470

Query: 510 LGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
             D V Y +L     +AG  +    +L  M  + +  T K Y     S  + N I D
Sbjct: 471 EVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRD 527



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 136/511 (26%), Positives = 239/511 (46%), Gaps = 21/511 (4%)

Query: 66  WAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIA--------------LRDFLS 111
           ++E      K  + +  T++  L +    ++A  MLE+++              ++ F+ 
Sbjct: 77  YSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVE 136

Query: 112 TPSVLNAL-VKIHDDPDGNSHV---LSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHA 167
             S+  AL VK      G S     ++ L+  Y  L   +D L    Q       P    
Sbjct: 137 EGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQIT 196

Query: 168 CTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEME 227
               +N L ++       KV   MVQ G   ++  YN++++  CK+  +++ + +L +M 
Sbjct: 197 YNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMV 256

Query: 228 FKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMR 287
            +    D+ T+NTLIA  C      EAL +  ++  +G+SPD+ T+N LI+  C+ G   
Sbjct: 257 DRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPH 316

Query: 288 EARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSIL 345
            A RLF ++K  G TP+ VTY TLID  C    L +AL L + M + G     +TYN+I+
Sbjct: 317 LALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTII 376

Query: 346 RKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLM 405
             LCK+ RI +A  + ++M+ + I+ + +T NTLI+  CK      A ++ N+M+  GL 
Sbjct: 377 DGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQ 436

Query: 406 LDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKL 465
            +  TY +++  +CK  ++  A ++L  M   GF     +Y  L++G C     +  LK+
Sbjct: 437 PNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKV 496

Query: 466 LDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWR 525
           L     +G+      Y  +++   ++  +  A  LF  M   G   D++ Y  +     R
Sbjct: 497 LRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCR 556

Query: 526 AGEP-KACSDILDDMYRRRLMITLKIYRSFS 555
            G P K   D + +M  +  +     +R  +
Sbjct: 557 GGGPIKEAFDFMLEMVDKGFIPEFSSFRMLA 587



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 130/453 (28%), Positives = 216/453 (47%), Gaps = 46/453 (10%)

Query: 148 DGLQVFDQ---MRVHNLMP--HLHACTV----LLNSLAKDRLTDMVWKVYKKMVQLGVVA 198
           +G Q+FD    + ++ L P   + A TV    LLN L +     ++  VY +M   G+  
Sbjct: 28  EGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKP 87

Query: 199 NIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQ 258
           ++  +N L+ A C++  V     +L EM  + V  D  T+ TL+  + ++G    AL V+
Sbjct: 88  DVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVK 147

Query: 259 DRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRA 316
            RM   G S   VT N LI+G+C+ GR+ +A    +     G  P+ +TY T ++G C+ 
Sbjct: 148 ARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQN 207

Query: 317 NDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE---------- 366
           + +  AL++ +VM  +G  P V TYN ++  LCK G++ +A  +LN+M +          
Sbjct: 208 DHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTF 267

Query: 367 -------------------------KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLE 401
                                    K ++PD  T N LINA CK+GD   A+++   M  
Sbjct: 268 NTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKN 327

Query: 402 AGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEA 461
           +G   D+ TY  LI   C   ++  A +LL  M   G   S  +Y+ ++DG C K   E 
Sbjct: 328 SGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEE 387

Query: 462 LLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAY 521
             ++ D+   +G+  +   +  LI   CK +K+D A  L N M   G+  +++ Y S+  
Sbjct: 388 AEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILT 447

Query: 522 AYWRAGEPKACSDILDDMYRRRLMITLKIYRSF 554
            Y + G+ K  +DIL+ M      + +  Y + 
Sbjct: 448 HYCKQGDIKKAADILETMTANGFEVDVVTYGTL 480



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 120/412 (29%), Positives = 194/412 (47%), Gaps = 25/412 (6%)

Query: 170 VLLNSLAK-DRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEF 228
           VL+N   K  R+ D +  + +++   G   +   YN  ++  C++  V    K++  M  
Sbjct: 164 VLINGYCKLGRVEDALGYIQQEIAD-GFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQ 222

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
           +    D+FTYN ++   CK G   EA  + ++M   G  PDI T+N+LI   C   R+ E
Sbjct: 223 EGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEE 282

Query: 289 ARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILR 346
           A  L R +  KG +P+  T+  LI+  C+  D   ALRL E M   G  P  VTYN+++ 
Sbjct: 283 ALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLID 342

Query: 347 KLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLML 406
            LC  G++  A  LL +M         +T NT+I+  CK      A +V ++M   G+  
Sbjct: 343 NLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISR 402

Query: 407 DQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLL 466
           +  T+  LI G CK K++D A EL+  M+  G  P+  +Y+ ++  YC + + +    +L
Sbjct: 403 NAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADIL 462

Query: 467 DEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRA 526
           +   + G  VDV  Y  LI   CK  +   A ++   M+  G+                 
Sbjct: 463 ETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGM----------------R 506

Query: 527 GEPKACSDILDDMYRR-RLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGL 577
             PKA + +L  ++RR  +   L ++R      A+  E  D     +V RGL
Sbjct: 507 PTPKAYNPVLQSLFRRNNIRDALSLFREM----AEVGEPPDALTYKIVFRGL 554



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 122/462 (26%), Positives = 203/462 (43%), Gaps = 61/462 (13%)

Query: 46  VLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIA 105
           VL+N Y  C +  +  A     +     ++    ++ T ++ L +N H   A        
Sbjct: 164 VLINGY--CKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHAL------- 214

Query: 106 LRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQ--DGLQVFDQMRVHNLMP 163
                    V++ +V+   DPD    V ++ ++     K  Q  +   + +QM     +P
Sbjct: 215 --------KVMDVMVQEGHDPD----VFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLP 262

Query: 164 HLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLL 223
            +     L+ +L      +    + +++   GV  +++ +N+LI+A CK  D     +L 
Sbjct: 263 DITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLF 322

Query: 224 CEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCRE 283
            EM+      D  TYNTLI   C  G   +AL +   ME  G     +TYN++I G C++
Sbjct: 323 EEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKK 382

Query: 284 GRMREARRLFR--DIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTY 341
            R+ EA  +F   D++G + N +T+ TLIDG C+   +++A  L   M ++G+ P  +TY
Sbjct: 383 MRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITY 442

Query: 342 NSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKV------ 395
           NSIL   CK+G I+ A  +L  M       D VT  TLIN  CK G T  A+KV      
Sbjct: 443 NSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRI 502

Query: 396 -------------------KN----------RMLEAGLMLDQFTYKALIHGFCKAK-EMD 425
                              +N           M E G   D  TYK +  G C+    + 
Sbjct: 503 KGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIK 562

Query: 426 IAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLD 467
            A + +  M+D GF P + S+  L +G  N   ++  ++ ++
Sbjct: 563 EAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGMDDYFIRAIE 604



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 132/274 (48%), Gaps = 18/274 (6%)

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD-----------IKGATPNHVTYTT 308
            M REG    +   +S +  +       E ++LF D           + G   + V Y  
Sbjct: 7   EMRREGHQVKLGVVHSFLDSY-------EGQQLFDDAVDLILNQLQPLFGIQADTVVYNH 59

Query: 309 LIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKK 368
           L++     + ++    +   M A+G+ P VVT+N++++ LC+  ++R A  +L EM+ + 
Sbjct: 60  LLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRG 119

Query: 369 IAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAK 428
           +APD  T  TL+  + + G   +A++VK RMLE G    + T   LI+G+CK   ++ A 
Sbjct: 120 VAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDAL 179

Query: 429 ELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRF 488
             +   +  GF P   +Y+  V+G C  ++    LK++D  V  G   DV  Y  ++   
Sbjct: 180 GYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCL 239

Query: 489 CKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYA 522
           CK  +++ A+ + N M   G L D   + +L  A
Sbjct: 240 CKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAA 273



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 60/248 (24%), Positives = 112/248 (45%), Gaps = 3/248 (1%)

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
           L L ++    G+    V YN +L  L +  +++    + +EM  + I PD VT NTL+ A
Sbjct: 39  LILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKA 98

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
            C+     +A+ +   M   G+  D+ T+  L+ GF +   ++ A  +   ML+ G S +
Sbjct: 99  LCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSAT 158

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             + + L++GYC     E  L  + + ++ G   D   Y   +   C+ + V +A ++ +
Sbjct: 159 KVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMD 218

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDN 562
           +M   G   D   Y  +     + G+ +    IL+ M  R  +  +  + +  A+    N
Sbjct: 219 VMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGN 278

Query: 563 ---EILDL 567
              E LDL
Sbjct: 279 RLEEALDL 286


>gi|357121540|ref|XP_003562477.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Brachypodium distachyon]
          Length = 556

 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 121/390 (31%), Positives = 198/390 (50%), Gaps = 6/390 (1%)

Query: 134 SWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHAC--TVLLNSLAKDRLTDMVWKVYKKM 191
           S +V  +       D   + D++  H +   L+AC    LL+S  + R  D V  + K+M
Sbjct: 152 SVVVDGFCKSGSVDDAHGLLDELPRHGV--GLNACCYNSLLDSYTRQRNDDAVAGLLKEM 209

Query: 192 VQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMH 251
              GV   +  Y +L+    ++ D+ KVE +  EM+ K+V  D++ Y+ +I  YC+ G  
Sbjct: 210 ENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGGNV 269

Query: 252 YEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTL 309
             A  V D     G+ P+  TY +LI+GFC+ G++  A  L  D  ++G   N + + T+
Sbjct: 270 RRASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTM 329

Query: 310 IDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI 369
           IDGYCR   +E+AL ++ VM   G+   + TYN++   LC+  R+ DA +LL+ M EK +
Sbjct: 330 IDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGV 389

Query: 370 APDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKE 429
           AP+ V+  TLI+ + K GD   A ++   M   G      TY  +I G+ K   +  A+ 
Sbjct: 390 APNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAER 449

Query: 430 LLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFC 489
               M   G  P   +Y+ LV G+C     +  L+L +E   RG   +V  Y AL+    
Sbjct: 450 FKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGLA 509

Query: 490 KKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
           K+ + + A +L++ M   G+  D  +Y+ L
Sbjct: 510 KEGRSEEAFQLYDDMLAAGLTPDDTLYSVL 539



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 104/301 (34%), Positives = 158/301 (52%), Gaps = 2/301 (0%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           V+D+M+  N+   ++  + ++N+  +        +V+ + V  GV  N   Y  LI+  C
Sbjct: 240 VYDEMKRKNVAGDVYFYSAVINAYCRGGNVRRASEVFDECVGHGVEPNERTYGALINGFC 299

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           K   ++  E LL +M+ + V  +   +NT+I  YC+ GM  +AL ++  ME+ GI  DI 
Sbjct: 300 KIGQIEAAEMLLADMQLRGVGHNQIVFNTMIDGYCRHGMVEKALEIKAVMEKMGIELDIY 359

Query: 272 TYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           TYN+L  G CR  RM +A++L   +  KG  PN+V+YTTLI  + +  D+ EA RL   M
Sbjct: 360 TYNTLACGLCRVNRMEDAKKLLHIMAEKGVAPNYVSYTTLISIHAKEGDMVEARRLFRDM 419

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
             KG  P VVTYN ++    K G IR+A R   EM +K + PD  T   L++ +C  G  
Sbjct: 420 EGKGSRPSVVTYNVMIDGYIKNGSIREAERFKKEMEKKGLVPDIYTYAGLVHGHCVNGKV 479

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
             A+++   M   G   +   Y AL+ G  K    + A +L   ML AG +P    YS L
Sbjct: 480 DVALRLFEEMKHRGTKPNVVAYTALVSGLAKEGRSEEAFQLYDDMLAAGLTPDDTLYSVL 539

Query: 450 V 450
           V
Sbjct: 540 V 540



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 110/398 (27%), Positives = 181/398 (45%), Gaps = 2/398 (0%)

Query: 167 ACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEM 226
           + +V+++   K    D    +  ++ + GV  N   YN L+ +  +  + D V  LL EM
Sbjct: 150 SASVVVDGFCKSGSVDDAHGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDAVAGLLKEM 209

Query: 227 EFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRM 286
           E + V   + TY  L+    + G   +  AV D M+R+ ++ D+  Y+++I+ +CR G +
Sbjct: 210 ENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGGNV 269

Query: 287 REARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSI 344
           R A  +F +    G  PN  TY  LI+G+C+   +E A  L   M  +GV    + +N++
Sbjct: 270 RRASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTM 329

Query: 345 LRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGL 404
           +   C+ G +  A  +   M +  I  D  T NTL    C++     A K+ + M E G+
Sbjct: 330 IDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGV 389

Query: 405 MLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLK 464
             +  +Y  LI    K  +M  A+ L   M   G  PS  +Y+ ++DGY    +     +
Sbjct: 390 APNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAER 449

Query: 465 LLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYW 524
              E   +GL  D+  Y  L+   C   KVD A RLF  M+  G   + V YT+L     
Sbjct: 450 FKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGLA 509

Query: 525 RAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDN 562
           + G  +    + DDM    L     +Y     S   D+
Sbjct: 510 KEGRSEEAFQLYDDMLAAGLTPDDTLYSVLVGSLHTDS 547



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 106/227 (46%), Gaps = 2/227 (0%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N  V + ++  Y    M +  L++   M    +   ++    L   L +    +   K+ 
Sbjct: 322 NQIVFNTMIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLL 381

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
             M + GV  N   Y  LI    K  D+ +  +L  +ME K  R  + TYN +I  Y K 
Sbjct: 382 HIMAEKGVAPNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKN 441

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTY 306
           G   EA   +  ME++G+ PDI TY  L+HG C  G++  A RLF ++K  G  PN V Y
Sbjct: 442 GSIREAERFKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAY 501

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGR 353
           T L+ G  +    EEA +L + M A G+ P    Y+ ++  L  + R
Sbjct: 502 TALVSGLAKEGRSEEAFQLYDDMLAAGLTPDDTLYSVLVGSLHTDSR 548



 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 78/335 (23%), Positives = 146/335 (43%), Gaps = 40/335 (11%)

Query: 284 GRMREARRLFRDIKGATPNHVT---YTTLIDGYCRANDLEEA------------------ 322
           G++  A  L      + P  VT    + ++DG+C++  +++A                  
Sbjct: 126 GQLPAAADLLGKAIASCPASVTPLSASVVVDGFCKSGSVDDAHGLLDELPRHGVGLNACC 185

Query: 323 -----------------LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMN 365
                              L + M  +GV P V TY  ++  L + G I     + +EM 
Sbjct: 186 YNSLLDSYTRQRNDDAVAGLLKEMENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMK 245

Query: 366 EKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMD 425
            K +A D    + +INAYC+ G+   A +V +  +  G+  ++ TY ALI+GFCK  +++
Sbjct: 246 RKNVAGDVYFYSAVINAYCRGGNVRRASEVFDECVGHGVEPNERTYGALINGFCKIGQIE 305

Query: 426 IAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
            A+ LL  M   G   +   ++ ++DGYC     E  L++       G+ +D+  Y  L 
Sbjct: 306 AAEMLLADMQLRGVGHNQIVFNTMIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLA 365

Query: 486 RRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
              C+  +++ A++L ++M   G+  + V YT+L   + + G+      +  DM  +   
Sbjct: 366 CGLCRVNRMEDAKKLLHIMAEKGVAPNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSR 425

Query: 546 ITLKIYRSFSASYAKDNEI--LDLFWSHVVDRGLM 578
            ++  Y      Y K+  I   + F   +  +GL+
Sbjct: 426 PSVVTYNVMIDGYIKNGSIREAERFKKEMEKKGLV 460


>gi|242065566|ref|XP_002454072.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
 gi|241933903|gb|EES07048.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
          Length = 820

 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 118/370 (31%), Positives = 185/370 (50%), Gaps = 3/370 (0%)

Query: 171 LLNSLAKDRLTDMVWKVYKKMVQLGVVANIH-LYNVLIHACCKSSDVDKVEKLLCEMEFK 229
           LL   ++  LT ++ +++  M   G  A     YN LI A C+ +D+   ++ L  M   
Sbjct: 99  LLTHFSRYALTPLMLRLFAHMYHHGPPAPTGATYNALIRALCRRADLRHAQRYLSLMVRS 158

Query: 230 DVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA 289
             R D FT+N+LI  YC+      A  + D+M   G S D V+Y +LI GFC  GR+ EA
Sbjct: 159 GWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGFCETGRVDEA 218

Query: 290 RRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLC 349
             LFR+++   P+  T+  L+ G C A   EE L + + M   G  P    Y +++   C
Sbjct: 219 LELFRELE--QPDMYTHAALVKGLCDARRGEEGLYMLQKMKELGWRPATRAYAALVDLWC 276

Query: 350 KEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQF 409
           +E +  +A ++LNEM +  + P  VTC  ++NAYC+ G  + A++V   M   G   + +
Sbjct: 277 REQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVW 336

Query: 410 TYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEF 469
           TY A++ GFC   ++  A  LL  M + G  P   +Y+ L+ G C   + E+  +LL   
Sbjct: 337 TYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLM 396

Query: 470 VSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEP 529
              GL  D   Y  LI   CK  KVD A  LF+ ++  GI  +SV + ++     + G+ 
Sbjct: 397 EGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKF 456

Query: 530 KACSDILDDM 539
                 L+ M
Sbjct: 457 DVACTFLEKM 466



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 116/452 (25%), Positives = 202/452 (44%), Gaps = 23/452 (5%)

Query: 90  KNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDG 149
           + +    AQ++ +K+ LR F        AL++                  +       + 
Sbjct: 176 RTQQLDVAQDLFDKMPLRGFSQDAVSYAALIE-----------------GFCETGRVDEA 218

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           L++F ++      P ++    L+  L   R  +    + +KM +LG       Y  L+  
Sbjct: 219 LELFRELE----QPDMYTHAALVKGLCDARRGEEGLYMLQKMKELGWRPATRAYAALVDL 274

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
            C+    ++ EK+L EM    +     T   ++  YC++G    A+ V + M+ +G  P+
Sbjct: 275 WCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCEPN 334

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLRE 327
           + TYN+++ GFC  G++ +A  L   ++  G  P+ VTY  LI G C    +E A RL  
Sbjct: 335 VWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLR 394

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
           +M   G+     TYN ++  LCK G++ +A  L + +  + I P++VT NT+IN  CK G
Sbjct: 395 LMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGG 454

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
               A     +M+ AG   D +TY   I   CK K        +  ML     PS  +Y+
Sbjct: 455 KFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYT 514

Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGN 507
            ++D    + N     ++  + VS G   DV  Y   +R +C + ++  A+ +   M+  
Sbjct: 515 IVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKG 574

Query: 508 GILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
           GI+ D++ Y +L   +   G+      IL  M
Sbjct: 575 GIIVDAMAYNTLIDGHTSIGKTDHAVTILKHM 606



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 112/441 (25%), Positives = 202/441 (45%), Gaps = 8/441 (1%)

Query: 116 LNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSL 175
           L+ +V+    PD  +   + L++ Y   +       +FD+M +        +   L+   
Sbjct: 152 LSLMVRSGWRPD--AFTFNSLILGYCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGF 209

Query: 176 AKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADL 235
            +    D   ++++++ Q     +++ +  L+   C +   ++   +L +M+    R   
Sbjct: 210 CETGRVDEALELFRELEQ----PDMYTHAALVKGLCDARRGEEGLYMLQKMKELGWRPAT 265

Query: 236 FTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD 295
             Y  L+ L+C++    EA  + + M   G+ P  VT  ++++ +CREGRM  A R+F  
Sbjct: 266 RAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFES 325

Query: 296 --IKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGR 353
             +KG  PN  TY  ++ G+C    + +A+ L + M   GV P VVTYN ++R  C +G 
Sbjct: 326 MKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGH 385

Query: 354 IRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKA 413
           I  A RLL  M    +A D  T N LI+A CK G    A  + + +   G+  +  T+  
Sbjct: 386 IESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNT 445

Query: 414 LIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
           +I+G CK  + D+A   L  M+ AG +P   +YS  ++  C        L  +DE + + 
Sbjct: 446 VINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKD 505

Query: 474 LCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACS 533
           +      Y  +I R  K+     A R++  M   G   D V YT+   AY   G      
Sbjct: 506 VKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAE 565

Query: 534 DILDDMYRRRLMITLKIYRSF 554
           +++ +M +  +++    Y + 
Sbjct: 566 NVVMEMKKGGIIVDAMAYNTL 586



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 107/454 (23%), Positives = 187/454 (41%), Gaps = 53/454 (11%)

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           +V  + N+      + + DQMR   + P +    +L+     D   +  +++ + M   G
Sbjct: 341 MVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNG 400

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
           + A+ + YNVLI A CK+  VD+   L   +E++ +R +  T+NT+I   CK G    A 
Sbjct: 401 LAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVAC 460

Query: 256 AVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGY 313
              ++M   G +PD  TY+  I   C+    RE      ++  K   P+ V YT +ID  
Sbjct: 461 TFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRL 520

Query: 314 CRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDN 373
            +  +   A R+   M + G  P VVTY + +R  C EGR+ +A  ++ EM +  I  D 
Sbjct: 521 FKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDA 580

Query: 374 VTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT----------------------- 410
           +  NTLI+ +  IG T  A+ +   M     M + FT                       
Sbjct: 581 MAYNTLIDGHTSIGKTDHAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEDVPLKTTS 640

Query: 411 ----------------------------YKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
                                       Y A++ GF + + +D    L+  M +     +
Sbjct: 641 VWKTIELADVFELFELMKKNSVPSSARAYLAILEGFSEERRLDEVTSLVSHMKEDDLPLN 700

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
              Y+ LV+ +C          LL   +  G   ++  Y+ L+  F  + + D A+ +F 
Sbjct: 701 EDIYTSLVNCFCKLRMYPDAWALLCSMIGHGFLPNLISYQYLLSGFTAEGQADRAKEIFR 760

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDIL 536
            ++      D +++  +     R G P  C D++
Sbjct: 761 GLRWKEYNTDEIVWKIIIDGLIRQGHPDMCHDMI 794



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 109/395 (27%), Positives = 175/395 (44%), Gaps = 30/395 (7%)

Query: 149 GLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQL------GVVANIHL 202
            ++VF+ M++    P++     ++           V KVYK M  L      GV  ++  
Sbjct: 319 AVRVFESMKLKGCEPNVWTYNAMVQGFCN------VGKVYKAMALLDQMRECGVEPDVVT 372

Query: 203 YNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRME 262
           YN+LI   C    ++   +LL  ME   + AD +TYN LI   CK G   EA ++ D +E
Sbjct: 373 YNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLE 432

Query: 263 REGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLE 320
             GI P+ VT+N++I+G C+ G+   A      +   G  P+  TY+  I+  C+     
Sbjct: 433 YRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSR 492

Query: 321 EALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLI 380
           E L   + M  K V P  V Y  ++ +L KE     A R+  +M     +PD VT  T +
Sbjct: 493 EGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSV 552

Query: 381 NAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFS 440
            AYC  G    A  V   M + G+++D   Y  LI G     + D A  +L  M      
Sbjct: 553 RAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKHMTGVASM 612

Query: 441 PSYCSYSWLVDGYCNKNNEEAL----------LKLLDEFVSRGLCVDVSV------YRAL 484
           P++ ++  L+     +   E +          ++L D F    L    SV      Y A+
Sbjct: 613 PNHFTFFILLRHLLQRRLAEDVPLKTTSVWKTIELADVFELFELMKKNSVPSSARAYLAI 672

Query: 485 IRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
           +  F ++ ++D    L + M+ + +  +  IYTSL
Sbjct: 673 LEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSL 707


>gi|334183626|ref|NP_176639.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122242336|sp|Q0WKZ3.1|PP105_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64580
 gi|110741328|dbj|BAF02214.1| hypothetical protein [Arabidopsis thaliana]
 gi|332196134|gb|AEE34255.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 523

 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 129/441 (29%), Positives = 209/441 (47%), Gaps = 37/441 (8%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D   +F +M     +P +   T +L  +AK    D+V  +Y KM  LG+  +++ + +LI
Sbjct: 62  DAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILI 121

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRM------ 261
           H  C+ S +     LL +M     R  + T  +L+  +C+     EA+++ D M      
Sbjct: 122 HCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFV 181

Query: 262 -----------------------------EREGISPDIVTYNSLIHGFCREGRMREARRL 292
                                        E++GI  D VTYN+LI G    GR  +A RL
Sbjct: 182 PNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARL 241

Query: 293 FRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
            RD+  +   PN + +T LID + +  +L EA  L + M  + V P V TYNS++   C 
Sbjct: 242 LRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCI 301

Query: 351 EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
            G + DA  + + M  K   PD VT NTLI  +CK       MK+   M   GL+ D FT
Sbjct: 302 HGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFT 361

Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFV 470
           Y  LIHG+C+A ++++A+++   M+D G SP   +Y+ L+D  CN    E  L ++++  
Sbjct: 362 YNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQ 421

Query: 471 SRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPK 530
              + VD+  Y  +I+  C+ +K+  A  LF  +   G+  D++ Y ++     R G  +
Sbjct: 422 KSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQR 481

Query: 531 ACSDILDDMYRRRLMITLKIY 551
               +   M     M + +IY
Sbjct: 482 EADKLCRRMKEDGFMPSERIY 502



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 113/372 (30%), Positives = 188/372 (50%), Gaps = 2/372 (0%)

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
           D  + ++ +M+Q   + +I  +  ++    K +  D V  L  +ME   +  DL+++  L
Sbjct: 61  DDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTIL 120

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GA 299
           I  +C+      ALA+  +M + G  P IVT  SL++GFC+  R +EA  L   +   G 
Sbjct: 121 IHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGF 180

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
            PN V Y T+I+G C+  DL  AL +   M  KG+    VTYN+++  L   GR  DA R
Sbjct: 181 VPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAAR 240

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
           LL +M ++KI P+ +    LI+ + K G+   A  +   M+   ++ + FTY +LI+GFC
Sbjct: 241 LLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFC 300

Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
               +  AK +   M+  G  P   +Y+ L+ G+C     E  +KL  E   +GL  D  
Sbjct: 301 IHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAF 360

Query: 480 VYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
            Y  LI  +C+  K++ AQ++FN M   G+  D V Y  L       G+ +    +++D+
Sbjct: 361 TYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDL 420

Query: 540 YRRRLMITLKIY 551
            +  + + +  Y
Sbjct: 421 QKSEMDVDIITY 432



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 92/342 (26%), Positives = 167/342 (48%), Gaps = 2/342 (0%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           Q+ + + D M     +P++     ++N L K+R  +   +V+  M + G+ A+   YN L
Sbjct: 166 QEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTL 225

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           I     S       +LL +M  + +  ++  +  LI  + K+G   EA  +   M R  +
Sbjct: 226 ISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSV 285

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
            P++ TYNSLI+GFC  G + +A+ +F  +  KG  P+ VTY TLI G+C++  +E+ ++
Sbjct: 286 VPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMK 345

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           L   M  +G+     TYN+++   C+ G++  A ++ N M +  ++PD VT N L++  C
Sbjct: 346 LFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLC 405

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
             G    A+ +   + ++ + +D  TY  +I G C+  ++  A  L   +   G  P   
Sbjct: 406 NNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAI 465

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
           +Y  ++ G C K  +    KL       G      +Y   +R
Sbjct: 466 AYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLR 507



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 56/238 (23%), Positives = 110/238 (46%), Gaps = 12/238 (5%)

Query: 353 RIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYK 412
           +  DA  L  EM + +  P  V    ++    K+      + + ++M   G+  D +++ 
Sbjct: 59  KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118

Query: 413 ALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSR 472
            LIH FC+   + +A  LL  M+  GF PS  +   L++G+C  N  +  + L+D     
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178

Query: 473 GLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKAC 532
           G   +V +Y  +I   CK   ++ A  +F  M+  GI  D+V Y +L      +G     
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 238

Query: 533 SDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKEMQLRN 590
           + +L DM +R++   +  + +   ++ K+  +L+            +++++KEM  R+
Sbjct: 239 ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLE------------ARNLYKEMIRRS 284



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/266 (21%), Positives = 113/266 (42%)

Query: 301 PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRL 360
           P+ V +T ++    + N  +  + L   M   G+   + ++  ++   C+  R+  A  L
Sbjct: 77  PSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALAL 136

Query: 361 LNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCK 420
           L +M +    P  VT  +L+N +C+      A+ + + M   G + +   Y  +I+G CK
Sbjct: 137 LGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCK 196

Query: 421 AKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSV 480
            ++++ A E+ + M   G      +Y+ L+ G  N        +LL + V R +  +V  
Sbjct: 197 NRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIF 256

Query: 481 YRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMY 540
           + ALI  F K+  +  A+ L+  M    ++ +   Y SL   +   G       + D M 
Sbjct: 257 FTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMV 316

Query: 541 RRRLMITLKIYRSFSASYAKDNEILD 566
            +     +  Y +    + K   + D
Sbjct: 317 SKGCFPDVVTYNTLITGFCKSKRVED 342


>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
 gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
           Group]
 gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
          Length = 742

 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 121/417 (29%), Positives = 193/417 (46%), Gaps = 2/417 (0%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           + ++M    + P     T L+    ++   +   +V  +M+++G  A     NVLI+  C
Sbjct: 203 MLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYC 262

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           K   V+     + +        D  TYNT +   C+      AL V D M +EG  PD+ 
Sbjct: 263 KLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVF 322

Query: 272 TYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           TYN +++  C+ G++ EA+ +   +  +G  P+  T+ TLI   C  N LEEAL L   +
Sbjct: 323 TYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQV 382

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
             KGV P V T+N ++  LCK G    A RL  EM      PD VT NTLI+  C +G  
Sbjct: 383 TVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKL 442

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
             A+ +   M   G      TY  +I G CK   ++ A+E+   M   G S +  +++ L
Sbjct: 443 GKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTL 502

Query: 450 VDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGI 509
           +DG C     +   +L+++ +S GL  +   Y +++  +CK+  +  A  +   M  NG 
Sbjct: 503 IDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGF 562

Query: 510 LGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
             D V Y +L     +AG  +    +L  M  + +  T K Y     S  + N I D
Sbjct: 563 EVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRD 619



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 137/511 (26%), Positives = 238/511 (46%), Gaps = 21/511 (4%)

Query: 66  WAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRD--------------FLS 111
           ++E      K  + +  T++  L +    ++A  MLE+++ R               F+ 
Sbjct: 169 YSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVE 228

Query: 112 TPSVLNAL-VKIHDDPDGNSHV---LSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHA 167
             S+  AL VK      G S     ++ L+  Y  L   +D L    Q       P    
Sbjct: 229 EGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQIT 288

Query: 168 CTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEME 227
               +N L ++       KV   MVQ G   ++  YN++++  CK+  +++ + +L +M 
Sbjct: 289 YNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMV 348

Query: 228 FKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMR 287
            +    D+ T+NTLIA  C      EAL +  ++  +G+SPD+ T+N LI+  C+ G   
Sbjct: 349 DRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPH 408

Query: 288 EARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSIL 345
            A RLF ++K  G TP+ VTY TLID  C    L +AL L + M + G     +TYN+I+
Sbjct: 409 LALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTII 468

Query: 346 RKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLM 405
             LCK+ RI +A  + ++M+ + I+ + +T NTLI+  CK      A ++ N+M+  GL 
Sbjct: 469 DGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQ 528

Query: 406 LDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKL 465
            +  TY +++  +CK  ++  A ++L  M   GF     +Y  L++G C     +  LK+
Sbjct: 529 PNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKV 588

Query: 466 LDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWR 525
           L     +G+      Y  +++   ++  +  A  LF  M   G   D++ Y  +     R
Sbjct: 589 LRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCR 648

Query: 526 AGEP-KACSDILDDMYRRRLMITLKIYRSFS 555
            G P K   D + +M  +  +     +R  +
Sbjct: 649 GGGPIKEAFDFMLEMVDKGFIPEFSSFRMLA 679



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 129/438 (29%), Positives = 212/438 (48%), Gaps = 46/438 (10%)

Query: 148 DGLQVFDQ---MRVHNLMP--HLHACTV----LLNSLAKDRLTDMVWKVYKKMVQLGVVA 198
           +G Q+FD    + ++ L P   + A TV    LLN L +     ++  VY +M   G+  
Sbjct: 120 EGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKP 179

Query: 199 NIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQ 258
           ++  +N L+ A C++  V     +L EM  + V  D  T+ TL+  + ++G    AL V+
Sbjct: 180 DVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVK 239

Query: 259 DRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRA 316
            RM   G S   VT N LI+G+C+ GR+ +A    +     G  P+ +TY T ++G C+ 
Sbjct: 240 ARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQN 299

Query: 317 NDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE---------- 366
           + +  AL++ +VM  +G  P V TYN ++  LCK G++ +A  +LN+M +          
Sbjct: 300 DHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTF 359

Query: 367 -------------------------KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLE 401
                                    K ++PD  T N LINA CK+GD   A+++   M  
Sbjct: 360 NTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKN 419

Query: 402 AGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEA 461
           +G   D+ TY  LI   C   ++  A +LL  M   G   S  +Y+ ++DG C K   E 
Sbjct: 420 SGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEE 479

Query: 462 LLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAY 521
             ++ D+   +G+  +   +  LI   CK +K+D A  L N M   G+  +++ Y S+  
Sbjct: 480 AEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILT 539

Query: 522 AYWRAGEPKACSDILDDM 539
            Y + G+ K  +DIL+ M
Sbjct: 540 HYCKQGDIKKAADILETM 557



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 120/412 (29%), Positives = 194/412 (47%), Gaps = 25/412 (6%)

Query: 170 VLLNSLAK-DRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEF 228
           VL+N   K  R+ D +  + +++   G   +   YN  ++  C++  V    K++  M  
Sbjct: 256 VLINGYCKLGRVEDALGYIQQEIAD-GFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQ 314

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
           +    D+FTYN ++   CK G   EA  + ++M   G  PDI T+N+LI   C   R+ E
Sbjct: 315 EGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEE 374

Query: 289 ARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILR 346
           A  L R +  KG +P+  T+  LI+  C+  D   ALRL E M   G  P  VTYN+++ 
Sbjct: 375 ALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLID 434

Query: 347 KLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLML 406
            LC  G++  A  LL +M         +T NT+I+  CK      A +V ++M   G+  
Sbjct: 435 NLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISR 494

Query: 407 DQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLL 466
           +  T+  LI G CK K++D A EL+  M+  G  P+  +Y+ ++  YC + + +    +L
Sbjct: 495 NAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADIL 554

Query: 467 DEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRA 526
           +   + G  VDV  Y  LI   CK  +   A ++   M+  G+                 
Sbjct: 555 ETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGM----------------R 598

Query: 527 GEPKACSDILDDMYRR-RLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGL 577
             PKA + +L  ++RR  +   L ++R      A+  E  D     +V RGL
Sbjct: 599 PTPKAYNPVLQSLFRRNNIRDALSLFREM----AEVGEPPDALTYKIVFRGL 646



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 122/462 (26%), Positives = 203/462 (43%), Gaps = 61/462 (13%)

Query: 46  VLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIA 105
           VL+N Y  C +  +  A     +     ++    ++ T ++ L +N H   A        
Sbjct: 256 VLINGY--CKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHAL------- 306

Query: 106 LRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQ--DGLQVFDQMRVHNLMP 163
                    V++ +V+   DPD    V ++ ++     K  Q  +   + +QM     +P
Sbjct: 307 --------KVMDVMVQEGHDPD----VFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLP 354

Query: 164 HLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLL 223
            +     L+ +L      +    + +++   GV  +++ +N+LI+A CK  D     +L 
Sbjct: 355 DITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLF 414

Query: 224 CEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCRE 283
            EM+      D  TYNTLI   C  G   +AL +   ME  G     +TYN++I G C++
Sbjct: 415 EEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKK 474

Query: 284 GRMREARRLFR--DIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTY 341
            R+ EA  +F   D++G + N +T+ TLIDG C+   +++A  L   M ++G+ P  +TY
Sbjct: 475 MRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITY 534

Query: 342 NSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKV------ 395
           NSIL   CK+G I+ A  +L  M       D VT  TLIN  CK G T  A+KV      
Sbjct: 535 NSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRI 594

Query: 396 -------------------KN----------RMLEAGLMLDQFTYKALIHGFCKAK-EMD 425
                              +N           M E G   D  TYK +  G C+    + 
Sbjct: 595 KGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIK 654

Query: 426 IAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLD 467
            A + +  M+D GF P + S+  L +G  N   ++  ++ ++
Sbjct: 655 EAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGMDDYFIRAIE 696



 Score =  121 bits (304), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 75/273 (27%), Positives = 132/273 (48%), Gaps = 18/273 (6%)

Query: 261 MEREGISPDIVTYNSLIHGFCREGRMREARRLFRD-----------IKGATPNHVTYTTL 309
           M REG    +   +S +  +       E ++LF D           + G   + V Y  L
Sbjct: 100 MRREGHQVKLGVVHSFLDSY-------EGQQLFDDAVDLILNQLQPLFGIQADTVVYNHL 152

Query: 310 IDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI 369
           ++     + ++    +   M A+G+ P VVT+N++++ LC+  ++R A  +L EM+ + +
Sbjct: 153 LNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGV 212

Query: 370 APDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKE 429
           APD  T  TL+  + + G   +A++VK RMLE G    + T   LI+G+CK   ++ A  
Sbjct: 213 APDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALG 272

Query: 430 LLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFC 489
            +   +  GF P   +Y+  V+G C  ++    LK++D  V  G   DV  Y  ++   C
Sbjct: 273 YIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLC 332

Query: 490 KKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYA 522
           K  +++ A+ + N M   G L D   + +L  A
Sbjct: 333 KNGQLEEAKGILNQMVDRGCLPDITTFNTLIAA 365



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 60/248 (24%), Positives = 112/248 (45%), Gaps = 3/248 (1%)

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
           L L ++    G+    V YN +L  L +  +++    + +EM  + I PD VT NTL+ A
Sbjct: 131 LILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKA 190

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
            C+     +A+ +   M   G+  D+ T+  L+ GF +   ++ A  +   ML+ G S +
Sbjct: 191 LCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSAT 250

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             + + L++GYC     E  L  + + ++ G   D   Y   +   C+ + V +A ++ +
Sbjct: 251 KVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMD 310

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDN 562
           +M   G   D   Y  +     + G+ +    IL+ M  R  +  +  + +  A+    N
Sbjct: 311 VMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGN 370

Query: 563 ---EILDL 567
              E LDL
Sbjct: 371 RLEEALDL 378



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/213 (21%), Positives = 88/213 (41%), Gaps = 3/213 (1%)

Query: 318 DLEEALR-LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTC 376
           D + ALR L   +A     PG   Y  I+RKL   G +     L+ EM  +         
Sbjct: 53  DPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVV 112

Query: 377 NTLINAY--CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGM 434
           ++ +++Y   ++ D A  + +       G+  D   Y  L++   +  +M + + +   M
Sbjct: 113 HSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEM 172

Query: 435 LDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKV 494
              G  P   +++ L+   C  +     + +L+E  SRG+  D + +  L++ F ++  +
Sbjct: 173 GARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSI 232

Query: 495 DYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
           + A R+   M   G     V    L   Y + G
Sbjct: 233 EAALRVKARMLEMGCSATKVTVNVLINGYCKLG 265


>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 545

 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 113/378 (29%), Positives = 196/378 (51%), Gaps = 2/378 (0%)

Query: 170 VLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFK 229
           +L+N + K   T    ++ +++ +  +  N+ +Y+++I   CK + VD+   L  EM  K
Sbjct: 168 ILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGK 227

Query: 230 DVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA 289
            +  D+ TY+ L++ +C  G    A+ + + M  E I+PDI TY  L+   C+EG+++EA
Sbjct: 228 GISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEA 287

Query: 290 RRLFRDIKGATPNH--VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRK 347
             +   +  A  N   V Y+TL+DGYC  N++  A R+   M   GV P V  Y+ ++  
Sbjct: 288 ENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMING 347

Query: 348 LCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLD 407
           LCK  R+ +A  L  E+++K + PD VT  +LI+  CK G  +    + + ML+ G   D
Sbjct: 348 LCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPD 407

Query: 408 QFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLD 467
             TY  LI   CK   +D A  L   M D    P+  +++ L+DG C     +  L+   
Sbjct: 408 VITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQ 467

Query: 468 EFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
           + +++G C++V  Y  +I   CK+  +D A  L + M+ NG + D+V +  +  A++   
Sbjct: 468 DLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCISDAVTFEIMIRAFFDKD 527

Query: 528 EPKACSDILDDMYRRRLM 545
           E      ++ +M  R L+
Sbjct: 528 ENDKAEKLVREMIARGLL 545



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 123/481 (25%), Positives = 218/481 (45%), Gaps = 8/481 (1%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           S  N +  +H  P  ++   + ++I   N+K     + ++ QM +  + P      +++N
Sbjct: 44  SQFNHMFHVHPTP--HTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNIIIN 101

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
                    + +    K+++LG   N    N L+   C    V +  +   ++  +  R 
Sbjct: 102 CFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRL 161

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
              +Y  LI   CK G    A+ +  R+ER  I P++V Y+ +I   C++  + EA  L+
Sbjct: 162 SGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLY 221

Query: 294 RDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
            ++  KG +P+ VTY+ L+ G+C    L  A+ L   M  + + P + TY  ++  LCKE
Sbjct: 222 TEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKE 281

Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
           G++++A  +L  M +  +  D V  +TL++ YC + +  +A +V   M + G+  D   Y
Sbjct: 282 GKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCY 341

Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
             +I+G CK K +D A  L   +      P   +Y+ L+D  C       +  L DE + 
Sbjct: 342 SIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLD 401

Query: 472 RGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKA 531
           RG   DV  Y  LI   CK   +D A  LFN M+   I  +   +T L     + G  K 
Sbjct: 402 RGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKN 461

Query: 532 CSDILDDMYRRRLMITLKIYRSFSASYAKD---NEILDLFWSHVVDRGLMSKHIFKEMQL 588
             +   D+  +   + ++ Y        K+   +E L L  S + D G +S  +  E+ +
Sbjct: 462 ALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALAL-QSRMEDNGCISDAVTFEIMI 520

Query: 589 R 589
           R
Sbjct: 521 R 521



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 117/389 (30%), Positives = 179/389 (46%), Gaps = 16/389 (4%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D +  F+ M   +  PH      +L SL   +       +YK+M    V  +    N++I
Sbjct: 41  DAVSQFNHMFHVHPTPHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNIII 100

Query: 208 HACC-------KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDR 260
           +  C         S V K+ KL         + +  T NTL+   C +G   EAL   D+
Sbjct: 101 NCFCHFGQVVLAFSGVSKILKL-------GYQPNTITLNTLMKGLCLEGKVKEALRFHDK 153

Query: 261 MEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRAND 318
           +  +G     ++Y  LI+G C+ G  R A RL R I+     PN V Y+ +ID  C+   
Sbjct: 154 VLAQGFRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTL 213

Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT 378
           ++EA  L   M  KG+ P VVTY+ ++   C  G++  A  LLNEM  + I PD  T   
Sbjct: 214 VDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTI 273

Query: 379 LINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAG 438
           L++A CK G    A  V   M++A + LD   Y  L+ G+C   E++ AK + + M   G
Sbjct: 274 LVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMG 333

Query: 439 FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQ 498
            +P    YS +++G C     +  L L +E   + +  D   Y +LI   CK  ++ Y  
Sbjct: 334 VTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVW 393

Query: 499 RLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
            LF+ M   G   D + Y +L  A  + G
Sbjct: 394 DLFDEMLDRGQPPDVITYNNLIDALCKNG 422



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 63/298 (21%), Positives = 119/298 (39%), Gaps = 57/298 (19%)

Query: 54  CHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIA-------- 105
           C +  L+ A     E  + N    + ++  ++  L K    K A+N+L  +         
Sbjct: 244 CIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDV 303

Query: 106 ------------LRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVF 153
                       + +  +   V   + ++   PD   H  S ++     +K   + L +F
Sbjct: 304 VVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPD--VHCYSIMINGLCKIKRVDEALNLF 361

Query: 154 DQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKS 213
           +++   N++P     T L++ L K      VW ++ +M+  G   ++  YN LI A CK+
Sbjct: 362 EEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKN 421

Query: 214 SDVDKVEKLLCEMEFKDVRADLFT-----------------------------------Y 238
             +D+   L  +M+ + +R +++T                                   Y
Sbjct: 422 GHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTY 481

Query: 239 NTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI 296
             +I   CK+G+  EALA+Q RME  G   D VT+  +I  F  +    +A +L R++
Sbjct: 482 TVMINGLCKEGLLDEALALQSRMEDNGCISDAVTFEIMIRAFFDKDENDKAEKLVREM 539



 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 51/244 (20%), Positives = 90/244 (36%), Gaps = 35/244 (14%)

Query: 356 DANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALI 415
           DA    N M      P     N ++ +   +    +A+ +  +M  + +  D FT   +I
Sbjct: 41  DAVSQFNHMFHVHPTPHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNIII 100

Query: 416 HGFCKAKEMDIAKELLFGMLDAGFSP---------------------------------- 441
           + FC   ++ +A   +  +L  G+ P                                  
Sbjct: 101 NCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFR 160

Query: 442 -SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRL 500
            S  SY  L++G C      A ++LL       +  +V +Y  +I R CK   VD A  L
Sbjct: 161 LSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDL 220

Query: 501 FNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAK 560
           +  M G GI  D V Y+ L   +   G+     D+L++M    +   +  Y     +  K
Sbjct: 221 YTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCK 280

Query: 561 DNEI 564
           + ++
Sbjct: 281 EGKV 284


>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
 gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 141/508 (27%), Positives = 235/508 (46%), Gaps = 17/508 (3%)

Query: 57  PSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSV- 115
           P+++  FF       P +KH+++SH  ++ IL  N  F       EKI +    +  SV 
Sbjct: 99  PNIALQFFNSLPLIKPGFKHTVKSHSFLLKILIPNNLFGVG----EKIRISMIKACVSVD 154

Query: 116 -----LNALVKIHDDPDGNSHVLS-----WLVIFYANLKMTQDGLQVFDQMRVHNLMPHL 165
                L+ L +++ D +     LS      L++  A   M  +  +V+ +M    ++P++
Sbjct: 155 DIRFLLDFLRQMNRDDNDIKFKLSVRSYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNI 214

Query: 166 HACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCE 225
           +    ++N+ +K            K+ Q G+  +   Y  LI   C+++DV+   K+   
Sbjct: 215 YTLNTMVNAYSKMGNIVEANLYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNM 274

Query: 226 MEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGR 285
           M  K  R +  +Y T+I   C+ G   E +++  +M  +   P + TY  +IH      R
Sbjct: 275 MPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDR 334

Query: 286 MREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNS 343
             E   LF +++     PN  TYT ++D  C+   L+E+ R+   M  KG+ P VVTYN+
Sbjct: 335 NLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNA 394

Query: 344 ILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAG 403
           ++R  C+EGRI  A  +L  M      P+  T N LI  + K      AM + ++MLE+ 
Sbjct: 395 LIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESK 454

Query: 404 LMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALL 463
           L     TY +LIH  CKA   D A +LL  + + G  P   +YS  +D  C     E   
Sbjct: 455 LTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEAC 514

Query: 464 KLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAY 523
            L +    +G+  +  +Y ALI   CK  K+D A  L   M     L +S  Y SL Y  
Sbjct: 515 DLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGV 574

Query: 524 WRAGEPKACSDILDDMYRRRLMITLKIY 551
            + G+ +    ++++M +  +  T+  Y
Sbjct: 575 CKEGKVQEGLSMVENMSKMGVKPTVATY 602



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 113/232 (48%), Gaps = 2/232 (0%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           ++ D ++ + L+P     +V +++L K +  +    ++  + + G+ AN  +Y  LI   
Sbjct: 480 KLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGH 539

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           CK+  +D+   LL  M  +D   +  TYN+LI   CK+G   E L++ + M + G+ P +
Sbjct: 540 CKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTV 599

Query: 271 VTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREV 328
            TY  LI    REG    A R+F  +   G  P+  TYT  I  YC + +++EA  +   
Sbjct: 600 ATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMAR 659

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLI 380
           M   GV P  +TY  ++    + G   DA  +L  M +    P +   N LI
Sbjct: 660 MIEAGVMPDSLTYTLLISAYERLGLAYDAFNVLKRMLDAGCDPSHPIWNNLI 711



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 119/257 (46%), Gaps = 2/257 (0%)

Query: 305 TYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM 364
           +Y  L+    R   ++E  R+   M    + P + T N+++    K G I +AN  ++++
Sbjct: 181 SYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANLYVSKI 240

Query: 365 NEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEM 424
            +  ++PD+ T  +LI  YC+  D  SA KV N M   G   ++ +Y  +IHG C+A  +
Sbjct: 241 FQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRI 300

Query: 425 DIAKELLFGMLDAGFSPSYCSYSWLVDG-YCNKNNEEALLKLLDEFVSRGLCVDVSVYRA 483
           D    L   M +    P+  +Y+ ++   + N  N E  + L +E   R    +V  Y  
Sbjct: 301 DEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEG-MDLFNEMRERSCEPNVHTYTV 359

Query: 484 LIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRR 543
           ++   CK+ K+D ++R+ N M   G++   V Y +L   Y   G  +A  +IL  M    
Sbjct: 360 MVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNN 419

Query: 544 LMITLKIYRSFSASYAK 560
                + Y      ++K
Sbjct: 420 CRPNERTYNELICGFSK 436



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 64/131 (48%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           Q+GL + + M    + P +   T+L+  + ++   D   +V+ +MV  G   +++ Y   
Sbjct: 581 QEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAF 640

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           IH  C S +V + E ++  M    V  D  TY  LI+ Y + G+ Y+A  V  RM   G 
Sbjct: 641 IHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFNVLKRMLDAGC 700

Query: 267 SPDIVTYNSLI 277
            P    +N+LI
Sbjct: 701 DPSHPIWNNLI 711


>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
 gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 121/400 (30%), Positives = 197/400 (49%), Gaps = 3/400 (0%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           +++FD M      P  +  T ++N L K   T +   ++KKM + G   N+  Y+ LIH+
Sbjct: 65  VELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHS 124

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
            CK   V++   +   M+ KD+   +FTY +LI   C      EA A+ + M    I P+
Sbjct: 125 LCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPN 184

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLRE 327
           +VT+N L+  FC+EG++  A  + + +   G  P+ VTY +L+ GY    ++ EA +L +
Sbjct: 185 VVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFD 244

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
           VM  KG  P V +Y+ ++   CK  RI +A +L NEM  +   P+NV+ NTLI+  C++G
Sbjct: 245 VMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLG 304

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
               A  +   M   G + + +TY  L+ GFCK   +  A  L   M      P+   Y+
Sbjct: 305 RLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYN 364

Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGN 507
            LV+  C   N +   +L  E    GL  +V +Y  +I   CK+  +D A   F  M+ +
Sbjct: 365 ILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDD 424

Query: 508 GILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMIT 547
           G   D   Y  +   + +  +      ++ +M R R  IT
Sbjct: 425 GCPPDEFSYNVIIRGFLQHKDESRAVHLIGEM-RDRGFIT 463



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 124/418 (29%), Positives = 205/418 (49%), Gaps = 5/418 (1%)

Query: 156 MRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSD 215
           M +  L P+     +L+N   + +  D+ + V  K ++LG+   I  +  LI+   K   
Sbjct: 1   MELAGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGK 60

Query: 216 VDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNS 275
             +  +L  +M  +  + D +TY T+I   CK G    A  +  +ME  G   ++VTY++
Sbjct: 61  FAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYST 120

Query: 276 LIHGFCREGRMREARRLFRDIKGA--TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKG 333
           LIH  C+  R+ EA  +F  +K    +P   TYT+LI G C  +  +EA  L   M +  
Sbjct: 121 LIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLN 180

Query: 334 VYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAM 393
           + P VVT+N ++   CKEG++  A  +L  M E  + PD VT N+L+  Y    +   A 
Sbjct: 181 IMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEAR 240

Query: 394 KVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGY 453
           K+ + M+  G   D F+Y  LI+G+CKAK +D AK+L   M+  G +P+  SY+ L+ G 
Sbjct: 241 KLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGL 300

Query: 454 CNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDS 513
           C          L     + G   ++  Y  L+  FCK+  +  A RLF  MQ   +  + 
Sbjct: 301 CQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNL 360

Query: 514 VIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKD---NEILDLF 568
           V+Y  L  A  ++G  K   ++  +++   L   ++IY +      K+   +E L+ F
Sbjct: 361 VMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAF 418



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 123/452 (27%), Positives = 209/452 (46%), Gaps = 21/452 (4%)

Query: 50  LYNC-CHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALR- 107
           L NC C +  +   F   A+      + ++ +  T+I+ L K   F  A  + + +  R 
Sbjct: 16  LINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQAVELFDDMVARG 75

Query: 108 ---DFLSTPSVLNALVKIHD------------DPDGNSHVLSWLVIFYA--NLKMTQDGL 150
              D  +  +++N L KI +            +     +V+++  + ++    +   + L
Sbjct: 76  CQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHSLCKYRRVNEAL 135

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
            +F  M+  ++ P +   T L+  L           +  +M  L ++ N+  +NVL+   
Sbjct: 136 DIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTF 195

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           CK   V   E +L  M    V  D+ TYN+L+  Y       EA  + D M  +G  PD+
Sbjct: 196 CKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDV 255

Query: 271 VTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
            +Y+ LI+G+C+  R+ EA++LF ++  +G+TPN+V+Y TLI G C+   L EA  L + 
Sbjct: 256 FSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKN 315

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M   G  P + TY  +L   CK+G +  A RL   M    + P+ V  N L+NA CK G+
Sbjct: 316 MHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGN 375

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
              A ++ + +   GL  +   Y  +I+G CK   +D A E    M D G  P   SY+ 
Sbjct: 376 LKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNV 435

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSV 480
           ++ G+    +E   + L+ E   RG   D   
Sbjct: 436 IIRGFLQHKDESRAVHLIGEMRDRGFITDAGT 467



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 113/393 (28%), Positives = 196/393 (49%), Gaps = 21/393 (5%)

Query: 58  SLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLN 117
           +L+   FK  E A    + ++ ++ T+IH L K +    A ++   +  +D   T     
Sbjct: 97  ALAAGLFKKMEEA--GCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYT 154

Query: 118 ALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAK 177
           +L++      G  +   W           ++   + ++M   N+MP++    VL+++  K
Sbjct: 155 SLIQ------GLCNFSRW-----------KEASALLNEMTSLNIMPNVVTFNVLVDTFCK 197

Query: 178 DRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFT 237
           +        V K M ++GV  ++  YN L++     ++V +  KL   M  K  + D+F+
Sbjct: 198 EGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFS 257

Query: 238 YNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI- 296
           Y+ LI  YCK     EA  + + M  +G +P+ V+YN+LIHG C+ GR+REA+ LF+++ 
Sbjct: 258 YSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMH 317

Query: 297 -KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIR 355
             G  PN  TY  L+DG+C+   L +A RL   M +  + P +V YN ++  +CK G ++
Sbjct: 318 TNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLK 377

Query: 356 DANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALI 415
           DA  L +E+    + P+     T+IN  CK G    A++    M + G   D+F+Y  +I
Sbjct: 378 DARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNVII 437

Query: 416 HGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
            GF + K+   A  L+  M D GF     + +W
Sbjct: 438 RGFLQHKDESRAVHLIGEMRDRGFITDAGTTAW 470


>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
          Length = 742

 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 121/417 (29%), Positives = 193/417 (46%), Gaps = 2/417 (0%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           + ++M    + P     T L+    ++   +   +V  +M+++G  A     NVLI+  C
Sbjct: 203 MLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYC 262

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           K   V+     + +        D  TYNT +   C+      AL V D M +EG  PD+ 
Sbjct: 263 KLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVF 322

Query: 272 TYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           TYN +++  C+ G++ EA+ +   +  +G  P+  T+ TLI   C  N LEEAL L   +
Sbjct: 323 TYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQV 382

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
             KGV P V T+N ++  LCK G    A RL  EM      PD VT NTLI+  C +G  
Sbjct: 383 TVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKL 442

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
             A+ +   M   G      TY  +I G CK   ++ A+E+   M   G S +  +++ L
Sbjct: 443 GKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTL 502

Query: 450 VDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGI 509
           +DG C     +   +L+++ +S GL  +   Y +++  +CK+  +  A  +   M  NG 
Sbjct: 503 IDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGF 562

Query: 510 LGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
             D V Y +L     +AG  +    +L  M  + +  T K Y     S  + N I D
Sbjct: 563 EVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRD 619



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 137/511 (26%), Positives = 238/511 (46%), Gaps = 21/511 (4%)

Query: 66  WAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRD--------------FLS 111
           ++E      K  + +  T++  L +    ++A  MLE+++ R               F+ 
Sbjct: 169 YSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVE 228

Query: 112 TPSVLNAL-VKIHDDPDGNSHV---LSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHA 167
             S+  AL VK      G S     ++ L+  Y  L   +D L    Q       P    
Sbjct: 229 EGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQIT 288

Query: 168 CTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEME 227
               +N L ++       KV   MVQ G   ++  YN++++  CK+  +++ + +L +M 
Sbjct: 289 YNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMV 348

Query: 228 FKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMR 287
            +    D+ T+NTLIA  C      EAL +  ++  +G+SPD+ T+N LI+  C+ G   
Sbjct: 349 DRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPH 408

Query: 288 EARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSIL 345
            A RLF ++K  G TP+ VTY TLID  C    L +AL L + M + G     +TYN+I+
Sbjct: 409 LALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTII 468

Query: 346 RKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLM 405
             LCK+ RI +A  + ++M+ + I+ + +T NTLI+  CK      A ++ N+M+  GL 
Sbjct: 469 DGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQ 528

Query: 406 LDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKL 465
            +  TY +++  +CK  ++  A ++L  M   GF     +Y  L++G C     +  LK+
Sbjct: 529 PNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKV 588

Query: 466 LDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWR 525
           L     +G+      Y  +++   ++  +  A  LF  M   G   D++ Y  +     R
Sbjct: 589 LRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCR 648

Query: 526 AGEP-KACSDILDDMYRRRLMITLKIYRSFS 555
            G P K   D + +M  +  +     +R  +
Sbjct: 649 GGGPIKEAFDFMLEMVDKGFIPEFSSFRMLA 679



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 129/438 (29%), Positives = 212/438 (48%), Gaps = 46/438 (10%)

Query: 148 DGLQVFDQ---MRVHNLMP--HLHACTV----LLNSLAKDRLTDMVWKVYKKMVQLGVVA 198
           +G Q+FD    + ++ L P   + A TV    LLN L +     ++  VY +M   G+  
Sbjct: 120 EGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKP 179

Query: 199 NIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQ 258
           ++  +N L+ A C++  V     +L EM  + V  D  T+ TL+  + ++G    AL V+
Sbjct: 180 DVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVK 239

Query: 259 DRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRA 316
            RM   G S   VT N LI+G+C+ GR+ +A    +     G  P+ +TY T ++G C+ 
Sbjct: 240 ARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQN 299

Query: 317 NDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE---------- 366
           + +  AL++ +VM  +G  P V TYN ++  LCK G++ +A  +LN+M +          
Sbjct: 300 DHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTF 359

Query: 367 -------------------------KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLE 401
                                    K ++PD  T N LINA CK+GD   A+++   M  
Sbjct: 360 NTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKN 419

Query: 402 AGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEA 461
           +G   D+ TY  LI   C   ++  A +LL  M   G   S  +Y+ ++DG C K   E 
Sbjct: 420 SGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEE 479

Query: 462 LLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAY 521
             ++ D+   +G+  +   +  LI   CK +K+D A  L N M   G+  +++ Y S+  
Sbjct: 480 AEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILT 539

Query: 522 AYWRAGEPKACSDILDDM 539
            Y + G+ K  +DIL+ M
Sbjct: 540 HYCKQGDIKKAADILETM 557



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 120/412 (29%), Positives = 194/412 (47%), Gaps = 25/412 (6%)

Query: 170 VLLNSLAK-DRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEF 228
           VL+N   K  R+ D +  + +++   G   +   YN  ++  C++  V    K++  M  
Sbjct: 256 VLINGYCKLGRVEDALGYIQQEIAD-GFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQ 314

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
           +    D+FTYN ++   CK G   EA  + ++M   G  PDI T+N+LI   C   R+ E
Sbjct: 315 EGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEE 374

Query: 289 ARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILR 346
           A  L R +  KG +P+  T+  LI+  C+  D   ALRL E M   G  P  VTYN+++ 
Sbjct: 375 ALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLID 434

Query: 347 KLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLML 406
            LC  G++  A  LL +M         +T NT+I+  CK      A +V ++M   G+  
Sbjct: 435 NLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISR 494

Query: 407 DQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLL 466
           +  T+  LI G CK K++D A EL+  M+  G  P+  +Y+ ++  YC + + +    +L
Sbjct: 495 NAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADIL 554

Query: 467 DEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRA 526
           +   + G  VDV  Y  LI   CK  +   A ++   M+  G+                 
Sbjct: 555 ETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGM----------------R 598

Query: 527 GEPKACSDILDDMYRR-RLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGL 577
             PKA + +L  ++RR  +   L ++R      A+  E  D     +V RGL
Sbjct: 599 PTPKAYNPVLQSLFRRNNIRDALSLFREM----AEVGEPPDALTYKIVFRGL 646



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 122/462 (26%), Positives = 203/462 (43%), Gaps = 61/462 (13%)

Query: 46  VLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIA 105
           VL+N Y  C +  +  A     +     ++    ++ T ++ L +N H   A        
Sbjct: 256 VLINGY--CKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHAL------- 306

Query: 106 LRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQ--DGLQVFDQMRVHNLMP 163
                    V++ +V+   DPD    V ++ ++     K  Q  +   + +QM     +P
Sbjct: 307 --------KVMDVMVQEGHDPD----VFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLP 354

Query: 164 HLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLL 223
            +     L+ +L      +    + +++   GV  +++ +N+LI+A CK  D     +L 
Sbjct: 355 DITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLF 414

Query: 224 CEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCRE 283
            EM+      D  TYNTLI   C  G   +AL +   ME  G     +TYN++I G C++
Sbjct: 415 EEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKK 474

Query: 284 GRMREARRLFR--DIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTY 341
            R+ EA  +F   D++G + N +T+ TLIDG C+   +++A  L   M ++G+ P  +TY
Sbjct: 475 MRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITY 534

Query: 342 NSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKV------ 395
           NSIL   CK+G I+ A  +L  M       D VT  TLIN  CK G T  A+KV      
Sbjct: 535 NSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRI 594

Query: 396 -------------------KN----------RMLEAGLMLDQFTYKALIHGFCKAK-EMD 425
                              +N           M E G   D  TYK +  G C+    + 
Sbjct: 595 KGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIK 654

Query: 426 IAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLD 467
            A + +  M+D GF P + S+  L +G  N   ++  ++ ++
Sbjct: 655 EAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGMDDYFIRAIE 696



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 75/273 (27%), Positives = 132/273 (48%), Gaps = 18/273 (6%)

Query: 261 MEREGISPDIVTYNSLIHGFCREGRMREARRLFRD-----------IKGATPNHVTYTTL 309
           M REG    +   +S +  +       E ++LF D           + G   + V Y  L
Sbjct: 100 MRREGHQVKLGVVHSFLDSY-------EGQQLFDDAVDLILNQLQPLFGIQADTVVYNHL 152

Query: 310 IDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI 369
           ++     + ++    +   M A+G+ P VVT+N++++ LC+  ++R A  +L EM+ + +
Sbjct: 153 LNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGV 212

Query: 370 APDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKE 429
           APD  T  TL+  + + G   +A++VK RMLE G    + T   LI+G+CK   ++ A  
Sbjct: 213 APDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALG 272

Query: 430 LLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFC 489
            +   +  GF P   +Y+  V+G C  ++    LK++D  V  G   DV  Y  ++   C
Sbjct: 273 YIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLC 332

Query: 490 KKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYA 522
           K  +++ A+ + N M   G L D   + +L  A
Sbjct: 333 KNGQLEEAKGILNQMVDRGCLPDITTFNTLIAA 365



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 60/248 (24%), Positives = 112/248 (45%), Gaps = 3/248 (1%)

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
           L L ++    G+    V YN +L  L +  +++    + +EM  + I PD VT NTL+ A
Sbjct: 131 LILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKA 190

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
            C+     +A+ +   M   G+  D+ T+  L+ GF +   ++ A  +   ML+ G S +
Sbjct: 191 LCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSAT 250

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             + + L++GYC     E  L  + + ++ G   D   Y   +   C+ + V +A ++ +
Sbjct: 251 KVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMD 310

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDN 562
           +M   G   D   Y  +     + G+ +    IL+ M  R  +  +  + +  A+    N
Sbjct: 311 VMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGN 370

Query: 563 ---EILDL 567
              E LDL
Sbjct: 371 RLEEALDL 378



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/213 (21%), Positives = 88/213 (41%), Gaps = 3/213 (1%)

Query: 318 DLEEALR-LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTC 376
           D + ALR L   +A     PG   Y  I+RKL   G +     L+ EM  +         
Sbjct: 53  DPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVV 112

Query: 377 NTLINAY--CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGM 434
           ++ +++Y   ++ D A  + +       G+  D   Y  L++   +  +M + + +   M
Sbjct: 113 HSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEM 172

Query: 435 LDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKV 494
              G  P   +++ L+   C  +     + +L+E  SRG+  D + +  L++ F ++  +
Sbjct: 173 GARGIKPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSI 232

Query: 495 DYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
           + A R+   M   G     V    L   Y + G
Sbjct: 233 EAALRVKARMLEMGCSATKVTVNVLINGYCKLG 265


>gi|255585033|ref|XP_002533225.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526957|gb|EEF29157.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 605

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 129/465 (27%), Positives = 226/465 (48%), Gaps = 11/465 (2%)

Query: 85  IHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNS-----HVLSWLVIF 139
           I ++ K KHF    + +    + D L     LN    +  D   N      +  + LV  
Sbjct: 68  IGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNTFNILVSG 127

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
           Y  L   ++  +V D M  +N++P +   T L+  L KD   D  +++  +M  L ++ +
Sbjct: 128 YCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEMENLKLLPH 187

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
           +  YN+LI+ C + S   K  +L+ EME K V+ +  TYN ++  Y K+G    A     
Sbjct: 188 VVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELR 247

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRAN 317
           +ME  G SPD VT+N+L +G+C+ GR+ EA R+  ++  KG   N VT  T++   C   
Sbjct: 248 KMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGER 307

Query: 318 DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCN 377
            L++A +L    + +G +   V+Y +++    K G+    +   +EM EK+I P  +T  
Sbjct: 308 KLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKVGK----SXXWDEMKEKEIIPSIITYG 363

Query: 378 TLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA 437
           T+I   C+ G T  ++   N +LE+GL+ DQ TY  +I G+C+  ++D A      M+  
Sbjct: 364 TMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGYCREGQVDKAFHFRNKMVKK 423

Query: 438 GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYA 497
            F P   + + LV G C +   +  LKL   ++S+G  +D   +  +I   C++ + + A
Sbjct: 424 SFKPDLFTCNILVRGLCTEGMLDKALKLFKTWISKGKAIDAVTFNTIISGLCEEGRFEEA 483

Query: 498 QRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRR 542
             L   M+   +  D   + ++  A   AG  K   + +  +  +
Sbjct: 484 FDLLAEMEEKKLGPDCYTHNAILSALADAGRMKEAEEFMSGIVEQ 528



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 124/468 (26%), Positives = 210/468 (44%), Gaps = 66/468 (14%)

Query: 157 RVHNLMPHLHACTVLLNSLAKDRLTDMVW---KVYKKMVQLGVVANIHLYNVLIHACCKS 213
           R+H L P+L     L+ +L +      V+    ++  +++LGV  N + +N+LI  CC  
Sbjct: 3   RLH-LKPNLLTLNTLIKALVRYPSKPSVYLSKAIFSDVIKLGVEVNTNTFNILICGCCIE 61

Query: 214 SDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTY 273
           + + +   L+ +M+      D  +YNT++ + CKKG   EA  +   M+  G+ P+  T+
Sbjct: 62  NKLSEAIGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNTF 121

Query: 274 NSLIHGFCREGRMREARRLFRDI---KGATPNHVTYTTLIDGYCRANDLEEALRLR---- 326
           N L+ G+C+ G ++EA  +  DI       P+  TYTTLI G C+   ++EA RLR    
Sbjct: 122 NILVSGYCKLGWLKEAAEVI-DIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEME 180

Query: 327 -------------------------------EVMAAKGVYPGVVTYNSILRKLCKEGRIR 355
                                          + M  KGV P  VTYN +++   KEG++ 
Sbjct: 181 NLKLLPHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMD 240

Query: 356 DANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALI 415
           +A   L +M E   +PD VT NTL N YCK G  + A ++ + M   GL ++  T   ++
Sbjct: 241 NAGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTIL 300

Query: 416 HGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLC 475
           H  C  +++D A +LL      G+     SY  L+ GY             DE   + + 
Sbjct: 301 HTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKVGKSXX----WDEMKEKEII 356

Query: 476 VDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDI 535
             +  Y  +I   C+  K D +    N +  +G++ D   Y ++   Y R G+       
Sbjct: 357 PSIITYGTMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGYCREGQ------- 409

Query: 536 LDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIF 583
           +D  +  R  +  K ++             DLF  +++ RGL ++ + 
Sbjct: 410 VDKAFHFRNKMVKKSFKP------------DLFTCNILVRGLCTEGML 445



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/368 (29%), Positives = 182/368 (49%), Gaps = 13/368 (3%)

Query: 191 MVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDV-----RADLFTYNTLIALY 245
           M +L +  N+   N LI A  +      V   L +  F DV       +  T+N LI   
Sbjct: 1   MKRLHLKPNLLTLNTLIKALVRYPSKPSV--YLSKAIFSDVIKLGVEVNTNTFNILICGC 58

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNH 303
           C +    EA+ +  +M+     PD V+YN+++   C++G++ EAR L  D+K  G  PN 
Sbjct: 59  CIENKLSEAIGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNR 118

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
            T+  L+ GYC+   L+EA  + ++MA   V P V TY +++  LCK+G+I +A RL +E
Sbjct: 119 NTFNILVSGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDE 178

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
           M   K+ P  VT N LIN   +   +    ++ + M   G+  +  TY  ++  + K  +
Sbjct: 179 MENLKLLPHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGK 238

Query: 424 MDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRA 483
           MD A   L  M ++GFSP   +++ L +GYC         +++DE   +GL ++      
Sbjct: 239 MDNAGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNT 298

Query: 484 LIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRR 543
           ++   C + K+D A +L +     G   D V Y +L   Y++ G+    S   D+M  + 
Sbjct: 299 ILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKVGK----SXXWDEMKEKE 354

Query: 544 LMITLKIY 551
           ++ ++  Y
Sbjct: 355 IIPSIITY 362



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 59/242 (24%), Positives = 107/242 (44%), Gaps = 25/242 (10%)

Query: 153 FDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCK 212
           +D+M+   ++P +     ++  L +   TD       ++++ G+V +   YN +I   C+
Sbjct: 347 WDEMKEKEIIPSIITYGTMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGYCR 406

Query: 213 SSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVT 272
              VDK      +M  K  + DLFT N L+   C +GM  +AL +      +G + D VT
Sbjct: 407 EGQVDKAFHFRNKMVKKSFKPDLFTCNILVRGLCTEGMLDKALKLFKTWISKGKAIDAVT 466

Query: 273 YNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMA 330
           +N++I G C EGR  EA  L  ++  K   P+  T+  ++     A  ++EA      + 
Sbjct: 467 FNTIISGLCEEGRFEEAFDLLAEMEEKKLGPDCYTHNAILSALADAGRMKEAEEFMSGIV 526

Query: 331 AKGVY-----------------------PGVVTYNSILRKLCKEGRIRDANRLLNEMNEK 367
            +G                         P  V ++  + +LC +G+ +DA  ++ E  +K
Sbjct: 527 EQGKLQDQTISLNKRKTESSSETSQESDPNSVAFSEQINELCTQGKYKDAMHMIQESTQK 586

Query: 368 KI 369
            I
Sbjct: 587 GI 588


>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
          Length = 722

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 118/380 (31%), Positives = 195/380 (51%), Gaps = 7/380 (1%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           ++ D+M +    P+     VL++ L +    D    +  K+       N+ L+N LI+  
Sbjct: 308 KLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPN----PNVVLFNTLINGY 363

Query: 211 CKSSDVDKVEKLLCE-MEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
                +D+ + ++ E M       D+FTYNTLI   CKKG    A  + + M+ +G  P+
Sbjct: 364 VSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPN 423

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLRE 327
           ++TY  LI  FC+EGR+ EAR +  ++  KG   N V Y  LI   C+   +++AL +  
Sbjct: 424 VITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFG 483

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
            M++KG  P + T+NS++  LCK  +  +A  L  +M  + +  + +T NTLI+A+ + G
Sbjct: 484 DMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRG 543

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
               A+K+ N ML  G  LD  TY  LI   C+A  ++    L   M+  G +P+  S +
Sbjct: 544 AMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCN 603

Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGN 507
            L++G C   N +  L+ L + + RGL  D+  Y +LI   CK  +   A  LF+ +Q  
Sbjct: 604 ILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVE 663

Query: 508 GILGDSVIYTSLAYAYWRAG 527
           GI  D++ Y +L   + + G
Sbjct: 664 GICPDAITYNTLISWHCKEG 683



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 109/367 (29%), Positives = 187/367 (50%), Gaps = 7/367 (1%)

Query: 169 TVLLNSL-----AKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLL 223
            VL N+L     ++ RL +    +++ M+ +G   +I  YN LI   CK   +    +L+
Sbjct: 353 VVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELM 412

Query: 224 CEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCRE 283
            EM+ K    ++ TY  LI  +CK+G   EA  V D M  +G++ + V YN LI   C++
Sbjct: 413 NEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKD 472

Query: 284 GRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTY 341
            ++++A  +F D+  KG  P+  T+ +LI G C+ N  EEAL L + M  +GV    +TY
Sbjct: 473 EKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITY 532

Query: 342 NSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLE 401
           N+++    + G +++A +L+N+M  +    D++T N LI A C+ G+    + +   M+ 
Sbjct: 533 NTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMS 592

Query: 402 AGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEA 461
            GL  +  +   LI+G C+   +  A E L  M+  G +P   +Y+ L++G C     + 
Sbjct: 593 KGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQE 652

Query: 462 LLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAY 521
            L L D+    G+C D   Y  LI   CK+   D A  L +    +G + + V +  L  
Sbjct: 653 ALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVS 712

Query: 522 AYWRAGE 528
            + + G+
Sbjct: 713 NFIKEGD 719



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 102/312 (32%), Positives = 164/312 (52%), Gaps = 2/312 (0%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           ++ ++M++    P++   T+L++   K+   +    V  +M   G+  N   YN LI A 
Sbjct: 410 ELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISAL 469

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           CK   V     +  +M  K  + D+FT+N+LI   CK     EAL +   M  EG+  + 
Sbjct: 470 CKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANT 529

Query: 271 VTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
           +TYN+LIH F R G M+EA +L  D+  +G   + +TY  LI   CRA ++E+ L L E 
Sbjct: 530 ITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFED 589

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M +KG+ P  ++ N ++  LC+ G I+ A   L +M  + + PD VT N+LIN  CK G 
Sbjct: 590 MMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGR 649

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
              A+ + +++   G+  D  TY  LI   CK    D A  LL   +D+GF P+  ++  
Sbjct: 650 AQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYI 709

Query: 449 LVDGYCNKNNEE 460
           LV  +  + ++E
Sbjct: 710 LVSNFIKEGDQE 721



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 143/559 (25%), Positives = 233/559 (41%), Gaps = 58/559 (10%)

Query: 25  HWAKLLNP----NIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQS 80
            W +LL P     + +SLT    +++   L     +P+ S   F+WA +    Y H    
Sbjct: 56  EWERLLKPFDLPELRTSLTRITPYQLCKLLELPLDVPT-SMELFQWAGTQ-KGYCHMFDV 113

Query: 81  HWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFY 140
           ++ +I  L     FK+   +L ++     +   S+   ++K                  Y
Sbjct: 114 YYMLIDKLGAAGEFKTIDALLMQMKQEGIVFRESLFILIMK-----------------HY 156

Query: 141 ANLKMTQDGLQVFDQMR-VHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
               +     ++   MR V++  P   +  V+L+ L       +V  V+ +M+  G+   
Sbjct: 157 GRAGLPGQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPT 216

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
           ++ + V++ A C  ++VD    LL +M       +   Y TLI    K G   E L + +
Sbjct: 217 VYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLE 276

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRAN 317
            M   G  PD+ T+N  IHG C+  R+ EA +L     ++G TPN  TY  L+ G CR  
Sbjct: 277 EMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMG 336

Query: 318 DLEEALRL--------------------------------REVMAAKGVYPGVVTYNSIL 345
            ++EA  L                                 E M + G  P + TYN+++
Sbjct: 337 KVDEARMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLI 396

Query: 346 RKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLM 405
             LCK+G +  A  L+NEM  K   P+ +T   LI+ +CK G    A  V + M   GL 
Sbjct: 397 LGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLA 456

Query: 406 LDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKL 465
           L+   Y  LI   CK +++  A  +   M   G  P   +++ L+ G C  N  E  L L
Sbjct: 457 LNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGL 516

Query: 466 LDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWR 525
             + +  G+  +   Y  LI  F ++  +  A +L N M   G   D + Y  L  A  R
Sbjct: 517 YQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCR 576

Query: 526 AGEPKACSDILDDMYRRRL 544
           AG  +    + +DM  + L
Sbjct: 577 AGNIEKGLALFEDMMSKGL 595



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 71/138 (51%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           + GL +F+ M    L P+  +C +L+N L +        +  + M+  G+  +I  YN L
Sbjct: 581 EKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSL 640

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           I+  CK+    +   L  +++ + +  D  TYNTLI+ +CK+GM  +A  +  R    G 
Sbjct: 641 INGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGF 700

Query: 267 SPDIVTYNSLIHGFCREG 284
            P+ VT+  L+  F +EG
Sbjct: 701 IPNEVTWYILVSNFIKEG 718


>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
          Length = 962

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 141/507 (27%), Positives = 241/507 (47%), Gaps = 28/507 (5%)

Query: 48  LNLYNCCHIPSLSCAFFKWAESAVPNYKH--------SLQSHWTMIHILTKNKHFKSAQN 99
            +LY+C  +  +  A F+  E A   YK         SL +  T+I+IL+K    + A+ 
Sbjct: 203 FSLYSCNTL-LIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAEL 261

Query: 100 MLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVH 159
           +L +I   D   +P V                  + L++ +   +       VFD+M   
Sbjct: 262 ILSQIFQYDL--SPDVF---------------TYTSLILGHCRNRNLDLAFGVFDRMVKE 304

Query: 160 NLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKV 219
              P+    + L+N L  +   D    + ++M++ G+   ++ Y + I A C     ++ 
Sbjct: 305 GCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEA 364

Query: 220 EKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHG 279
            +L+  M+ +  R ++ TY  LI+   + G    A+ +  +M +EG+ P+ VTYN+LI+ 
Sbjct: 365 IELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINE 424

Query: 280 FCREGRMREARRLFR--DIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPG 337
            C  GR   A ++F   +  G+  N  TY  +I G C   D+E+A+ L E M   G  P 
Sbjct: 425 LCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPT 484

Query: 338 VVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKN 397
           VVTYN+++     +G + +A RLL+ M E    PD  T N L++ + K G   SA     
Sbjct: 485 VVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQ 544

Query: 398 RMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKN 457
            M+E GL  +  +Y  LI G  K  ++DIA  LL  M + G +P+  SY+ +++G   +N
Sbjct: 545 EMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKEN 604

Query: 458 NEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYT 517
                 K+ D+   +GL  +V  Y  LI   C+  +  +A ++F+ M+    L +   Y+
Sbjct: 605 RFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYS 664

Query: 518 SLAYAYWRAGEPKACSDILDDMYRRRL 544
           SL Y   + G+      +L +M R+ L
Sbjct: 665 SLIYGLCQEGKADEAEILLKEMERKGL 691



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 147/532 (27%), Positives = 238/532 (44%), Gaps = 41/532 (7%)

Query: 63  FFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNM--LEKIALRDFLSTPSVLNALV 120
           FF W  S  P YKH++    +M++ L +++ F  A ++  L   A R+      V + L 
Sbjct: 136 FFYWI-SKRPFYKHNMNCFISMLNRLVRDRVFAPADHIRILMIKACRNEEEIRRVADFLN 194

Query: 121 KIHDDPDGNS-HVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAK-- 177
           +I     G S +  + L+I  A  +M +    ++ QM    + P L     L+N L+K  
Sbjct: 195 EISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKG 254

Query: 178 ---------------------------------DRLTDMVWKVYKKMVQLGVVANIHLYN 204
                                            +R  D+ + V+ +MV+ G   N   Y+
Sbjct: 255 KVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYS 314

Query: 205 VLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMERE 264
            LI+  C    VD+   +L EM  K +   ++TY   I   C      EA+ +  RM++ 
Sbjct: 315 TLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKR 374

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEA 322
           G  P++ TY +LI G  R G++  A  L+  +  +G  PN VTY  LI+  C       A
Sbjct: 375 GCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTA 434

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
           L++   M   G      TYN I++ LC  G I  A  L  +M +    P  VT NTLIN 
Sbjct: 435 LKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLING 494

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           Y   G+  +A ++ + M E G   D++TY  L+ GF K  +++ A      M++ G +P+
Sbjct: 495 YLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPN 554

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             SY+ L+DG+      +  L LL+     G   +V  Y A+I    K+ +   A+++ +
Sbjct: 555 PVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICD 614

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSF 554
            M   G+L + + YT+L     R G  +    I  DM +R+ +  L  Y S 
Sbjct: 615 KMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSL 666



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 123/400 (30%), Positives = 200/400 (50%), Gaps = 2/400 (0%)

Query: 165 LHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLC 224
           L++C  LL  LAK  + +    +YK+M+  G+  ++  +N LI+   K   V + E +L 
Sbjct: 205 LYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILS 264

Query: 225 EMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREG 284
           ++   D+  D+FTY +LI  +C+      A  V DRM +EG  P+ VTY++LI+G C EG
Sbjct: 265 QIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEG 324

Query: 285 RMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYN 342
           R+ EA  +  ++  KG  P   TYT  I   C     EEA+ L   M  +G  P V TY 
Sbjct: 325 RVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYT 384

Query: 343 SILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEA 402
           +++  L + G++  A  L ++M ++ + P+ VT N LIN  C  G  ++A+K+ + M   
Sbjct: 385 ALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGH 444

Query: 403 GLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEAL 462
           G + +  TY  +I G C   +++ A  L   ML  G  P+  +Y+ L++GY  K N    
Sbjct: 445 GSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNA 504

Query: 463 LKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYA 522
            +LLD     G   D   Y  L+  F K  K++ A   F  M   G+  + V YT+L   
Sbjct: 505 ARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDG 564

Query: 523 YWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDN 562
           + + G+      +L+ M        ++ Y +     +K+N
Sbjct: 565 HSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKEN 604



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 126/462 (27%), Positives = 206/462 (44%), Gaps = 26/462 (5%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N    + L+   + L   +  + ++ +M    L+P+      L+N L          K++
Sbjct: 379 NVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIF 438

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
             M   G +AN   YN +I   C   D++K   L  +M        + TYNTLI  Y  K
Sbjct: 439 HWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTK 498

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTY 306
           G    A  + D M+  G  PD  TYN L+ GF + G++  A   F+++   G  PN V+Y
Sbjct: 499 GNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSY 558

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
           TTLIDG+ +   ++ AL L E M   G  P V +YN+++  L KE R  +A ++ ++M E
Sbjct: 559 TTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAE 618

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
           + + P+ +T  TLI+  C+ G T  A K+ + M +   + + +TY +LI+G C+  + D 
Sbjct: 619 QGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADE 678

Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
           A+ LL  M   G +P   +++ L+DG+      +    LL   V  G   +   Y  L++
Sbjct: 679 AEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLK 738

Query: 487 RFCK-----KEKV-------------------DYAQRLFNLMQGNGILGDSVIYTSLAYA 522
              K     +EKV                   +    L   M   G       Y++L   
Sbjct: 739 GLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSG 798

Query: 523 YWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
             R G       ++ DM  R      +IY S   ++ K+ E+
Sbjct: 799 LCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEV 840



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 125/499 (25%), Positives = 209/499 (41%), Gaps = 96/499 (19%)

Query: 149 GLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIH 208
            L++F  M  H  + +      ++  L      +    +++KM+++G +  +  YN LI+
Sbjct: 434 ALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLIN 493

Query: 209 ACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKG------MHYE--------- 253
                 +V+   +LL  M+      D +TYN L++ + K G       +++         
Sbjct: 494 GYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNP 553

Query: 254 --------------------ALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
                               AL++ +RME  G +P++ +YN++I+G  +E R  EA ++ 
Sbjct: 554 NPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKIC 613

Query: 294 RDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
             +  +G  PN +TYTTLIDG CR    + A ++   M  +   P + TY+S++  LC+E
Sbjct: 614 DKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQE 673

Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
           G+  +A  LL EM  K +APD VT  +LI+ +  +G    A  +  RM++ G   +  TY
Sbjct: 674 GKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTY 733

Query: 412 KALIHGFCKA------------------------KEMDIAKELLFGMLDAGFSPSYCSYS 447
             L+ G  K                            +I   LL  M + G  P+  +YS
Sbjct: 734 SVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYS 793

Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVD------------------------------ 477
            LV G C K       +L+ +   RG C D                              
Sbjct: 794 TLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAK 853

Query: 478 -----VSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKAC 532
                +S+YRALI   CK  +V+ AQ LF+ M       D +++T L     + GE   C
Sbjct: 854 GFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLC 913

Query: 533 SDILDDMYRRRLMITLKIY 551
             +L  M  +     ++ Y
Sbjct: 914 MKLLHIMESKNFTPNIQTY 932



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 135/526 (25%), Positives = 229/526 (43%), Gaps = 17/526 (3%)

Query: 44  HKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEK 103
           H  +L   N    P +S  F      AVP  +   Q+  + +  +     +K +  + + 
Sbjct: 58  HSSVLGFLNFSSKPHISSHF------AVPASREPFQAIVSRVCAILSRVQWKGSSELKQ- 110

Query: 104 IALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLV--IFYA-NLKMTQDGLQVFDQMRVHN 160
             L   L    V   +V +H D +       W+    FY  N+      L    + RV  
Sbjct: 111 --LSPQLKAHHVAE-IVAVHKDTESVIQFFYWISKRPFYKHNMNCFISMLNRLVRDRV-- 165

Query: 161 LMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVE 220
             P  H   +++ +   +     V     ++  +G   +++  N L+    K   V+   
Sbjct: 166 FAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGAR 225

Query: 221 KLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGF 280
            L  +M    ++  L T+NTLI +  KKG   EA  +  ++ +  +SPD+ TY SLI G 
Sbjct: 226 NLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGH 285

Query: 281 CREGRMREARRLF-RDIK-GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGV 338
           CR   +  A  +F R +K G  PN VTY+TLI+G C    ++EAL + E M  KG+ P V
Sbjct: 286 CRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTV 345

Query: 339 VTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNR 398
            TY   +  LC      +A  L+  M ++   P+  T   LI+   ++G    A+ + ++
Sbjct: 346 YTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHK 405

Query: 399 MLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNN 458
           ML+ GL+ +  TY ALI+  C       A ++   M   G   +  +Y+ ++ G C   +
Sbjct: 406 MLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGD 465

Query: 459 EEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTS 518
            E  + L ++ +  G    V  Y  LI  +  K  V+ A RL +LM+ NG   D   Y  
Sbjct: 466 IEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNE 525

Query: 519 LAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
           L   + + G+ ++ S    +M    L      Y +    ++KD ++
Sbjct: 526 LVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKV 571



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 101/373 (27%), Positives = 177/373 (47%), Gaps = 36/373 (9%)

Query: 149 GLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIH 208
            L + ++M      P++ +   ++N L+K+       K+  KM + G++ N+  Y  LI 
Sbjct: 574 ALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLID 633

Query: 209 ACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISP 268
             C++       K+  +ME +    +L+TY++LI   C++G   EA  +   MER+G++P
Sbjct: 634 GLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAP 693

Query: 269 DIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLR 326
           D VT+ SLI GF   GR+  A  L R +   G  PN+ TY+ L+ G  +     E L L 
Sbjct: 694 DEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQK-----ECLLLE 748

Query: 327 EVMAAK-----------------------------GVYPGVVTYNSILRKLCKEGRIRDA 357
           E +A +                             G  P + TY++++  LC++GR  +A
Sbjct: 749 EKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEA 808

Query: 358 NRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHG 417
            +L+ +M E+   PD     +L+ A+CK  +   A+K+ + +   G  L    Y+ALI  
Sbjct: 809 EQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICA 868

Query: 418 FCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVD 477
            CKA +++ A+ L   ML+  ++     ++ LVDG   +   +  +KLL    S+    +
Sbjct: 869 LCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPN 928

Query: 478 VSVYRALIRRFCK 490
           +  Y  L R   +
Sbjct: 929 IQTYVILGRELSR 941


>gi|297850744|ref|XP_002893253.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339095|gb|EFH69512.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1147

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 146/567 (25%), Positives = 242/567 (42%), Gaps = 108/567 (19%)

Query: 57  PSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVL 116
           P ++  FF W +    + K S Q+   M+ IL +N     A  + E+      L    + 
Sbjct: 135 PEIAFRFFNWIQRQ-SDVKQSRQAFAAMLEILAENDLMSEAYLVAERSI---NLGMHEID 190

Query: 117 NALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLA 176
           + L+  + D      +L  L+  Y    M +  L  F++M     +P +  C ++L  L 
Sbjct: 191 DLLIDGNFDKLVALKLLDLLLWVYTKKSMAEKCLLSFEKMIRKGFLPSVRNCNIVLRVLR 250

Query: 177 KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEM-----EFKDV 231
             R+ +   +VY+ MV  G++  +  +N ++ +C K+ D+++V+K+  EM     EF +V
Sbjct: 251 DSRMMNKAQEVYETMVMHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEV 310

Query: 232 RADL------------------------------FTYNTLIALYCKKGMHYEALAVQDRM 261
             ++                              +++N LI  YCK+G+  EA  V D M
Sbjct: 311 TYNILINGFSKSGKMEEARRFHGDMQRSGFPVTPYSFNPLIEGYCKQGLFDEAWGVTDEM 370

Query: 262 EREGI-------------------------------SPDIVTYNSLIHGFCREGRMREAR 290
              GI                               +PD+V+YN+L+HG+ +  +  EA 
Sbjct: 371 LNAGIYPTTSTYNIYIRALCEFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMRKFVEAS 430

Query: 291 RLFRDIKGAT--PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
            LF D+K     P+ VTY TLIDG C + +LE A RL+E M ++ +YP V+TY ++L+  
Sbjct: 431 LLFDDLKAGNINPSIVTYNTLIDGLCESGNLEGAQRLKEEMTSQLIYPDVITYTTLLKGF 490

Query: 349 CKEGRIRDANRLLNEMNEKKI------------------------------------APD 372
            K G +  A  + +EM  K I                                    APD
Sbjct: 491 VKNGNLSMATEIYDEMLRKGIKPDGYAYTTRTVGELRLGDSEKAFRLHEEMVAEDHHAPD 550

Query: 373 NVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLF 432
               N  I+  CK+G+   A++ + ++   GL+ D  TY  +I G+ +     +A++L  
Sbjct: 551 LTIYNVRIDGLCKVGNLEKAIEFQRKIFRVGLVPDHVTYTTVIRGYLEKGRFKMARDLYD 610

Query: 433 GMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKE 492
            ML    SPS  +Y  L+ G+      E   +   E   RG+  +V  + AL+   CK  
Sbjct: 611 EMLSKRLSPSVITYFVLIHGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLHGMCKAG 670

Query: 493 KVDYAQRLFNLMQGNGILGDSVIYTSL 519
            +D A R    M+  GI  +   YT L
Sbjct: 671 NIDEAYRYLCKMEEEGISPNKYSYTIL 697



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 91/298 (30%), Positives = 152/298 (51%), Gaps = 3/298 (1%)

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
           +  +I  YN LI   C+S +++  ++L  EM  + +  D+ TY TL+  + K G    A 
Sbjct: 441 INPSIVTYNTLIDGLCESGNLEGAQRLKEEMTSQLIYPDVITYTTLLKGFVKNGNLSMAT 500

Query: 256 AVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGA---TPNHVTYTTLIDG 312
            + D M R+GI PD   Y +   G  R G   +A RL  ++       P+   Y   IDG
Sbjct: 501 EIYDEMLRKGIKPDGYAYTTRTVGELRLGDSEKAFRLHEEMVAEDHHAPDLTIYNVRIDG 560

Query: 313 YCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPD 372
            C+  +LE+A+  +  +   G+ P  VTY +++R   ++GR + A  L +EM  K+++P 
Sbjct: 561 LCKVGNLEKAIEFQRKIFRVGLVPDHVTYTTVIRGYLEKGRFKMARDLYDEMLSKRLSPS 620

Query: 373 NVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLF 432
            +T   LI+ + K G    A +    M + G+  +  T+ AL+HG CKA  +D A   L 
Sbjct: 621 VITYFVLIHGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLHGMCKAGNIDEAYRYLC 680

Query: 433 GMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCK 490
            M + G SP+  SY+ L+  +C+ +  E ++KL  E + + +  D   +RAL +   K
Sbjct: 681 KMEEEGISPNKYSYTILISKHCDLDKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEK 738



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 70/302 (23%), Positives = 140/302 (46%), Gaps = 25/302 (8%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALR----DFLSTPSVLNALVK------- 121
           N   S+ ++ T+I  L ++ + + AQ + E++  +    D ++  ++L   VK       
Sbjct: 440 NINPSIVTYNTLIDGLCESGNLEGAQRLKEEMTSQLIYPDVITYTTLLKGFVKNGNLSMA 499

Query: 122 --IHDD-------PDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNL-MPHLHACTVL 171
             I+D+       PDG ++      +    L  ++   ++ ++M   +   P L    V 
Sbjct: 500 TEIYDEMLRKGIKPDGYAYTTR--TVGELRLGDSEKAFRLHEEMVAEDHHAPDLTIYNVR 557

Query: 172 LNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDV 231
           ++ L K    +   +  +K+ ++G+V +   Y  +I    +         L  EM  K +
Sbjct: 558 IDGLCKVGNLEKAIEFQRKIFRVGLVPDHVTYTTVIRGYLEKGRFKMARDLYDEMLSKRL 617

Query: 232 RADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARR 291
              + TY  LI  + K G   +A      M++ G+ P+++T+N+L+HG C+ G + EA R
Sbjct: 618 SPSVITYFVLIHGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLHGMCKAGNIDEAYR 677

Query: 292 LF--RDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLC 349
                + +G +PN  +YT LI  +C  +  EE ++L + M  K + P   T+ ++ + L 
Sbjct: 678 YLCKMEEEGISPNKYSYTILISKHCDLDKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLE 737

Query: 350 KE 351
           K+
Sbjct: 738 KD 739


>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Vitis vinifera]
          Length = 740

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 118/380 (31%), Positives = 195/380 (51%), Gaps = 7/380 (1%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           ++ D+M +    P+     VL++ L +    D    +  K+       N+ L+N LI+  
Sbjct: 326 KLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPN----PNVVLFNTLINGY 381

Query: 211 CKSSDVDKVEKLLCE-MEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
                +D+ + ++ E M       D+FTYNTLI   CKKG    A  + + M+ +G  P+
Sbjct: 382 VSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPN 441

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLRE 327
           ++TY  LI  FC+EGR+ EAR +  ++  KG   N V Y  LI   C+   +++AL +  
Sbjct: 442 VITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFG 501

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
            M++KG  P + T+NS++  LCK  +  +A  L  +M  + +  + +T NTLI+A+ + G
Sbjct: 502 DMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRG 561

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
               A+K+ N ML  G  LD  TY  LI   C+A  ++    L   M+  G +P+  S +
Sbjct: 562 AMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCN 621

Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGN 507
            L++G C   N +  L+ L + + RGL  D+  Y +LI   CK  +   A  LF+ +Q  
Sbjct: 622 ILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVE 681

Query: 508 GILGDSVIYTSLAYAYWRAG 527
           GI  D++ Y +L   + + G
Sbjct: 682 GICPDAITYNTLISWHCKEG 701



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 102/312 (32%), Positives = 164/312 (52%), Gaps = 2/312 (0%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           ++ ++M++    P++   T+L++   K+   +    V  +M   G+  N   YN LI A 
Sbjct: 428 ELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISAL 487

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           CK   V     +  +M  K  + D+FT+N+LI   CK     EAL +   M  EG+  + 
Sbjct: 488 CKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANT 547

Query: 271 VTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
           +TYN+LIH F R G M+EA +L  D+  +G   + +TY  LI   CRA ++E+ L L E 
Sbjct: 548 ITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFED 607

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M +KG+ P  ++ N ++  LC+ G I+ A   L +M  + + PD VT N+LIN  CK G 
Sbjct: 608 MMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGR 667

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
              A+ + +++   G+  D  TY  LI   CK    D A  LL   +D+GF P+  ++  
Sbjct: 668 AQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYI 727

Query: 449 LVDGYCNKNNEE 460
           LV  +  + ++E
Sbjct: 728 LVSNFIKEGDQE 739



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 143/559 (25%), Positives = 233/559 (41%), Gaps = 58/559 (10%)

Query: 25  HWAKLLNP----NIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQS 80
            W +LL P     + +SLT    +++   L     +P+ S   F+WA +    Y H    
Sbjct: 74  EWERLLKPFDLPELRTSLTRITPYQLCKLLELPLDVPT-SMELFQWAGTQ-KGYCHMFDV 131

Query: 81  HWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFY 140
           ++ +I  L     FK+   +L ++     +   S+   ++K                  Y
Sbjct: 132 YYMLIDKLGAAGEFKTTDALLMQMKQEGIVFRESLFILIMK-----------------HY 174

Query: 141 ANLKMTQDGLQVFDQMR-VHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
               +     ++   MR V++  P   +  V+L+ L       +V  V+ +M+  G+   
Sbjct: 175 GRAGLPGQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPT 234

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
           ++ + V++ A C  ++VD    LL +M       +   Y TLI    K G   E L + +
Sbjct: 235 VYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLE 294

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRAN 317
            M   G  PD+ T+N  IHG C+  R+ EA +L     ++G TPN  TY  L+ G CR  
Sbjct: 295 EMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMG 354

Query: 318 DLEEALRL--------------------------------REVMAAKGVYPGVVTYNSIL 345
            ++EA  L                                 E M + G  P + TYN+++
Sbjct: 355 KVDEARMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLI 414

Query: 346 RKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLM 405
             LCK+G +  A  L+NEM  K   P+ +T   LI+ +CK G    A  V + M   GL 
Sbjct: 415 LGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLA 474

Query: 406 LDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKL 465
           L+   Y  LI   CK +++  A  +   M   G  P   +++ L+ G C  N  E  L L
Sbjct: 475 LNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGL 534

Query: 466 LDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWR 525
             + +  G+  +   Y  LI  F ++  +  A +L N M   G   D + Y  L  A  R
Sbjct: 535 YQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCR 594

Query: 526 AGEPKACSDILDDMYRRRL 544
           AG  +    + +DM  + L
Sbjct: 595 AGNIEKGLALFEDMMSKGL 613


>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 132/453 (29%), Positives = 215/453 (47%), Gaps = 22/453 (4%)

Query: 72  PNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSH 131
           PN   SL +H   I   + N HF SA      +  +    +P   N  +          H
Sbjct: 17  PNLSSSLFTHSPTIP--SSNPHFSSA------VHHKSLNVSPQNFNTPISFQQQLSMFLH 68

Query: 132 VLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKM 191
                     N+  TQ   Q F  M   N  P L + T LL+ LAK +    V+ +Y +M
Sbjct: 69  NCKT-----GNITATQ-AFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQM 122

Query: 192 VQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMH 251
              G+  +    N+L++  C  + V +   ++  +  +    D+ TY TLI   C +   
Sbjct: 123 RLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRI 182

Query: 252 YEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGAT--------PNH 303
            +A  +  RM++ G +P+ +TY +L+ G CR G +  A +L +++   +        P  
Sbjct: 183 SKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVV 242

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
           ++Y+ +ID  C+    +EA  L E M  +G+ P V++Y S++   C  G+  +A RL NE
Sbjct: 243 ISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNE 302

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
           M  + + P+ VT N LI+  CK G    A  +   M++ G++ +  TY +LI GFC   +
Sbjct: 303 MVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGD 362

Query: 424 MDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRA 483
           ++ A+EL   M   G  P    Y+ L++GYC  +  E  +KL +  +  G   DV  Y A
Sbjct: 363 LNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGA 422

Query: 484 LIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIY 516
           L+    +  KV  A++LF +M+  GI GD  IY
Sbjct: 423 LLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIY 455



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 127/457 (27%), Positives = 206/457 (45%), Gaps = 49/457 (10%)

Query: 142 NLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIH 201
           N+    +GL V   +     +P +   T L+  L  +        ++ +M +LG   N  
Sbjct: 143 NVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAI 202

Query: 202 LYNVLIHACCKSSDVDKVEKLLCEM---------EFKDVRADLFTYNTLIALYCKKGMHY 252
            Y  L+   C++ ++    KL  EM          FK V   + +Y+ +I   CK     
Sbjct: 203 TYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPV---VISYSIIIDALCKDRRED 259

Query: 253 EALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLI 310
           EA  + + M+ +G++P +++Y SLIHGFC  G+  EA+RLF ++  +G  PN VT+  LI
Sbjct: 260 EARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLI 319

Query: 311 DGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIA 370
           D  C+   + EA  L EVM  +G+ P ++TYNS++   C  G +  A  L   M  K   
Sbjct: 320 DVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCE 379

Query: 371 PDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL 430
           PD +    LIN YCK      AMK+ N ML+ G   D  TY AL+ G  +  ++  AK+L
Sbjct: 380 PDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKL 439

Query: 431 --------------LFGMLDAGFSPSYC---------------------SYSWLVDGYCN 455
                         ++G+   G   + C                      ++ L+DG C 
Sbjct: 440 FGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCK 499

Query: 456 KNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVI 515
               E   +L ++     L  DV  Y  +I  FC+  +V  A  LF  M+ NG   D + 
Sbjct: 500 AGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKIT 559

Query: 516 YTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYR 552
           Y +L   ++ + + +   ++L  M +R + + + I R
Sbjct: 560 YATLIRGFFESKKLEKVVELLHMMVQRDVSLDVNILR 596



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 61/275 (22%), Positives = 113/275 (41%), Gaps = 10/275 (3%)

Query: 314 CRANDLE--EALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAP 371
           C+  ++   +A +   +M      P + ++  +L  L K         L N+M    I+P
Sbjct: 70  CKTGNITATQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISP 129

Query: 372 DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
           D  T N L+N  C +      + V   +L  G + D  TY  LI G C    +  A  L 
Sbjct: 130 DCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLF 189

Query: 432 FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSV------YRALI 485
             M   G +P+  +Y  L+ G C   N    LKL  E ++      ++       Y  +I
Sbjct: 190 TRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIII 249

Query: 486 RRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
              CK  + D A+ LF  M+  G+    + YTSL + +   G+ +    + ++M  + + 
Sbjct: 250 DALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQ 309

Query: 546 ITLKIYRSFSASYAKDNEILDL--FWSHVVDRGLM 578
             +  +        K+ ++++       ++ RG++
Sbjct: 310 PNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIV 344


>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
 gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
          Length = 500

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 112/336 (33%), Positives = 180/336 (53%), Gaps = 4/336 (1%)

Query: 169 TVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEF 228
           T L+  L K +  +       KMV  G   +++ Y  +IHA C  + + +  K L EM  
Sbjct: 15  TSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMAN 74

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
           +++  ++ TY  LI   CK G   EA+A+  +M ++ + P  VTYNSLI G C+  R  E
Sbjct: 75  RNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKAERASE 133

Query: 289 ARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILR 346
           A  L  ++   G  P+  TYTTLI G+C++   ++ALR+ E + A+G  P VVTY+ ++ 
Sbjct: 134 AYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLID 193

Query: 347 KLCKEGRIRDANRLLNEM-NEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLM 405
            LCKEGR+++A  L   M       P+ VT N+LI+ +C++G    AM +  RM E G  
Sbjct: 194 GLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSS 253

Query: 406 LDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKL 465
            D  TY  L++GFCK   +D A +LL  M   G +P   +++ L+DG C +N     + +
Sbjct: 254 PDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHI 313

Query: 466 LDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
           L E   +     V  Y  ++  +C+  +++ A++  
Sbjct: 314 LGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM 349



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 135/478 (28%), Positives = 219/478 (45%), Gaps = 59/478 (12%)

Query: 54  CHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTP 113
           C +  L  A     +     +   + ++  +IH L        A+  LE++A R+   TP
Sbjct: 22  CKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMANRNL--TP 79

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           +V+   V I     G                   + + +  +MR    +P       L++
Sbjct: 80  NVVTYTVLIDGLCKGGR---------------VDEAVALLSKMR-KKCVPTAVTYNSLIS 123

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
            L K       + + ++MV  G + +I  Y  LI   CKS   D   ++  ++  +  R 
Sbjct: 124 GLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRP 183

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREG-ISPDIVTYNSLIHGFCREGRMREARRL 292
           D+ TY+ LI   CK+G   EA+ +  RM + G   P+ VTYNSLI GFCR G+M EA  L
Sbjct: 184 DVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNL 243

Query: 293 FRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
              +   G++P+ VTYTTL++G+C+   L++A  L   M  KG+ P VVT+ S++  LC+
Sbjct: 244 LERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCR 303

Query: 351 EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
           E R+ DA  +L EM  K  +P   T NT+++ YC+      A K    MLE         
Sbjct: 304 ENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKF---MLE--------- 351

Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFV 470
                       EMD               P+  S++ ++ G C  N     ++L++E  
Sbjct: 352 ------------EMDCP-------------PNVVSFNIMIRGLCKVNRSSEAMELVEEAR 386

Query: 471 SRGLCVDVSVYRALIRRFCKKEKVDYAQRLF-NLMQGNGILGDSVIYTSLAYAYWRAG 527
            R    DV +Y  +I   C+++KVD A R++  +++  G L +S+ Y++L      AG
Sbjct: 387 RRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGLCNAG 444



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 109/347 (31%), Positives = 182/347 (52%), Gaps = 10/347 (2%)

Query: 134 SWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQ 193
           + L+  +   K + D L+VF+Q+      P +   + L++ L K+        ++ +M++
Sbjct: 154 TTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIK 213

Query: 194 LG-VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHY 252
            G  + N   YN LI   C+   +D+   LL  M       D+ TY TL+  +CK     
Sbjct: 214 SGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLD 273

Query: 253 EALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLI 310
           +A  + ++M R+G++PD+VT+ SL+ G CRE R+ +A  +  ++  K  +P   TY T++
Sbjct: 274 DAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTIL 333

Query: 311 DGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIA 370
           DGYCRAN LEEA +   ++      P VV++N ++R LCK  R  +A  L+ E   ++  
Sbjct: 334 DGYCRANQLEEARKF--MLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCN 391

Query: 371 PDNVTCNTLINAYCKIGDTASAMKVKNRMLE-AGLMLDQFTYKALIHGFCKAKEMDIAKE 429
           PD V   T+I+  C+      A +V  +MLE  G + +  TY  L+ G C A  +D A+ 
Sbjct: 392 PDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGLCNAGMLDRAR- 450

Query: 430 LLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCV 476
              G ++ G  P+  +Y+ L+D +   N +E   +LLD+ V RG  V
Sbjct: 451 ---GYIEKGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRGFGV 494



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 115/335 (34%), Positives = 165/335 (49%), Gaps = 4/335 (1%)

Query: 233 ADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRL 292
           AD  TY +LI   CK     +AL    +M  +G  PD+ TY ++IH  C E R+ EAR+ 
Sbjct: 9   ADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKF 68

Query: 293 FRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
             ++  +  TPN VTYT LIDG C+   ++EA+ L   M  K V P  VTYNS++  LCK
Sbjct: 69  LEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCK 127

Query: 351 EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
             R  +A  LL EM      PD  T  TLI  +CK   +  A++V  +++  G   D  T
Sbjct: 128 AERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVT 187

Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFS-PSYCSYSWLVDGYCNKNNEEALLKLLDEF 469
           Y  LI G CK   +  A +L   M+ +G   P+  +Y+ L+ G+C     +  + LL+  
Sbjct: 188 YSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERM 247

Query: 470 VSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEP 529
              G   DV  Y  L+  FCK  ++D A  L N M   G+  D V +TSL     R    
Sbjct: 248 AETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRL 307

Query: 530 KACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
                IL +M R+    T+  Y +    Y + N++
Sbjct: 308 SDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQL 342



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 102/333 (30%), Positives = 164/333 (49%), Gaps = 2/333 (0%)

Query: 198 ANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAV 257
           A+   Y  LI   CK   +++    L +M  K    D++TY  +I   C +   +EA   
Sbjct: 9   ADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKF 68

Query: 258 QDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI-KGATPNHVTYTTLIDGYCRA 316
            + M    ++P++VTY  LI G C+ GR+ EA  L   + K   P  VTY +LI G C+A
Sbjct: 69  LEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTAVTYNSLISGLCKA 128

Query: 317 NDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTC 376
               EA  L E M   G  P + TY +++   CK  +  DA R+  ++  +   PD VT 
Sbjct: 129 ERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTY 188

Query: 377 NTLINAYCKIGDTASAMKVKNRMLEAG-LMLDQFTYKALIHGFCKAKEMDIAKELLFGML 435
           + LI+  CK G    A+ +  RM+++G  M +  TY +LI GFC+  +MD A  LL  M 
Sbjct: 189 SCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMA 248

Query: 436 DAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVD 495
           + G SP   +Y+ L++G+C     +    LL++   +GL  DV  + +L+   C++ ++ 
Sbjct: 249 ETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLS 308

Query: 496 YAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
            A  +   M+          Y ++   Y RA +
Sbjct: 309 DAVHILGEMRRKSCSPTVYTYNTILDGYCRANQ 341



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 108/327 (33%), Positives = 161/327 (49%), Gaps = 16/327 (4%)

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
           S D VTY SLI G C+  R+ +A      +  KG  P+  TYT +I   C  N L EA +
Sbjct: 8   SADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARK 67

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
             E MA + + P VVTY  ++  LCK GR+ +A  LL++M  KK  P  VT N+LI+  C
Sbjct: 68  FLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKM-RKKCVPTAVTYNSLISGLC 126

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           K    + A  +   M+ +G + D FTY  LI GFCK+K+ D A  +   ++  GF P   
Sbjct: 127 KAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVV 186

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSV-YRALIRRFCKKEKVDYAQRLFNL 503
           +YS L+DG C +   +  + L    +  G C+  +V Y +LI  FC+  K+D A  L   
Sbjct: 187 TYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLER 246

Query: 504 MQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNE 563
           M   G   D V YT+L   + +        D+L+ M R+ L   +  + S      ++N 
Sbjct: 247 MAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENR 306

Query: 564 ILDLFWSHVVDRGLMSKHIFKEMQLRN 590
           + D            + HI  EM+ ++
Sbjct: 307 LSD------------AVHILGEMRRKS 321



 Score =  108 bits (271), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 71/283 (25%), Positives = 134/283 (47%), Gaps = 9/283 (3%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N+   + L+  +  +    + + + ++M      P +   T L+N   K    D  + + 
Sbjct: 220 NTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLL 279

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
            +M + G+  ++  +  L+   C+ + +     +L EM  K     ++TYNT++  YC+ 
Sbjct: 280 NQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRA 339

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTY 306
               EA      +E     P++V++N +I G C+  R  EA  L  +   +   P+ V Y
Sbjct: 340 NQLEEARKFM--LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMY 397

Query: 307 TTLIDGYCRANDLEEALRL-REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMN 365
           TT+IDG CR   ++EA R+ R+++   G  P  +TY++++  LC  G +  A   +    
Sbjct: 398 TTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGLCNAGMLDRARGYI---- 453

Query: 366 EKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ 408
           EK   P+  T N LI+A+ K      A ++ + M++ G  + Q
Sbjct: 454 EKGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRGFGVVQ 496


>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
 gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
          Length = 500

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 112/336 (33%), Positives = 180/336 (53%), Gaps = 4/336 (1%)

Query: 169 TVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEF 228
           T L+  L K +  +       KMV  G   +++ Y  +IHA C  + + +  K L EM  
Sbjct: 15  TSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMAN 74

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
           +++  ++ TY  LI   CK G   EA+A+  +M ++ + P  VTYNSLI G C+  R  E
Sbjct: 75  RNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKAERASE 133

Query: 289 ARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILR 346
           A  L  ++   G  P+  TYTTLI G+C++   ++ALR+ E + A+G  P VVTY+ ++ 
Sbjct: 134 AYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLID 193

Query: 347 KLCKEGRIRDANRLLNEM-NEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLM 405
            LCKEGR+++A  L   M       P+ VT N+LI+ +C++G    AM +  RM E G  
Sbjct: 194 GLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSS 253

Query: 406 LDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKL 465
            D  TY  L++GFCK   +D A +LL  M   G +P   +++ L+DG C +N     + +
Sbjct: 254 PDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHI 313

Query: 466 LDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
           L E   +     V  Y  ++  +C+  +++ A++  
Sbjct: 314 LGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM 349



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 109/345 (31%), Positives = 181/345 (52%), Gaps = 10/345 (2%)

Query: 134 SWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQ 193
           + L+  +   K + D L+VF+Q+      P +   + L++ L K+        ++ +M++
Sbjct: 154 TTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIK 213

Query: 194 LG-VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHY 252
            G  + N   YN LI   C+   +D+   LL  M       D+ TY TL+  +CK     
Sbjct: 214 SGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLD 273

Query: 253 EALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLI 310
           +A  + ++M R+G++PD+VT+ SL+ G CRE R+ +A  +  ++  K  +P   TY T++
Sbjct: 274 DAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTIL 333

Query: 311 DGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIA 370
           DGYCRAN LEEA +   ++      P VV++N ++R LCK  R  +A  L+ E   ++  
Sbjct: 334 DGYCRANQLEEARKF--MLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCN 391

Query: 371 PDNVTCNTLINAYCKIGDTASAMKVKNRMLE-AGLMLDQFTYKALIHGFCKAKEMDIAKE 429
           PD V   T+I+  C+      A +V  +MLE  G + +  TY  LI G C A  +D A+ 
Sbjct: 392 PDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLITGLCNAGMLDRAR- 450

Query: 430 LLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGL 474
              G ++ G  P+  +Y+ L+D +   N +E   +LLD+ V RG 
Sbjct: 451 ---GYIEKGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRGF 492



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 135/478 (28%), Positives = 219/478 (45%), Gaps = 59/478 (12%)

Query: 54  CHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTP 113
           C +  L  A     +     +   + ++  +IH L        A+  LE++A R+   TP
Sbjct: 22  CKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMANRNL--TP 79

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           +V+   V I     G                   + + +  +MR    +P       L++
Sbjct: 80  NVVTYTVLIDGLCKGGR---------------VDEAVALLSKMR-KKCVPTAVTYNSLIS 123

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
            L K       + + ++MV  G + +I  Y  LI   CKS   D   ++  ++  +  R 
Sbjct: 124 GLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRP 183

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREG-ISPDIVTYNSLIHGFCREGRMREARRL 292
           D+ TY+ LI   CK+G   EA+ +  RM + G   P+ VTYNSLI GFCR G+M EA  L
Sbjct: 184 DVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNL 243

Query: 293 FRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
              +   G++P+ VTYTTL++G+C+   L++A  L   M  KG+ P VVT+ S++  LC+
Sbjct: 244 LERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCR 303

Query: 351 EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
           E R+ DA  +L EM  K  +P   T NT+++ YC+      A K    MLE         
Sbjct: 304 ENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKF---MLE--------- 351

Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFV 470
                       EMD               P+  S++ ++ G C  N     ++L++E  
Sbjct: 352 ------------EMDCP-------------PNVVSFNIMIRGLCKVNRSSEAMELVEEAR 386

Query: 471 SRGLCVDVSVYRALIRRFCKKEKVDYAQRLF-NLMQGNGILGDSVIYTSLAYAYWRAG 527
            R    DV +Y  +I   C+++KVD A R++  +++  G L +S+ Y++L      AG
Sbjct: 387 RRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLITGLCNAG 444



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 115/335 (34%), Positives = 165/335 (49%), Gaps = 4/335 (1%)

Query: 233 ADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRL 292
           AD  TY +LI   CK     +AL    +M  +G  PD+ TY ++IH  C E R+ EAR+ 
Sbjct: 9   ADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKF 68

Query: 293 FRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
             ++  +  TPN VTYT LIDG C+   ++EA+ L   M  K V P  VTYNS++  LCK
Sbjct: 69  LEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCK 127

Query: 351 EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
             R  +A  LL EM      PD  T  TLI  +CK   +  A++V  +++  G   D  T
Sbjct: 128 AERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVT 187

Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFS-PSYCSYSWLVDGYCNKNNEEALLKLLDEF 469
           Y  LI G CK   +  A +L   M+ +G   P+  +Y+ L+ G+C     +  + LL+  
Sbjct: 188 YSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERM 247

Query: 470 VSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEP 529
              G   DV  Y  L+  FCK  ++D A  L N M   G+  D V +TSL     R    
Sbjct: 248 AETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRL 307

Query: 530 KACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
                IL +M R+    T+  Y +    Y + N++
Sbjct: 308 SDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQL 342



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 102/333 (30%), Positives = 164/333 (49%), Gaps = 2/333 (0%)

Query: 198 ANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAV 257
           A+   Y  LI   CK   +++    L +M  K    D++TY  +I   C +   +EA   
Sbjct: 9   ADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKF 68

Query: 258 QDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI-KGATPNHVTYTTLIDGYCRA 316
            + M    ++P++VTY  LI G C+ GR+ EA  L   + K   P  VTY +LI G C+A
Sbjct: 69  LEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTAVTYNSLISGLCKA 128

Query: 317 NDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTC 376
               EA  L E M   G  P + TY +++   CK  +  DA R+  ++  +   PD VT 
Sbjct: 129 ERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTY 188

Query: 377 NTLINAYCKIGDTASAMKVKNRMLEAG-LMLDQFTYKALIHGFCKAKEMDIAKELLFGML 435
           + LI+  CK G    A+ +  RM+++G  M +  TY +LI GFC+  +MD A  LL  M 
Sbjct: 189 SCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMA 248

Query: 436 DAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVD 495
           + G SP   +Y+ L++G+C     +    LL++   +GL  DV  + +L+   C++ ++ 
Sbjct: 249 ETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLS 308

Query: 496 YAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
            A  +   M+          Y ++   Y RA +
Sbjct: 309 DAVHILGEMRRKSCSPTVYTYNTILDGYCRANQ 341



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 108/327 (33%), Positives = 161/327 (49%), Gaps = 16/327 (4%)

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
           S D VTY SLI G C+  R+ +A      +  KG  P+  TYT +I   C  N L EA +
Sbjct: 8   SADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARK 67

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
             E MA + + P VVTY  ++  LCK GR+ +A  LL++M  KK  P  VT N+LI+  C
Sbjct: 68  FLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKM-RKKCVPTAVTYNSLISGLC 126

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           K    + A  +   M+ +G + D FTY  LI GFCK+K+ D A  +   ++  GF P   
Sbjct: 127 KAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVV 186

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSV-YRALIRRFCKKEKVDYAQRLFNL 503
           +YS L+DG C +   +  + L    +  G C+  +V Y +LI  FC+  K+D A  L   
Sbjct: 187 TYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLER 246

Query: 504 MQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNE 563
           M   G   D V YT+L   + +        D+L+ M R+ L   +  + S      ++N 
Sbjct: 247 MAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENR 306

Query: 564 ILDLFWSHVVDRGLMSKHIFKEMQLRN 590
           + D            + HI  EM+ ++
Sbjct: 307 LSD------------AVHILGEMRRKS 321



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 70/279 (25%), Positives = 132/279 (47%), Gaps = 9/279 (3%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N+   + L+  +  +    + + + ++M      P +   T L+N   K    D  + + 
Sbjct: 220 NTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLL 279

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
            +M + G+  ++  +  L+   C+ + +     +L EM  K     ++TYNT++  YC+ 
Sbjct: 280 NQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRA 339

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTY 306
               EA      +E     P++V++N +I G C+  R  EA  L  +   +   P+ V Y
Sbjct: 340 NQLEEARKFM--LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMY 397

Query: 307 TTLIDGYCRANDLEEALRL-REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMN 365
           TT+IDG CR   ++EA R+ R+++   G  P  +TY++++  LC  G +  A   +    
Sbjct: 398 TTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLITGLCNAGMLDRARGYI---- 453

Query: 366 EKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGL 404
           EK   P+  T N LI+A+ K      A ++ + M++ G 
Sbjct: 454 EKGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRGF 492


>gi|356577604|ref|XP_003556914.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g32630-like [Glycine max]
          Length = 619

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 115/371 (30%), Positives = 199/371 (53%), Gaps = 2/371 (0%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           ++ ++M    ++P +     LLN+    +  + V ++   M + GVVA++  Y +LI   
Sbjct: 203 ELMNEMAARGVVPTVFTYNTLLNACVVRKDREGVDEILGLMEREGVVASLVTYTILIEWY 262

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
             S  + + EK+  EM  ++V  D++ Y ++I+  C+ G    A A+ D M   GI P+ 
Sbjct: 263 ASSERIGEAEKVYEEMCERNVEMDVYVYTSMISWNCRAGNVRRASALFDEMICRGIVPNT 322

Query: 271 VTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
            T+ +LI G C+ G+M  A  L  ++  KG   N V + T++DGYC+   ++EA RL+++
Sbjct: 323 XTFGALISGVCKAGQMEAAEILLEEMQCKGVDLNVVIFNTMMDGYCKRGMMDEAFRLQDI 382

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M  KG    V TYN +   LCK  R  +A R+LN M EK +AP+ VTC T I  YC+ G+
Sbjct: 383 MERKGFEADVFTYNILASGLCKLHRYEEAKRVLNVMVEKGVAPNVVTCATFIEIYCQEGN 442

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
            A   +    + + G++ +  TY  LI  + K +++  A  L   M++ G  P   +Y+ 
Sbjct: 443 LAEPERFLRNIEKRGVVPNIVTYNTLIDAYSKNEKVKQAHXLKAEMVEKGLLPDVFTYTS 502

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG 508
           L+ G C  +  +  LKL +E + +G+  +V  Y A+I    K+ + D A +L++ M   G
Sbjct: 503 LIHGECIVDKVDEALKLFNEMLVKGIRGNVKTYTAIISGLSKEGRADEALKLYDEMMRMG 562

Query: 509 ILGDSVIYTSL 519
           ++ D  ++ +L
Sbjct: 563 LIPDDRVFEAL 573



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 155/582 (26%), Positives = 259/582 (44%), Gaps = 50/582 (8%)

Query: 18  SAIMLKGHWAKLLN-PNIASSLTSTAIHKVLLNLYNCCHIPSLSC-AFFKWAESAVPNYK 75
           S+ ++K    +L N P++   L S   ++VL +      +P LSC  FF +  S      
Sbjct: 9   SSCLVKKTIGRLENSPSLQFDLISHVTYRVLSDP----TLPPLSCLTFFHFLPSP----- 59

Query: 76  HSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSW 135
             L +   +++ L   + F + + +L+ +   + + T   ++ +V + D+ +   H +  
Sbjct: 60  -DLNARLILLYRLFAARKFAAMRTLLDSLVTTE-VETKRPVSDVVSLVDECEFEPHFVET 117

Query: 136 L--VIFY--ANLKMTQDGLQVFDQMRVHNLMPHLHAC----------------------- 168
           L  ++F   A+ +M +D L+VFD +    L+    +C                       
Sbjct: 118 LCDMLFRVCADNRMFRDALKVFDYVMEKGLVVEGRSCFXKKCNKVELCVRFFRRMVESGR 177

Query: 169 --------TVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVE 220
                   T++++ L +        ++  +M   GVV  +  YN L++AC    D + V+
Sbjct: 178 VDIGVQSLTIVVDVLCRRGEVGRAKELMNEMAARGVVPTVFTYNTLLNACVVRKDREGVD 237

Query: 221 KLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGF 280
           ++L  ME + V A L TY  LI  Y       EA  V + M    +  D+  Y S+I   
Sbjct: 238 EILGLMEREGVVASLVTYTILIEWYASSERIGEAEKVYEEMCERNVEMDVYVYTSMISWN 297

Query: 281 CREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGV 338
           CR G +R A  LF ++  +G  PN  T+  LI G C+A  +E A  L E M  KGV   V
Sbjct: 298 CRAGNVRRASALFDEMICRGIVPNTXTFGALISGVCKAGQMEAAEILLEEMQCKGVDLNV 357

Query: 339 VTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNR 398
           V +N+++   CK G + +A RL + M  K    D  T N L +  CK+     A +V N 
Sbjct: 358 VIFNTMMDGYCKRGMMDEAFRLQDIMERKGFEADVFTYNILASGLCKLHRYEEAKRVLNV 417

Query: 399 MLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNN 458
           M+E G+  +  T    I  +C+   +   +  L  +   G  P+  +Y+ L+D Y     
Sbjct: 418 MVEKGVAPNVVTCATFIEIYCQEGNLAEPERFLRNIEKRGVVPNIVTYNTLIDAYSKNEK 477

Query: 459 EEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTS 518
            +    L  E V +GL  DV  Y +LI   C  +KVD A +LFN M   GI G+   YT+
Sbjct: 478 VKQAHXLKAEMVEKGLLPDVFTYTSLIHGECIVDKVDEALKLFNEMLVKGIRGNVKTYTA 537

Query: 519 LAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAK 560
           +     + G       + D+M R  L+   +++ +   S  K
Sbjct: 538 IISGLSKEGRADEALKLYDEMMRMGLIPDDRVFEALVGSLHK 579



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 124/432 (28%), Positives = 209/432 (48%), Gaps = 24/432 (5%)

Query: 54  CHIPSLSCAFFK-WAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLST 112
           C+   L   FF+   ES   +    +QS   ++ +L +      A+ ++ ++A R  + T
Sbjct: 159 CNKVELCVRFFRRMVESGRVDI--GVQSLTIVVDVLCRRGEVGRAKELMNEMAARGVVPT 216

Query: 113 PSVLNALVK---IHDDPDGNSHVL---------------SWLVIFYANLKMTQDGLQVFD 154
               N L+    +  D +G   +L               + L+ +YA+ +   +  +V++
Sbjct: 217 VFTYNTLLNACVVRKDREGVDEILGLMEREGVVASLVTYTILIEWYASSERIGEAEKVYE 276

Query: 155 QMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSS 214
           +M   N+   ++  T +++   +         ++ +M+  G+V N   +  LI   CK+ 
Sbjct: 277 EMCERNVEMDVYVYTSMISWNCRAGNVRRASALFDEMICRGIVPNTXTFGALISGVCKAG 336

Query: 215 DVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYN 274
            ++  E LL EM+ K V  ++  +NT++  YCK+GM  EA  +QD MER+G   D+ TYN
Sbjct: 337 QMEAAEILLEEMQCKGVDLNVVIFNTMMDGYCKRGMMDEAFRLQDIMERKGFEADVFTYN 396

Query: 275 SLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAK 332
            L  G C+  R  EA+R+   +  KG  PN VT  T I+ YC+  +L E  R    +  +
Sbjct: 397 ILASGLCKLHRYEEAKRVLNVMVEKGVAPNVVTCATFIEIYCQEGNLAEPERFLRNIEKR 456

Query: 333 GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
           GV P +VTYN+++    K  +++ A+ L  EM EK + PD  T  +LI+  C +     A
Sbjct: 457 GVVPNIVTYNTLIDAYSKNEKVKQAHXLKAEMVEKGLLPDVFTYTSLIHGECIVDKVDEA 516

Query: 393 MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
           +K+ N ML  G+  +  TY A+I G  K    D A +L   M+  G  P    +  LV G
Sbjct: 517 LKLFNEMLVKGIRGNVKTYTAIISGLSKEGRADEALKLYDEMMRMGLIPDDRVFEALV-G 575

Query: 453 YCNKNNEEALLK 464
             +K +  A LK
Sbjct: 576 SLHKPSSHAALK 587


>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
 gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
 gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 577

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 129/456 (28%), Positives = 219/456 (48%), Gaps = 37/456 (8%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D + +F  M     +P +     LL+++AK +  D+V  + +KM +LG+  N++ YN+LI
Sbjct: 68  DAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILI 127

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           +  C+ S +     LL +M        + T ++L+  YC      +A+A+ D+M   G  
Sbjct: 128 NCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYR 187

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLE----- 320
           PD +T+ +LIHG     +  EA  L   +  +G  PN VTY  +++G C+  D++     
Sbjct: 188 PDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNL 247

Query: 321 ------------------------------EALRLREVMAAKGVYPGVVTYNSILRKLCK 350
                                         +AL L   M  KGV P V+TY+S++  LC 
Sbjct: 248 LNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCN 307

Query: 351 EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
             R  DA+RLL++M E+KI P+ VT N LI+A+ K G    A K+ + M++  +  D FT
Sbjct: 308 YERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 367

Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFV 470
           Y +LI+GFC    +D AK +   M+     P+  +Y+ L++G+C     +  ++L  E  
Sbjct: 368 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMS 427

Query: 471 SRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPK 530
            RGL  +   Y  LI  F +    D AQ +F  M  +G+  + + Y +L     + G+ +
Sbjct: 428 QRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLE 487

Query: 531 ACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
               + + + R ++  T+  Y        K  ++ D
Sbjct: 488 KAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVED 523



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 121/416 (29%), Positives = 203/416 (48%), Gaps = 4/416 (0%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           ++L  ++K+  +P  +   LS L+  Y + K   D + + DQM      P     T L++
Sbjct: 141 ALLGKMMKLGYEP--SIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIH 198

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
            L           +  +MVQ G   N+  Y V+++  CK  D+D    LL +ME   + A
Sbjct: 199 GLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEA 258

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           ++  Y+T+I   CK     +AL +   ME +G+ P+++TY+SLI   C   R  +A RL 
Sbjct: 259 NVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLL 318

Query: 294 RDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
            D+  +   PN VT+  LID + +   L EA +L + M  + + P + TY+S++   C  
Sbjct: 319 SDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 378

Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
            R+ +A  +   M  K   P+ VT NTLIN +CK       +++   M + GL+ +  TY
Sbjct: 379 DRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTY 438

Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
             LIHGF +A++ D A+ +   M+  G  P+  +Y+ L+DG C     E  + + +    
Sbjct: 439 TTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR 498

Query: 472 RGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
             +   +  Y  +I   CK  KV+    LF  +   G+  D +IY ++   + R G
Sbjct: 499 SKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKG 554



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 110/369 (29%), Positives = 195/369 (52%), Gaps = 2/369 (0%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
            + + + D+M      P+L    V++N L K    D+ + +  KM    + AN+ +Y+ +
Sbjct: 207 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTV 266

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           I + CK    D    L  EME K VR ++ TY++LI+  C      +A  +   M    I
Sbjct: 267 IDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKI 326

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
           +P++VT+N+LI  F +EG++ EA +L+ ++  +   P+  TY++LI+G+C  + L+EA  
Sbjct: 327 NPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 386

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           + E+M +K  +P VVTYN+++   CK  RI +   L  EM+++ +  + VT  TLI+ + 
Sbjct: 387 MFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFF 446

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           +  D  +A  V  +M+  G+  +  TY  L+ G CK  +++ A  +   +  +   P+  
Sbjct: 447 QARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIY 506

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
           +Y+ +++G C     E    L      +G+  DV +Y  +I  FC+K   + A  LF  M
Sbjct: 507 TYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKM 566

Query: 505 QGNGILGDS 513
           + +G L DS
Sbjct: 567 REDGPLPDS 575



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 105/420 (25%), Positives = 186/420 (44%), Gaps = 59/420 (14%)

Query: 47  LLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIAL 106
           LLN Y  CH   +S A     +     Y+    +  T+IH L  +     A  +++++  
Sbjct: 161 LLNGY--CHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ 218

Query: 107 R----DFLSTPSVLNALVKIHD--------------DPDGNSHVLSWLVIFYANLKMTQD 148
           R    + ++   V+N L K  D                + N  + S ++      +   D
Sbjct: 219 RGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDD 278

Query: 149 GLQVFDQMRVHNLMPHLHACTVLLNSLAK-DRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
            L +F +M    + P++   + L++ L   +R +D   ++   M++  +  N+  +N LI
Sbjct: 279 ALNLFTEMENKGVRPNVITYSSLISCLCNYERWSD-ASRLLSDMIERKINPNVVTFNALI 337

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
            A  K   + + EKL  EM  + +  D+FTY++LI  +C      EA  + + M  +   
Sbjct: 338 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 397

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDIK------------------------------ 297
           P++VTYN+LI+GFC+  R+ E   LFR++                               
Sbjct: 398 PNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 457

Query: 298 -------GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
                  G  PN +TY TL+DG C+   LE+A+ + E +    + P + TYN ++  +CK
Sbjct: 458 FKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 517

Query: 351 EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
            G++ D   L   ++ K + PD +  NT+I+ +C+ G    A  +  +M E G + D  T
Sbjct: 518 AGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 95/201 (47%)

Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT 378
           L++A+ L   M      P +  +N +L  + K  +      L  +M    I+ +  T N 
Sbjct: 66  LDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNI 125

Query: 379 LINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAG 438
           LIN +C+    + A+ +  +M++ G      T  +L++G+C  K +  A  L+  M++ G
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185

Query: 439 FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQ 498
           + P   +++ L+ G    N     + L+D  V RG   ++  Y  ++   CK+  +D A 
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAF 245

Query: 499 RLFNLMQGNGILGDSVIYTSL 519
            L N M+   I  + VIY+++
Sbjct: 246 NLLNKMEAAKIEANVVIYSTV 266



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 58/235 (24%), Positives = 102/235 (43%), Gaps = 3/235 (1%)

Query: 337 GVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVK 396
           G   Y  ILR      ++ DA  L   M + +  P     N L++A  K+      + + 
Sbjct: 49  GSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLG 108

Query: 397 NRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNK 456
            +M   G+  + +TY  LI+ FC+  ++ +A  LL  M+  G+ PS  + S L++GYC+ 
Sbjct: 109 EKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHG 168

Query: 457 NNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIY 516
                 + L+D+ V  G   D   +  LI       K   A  L + M   G   + V Y
Sbjct: 169 KRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTY 228

Query: 517 TSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSAS---YAKDNEILDLF 568
             +     + G+     ++L+ M   ++   + IY +   S   Y  +++ L+LF
Sbjct: 229 GVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLF 283


>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
 gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
          Length = 841

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 112/361 (31%), Positives = 191/361 (52%), Gaps = 6/361 (1%)

Query: 190 KMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKG 249
           K+VQ  VV    +YN +I   CK   V+    L  E   K +  D+FTYN LI+ +C  G
Sbjct: 327 KLVQPDVV----MYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVG 382

Query: 250 MHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYT 307
              +A+ + ++M  + I PD+ T++ L+ GFC++G ++EA+ +   +  +   P+ VTY+
Sbjct: 383 KLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYS 442

Query: 308 TLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEK 367
           +L+DGYC  N++ +A  +   M+ +GV   V +YN ++   CK   + +A +L  EM+ K
Sbjct: 443 SLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHK 502

Query: 368 KIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIA 427
           +I PD +T ++LI+  CK G  + A+++ + M   G   D  TY +++   CK   +D A
Sbjct: 503 QIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKA 562

Query: 428 KELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRR 487
             LL  +   G  P   +Y+ LV G C     E   K+ ++ + +G  +DV  Y  +I+ 
Sbjct: 563 ITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQG 622

Query: 488 FCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMIT 547
           FC K   D A  L + M+ NG + D+  Y  +  + +   E      +L +M  R L++ 
Sbjct: 623 FCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMRGLLVA 682

Query: 548 L 548
           L
Sbjct: 683 L 683



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 102/371 (27%), Positives = 197/371 (53%), Gaps = 5/371 (1%)

Query: 161 LMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVE 220
           + P +     +++ + KD+  +  + +Y + V   +  ++  YN LI   C    +    
Sbjct: 329 VQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAI 388

Query: 221 KLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGF 280
            L  +M  K++  D++T++ L+  +CK G   EA  V   M ++ I PD+VTY+SL+ G+
Sbjct: 389 DLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGY 448

Query: 281 CREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGV 338
           C    + +A  +F  +  +G T N  +Y  +I+G+C+   ++EA++L + M  K ++P V
Sbjct: 449 CLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDV 508

Query: 339 VTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNR 398
           +TY+S++  LCK GRI  A  L++EM+ +   PD +T N++++A CK      A+ +  +
Sbjct: 509 ITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTK 568

Query: 399 MLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNN 458
           +   G+  D  TY  L+ G C++ +++ A+++   +L  G++    +Y+ ++ G+C+K  
Sbjct: 569 LKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGL 628

Query: 459 EEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGI---LGDSVI 515
            +  L LL +    G   D   Y  +I    +K++ D A++L   M   G+   L D ++
Sbjct: 629 FDEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMRGLLVALTDDLV 688

Query: 516 YTSLAYAYWRA 526
            + L    W A
Sbjct: 689 ASILVRRTWCA 699



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 160/308 (51%), Gaps = 2/308 (0%)

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           D  +Y TLI   CK G    AL +  R + + + PD+V YN++I G C++  + +A  L+
Sbjct: 297 DQVSYGTLINGLCKVGETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLY 356

Query: 294 RD--IKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
            +   K   P+  TY  LI G+C    L++A+ L   M +K + P V T++ ++   CK+
Sbjct: 357 SEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKD 416

Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
           G I++A  +L  M ++ I PD VT ++L++ YC + +   A  + N M   G+  +  +Y
Sbjct: 417 GNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSY 476

Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
             +I+GFCK K +D A +L   M      P   +YS L+DG C        L+L+DE   
Sbjct: 477 NIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHY 536

Query: 472 RGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKA 531
           RG   D+  Y +++   CKK  VD A  L   ++G GI  D   YT L     ++G+ + 
Sbjct: 537 RGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLED 596

Query: 532 CSDILDDM 539
              + +D+
Sbjct: 597 ARKVFEDL 604



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 100/321 (31%), Positives = 157/321 (48%), Gaps = 13/321 (4%)

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRAN 317
           ++ + G  PD +T  + I GFC +G++ +A      +   G   + V+Y TLI+G C+  
Sbjct: 253 KILKNGYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVG 312

Query: 318 DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCN 377
           + + AL L      K V P VV YN+I+  +CK+  + DA  L +E   K+I PD  T N
Sbjct: 313 ETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYN 372

Query: 378 TLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA 437
            LI+ +C +G    A+ + N+M    ++ D +T+  L+ GFCK   +  AK +L  M+  
Sbjct: 373 ALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQ 432

Query: 438 GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYA 497
              P   +YS L+DGYC  N       + +    RG+  +V  Y  +I  FCK + VD A
Sbjct: 433 SIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEA 492

Query: 498 QRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSAS 557
            +LF  M    I  D + Y+SL     ++G      +++D+M+          YR     
Sbjct: 493 MKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMH----------YRGQQPD 542

Query: 558 YAKDNEILD-LFWSHVVDRGL 577
               N ILD L   H VD+ +
Sbjct: 543 IITYNSILDALCKKHHVDKAI 563



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 96/362 (26%), Positives = 167/362 (46%), Gaps = 56/362 (15%)

Query: 83  TMIHILTKNKHFKSAQNML-EKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYA 141
           T+I  + K+KH   A ++  EK++ R F                PD  ++  + L+  + 
Sbjct: 338 TIIDGMCKDKHVNDAFDLYSEKVSKRIF----------------PDVFTY--NALISGFC 379

Query: 142 NLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKD-------RLTDMVWK-------- 186
            +   +D + +F++M   N++P ++  ++L++   KD        +  M+ K        
Sbjct: 380 IVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVV 439

Query: 187 --------------------VYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEM 226
                               ++  M   GV AN+  YN++I+  CK   VD+  KL  EM
Sbjct: 440 TYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEM 499

Query: 227 EFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRM 286
             K +  D+ TY++LI   CK G    AL + D M   G  PDI+TYNS++   C++  +
Sbjct: 500 HHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHV 559

Query: 287 REARRLFRDIKGAT--PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSI 344
            +A  L   +KG    P+  TYT L+ G C++  LE+A ++ E +  KG    V  Y  +
Sbjct: 560 DKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVM 619

Query: 345 LRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGL 404
           ++  C +G   +A  LL++M E    PD  T   +I +  +  +   A K+   M+  GL
Sbjct: 620 IQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMRGL 679

Query: 405 ML 406
           ++
Sbjct: 680 LV 681



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 73/319 (22%), Positives = 134/319 (42%), Gaps = 23/319 (7%)

Query: 248 KGMHYEA-LAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGATPNHVTY 306
           K  HY   L++  +ME +GI  + +  N LI+ FC+ G +  A  +       T      
Sbjct: 122 KSKHYHTVLSLSQKMEFKGIKLNFLNCNILINSFCQLGLIPFAFSVL------TRGVYWI 175

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
             L D + R N LE+  RL  ++        ++ ++   ++L  +  ++  +RL N ++ 
Sbjct: 176 EILKDCFDRKN-LEDFKRLCWIV--------LILWD--FKRLFLKDFLQ--SRLFNVLHS 222

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMK-VKNRMLEAGLMLDQFTYKALIHGFCKAKEMD 425
            KI  +     T I   C +     +++    ++L+ G   D  T    I GFC   ++ 
Sbjct: 223 FKILIE--YHKTFIKQKCLLKSFEISIEYTPPKILKNGYEPDTITLTTFIKGFCLKGQIH 280

Query: 426 IAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
            A      ++  GF     SY  L++G C     +A L+LL     + +  DV +Y  +I
Sbjct: 281 QALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALELLRRNDGKLVQPDVVMYNTII 340

Query: 486 RRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
              CK + V+ A  L++      I  D   Y +L   +   G+ K   D+ + M  + ++
Sbjct: 341 DGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNII 400

Query: 546 ITLKIYRSFSASYAKDNEI 564
             +  +      + KD  I
Sbjct: 401 PDVYTFSILVDGFCKDGNI 419


>gi|15233142|ref|NP_191058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75210358|sp|Q9SV46.1|PP282_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g54980, mitochondrial; Flags: Precursor
 gi|4678295|emb|CAB41086.1| putative protein [Arabidopsis thaliana]
 gi|28393168|gb|AAO42016.1| unknown protein [Arabidopsis thaliana]
 gi|332645801|gb|AEE79322.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 851

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 133/470 (28%), Positives = 223/470 (47%), Gaps = 41/470 (8%)

Query: 149 GLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIH 208
            L +FD+M      P+    +VL+    K+   +   + YKKM  LG+  ++   + +I 
Sbjct: 358 ALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQ 417

Query: 209 ACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISP 268
              K    ++  KL  E  F+   A++F  NT+++  CK+G   EA  +  +ME  GI P
Sbjct: 418 GWLKGQKHEEALKLFDE-SFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGP 476

Query: 269 DIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLR 326
           ++V+YN+++ G CR+  M  AR +F +I  KG  PN+ TY+ LIDG  R +D + AL + 
Sbjct: 477 NVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVV 536

Query: 327 EVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKK------------------ 368
             M +  +    V Y +I+  LCK G+   A  LL  M E+K                  
Sbjct: 537 NHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFK 596

Query: 369 ------------------IAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
                             I+P+ +T  +L+N  CK      A+++++ M   G+ LD   
Sbjct: 597 EGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPA 656

Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFV 470
           Y ALI GFCK   M+ A  L   +L+ G +PS   Y+ L+ G+ N  N  A L L  + +
Sbjct: 657 YGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKML 716

Query: 471 SRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPK 530
             GL  D+  Y  LI    K   +  A  L+  MQ  G++ D +IYT +     + G+  
Sbjct: 717 KDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFV 776

Query: 531 ACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSH--VVDRGLM 578
               + ++M +  +   + IY +  A + ++  + + F  H  ++D+G++
Sbjct: 777 KVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGIL 826



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 102/388 (26%), Positives = 193/388 (49%), Gaps = 7/388 (1%)

Query: 132 VLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKM 191
           +LSWL         T +  ++  +M    + P++ +   ++    + +  D+   V+  +
Sbjct: 449 ILSWL----CKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNI 504

Query: 192 VQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMH 251
           ++ G+  N + Y++LI  C ++ D     +++  M   ++  +   Y T+I   CK G  
Sbjct: 505 LEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQT 564

Query: 252 YEALAVQDRM-EREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTT 308
            +A  +   M E + +    ++YNS+I GF +EG M  A   + ++   G +PN +TYT+
Sbjct: 565 SKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTS 624

Query: 309 LIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKK 368
           L++G C+ N +++AL +R+ M  KGV   +  Y +++   CK   +  A+ L +E+ E+ 
Sbjct: 625 LMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEG 684

Query: 369 IAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAK 428
           + P     N+LI+ +  +G+  +A+ +  +ML+ GL  D  TY  LI G  K   + +A 
Sbjct: 685 LNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILAS 744

Query: 429 ELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRF 488
           EL   M   G  P    Y+ +V+G   K     ++K+ +E     +  +V +Y A+I   
Sbjct: 745 ELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGH 804

Query: 489 CKKEKVDYAQRLFNLMQGNGILGDSVIY 516
            ++  +D A RL + M   GIL D   +
Sbjct: 805 YREGNLDEAFRLHDEMLDKGILPDGATF 832



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 114/420 (27%), Positives = 185/420 (44%), Gaps = 11/420 (2%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           SV++ L+   ++P+      +W   +  + +   D   V   + V +   +  A  +L+ 
Sbjct: 74  SVIDVLLNRRNNPEAALRFYNWARPWRGSFE-DGDVFWVLIHILVSSPETYGRASDLLIR 132

Query: 174 SLAKDRLTDMVWKVYKKMV----QLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFK 229
            ++    T M   +  K+V      G   N   +N L++A  K    D    ++ +M   
Sbjct: 133 YVSTSNPTPMASVLVSKLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLEL 192

Query: 230 DVRADLFTY-NTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
           DV    F Y N  ++   ++    EA  +  RM   G+  D VT   L+    RE +  E
Sbjct: 193 DV-IPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAE 251

Query: 289 ARR-LFRDI-KGATPNHVTYTTLIDGYCRANDLEEALRL-REVMAAKGVYPGVVTYNSIL 345
           A   L R I +GA P+ + Y+  +   C+  DL  A  L RE+   K   P   TY S++
Sbjct: 252 ALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVI 311

Query: 346 RKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLM 405
               K+G + DA RL +EM    I+ + V   +LI  +CK  D  SA+ + ++M + G  
Sbjct: 312 LASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPS 371

Query: 406 LDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKL 465
            +  T+  LI  F K  EM+ A E    M   G +PS      ++ G+      E  LKL
Sbjct: 372 PNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKL 431

Query: 466 LDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWR 525
            DE    GL  +V V   ++   CK+ K D A  L + M+  GI  + V Y ++   + R
Sbjct: 432 FDESFETGLA-NVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCR 490



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 81/309 (26%), Positives = 141/309 (45%), Gaps = 3/309 (0%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG-VVANIHLYNV 205
           Q+ L+V + M   N+  +      ++N L K   T    ++   M++   +  +   YN 
Sbjct: 530 QNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNS 589

Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
           +I    K  ++D       EM    +  ++ TY +L+   CK     +AL ++D M+ +G
Sbjct: 590 IIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKG 649

Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEAL 323
           +  DI  Y +LI GFC+   M  A  LF ++  +G  P+   Y +LI G+    ++  AL
Sbjct: 650 VKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAAL 709

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
            L + M   G+   + TY +++  L K+G +  A+ L  EM    + PD +    ++N  
Sbjct: 710 DLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGL 769

Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY 443
            K G     +K+   M +  +  +   Y A+I G  +   +D A  L   MLD G  P  
Sbjct: 770 SKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDG 829

Query: 444 CSYSWLVDG 452
            ++  LV G
Sbjct: 830 ATFDILVSG 838



 Score = 75.1 bits (183), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 58/232 (25%), Positives = 102/232 (43%), Gaps = 1/232 (0%)

Query: 298 GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDA 357
           G   N   +  L++ Y +    + A+ +   M    V P     N  L  L +   + +A
Sbjct: 158 GFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEA 217

Query: 358 NRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHG 417
             L + M    +  DNVT   L+ A  +    A A++V +R +E G   D   Y   +  
Sbjct: 218 KELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQA 277

Query: 418 FCKAKEMDIAKELLFGMLDAGFS-PSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCV 476
            CK  ++ +A  LL  M +     PS  +Y+ ++     + N +  ++L DE +S G+ +
Sbjct: 278 CCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISM 337

Query: 477 DVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
           +V    +LI   CK   +  A  LF+ M+  G   +SV ++ L   + + GE
Sbjct: 338 NVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGE 389



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/144 (28%), Positives = 73/144 (50%)

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           L+  + NL      L ++ +M    L   L   T L++ L KD    +  ++Y +M  +G
Sbjct: 695 LISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVG 754

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
           +V +  +Y V+++   K     KV K+  EM+  +V  ++  YN +IA + ++G   EA 
Sbjct: 755 LVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAF 814

Query: 256 AVQDRMEREGISPDIVTYNSLIHG 279
            + D M  +GI PD  T++ L+ G
Sbjct: 815 RLHDEMLDKGILPDGATFDILVSG 838



 Score = 47.0 bits (110), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 48/203 (23%), Positives = 87/203 (42%), Gaps = 1/203 (0%)

Query: 341 YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML 400
           +N +L    K+ +   A  ++N+M E  + P     N  ++A  +      A ++ +RM+
Sbjct: 166 FNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMV 225

Query: 401 EAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEE 460
             G+  D  T + L+    + ++   A E+L   ++ G  P    YS  V   C   +  
Sbjct: 226 AIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLA 285

Query: 461 ALLKLLDEFVSRGLCV-DVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
               LL E   + LCV     Y ++I    K+  +D A RL + M  +GI  + V  TSL
Sbjct: 286 MANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSL 345

Query: 520 AYAYWRAGEPKACSDILDDMYRR 542
              + +  +  +   + D M + 
Sbjct: 346 ITGHCKNNDLVSALVLFDKMEKE 368


>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63080, mitochondrial; Flags: Precursor
 gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
 gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 614

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 146/540 (27%), Positives = 239/540 (44%), Gaps = 64/540 (11%)

Query: 76  HSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSW 135
           H+L ++  MI+ L +      A  +L K+    +  +   LN+L+      +G  H    
Sbjct: 98  HNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLL------NGFCHG--- 148

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
                       + + + DQM      P     T L++ L +         + ++MV  G
Sbjct: 149 --------NRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKG 200

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
              ++  Y  +I+  CK  + D    LL +ME   + AD+  Y+T+I   CK     +AL
Sbjct: 201 CQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDAL 260

Query: 256 AVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGY 313
            +   M+ +GI PD+ TY+SLI   C  GR  +A RL  D+  +   PN VT+ +LID +
Sbjct: 261 NLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAF 320

Query: 314 CRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDN 373
            +   L EA +L + M  + + P +VTYNS++   C   R+ +A ++   M  K   PD 
Sbjct: 321 AKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDV 380

Query: 374 VTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFG 433
           VT NTLIN +CK       M++   M   GL+ +  TY  LIHGF +A + D A+ +   
Sbjct: 381 VTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQ 440

Query: 434 MLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLD--------------EFVSRGLC---- 475
           M+  G  P+  +Y+ L+DG C     E  + + +                +S G+C    
Sbjct: 441 MVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGK 500

Query: 476 -----------------VDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTS 518
                             DV  Y  +I  FCKK   + A  LF  M+ +G L DS  Y +
Sbjct: 501 VEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNT 560

Query: 519 LAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLM 578
           L  A+ R G+  A ++++ +M   R          F+   +    + D+     +D+G +
Sbjct: 561 LIRAHLRDGDKAASAELIKEMRSCR----------FAGDASTYGLVTDMLHDGRLDKGFL 610



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 114/383 (29%), Positives = 199/383 (51%), Gaps = 2/383 (0%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           + + +F +M      P +   + LL+++AK +  D+V    +KM  LGV  N++ YN++I
Sbjct: 48  EAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMI 107

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           +  C+ S +     +L +M        + T N+L+  +C      EA+A+ D+M   G  
Sbjct: 108 NCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQ 167

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEALRL 325
           PD VT+ +L+HG  +  +  EA  L     +KG  P+ VTY  +I+G C+  + + AL L
Sbjct: 168 PDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNL 227

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
              M    +   VV Y++++  LCK   + DA  L  EM+ K I PD  T ++LI+  C 
Sbjct: 228 LNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCN 287

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            G  + A ++ + MLE  +  +  T+ +LI  F K  ++  A++L   M+     P+  +
Sbjct: 288 YGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVT 347

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+ L++G+C  +  +   ++    VS+    DV  Y  LI  FCK +KV     LF  M 
Sbjct: 348 YNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMS 407

Query: 506 GNGILGDSVIYTSLAYAYWRAGE 528
             G++G++V YT+L + +++A +
Sbjct: 408 RRGLVGNTVTYTTLIHGFFQASD 430



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 124/400 (31%), Positives = 197/400 (49%), Gaps = 4/400 (1%)

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
           D    ++ +MV+     +I  ++ L+ A  K    D V     +ME   V  +L+TYN +
Sbjct: 47  DEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIM 106

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGA 299
           I   C++     ALA+  +M + G  P IVT NSL++GFC   R+ EA  L   +   G 
Sbjct: 107 INCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY 166

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
            P+ VT+TTL+ G  + N   EA+ L E M  KG  P +VTY +++  LCK G    A  
Sbjct: 167 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALN 226

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
           LLN+M + KI  D V  +T+I++ CK      A+ +   M   G+  D FTY +LI   C
Sbjct: 227 LLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLC 286

Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
                  A  LL  ML+   +P+  +++ L+D +  +       KL DE + R +  ++ 
Sbjct: 287 NYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIV 346

Query: 480 VYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
            Y +LI  FC  +++D AQ++F LM     L D V Y +L   + +A +     ++  DM
Sbjct: 347 TYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDM 406

Query: 540 YRRRLMITLKIYRSFSASY--AKDNEILDLFWSHVVDRGL 577
            RR L+     Y +    +  A D +   + +  +V  G+
Sbjct: 407 SRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGV 446



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 120/476 (25%), Positives = 219/476 (46%), Gaps = 29/476 (6%)

Query: 47  LLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIAL 106
           LLN +  CH   +S A     +     Y+    +  T++H L ++     A  ++E++ +
Sbjct: 141 LLNGF--CHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVV 198

Query: 107 R----DFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLM 162
           +    D ++  +V+N L K   +PD                      L + ++M    + 
Sbjct: 199 KGCQPDLVTYGAVINGLCK-RGEPDL--------------------ALNLLNKMEKGKIE 237

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
             +   + +++SL K R  D    ++ +M   G+  ++  Y+ LI   C         +L
Sbjct: 238 ADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRL 297

Query: 223 LCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR 282
           L +M  + +  ++ T+N+LI  + K+G   EA  + D M +  I P+IVTYNSLI+GFC 
Sbjct: 298 LSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCM 357

Query: 283 EGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVT 340
             R+ EA+++F  +  K   P+ VTY TLI+G+C+A  + + + L   M+ +G+    VT
Sbjct: 358 HDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVT 417

Query: 341 YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML 400
           Y +++    +     +A  +  +M    + P+ +T NTL++  CK G    AM V   + 
Sbjct: 418 YTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ 477

Query: 401 EAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEE 460
           ++ +  D +TY  +  G CKA +++   +L   +   G  P   +Y+ ++ G+C K  +E
Sbjct: 478 KSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKE 537

Query: 461 ALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIY 516
               L  +    G   D   Y  LIR   +      +  L   M+     GD+  Y
Sbjct: 538 EAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTY 593


>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
          Length = 974

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 121/402 (30%), Positives = 197/402 (49%), Gaps = 20/402 (4%)

Query: 155 QMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSS 214
           +MR   ++P+   CT L+N   K          Y+ MV  G++ +   Y VL++   K+ 
Sbjct: 547 EMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKND 606

Query: 215 DVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYN 274
            VD  E++  EM  K +  D+F+Y  LI  + K G   +A ++ D M  EG++P+++ YN
Sbjct: 607 KVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYN 666

Query: 275 SLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAK 332
            L+ GFCR G + +A+ L  +  +KG  PN VTY T+IDGYC++ DL EA RL + M  K
Sbjct: 667 MLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLK 726

Query: 333 GVYPGVVTYNSILRKLCKEGRIRDANRLLN--EMNEKKIAPDNVTCNTLINAYCKIGDTA 390
           G+ P    Y +++   C   R+ D  R +     N+K  A      N LIN   K G T 
Sbjct: 727 GLVPDSFVYTTLVDGCC---RLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTE 783

Query: 391 SAMKVKNRMLEAGLMLDQF------TYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
              +V NR+++     D+F      TY  +I   CK   ++ AKEL   M +A   P+  
Sbjct: 784 LKTEVLNRLMDGSF--DRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVI 841

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
           +Y+ L++GY        +  + DE ++ G+  D  +Y  +I  F K+     A  L + M
Sbjct: 842 TYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQM 901

Query: 505 QGNGILGDSVIYT-----SLAYAYWRAGEPKACSDILDDMYR 541
                + D    +     +L   + + GE +    ++++M R
Sbjct: 902 FAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVR 943



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 124/420 (29%), Positives = 195/420 (46%), Gaps = 3/420 (0%)

Query: 148 DG-LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           DG L++ + M    L+P  +   VL++ L K +  +    +  +M  LGV  + H Y++L
Sbjct: 259 DGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLL 318

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           I    K  + D  + L+ EM    +    + Y+  I +  K+G+  +A A+ D M   G+
Sbjct: 319 IDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGL 378

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALR 324
            P    Y SLI G+CRE  +R+   L  ++K      +  TY T++ G C + DL+ A  
Sbjct: 379 IPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYN 438

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           + + M A G  P VV Y ++++   +  R  DA R+L EM E+ IAPD    N+LI    
Sbjct: 439 IVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLS 498

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           K      A      M+E GL  + FTY A I G+ +A E   A + +  M + G  P+  
Sbjct: 499 KAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKV 558

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
             + L++ YC K             V +G+  D   Y  L+    K +KVD A+ +F  M
Sbjct: 559 LCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREM 618

Query: 505 QGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
           +G GI  D   Y  L   + + G  +  S I D+M    L   + IY      + +  EI
Sbjct: 619 RGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEI 678



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 104/407 (25%), Positives = 197/407 (48%), Gaps = 4/407 (0%)

Query: 160 NLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKV 219
           N+ P+++ C + +  ++K+ + +    ++  M+  G++     Y  LI   C+  +V + 
Sbjct: 344 NIKPYMYDCCICV--MSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQG 401

Query: 220 EKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHG 279
            +LL EM+ +++    +TY T++   C  G    A  +   M   G  P++V Y +LI  
Sbjct: 402 YELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKT 461

Query: 280 FCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPG 337
           F +  R  +A R+ +++K  G  P+   Y +LI G  +A  ++EA      M   G+ P 
Sbjct: 462 FLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPN 521

Query: 338 VVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKN 397
             TY + +    +      A++ + EM E  + P+ V C  LIN YCK G    A     
Sbjct: 522 AFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYR 581

Query: 398 RMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKN 457
            M++ G++ D  TY  L++G  K  ++D A+E+   M   G +P   SY  L++G+    
Sbjct: 582 SMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLG 641

Query: 458 NEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYT 517
           N +    + DE V  GL  +V +Y  L+  FC+  +++ A+ L + M   G+  ++V Y 
Sbjct: 642 NMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYC 701

Query: 518 SLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
           ++   Y ++G+      + D+M  + L+    +Y +      + N++
Sbjct: 702 TIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDV 748



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 128/491 (26%), Positives = 221/491 (45%), Gaps = 57/491 (11%)

Query: 145 MTQDGLQ-----VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
           M+++G+      +FD M    L+P   A   L+    +++     +++  +M +  +V +
Sbjct: 357 MSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVIS 416

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
            + Y  ++   C S D+D    ++ EM     R ++  Y TLI  + +     +A+ V  
Sbjct: 417 PYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLK 476

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRAN 317
            M+ +GI+PDI  YNSLI G  +  RM EAR    ++   G  PN  TY   I GY  A+
Sbjct: 477 EMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEAS 536

Query: 318 DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRI----------------------- 354
           +   A +  + M   GV P  V    ++ + CK+G++                       
Sbjct: 537 EFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYT 596

Query: 355 ------------RDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEA 402
                        DA  +  EM  K IAPD  +   LIN + K+G+   A  + + M+E 
Sbjct: 597 VLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEE 656

Query: 403 GLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEAL 462
           GL  +   Y  L+ GFC++ E++ AKELL  M   G  P+  +Y  ++DGYC   +    
Sbjct: 657 GLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEA 716

Query: 463 LKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYA 522
            +L DE   +GL  D  VY  L+   C+   V+ A  +F   +  G    +  + +L   
Sbjct: 717 FRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNK-KGCASSTAPFNALINW 775

Query: 523 YWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEIL-DLFWSHVVDRGLM--S 579
            ++ G+ +  +++L+     RLM       SF   + K N++  ++   ++   G +  +
Sbjct: 776 VFKFGKTELKTEVLN-----RLMDG-----SFD-RFGKPNDVTYNIMIDYLCKEGNLEAA 824

Query: 580 KHIFKEMQLRN 590
           K +F +MQ  N
Sbjct: 825 KELFHQMQNAN 835



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 99/357 (27%), Positives = 168/357 (47%), Gaps = 45/357 (12%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D  ++F +MR   + P + +  VL+N  +K         ++ +MV+ G+  N+ +YN+L+
Sbjct: 610 DAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLL 669

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
              C+S +++K ++LL EM  K +  +  TY T+I  YCK G   EA  + D M+ +G+ 
Sbjct: 670 GGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLV 729

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDIK--------------------GAT------- 300
           PD   Y +L+ G CR   +  A  +F   K                    G T       
Sbjct: 730 PDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVL 789

Query: 301 -------------PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRK 347
                        PN VTY  +ID  C+  +LE A  L   M    + P V+TY S+L  
Sbjct: 790 NRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNG 849

Query: 348 LCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRM-----LEA 402
             K GR  +   + +E     I PD++  + +INA+ K G T  A+ + ++M     ++ 
Sbjct: 850 YDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDD 909

Query: 403 GLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNE 459
           G  L   T +AL+ GF K  EM++A++++  M+   + P   +   L++  C  +N+
Sbjct: 910 GCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCISSNQ 966



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 87/312 (27%), Positives = 143/312 (45%), Gaps = 16/312 (5%)

Query: 269 DIVTYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTL-IDGYCRANDLEEALRLRE 327
           D+ TY+ LI   CR G ++    L +D+   T       TL +DG         AL+L+E
Sbjct: 220 DVKTYHMLIIAHCRAGNVQ----LGKDVLFKTEKEFRTATLNVDG---------ALKLKE 266

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
            M  KG+ P   TY+ ++  LCK  R+ DA  LL EM+   ++ DN T + LI+   K  
Sbjct: 267 SMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGR 326

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
           +  +A  + + M+  G+ +  + Y   I    K   M+ AK L  GM+ +G  P   +Y+
Sbjct: 327 NADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYA 386

Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGN 507
            L++GYC + N     +LL E   R + +    Y  +++  C    +D A  +   M  +
Sbjct: 387 SLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIAS 446

Query: 508 GILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSF--SASYAKDNEIL 565
           G   + VIYT+L   + +         +L +M  + +   +  Y S     S AK  +  
Sbjct: 447 GCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEA 506

Query: 566 DLFWSHVVDRGL 577
             F   +V+ GL
Sbjct: 507 RSFLVEMVENGL 518


>gi|148907853|gb|ABR17050.1| unknown [Picea sitchensis]
 gi|224284228|gb|ACN39850.1| unknown [Picea sitchensis]
          Length = 420

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 108/318 (33%), Positives = 166/318 (52%), Gaps = 4/318 (1%)

Query: 203 YNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRME 262
           Y+  I+  CK   + +  ++  EME K    D FTYN LI   CK       +++ D M+
Sbjct: 94  YSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLMDEMQ 153

Query: 263 REGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLE 320
             G SP +VTY +LIHGFC  GR+  A  +  ++  +G TPN VTYT LI G C   ++E
Sbjct: 154 ARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDCGEVE 213

Query: 321 EALRLREVMAAKG--VYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT 378
            A+ + + M  +G    P VVTY  ++  LC++G        L+EM      P+N T   
Sbjct: 214 RAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNATYTA 273

Query: 379 LINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAG 438
           LI+  C+ G    A  + N M+  G  LD   Y +LI G CK  E+D A+E+   M++ G
Sbjct: 274 LIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILMVEKG 333

Query: 439 FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQ 498
            +P   +Y+ L+ G C+    +  L L+ E  ++G+  +   Y  LI  F + ++ D+A 
Sbjct: 334 VAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADRTDHAL 393

Query: 499 RLFNLMQGNGILGDSVIY 516
           +L N M+ NG++    IY
Sbjct: 394 QLVNEMKSNGLMPAGDIY 411



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 101/319 (31%), Positives = 165/319 (51%), Gaps = 4/319 (1%)

Query: 172 LNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDV 231
           +N L K        +++++M + G   +   YN+LI+  CK + ++    L+ EM+ +  
Sbjct: 98  INGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLMDEMQARGF 157

Query: 232 RADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARR 291
              + TY TLI  +C  G    A+ + D ME  GI+P+ VTY +LI G C  G +  A  
Sbjct: 158 SPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDCGEVERAIL 217

Query: 292 LFRDIK----GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRK 347
           + +++K       PN VTYT LI G C+    E  +   + M   G +P   TY +++  
Sbjct: 218 VLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNATYTALIHG 277

Query: 348 LCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLD 407
           LC++G   +A  LLNEM       D V  N+LI+  CK+G+   A +++  M+E G+  D
Sbjct: 278 LCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILMVEKGVAPD 337

Query: 408 QFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLD 467
            FTY +LI G C A  +D A  L+  M   G  P+  +Y+ L++G+   +  +  L+L++
Sbjct: 338 VFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADRTDHALQLVN 397

Query: 468 EFVSRGLCVDVSVYRALIR 486
           E  S GL     +Y+ L +
Sbjct: 398 EMKSNGLMPAGDIYKILFK 416



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 101/324 (31%), Positives = 164/324 (50%), Gaps = 4/324 (1%)

Query: 233 ADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRL 292
            D+ +Y+  I   CKKG   EA+ +   ME +G +PD  TYN LI+G C++ ++     L
Sbjct: 89  TDVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSL 148

Query: 293 FRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
             ++  +G +P  VTYTTLI G+C A  ++ A+ + + M  +G+ P  VTY ++++ LC 
Sbjct: 149 MDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCD 208

Query: 351 EGRIRDANRLLNEMNEK--KIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ 408
            G +  A  +L EM  +  +  P+ VT   LI+  C+ G     M+  + M+ +G   + 
Sbjct: 209 CGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNN 268

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
            TY ALIHG C+      A  LL  M+  G       Y+ L+DG C     +   ++   
Sbjct: 269 ATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQIL 328

Query: 469 FVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
            V +G+  DV  Y +LI+  C    +D A  L   M+  GI+ +SV YT+L   + +A  
Sbjct: 329 MVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADR 388

Query: 529 PKACSDILDDMYRRRLMITLKIYR 552
                 ++++M    LM    IY+
Sbjct: 389 TDHALQLVNEMKSNGLMPAGDIYK 412



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 98/306 (32%), Positives = 139/306 (45%), Gaps = 4/306 (1%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           + +++F +M      P      +L+N L KD   +M   +  +M   G    +  Y  LI
Sbjct: 109 EAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLMDEMQARGFSPTVVTYTTLI 168

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG-- 265
           H  C +  VD    +L EME + +  +  TY  LI   C  G    A+ V   M+  G  
Sbjct: 169 HGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDCGEVERAILVLKEMKLRGNE 228

Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEAL 323
             P++VTY  LIHG C++G          +  I G  PN+ TYT LI G C+     EA 
Sbjct: 229 CCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQKGSFLEAA 288

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
            L   M A G    VV YNS++  LCK G +  A  +   M EK +APD  T  +LI   
Sbjct: 289 VLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILMVEKGVAPDVFTYTSLIQGL 348

Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY 443
           C  G    A+ +   M   G++ +  TY  LI+GF +A   D A +L+  M   G  P+ 
Sbjct: 349 CDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADRTDHALQLVNEMKSNGLMPAG 408

Query: 444 CSYSWL 449
             Y  L
Sbjct: 409 DIYKIL 414



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 68/229 (29%), Positives = 108/229 (47%), Gaps = 2/229 (0%)

Query: 338 VVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKN 397
           V++Y+  +  LCK+G+I +A  +  EM EK  APD+ T N LIN  CK       + + +
Sbjct: 91  VISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLMD 150

Query: 398 RMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKN 457
            M   G      TY  LIHGFC A  +D A ++L  M   G +P+  +Y+ L+ G C+  
Sbjct: 151 EMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDCG 210

Query: 458 NEEALLKLLDEFVSRG--LCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVI 515
             E  + +L E   RG   C +V  Y  LI   C+K   +      + M  +G   ++  
Sbjct: 211 EVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNAT 270

Query: 516 YTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
           YT+L +   + G     + +L++M      + + IY S      K  E+
Sbjct: 271 YTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGEL 319



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 65/196 (33%), Positives = 100/196 (51%), Gaps = 2/196 (1%)

Query: 155 QMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSS 214
           ++R +   P++   T L++ L +  L +M  +   +M+  G   N   Y  LIH  C+  
Sbjct: 223 KLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQKG 282

Query: 215 DVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYN 274
              +   LL EM       D+  YN+LI   CK G    A  +Q  M  +G++PD+ TY 
Sbjct: 283 SFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILMVEKGVAPDVFTYT 342

Query: 275 SLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAK 332
           SLI G C  G + EA  L +++  KG  PN VTYTTLI+G+ +A+  + AL+L   M + 
Sbjct: 343 SLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADRTDHALQLVNEMKSN 402

Query: 333 GVYPGVVTYNSILRKL 348
           G+ P    Y  + + L
Sbjct: 403 GLMPAGDIYKILFKSL 418


>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 654

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 123/444 (27%), Positives = 223/444 (50%), Gaps = 27/444 (6%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           + L +F QM      P++   T L+N L ++        +  +M++ G+  N   Y  ++
Sbjct: 166 EALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIV 221

Query: 208 HACCKSSDVDKVEKLLCEME-FKDVRADLFTY-----NTLIALYCKKGMHYEALAV-QDR 260
              CK  D      LL +ME    ++ ++  +       +I  +C  G   EA  + Q+ 
Sbjct: 222 DGMCKMGDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEM 281

Query: 261 MEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRAND 318
           +ER+ ISPD+VTYN+LI+ F +EG+  EA  L+ ++  +G  P+ +TY+++IDG+C+ N 
Sbjct: 282 LERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNR 341

Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT 378
           L+ A  +  +MA KG  P ++T+N+++   C+  R+ D  +LL+EM E  +  + +T  T
Sbjct: 342 LDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTT 401

Query: 379 LINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGM---- 434
           LI+ +C++GD  +A  +   M+ +G+  +  T   L+ G C   ++  A E+   M    
Sbjct: 402 LIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 461

Query: 435 --LDA-----GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRR 487
             +DA     G  P   +Y+ L+ G  N+       +L +E   RG+  D   Y ++I  
Sbjct: 462 MDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHG 521

Query: 488 FCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMIT 547
            CK+ ++D A ++F+ M       + V +T+L   Y +AG      ++  +M RR ++  
Sbjct: 522 LCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVAN 581

Query: 548 LKIYRSFSASYAKDNEI---LDLF 568
              Y +    + K   I   LD+F
Sbjct: 582 AITYITLIHGFRKVGNINGALDIF 605



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 131/541 (24%), Positives = 238/541 (43%), Gaps = 76/541 (14%)

Query: 54  CHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTP 113
           C    L  A   + +     +  ++ +  T++H L        A ++  ++   + ++  
Sbjct: 124 CSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQMCKPNVVTFT 183

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           +++N L +          V+  + +     +M +DGLQ           P+      +++
Sbjct: 184 TLMNGLCR-------EGRVVEAVALLD---RMLEDGLQ-----------PNQITYGTIVD 222

Query: 174 SLAKDRLTDMVWKVYKKMVQLG------VVANIHLYNVLIHACCKSSDVDKVEKLLCEM- 226
            + K   T     + +KM ++       V+  +     +I+  C S    + ++LL EM 
Sbjct: 223 GMCKMGDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEML 282

Query: 227 EFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRM 286
           E K +  D+ TYN LI  + K+G  +EA  + D M   GI P  +TY+S+I GFC++ R+
Sbjct: 283 ERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRL 342

Query: 287 REARRLF--RDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSI 344
             A  +F     KG +P+ +T+ TLI GYCRA  +++ ++L   M   G+    +TY ++
Sbjct: 343 DAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTL 402

Query: 345 LRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKV--------- 395
           +   C+ G +  A  LL EM    + P+ VTCNTL++  C  G    A+++         
Sbjct: 403 IHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKM 462

Query: 396 ---------------------------KNRMLEA----------GLMLDQFTYKALIHGF 418
                                      + + LEA          G++ D  TY ++IHG 
Sbjct: 463 DIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGL 522

Query: 419 CKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDV 478
           CK   +D A ++   M    FSP+  +++ L++GYC     +  L+L  E   RG+  + 
Sbjct: 523 CKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANA 582

Query: 479 SVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDD 538
             Y  LI  F K   ++ A  +F  M  +G+  D++   ++    W   E K    +L+D
Sbjct: 583 ITYITLIHGFRKVGNINGALDIFQEMMASGVYPDTITIRNMLTGLWSKEELKRAVAMLED 642

Query: 539 M 539
           +
Sbjct: 643 L 643



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 128/464 (27%), Positives = 221/464 (47%), Gaps = 22/464 (4%)

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
           +  +K  +D + +F  M     +P +     L+  + +    D+V  +++KM    V  N
Sbjct: 53  FHEIKGLEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPCN 112

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
            + + +L+   C  S +        ++        + T++TL+   C +    EAL +  
Sbjct: 113 AYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFH 172

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREA----RRLFRDIKGATPNHVTYTTLIDGYCR 315
           +M      P++VT+ +L++G CREGR+ EA     R+  D  G  PN +TY T++DG C+
Sbjct: 173 QM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLED--GLQPNQITYGTIVDGMCK 226

Query: 316 ANDLEEALR-LREVMAAKGVYPGVVTY-----NSILRKLCKEGRIRDANRLLNEMNE-KK 368
             D   AL  LR++     + P VV +       ++   C  GR  +A +LL EM E KK
Sbjct: 227 MGDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKK 286

Query: 369 IAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAK 428
           I+PD VT N LINA+ K G    A ++ + ML  G++    TY ++I GFCK   +D A+
Sbjct: 287 ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAE 346

Query: 429 ELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRF 488
            + + M   G SP   +++ L+ GYC     +  +KLL E    GL  +   Y  LI  F
Sbjct: 347 HMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGF 406

Query: 489 CKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITL 548
           C+   ++ AQ L   M  +G+  + V   +L       G+ K   ++   M + ++ I  
Sbjct: 407 CQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDA 466

Query: 549 KIYRSFSASYAKDNEILDLFWSHVVDRG--LMSKHIFKEMQLRN 590
                F+     D +  ++  S +++ G  L ++ +++EM  R 
Sbjct: 467 S--HPFNG-VEPDVQTYNILISGLINEGKFLEAEELYEEMPHRG 507



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 110/415 (26%), Positives = 190/415 (45%), Gaps = 21/415 (5%)

Query: 112 TPSVLNALVKIHDDPDGNSHVLSW-------LVIFYANLKMTQDGLQVFDQM-RVHNLMP 163
           T S LN L K+ +      +V+ W       ++  + +     +  Q+  +M     + P
Sbjct: 230 TVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISP 289

Query: 164 HLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLL 223
            +     L+N+  K+       ++Y +M+  G++ +   Y+ +I   CK + +D  E + 
Sbjct: 290 DVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMF 349

Query: 224 CEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCRE 283
             M  K    D+ T+NTLIA YC+     + + +   M   G+  + +TY +LIHGFC+ 
Sbjct: 350 YLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQV 409

Query: 284 GRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAK--------- 332
           G +  A+ L +++   G  PN VT  TL+DG C    L++AL + + M            
Sbjct: 410 GDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHP 469

Query: 333 --GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTA 390
             GV P V TYN ++  L  EG+  +A  L  EM  + I PD +T N++I+  CK     
Sbjct: 470 FNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLD 529

Query: 391 SAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLV 450
            A ++ + M       +  T+  LI+G+CKA  +D   EL   M   G   +  +Y  L+
Sbjct: 530 EATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLI 589

Query: 451 DGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
            G+    N    L +  E ++ G+  D    R ++     KE++  A  +   +Q
Sbjct: 590 HGFRKVGNINGALDIFQEMMASGVYPDTITIRNMLTGLWSKEELKRAVAMLEDLQ 644



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 61/294 (20%), Positives = 113/294 (38%), Gaps = 38/294 (12%)

Query: 309 LIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKK 368
           L  G+     LE+A+ L   M      P V+ +  ++  + + GR+     L  +M  ++
Sbjct: 49  LRSGFHEIKGLEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRR 108

Query: 369 IAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCK----AKEM 424
           +  +  +   L+  +C       A+    ++ + G      T+  L+HG C     ++ +
Sbjct: 109 VPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEAL 168

Query: 425 DI---------------------------AKELLFGMLDAGFSPSYCSYSWLVDGYCNKN 457
           D+                           A  LL  ML+ G  P+  +Y  +VDG C   
Sbjct: 169 DLFHQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMG 228

Query: 458 NEEALLKLLDEFVSRGLCVDVSVYRALIRR------FCKKEKVDYAQRLFN-LMQGNGIL 510
           +  + L LL +           V   L RR      FC   +   AQ+L   +++   I 
Sbjct: 229 DTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKIS 288

Query: 511 GDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
            D V Y +L  A+ + G+     ++ D+M  R ++ +   Y S    + K N +
Sbjct: 289 PDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRL 342


>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 546

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 109/345 (31%), Positives = 184/345 (53%), Gaps = 5/345 (1%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWK---VYKKMVQLGVVANIHLYNVLIH 208
           + + M+V  +  ++     L++   K      ++K   + K+M   G+  N   +N+LI 
Sbjct: 185 IIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILID 244

Query: 209 ACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISP 268
             CK  +V    K+  EM  + V+ ++ TYN+LI   C  G   EA A++D+M    + P
Sbjct: 245 GFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKP 304

Query: 269 DIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLR 326
           +I+T+N+L++GFC+   +++A  LF D+  +G TPN  TY  LID YC+  ++E+A  L 
Sbjct: 305 NIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALY 364

Query: 327 EVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKI 386
            +M  KGV P V TYN ++  LC++G +  A  L++EM+ K +  D +T N LI++ C  
Sbjct: 365 RIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNK 424

Query: 387 GDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSY 446
           G+   A+++ + M   GL   Q TY  +I G+CK   +  A  L   M   G   +  +Y
Sbjct: 425 GEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATY 484

Query: 447 SWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
           + L+ G+C K+  E    LL+E + +GL  +   Y  +     +K
Sbjct: 485 NVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIVTEEMMEK 529



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 117/448 (26%), Positives = 226/448 (50%), Gaps = 7/448 (1%)

Query: 146 TQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNV 205
           TQ+  Q+   +   +   +     +L+ + AK+  T + ++ +K+    G+  ++   N 
Sbjct: 74  TQEQTQILLSVSGDSFCANSIIVDILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNP 133

Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
           L+    K  ++  +E +  EM  + +   L ++N +I   CK G   +A  + + M+  G
Sbjct: 134 LMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRG 193

Query: 266 ISPDIVTYNSLIHGFCREGR---MREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLE 320
           +S +++TYN+LI G+C+ G+   M +A  + ++++  G  PN VT+  LIDG+C+  ++ 
Sbjct: 194 VSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVS 253

Query: 321 EALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLI 380
            A+++   M  +GV P VVTYNS++  LC  G++ +A  L ++M    + P+ +T N L+
Sbjct: 254 AAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALL 313

Query: 381 NAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFS 440
           N +CK      A ++ + M + G+  +  TY  LI  +CK + M+ A  L   ML  G  
Sbjct: 314 NGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVC 373

Query: 441 PSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRL 500
           P   +Y+ L+ G C K + EA   L+ E  ++ L  D+  Y  LI   C K ++  A RL
Sbjct: 374 PDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRL 433

Query: 501 FNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAK 560
            + M   G+    + Y ++   Y + G  +A  ++   M +   +  +  Y      + K
Sbjct: 434 LDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCK 493

Query: 561 DNEILDL--FWSHVVDRGLMSKHIFKEM 586
            +++ D     + ++++GL+   +  E+
Sbjct: 494 KDKLEDANGLLNEMLEKGLIPNRMTYEI 521



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 89/286 (31%), Positives = 145/286 (50%), Gaps = 2/286 (0%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N    + L+  +   K     ++VF +M    + P++     L+N L  +   +    + 
Sbjct: 235 NEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALR 294

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
            +MV   +  NI  +N L++  CK+  V +  +L  +M  + +  ++ TYN LI  YCK 
Sbjct: 295 DQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKD 354

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR--DIKGATPNHVTY 306
               +A A+   M  +G+ PD+ TYN LI G CR+G +  AR L    D K    + +TY
Sbjct: 355 ENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITY 414

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
             LID  C   ++++ALRL + M  KG+ P  +TYN+++   CKEG +R A  L ++M +
Sbjct: 415 NILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEK 474

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYK 412
                +  T N LI  +CK      A  + N MLE GL+ ++ TY+
Sbjct: 475 VGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYE 520



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 91/305 (29%), Positives = 158/305 (51%), Gaps = 19/305 (6%)

Query: 54  CHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTP 113
           C   ++S A   +AE      K ++ ++ ++I+ L  N     A       ALRD     
Sbjct: 247 CKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEA------TALRD----- 295

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
            ++N+ +K    P+  +H  + L+  +   KM +   ++FD M    + P++    +L++
Sbjct: 296 QMVNSCLK----PNIITH--NALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILID 349

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
           +  KD   +  + +Y+ M+  GV  ++  YN LI   C+  D++    L+ EM+ K ++A
Sbjct: 350 AYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKA 409

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           DL TYN LI   C KG   +AL + D M R+G+ P  +TYN++I G+C+EG +R A  L 
Sbjct: 410 DLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLR 469

Query: 294 RDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
             ++  G   N  TY  LI G+C+ + LE+A  L   M  KG+ P  +TY  +  ++ ++
Sbjct: 470 SQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIVTEEMMEK 529

Query: 352 GRIRD 356
           G + D
Sbjct: 530 GFVPD 534


>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
          Length = 742

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 121/417 (29%), Positives = 192/417 (46%), Gaps = 2/417 (0%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           + ++M    + P     T L+    ++   +   +V  +M+++G  A     NVLI+  C
Sbjct: 203 MLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYC 262

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           K   V+     + +        D  TYNT +   C+      AL V D M +EG  PD+ 
Sbjct: 263 KLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVF 322

Query: 272 TYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           TYN +++  C+ G++ EA+ +   +  +G  P+  T+ TLI   C  N LEEAL L   +
Sbjct: 323 TYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQV 382

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
             KGV P V T+N ++  LCK G    A RL  EM      PD VT NTLI+  C +G  
Sbjct: 383 TVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKL 442

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
             A+ +   M   G      TY  +I G CK   ++ A+E+   M   G S +  +++ L
Sbjct: 443 GKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTL 502

Query: 450 VDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGI 509
           +DG C     +    L+++ +S GL  +   Y +++  +CK+  +  A  +   M  NG 
Sbjct: 503 IDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGF 562

Query: 510 LGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
             D V Y +L     +AG  +    +L  M  + +  T K Y     S  + N I D
Sbjct: 563 EVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRD 619



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 137/511 (26%), Positives = 237/511 (46%), Gaps = 21/511 (4%)

Query: 66  WAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRD--------------FLS 111
           ++E      K  + +  T++  L +    ++A  MLE+++ R               F+ 
Sbjct: 169 YSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVE 228

Query: 112 TPSVLNAL-VKIHDDPDGNSHV---LSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHA 167
             S+  AL VK      G S     ++ L+  Y  L   +D L    Q       P    
Sbjct: 229 EGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQIT 288

Query: 168 CTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEME 227
               +N L ++       KV   MVQ G   ++  YN++++  CK+  +++ + +L +M 
Sbjct: 289 YNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMV 348

Query: 228 FKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMR 287
            +    D+ T+NTLIA  C      EAL +  ++  +G+SPD+ T+N LI+  C+ G   
Sbjct: 349 DRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPH 408

Query: 288 EARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSIL 345
            A RLF ++K  G TP+ VTY TLID  C    L +AL L + M + G     +TYN+I+
Sbjct: 409 LALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTII 468

Query: 346 RKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLM 405
             LCK+ RI +A  + ++M+ + I+ + +T NTLI+  CK      A  + N+M+  GL 
Sbjct: 469 DGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQ 528

Query: 406 LDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKL 465
            +  TY +++  +CK  ++  A ++L  M   GF     +Y  L++G C     +  LK+
Sbjct: 529 PNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKV 588

Query: 466 LDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWR 525
           L     +G+      Y  +++   ++  +  A  LF  M   G   D++ Y  +     R
Sbjct: 589 LRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCR 648

Query: 526 AGEP-KACSDILDDMYRRRLMITLKIYRSFS 555
            G P K   D + +M  +  +     +R  +
Sbjct: 649 GGGPIKEAFDFMLEMVDKGFIPEFSSFRMLA 679



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 129/438 (29%), Positives = 212/438 (48%), Gaps = 46/438 (10%)

Query: 148 DGLQVFDQ---MRVHNLMP--HLHACTV----LLNSLAKDRLTDMVWKVYKKMVQLGVVA 198
           +G Q+FD    + ++ L P   + A TV    LLN L +     ++  VY +M   G+  
Sbjct: 120 EGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKP 179

Query: 199 NIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQ 258
           ++  +N L+ A C++  V     +L EM  + V  D  T+ TL+  + ++G    AL V+
Sbjct: 180 DVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVK 239

Query: 259 DRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRA 316
            RM   G S   VT N LI+G+C+ GR+ +A    +     G  P+ +TY T ++G C+ 
Sbjct: 240 ARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQN 299

Query: 317 NDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE---------- 366
           + +  AL++ +VM  +G  P V TYN ++  LCK G++ +A  +LN+M +          
Sbjct: 300 DHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTF 359

Query: 367 -------------------------KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLE 401
                                    K ++PD  T N LINA CK+GD   A+++   M  
Sbjct: 360 NTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKN 419

Query: 402 AGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEA 461
           +G   D+ TY  LI   C   ++  A +LL  M   G   S  +Y+ ++DG C K   E 
Sbjct: 420 SGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEE 479

Query: 462 LLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAY 521
             ++ D+   +G+  +   +  LI   CK +K+D A  L N M   G+  +++ Y S+  
Sbjct: 480 AEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILT 539

Query: 522 AYWRAGEPKACSDILDDM 539
            Y + G+ K  +DIL+ M
Sbjct: 540 HYCKQGDIKKAADILETM 557



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 122/462 (26%), Positives = 203/462 (43%), Gaps = 61/462 (13%)

Query: 46  VLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIA 105
           VL+N Y  C +  +  A     +     ++    ++ T ++ L +N H   A        
Sbjct: 256 VLINGY--CKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHAL------- 306

Query: 106 LRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQ--DGLQVFDQMRVHNLMP 163
                    V++ +V+   DPD    V ++ ++     K  Q  +   + +QM     +P
Sbjct: 307 --------KVMDVMVQEGHDPD----VFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLP 354

Query: 164 HLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLL 223
            +     L+ +L      +    + +++   GV  +++ +N+LI+A CK  D     +L 
Sbjct: 355 DITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLF 414

Query: 224 CEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCRE 283
            EM+      D  TYNTLI   C  G   +AL +   ME  G     +TYN++I G C++
Sbjct: 415 EEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKK 474

Query: 284 GRMREARRLFR--DIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTY 341
            R+ EA  +F   D++G + N +T+ TLIDG C+   +++A  L   M ++G+ P  +TY
Sbjct: 475 MRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITY 534

Query: 342 NSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKV------ 395
           NSIL   CK+G I+ A  +L  M       D VT  TLIN  CK G T  A+KV      
Sbjct: 535 NSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRI 594

Query: 396 -------------------KN----------RMLEAGLMLDQFTYKALIHGFCKAK-EMD 425
                              +N           M E G   D  TYK +  G C+    + 
Sbjct: 595 KGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIK 654

Query: 426 IAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLD 467
            A + +  M+D GF P + S+  L +G  N   ++  ++ ++
Sbjct: 655 EAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGMDDYFIRAIE 696



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 75/273 (27%), Positives = 132/273 (48%), Gaps = 18/273 (6%)

Query: 261 MEREGISPDIVTYNSLIHGFCREGRMREARRLFRD-----------IKGATPNHVTYTTL 309
           M REG    +   +S +  +       E ++LF D           + G   + V Y  L
Sbjct: 100 MRREGHQVKLGVVHSFLDSY-------EGQQLFDDAVDLILNQLQPLFGIQADTVVYNHL 152

Query: 310 IDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI 369
           ++     + ++    +   M A+G+ P VVT+N++++ LC+  ++R A  +L EM+ + +
Sbjct: 153 LNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGV 212

Query: 370 APDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKE 429
           APD  T  TL+  + + G   +A++VK RMLE G    + T   LI+G+CK   ++ A  
Sbjct: 213 APDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALG 272

Query: 430 LLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFC 489
            +   +  GF P   +Y+  V+G C  ++    LK++D  V  G   DV  Y  ++   C
Sbjct: 273 YIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLC 332

Query: 490 KKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYA 522
           K  +++ A+ + N M   G L D   + +L  A
Sbjct: 333 KNGQLEEAKGILNQMVDRGCLPDITTFNTLIAA 365



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 60/248 (24%), Positives = 112/248 (45%), Gaps = 3/248 (1%)

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
           L L ++    G+    V YN +L  L +  +++    + +EM  + I PD VT NTL+ A
Sbjct: 131 LILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKA 190

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
            C+     +A+ +   M   G+  D+ T+  L+ GF +   ++ A  +   ML+ G S +
Sbjct: 191 LCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSAT 250

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             + + L++GYC     E  L  + + ++ G   D   Y   +   C+ + V +A ++ +
Sbjct: 251 KVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMD 310

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDN 562
           +M   G   D   Y  +     + G+ +    IL+ M  R  +  +  + +  A+    N
Sbjct: 311 VMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGN 370

Query: 563 ---EILDL 567
              E LDL
Sbjct: 371 RLEEALDL 378



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/213 (21%), Positives = 88/213 (41%), Gaps = 3/213 (1%)

Query: 318 DLEEALR-LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTC 376
           D + ALR L   +A     PG   Y  I+RKL   G +     L+ EM  +         
Sbjct: 53  DPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVV 112

Query: 377 NTLINAY--CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGM 434
           ++ +++Y   ++ D A  + +       G+  D   Y  L++   +  +M + + +   M
Sbjct: 113 HSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEM 172

Query: 435 LDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKV 494
              G  P   +++ L+   C  +     + +L+E  SRG+  D + +  L++ F ++  +
Sbjct: 173 GARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSI 232

Query: 495 DYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
           + A R+   M   G     V    L   Y + G
Sbjct: 233 EAALRVKARMLEMGCSATKVTVNVLINGYCKLG 265


>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
          Length = 1512

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 114/375 (30%), Positives = 188/375 (50%), Gaps = 2/375 (0%)

Query: 170  VLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFK 229
            +++++L KD +T     ++ +M+  G++ ++ +Y+ L+   C+   + +  +   EME +
Sbjct: 1090 MIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGR 1149

Query: 230  DVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA 289
             + AD++TYN+LI    + G+  E     + M   G SPD  T+  LI G C+EG++ EA
Sbjct: 1150 GISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEA 1209

Query: 290  RRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRK 347
            +++   +  KG  P+ +TY TL++G C    LE+A +L E +A +G+   V +YN ++  
Sbjct: 1210 QQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILING 1269

Query: 348  LCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLD 407
             CK+ +I +A R   EM  K + P  VT NTLI A C+ G   +A K+   M   G  L 
Sbjct: 1270 YCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLK 1329

Query: 408  QFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLD 467
              TY  L+ G CK   ++ A +L   +      P+   +S L+DG C     E   K  D
Sbjct: 1330 LSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFD 1389

Query: 468  EFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
            E    GL  D   Y  LI   C K  +  A +L   M+  G L DS+ +  +     +  
Sbjct: 1390 EISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKEN 1449

Query: 528  EPKACSDILDDMYRR 542
            E      +L++M  R
Sbjct: 1450 EIHEAIQLLEEMRNR 1464



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 108/361 (29%), Positives = 183/361 (50%), Gaps = 3/361 (0%)

Query: 186  KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
            +++ +M + G++ +   Y +LI+  CK+       KL  +M+  + + D+FTY  +I   
Sbjct: 1037 QLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKMK-GNCKGDVFTYGMIIDAL 1095

Query: 246  CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNH 303
            CK GM  EAL +   M   GI PD+V Y+SL+ G CR GR++EA   F+++  +G + + 
Sbjct: 1096 CKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADV 1155

Query: 304  VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
             TY +LI G  RA   +E      +M  +G  P   T+  ++  LCKEG++ +A ++L  
Sbjct: 1156 YTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILEL 1215

Query: 364  MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
            M  K   PD +T NTL+N  C +G    A K+   + + G+ L+ F+Y  LI+G+CK ++
Sbjct: 1216 MRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQK 1275

Query: 424  MDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRA 483
            +D A      M   G  PS  +Y+ L+   C         KL  E  + G  + +S Y  
Sbjct: 1276 IDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCV 1335

Query: 484  LIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRR 543
            L+   CK   ++ A  LF  ++      +  +++ L     RAG+ +      D++ +  
Sbjct: 1336 LLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNG 1395

Query: 544  L 544
            L
Sbjct: 1396 L 1396



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 123/428 (28%), Positives = 203/428 (47%), Gaps = 6/428 (1%)

Query: 148  DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
            D +++FD+      MP       LL S+AK      V+ +Y+K+  +G+  +++  N+LI
Sbjct: 929  DAIKLFDRSLCSEPMPCTDTFNHLLASVAKLGYYSTVFPMYRKINDVGIQPDLYTLNILI 988

Query: 208  HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLI-ALYCKKGMHYEALAVQDRMEREGI 266
            H CC    V     +      +    D  T  TL+  ++ + G+  +A+ + D M ++G+
Sbjct: 989  HCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLVKGVWMENGIP-DAVQLFDEMTKKGL 1047

Query: 267  SPDIVTYNSLIHGFCREGRMREARRLFRDIKGATPNHV-TYTTLIDGYCRANDLEEALRL 325
              D  TY  LI+G C+  +   A +L   +KG     V TY  +ID  C+     EAL +
Sbjct: 1048 LGDAKTYGILINGLCKARKTGLAIKLHEKMKGNCKGDVFTYGMIIDALCKDGMTTEALDM 1107

Query: 326  REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
               M   G+ P VV Y+S++  LC+ GR+++A     EM  + I+ D  T N+LI+   +
Sbjct: 1108 FSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSR 1167

Query: 386  IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
             G         N M++ G   D FT+  LI G CK  ++  A+++L  M   G  P   +
Sbjct: 1168 AGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILT 1227

Query: 446  YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
            Y+ L++G C     E   KL +    RG+ ++V  Y  LI  +CK +K+D A R F  M+
Sbjct: 1228 YNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMR 1287

Query: 506  GNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDN--- 562
              G+   +V Y +L  A  ++G  +    +  +M      + L  Y        K+    
Sbjct: 1288 PKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLE 1347

Query: 563  EILDLFWS 570
            E +DLF S
Sbjct: 1348 EAMDLFQS 1355



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 114/406 (28%), Positives = 199/406 (49%), Gaps = 6/406 (1%)

Query: 120  VKIHDDPDGN--SHVLSWLVIFYANLK--MTQDGLQVFDQMRVHNLMPHLHACTVLLNSL 175
            +K+H+   GN    V ++ +I  A  K  MT + L +F +M    ++P +   + L++ L
Sbjct: 1071 IKLHEKMKGNCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGL 1130

Query: 176  AKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADL 235
             +        + +K+M   G+ A+++ YN LIH   ++    +V   L  M  +    D 
Sbjct: 1131 CRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDA 1190

Query: 236  FTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD 295
            FT+  LI   CK+G   EA  + + M  +G  PDI+TYN+L++G C  G++ +A +LF  
Sbjct: 1191 FTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFES 1250

Query: 296  I--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGR 353
            +  +G   N  +Y  LI+GYC+   ++EA R  E M  KG+ P  VTYN+++  LC+ GR
Sbjct: 1251 LADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGR 1310

Query: 354  IRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKA 413
            +R A +L  EM          T   L++  CK G    AM +   + +     +   +  
Sbjct: 1311 VRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSI 1370

Query: 414  LIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
            L+ G C+A +++ A +    +   G  P   +Y+ L++G CNK      +KLL +   +G
Sbjct: 1371 LLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKG 1430

Query: 474  LCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
               D   +  +I+   K+ ++  A +L   M+      D  + + L
Sbjct: 1431 CLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSML 1476



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 64/273 (23%), Positives = 120/273 (43%), Gaps = 20/273 (7%)

Query: 84   MIHILTKNKHFKSAQNMLE----KIALRDFLSTPSVLNALVKIHDDPDGNS--------- 130
            +I  L K      AQ +LE    K    D L+  +++N L  +    D            
Sbjct: 1196 LIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRG 1255

Query: 131  ---HVLSW--LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVW 185
               +V S+  L+  Y   +   +  + F++MR   L P       L+ +L +        
Sbjct: 1256 IKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQ 1315

Query: 186  KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
            K++ +M   G    +  Y VL+   CK+  +++   L   ++  + + ++  ++ L+   
Sbjct: 1316 KLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGM 1375

Query: 246  CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNH 303
            C+ G   EA    D + + G+ PD + YN LI+G C +G + EA +L   +  KG  P+ 
Sbjct: 1376 CRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDS 1435

Query: 304  VTYTTLIDGYCRANDLEEALRLREVMAAKGVYP 336
            +T+  +I    + N++ EA++L E M  +   P
Sbjct: 1436 ITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSP 1468



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 63/259 (24%), Positives = 102/259 (39%), Gaps = 36/259 (13%)

Query: 319  LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT 378
            L +A++L +        P   T+N +L  + K G       +  ++N+  I PD  T N 
Sbjct: 927  LNDAIKLFDRSLCSEPMPCTDTFNHLLASVAKLGYYSTVFPMYRKINDVGIQPDLYTLNI 986

Query: 379  LINAYCKI-----------------------------------GDTASAMKVKNRMLEAG 403
            LI+  C +                                        A+++ + M + G
Sbjct: 987  LIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKG 1046

Query: 404  LMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALL 463
            L+ D  TY  LI+G CKA++  +A +L   M          +Y  ++D  C        L
Sbjct: 1047 LLGDAKTYGILINGLCKARKTGLAIKLHEKM-KGNCKGDVFTYGMIIDALCKDGMTTEAL 1105

Query: 464  KLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAY 523
             +  E +  G+  DV VY +L+   C+  ++  A   F  M+G GI  D   Y SL +  
Sbjct: 1106 DMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGL 1165

Query: 524  WRAGEPKACSDILDDMYRR 542
             RAG  K  +  L+ M  R
Sbjct: 1166 SRAGLWKEVTWFLNLMVDR 1184



 Score = 72.0 bits (175), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 67/283 (23%), Positives = 109/283 (38%), Gaps = 38/283 (13%)

Query: 333  GVYPGVVTYNSILRKLCKEGRIR--DANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTA 390
            G    +  +   +R  C+ G I+  DA +L +     +  P   T N L+ +  K+G  +
Sbjct: 904  GTKASLSPFERYVRDQCRFGIIKLNDAIKLFDRSLCSEPMPCTDTFNHLLASVAKLGYYS 963

Query: 391  SAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLV 450
            +   +  ++ + G+  D +T   LIH  C  + +     +  G L  GF P   + + LV
Sbjct: 964  TVFPMYRKINDVGIQPDLYTLNILIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLV 1023

Query: 451  DGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGN--- 507
             G   +N     ++L DE   +GL  D   Y  LI   CK  K   A +L   M+GN   
Sbjct: 1024 KGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKMKGNCKG 1083

Query: 508  -------------------------------GILGDSVIYTSLAYAYWRAGEPKACSDIL 536
                                           GIL D V+Y+SL     R G  K   +  
Sbjct: 1084 DVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFF 1143

Query: 537  DDMYRRRLMITLKIYRSFSASYAKDNEILDLFW--SHVVDRGL 577
             +M  R +   +  Y S     ++     ++ W  + +VDRG 
Sbjct: 1144 KEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGF 1186



 Score = 38.9 bits (89), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 35/167 (20%), Positives = 69/167 (41%), Gaps = 17/167 (10%)

Query: 78   LQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLV 137
            L ++  ++  L KN H + A ++ + I                K    P  N  V S L+
Sbjct: 1330 LSTYCVLLDGLCKNGHLEEAMDLFQSIK---------------KTEHKP--NIEVFSILL 1372

Query: 138  IFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVV 197
                     ++  + FD++  + L P   A  +L+N L    +     K+  +M + G +
Sbjct: 1373 DGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCL 1432

Query: 198  ANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIAL 244
             +   +NV+I    K +++ +  +LL EM  ++   D    + L+ L
Sbjct: 1433 PDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLLCL 1479


>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g61990, mitochondrial; Flags: Precursor
 gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 974

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 121/402 (30%), Positives = 197/402 (49%), Gaps = 20/402 (4%)

Query: 155 QMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSS 214
           +MR   ++P+   CT L+N   K          Y+ MV  G++ +   Y VL++   K+ 
Sbjct: 547 EMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKND 606

Query: 215 DVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYN 274
            VD  E++  EM  K +  D+F+Y  LI  + K G   +A ++ D M  EG++P+++ YN
Sbjct: 607 KVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYN 666

Query: 275 SLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAK 332
            L+ GFCR G + +A+ L  +  +KG  PN VTY T+IDGYC++ DL EA RL + M  K
Sbjct: 667 MLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLK 726

Query: 333 GVYPGVVTYNSILRKLCKEGRIRDANRLLN--EMNEKKIAPDNVTCNTLINAYCKIGDTA 390
           G+ P    Y +++   C   R+ D  R +     N+K  A      N LIN   K G T 
Sbjct: 727 GLVPDSFVYTTLVDGCC---RLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTE 783

Query: 391 SAMKVKNRMLEAGLMLDQF------TYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
              +V NR+++     D+F      TY  +I   CK   ++ AKEL   M +A   P+  
Sbjct: 784 LKTEVLNRLMDGSF--DRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVI 841

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
           +Y+ L++GY        +  + DE ++ G+  D  +Y  +I  F K+     A  L + M
Sbjct: 842 TYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQM 901

Query: 505 QGNGILGDSVIYT-----SLAYAYWRAGEPKACSDILDDMYR 541
                + D    +     +L   + + GE +    ++++M R
Sbjct: 902 FAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVR 943



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 124/420 (29%), Positives = 195/420 (46%), Gaps = 3/420 (0%)

Query: 148 DG-LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           DG L++ + M    L+P  +   VL++ L K +  +    +  +M  LGV  + H Y++L
Sbjct: 259 DGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLL 318

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           I    K  + D  + L+ EM    +    + Y+  I +  K+G+  +A A+ D M   G+
Sbjct: 319 IDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGL 378

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALR 324
            P    Y SLI G+CRE  +R+   L  ++K      +  TY T++ G C + DL+ A  
Sbjct: 379 IPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYN 438

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           + + M A G  P VV Y ++++   +  R  DA R+L EM E+ IAPD    N+LI    
Sbjct: 439 IVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLS 498

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           K      A      M+E GL  + FTY A I G+ +A E   A + +  M + G  P+  
Sbjct: 499 KAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKV 558

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
             + L++ YC K             V +G+  D   Y  L+    K +KVD A+ +F  M
Sbjct: 559 LCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREM 618

Query: 505 QGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
           +G GI  D   Y  L   + + G  +  S I D+M    L   + IY      + +  EI
Sbjct: 619 RGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEI 678



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 104/407 (25%), Positives = 197/407 (48%), Gaps = 4/407 (0%)

Query: 160 NLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKV 219
           N+ P+++ C + +  ++K+ + +    ++  M+  G++     Y  LI   C+  +V + 
Sbjct: 344 NIKPYMYDCCICV--MSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQG 401

Query: 220 EKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHG 279
            +LL EM+ +++    +TY T++   C  G    A  +   M   G  P++V Y +LI  
Sbjct: 402 YELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKT 461

Query: 280 FCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPG 337
           F +  R  +A R+ +++K  G  P+   Y +LI G  +A  ++EA      M   G+ P 
Sbjct: 462 FLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPN 521

Query: 338 VVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKN 397
             TY + +    +      A++ + EM E  + P+ V C  LIN YCK G    A     
Sbjct: 522 AFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYR 581

Query: 398 RMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKN 457
            M++ G++ D  TY  L++G  K  ++D A+E+   M   G +P   SY  L++G+    
Sbjct: 582 SMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLG 641

Query: 458 NEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYT 517
           N +    + DE V  GL  +V +Y  L+  FC+  +++ A+ L + M   G+  ++V Y 
Sbjct: 642 NMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYC 701

Query: 518 SLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
           ++   Y ++G+      + D+M  + L+    +Y +      + N++
Sbjct: 702 TIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDV 748



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 128/491 (26%), Positives = 221/491 (45%), Gaps = 57/491 (11%)

Query: 145 MTQDGLQ-----VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
           M+++G+      +FD M    L+P   A   L+    +++     +++  +M +  +V +
Sbjct: 357 MSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVIS 416

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
            + Y  ++   C S D+D    ++ EM     R ++  Y TLI  + +     +A+ V  
Sbjct: 417 PYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLK 476

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRAN 317
            M+ +GI+PDI  YNSLI G  +  RM EAR    ++   G  PN  TY   I GY  A+
Sbjct: 477 EMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEAS 536

Query: 318 DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRI----------------------- 354
           +   A +  + M   GV P  V    ++ + CK+G++                       
Sbjct: 537 EFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYT 596

Query: 355 ------------RDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEA 402
                        DA  +  EM  K IAPD  +   LIN + K+G+   A  + + M+E 
Sbjct: 597 VLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEE 656

Query: 403 GLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEAL 462
           GL  +   Y  L+ GFC++ E++ AKELL  M   G  P+  +Y  ++DGYC   +    
Sbjct: 657 GLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEA 716

Query: 463 LKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYA 522
            +L DE   +GL  D  VY  L+   C+   V+ A  +F   +  G    +  + +L   
Sbjct: 717 FRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNK-KGCASSTAPFNALINW 775

Query: 523 YWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEIL-DLFWSHVVDRGLM--S 579
            ++ G+ +  +++L+     RLM       SF   + K N++  ++   ++   G +  +
Sbjct: 776 VFKFGKTELKTEVLN-----RLMDG-----SFD-RFGKPNDVTYNIMIDYLCKEGNLEAA 824

Query: 580 KHIFKEMQLRN 590
           K +F +MQ  N
Sbjct: 825 KELFHQMQNAN 835



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 99/357 (27%), Positives = 168/357 (47%), Gaps = 45/357 (12%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D  ++F +MR   + P + +  VL+N  +K         ++ +MV+ G+  N+ +YN+L+
Sbjct: 610 DAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLL 669

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
              C+S +++K ++LL EM  K +  +  TY T+I  YCK G   EA  + D M+ +G+ 
Sbjct: 670 GGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLV 729

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDIK--------------------GAT------- 300
           PD   Y +L+ G CR   +  A  +F   K                    G T       
Sbjct: 730 PDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVL 789

Query: 301 -------------PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRK 347
                        PN VTY  +ID  C+  +LE A  L   M    + P V+TY S+L  
Sbjct: 790 NRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNG 849

Query: 348 LCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRM-----LEA 402
             K GR  +   + +E     I PD++  + +INA+ K G T  A+ + ++M     ++ 
Sbjct: 850 YDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDD 909

Query: 403 GLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNE 459
           G  L   T +AL+ GF K  EM++A++++  M+   + P   +   L++  C  +N+
Sbjct: 910 GCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCISSNQ 966



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 87/312 (27%), Positives = 143/312 (45%), Gaps = 16/312 (5%)

Query: 269 DIVTYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTL-IDGYCRANDLEEALRLRE 327
           D+ TY+ LI   CR G ++    L +D+   T       TL +DG         AL+L+E
Sbjct: 220 DVKTYHMLIIAHCRAGNVQ----LGKDVLFKTEKEFRTATLNVDG---------ALKLKE 266

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
            M  KG+ P   TY+ ++  LCK  R+ DA  LL EM+   ++ DN T + LI+   K  
Sbjct: 267 SMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGR 326

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
           +  +A  + + M+  G+ +  + Y   I    K   M+ AK L  GM+ +G  P   +Y+
Sbjct: 327 NADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYA 386

Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGN 507
            L++GYC + N     +LL E   R + +    Y  +++  C    +D A  +   M  +
Sbjct: 387 SLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIAS 446

Query: 508 GILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSF--SASYAKDNEIL 565
           G   + VIYT+L   + +         +L +M  + +   +  Y S     S AK  +  
Sbjct: 447 GCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEA 506

Query: 566 DLFWSHVVDRGL 577
             F   +V+ GL
Sbjct: 507 RSFLVEMVENGL 518


>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
 gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
          Length = 559

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 121/415 (29%), Positives = 210/415 (50%), Gaps = 4/415 (0%)

Query: 144 KMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLY 203
           K  +  + +  +M   +  P+     +L++ L K+   +   ++  +M + G+  ++ +Y
Sbjct: 24  KRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRLLGEMKRKGLEVDVVVY 83

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER 263
           + LI   C    +D+ + L  EM  K +  ++  Y+ LI  +CKKG+  EA AV   M  
Sbjct: 84  STLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCKKGLWREATAVLHTMTE 143

Query: 264 EGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEE 321
            GI PD+ TY  +I G C++GR R+A  LF  +  KG  P+ VTY  LI+G C+   + +
Sbjct: 144 RGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGD 203

Query: 322 ALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKK--IAPDNVTCNTL 379
           A ++ E M  KG    VV+YN+++  LC  G++ +A +L + + E    + PD +T NT+
Sbjct: 204 AFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTV 263

Query: 380 INAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGF 439
           I   CK G    A+++ + M+E G   + FT   LI  + K+  +D A EL   +   G 
Sbjct: 264 IQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGL 323

Query: 440 SPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQR 499
            PS  +YS ++DG+C  +       L       GL   +  Y  L+   CK+  ++ A+R
Sbjct: 324 VPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARR 383

Query: 500 LFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSF 554
           LF  M+ +    D++ +  +     +AG+  +  ++L+DM +  L      Y SF
Sbjct: 384 LFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSF 438



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 104/400 (26%), Positives = 180/400 (45%), Gaps = 39/400 (9%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N  V S L+  +    + ++   V   M    + P ++  T ++  L KD        ++
Sbjct: 114 NVVVYSCLINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLF 173

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
             M + G   +   YNVLI+  CK   +    K+   M  K  R ++ +YNTLI   C  
Sbjct: 174 DLMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNN 233

Query: 249 GMHYEALAVQDRMEREG--ISPDIVTYNSLIHGFCREGRMREARRLFRDI---------- 296
           G   EA+ +   +  +G  + PD++T+N++I G C+EGR+ +A  ++  +          
Sbjct: 234 GKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLF 293

Query: 297 ---------------------------KGATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
                                       G  P+  TY+ +IDG+C+ + L  A  L   M
Sbjct: 294 TCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRM 353

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
              G+ P +  YN+++  LCKE  +  A RL  EM E    PD ++ N +I+   K GD 
Sbjct: 354 KISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDI 413

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
            SA ++ N M + GL  D +TY + I+   K  +M+ AK     M+ +G +P    Y  L
Sbjct: 414 HSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSL 473

Query: 450 VDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFC 489
           + G+   +  E ++ LL +    G+ +D+ +  +++   C
Sbjct: 474 IKGFGLNDEIEEVINLLRQMADMGVILDLEITNSILTFLC 513



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 95/286 (33%), Positives = 151/286 (52%), Gaps = 4/286 (1%)

Query: 261 MEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGAT--PNHVTYTTLIDGYCRAND 318
           M+R  I PDIV+YN++I+G C+E R+ +A  L  +++G++  PN  TY  L+DG C+   
Sbjct: 1   MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60

Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT 378
           +EEA+RL   M  KG+   VV Y++++   C +G +     L +EM EK I+P+ V  + 
Sbjct: 61  VEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSC 120

Query: 379 LINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAG 438
           LIN +CK G    A  V + M E G+  D +TY  +I G CK      A +L   M + G
Sbjct: 121 LINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKG 180

Query: 439 FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQ 498
             PS  +Y+ L++G C +       K+ +  + +G  ++V  Y  LI   C   K+D A 
Sbjct: 181 EEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAM 240

Query: 499 RLFN--LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRR 542
           +LF+  L  GN +  D + + ++     + G      +I D M  R
Sbjct: 241 KLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIER 286



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 109/427 (25%), Positives = 199/427 (46%), Gaps = 4/427 (0%)

Query: 132 VLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKM 191
           V S L+  + +      G  +FD+M    + P++   + L+N   K  L      V   M
Sbjct: 82  VYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCKKGLWREATAVLHTM 141

Query: 192 VQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMH 251
            + G+  +++ Y  +I   CK     K   L   M  K       TYN LI   CK+G  
Sbjct: 142 TERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCI 201

Query: 252 YEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF----RDIKGATPNHVTYT 307
            +A  + + M  +G   ++V+YN+LI G C  G++ EA +LF     D     P+ +T+ 
Sbjct: 202 GDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFN 261

Query: 308 TLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEK 367
           T+I G C+   L++A+ + + M  +G +  + T + ++ +  K G I  A  L   +++ 
Sbjct: 262 TVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKL 321

Query: 368 KIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIA 427
            + P + T + +I+ +CK+     A  + +RM  +GL    F Y  L+   CK   ++ A
Sbjct: 322 GLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQA 381

Query: 428 KELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRR 487
           + L   M ++   P   S++ ++DG     +  +  +LL++    GL  D   Y + I R
Sbjct: 382 RRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINR 441

Query: 488 FCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMIT 547
             K  +++ A+  F+ M  +GI  D+ +Y SL   +    E +   ++L  M    +++ 
Sbjct: 442 LSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQMADMGVILD 501

Query: 548 LKIYRSF 554
           L+I  S 
Sbjct: 502 LEITNSI 508



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 72/271 (26%), Positives = 132/271 (48%), Gaps = 2/271 (0%)

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
           P +     ++  L K+   D   ++Y  M++ G   N+   ++LI    KS  +DK  +L
Sbjct: 255 PDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMEL 314

Query: 223 LCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR 282
              +    +     TY+ +I  +CK  M   A  +  RM+  G+SP +  YN+L+   C+
Sbjct: 315 WKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCK 374

Query: 283 EGRMREARRLFRDIKGAT--PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVT 340
           E  + +ARRLF+++K +   P+ +++  +IDG  +A D+  A  L   M   G+ P   T
Sbjct: 375 ESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYT 434

Query: 341 YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML 400
           Y+S + +L K G++ +A    + M    I PDN   ++LI  +    +    + +  +M 
Sbjct: 435 YSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQMA 494

Query: 401 EAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
           + G++LD     +++   C + E     ELL
Sbjct: 495 DMGVILDLEITNSILTFLCNSAEHLHVMELL 525



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 61/228 (26%), Positives = 113/228 (49%), Gaps = 4/228 (1%)

Query: 157 RVH--NLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSS 214
           RVH   L+P     +V+++   K  + +    ++ +M   G+   +  YN L+ + CK S
Sbjct: 317 RVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKES 376

Query: 215 DVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYN 274
            +++  +L  EM+  +   D  ++N +I    K G  + A  + + M++ G++PD  TY+
Sbjct: 377 SLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYS 436

Query: 275 SLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAK 332
           S I+   + G+M EA+  F  +   G TP++  Y +LI G+   +++EE + L   MA  
Sbjct: 437 SFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQMADM 496

Query: 333 GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLI 380
           GV   +   NSIL  LC          LL   + +     +++C+ L+
Sbjct: 497 GVILDLEITNSILTFLCNSAEHLHVMELLPNFSSESSGGTSISCDKLL 544


>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
 gi|194702156|gb|ACF85162.1| unknown [Zea mays]
 gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
          Length = 567

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 116/404 (28%), Positives = 201/404 (49%), Gaps = 6/404 (1%)

Query: 191 MVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGM 250
           +  + V  + + YN LI   C          +L +M  +    D+ TY  L+   CK+  
Sbjct: 157 VADMPVEPDAYTYNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSG 216

Query: 251 HYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTT 308
           + +A+ + D M  +G +PDIVTYN +++G C+EGR+ +A    +++   G  PN V+Y  
Sbjct: 217 YKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNI 276

Query: 309 LIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKK 368
           ++ G   A   E+A +L E MA KG  P VVT+N ++  LC+ G +  A  +L +M +  
Sbjct: 277 VLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYG 336

Query: 369 IAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAK 428
             P++++ N L++A+CK      AM+    M+  G   D  +Y  L+   C+  E+D+A 
Sbjct: 337 CTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAI 396

Query: 429 ELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRF 488
           ELL  + D G SP   SY+ ++DG       +  L+LLDE  S+GL  D+  Y  +    
Sbjct: 397 ELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGL 456

Query: 489 CKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITL 548
           C++++++ A R F  +Q  GI   + +Y ++     +  E     D+   M     M   
Sbjct: 457 CREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNE 516

Query: 549 KIYRSFSASYAKDN---EILDLFWSHVVDRGLMSKHIFKEMQLR 589
             Y       A +    E  +LF + +  RG+++K + K+  ++
Sbjct: 517 STYTILVEGLAYEGLVKEARELF-AQLCSRGVVNKKLMKKGSIK 559



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 88/347 (25%), Positives = 181/347 (52%), Gaps = 4/347 (1%)

Query: 132 VLSWLVIFYANLKMT--QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYK 189
           V+++ ++  A  K +  +  +++ D+M      P +    V+LN + ++   +   +  K
Sbjct: 201 VVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLK 260

Query: 190 KMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKG 249
            +   G   N   YN+++     +   +  EKL+ EM  K    ++ T+N LI+  C++G
Sbjct: 261 NLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRG 320

Query: 250 MHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYT 307
           +   A+ V ++M + G +P+ ++YN L+H FC++ ++ +A      +  +G  P+ V+Y 
Sbjct: 321 LVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYN 380

Query: 308 TLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEK 367
           TL+   CR  +++ A+ L   +  KG  P +++YN+++  L K G+ ++A  LL+EM  K
Sbjct: 381 TLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSK 440

Query: 368 KIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIA 427
            + PD +T +T+ +  C+      A++   ++ + G+      Y A++ G CK +E   A
Sbjct: 441 GLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNA 500

Query: 428 KELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGL 474
            +L   M+ +G  P+  +Y+ LV+G   +   +   +L  +  SRG+
Sbjct: 501 IDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEARELFAQLCSRGV 547



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 103/382 (26%), Positives = 174/382 (45%), Gaps = 2/382 (0%)

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
           P  +    L+  L     T     V + M + G + ++  Y +L+ A CK S   +  KL
Sbjct: 164 PDAYTYNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKL 223

Query: 223 LCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR 282
           L EM  K    D+ TYN ++   C++G   +A+     +   G  P+ V+YN ++ G   
Sbjct: 224 LDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFT 283

Query: 283 EGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVT 340
             R  +A +L  ++  KG  PN VT+  LI   CR   +E A+ + E M   G  P  ++
Sbjct: 284 AERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLS 343

Query: 341 YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML 400
           YN +L   CK+ +I  A   +  M  +   PD V+ NTL+ A C+ G+   A+++ +++ 
Sbjct: 344 YNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLK 403

Query: 401 EAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEE 460
           + G      +Y  +I G  KA +   A ELL  M   G  P   +YS +  G C ++  E
Sbjct: 404 DKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIE 463

Query: 461 ALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLA 520
             ++   +    G+    ++Y A++   CK+ +   A  LF  M  +G + +   YT L 
Sbjct: 464 EAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILV 523

Query: 521 YAYWRAGEPKACSDILDDMYRR 542
                 G  K   ++   +  R
Sbjct: 524 EGLAYEGLVKEARELFAQLCSR 545



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 92/367 (25%), Positives = 171/367 (46%), Gaps = 2/367 (0%)

Query: 146 TQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNV 205
           T + L V + M     +P +   T+LL +  K        K+  +M   G   +I  YNV
Sbjct: 182 TSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNV 241

Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
           +++  C+   V+   + L  +       +  +YN ++          +A  + + M  +G
Sbjct: 242 VLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKG 301

Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEAL 323
             P++VT+N LI   CR G +  A  +   +   G TPN ++Y  L+  +C+   + +A+
Sbjct: 302 CPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAM 361

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
              E+M ++G YP +V+YN++L  LC+ G +  A  LL+++ +K  +P  ++ NT+I+  
Sbjct: 362 EFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGL 421

Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY 443
            K G T  A+++ + M   GL  D  TY  +  G C+   ++ A      + D G  P+ 
Sbjct: 422 TKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTA 481

Query: 444 CSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNL 503
             Y+ ++ G C +      + L    +S G   + S Y  L+     +  V  A+ LF  
Sbjct: 482 ALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEARELFAQ 541

Query: 504 MQGNGIL 510
           +   G++
Sbjct: 542 LCSRGVV 548



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 79/290 (27%), Positives = 136/290 (46%), Gaps = 6/290 (2%)

Query: 275 SLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGV 334
           +LI   C  GR  +ARR+   +  + P+ + Y  ++ GYC A  L+ A RL   +A   V
Sbjct: 109 ALIKKLCASGRTADARRV---LAASGPDVMVYNAMVAGYCGAGQLDAARRL---VADMPV 162

Query: 335 YPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMK 394
            P   TYN+++R LC  GR  +A  +L +M  +   PD VT   L+ A CK      AMK
Sbjct: 163 EPDAYTYNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMK 222

Query: 395 VKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYC 454
           + + M + G   D  TY  +++G C+   ++ A E L  +   G  P+  SY+ ++ G  
Sbjct: 223 LLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLF 282

Query: 455 NKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSV 514
                E   KL++E   +G   +V  +  LI   C++  V+ A  +   M   G   +S+
Sbjct: 283 TAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSL 342

Query: 515 IYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
            Y  L +A+ +  +     + ++ M  R     +  Y +   +  ++ E+
Sbjct: 343 SYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEV 392



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 69/249 (27%), Positives = 120/249 (48%), Gaps = 2/249 (0%)

Query: 123 HDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTD 182
           H     N    + L+ F     + +  ++V +QM  +   P+  +   LL++  K +   
Sbjct: 299 HKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIH 358

Query: 183 MVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLI 242
              +  + MV  G   +I  YN L+ A C++ +VD   +LL +++ K     L +YNT+I
Sbjct: 359 KAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVI 418

Query: 243 ALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GAT 300
               K G   EAL + D M  +G+ PDI+TY+++  G CRE R+ EA R F  ++  G  
Sbjct: 419 DGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIR 478

Query: 301 PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRL 360
           P    Y  ++ G C+  +   A+ L   M + G  P   TY  ++  L  EG +++A  L
Sbjct: 479 PTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEAREL 538

Query: 361 LNEMNEKKI 369
             ++  + +
Sbjct: 539 FAQLCSRGV 547



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 72/271 (26%), Positives = 132/271 (48%), Gaps = 2/271 (0%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           +D  ++ ++M      P++    +L++ L +  L +   +V ++M Q G   N   YN L
Sbjct: 288 EDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPL 347

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           +HA CK   + K  + +  M  +    D+ +YNTL+   C+ G    A+ +  +++ +G 
Sbjct: 348 LHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGC 407

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
           SP +++YN++I G  + G+ +EA  L  ++  KG  P+ +TY+T+  G CR + +EEA+R
Sbjct: 408 SPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVR 467

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
               +   G+ P    YN+IL  LCK     +A  L   M      P+  T   L+    
Sbjct: 468 TFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLA 527

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALI 415
             G    A ++  ++   G++  +   K  I
Sbjct: 528 YEGLVKEARELFAQLCSRGVVNKKLMKKGSI 558


>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 545

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 109/367 (29%), Positives = 207/367 (56%), Gaps = 2/367 (0%)

Query: 146 TQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNV 205
           T+  +Q+  ++    + P++   + +++S+ KD+L +  + +Y +MV   +  ++  Y+ 
Sbjct: 179 TKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSS 238

Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
           LI   C    +     L   M   ++  +++T++ LI  +CK+G   EA  V   M ++ 
Sbjct: 239 LISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKN 298

Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEAL 323
           +  D+VTYNSL+ G+C   ++ +A+ LF  +  +G TP+  +Y+ +I+G+C+   ++EA+
Sbjct: 299 VKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAM 358

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
           +L E M  K ++P VVTYNS++  LCK GR   A  L++EM+++    + +T N++++A 
Sbjct: 359 KLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAI 418

Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY 443
           CK      A+ +  ++ E G+  D FTY  LI+G CK   +D A+++   +L  G+SP+ 
Sbjct: 419 CKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNI 478

Query: 444 CSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNL 503
            +Y+ L++G+CNK   +  L +L +    G   +   Y  LI    +K++ D A++L   
Sbjct: 479 YTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKDENDKAEKLLRE 538

Query: 504 MQGNGIL 510
           M   G+L
Sbjct: 539 MIARGLL 545



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 111/377 (29%), Positives = 203/377 (53%), Gaps = 2/377 (0%)

Query: 171 LLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKD 230
           L+N L +   T    ++ +++    V  N+ +Y+ +I + CK   V+    L CEM  K 
Sbjct: 169 LINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKR 228

Query: 231 VRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREAR 290
           +  D+ TY++LI+ +C  G    A+ + +RM  + I+P++ T++ LI GFC+EG++REA+
Sbjct: 229 ISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAK 288

Query: 291 RLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
            +   +  K    + VTY +L+DGYC    + +A  L  VMA +GV P V +Y+ ++   
Sbjct: 289 NVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGF 348

Query: 349 CKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ 408
           CK   + +A +L  EM+ K+I P+ VT N+L++  CK G T+ A+++ + M + G   + 
Sbjct: 349 CKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNI 408

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
            TY +++   CK   +D A  LL  + + G  P   +Y+ L++G C     +   K+ ++
Sbjct: 409 ITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFED 468

Query: 469 FVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
            + +G   ++  Y +LI  FC K   D    + + M+ NG + +++ Y  L ++ +   E
Sbjct: 469 LLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKDE 528

Query: 529 PKACSDILDDMYRRRLM 545
                 +L +M  R L+
Sbjct: 529 NDKAEKLLREMIARGLL 545



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 109/398 (27%), Positives = 197/398 (49%), Gaps = 2/398 (0%)

Query: 144 KMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLY 203
           K  Q  L +  QM  + + P    C +L+N  ++       + V+ K+++ G   +   +
Sbjct: 72  KQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSVFAKILKKGYHPDAVTF 131

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER 263
            +LI   C   +V K      ++  +  + D  +Y TLI   C+ G    A+ +  R++ 
Sbjct: 132 TILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCRVGETKAAVQLLRRVDG 191

Query: 264 EGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEE 321
           + + P++V Y+++I   C++  + +A  L+ ++  K  +P+ VTY++LI G+C    L+ 
Sbjct: 192 KLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKY 251

Query: 322 ALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
           A+ L   M +  + P V T++ ++   CKEG++R+A  +L  M +K +  D VT N+L++
Sbjct: 252 AVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMD 311

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
            YC +     A  + N M + G+  D ++Y  +I+GFCK K +D A +L   M      P
Sbjct: 312 GYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFP 371

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
           +  +Y+ LVDG C        L+L+DE   RG   ++  Y +++   CK   VD A  L 
Sbjct: 372 NVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLL 431

Query: 502 NLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
             ++  GI  D   YT L     + G       + +D+
Sbjct: 432 TKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDL 469



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 105/342 (30%), Positives = 175/342 (51%), Gaps = 2/342 (0%)

Query: 225 EMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREG 284
           +MEF  ++ D  T N L+  + + G    + +V  ++ ++G  PD VT+  LI G C +G
Sbjct: 83  QMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKG 142

Query: 285 RMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYN 342
            + +A      +  +G   + V+Y TLI+G CR  + + A++L   +  K V P VV Y+
Sbjct: 143 EVHKALYFHDKVVAQGFQLDQVSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYS 202

Query: 343 SILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEA 402
           +I+  +CK+  + DA  L  EM  K+I+PD VT ++LI+ +C +G    A+ + NRM+  
Sbjct: 203 TIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISD 262

Query: 403 GLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEAL 462
            +  + +T+  LI GFCK  ++  AK +L  M+         +Y+ L+DGYC        
Sbjct: 263 NINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKA 322

Query: 463 LKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYA 522
             L +    RG+  DV  Y  +I  FCK + VD A +LF  M    I  + V Y SL   
Sbjct: 323 KSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDG 382

Query: 523 YWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
             ++G      +++D+M+ R     +  Y S   +  K+N +
Sbjct: 383 LCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHV 424



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 121/227 (53%), Gaps = 2/227 (0%)

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
           Y  +K       +F+ M    + P + + ++++N   K ++ D   K++++M    +  N
Sbjct: 313 YCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPN 372

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
           +  YN L+   CKS       +L+ EM  +   +++ TYN+++   CK     +A+ +  
Sbjct: 373 VVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLT 432

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRAN 317
           +++ +GI PDI TY  LI+G C+ GR+ +A+++F D  +KG +PN  TYT+LI+G+C   
Sbjct: 433 KIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKG 492

Query: 318 DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM 364
             +E L +   M   G  P  +TY  ++  L ++     A +LL EM
Sbjct: 493 FFDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKDENDKAEKLLREM 539



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 77/286 (26%), Positives = 138/286 (48%), Gaps = 2/286 (0%)

Query: 122 IHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLT 181
           I D+ + N +  S L+  +      ++   V   M   N+   +     L++     +  
Sbjct: 260 ISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQV 319

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
           +    ++  M Q GV  ++  Y+++I+  CK   VD+  KL  EM  K +  ++ TYN+L
Sbjct: 320 NKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSL 379

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGA 299
           +   CK G    AL + D M   G   +I+TYNS++   C+   + +A  L   I  KG 
Sbjct: 380 VDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGI 439

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
            P+  TYT LI+G C+   L++A ++ E +  KG  P + TY S++   C +G   +   
Sbjct: 440 QPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLA 499

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLM 405
           +L++M +    P+ +T   LI++  +  +   A K+   M+  GL+
Sbjct: 500 MLSKMKDNGCIPNAITYEILIHSLFEKDENDKAEKLLREMIARGLL 545



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 68/223 (30%), Positives = 118/223 (52%), Gaps = 4/223 (1%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           S+ N + +    PD  S+  S ++  +  +KM  + +++F++M    + P++     L++
Sbjct: 324 SLFNVMAQRGVTPDVWSY--SIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVD 381

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
            L K   T    ++  +M   G  +NI  YN ++ A CK++ VDK   LL +++ K ++ 
Sbjct: 382 GLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQP 441

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           D+FTY  LI   CK G   +A  V + +  +G SP+I TY SLI+GFC +G   E   + 
Sbjct: 442 DIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAML 501

Query: 294 RDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGV 334
             +K  G  PN +TY  LI      ++ ++A +L   M A+G+
Sbjct: 502 SKMKDNGCIPNAITYEILIHSLFEKDENDKAEKLLREMIARGL 544



 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 66/258 (25%), Positives = 117/258 (45%)

Query: 301 PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRL 360
           P  + +  ++    +A   + AL L + M   G+ P  +T N ++    + G I+ +  +
Sbjct: 56  PPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSV 115

Query: 361 LNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCK 420
             ++ +K   PD VT   LI   C  G+   A+   ++++  G  LDQ +Y  LI+G C+
Sbjct: 116 FAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCR 175

Query: 421 AKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSV 480
             E   A +LL  +      P+   YS ++D  C          L  E VS+ +  DV  
Sbjct: 176 VGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVT 235

Query: 481 YRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMY 540
           Y +LI  FC   K+ YA  LFN M  + I  +   ++ L   + + G+ +   ++L  M 
Sbjct: 236 YSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMM 295

Query: 541 RRRLMITLKIYRSFSASY 558
           ++ + + +  Y S    Y
Sbjct: 296 KKNVKLDVVTYNSLMDGY 313



 Score = 42.0 bits (97), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 37/168 (22%), Positives = 68/168 (40%), Gaps = 3/168 (1%)

Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFV 470
           +  ++    KAK+   A  L   M   G  P + + + L++ +    + +    +  + +
Sbjct: 61  FGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSVFAKIL 120

Query: 471 SRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPK 530
            +G   D   +  LI+  C K +V  A    + +   G   D V Y +L     R GE K
Sbjct: 121 KKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCRVGETK 180

Query: 531 ACSDILDDMYRRRLMITLKIYRSFSASYAKD---NEILDLFWSHVVDR 575
           A   +L  +  + +   + +Y +   S  KD   N+  DL+   V  R
Sbjct: 181 AAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKR 228


>gi|147772266|emb|CAN67349.1| hypothetical protein VITISV_018089 [Vitis vinifera]
          Length = 483

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 106/344 (30%), Positives = 187/344 (54%), Gaps = 2/344 (0%)

Query: 127 DGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWK 186
           D +  V   L   YA +K  ++ + VF QM+ +  +P + +C   +++    +  D+   
Sbjct: 108 DSSPCVFDSLFKTYAQMKKLRNAIDVFCQMKDYGFLPRVESCNAYISASISLQRGDIALT 167

Query: 187 VYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYC 246
            Y++M +  +  N++  N+++ A CK   ++K  ++  +ME       + +YNTLIA YC
Sbjct: 168 FYREMQRYRISPNVYTLNMVMCAFCKWGKLEKAIEVFKKMETMGFSPTITSYNTLIAGYC 227

Query: 247 KKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKG--ATPNHV 304
            KG+    + ++  ME+ G+ PD VT+N+LI+GFCR G++ EA ++F ++K     PN +
Sbjct: 228 NKGLLNSGMKLKILMEKNGVRPDDVTFNTLINGFCRGGKLHEANKIFSEMKANDVVPNTI 287

Query: 305 TYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM 364
           TY TLI+GY +  + E   RL + M   G+   ++TYN+++  LC EGR + A  L+ E+
Sbjct: 288 TYNTLINGYSQVGNSEMGGRLHDEMLRNGIKADILTYNALILGLCMEGRTKKAAYLVKEL 347

Query: 365 NEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEM 424
           + + + P++ T + LI   C   ++  A ++   M+ +G   +  T+K LI  FCK ++ 
Sbjct: 348 DRENLVPNSSTFSALITGQCVRKNSERAFQLYKSMIRSGCHPNYHTFKMLISTFCKNEDF 407

Query: 425 DIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
           D A E++  M +   +P   + S L  G      EE  LKL  E
Sbjct: 408 DGAVEVVREMSERSIAPDSDTLSELCRGLWLSGKEELALKLCKE 451



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 87/294 (29%), Positives = 148/294 (50%), Gaps = 2/294 (0%)

Query: 254 ALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLID 311
           AL     M+R  ISP++ T N ++  FC+ G++ +A  +F+ ++  G +P   +Y TLI 
Sbjct: 165 ALTFYREMQRYRISPNVYTLNMVMCAFCKWGKLEKAIEVFKKMETMGFSPTITSYNTLIA 224

Query: 312 GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAP 371
           GYC    L   ++L+ +M   GV P  VT+N+++   C+ G++ +AN++ +EM    + P
Sbjct: 225 GYCNKGLLNSGMKLKILMEKNGVRPDDVTFNTLINGFCRGGKLHEANKIFSEMKANDVVP 284

Query: 372 DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
           + +T NTLIN Y ++G++    ++ + ML  G+  D  TY ALI G C       A  L+
Sbjct: 285 NTITYNTLINGYSQVGNSEMGGRLHDEMLRNGIKADILTYNALILGLCMEGRTKKAAYLV 344

Query: 432 FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
             +      P+  ++S L+ G C + N E   +L    +  G   +   ++ LI  FCK 
Sbjct: 345 KELDRENLVPNSSTFSALITGQCVRKNSERAFQLYKSMIRSGCHPNYHTFKMLISTFCKN 404

Query: 492 EKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
           E  D A  +   M    I  DS   + L    W +G+ +    +  +M  + LM
Sbjct: 405 EDFDGAVEVVREMSERSIAPDSDTLSELCRGLWLSGKEELALKLCKEMEMKHLM 458



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 83/299 (27%), Positives = 140/299 (46%), Gaps = 2/299 (0%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N + L+ ++  +      +  ++VF +M      P + +   L+       L +   K+ 
Sbjct: 180 NVYTLNMVMCAFCKWGKLEKAIEVFKKMETMGFSPTITSYNTLIAGYCNKGLLNSGMKLK 239

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
             M + GV  +   +N LI+  C+   + +  K+  EM+  DV  +  TYNTLI  Y + 
Sbjct: 240 ILMEKNGVRPDDVTFNTLINGFCRGGKLHEANKIFSEMKANDVVPNTITYNTLINGYSQV 299

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTY 306
           G       + D M R GI  DI+TYN+LI G C EGR ++A  L +++  +   PN  T+
Sbjct: 300 GNSEMGGRLHDEMLRNGIKADILTYNALILGLCMEGRTKKAAYLVKELDRENLVPNSSTF 359

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
           + LI G C   + E A +L + M   G +P   T+  ++   CK      A  ++ EM+E
Sbjct: 360 SALITGQCVRKNSERAFQLYKSMIRSGCHPNYHTFKMLISTFCKNEDFDGAVEVVREMSE 419

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMD 425
           + IAPD+ T + L       G    A+K+   M    LM + F     I+   +++E +
Sbjct: 420 RSIAPDSDTLSELCRGLWLSGKEELALKLCKEMEMKHLMPEGFDKXKTINXRAESEEKE 478



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 65/249 (26%), Positives = 112/249 (44%), Gaps = 2/249 (0%)

Query: 273 YNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMA 330
           ++SL   + +  ++R A  +F  +K  G  P   +    I         + AL     M 
Sbjct: 114 FDSLFKTYAQMKKLRNAIDVFCQMKDYGFLPRVESCNAYISASISLQRGDIALTFYREMQ 173

Query: 331 AKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTA 390
              + P V T N ++   CK G++  A  +  +M     +P   + NTLI  YC  G   
Sbjct: 174 RYRISPNVYTLNMVMCAFCKWGKLEKAIEVFKKMETMGFSPTITSYNTLIAGYCNKGLLN 233

Query: 391 SAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLV 450
           S MK+K  M + G+  D  T+  LI+GFC+  ++  A ++   M      P+  +Y+ L+
Sbjct: 234 SGMKLKILMEKNGVRPDDVTFNTLINGFCRGGKLHEANKIFSEMKANDVVPNTITYNTLI 293

Query: 451 DGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGIL 510
           +GY    N E   +L DE +  G+  D+  Y ALI   C + +   A  L   +    ++
Sbjct: 294 NGYSQVGNSEMGGRLHDEMLRNGIKADILTYNALILGLCMEGRTKKAAYLVKELDRENLV 353

Query: 511 GDSVIYTSL 519
            +S  +++L
Sbjct: 354 PNSSTFSAL 362



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/216 (25%), Positives = 103/216 (47%), Gaps = 4/216 (1%)

Query: 341 YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML 400
           ++S+ +   +  ++R+A  +  +M +    P   +CN  I+A   +     A+     M 
Sbjct: 114 FDSLFKTYAQMKKLRNAIDVFCQMKDYGFLPRVESCNAYISASISLQRGDIALTFYREMQ 173

Query: 401 EAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKN--N 458
              +  + +T   ++  FCK  +++ A E+   M   GFSP+  SY+ L+ GYCNK   N
Sbjct: 174 RYRISPNVYTLNMVMCAFCKWGKLEKAIEVFKKMETMGFSPTITSYNTLIAGYCNKGLLN 233

Query: 459 EEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTS 518
               LK+L E    G+  D   +  LI  FC+  K+  A ++F+ M+ N ++ +++ Y +
Sbjct: 234 SGMKLKILME--KNGVRPDDVTFNTLINGFCRGGKLHEANKIFSEMKANDVVPNTITYNT 291

Query: 519 LAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSF 554
           L   Y + G  +    + D+M R  +   +  Y + 
Sbjct: 292 LINGYSQVGNSEMGGRLHDEMLRNGIKADILTYNAL 327



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 55/240 (22%), Positives = 99/240 (41%)

Query: 306 YTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMN 365
           + +L   Y +   L  A+ +   M   G  P V + N+ +       R   A     EM 
Sbjct: 114 FDSLFKTYAQMKKLRNAIDVFCQMKDYGFLPRVESCNAYISASISLQRGDIALTFYREMQ 173

Query: 366 EKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMD 425
             +I+P+  T N ++ A+CK G    A++V  +M   G      +Y  LI G+C    ++
Sbjct: 174 RYRISPNVYTLNMVMCAFCKWGKLEKAIEVFKKMETMGFSPTITSYNTLIAGYCNKGLLN 233

Query: 426 IAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
              +L   M   G  P   +++ L++G+C         K+  E  +  +  +   Y  LI
Sbjct: 234 SGMKLKILMEKNGVRPDDVTFNTLINGFCRGGKLHEANKIFSEMKANDVVPNTITYNTLI 293

Query: 486 RRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
             + +    +   RL + M  NGI  D + Y +L       G  K  + ++ ++ R  L+
Sbjct: 294 NGYSQVGNSEMGGRLHDEMLRNGIKADILTYNALILGLCMEGRTKKAAYLVKELDRENLV 353



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 38/191 (19%), Positives = 80/191 (41%), Gaps = 2/191 (1%)

Query: 372 DNVTC--NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKE 429
           D+  C  ++L   Y ++    +A+ V  +M + G +    +  A I      +  DIA  
Sbjct: 108 DSSPCVFDSLFKTYAQMKKLRNAIDVFCQMKDYGFLPRVESCNAYISASISLQRGDIALT 167

Query: 430 LLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFC 489
               M     SP+  + + ++  +C     E  +++  +  + G    ++ Y  LI  +C
Sbjct: 168 FYREMQRYRISPNVYTLNMVMCAFCKWGKLEKAIEVFKKMETMGFSPTITSYNTLIAGYC 227

Query: 490 KKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLK 549
            K  ++   +L  LM+ NG+  D V + +L   + R G+    + I  +M    ++    
Sbjct: 228 NKGLLNSGMKLKILMEKNGVRPDDVTFNTLINGFCRGGKLHEANKIFSEMKANDVVPNTI 287

Query: 550 IYRSFSASYAK 560
            Y +    Y++
Sbjct: 288 TYNTLINGYSQ 298


>gi|449462543|ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Cucumis sativus]
          Length = 822

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 126/447 (28%), Positives = 218/447 (48%), Gaps = 25/447 (5%)

Query: 82  WTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVI--- 138
           ++++    K+   + A+N LE+I           L++ + IH  PD    V+ WL     
Sbjct: 387 YSLMQGFCKSDQIEHAENALEEI-----------LSSGLSIH--PDNCYSVVHWLCKKFR 433

Query: 139 FYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVA 198
           +++  + T+        M   N  P     T+L+  L KD       +++ ++++ G  A
Sbjct: 434 YHSAFRFTK-------MMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPA 486

Query: 199 NIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQ 258
           +    N LIH  C +  + +  +++ EM  + +  D  TYN LI  +C +G       ++
Sbjct: 487 SKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLR 546

Query: 259 DRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRA 316
           + M + GI PDI TYN L+ G C  G++ +A +L+ + K  G   N  TY  +++GYC+A
Sbjct: 547 EEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKA 606

Query: 317 NDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTC 376
           N +E+   L   + +K +    + YN I++  C+ G +  A +LL  M  K I P+  T 
Sbjct: 607 NRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATY 666

Query: 377 NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD 436
           ++LI+  C IG    A  + + M + G + +   Y ALI G+CK  +MD A+     M+ 
Sbjct: 667 SSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMIS 726

Query: 437 AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDY 496
               P+  +Y+ ++DGYC   N E    LL +    G+  DV  Y  L   FCK   +D 
Sbjct: 727 FNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDN 786

Query: 497 AQRLFNLMQGNGILGDSVIYTSLAYAY 523
           A ++ + M   G+  D + YT+L + +
Sbjct: 787 AFKVCDQMATEGLPVDEITYTTLVHGW 813



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 113/429 (26%), Positives = 203/429 (47%), Gaps = 39/429 (9%)

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
           P + + T ++N+L K    +   +++ KM +LG+  N+  YN +I+  C++  +D   +L
Sbjct: 241 PDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFEL 300

Query: 223 LCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR 282
             +M  K V+ +L TY  LI    K     +   V D M   G +P++V +N+LI G+C+
Sbjct: 301 KEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCK 360

Query: 283 EGRMREARRLFRDI---KGATPNHVTYTTLIDGYCRANDLE------------------- 320
            G +  A ++ +D+   K  TP  VT  +L+ G+C+++ +E                   
Sbjct: 361 MGNIEGALKI-KDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPD 419

Query: 321 ----------------EALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM 364
                            A R  ++M ++   P  +    ++  LCK+G+  +A  L   +
Sbjct: 420 NCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRL 479

Query: 365 NEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEM 424
            EK      VT N LI+  C  G    A ++   MLE GL +D+ TY ALI GFC   ++
Sbjct: 480 LEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKV 539

Query: 425 DIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRAL 484
           +    L   M   G  P   +Y++L+ G CN    +  +KL DEF + GL  ++  Y  +
Sbjct: 540 EGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIM 599

Query: 485 IRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL 544
           +  +CK  +++  + LFN +    +  +S++Y  +  A+ + G   A   +L++M  + +
Sbjct: 600 MEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGI 659

Query: 545 MITLKIYRS 553
           +     Y S
Sbjct: 660 LPNCATYSS 668



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 129/562 (22%), Positives = 253/562 (45%), Gaps = 61/562 (10%)

Query: 58  SLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLN 117
            ++C  F +  S    ++ ++ S+ T+I +L ++K    A+ +L    +R       VLN
Sbjct: 89  PMTCLNFFYFASNSFKFRFTIHSYCTLILLLIRSKFIPPARLLL----IRLIDGNLPVLN 144

Query: 118 A-----LVKIHDDPDGNSHVLS---WLVIF----------YANLKMTQDGLQVFDQMRVH 159
                  ++I +   G + V+    W   F          + NL  +   + VF  +   
Sbjct: 145 LDSEKFHIEIANALFGLTSVVGRFEWTQAFDLLIHVYSTQFRNLGFSC-AVDVFYLLARK 203

Query: 160 NLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKV 219
              P L  C  LL+SL K    +   +V++ M + G   ++  +  +I+A CK   ++  
Sbjct: 204 GTFPSLKTCNFLLSSLVKANEFEKCCEVFRVMSE-GACPDVFSFTNVINALCKGGKMENA 262

Query: 220 EKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHG 279
            +L  +ME   +  ++ TYN +I   C+ G    A  ++++M  +G+ P++ TY +LI+G
Sbjct: 263 IELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALING 322

Query: 280 FCREGRMREARRLFRDIKGA--TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPG 337
             +     +   +  ++ G+   PN V +  LIDGYC+  ++E AL++++VM +K + P 
Sbjct: 323 LIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPT 382

Query: 338 VVTYNSILRKLCKEGRIRDANRLLNE---------------------------------- 363
            VT  S+++  CK  +I  A   L E                                  
Sbjct: 383 SVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTK 442

Query: 364 -MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAK 422
            M  +   P ++    L+   CK G    A ++  R+LE G    + T  ALIHG C A 
Sbjct: 443 MMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAG 502

Query: 423 EMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYR 482
           ++  A  ++  ML+ G      +Y+ L+ G+CN+   E   +L +E   RG+  D+  Y 
Sbjct: 503 KLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYN 562

Query: 483 ALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRR 542
            L+R  C   K+D A +L++  + +G++ +   Y  +   Y +A   +   ++ +++  +
Sbjct: 563 FLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSK 622

Query: 543 RLMITLKIYRSFSASYAKDNEI 564
           ++ +   +Y     ++ ++  +
Sbjct: 623 KMELNSIVYNIIIKAHCQNGNV 644



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 136/540 (25%), Positives = 227/540 (42%), Gaps = 63/540 (11%)

Query: 51  YNC-----CHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIA 105
           YNC     C    L  AF    +  V   + +L+++  +I+ L K   F    ++L+++ 
Sbjct: 281 YNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMI 340

Query: 106 LRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHL 165
              F     V N L+      DG           Y  +   +  L++ D M   N+ P  
Sbjct: 341 GSGFNPNVVVFNNLI------DG-----------YCKMGNIEGALKIKDVMISKNITPTS 383

Query: 166 HACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNV--LIHACCKSSDVDKVEKLL 223
                L+    K    +      ++++  G+  +IH  N   ++H  CK        +  
Sbjct: 384 VTLYSLMQGFCKSDQIEHAENALEEILSSGL--SIHPDNCYSVVHWLCKKFRYHSAFRFT 441

Query: 224 CEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCRE 283
             M  ++ R        L+   CK G H EA  +  R+  +G     VT N+LIHG C  
Sbjct: 442 KMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGA 501

Query: 284 GRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTY 341
           G++ EA R+ +++  +G   + +TY  LI G+C    +E   RLRE M  +G+ P + TY
Sbjct: 502 GKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTY 561

Query: 342 NSILRKLCKEG-----------------------------------RIRDANRLLNEMNE 366
           N +LR LC  G                                   RI D   L NE+  
Sbjct: 562 NFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLS 621

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
           KK+  +++  N +I A+C+ G+ A+A+++   M   G++ +  TY +LIHG C    ++ 
Sbjct: 622 KKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVED 681

Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
           AK L+  M   GF P+   Y+ L+ GYC     +       E +S  +  +   Y  +I 
Sbjct: 682 AKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMID 741

Query: 487 RFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMI 546
            +CK   ++ A  L   M+ +GI+ D V Y  L   + +A +      + D M    L +
Sbjct: 742 GYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPV 801



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 64/262 (24%), Positives = 115/262 (43%), Gaps = 19/262 (7%)

Query: 54  CHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTP 113
           C++  L  A   W E        ++ ++  M+    K    +  +N+  ++  +      
Sbjct: 569 CNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNS 628

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
            V N ++K H   +GN                    LQ+ + M+   ++P+    + L++
Sbjct: 629 IVYNIIIKAHCQ-NGN----------------VAAALQLLENMKSKGILPNCATYSSLIH 671

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
            +    L +    +  +M + G V N+  Y  LI   CK   +D  E    EM   ++  
Sbjct: 672 GVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHP 731

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           + FTY  +I  YCK G   +A  +  +M+  GI PD+VTYN L +GFC+   M  A ++ 
Sbjct: 732 NKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVC 791

Query: 294 RDI--KGATPNHVTYTTLIDGY 313
             +  +G   + +TYTTL+ G+
Sbjct: 792 DQMATEGLPVDEITYTTLVHGW 813


>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
 gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
          Length = 724

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 119/433 (27%), Positives = 207/433 (47%), Gaps = 34/433 (7%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           NS +   L+   +      + L++ ++M +    P ++    ++    +        K+ 
Sbjct: 244 NSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLV 303

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVR---------------- 232
            +M+  G   N   Y  L+H  CK+  +D+ + LL ++   +V                 
Sbjct: 304 DRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVPGPNVVHFNTLVNGFVRNGRLN 363

Query: 233 ----------------ADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSL 276
                            D+FT++TL+   CKKG+   AL + + M+ +G  P++ TY  L
Sbjct: 364 EATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTIL 423

Query: 277 IHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGV 334
           I GFC++G++ EA  + R++  KG + N V Y  LI   C+   + EAL +   M++KG 
Sbjct: 424 IDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGC 483

Query: 335 YPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMK 394
            P + T+NS++  LC+   + DA  L  +M  + +  ++VT NTLI+A+ + G+   A+K
Sbjct: 484 KPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALK 543

Query: 395 VKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYC 454
           + N ML  G  LD+ TY  LI   CK   ++    L   M+  G +PS  + + L++G+C
Sbjct: 544 LVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFC 603

Query: 455 NKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSV 514
                   L+ + + + RG   D+  Y +LI   CK+ ++  A  LF  +Q  GI  DS+
Sbjct: 604 TAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSI 663

Query: 515 IYTSLAYAYWRAG 527
            Y +L     R G
Sbjct: 664 TYNTLICWLCREG 676



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 112/366 (30%), Positives = 187/366 (51%), Gaps = 3/366 (0%)

Query: 163 PHLHACTVLLNSLAKD-RLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEK 221
           P++     L+N   ++ RL +    VY KM+  G V ++  ++ L++  CK        +
Sbjct: 344 PNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALE 403

Query: 222 LLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFC 281
           L+ +M+ K  + +L TY  LI  +CKKG   EA  +   M  +G S + V YN+LI   C
Sbjct: 404 LVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALC 463

Query: 282 REGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVV 339
           + G++ EA  +F ++  KG  P+  T+ +LI G CR +++E+AL L   M  +GV    V
Sbjct: 464 KHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSV 523

Query: 340 TYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRM 399
           T+N+++    + G I++A +L+N+M  +    D +T N LI A CK G     + +   M
Sbjct: 524 TFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEM 583

Query: 400 LEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNE 459
           +  GL     T   LI+GFC A ++  A E +  M+  GFSP   +Y+ L++G C +   
Sbjct: 584 IRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRI 643

Query: 460 EALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
           +  L L ++  + G+  D   Y  LI   C++   D A  L      NG + + V +  L
Sbjct: 644 QEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVTWNIL 703

Query: 520 AYAYWR 525
            Y + +
Sbjct: 704 VYNFGK 709



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 121/426 (28%), Positives = 196/426 (46%), Gaps = 27/426 (6%)

Query: 80  SHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIF 139
           ++  ++H L K      AQ +L K+   + +   +++N  V+                  
Sbjct: 317 TYGYLMHGLCKTCRIDEAQALLSKVPGPNVVHFNTLVNGFVR------------------ 358

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
             N ++ +    V+D+M  +  +P +   + L+N L K  L     ++   M   G   N
Sbjct: 359 --NGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPN 416

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
           ++ Y +LI   CK   +++   +L EM  K    +   YN LI+  CK G  +EAL +  
Sbjct: 417 LNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFG 476

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRAN 317
            M  +G  PDI T+NSLI G CR   M +A  L+RD  ++G   N VT+ TLI  + R  
Sbjct: 477 EMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRG 536

Query: 318 DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCN 377
           +++EAL+L   M  +G     +TYN +++ LCK G +     L  EM  K + P  +TCN
Sbjct: 537 EIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCN 596

Query: 378 TLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA 437
            LIN +C  G   +A++    M+  G   D  TY +LI+G CK   +  A  L   +   
Sbjct: 597 ILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAE 656

Query: 438 GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK-----E 492
           G  P   +Y+ L+   C +   +    LL   V  G   +   +  L+  F K+     +
Sbjct: 657 GIQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVTWNILVYNFGKQSNSEGQ 716

Query: 493 KVDYAQ 498
            + YAQ
Sbjct: 717 TITYAQ 722



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 150/581 (25%), Positives = 247/581 (42%), Gaps = 34/581 (5%)

Query: 25  HWAKLLNPNIASSLTSTAIHKVLLNLYNCCHIP---SLSCAFFKWAESAVPNYKHSLQSH 81
            W +LL P     L  +        L     +P     S   FKWA  A   Y HS   +
Sbjct: 49  EWERLLKPFDLKELRRSFNKITPFQLCKLLELPLDVETSMEIFKWA-GAQKGYCHSFSVY 107

Query: 82  WTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHD----------------- 124
           + +I  L     FK    +L ++     +   S+   ++K +                  
Sbjct: 108 YLLIDKLGAAAGFKVIDRLLLQMKEEGIVFRESLFILIMKYYGRAGLPGQATRLLLDMKG 167

Query: 125 ----DPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRL 180
               +P   S+ +   V+   N         VF  M    + P+ +   +++ +L     
Sbjct: 168 VYCCEPSFRSYNVVLDVLVVGNCPSVAS--NVFYDMLSKGVSPNDYTFGLVMKALCMVNE 225

Query: 181 TDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNT 240
            D    + + M + G V N  +Y  LI A  K   VD+  KLL EM       D+ T+NT
Sbjct: 226 VDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNT 285

Query: 241 LIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGAT 300
           +I  +C+     E   + DRM  +G +P+ +TY  L+HG C+  R+ EA+ L   + G  
Sbjct: 286 VIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVPG-- 343

Query: 301 PNHVTYTTLIDGYCRANDLEEALR-LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
           PN V + TL++G+ R   L EA   + + M   G  P V T+++++  LCK+G    A  
Sbjct: 344 PNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALE 403

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
           L+N+M+ K   P+  T   LI+ +CK G    A  +   ML  G  L+   Y ALI   C
Sbjct: 404 LVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALC 463

Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
           K  ++  A ++   M   G  P   +++ L+ G C  +  E  L L  + V  G+  +  
Sbjct: 464 KHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSV 523

Query: 480 VYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
            +  LI  F ++ ++  A +L N M   G   D + Y  L  A  + G  +    + ++M
Sbjct: 524 TFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEM 583

Query: 540 YRRRL---MITLKIYRSFSASYAKDNEILDLFWSHVVDRGL 577
            R+ L   +IT  I  +   +  K +  L+ F   ++ RG 
Sbjct: 584 IRKGLTPSIITCNILINGFCTAGKVHNALE-FMRDMIHRGF 623


>gi|357474081|ref|XP_003607325.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355508380|gb|AES89522.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 834

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 131/468 (27%), Positives = 229/468 (48%), Gaps = 40/468 (8%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           LQ+FD++    ++P +   +VL+N  +K    +  +++Y +M  +G+  N+ + N L+  
Sbjct: 345 LQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEG 404

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
             + + ++    L  E     +  ++ TYN L+    + G   EA  + ++M  +GI+P 
Sbjct: 405 FHEQNLLEHAYGLFDEAVEHGI-TNVVTYNILLKWLGELGKVNEACNLWEKMVSKGITPS 463

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLRE 327
           +V+YN+LI G C++G M +A  + + I  +G  PN VTYT LIDG+ +  D E A  + E
Sbjct: 464 LVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFE 523

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLN------------------------- 362
            M A  + P   T+N+++  L K GR+ +    LN                         
Sbjct: 524 QMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEG 583

Query: 363 ----------EMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYK 412
                     EM E  I+PD +T  +LI+  CK      A+++ + M   G+ LD   Y 
Sbjct: 584 AVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYS 643

Query: 413 ALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSR 472
           ALI GFCK  +M+ A +    +LD G +P+   Y+ ++ G+ + NN EA L L  E +  
Sbjct: 644 ALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKN 703

Query: 473 GLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKAC 532
            +  D+ VY ++I    K+ K+  A  L++ M    I+ D V+YT L       G+ +  
Sbjct: 704 KVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENA 763

Query: 533 SDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSH--VVDRGLM 578
           S IL +M    +  ++ +Y    A   ++  + + F  H  ++D+GL+
Sbjct: 764 SKILKEMDGNNITPSVLVYNILIAGNFREGNLQEAFRLHDEMLDKGLV 811



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 105/393 (26%), Positives = 202/393 (51%), Gaps = 6/393 (1%)

Query: 181 TDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNT 240
            ++  +++ ++V+ GVV ++ +++VLI+ C K  D++K  +L   M+   ++ ++F  N+
Sbjct: 341 VNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNS 400

Query: 241 LIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KG 298
           L+  + ++ +   A  + D     GI+ ++VTYN L+      G++ EA  L+  +  KG
Sbjct: 401 LLEGFHEQNLLEHAYGLFDEAVEHGIT-NVVTYNILLKWLGELGKVNEACNLWEKMVSKG 459

Query: 299 ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDAN 358
            TP+ V+Y  LI G+C+   +++A  + + +  +G+ P  VTY  ++    K+G    A 
Sbjct: 460 ITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAF 519

Query: 359 RLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGF 418
            +  +M    IAP + T NT+IN   K G  +      N  ++ G +    TY ++I GF
Sbjct: 520 VVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGF 579

Query: 419 CKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDV 478
            K   +D A      M ++G SP   +Y+ L+DG C  N     L++  +   +G+ +DV
Sbjct: 580 FKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDV 639

Query: 479 SVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDD 538
             Y ALI  FCK   ++ A + F  +   G+  ++V+Y S+   +      +A  ++  +
Sbjct: 640 VAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQE 699

Query: 539 MYRRRLMITLKIYRSFSASYAKDNEI---LDLF 568
           M + ++   L++Y S      K+ ++   LDL+
Sbjct: 700 MIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLY 732



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 137/579 (23%), Positives = 245/579 (42%), Gaps = 83/579 (14%)

Query: 84  MIHILTKN-KHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDG------NSHVLSWL 136
           +IHIL+ N K   S Q +L      D  +TPS     V+   +  G      +S V ++L
Sbjct: 100 LIHILSSNSKTCSSLQFLLNNYVFGD--ATPSA-KVFVECLLECSGRYGFESDSRVFNYL 156

Query: 137 VIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGV 196
           +  +  +    D ++ F  M  H+L+P +     LL ++ +  +     ++Y +MV+ G+
Sbjct: 157 LKSFVRVNKITDAVECFRTMLEHDLVPWVPIMNNLLTAMVRRNMVCDARQLYDEMVERGI 216

Query: 197 VANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYC---------- 246
             + +  +V++ AC K    ++VEK   E + + +  D   Y+ L+   C          
Sbjct: 217 YGDCYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVDAAAYSILVQAVCRRLDLNLACE 276

Query: 247 -------------------------KKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFC 281
                                    K+G   EAL ++D M   G+  +++   SL+ G+C
Sbjct: 277 LLKEMREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEMVSVGLPMNVIVTRSLMKGYC 336

Query: 282 REGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYP--- 336
             G +  A +LF ++   G  P+ V ++ LI+G  +  D+E+A  L   M   G+ P   
Sbjct: 337 VLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVF 396

Query: 337 -------------------------------GVVTYNSILRKLCKEGRIRDANRLLNEMN 365
                                           VVTYN +L+ L + G++ +A  L  +M 
Sbjct: 397 IVNSLLEGFHEQNLLEHAYGLFDEAVEHGITNVVTYNILLKWLGELGKVNEACNLWEKMV 456

Query: 366 EKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMD 425
            K I P  V+ N LI  +CK G    A  +   +LE GL  +  TY  LI GF K  + +
Sbjct: 457 SKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSE 516

Query: 426 IAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
            A  +   M+ A  +P+  +++ +++G             L+ F+ +G       Y ++I
Sbjct: 517 RAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSII 576

Query: 486 RRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
             F K+  VD A   +  M  +GI  D + YTSL     ++ +     ++  DM  + + 
Sbjct: 577 DGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMK 636

Query: 546 ITLKIYRSFSASYAK--DNEILDLFWSHVVDRGLMSKHI 582
           + +  Y +    + K  D E    F++ ++D GL    +
Sbjct: 637 LDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTV 675



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 98/391 (25%), Positives = 181/391 (46%), Gaps = 6/391 (1%)

Query: 132 VLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKM 191
           +L WL      L    +   ++++M    + P L +   L+    K    D  + + K +
Sbjct: 435 LLKWL----GELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSI 490

Query: 192 VQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMH 251
           ++ G+  N   Y +LI    K  D ++   +  +M   ++     T+NT+I    K G  
Sbjct: 491 LERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRV 550

Query: 252 YEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTL 309
            E     +   ++G     +TYNS+I GF +EG +  A   +R++   G +P+ +TYT+L
Sbjct: 551 SETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSL 610

Query: 310 IDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI 369
           IDG C++N +  AL +   M  KG+   VV Y++++   CK   +  A++   E+ +  +
Sbjct: 611 IDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGL 670

Query: 370 APDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKE 429
            P+ V  N++I+ +  + +  +A+ +   M++  +  D   Y ++I G  K  ++ +A +
Sbjct: 671 TPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALD 730

Query: 430 LLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFC 489
           L   ML     P    Y+ L++G  N    E   K+L E     +   V VY  LI    
Sbjct: 731 LYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASKILKEMDGNNITPSVLVYNILIAGNF 790

Query: 490 KKEKVDYAQRLFNLMQGNGILGDSVIYTSLA 520
           ++  +  A RL + M   G++ D   Y  L 
Sbjct: 791 REGNLQEAFRLHDEMLDKGLVPDDTTYDILV 821



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 95/309 (30%), Positives = 137/309 (44%), Gaps = 2/309 (0%)

Query: 146 TQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNV 205
           ++    VF+QM   N+ P  H    ++N L K              ++ G V+    YN 
Sbjct: 515 SERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNS 574

Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
           +I    K   VD       EM    +  D+ TY +LI   CK      AL +   M+ +G
Sbjct: 575 IIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKG 634

Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEAL 323
           +  D+V Y++LI GFC+   M  A + F ++   G TPN V Y ++I G+   N++E AL
Sbjct: 635 MKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAAL 694

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
            L + M    V   +  Y SI+  L KEG++  A  L +EM  K I PD V    LIN  
Sbjct: 695 NLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGL 754

Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY 443
              G   +A K+   M    +      Y  LI G  +   +  A  L   MLD G  P  
Sbjct: 755 SNNGQLENASKILKEMDGNNITPSVLVYNILIAGNFREGNLQEAFRLHDEMLDKGLVPDD 814

Query: 444 CSYSWLVDG 452
            +Y  LV+G
Sbjct: 815 TTYDILVNG 823



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 79/330 (23%), Positives = 146/330 (44%), Gaps = 19/330 (5%)

Query: 62  AFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVK 121
           AF  + +    N   +  +  T+I+ L K       Q+ L     + F+ST    N+++ 
Sbjct: 518 AFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSII- 576

Query: 122 IHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLT 181
                DG          F+         L  + +M    + P +   T L++ L K    
Sbjct: 577 -----DG----------FFKE-GAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKI 620

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
            +  +++  M   G+  ++  Y+ LI   CK  D++   K   E+    +  +   YN++
Sbjct: 621 GLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSM 680

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGA 299
           I+ +        AL +   M +  +  D+  Y S+I G  +EG++  A  L+ ++  K  
Sbjct: 681 ISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDI 740

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
            P+ V YT LI+G      LE A ++ + M    + P V+ YN ++    +EG +++A R
Sbjct: 741 VPDIVMYTVLINGLSNNGQLENASKILKEMDGNNITPSVLVYNILIAGNFREGNLQEAFR 800

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
           L +EM +K + PD+ T + L+N   K+  T
Sbjct: 801 LHDEMLDKGLVPDDTTYDILVNGKLKVSHT 830


>gi|449519270|ref|XP_004166658.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g19440, chloroplastic-like [Cucumis sativus]
          Length = 799

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 126/447 (28%), Positives = 218/447 (48%), Gaps = 25/447 (5%)

Query: 82  WTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVI--- 138
           ++++    K+   + A+N LE+I           L++ + IH  PD    V+ WL     
Sbjct: 364 YSLMQGFCKSDQIEHAENALEEI-----------LSSGLSIH--PDNCYSVVHWLCKKFR 410

Query: 139 FYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVA 198
           +++  + T+        M   N  P     T+L+  L KD       +++ ++++ G  A
Sbjct: 411 YHSAFRFTK-------MMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPA 463

Query: 199 NIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQ 258
           +    N LIH  C +  + +  +++ EM  + +  D  TYN LI  +C +G       ++
Sbjct: 464 SKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLR 523

Query: 259 DRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRA 316
           + M + GI PDI TYN L+ G C  G++ +A +L+ + K  G   N  TY  +++GYC+A
Sbjct: 524 EEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKA 583

Query: 317 NDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTC 376
           N +E+   L   + +K +    + YN I++  C+ G +  A +LL  M  K I P+  T 
Sbjct: 584 NRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATY 643

Query: 377 NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD 436
           ++LI+  C IG    A  + + M + G + +   Y ALI G+CK  +MD A+     M+ 
Sbjct: 644 SSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMIS 703

Query: 437 AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDY 496
               P+  +Y+ ++DGYC   N E    LL +    G+  DV  Y  L   FCK   +D 
Sbjct: 704 FNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDN 763

Query: 497 AQRLFNLMQGNGILGDSVIYTSLAYAY 523
           A ++ + M   G+  D + YT+L + +
Sbjct: 764 AFKVCDQMATEGLPVDEITYTTLVHGW 790



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 110/410 (26%), Positives = 198/410 (48%), Gaps = 2/410 (0%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           ++ +++F +M    + P++     ++N L ++   D  +++ +KM   GV  N+  Y  L
Sbjct: 237 ENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGAL 296

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           I+   K +  DKV  +L EM       ++  +N LI  YCK G    AL ++D M  + I
Sbjct: 297 INGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNI 356

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
           +P  VT  SL+ GFC+  ++  A     +I   G + +     +++   C+      A R
Sbjct: 357 TPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFR 416

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
             ++M ++   P  +    ++  LCK+G+  +A  L   + EK      VT N LI+  C
Sbjct: 417 FTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLC 476

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
             G    A ++   MLE GL +D+ TY ALI GFC   +++    L   M   G  P   
Sbjct: 477 GAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIY 536

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
           +Y++L+ G CN    +  +KL DEF + GL  ++  Y  ++  +CK  +++  + LFN +
Sbjct: 537 TYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNEL 596

Query: 505 QGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSF 554
               +  +S++Y  +  A+ + G   A   +L++M  + ++     Y S 
Sbjct: 597 LSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSL 646



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 108/452 (23%), Positives = 209/452 (46%), Gaps = 38/452 (8%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           + VF  +      P L  C   L+SL K    +   +V++ M + G   ++  +  +I+A
Sbjct: 171 VDVFYLLARKGTFPSLKTCNFXLSSLVKANEFEKCCEVFRVMSE-GACPDVFSFTNVINA 229

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
            CK   ++   +L  +ME   +  ++ TYN +I   C+ G    A  ++++M  +G+ P+
Sbjct: 230 LCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPN 289

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDIKGA--TPNHVTYTTLIDGYCRANDLEEALRLRE 327
           + TY +LI+G  +     +   +  ++ GA   PN V +  LIDGYC+  ++E AL++++
Sbjct: 290 LKTYGALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIEGALKIKD 349

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE------------------------ 363
           VM +K + P  VT  S+++  CK  +I  A   L E                        
Sbjct: 350 VMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKF 409

Query: 364 -----------MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYK 412
                      M  +   P ++    L+   CK G    A ++  R+LE G    + T  
Sbjct: 410 RYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSN 469

Query: 413 ALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSR 472
           ALIHG C A ++  A  ++  ML+ G      +Y+ L+ G+CN+   E   +L +E   R
Sbjct: 470 ALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKR 529

Query: 473 GLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKAC 532
           G+  D+  Y  L+R  C   K+D A +L++  + +G++ +   Y  +   Y +A   +  
Sbjct: 530 GIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDV 589

Query: 533 SDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
            ++ +++  +++ +   +Y     ++ ++  +
Sbjct: 590 ENLFNELLSKKMELNSIVYNIIIKAHCQNGNV 621



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 137/548 (25%), Positives = 229/548 (41%), Gaps = 63/548 (11%)

Query: 51  YNC-----CHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIA 105
           YNC     C    L  AF    +  V   + +L+++  +I+ L K   F    ++L+++ 
Sbjct: 258 YNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHILDEMI 317

Query: 106 LRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHL 165
              F     V N L+      DG           Y  +   +  L++ D M   N+ P  
Sbjct: 318 GAGFNPNVVVFNNLI------DG-----------YCKMGNIEGALKIKDVMISKNITPTS 360

Query: 166 HACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNV--LIHACCKSSDVDKVEKLL 223
                L+    K    +      ++++  G+  +IH  N   ++H  CK        +  
Sbjct: 361 VTLYSLMQGFCKSDQIEHAENALEEILSSGL--SIHPDNCYSVVHWLCKKFRYHSAFRFT 418

Query: 224 CEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCRE 283
             M  ++ R        L+   CK G H EA  +  R+  +G     VT N+LIHG C  
Sbjct: 419 KMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGA 478

Query: 284 GRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTY 341
           G++ EA R+ +++  +G   + +TY  LI G+C    +E   RLRE M  +G+ P + TY
Sbjct: 479 GKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTY 538

Query: 342 NSILRKLCKEG-----------------------------------RIRDANRLLNEMNE 366
           N +LR LC  G                                   RI D   L NE+  
Sbjct: 539 NFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLS 598

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
           KK+  +++  N +I A+C+ G+ A+A+++   M   G++ +  TY +LIHG C    ++ 
Sbjct: 599 KKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVED 658

Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
           AK L+  M   GF P+   Y+ L+ GYC     +       E +S  +  +   Y  +I 
Sbjct: 659 AKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMID 718

Query: 487 RFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMI 546
            +CK   ++ A  L   M+ +GI+ D V Y  L   + +A +      + D M    L +
Sbjct: 719 GYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPV 778

Query: 547 TLKIYRSF 554
               Y + 
Sbjct: 779 DEITYTTL 786



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 64/262 (24%), Positives = 115/262 (43%), Gaps = 19/262 (7%)

Query: 54  CHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTP 113
           C++  L  A   W E        ++ ++  M+    K    +  +N+  ++  +      
Sbjct: 546 CNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNS 605

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
            V N ++K H   +GN                    LQ+ + M+   ++P+    + L++
Sbjct: 606 IVYNIIIKAHCQ-NGN----------------VAAALQLLENMKSKGILPNCATYSSLIH 648

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
            +    L +    +  +M + G V N+  Y  LI   CK   +D  E    EM   ++  
Sbjct: 649 GVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHP 708

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           + FTY  +I  YCK G   +A  +  +M+  GI PD+VTYN L +GFC+   M  A ++ 
Sbjct: 709 NKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVC 768

Query: 294 RDI--KGATPNHVTYTTLIDGY 313
             +  +G   + +TYTTL+ G+
Sbjct: 769 DQMATEGLPVDEITYTTLVHGW 790


>gi|388521091|gb|AFK48607.1| unknown [Medicago truncatula]
          Length = 506

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 122/409 (29%), Positives = 200/409 (48%), Gaps = 12/409 (2%)

Query: 171 LLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKD 230
           +L SL K +    V  + ++M   G+  N   +N+LI+  C+   +     +L ++    
Sbjct: 74  ILGSLVKSKHYHTVLSLSQQMEFEGINPNFVTFNILINCFCQLGLIPFAFSVLAKILKMG 133

Query: 231 VRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREAR 290
              D+ T NT I  +C KG  ++AL   D++   G   D V+Y +LI+G C+ G  R A 
Sbjct: 134 YEPDIITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAAL 193

Query: 291 RLFRDIKG--ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
           +L R + G     N V Y T+IDG  +   + +A  L   M AK + P VVTY++++R  
Sbjct: 194 QLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGF 253

Query: 349 CKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ 408
              G+++DA  L N+M  + I PD  T N L++ +CK G    A  V + M+   +  + 
Sbjct: 254 FIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNV 313

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
            T+  L+ GFCK ++M   K +   M+  G  P+  +Y  L+DGYC         K+ + 
Sbjct: 314 STFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNT 373

Query: 469 FVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
              RG+  +V  Y  +I  FCK +KVD A +LF  M    I+ D V Y SL     ++G+
Sbjct: 374 MSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGK 433

Query: 529 PKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGL 577
                 ++++M+ R     +  Y          N IL+   + + D+G+
Sbjct: 434 ISYAFQLVNEMHDRGQPPNIITY----------NSILNALLTKLKDQGI 472



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 89/320 (27%), Positives = 168/320 (52%), Gaps = 16/320 (5%)

Query: 157 RVHNLMPHLHAC--TVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSS 214
           RV   +  L+A     +++ ++KD+  +  + +Y +MV   +  ++  Y+ LI       
Sbjct: 198 RVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVG 257

Query: 215 DVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYN 274
            +     L  +M  ++++ D++T+N L+  +CK+G   +A  V D M  + I P++ T+N
Sbjct: 258 KLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFN 317

Query: 275 SLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAK 332
           +L+ GFC++ +M+E + +F  +  +G  PN VTY +L+DGYC    + +A ++   M+ +
Sbjct: 318 TLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQR 377

Query: 333 GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
           GV   V +YN ++   CK  ++  A +L  EM+ K I PD VT N+LI+  CK G  + A
Sbjct: 378 GVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYA 437

Query: 393 MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
            ++ N M + G   +  TY ++++             LL  + D G  P+  + + L+ G
Sbjct: 438 FQLVNEMHDRGQPPNIITYNSILNA------------LLTKLKDQGIQPNMHTDTILIKG 485

Query: 453 YCNKNNEEALLKLLDEFVSR 472
            C     EA  K+ ++ + +
Sbjct: 486 LCQSGKLEAARKVFEDLLVK 505



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 67/256 (26%), Positives = 131/256 (51%), Gaps = 14/256 (5%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           +D + +F++M + N+ P ++   +L++   K+        V   M+   +  N+  +N L
Sbjct: 260 KDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTL 319

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           +   CK   + + + +   M  + ++ ++ TY +L+  YC      +A  + + M + G+
Sbjct: 320 VDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGV 379

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
           + ++ +YN +I+GFC+  ++ +A +LF ++  K   P+ VTY +LIDG C++  +  A +
Sbjct: 380 TANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQ 439

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           L   M  +G  P ++TYNSIL            N LL ++ ++ I P+  T   LI   C
Sbjct: 440 LVNEMHDRGQPPNIITYNSIL------------NALLTKLKDQGIQPNMHTDTILIKGLC 487

Query: 385 KIGDTASAMKVKNRML 400
           + G   +A KV   +L
Sbjct: 488 QSGKLEAARKVFEDLL 503



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 77/260 (29%), Positives = 121/260 (46%), Gaps = 27/260 (10%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHV 132
           N K  + +   ++    K    K A+N+L+ + ++D     S  N LV      DG    
Sbjct: 273 NIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLV------DG---- 322

Query: 133 LSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMV 192
                 F  + KM ++G  VF  M    + P++     L++     +  +   K++  M 
Sbjct: 323 ------FCKDRKM-KEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMS 375

Query: 193 QLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHY 252
           Q GV AN+H YN++I+  CK   VDK  KL  EM  K +  D+ TYN+LI   CK G   
Sbjct: 376 QRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKIS 435

Query: 253 EALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDG 312
            A  + + M   G  P+I+TYNS+++    +          +D +G  PN  T T LI G
Sbjct: 436 YAFQLVNEMHDRGQPPNIITYNSILNALLTK---------LKD-QGIQPNMHTDTILIKG 485

Query: 313 YCRANDLEEALRLREVMAAK 332
            C++  LE A ++ E +  K
Sbjct: 486 LCQSGKLEAARKVFEDLLVK 505



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/238 (25%), Positives = 106/238 (44%), Gaps = 1/238 (0%)

Query: 302 NHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLL 361
           N + Y+++   +  +ND++ A+ L   +  +        +N IL  L K         L 
Sbjct: 33  NFIPYSSISTTF-HSNDVDGAVSLFNSLLHQNPTLTAFEFNKILGSLVKSKHYHTVLSLS 91

Query: 362 NEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKA 421
            +M  + I P+ VT N LIN +C++G    A  V  ++L+ G   D  T    I GFC  
Sbjct: 92  QQMEFEGINPNFVTFNILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLK 151

Query: 422 KEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVY 481
            ++  A      ++  GF     SY  L++G C      A L+LL     + + ++  +Y
Sbjct: 152 GQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMY 211

Query: 482 RALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
             +I    K + V+ A  L++ M    I  D V Y++L   ++  G+ K   D+ + M
Sbjct: 212 NTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKM 269



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/191 (20%), Positives = 77/191 (40%), Gaps = 3/191 (1%)

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
           D   A+ + N +L     L  F +  ++    K+K       L   M   G +P++ +++
Sbjct: 48  DVDGAVSLFNSLLHQNPTLTAFEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPNFVTFN 107

Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGN 507
            L++ +C          +L + +  G   D+      I+ FC K ++  A    + +   
Sbjct: 108 ILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVAL 167

Query: 508 GILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKD---NEI 564
           G   D V Y +L     + GE +A   +L  +  + + +   +Y +     +KD   N+ 
Sbjct: 168 GFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDA 227

Query: 565 LDLFWSHVVDR 575
            DL+   V  R
Sbjct: 228 FDLYSEMVAKR 238


>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g41170, mitochondrial; Flags: Precursor
 gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
 gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
 gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 527

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 116/360 (32%), Positives = 185/360 (51%), Gaps = 2/360 (0%)

Query: 187 VYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYC 246
           ++  MV+   + +I  +  L++   K    D V  L   ++   V  DL+T N L+  +C
Sbjct: 59  LFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFC 118

Query: 247 KKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHV 304
           +    Y A +   +M + G  PDIVT+ SLI+GFC   RM EA  +   +   G  P+ V
Sbjct: 119 QSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVV 178

Query: 305 TYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM 364
            YTT+ID  C+   +  AL L + M   G+ P VV Y S++  LC  GR RDA+ LL  M
Sbjct: 179 MYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGM 238

Query: 365 NEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEM 424
            ++KI PD +T N LI+A+ K G    A ++ N M+   +  + FTY +LI+GFC    +
Sbjct: 239 TKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCV 298

Query: 425 DIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRAL 484
           D A+++ + M   G  P   +Y+ L++G+C     +  +K+  E   +GL  +   Y  L
Sbjct: 299 DEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTL 358

Query: 485 IRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL 544
           I+ F +  K + AQ +F+ M   G+  +   Y  L +     G+ K    I +DM +R +
Sbjct: 359 IQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREM 418



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 108/414 (26%), Positives = 187/414 (45%), Gaps = 40/414 (9%)

Query: 154 DQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKS 213
           D +++  +   L+ C +L+N   +     +      KM++LG   +I  +  LI+  C  
Sbjct: 96  DHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLG 155

Query: 214 SDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTY 273
           + +++   ++ +M    ++ D+  Y T+I   CK G    AL++ D+ME  GI PD+V Y
Sbjct: 156 NRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMY 215

Query: 274 NSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAA 331
            SL++G C  GR R+A  L R +  +   P+ +T+  LID + +     +A  L   M  
Sbjct: 216 TSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIR 275

Query: 332 KGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTAS 391
             + P + TY S++   C EG + +A ++   M  K   PD V   +LIN +CK      
Sbjct: 276 MSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDD 335

Query: 392 AMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVD 451
           AMK+   M + GL  +  TY  LI GF +  + ++A+E+   M+  G  P+  +Y+ L+ 
Sbjct: 336 AMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLH 395

Query: 452 GYCNKNNEEALLKLLDEFVSR-----------------GLCVDVSVYRALI--------- 485
             C     +  L + ++   R                 GLC +  + +AL+         
Sbjct: 396 CLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKRE 455

Query: 486 ------------RRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
                       +  CK  KV  A  LF  +   G+  + V YT++    +R G
Sbjct: 456 MDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREG 509



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 99/334 (29%), Positives = 167/334 (50%), Gaps = 16/334 (4%)

Query: 259 DRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRA 316
           D ++  G+S D+ T N L++ FC+  +   A      +   G  P+ VT+T+LI+G+C  
Sbjct: 96  DHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLG 155

Query: 317 NDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTC 376
           N +EEA+ +   M   G+ P VV Y +I+  LCK G +  A  L ++M    I PD V  
Sbjct: 156 NRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMY 215

Query: 377 NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD 436
            +L+N  C  G    A  +   M +  +  D  T+ ALI  F K  +   A+EL   M+ 
Sbjct: 216 TSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIR 275

Query: 437 AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDY 496
              +P+  +Y+ L++G+C +   +   ++     ++G   DV  Y +LI  FCK +KVD 
Sbjct: 276 MSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDD 335

Query: 497 AQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSA 556
           A ++F  M   G+ G+++ YT+L   + + G+P    ++   M  R +   ++ Y     
Sbjct: 336 AMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTY----- 390

Query: 557 SYAKDNEILD-LFWSHVVDRGLMSKHIFKEMQLR 589
                N +L  L ++  V + LM   IF++MQ R
Sbjct: 391 -----NVLLHCLCYNGKVKKALM---IFEDMQKR 416



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 91/351 (25%), Positives = 158/351 (45%), Gaps = 56/351 (15%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANL--KMTQDG-----LQVFDQMRVHNLMPHLH 166
           S++N +V++   PD         V+ Y  +   + ++G     L +FDQM  + + P + 
Sbjct: 163 SMVNQMVEMGIKPD---------VVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVV 213

Query: 167 ACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEM 226
             T L+N L           + + M +  +  ++  +N LI A  K       E+L  EM
Sbjct: 214 MYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEM 273

Query: 227 EFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRM 286
               +  ++FTY +LI  +C +G   EA  +   ME +G  PD+V Y SLI+GFC+  ++
Sbjct: 274 IRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKV 333

Query: 287 REARRLFRDI--KGATPNHVTYTTLIDGY------------------------------- 313
            +A ++F ++  KG T N +TYTTLI G+                               
Sbjct: 334 DDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVL 393

Query: 314 ----CRANDLEEALRLREVMAAK---GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
               C    +++AL + E M  +   GV P + TYN +L  LC  G++  A  +  +M +
Sbjct: 394 LHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRK 453

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHG 417
           +++    +T   +I   CK G   +A+ +   +   G+  +  TY  +I G
Sbjct: 454 REMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISG 504



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 71/267 (26%), Positives = 129/267 (48%), Gaps = 7/267 (2%)

Query: 109 FLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHAC 168
           FL    + N ++++   P  N    + L+  +       +  Q+F  M      P + A 
Sbjct: 263 FLDAEELYNEMIRMSIAP--NIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAY 320

Query: 169 TVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEF 228
           T L+N   K +  D   K++ +M Q G+  N   Y  LI    +    +  +++   M  
Sbjct: 321 TSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVS 380

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER---EGISPDIVTYNSLIHGFCREGR 285
           + V  ++ TYN L+   C  G   +AL + + M++   +G++P+I TYN L+HG C  G+
Sbjct: 381 RGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGK 440

Query: 286 MREARRLFRDIKGATPNHVTYTTLI--DGYCRANDLEEALRLREVMAAKGVYPGVVTYNS 343
           + +A  +F D++    +    T  I   G C+A  ++ A+ L   + +KGV P VVTY +
Sbjct: 441 LEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTT 500

Query: 344 ILRKLCKEGRIRDANRLLNEMNEKKIA 370
           ++  L +EG   +A+ L  +M E  ++
Sbjct: 501 MISGLFREGLKHEAHVLFRKMKEDGVS 527



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 108/226 (47%)

Query: 341 YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML 400
           Y  ILR      +  +A  L   M E +  P  +    L+N   K+      + + + + 
Sbjct: 40  YREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQ 99

Query: 401 EAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEE 460
             G+  D +T   L++ FC++ +  +A   L  M+  GF P   +++ L++G+C  N  E
Sbjct: 100 IMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRME 159

Query: 461 ALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLA 520
             + ++++ V  G+  DV +Y  +I   CK   V+YA  LF+ M+  GI  D V+YTSL 
Sbjct: 160 EAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLV 219

Query: 521 YAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
                +G  +    +L  M +R++   +  + +   ++ K+ + LD
Sbjct: 220 NGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLD 265



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 61/276 (22%), Positives = 118/276 (42%), Gaps = 16/276 (5%)

Query: 294 RDIKGATPNHVTYTTLID------GYCRANDL----------EEALRLREVMAAKGVYPG 337
           R +KG +   ++++ L+D       +C   ++           EAL L   M      P 
Sbjct: 12  RLVKGNSGKALSFSRLLDLSFWVRAFCNYREILRNGLHSLQFNEALDLFTHMVESRPLPS 71

Query: 338 VVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKN 397
           ++ +  +L  + K  +      L + +    ++ D  TCN L+N +C+      A     
Sbjct: 72  IIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLG 131

Query: 398 RMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKN 457
           +M++ G   D  T+ +LI+GFC    M+ A  ++  M++ G  P    Y+ ++D  C   
Sbjct: 132 KMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNG 191

Query: 458 NEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYT 517
           +    L L D+  + G+  DV +Y +L+   C   +   A  L   M    I  D + + 
Sbjct: 192 HVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFN 251

Query: 518 SLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRS 553
           +L  A+ + G+     ++ ++M R  +   +  Y S
Sbjct: 252 ALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTS 287


>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 652

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 104/392 (26%), Positives = 212/392 (54%), Gaps = 3/392 (0%)

Query: 146 TQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNV 205
           T+  L +  ++  + + P++     +++S+ K +L +  + ++ +M+  G+  ++  Y+ 
Sbjct: 206 TRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSA 265

Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
           LI   C    ++    L  +M  ++++ D++T+N L+  +CK G   E   V D M ++G
Sbjct: 266 LISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQG 325

Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEAL 323
           I P+ VTYNSL+ G+C    + +A+ +F  +   G  P+  +Y+ +I+G+C+    +EA+
Sbjct: 326 IKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAM 385

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
            L + M  K + P VVTY+S++  L K GRI  A +L+++M+++ + P   T N++++A 
Sbjct: 386 NLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDAL 445

Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY 443
           CKI     A+ +  ++ + G+  + +TY  LI G C++ +++ A+++  G+L  G + + 
Sbjct: 446 CKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNV 505

Query: 444 CSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNL 503
            +Y+ ++ G+C +      L LL +    G   D   Y  +I    KK++ D A++L   
Sbjct: 506 DTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLRE 565

Query: 504 MQGNGILGDSV-IYTSLAYAYWRAGEPKACSD 534
           M   G+    + I+      Y  + EPK  ++
Sbjct: 566 MIARGVRPRQIAIWFQKKKEYDVSSEPKTLTE 597



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 109/363 (30%), Positives = 195/363 (53%), Gaps = 6/363 (1%)

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
           D++ +V   +VQ     N+ +YN +I + CK   V++   L  EM  K +  D+ TY+ L
Sbjct: 211 DLLQRVDGNLVQ----PNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSAL 266

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGA 299
           I+ +C  G   +A+ + ++M  E I PD+ T+N L++ FC++G+M+E + +F  +  +G 
Sbjct: 267 ISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGI 326

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
            PN VTY +L+DGYC   ++ +A  +   MA  GV P + +Y+ ++   CK  +  +A  
Sbjct: 327 KPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMN 386

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
           L  EM+ K I PD VT ++LI+   K G  + A+++ ++M + G+     TY +++   C
Sbjct: 387 LFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALC 446

Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
           K  ++D A  LL  + D G  P+  +YS L+ G C     E   K+ +  + +G  ++V 
Sbjct: 447 KIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVD 506

Query: 480 VYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
            Y  +I+ FC +   + A  L + M+ NG + D+  Y  +  + ++  E      +L +M
Sbjct: 507 TYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREM 566

Query: 540 YRR 542
             R
Sbjct: 567 IAR 569



 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 110/365 (30%), Positives = 188/365 (51%), Gaps = 4/365 (1%)

Query: 203 YNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRME 262
           +N ++ +  KS     V  L  +MEF+ ++ +L   N LI  +C+ G+   A +V  ++ 
Sbjct: 88  FNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKIL 147

Query: 263 REGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGATPNH---VTYTTLIDGYCRANDL 319
           + G  PD +T+ +LI G C +G++++A  LF D   A   H   ++Y TLI G C+  + 
Sbjct: 148 KMGYVPDTITFTTLIKGLCLKGQIQQAF-LFHDKVVALGFHFDQISYGTLIHGLCKVGET 206

Query: 320 EEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTL 379
             AL L + +    V P VV YN+I+  +CK   + +A  L +EM  K I+PD VT + L
Sbjct: 207 RAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSAL 266

Query: 380 INAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGF 439
           I+ +C +G    A+ + N+M+   +  D +T+  L++ FCK  +M   K +   M+  G 
Sbjct: 267 ISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGI 326

Query: 440 SPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQR 499
            P++ +Y+ L+DGYC          + +     G+  D+  Y  +I  FCK +K D A  
Sbjct: 327 KPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMN 386

Query: 500 LFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYA 559
           LF  M    I+ D V Y+SL     ++G       ++D M+ R +  T++ Y S   +  
Sbjct: 387 LFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALC 446

Query: 560 KDNEI 564
           K +++
Sbjct: 447 KIHQV 451



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 104/376 (27%), Positives = 186/376 (49%), Gaps = 2/376 (0%)

Query: 155 QMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSS 214
           +M    + P+L  C +L+N   +  L    + V+ K++++G V +   +  LI   C   
Sbjct: 110 KMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKG 169

Query: 215 DVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYN 274
            + +      ++       D  +Y TLI   CK G    AL +  R++   + P++V YN
Sbjct: 170 QIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYN 229

Query: 275 SLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAK 332
           ++I   C+   + EA  LF ++  KG +P+ VTY+ LI G+C    L +A+ L   M  +
Sbjct: 230 TIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILE 289

Query: 333 GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
            + P V T+N ++   CK+G++++   + + M ++ I P+ VT N+L++ YC + +   A
Sbjct: 290 NIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKA 349

Query: 393 MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
             + N M + G+  D  +Y  +I+GFCK K+ D A  L   M      P   +YS L+DG
Sbjct: 350 KSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDG 409

Query: 453 YCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGD 512
                     L+L+D+   RG+   +  Y +++   CK  +VD A  L   ++  GI  +
Sbjct: 410 LSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPN 469

Query: 513 SVIYTSLAYAYWRAGE 528
              Y+ L     ++G+
Sbjct: 470 MYTYSILIKGLCQSGK 485



 Score = 45.8 bits (107), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 40/193 (20%), Positives = 77/193 (39%), Gaps = 4/193 (2%)

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
           D   A+ + NR+L        F +  ++    K+K       L   M   G  P+  + +
Sbjct: 65  DVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCN 124

Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGN 507
            L++ +C          +  + +  G   D   +  LI+  C K ++  A    + +   
Sbjct: 125 ILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVAL 184

Query: 508 GILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAK---DNEI 564
           G   D + Y +L +   + GE +A  D+L  +    +   + +Y +   S  K    NE 
Sbjct: 185 GFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEA 244

Query: 565 LDLFWSHVVDRGL 577
            DLF S ++ +G+
Sbjct: 245 FDLF-SEMISKGI 256


>gi|242067038|ref|XP_002454808.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
 gi|241934639|gb|EES07784.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
          Length = 951

 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 116/371 (31%), Positives = 195/371 (52%), Gaps = 4/371 (1%)

Query: 187 VYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYC 246
           V ++M   GV  ++  YN L+     S D D   +++  M+   V  ++ TY  LI  YC
Sbjct: 209 VVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVVERMKADGVEPNVVTYTALIGEYC 268

Query: 247 K-KGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNH 303
           K KGM  EA ++ + M R G+ PD+VT ++L+ G CR+G+  EA  LFR++   G  PNH
Sbjct: 269 KGKGMD-EAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSEAYALFREMDKIGVAPNH 327

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
           VTY TLID   +A    E+L L   M ++GV   +V Y +++ +L KEG+I +A  +L  
Sbjct: 328 VTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRH 387

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
                I P+ VT   L++A+C+ G+   A +V  +M E  ++ +  T+ ++I+G  K   
Sbjct: 388 AQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGC 447

Query: 424 MDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRA 483
           +  A + +  M D+G +P+  +Y  L+DG+     +EA L +  + +  G+  +  V  +
Sbjct: 448 LGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDS 507

Query: 484 LIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRR 543
           L+    K   ++ A+ LF  M   G+L D V YT+L    ++ G   A   +  ++  + 
Sbjct: 508 LVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKN 567

Query: 544 LMITLKIYRSF 554
           L     +Y  F
Sbjct: 568 LSPDAVVYNVF 578



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 121/439 (27%), Positives = 206/439 (46%), Gaps = 14/439 (3%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           L+V ++M+   + P++   T L+    K +  D  + +Y+ MV+ GV+ ++   + L+  
Sbjct: 242 LEVVERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDG 301

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
            C+     +   L  EM+   V  +  TY TLI    K     E+L +   M   G+  D
Sbjct: 302 LCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMD 361

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDIKG--ATPNHVTYTTLIDGYCRANDLEEALRLRE 327
           +V Y +L+    +EG++ EA+ + R  +    TPN VTYT L+D +CRA +++ A ++  
Sbjct: 362 LVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLL 421

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
            M  K V P VVT++SI+  L K G +  A   + +M +  IAP+ VT  TLI+ + K  
Sbjct: 422 QMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQ 481

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
              +A+ V   ML  G+  + F   +L++G  K   ++ A+ L   M + G    + +Y+
Sbjct: 482 GQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYT 541

Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGN 507
            L+DG     N  A  K+  E + + L  D  VY   I   C   K   A+     M+  
Sbjct: 542 TLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNT 601

Query: 508 GILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDL 567
           G+  D   Y ++  A  R G+      +L +M R  +   L  Y +          ++ L
Sbjct: 602 GLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTL---------VVGL 652

Query: 568 FWSHVVDRGLMSKHIFKEM 586
             + VV +   +K +  EM
Sbjct: 653 LEAGVVKK---AKFLLNEM 668



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 111/397 (27%), Positives = 193/397 (48%), Gaps = 2/397 (0%)

Query: 122 IHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLT 181
           +H+  + N+ V+  LV         +    +F  M    L+      T L++ L K    
Sbjct: 494 LHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNM 553

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
              +KV +++++  +  +  +YNV I+  C      + +  L EM    +  D  TYNT+
Sbjct: 554 PAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTM 613

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GA 299
           IA  C++G   +AL +   M+R  I P+++TY +L+ G    G +++A+ L  ++   G 
Sbjct: 614 IAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGF 673

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
            P  +T+  ++     +   +  L + E+M   G++  +  YN+++  LC  G  R+A  
Sbjct: 674 APTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATV 733

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
           +L+EM  + IAPD +T N LI  +CK     +A  +  +ML  GL  +  T+  L+ G  
Sbjct: 734 VLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLE 793

Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
            A  +  A  +L  M   G  P+  +Y  LV GY  K+N+   L+L  E VS+G     S
Sbjct: 794 SAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKAS 853

Query: 480 VYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIY 516
            Y +L+  F K   ++ A+ LF+ M+  G+L  S  Y
Sbjct: 854 TYNSLMSDFAKAGMMNQAKELFSEMKRRGVLHTSSTY 890



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/428 (25%), Positives = 195/428 (45%), Gaps = 37/428 (8%)

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           L+   A  +   + L +  +M    ++  L   T L++ L K+   +    V +      
Sbjct: 333 LIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDN 392

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
           +  N   Y VL+ A C++ ++D  E++L +ME K V  ++ T++++I    K+G   +A 
Sbjct: 393 ITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAA 452

Query: 256 AVQDRMEREGISPDIVTYNSLIHGFCR--------------------------------- 282
               +M+  GI+P++VTY +LI GF +                                 
Sbjct: 453 DYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGL 512

Query: 283 --EGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGV 338
              G +  A  LF+D+  +G   +HV YTTL+DG  +  ++  A ++ + +  K + P  
Sbjct: 513 RKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDA 572

Query: 339 VTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNR 398
           V YN  +  LC  G+  +A   L EM    + PD  T NT+I A C+ G T+ A+K+   
Sbjct: 573 VVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKE 632

Query: 399 MLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNN 458
           M    +  +  TY  L+ G  +A  +  AK LL  M  AGF+P+  ++  ++        
Sbjct: 633 MKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRR 692

Query: 459 EEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTS 518
            + +L++ +  +  GL  D++VY  L+   C       A  + + M   GI  D++ + +
Sbjct: 693 PDVILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNA 752

Query: 519 LAYAYWRA 526
           L   + ++
Sbjct: 753 LILGHCKS 760



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 111/434 (25%), Positives = 191/434 (44%), Gaps = 37/434 (8%)

Query: 155 QMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSS 214
           +M+   + P++     L++   K +  +    VY+ M+  GV AN  + + L++   K+ 
Sbjct: 457 KMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNG 516

Query: 215 DVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYN 274
           +++  E L  +M+ + +  D   Y TL+    K G    A  V   +  + +SPD V YN
Sbjct: 517 NIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYN 576

Query: 275 SLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAK 332
             I+  C  G+  EA+   ++++  G  P+  TY T+I   CR     +AL+L + M   
Sbjct: 577 VFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRN 636

Query: 333 GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVT-------C--------- 376
            + P ++TY +++  L + G ++ A  LLNEM     AP ++T       C         
Sbjct: 637 SIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVI 696

Query: 377 -------------------NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHG 417
                              NTL++  C  G   +A  V + ML  G+  D  T+ ALI G
Sbjct: 697 LEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILG 756

Query: 418 FCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVD 477
            CK+  +D A  +   ML  G SP+  +++ L+ G  +         +L +    GL  +
Sbjct: 757 HCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPN 816

Query: 478 VSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILD 537
              Y  L+  + KK     A RL+  M   G +  +  Y SL   + +AG      ++  
Sbjct: 817 NLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKELFS 876

Query: 538 DMYRRRLMITLKIY 551
           +M RR ++ T   Y
Sbjct: 877 EMKRRGVLHTSSTY 890



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 101/330 (30%), Positives = 155/330 (46%), Gaps = 8/330 (2%)

Query: 231 VRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREAR 290
           V AD  +YN  +A   ++G    A  V   M + G+S D VT ++ + G CR G + EA 
Sbjct: 111 VAADTVSYNIFLAALSEQGHGRLAPPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAA 170

Query: 291 RLF------RDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSI 344
            L       R I G   + V +  LIDGYC+  D+  AL + E M  +GV   VV YNS+
Sbjct: 171 ALAEMLVRGRGIDGL--DVVGWNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSL 228

Query: 345 LRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGL 404
           +      G    A  ++  M    + P+ VT   LI  YCK      A  +   M+ +G+
Sbjct: 229 VAGFFHSGDADAALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGV 288

Query: 405 MLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLK 464
           + D  T  AL+ G C+  +   A  L   M   G +P++ +Y  L+D           L 
Sbjct: 289 LPDVVTLSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLG 348

Query: 465 LLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYW 524
           LL E VSRG+ +D+ +Y AL+ R  K+ K++ A+ +    Q + I  + V YT L  A+ 
Sbjct: 349 LLGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHC 408

Query: 525 RAGEPKACSDILDDMYRRRLMITLKIYRSF 554
           RAG       +L  M  + ++  +  + S 
Sbjct: 409 RAGNIDGAEQVLLQMEEKSVIPNVVTFSSI 438



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 105/418 (25%), Positives = 185/418 (44%), Gaps = 2/418 (0%)

Query: 124 DDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDM 183
           D  + N    + L+  Y   K   +   +++ M    ++P +   + L++ L +D     
Sbjct: 251 DGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSE 310

Query: 184 VWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIA 243
            + ++++M ++GV  N   Y  LI +  K+    +   LL EM  + V  DL  Y  L+ 
Sbjct: 311 AYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMD 370

Query: 244 LYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATP 301
              K+G   EA  V    + + I+P+ VTY  L+   CR G +  A ++   +  K   P
Sbjct: 371 RLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIP 430

Query: 302 NHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLL 361
           N VT++++I+G  +   L +A      M   G+ P VVTY +++    K      A  + 
Sbjct: 431 NVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVY 490

Query: 362 NEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKA 421
            +M  + +  +N   ++L+N   K G+   A  +   M E GL+LD   Y  L+ G  K 
Sbjct: 491 RDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKT 550

Query: 422 KEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVY 481
             M  A ++   +++   SP    Y+  ++  C           L E  + GL  D + Y
Sbjct: 551 GNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATY 610

Query: 482 RALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
             +I   C++ K   A +L   M+ N I  + + YT+L      AG  K    +L++M
Sbjct: 611 NTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEM 668



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 117/494 (23%), Positives = 211/494 (42%), Gaps = 72/494 (14%)

Query: 62  AFFKWA--ESAVPNYKHSLQSHW--------TMIHILTKNKHFKSAQ----NMLEKIALR 107
            FFK+   E+A+  Y+  L            ++++ L KN + + A+    +M E+  L 
Sbjct: 476 GFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLL 535

Query: 108 DFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHA 167
           D ++  ++++ L K  + P              A  K+ Q+ ++        NL P    
Sbjct: 536 DHVNYTTLMDGLFKTGNMP--------------AAFKVGQELME-------KNLSPDAVV 574

Query: 168 CTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEME 227
             V +N L             K+M   G+  +   YN +I A C+     K  KLL EM+
Sbjct: 575 YNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMK 634

Query: 228 FKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISP------------------- 268
              ++ +L TY TL+    + G+  +A  + + M   G +P                   
Sbjct: 635 RNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPD 694

Query: 269 ----------------DIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLI 310
                           DI  YN+L+H  C  G  R A  +  ++  +G  P+ +T+  LI
Sbjct: 695 VILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALI 754

Query: 311 DGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIA 370
            G+C+++ L+ A  +   M  +G+ P + T+N++L  L   GRI +A+ +L++M +  + 
Sbjct: 755 LGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLE 814

Query: 371 PDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL 430
           P+N+T + L+  Y K  +   A+++   M+  G +    TY +L+  F KA  M+ AKEL
Sbjct: 815 PNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKEL 874

Query: 431 LFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCK 490
              M   G   +  +Y  L++G+    N   +  LL +    G         ++ R F +
Sbjct: 875 FSEMKRRGVLHTSSTYDILLNGWSKLRNGIEVRILLKDMKELGFKPSKGTISSMSRAFSR 934

Query: 491 KEKVDYAQRLFNLM 504
                 A+RL   +
Sbjct: 935 PGMTGEARRLLKTL 948



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 86/343 (25%), Positives = 144/343 (41%), Gaps = 39/343 (11%)

Query: 228 FKDVRADLFTYNTLIALYCKKGMHYEALAV----QDRMEREGISPDIVTYNSLIHGFCRE 283
           F+ V  D  T N++I  YC       AL++         +  ++ D V+YN  +     +
Sbjct: 69  FRPVPGDTLTLNSIILSYCSLRSLRPALSLLRSSSGPQSQSQVAADTVSYNIFLAALSEQ 128

Query: 284 GRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTY 341
           G  R A  +  ++  +G + + VT +T + G CR   + EA  L E++            
Sbjct: 129 GHGRLAPPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAAALAEMLV----------- 177

Query: 342 NSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLE 401
                      R R  + L           D V  N LI+ YCK+ D A+A+ V  RM  
Sbjct: 178 -----------RGRGIDGL-----------DVVGWNALIDGYCKVQDMAAALAVVERMTT 215

Query: 402 AGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEA 461
            G+ LD   Y +L+ GF  + + D A E++  M   G  P+  +Y+ L+  YC     + 
Sbjct: 216 QGVALDVVGYNSLVAGFFHSGDADAALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDE 275

Query: 462 LLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAY 521
              L +  V  G+  DV    AL+   C+  +   A  LF  M   G+  + V Y +L  
Sbjct: 276 AFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLID 335

Query: 522 AYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
           +  +A        +L +M  R +++ L +Y +      K+ +I
Sbjct: 336 SLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDRLGKEGKI 378



 Score = 45.8 bits (107), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 47/223 (21%), Positives = 91/223 (40%), Gaps = 14/223 (6%)

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKV----KNRMLEAGLMLDQFTYKALIHGFCKAK 422
           + +  D +T N++I +YC +     A+ +         ++ +  D  +Y   +    +  
Sbjct: 70  RPVPGDTLTLNSIILSYCSLRSLRPALSLLRSSSGPQSQSQVAADTVSYNIFLAALSEQG 129

Query: 423 EMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKN--NEEALLKLLDEFVSRGLCVD--- 477
              +A  +L  M   G S    + S  + G C      E A L    E + RG  +D   
Sbjct: 130 HGRLAPPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAAALA---EMLVRGRGIDGLD 186

Query: 478 VSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILD 537
           V  + ALI  +CK + +  A  +   M   G+  D V Y SL   ++ +G+  A  ++++
Sbjct: 187 VVGWNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVVE 246

Query: 538 DMYRRRLMITLKIYRSFSASYAKDNEILDLF--WSHVVDRGLM 578
            M    +   +  Y +    Y K   + + F  +  +V  G++
Sbjct: 247 RMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVL 289


>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Glycine max]
          Length = 756

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 139/485 (28%), Positives = 232/485 (47%), Gaps = 22/485 (4%)

Query: 58  SLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLN 117
           S + + F+WA SA PNY     +H ++ H             +L ++A     S  S+L 
Sbjct: 73  SSALSLFQWA-SAQPNYS----AHPSVFH------------ELLRQLARAG--SFDSMLT 113

Query: 118 ALVKIHDD--PDGNSHVLSWLVIFYANLKMTQDGLQVFDQM-RVHNLMPHLHACTVLLNS 174
            L ++H    P   S  L +L  +  +  +  +   +F  M R   + P      V L+ 
Sbjct: 114 LLRQMHSSKIPVDESTFLIFLETYATSHHLHAEINPLFLLMERDFAVKPDTRFYNVALSL 173

Query: 175 LAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRAD 234
           L K     +V  ++ KMV   V  ++  +N+LI A CK+  +     +L +M    +R D
Sbjct: 174 LVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQLRPAILMLEDMPNYGLRPD 233

Query: 235 LFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR 294
             T+ TL+  + ++     AL +++ M   G     V+ N L++G C+EGR+ EA R   
Sbjct: 234 EKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGLCKEGRIEEALRFIY 293

Query: 295 DIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRI 354
           + +G  P+ VT+  L++G CR   +++ L + + M  KG    V TYNS++  LCK G I
Sbjct: 294 EEEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEI 353

Query: 355 RDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKAL 414
            +A  +L+ M  +   P+ VT NTLI   CK     +A ++   +   G++ D  T+ +L
Sbjct: 354 DEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSL 413

Query: 415 IHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGL 474
           I G C     +IA EL   M + G  P   +YS L++  C++   +  L LL E    G 
Sbjct: 414 IQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGC 473

Query: 475 CVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSD 534
             +V VY  LI   CK  +V  A+ +F+ M+  G+   SV Y +L     ++   +  + 
Sbjct: 474 ARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQ 533

Query: 535 ILDDM 539
           ++D M
Sbjct: 534 LMDQM 538



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 111/362 (30%), Positives = 177/362 (48%), Gaps = 4/362 (1%)

Query: 171 LLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKD 230
           L+N L +        ++   M++ G   +++ YN LI   CK  ++D+  ++L  M  +D
Sbjct: 308 LVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRD 367

Query: 231 VRADLFTYNTLIALYCKKGMHYEALAVQDR-MEREGISPDIVTYNSLIHGFCREGRMREA 289
              +  TYNTLI   CK+  H EA     R +  +G+ PD+ T+NSLI G C       A
Sbjct: 368 CEPNTVTYNTLIGTLCKEN-HVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIA 426

Query: 290 RRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRK 347
             LF ++K  G  P+  TY+ LI+  C    L+EAL L + M   G    VV YN+++  
Sbjct: 427 MELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDG 486

Query: 348 LCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLD 407
           LCK  R+ DA  + ++M    ++  +VT NTLIN  CK      A ++ ++M+  GL  D
Sbjct: 487 LCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPD 546

Query: 408 QFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLD 467
           +FTY  ++  FC+  ++  A +++  M   G  P   +Y  L+ G C     +   KLL 
Sbjct: 547 KFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLR 606

Query: 468 EFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
               +G+ +    Y  +I+  CK+++   A RLF  M   G   D + Y  +       G
Sbjct: 607 SVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKGDPPDVITYKIVFRGLCNGG 666

Query: 528 EP 529
            P
Sbjct: 667 GP 668



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 114/402 (28%), Positives = 186/402 (46%), Gaps = 4/402 (0%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           + + M  + L P     T L+    ++   +   ++ + MV+ G        NVL++  C
Sbjct: 221 MLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGLC 280

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           K   +++  + + E E      D  T+N L+   C+ G   + L + D M  +G   D+ 
Sbjct: 281 KEGRIEEALRFIYEEE--GFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVY 338

Query: 272 TYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           TYNSLI G C+ G + EA  +   +  +   PN VTY TLI   C+ N +E A  L  V+
Sbjct: 339 TYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVL 398

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
            +KGV P V T+NS+++ LC       A  L  EM EK   PD  T + LI + C     
Sbjct: 399 TSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRL 458

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
             A+ +   M  +G   +   Y  LI G CK   +  A+++   M   G S S  +Y+ L
Sbjct: 459 KEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTL 518

Query: 450 VDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGI 509
           ++G C     E   +L+D+ +  GL  D   Y  +++ FC++  +  A  +   M  NG 
Sbjct: 519 INGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGC 578

Query: 510 LGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIY 551
             D V Y +L     +AG     S +L  +  + +++T + Y
Sbjct: 579 EPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAY 620



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 116/418 (27%), Positives = 202/418 (48%), Gaps = 11/418 (2%)

Query: 170 VLLNSLAKD-RLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEF 228
           VL+N L K+ R+ + +  +Y+   + G   +   +N L++  C++  + +  +++  M  
Sbjct: 274 VLVNGLCKEGRIEEALRFIYE---EEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLE 330

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
           K    D++TYN+LI+  CK G   EA+ +   M      P+ VTYN+LI   C+E  +  
Sbjct: 331 KGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEA 390

Query: 289 ARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILR 346
           A  L R +  KG  P+  T+ +LI G C  ++ E A+ L E M  KG  P   TY+ ++ 
Sbjct: 391 ATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIE 450

Query: 347 KLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLML 406
            LC E R+++A  LL EM     A + V  NTLI+  CK      A  + ++M   G+  
Sbjct: 451 SLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSR 510

Query: 407 DQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLL 466
              TY  LI+G CK+K ++ A +L+  M+  G  P   +Y+ ++  +C + + +    ++
Sbjct: 511 SSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIV 570

Query: 467 DEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRA 526
                 G   D+  Y  LI   CK  +VD A +L   +Q  G++     Y  +  A  + 
Sbjct: 571 QNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKR 630

Query: 527 GEPKACSDILDDMYRR---RLMITLKI-YRSFSASYAKDNEILDLFWSHVVDRGLMSK 580
              K    +  +M  +     +IT KI +R          E +D F   ++++G++ +
Sbjct: 631 KRTKEAMRLFREMMEKGDPPDVITYKIVFRGLCNGGGPIQEAVD-FTVEMLEKGILPE 687



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 99/341 (29%), Positives = 173/341 (50%), Gaps = 5/341 (1%)

Query: 160 NLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKV 219
            ++P +     L+  L      ++  +++++M + G   +   Y++LI + C    + + 
Sbjct: 402 GVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEA 461

Query: 220 EKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHG 279
             LL EME      ++  YNTLI   CK     +A  + D+ME  G+S   VTYN+LI+G
Sbjct: 462 LMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLING 521

Query: 280 FCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPG 337
            C+  R+ EA +L   +  +G  P+  TYTT++  +C+  D++ A  + + M   G  P 
Sbjct: 522 LCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPD 581

Query: 338 VVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKN 397
           +VTY +++  LCK GR+  A++LL  +  K +       N +I A CK   T  AM++  
Sbjct: 582 IVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFR 641

Query: 398 RMLEAGLMLDQFTYKALIHGFCKAK-EMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNK 456
            M+E G   D  TYK +  G C     +  A +    ML+ G  P + S+ +L +G C+ 
Sbjct: 642 EMMEKGDPPDVITYKIVFRGLCNGGGPIQEAVDFTVEMLEKGILPEFPSFGFLAEGLCSL 701

Query: 457 NNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYA 497
           + E+ L++L++  + +G         ++IR F K +K + A
Sbjct: 702 SMEDTLIQLINMVMEKGRFSQSET--SIIRGFLKIQKFNDA 740



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 100/380 (26%), Positives = 173/380 (45%), Gaps = 27/380 (7%)

Query: 80  SHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVK------------------ 121
           ++ T+I  L K  H ++A  +   +  +  L      N+L++                  
Sbjct: 374 TYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEM 433

Query: 122 --IHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDR 179
                DPD  ++  S L+    + +  ++ L +  +M +     ++     L++ L K+ 
Sbjct: 434 KEKGCDPDEFTY--SILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNN 491

Query: 180 LTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYN 239
                  ++ +M  LGV  +   YN LI+  CKS  V++  +L+ +M  + ++ D FTY 
Sbjct: 492 RVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYT 551

Query: 240 TLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--K 297
           T++  +C++G    A  +   M   G  PDIVTY +LI G C+ GR+  A +L R +  K
Sbjct: 552 TMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMK 611

Query: 298 GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK-EGRIRD 356
           G       Y  +I   C+    +EA+RL   M  KG  P V+TY  + R LC   G I++
Sbjct: 612 GMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKGDPPDVITYKIVFRGLCNGGGPIQE 671

Query: 357 ANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIH 416
           A     EM EK I P+  +   L    C +    + +++ N ++E G      T  ++I 
Sbjct: 672 AVDFTVEMLEKGILPEFPSFGFLAEGLCSLSMEDTLIQLINMVMEKGRFSQSET--SIIR 729

Query: 417 GFCKAKEMDIAKELLFGMLD 436
           GF K ++ + A   L  +LD
Sbjct: 730 GFLKIQKFNDALANLGAILD 749


>gi|224130936|ref|XP_002320961.1| predicted protein [Populus trichocarpa]
 gi|222861734|gb|EEE99276.1| predicted protein [Populus trichocarpa]
          Length = 474

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 116/360 (32%), Positives = 189/360 (52%), Gaps = 3/360 (0%)

Query: 131 HVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKK 190
           H LS L+  + +L     GL V  ++    L P +   T LLN L  +   D V  +Y  
Sbjct: 98  HSLSILINCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDD 157

Query: 191 MVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGM 250
           M+  G+  N++ YNV+I++  KS   ++    L +ME      ++  Y+TLI  YC +G 
Sbjct: 158 MLVRGLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQ 217

Query: 251 HYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTT 308
             EA +V D M  +G +P++ TY SL++G+C+  R+ EA +L  +   KG  P+ VT+TT
Sbjct: 218 MDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTT 277

Query: 309 LIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKK 368
           +I G CRA     A +L   + A G  P ++TY  +L  LCK G + +A  L  EM    
Sbjct: 278 IISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRST 337

Query: 369 IAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAK 428
           + P+ V    LI++ CK G      ++ +R+++ GL  + +TY AL+   CK   +  A 
Sbjct: 338 VKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAH 397

Query: 429 ELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRF 488
           +L   M + G +P  C+Y+ ++ G+    +     +L++E V+RG   D +  RAL+  F
Sbjct: 398 KLFRKMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEMVNRGFSADAAT-RALLNDF 456



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 113/401 (28%), Positives = 197/401 (49%), Gaps = 10/401 (2%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D L  F  M +   +P +   + L +S+ +    + V  + K++  LG+  +IH  ++LI
Sbjct: 45  DALASFRLMLLRKPLPCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSILI 104

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           +  C    VD    +L ++    +   + T+ TL+   C +G   + + + D M   G+ 
Sbjct: 105 NCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQ 164

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRL 325
           P++ TYN +I+   + G+  EA    + ++  G  PN V Y+TLIDGYC    ++EA  +
Sbjct: 165 PNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSV 224

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
            ++M +KG  P V TY S++   CK  RI +A +LL+E   K + PD VT  T+I+  C+
Sbjct: 225 FDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCR 284

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            G   +A ++   +   G   +  TY  L+ G CK   ++ A  L   M  +   P+   
Sbjct: 285 AGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVI 344

Query: 446 YSWLVDGYCN----KNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
           Y+ L+D  C     K+ +E   +L+DE    GL  +V  Y AL+   CK+  +  A +LF
Sbjct: 345 YTILIDSLCKCGKIKDGKELFSRLIDE----GLKPNVYTYTALVGALCKEGLIIEAHKLF 400

Query: 502 NLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRR 542
             M+ +G   D   Y  +   + +  +P     ++++M  R
Sbjct: 401 RKMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEMVNR 441



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 87/319 (27%), Positives = 153/319 (47%), Gaps = 3/319 (0%)

Query: 251 HYEALA-VQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYT 307
           HYE +  +   +E  GI  DI + + LI+ FC   R+     +   I   G  P+ VT+T
Sbjct: 77  HYETVVYLSKEIEFLGIEQDIHSLSILINCFCHLHRVDFGLSVLSKILKLGLEPSIVTFT 136

Query: 308 TLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEK 367
           TL++G C    +++ + L + M  +G+ P V TYN I+  L K G+  +A   L +M + 
Sbjct: 137 TLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKV 196

Query: 368 KIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIA 427
              P+ V  +TLI+ YC  G    A  V + M+  G   + +TY +L++G+CK + ++ A
Sbjct: 197 GCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEA 256

Query: 428 KELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRR 487
            +LL   L  G  P   +++ ++ G C      A  +L     + G   ++  Y  L+  
Sbjct: 257 VQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDG 316

Query: 488 FCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMIT 547
            CK   ++ A  LF  MQ + +  + VIYT L  +  + G+ K   ++   +    L   
Sbjct: 317 LCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPN 376

Query: 548 LKIYRSFSASYAKDNEILD 566
           +  Y +   +  K+  I++
Sbjct: 377 VYTYTALVGALCKEGLIIE 395



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 58/254 (22%), Positives = 104/254 (40%), Gaps = 35/254 (13%)

Query: 318 DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCN 377
           D ++AL    +M  +   P +V ++ +   + + G       L  E+    I  D  + +
Sbjct: 42  DKDDALASFRLMLLRKPLPCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLS 101

Query: 378 TLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA 437
            LIN +C +      + V +++L+ GL     T+  L++G C   +MD    L   ML  
Sbjct: 102 ILINCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVR 161

Query: 438 GFS-----------------------------------PSYCSYSWLVDGYCNKNNEEAL 462
           G                                     P+  +YS L+DGYC +   +  
Sbjct: 162 GLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEA 221

Query: 463 LKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYA 522
             + D  VS+G   +V  Y +L+  +CK E+++ A +L +     G++ D V +T++   
Sbjct: 222 RSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISG 281

Query: 523 YWRAGEPKACSDIL 536
             RAG P A   + 
Sbjct: 282 LCRAGRPLAAQQLF 295



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/198 (22%), Positives = 84/198 (42%)

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
           +K  P  V  + L ++  ++G   + + +   +   G+  D  +   LI+ FC    +D 
Sbjct: 56  RKPLPCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSILINCFCHLHRVDF 115

Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
              +L  +L  G  PS  +++ L++G C +   + ++ L D+ + RGL  +V  Y  +I 
Sbjct: 116 GLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIIN 175

Query: 487 RFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMI 546
              K  K + A      M+  G + + V Y++L   Y   G+      + D M  +    
Sbjct: 176 SLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTP 235

Query: 547 TLKIYRSFSASYAKDNEI 564
            +  Y S    Y K   I
Sbjct: 236 NVYTYTSLMNGYCKIERI 253


>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
          Length = 814

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 121/402 (30%), Positives = 196/402 (48%), Gaps = 37/402 (9%)

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
           P + A + +++   K+   +    ++K+MVQ G+  +   Y+ ++HA CK+  +DK E  
Sbjct: 217 PDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAF 276

Query: 223 LCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR 282
           L +M  K V  + +TYN LI  Y   G   EA+ V   M R  I PD+VT + L+   C+
Sbjct: 277 LRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCK 336

Query: 283 EGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVT 340
            G+++EAR +F  +  KG  PN  +YT +++GY     L +   L ++M   G+ P + T
Sbjct: 337 YGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYT 396

Query: 341 YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML 400
           +N +++     G +  A  + NEM +  + PD VT  T+I A C+IG    AM+  N+M+
Sbjct: 397 FNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMI 456

Query: 401 EAGLMLDQFTYKALIHGFCKAKEMDIAKELLF-----GM--------------------- 434
           + G+  D++ Y  LI GFC    +  AKEL+      GM                     
Sbjct: 457 DQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVM 516

Query: 435 ---------LDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
                    ++ G  P+   YS L+DGYC     E  L++ D  VS G+  +  VY  L+
Sbjct: 517 DAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLV 576

Query: 486 RRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
             +CK  ++D    LF  M   GI   +++Y  +    + AG
Sbjct: 577 NGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAG 618



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 120/429 (27%), Positives = 206/429 (48%), Gaps = 16/429 (3%)

Query: 162 MPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVV--ANIHLYNVLIHACCKSSDVDKV 219
           +P + + ++LL SL     +     + + M + G V   ++  Y+ +I    K  DV+K 
Sbjct: 179 VPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKA 238

Query: 220 EKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHG 279
             L  EM  + +  D  TY++++   CK     +A A   +M  +G+ P+  TYN+LI+G
Sbjct: 239 CDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYG 298

Query: 280 FCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPG 337
           +   G+ +EA R+F++++     P+ VT + L+   C+   ++EA  + + MA KG  P 
Sbjct: 299 YSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPN 358

Query: 338 VVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKN 397
           V +Y  +L     +G + D   L + M    IAPD  T N LI AY   G    AM + N
Sbjct: 359 VFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFN 418

Query: 398 RMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKN 457
            M + G+  D  TY+ +I   C+  +MD A E    M+D G +P   +Y  L+ G+C   
Sbjct: 419 EMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHG 478

Query: 458 NEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYT 517
           +     +L+ E ++ G+ +D+  + ++I   CK  +V  AQ +F+L    G+   +V+Y+
Sbjct: 479 SLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYS 538

Query: 518 SLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGL 577
            L   Y   G+ +    + D M    +     +Y +    Y K   I         D GL
Sbjct: 539 MLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRI---------DEGL 589

Query: 578 MSKHIFKEM 586
               +F+EM
Sbjct: 590 ---SLFREM 595



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 122/499 (24%), Positives = 224/499 (44%), Gaps = 19/499 (3%)

Query: 91  NKHFKSAQNMLEKIALRDFLSTPSVLNALVKIH--DDPDG------NSHVL--SW----L 136
           NK     + M+++    DF++  SV++AL K    D  +       N  VL  +W    L
Sbjct: 236 NKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNL 295

Query: 137 VIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGV 196
           +  Y++    ++ ++VF +MR H+++P +   ++L+ SL K         V+  M   G 
Sbjct: 296 IYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQ 355

Query: 197 VANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALA 256
             N+  Y ++++       +  +  L   M    +  D++T+N LI  Y   GM  +A+ 
Sbjct: 356 NPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMI 415

Query: 257 VQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYC 314
           + + M   G+ PD+VTY ++I   CR G+M +A   F  +  +G  P+   Y  LI G+C
Sbjct: 416 IFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFC 475

Query: 315 RANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNV 374
               L +A  L   +   G++  +V ++SI+  LCK GR+ DA  + +      + P  V
Sbjct: 476 THGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAV 535

Query: 375 TCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGM 434
             + L++ YC +G    A++V + M+ AG+  +   Y  L++G+CK   +D    L   M
Sbjct: 536 VYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREM 595

Query: 435 LDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKV 494
           L  G  PS   Y+ ++DG               E    G+ ++   Y  ++R   K    
Sbjct: 596 LQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCF 655

Query: 495 DYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSF 554
           D A  LF  ++   +  + +   ++    ++    +   D+   + R  L+  +  Y   
Sbjct: 656 DEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIM 715

Query: 555 SASYAKDN---EILDLFWS 570
             +  K+    E  D+F S
Sbjct: 716 ITNLIKEGLVEEAEDMFSS 734



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 114/449 (25%), Positives = 216/449 (48%), Gaps = 11/449 (2%)

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLA-KDRLTDMVWKVYKKMVQLGVVA 198
           Y  +K  +D   VFD M +    P++ + T++LN  A K  L DM   ++  M+  G+  
Sbjct: 337 YGKIKEARD---VFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMT-DLFDLMLGDGIAP 392

Query: 199 NIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQ 258
           +I+ +NVLI A      +DK   +  EM    V+ D+ TY T+IA  C+ G   +A+   
Sbjct: 393 DIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKF 452

Query: 259 DRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRA 316
           ++M  +G++PD   Y+ LI GFC  G + +A+ L  +I   G   + V ++++I+  C+ 
Sbjct: 453 NQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKL 512

Query: 317 NDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTC 376
             + +A  + ++    G++P  V Y+ ++   C  G++  A R+ + M    I P++V  
Sbjct: 513 GRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVY 572

Query: 377 NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD 436
            TL+N YCKIG     + +   ML+ G+      Y  +I G  +A     AK     M +
Sbjct: 573 GTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTE 632

Query: 437 AGFSPSYCSYSWLVDG-YCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVD 495
           +G + + C+Y+ ++ G + N+  +EA+  L  E  +  + +++     +I    +  +V+
Sbjct: 633 SGIAMNKCTYNIVLRGLFKNRCFDEAIF-LFKELRAMNVKINIITLNTMIAGMFQTRRVE 691

Query: 496 YAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFS 555
            A+ LF  +  +G++   V Y+ +     + G  +   D+   M         ++     
Sbjct: 692 EAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVV 751

Query: 556 ASYAKDNEIL--DLFWSHVVDRGLMSKHI 582
               K NEI+    + S + +R    +H+
Sbjct: 752 RELLKKNEIVRAGAYLSKIDERNFSLEHL 780



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 90/366 (24%), Positives = 169/366 (46%), Gaps = 2/366 (0%)

Query: 131 HVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKK 190
           +  + L+  YAN  M    + +F++MR H + P +     ++ +L +    D   + + +
Sbjct: 395 YTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQ 454

Query: 191 MVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGM 250
           M+  GV  + + Y+ LI   C    + K ++L+ E+    +  D+  ++++I   CK G 
Sbjct: 455 MIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGR 514

Query: 251 HYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTT 308
             +A  + D     G+ P  V Y+ L+ G+C  G+M +A R+F  +   G  PN V Y T
Sbjct: 515 VMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGT 574

Query: 309 LIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKK 368
           L++GYC+   ++E L L   M  KG+ P  + YN I+  L + GR   A    +EM E  
Sbjct: 575 LVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESG 634

Query: 369 IAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAK 428
           IA +  T N ++    K      A+ +   +    + ++  T   +I G  + + ++ AK
Sbjct: 635 IAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAK 694

Query: 429 ELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRF 488
           +L   +  +G  P   +YS ++     +   E    +     + G   D  +   ++R  
Sbjct: 695 DLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVREL 754

Query: 489 CKKEKV 494
            KK ++
Sbjct: 755 LKKNEI 760



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 84/315 (26%), Positives = 143/315 (45%), Gaps = 40/315 (12%)

Query: 254 ALAVQDRMEREGISPDIVTYNSLIHGFCR------------------------------- 282
           ALA   ++ R G+  +I+  N L+ GFC                                
Sbjct: 130 ALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILL 189

Query: 283 -----EGRMREARRLFRDIK--GA--TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKG 333
                +G+  +A  L R +   GA  +P+ V Y+T+IDG+ +  D+ +A  L + M  +G
Sbjct: 190 KSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRG 249

Query: 334 VYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAM 393
           + P  VTY+S++  LCK   +  A   L +M  K + P+N T N LI  Y   G    A+
Sbjct: 250 IPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAV 309

Query: 394 KVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGY 453
           +V   M    ++ D  T   L+   CK  ++  A+++   M   G +P+  SY+ +++GY
Sbjct: 310 RVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGY 369

Query: 454 CNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDS 513
             K     +  L D  +  G+  D+  +  LI+ +     +D A  +FN M+ +G+  D 
Sbjct: 370 ATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDV 429

Query: 514 VIYTSLAYAYWRAGE 528
           V Y ++  A  R G+
Sbjct: 430 VTYRTVIAALCRIGK 444



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 72/278 (25%), Positives = 118/278 (42%), Gaps = 38/278 (13%)

Query: 300 TPNHVTYTTLID-----------------------------------GYCRANDLEEALR 324
           +P   TY  L+D                                   G+C A   +EAL 
Sbjct: 108 SPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEALD 167

Query: 325 -LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI--APDNVTCNTLIN 381
            L       G  P V +Y+ +L+ LC +G+   A+ LL  M E     +PD V  +T+I+
Sbjct: 168 ILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVID 227

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
            + K GD   A  +   M++ G+  D  TY +++H  CKA+ MD A+  L  M++ G  P
Sbjct: 228 GFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLP 287

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
           +  +Y+ L+ GY +    +  +++  E     +  DV     L+   CK  K+  A+ +F
Sbjct: 288 NNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVF 347

Query: 502 NLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
           + M   G   +   YT +   Y   G     +D+ D M
Sbjct: 348 DTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLM 385



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 68/278 (24%), Positives = 118/278 (42%), Gaps = 2/278 (0%)

Query: 143 LKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHL 202
           L    D   +FD      L P     ++L++        +   +V+  MV  G+  N  +
Sbjct: 512 LGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVV 571

Query: 203 YNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRME 262
           Y  L++  CK   +D+   L  EM  K ++     YN +I    + G    A      M 
Sbjct: 572 YGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMT 631

Query: 263 REGISPDIVTYNSLIHGFCREGRMREARRLFRDIKG--ATPNHVTYTTLIDGYCRANDLE 320
             GI+ +  TYN ++ G  +     EA  LF++++      N +T  T+I G  +   +E
Sbjct: 632 ESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVE 691

Query: 321 EALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLI 380
           EA  L   ++  G+ P VVTY+ ++  L KEG + +A  + + M      PD+   N ++
Sbjct: 692 EAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVV 751

Query: 381 NAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGF 418
               K  +   A    +++ E    L+  T   L+  F
Sbjct: 752 RELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLF 789



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 63/258 (24%), Positives = 118/258 (45%), Gaps = 2/258 (0%)

Query: 132 VLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKM 191
           V S L+  Y  +   +  L+VFD M    + P+      L+N   K    D    ++++M
Sbjct: 536 VYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREM 595

Query: 192 VQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMH 251
           +Q G+  +  LYN++I    ++      +    EM    +  +  TYN ++    K    
Sbjct: 596 LQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCF 655

Query: 252 YEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTL 309
            EA+ +   +    +  +I+T N++I G  +  R+ EA+ LF  I   G  P  VTY+ +
Sbjct: 656 DEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIM 715

Query: 310 IDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI 369
           I    +   +EEA  +   M   G  P     N ++R+L K+  I  A   L++++E+  
Sbjct: 716 ITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNF 775

Query: 370 APDNVTCNTLINAYCKIG 387
           + +++T   L++ +   G
Sbjct: 776 SLEHLTTMLLVDLFSSKG 793



 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 53/245 (21%), Positives = 94/245 (38%), Gaps = 41/245 (16%)

Query: 365 NEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEM 424
             + ++P + T   L++   +      A+    ++L  GL ++      L+ GFC+AK  
Sbjct: 103 GPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRT 162

Query: 425 DIAKELLF--------------------GMLDAG------------------FSPSYCSY 446
           D A ++L                      + D G                   SP   +Y
Sbjct: 163 DEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAY 222

Query: 447 SWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQG 506
           S ++DG+  + +      L  E V RG+  D   Y +++   CK   +D A+     M  
Sbjct: 223 STVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVN 282

Query: 507 NGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM---ITLKIYRSFSASYAKDNE 563
            G+L ++  Y +L Y Y   G+ K    +  +M R  ++   +TL +       Y K  E
Sbjct: 283 KGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKE 342

Query: 564 ILDLF 568
             D+F
Sbjct: 343 ARDVF 347


>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
          Length = 735

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 123/417 (29%), Positives = 201/417 (48%), Gaps = 6/417 (1%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           S +  ++K+  +PD  +   S L+          + L++ D+M      P L     L+N
Sbjct: 128 SAMGKIIKLGYEPD--TVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVN 185

Query: 174 SLA-KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVR 232
            L    +++D V  +  +MV+ G   N   Y  ++   CKS       +LL +ME + ++
Sbjct: 186 GLCLNGKVSDAVLLI-DRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIK 244

Query: 233 ADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRL 292
            D   Y+ +I   CK G    A  + + ME +G   DI+ Y +LI GFC  GR  +  +L
Sbjct: 245 LDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKL 304

Query: 293 FRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
            RD+  +  TP+ V ++ LID + +   L EA  L + M  +G+ P  VTY S++   CK
Sbjct: 305 LRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCK 364

Query: 351 EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
           E ++  AN +L+ M  K   P+  T N LIN YCK       +++  +M   G++ D  T
Sbjct: 365 ENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVT 424

Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFV 470
           Y  LI GFC+  ++++AKEL   M+     P   SY  L+DG C+    E  L++ ++  
Sbjct: 425 YNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIE 484

Query: 471 SRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
              + +D+ +Y  +I   C   KVD A  LF  +   G+  D   Y  +     + G
Sbjct: 485 KSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKG 541



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 130/491 (26%), Positives = 228/491 (46%), Gaps = 19/491 (3%)

Query: 53  CCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLST 112
           CC    LS AF    +     Y+    +  T+I+ L        A  +++++       T
Sbjct: 117 CCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPT 176

Query: 113 PSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLL 172
              LNALV        N   L+  V          D + + D+M      P+      +L
Sbjct: 177 LITLNALV--------NGLCLNGKV---------SDAVLLIDRMVETGFQPNEVTYGPVL 219

Query: 173 NSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVR 232
             + K   T +  ++ +KM +  +  +   Y+++I   CK   +D    L  EME K  +
Sbjct: 220 KVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFK 279

Query: 233 ADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRL 292
           AD+  Y TLI  +C  G   +   +   M +  I+PD+V +++LI  F +EG++REA  L
Sbjct: 280 ADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEEL 339

Query: 293 FRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
            +++  +G +P+ VTYT+LIDG+C+ N L++A  + ++M +KG  P + T+N ++   CK
Sbjct: 340 HKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCK 399

Query: 351 EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
              I D   L  +M+ + +  D VT NTLI  +C++G    A ++   M+   +  D  +
Sbjct: 400 ANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVS 459

Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFV 470
           YK L+ G C   E + A E+   +  +        Y+ ++ G CN +  +    L     
Sbjct: 460 YKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLP 519

Query: 471 SRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPK 530
            +G+  DV  Y  +I   CKK  +  A  LF  M+ +G   +   Y  L  A+   G+  
Sbjct: 520 LKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDAT 579

Query: 531 ACSDILDDMYR 541
             + +++++ R
Sbjct: 580 KSAKLIEEIKR 590



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 126/463 (27%), Positives = 217/463 (46%), Gaps = 40/463 (8%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D + +F +M      P L   + L + +A+ +  D+V  + K+M   G+  N++  +++I
Sbjct: 55  DAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMI 114

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           + CC+   +      + ++       D  T++TLI   C +G   EAL + DRM   G  
Sbjct: 115 NCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHK 174

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTY------------------- 306
           P ++T N+L++G C  G++ +A  L   +   G  PN VTY                   
Sbjct: 175 PTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMEL 234

Query: 307 ----------------TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
                           + +IDG C+   L+ A  L   M  KG    ++ Y +++R  C 
Sbjct: 235 LRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCY 294

Query: 351 EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
            GR  D  +LL +M ++KI PD V  + LI+ + K G    A ++   M++ G+  D  T
Sbjct: 295 AGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVT 354

Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFV 470
           Y +LI GFCK  ++D A  +L  M+  G  P+  +++ L++GYC  N  +  L+L  +  
Sbjct: 355 YTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMS 414

Query: 471 SRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPK 530
            RG+  D   Y  LI+ FC+  K++ A+ LF  M    +  D V Y  L       GEP+
Sbjct: 415 LRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPE 474

Query: 531 ACSDILDDMYRRRLMITLKIYRSF---SASYAKDNEILDLFWS 570
              +I + + + ++ + + IY        + +K ++  DLF S
Sbjct: 475 KALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCS 517



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 117/470 (24%), Positives = 200/470 (42%), Gaps = 78/470 (16%)

Query: 84  MIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANL 143
           +I  L K+    +A N+  ++ ++ F +   +   L++      G  +   W        
Sbjct: 253 IIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIR------GFCYAGRW-------- 298

Query: 144 KMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLY 203
               DG ++   M    + P + A + L++   K+       +++K+M+Q G+  +   Y
Sbjct: 299 ---DDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTY 355

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER 263
             LI   CK + +DK   +L  M  K    ++ T+N LI  YCK  +  + L +  +M  
Sbjct: 356 TSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSL 415

Query: 264 EGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEE 321
            G+  D VTYN+LI GFC  G++  A+ LF+++  +   P+ V+Y  L+DG C   + E+
Sbjct: 416 RGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEK 475

Query: 322 ALRLRE-----------------------------------VMAAKGVYPGVVTYNSILR 346
           AL + E                                    +  KGV P V TYN ++ 
Sbjct: 476 ALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIG 535

Query: 347 KLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKN--------- 397
            LCK+G + +A+ L  +M E   +P+  T N LI A+   GD   + K+           
Sbjct: 536 GLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSV 595

Query: 398 -------------RMLEAGLMLDQFTYKALIHGFCKAKEMDI--AKELLFGMLDAGFSPS 442
                        RML+AG   D FT+  L+  FC  +   +  A  L   M   G+ P+
Sbjct: 596 DASTLRFALSTLARMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPN 655

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKE 492
             +Y+ ++ G  N N    +  +LD+   RG   +       I   CK++
Sbjct: 656 VVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNAVTKSTFISGLCKQD 705



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 110/376 (29%), Positives = 179/376 (47%), Gaps = 14/376 (3%)

Query: 217 DKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSL 276
           D    L  EM     R  L  ++ L ++  +   +   L +  +ME +GI+ ++ T + +
Sbjct: 54  DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113

Query: 277 IHGFCREGRMREA-RRLFRDIK-GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGV 334
           I+  CR  ++  A   + + IK G  P+ VT++TLI+G C    + EAL L + M   G 
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173

Query: 335 YPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMK 394
            P ++T N+++  LC  G++ DA  L++ M E    P+ VT   ++   CK G TA AM+
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233

Query: 395 VKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYC 454
           +  +M E  + LD   Y  +I G CK   +D A  L   M   GF      Y+ L+ G+C
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC 293

Query: 455 NKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSV 514
                +   KLL + + R +  DV  + ALI  F K+ K+  A+ L   M   GI  D+V
Sbjct: 294 YAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTV 353

Query: 515 IYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVD 574
            YTSL   + +  +    + +LD M  +     ++ +      Y K N         ++D
Sbjct: 354 TYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKAN---------LID 404

Query: 575 RGLMSKHIFKEMQLRN 590
            GL    +F++M LR 
Sbjct: 405 DGL---ELFRKMSLRG 417



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 79/275 (28%), Positives = 134/275 (48%), Gaps = 26/275 (9%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           ++F +M    + P + +  +LL+ L  +   +   ++++K+ +  +  +I +YN++IH  
Sbjct: 443 ELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGM 502

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           C +S VD    L C +  K V+ D+ TYN +I   CKKG   EA  +  +ME +G SP+ 
Sbjct: 503 CNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNG 562

Query: 271 VTYNSLIHGFCREGRMREARRLFRDIK------------------------GATPNHVTY 306
            TYN LI     EG   ++ +L  +IK                        G  P+  T+
Sbjct: 563 CTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLARMLKAGHEPDVFTF 622

Query: 307 TTLIDGYCRANDLE--EALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM 364
           TTL+  +C   +    +A  L + M A G  P VVTYN++++ L     I     +L++M
Sbjct: 623 TTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQM 682

Query: 365 NEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRM 399
            E+   P+ VT +T I+  CK     SA+ +  +M
Sbjct: 683 FERGCQPNAVTKSTFISGLCKQDLHGSAILLLRKM 717



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/254 (20%), Positives = 103/254 (40%), Gaps = 12/254 (4%)

Query: 337 GVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVK 396
           G V+Y   LR    + +  DA  L  EM   +  P  +  + L +   +       + + 
Sbjct: 36  GKVSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLC 95

Query: 397 NRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNK 456
            +M   G+  + +T   +I+  C+ +++ +A   +  ++  G+ P   ++S L++G C +
Sbjct: 96  KQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLE 155

Query: 457 NNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIY 516
                 L+L+D  V  G    +    AL+   C   KV  A  L + M   G   + V Y
Sbjct: 156 GRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTY 215

Query: 517 TSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRG 576
             +     ++G+     ++L  M  R++ +    Y        KD  + + F        
Sbjct: 216 GPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAF-------- 267

Query: 577 LMSKHIFKEMQLRN 590
               ++F EM+++ 
Sbjct: 268 ----NLFNEMEIKG 277



 Score = 40.0 bits (92), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 26/110 (23%), Positives = 50/110 (45%), Gaps = 2/110 (1%)

Query: 190 KMVQLGVVANIHLYNVLIHACC--KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCK 247
           +M++ G   ++  +  L+   C  +++ V     L   M+    + ++ TYNT+I     
Sbjct: 609 RMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLN 668

Query: 248 KGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK 297
             M  +   V D+M   G  P+ VT ++ I G C++     A  L R ++
Sbjct: 669 GNMISQVPGVLDQMFERGCQPNAVTKSTFISGLCKQDLHGSAILLLRKME 718


>gi|356522596|ref|XP_003529932.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Glycine max]
          Length = 827

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 134/505 (26%), Positives = 234/505 (46%), Gaps = 73/505 (14%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           + L++ D+M    +  ++   T L+         +   +++ ++V++GV  N+ +++VLI
Sbjct: 310 EALRLKDEMVDSRVPVNVAVATSLIKGYCVRGDVNSALRLFDEVVEVGVTPNVAIFSVLI 369

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLF------------------------------- 236
             C K  +V+K  +L   M+   ++  +F                               
Sbjct: 370 EWCSKIGNVEKANELYTRMKCMGLQPTVFILNFLLKGFRKQNLLENAYLLLDGAVENGIA 429

Query: 237 ---TYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
              TYN ++   C+ G   EA  + D+M  +GI+P +V+YN +I G C++G M +A  + 
Sbjct: 430 SVVTYNIVLLWLCELGKVNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVM 489

Query: 294 RDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
             I   G  PN +TYT L++G  +  D E A  + + M A G+ P   T+NSI+  LCK 
Sbjct: 490 NGIIESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKV 549

Query: 352 GRIRDANRLLN-----------------------------------EMNEKKIAPDNVTC 376
           GR+ +A   LN                                   EM   +I+P+ +T 
Sbjct: 550 GRVSEARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISPNVITY 609

Query: 377 NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD 436
            +LIN +CK      A+K+ + M   GL LD   Y  LI GFCK ++M+ A +    +L+
Sbjct: 610 TSLINGFCKSNKMDLALKMHDDMKRKGLELDITVYATLIAGFCKMQDMENACKFFSKLLE 669

Query: 437 AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDY 496
            G +P+   Y+ ++  Y N NN EA L L  E ++  +  D+ +Y +LI    K+ K+ +
Sbjct: 670 VGLTPNTIVYNIMISAYRNLNNMEAALNLHKEMINNKIPCDLKIYTSLIDGLLKEGKLSF 729

Query: 497 AQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSA 556
           A  L++ M   GI+ D  +Y  L       G+ +    IL +M    +  T+ +Y +  A
Sbjct: 730 ALDLYSEMLCRGIVPDIFMYNVLINGLCNHGQLENAGKILKEMDGNNITPTVLLYNTLIA 789

Query: 557 SYAKDNEILDLFWSH--VVDRGLMS 579
            + K+  + + F  H  ++D+GL+ 
Sbjct: 790 GHFKEGNLQEAFRLHDEMLDKGLVP 814



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 133/604 (22%), Positives = 250/604 (41%), Gaps = 79/604 (13%)

Query: 57  PSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKS-AQNMLEKIALRDFLSTPSV 115
           P  +  FFK  E+    +  +      ++ IL  N      A+++L K    D      V
Sbjct: 75  PRSALRFFKQVETK-GGFAKTADVLCLLLQILASNPETHGDAKHLLNKYVFGDSAPAAKV 133

Query: 116 LNALVKIHDDPDG----NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVL 171
           L  L+    +  G    +S V ++L+I Y       + ++ F  M    ++P +    VL
Sbjct: 134 LVELLVECAERYGFKLSDSRVFNYLLISYVRANKITEAVECFRAMLEDGVVPWVPFVNVL 193

Query: 172 LNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDV 231
           L ++ +  + +   +++ +M +  +  + +   VL+ AC K     + E+   +   + +
Sbjct: 194 LTAMIRRNMVEDAHRLFDEMAERRIYGDCYTLQVLMRACLKGGKFVEAERYFGQAAGRGL 253

Query: 232 RADLFTYNTLIALYCKK-----------------------------------GMHYEALA 256
           + D  +Y+ +I   C+                                    G   EAL 
Sbjct: 254 KLDAASYSIVIQAVCRGSDLDLASKLVEGDEELGWVPSEGTYAAVIGACVRLGNFGEALR 313

Query: 257 VQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYC 314
           ++D M    +  ++    SLI G+C  G +  A RLF ++   G TPN   ++ LI+   
Sbjct: 314 LKDEMVDSRVPVNVAVATSLIKGYCVRGDVNSALRLFDEVVEVGVTPNVAIFSVLIEWCS 373

Query: 315 RANDLEEALRLREVMAAKGVYP----------------------------------GVVT 340
           +  ++E+A  L   M   G+ P                                   VVT
Sbjct: 374 KIGNVEKANELYTRMKCMGLQPTVFILNFLLKGFRKQNLLENAYLLLDGAVENGIASVVT 433

Query: 341 YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML 400
           YN +L  LC+ G++ +A  L ++M  K I P  V+ N +I  +CK G    A +V N ++
Sbjct: 434 YNIVLLWLCELGKVNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGII 493

Query: 401 EAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEE 460
           E+GL  +  TY  L+ G  K  + + A  +   M+ AG  P+  +++ +++G C      
Sbjct: 494 ESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVS 553

Query: 461 ALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLA 520
                L+ F+ +        Y  +I  + K+  +D A+ ++  M  + I  + + YTSL 
Sbjct: 554 EARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLI 613

Query: 521 YAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAK--DNEILDLFWSHVVDRGLM 578
             + ++ +      + DDM R+ L + + +Y +  A + K  D E    F+S +++ GL 
Sbjct: 614 NGFCKSNKMDLALKMHDDMKRKGLELDITVYATLIAGFCKMQDMENACKFFSKLLEVGLT 673

Query: 579 SKHI 582
              I
Sbjct: 674 PNTI 677



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 98/390 (25%), Positives = 183/390 (46%), Gaps = 6/390 (1%)

Query: 132 VLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKM 191
           VL WL      L    +   ++D+M    + P L +   ++    K    D   +V   +
Sbjct: 437 VLLWL----CELGKVNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGI 492

Query: 192 VQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMH 251
           ++ G+  N   Y +L+    K  D +    +  +M    +    +T+N++I   CK G  
Sbjct: 493 IESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRV 552

Query: 252 YEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTL 309
            EA    +   ++   P  +TYN +I G+ +EG +  A  ++R++     +PN +TYT+L
Sbjct: 553 SEARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSL 612

Query: 310 IDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI 369
           I+G+C++N ++ AL++ + M  KG+   +  Y +++   CK   + +A +  +++ E  +
Sbjct: 613 INGFCKSNKMDLALKMHDDMKRKGLELDITVYATLIAGFCKMQDMENACKFFSKLLEVGL 672

Query: 370 APDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKE 429
            P+ +  N +I+AY  + +  +A+ +   M+   +  D   Y +LI G  K  ++  A +
Sbjct: 673 TPNTIVYNIMISAYRNLNNMEAALNLHKEMINNKIPCDLKIYTSLIDGLLKEGKLSFALD 732

Query: 430 LLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFC 489
           L   ML  G  P    Y+ L++G CN    E   K+L E     +   V +Y  LI    
Sbjct: 733 LYSEMLCRGIVPDIFMYNVLINGLCNHGQLENAGKILKEMDGNNITPTVLLYNTLIAGHF 792

Query: 490 KKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
           K+  +  A RL + M   G++ D   Y  L
Sbjct: 793 KEGNLQEAFRLHDEMLDKGLVPDDTTYDIL 822



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 111/485 (22%), Positives = 218/485 (44%), Gaps = 75/485 (15%)

Query: 169 TVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEF 228
           ++++ ++ +    D+  K+ +   +LG V +   Y  +I AC +  +  +  +L  EM  
Sbjct: 261 SIVIQAVCRGSDLDLASKLVEGDEELGWVPSEGTYAAVIGACVRLGNFGEALRLKDEMVD 320

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
             V  ++    +LI  YC +G    AL + D +   G++P++  ++ LI    + G + +
Sbjct: 321 SRVPVNVAVATSLIKGYCVRGDVNSALRLFDEVVEVGVTPNVAIFSVLIEWCSKIGNVEK 380

Query: 289 ARRLFRDIK--------------------------------GATPNH----VTYTTLIDG 312
           A  L+  +K                                GA  N     VTY  ++  
Sbjct: 381 ANELYTRMKCMGLQPTVFILNFLLKGFRKQNLLENAYLLLDGAVENGIASVVTYNIVLLW 440

Query: 313 YCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPD 372
            C    + EA  L + M  KG+ P +V+YN ++   CK+G + DA+ ++N + E  + P+
Sbjct: 441 LCELGKVNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPN 500

Query: 373 NVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLF 432
            +T   L+    K GD   A  + ++M+ AG++   +T+ ++I+G CK   +  A++ L 
Sbjct: 501 AITYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLN 560

Query: 433 GMLDAGF-----------------------------------SPSYCSYSWLVDGYCNKN 457
             +   F                                   SP+  +Y+ L++G+C  N
Sbjct: 561 TFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKSN 620

Query: 458 NEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYT 517
             +  LK+ D+   +GL +D++VY  LI  FCK + ++ A + F+ +   G+  ++++Y 
Sbjct: 621 KMDLALKMHDDMKRKGLELDITVYATLIAGFCKMQDMENACKFFSKLLEVGLTPNTIVYN 680

Query: 518 SLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI---LDLFWSHVVD 574
            +  AY      +A  ++  +M   ++   LKIY S      K+ ++   LDL +S ++ 
Sbjct: 681 IMISAYRNLNNMEAALNLHKEMINNKIPCDLKIYTSLIDGLLKEGKLSFALDL-YSEMLC 739

Query: 575 RGLMS 579
           RG++ 
Sbjct: 740 RGIVP 744



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 95/340 (27%), Positives = 162/340 (47%), Gaps = 2/340 (0%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D  +V + +    L P+    T+L+    K    +  + ++ +MV  G+V   + +N +I
Sbjct: 484 DAHEVMNGIIESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSII 543

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           +  CK   V +    L     +       TYN +I  Y K+G    A +V   M R  IS
Sbjct: 544 NGLCKVGRVSEARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEIS 603

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRL 325
           P+++TY SLI+GFC+  +M  A ++  D+K  G   +   Y TLI G+C+  D+E A + 
Sbjct: 604 PNVITYTSLINGFCKSNKMDLALKMHDDMKRKGLELDITVYATLIAGFCKMQDMENACKF 663

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
              +   G+ P  + YN ++        +  A  L  EM   KI  D     +LI+   K
Sbjct: 664 FSKLLEVGLTPNTIVYNIMISAYRNLNNMEAALNLHKEMINNKIPCDLKIYTSLIDGLLK 723

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            G  + A+ + + ML  G++ D F Y  LI+G C   +++ A ++L  M     +P+   
Sbjct: 724 EGKLSFALDLYSEMLCRGIVPDIFMYNVLINGLCNHGQLENAGKILKEMDGNNITPTVLL 783

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
           Y+ L+ G+  + N +   +L DE + +GL  D + Y  L+
Sbjct: 784 YNTLIAGHFKEGNLQEAFRLHDEMLDKGLVPDDTTYDILV 823



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 94/342 (27%), Positives = 151/342 (44%), Gaps = 8/342 (2%)

Query: 115 VLNALVKIHDDPDGNSHVLSWLVIFYANLKMT--QDGLQVFDQMRVHNLMPHLHACTVLL 172
           V+N +++    P+     +++ ++   + K    +    +FDQM    ++P  +    ++
Sbjct: 488 VMNGIIESGLKPNA----ITYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSII 543

Query: 173 NSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVR 232
           N L K              ++   +     YN +I    K   +D  E +  EM   ++ 
Sbjct: 544 NGLCKVGRVSEARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEIS 603

Query: 233 ADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRL 292
            ++ TY +LI  +CK      AL + D M+R+G+  DI  Y +LI GFC+   M  A + 
Sbjct: 604 PNVITYTSLINGFCKSNKMDLALKMHDDMKRKGLELDITVYATLIAGFCKMQDMENACKF 663

Query: 293 FRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
           F  +   G TPN + Y  +I  Y   N++E AL L + M    +   +  Y S++  L K
Sbjct: 664 FSKLLEVGLTPNTIVYNIMISAYRNLNNMEAALNLHKEMINNKIPCDLKIYTSLIDGLLK 723

Query: 351 EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
           EG++  A  L +EM  + I PD    N LIN  C  G   +A K+   M    +      
Sbjct: 724 EGKLSFALDLYSEMLCRGIVPDIFMYNVLINGLCNHGQLENAGKILKEMDGNNITPTVLL 783

Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
           Y  LI G  K   +  A  L   MLD G  P   +Y  LV+G
Sbjct: 784 YNTLIAGHFKEGNLQEAFRLHDEMLDKGLVPDDTTYDILVNG 825


>gi|297836398|ref|XP_002886081.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331921|gb|EFH62340.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 743

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 158/575 (27%), Positives = 264/575 (45%), Gaps = 53/575 (9%)

Query: 1   MASLVALNSDTKFIKTISAIML--KGHWAKLLNPNIASSLTSTAIHKVLLNLYNCCHIPS 58
           MA+L  L S  + +KT+++I+   K H  + LNP I     +  +   LL+  +    P 
Sbjct: 1   MATLKPLES--QLLKTLTSILTSEKTHLLETLNPYIPQ--ITQPLLSSLLSSPSLAKKPE 56

Query: 59  LSCAFFKWAESAVPNY--KHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVL 116
              +FF+WA+S++P      S     +++  L  +  F  A+++L    +R   ++ S+ 
Sbjct: 57  TLVSFFQWAQSSIPEAFPSDSPLPLLSVVRSLLSHHKFADAKSLLVSY-IRTSDASLSLC 115

Query: 117 NALV--KIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNS 174
           N+L+   +H  P  +  +    +  Y +       LQVF +M    L P+L  C  LL  
Sbjct: 116 NSLLHPNLHLSPPPSKALFDIALSAYLHAGKPHVALQVFQKMIRLKLKPNLLTCNTLLIG 175

Query: 175 LAKDRLTDMVW---KVYKKMVQLGVVANIHLYNVLIHACC-------------------- 211
           L +   +  +    +V+  MV++GV  ++  +NVL++  C                    
Sbjct: 176 LVRYPSSFSIASAREVFDDMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGMLERMVSEFN 235

Query: 212 ----------------KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
                           K   +  V+ LL +M+   +  +  TYN L+  YCK G   EA 
Sbjct: 236 VNPDNVTYNTILKAMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAF 295

Query: 256 AVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKG--ATPNHVTYTTLIDGY 313
            + + M++  I PD+ TYN LI+G C  G +RE   L   +K     P+ VTY TLIDG 
Sbjct: 296 QIVELMKQTNILPDLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGC 355

Query: 314 CRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE-KKIAPD 372
                  EA +L E M   GV P  VT+N  L+ LCKE +  +  R + E+ E    +PD
Sbjct: 356 FELGLSLEAKKLMEQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPD 415

Query: 373 NVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLF 432
            VT +TLI AY K+GD + A+++   M + G+ ++  T   ++   CK +++D A  LL 
Sbjct: 416 IVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLLD 475

Query: 433 GMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKE 492
                G+     +Y  L+ GY  +   E   ++ DE     +   V+ + +LI   C   
Sbjct: 476 SAHKRGYIVDEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHG 535

Query: 493 KVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
           K + A   F+ +  +G+L D   + S+   Y + G
Sbjct: 536 KTELAMEKFDELAESGLLPDDCTFNSIILGYCKEG 570



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 102/383 (26%), Positives = 190/383 (49%), Gaps = 4/383 (1%)

Query: 185 WKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIAL 244
           +++ + M Q  ++ ++  YN+LI+  C +  + +  +L+  M+   ++ D+ TYNTLI  
Sbjct: 295 FQIVELMKQTNILPDLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDG 354

Query: 245 YCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI---KGATP 301
             + G+  EA  + ++ME +G+ P+ VT+N  +   C+E +  E  R  +++    G +P
Sbjct: 355 CFELGLSLEAKKLMEQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSP 414

Query: 302 NHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLL 361
           + VTY TLI  Y +  DL  AL +   M  KG+    +T N+IL  LCKE ++ +A+ LL
Sbjct: 415 DIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLL 474

Query: 362 NEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKA 421
           +  +++    D VT  TLI  Y +      A ++ + M    +     T+ +LI G C  
Sbjct: 475 DSAHKRGYIVDEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHH 534

Query: 422 KEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVY 481
            + ++A E    + ++G  P  C+++ ++ GYC +   E   +  +E +      D    
Sbjct: 535 GKTELAMEKFDELAESGLLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTC 594

Query: 482 RALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
             L+   CK+   + A   FN +     + D+V Y ++  A+ +  + K   D+L +M  
Sbjct: 595 NILLNGLCKEGMTEKALNFFNTLITEREV-DTVTYNTMISAFCKDKKLKEAYDLLSEMEE 653

Query: 542 RRLMITLKIYRSFSASYAKDNEI 564
           +RL      Y S   S  +D ++
Sbjct: 654 KRLEPDRFTYNSIITSLMEDGKL 676



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 93/311 (29%), Positives = 156/311 (50%), Gaps = 4/311 (1%)

Query: 143 LKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQL-GVVANIH 201
           L ++ +  ++ +QM    + P+     + L  L K+   + V +  K++V++ G   +I 
Sbjct: 358 LGLSLEAKKLMEQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIV 417

Query: 202 LYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRM 261
            Y+ LI A  K  D+    +++ EM  K ++ +  T NT++   CK+    EA  + D  
Sbjct: 418 TYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSA 477

Query: 262 EREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDL 319
            + G   D VTY +LI G+ RE ++ +A  ++ ++K    TP   T+ +LI G C     
Sbjct: 478 HKRGYIVDEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKT 537

Query: 320 EEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTL 379
           E A+   + +A  G+ P   T+NSI+   CKEGR+  A    NE  +    PDN TCN L
Sbjct: 538 ELAMEKFDELAESGLLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNIL 597

Query: 380 INAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGF 439
           +N  CK G T  A+   N ++     +D  TY  +I  FCK K++  A +LL  M +   
Sbjct: 598 LNGLCKEGMTEKALNFFNTLI-TEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKRL 656

Query: 440 SPSYCSYSWLV 450
            P   +Y+ ++
Sbjct: 657 EPDRFTYNSII 667



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 89/312 (28%), Positives = 158/312 (50%), Gaps = 7/312 (2%)

Query: 238 YNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR---EGRMREARRLFR 294
           ++  ++ Y   G  + AL V  +M R  + P+++T N+L+ G  R      +  AR +F 
Sbjct: 134 FDIALSAYLHAGKPHVALQVFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSIASAREVFD 193

Query: 295 DIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAK-GVYPGVVTYNSILRKLCKE 351
           D+   G + +  T+  L++GYC    LE+AL + E M ++  V P  VTYN+IL+ + K+
Sbjct: 194 DMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGMLERMVSEFNVNPDNVTYNTILKAMSKK 253

Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
           GR+ D   LL +M    + P+ VT N L+  YCK+G    A ++   M +  ++ D  TY
Sbjct: 254 GRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNILPDLCTY 313

Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
             LI+G C A  +    EL+  M      P   +Y+ L+DG           KL+++  +
Sbjct: 314 NILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFELGLSLEAKKLMEQMEN 373

Query: 472 RGLCVDVSVYRALIRRFCKKEKVDYAQR-LFNLMQGNGILGDSVIYTSLAYAYWRAGEPK 530
            G+  +   +   ++  CK+EK +   R +  L++ +G   D V Y +L  AY + G+  
Sbjct: 374 DGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIKAYLKVGDLS 433

Query: 531 ACSDILDDMYRR 542
              +++ +M ++
Sbjct: 434 GALEMMREMGQK 445



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 83/284 (29%), Positives = 133/284 (46%), Gaps = 5/284 (1%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           +V + + +H   P +     L+ +  K        ++ ++M Q G+  N    N ++ A 
Sbjct: 402 KVKELVEMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDAL 461

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           CK   VD+   LL     +    D  TY TLI  Y ++    +A  + D M+R  I+P +
Sbjct: 462 CKERKVDEAHNLLDSAHKRGYIVDEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTV 521

Query: 271 VTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
            T+NSLI G C  G+   A   F ++   G  P+  T+ ++I GYC+   +E+A      
Sbjct: 522 TTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDCTFNSIILGYCKEGRVEKAFEFYNE 581

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM-NEKKIAPDNVTCNTLINAYCKIG 387
                  P   T N +L  LCKEG    A    N +  E+++  D VT NT+I+A+CK  
Sbjct: 582 SIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLITEREV--DTVTYNTMISAFCKDK 639

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
               A  + + M E  L  D+FTY ++I    +  ++  A ELL
Sbjct: 640 KLKEAYDLLSEMEEKRLEPDRFTYNSIITSLMEDGKLSEADELL 683



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 74/279 (26%), Positives = 140/279 (50%), Gaps = 10/279 (3%)

Query: 119 LVKIHD-DPDGNSHVLSWLVIFYANLKMT--QDGLQVFDQMRVHNLMPHLHACTVLLNSL 175
           LV++H   PD    ++++  +  A LK+      L++  +M    +  +      +L++L
Sbjct: 406 LVEMHGFSPD----IVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDAL 461

Query: 176 AKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADL 235
            K+R  D    +     + G + +   Y  LI    +   V+K  ++  EM+   +   +
Sbjct: 462 CKERKVDEAHNLLDSAHKRGYIVDEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTV 521

Query: 236 FTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD 295
            T+N+LI   C  G    A+   D +   G+ PD  T+NS+I G+C+EGR+ +A   + +
Sbjct: 522 TTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDCTFNSIILGYCKEGRVEKAFEFYNE 581

Query: 296 -IKGA-TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGR 353
            IK +  P++ T   L++G C+    E+AL     +  +      VTYN+++   CK+ +
Sbjct: 582 SIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLITEREV-DTVTYNTMISAFCKDKK 640

Query: 354 IRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
           +++A  LL+EM EK++ PD  T N++I +  + G  + A
Sbjct: 641 LKEAYDLLSEMEEKRLEPDRFTYNSIITSLMEDGKLSEA 679



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 44/211 (20%), Positives = 89/211 (42%), Gaps = 11/211 (5%)

Query: 146 TQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNV 205
           T+  ++ FD++    L+P       ++    K+   +  ++ Y + ++     + +  N+
Sbjct: 537 TELAMEKFDELAESGLLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNI 596

Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
           L++  CK    +K       +   +   D  TYNT+I+ +CK     EA  +   ME + 
Sbjct: 597 LLNGLCKEGMTEKALNFFNTL-ITEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKR 655

Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRL 325
           + PD  TYNS+I     +G++ EA  L +   G                R   LE     
Sbjct: 656 LEPDRFTYNSIITSLMEDGKLSEADELLKKFSGK----------FGSMKRNLHLETEKNP 705

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRD 356
               + + +    + Y+ ++ +LC  GR+++
Sbjct: 706 ATSESKEELKTEAIAYSDVINELCSRGRLKE 736



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 52/223 (23%), Positives = 100/223 (44%), Gaps = 4/223 (1%)

Query: 336 PGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT---ASA 392
           P    ++  L      G+   A ++  +M   K+ P+ +TCNTL+    +   +   ASA
Sbjct: 129 PSKALFDIALSAYLHAGKPHVALQVFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSIASA 188

Query: 393 MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGML-DAGFSPSYCSYSWLVD 451
            +V + M++ G+ LD  T+  L++G+C   +++ A  +L  M+ +   +P   +Y+ ++ 
Sbjct: 189 REVFDDMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGMLERMVSEFNVNPDNVTYNTILK 248

Query: 452 GYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILG 511
               K     +  LL +    GL  +   Y  L+  +CK   +  A ++  LM+   IL 
Sbjct: 249 AMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNILP 308

Query: 512 DSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSF 554
           D   Y  L      AG  +   +++D M   +L   +  Y + 
Sbjct: 309 DLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTL 351


>gi|356529489|ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 550

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 134/475 (28%), Positives = 216/475 (45%), Gaps = 54/475 (11%)

Query: 88  LTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQ 147
           + K KH+ +A ++ +++ LR    TPS++                LS L+  Y +L    
Sbjct: 88  IVKMKHYPTAISLSKQMGLRGI--TPSIVT---------------LSILINCYCHLGHMG 130

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
               V   +       +    T ++  L  +       + +  +V  G + +   Y  LI
Sbjct: 131 FAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQGFLLDEVTYGTLI 190

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           +  CK     +  +LL +ME + VR ++  YN ++   CK G+  EA  +   +   GI 
Sbjct: 191 NGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRGID 250

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI------------------------------- 296
           PD+ TY  LIHGFC  G+ RE  RL  D+                               
Sbjct: 251 PDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKAHDM 310

Query: 297 ------KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
                 +G  P+ VT+ TL+ GYC  ND+ EA +L +  A  G+ P V +YN ++   CK
Sbjct: 311 RNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSYNILIIGYCK 370

Query: 351 EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
             RI +A  L N+MN KK+AP+ VT ++LI+  CK G  + A ++ + + + G   +  T
Sbjct: 371 NNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVIT 430

Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFV 470
           Y  ++   CK + +D A EL   M + G +P+  SY+ L++GYC     +  + L +E  
Sbjct: 431 YNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMH 490

Query: 471 SRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWR 525
            R L  D   Y  LI   CK  ++ +A  LFN+M   G   D + Y  L  A+ +
Sbjct: 491 RRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGGPPVDVITYNILFDAFSK 545



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 126/452 (27%), Positives = 208/452 (46%), Gaps = 8/452 (1%)

Query: 98  QNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQ--DGLQVFDQ 155
           QN  +K          ++   L+ +H  P     V+ + +I  + +KM      + +  Q
Sbjct: 48  QNAKKKSGFDAIDDAVALFTRLITMHPLPS----VVEFNMILGSIVKMKHYPTAISLSKQ 103

Query: 156 MRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSD 215
           M +  + P +   ++L+N           + V   +++ G   N      ++   C + +
Sbjct: 104 MGLRGITPSIVTLSILINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGE 163

Query: 216 VDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNS 275
           V K  +    +  +    D  TY TLI   CK G+  EA  +  +ME + + P++V YN 
Sbjct: 164 VRKALEFHDSVVAQGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNM 223

Query: 276 LIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKG 333
           ++ G C++G + EAR L+ D+  +G  P+  TYT LI G+C      E  RL   M  + 
Sbjct: 224 IVDGLCKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRN 283

Query: 334 VYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAM 393
           V   V TYN ++  LCK+G +  A+ + N M E+   PD VT NTL++ YC   D   A 
Sbjct: 284 VNLNVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEAR 343

Query: 394 KVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGY 453
           K+ +   E G+  D ++Y  LI G+CK   +D A  L   M     +P+  +YS L+DG 
Sbjct: 344 KLFDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGL 403

Query: 454 CNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDS 513
           C         +L       G   +V  Y  ++   CK + VD A  LFNLM   G+  + 
Sbjct: 404 CKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNV 463

Query: 514 VIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
             Y  L   Y ++       ++ ++M+RR L+
Sbjct: 464 SSYNILINGYCKSKRIDEAMNLFEEMHRRNLV 495



 Score = 42.0 bits (97), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 36/169 (21%), Positives = 67/169 (39%), Gaps = 2/169 (1%)

Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFV 470
           +  ++    K K    A  L   M   G +PS  + S L++ YC+  +      +L   +
Sbjct: 81  FNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSILINCYCHLGHMGFAFSVLGMVL 140

Query: 471 SRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPK 530
            RG  ++      +++  C   +V  A    + +   G L D V Y +L     + G  +
Sbjct: 141 KRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQGFLLDEVTYGTLINGLCKIGLTR 200

Query: 531 ACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDL--FWSHVVDRGL 577
              ++L  M  + +   + IY        KD  + +    +S VV RG+
Sbjct: 201 EAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRGI 249


>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
          Length = 653

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 128/441 (29%), Positives = 205/441 (46%), Gaps = 37/441 (8%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           + L  F++M      P       LL S+AK +    +  + ++M   G+  +++   ++I
Sbjct: 53  EALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVI 112

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           ++ C  + VD     L ++     + D  T+ TLI   C +G   EAL + D+M  EG  
Sbjct: 113 NSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQ 172

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDIKGAT--PNHVTYTTLIDGYCRANDLEEALRL 325
           P++VTY +LI+G C+ G    A RL R ++     PN V ++TLID  C+   + EA  +
Sbjct: 173 PNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNI 232

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
              M  KG+ P +VTYNS++  LCK    +    L+NEM + KI PD  T NT+++A CK
Sbjct: 233 FSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCK 292

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKAL------------------------------- 414
            G  A A  V + M+  G+  +  TY AL                               
Sbjct: 293 EGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVIS 352

Query: 415 ----IHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFV 470
               I+G+CK + +D A  L   M     +P+  +Y+ L+ G C+    +  + L  E V
Sbjct: 353 YNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMV 412

Query: 471 SRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPK 530
           +RG   D+  YR L    CK   +D A  L   ++G+    D  IYT++     RAGE +
Sbjct: 413 ARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELE 472

Query: 531 ACSDILDDMYRRRLMITLKIY 551
              D+  ++  + L   +  Y
Sbjct: 473 DARDLFSNLSSKGLQPNVWTY 493



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 117/431 (27%), Positives = 204/431 (47%), Gaps = 4/431 (0%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           S L  ++K+   PD  +   + L+          + L +FD+M      P++     L+N
Sbjct: 126 SALAKILKLGHQPDATT--FTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLIN 183

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
            L K   T    ++ + M Q     N+ +++ LI + CK   V +   +  EM  K +  
Sbjct: 184 GLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISP 243

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           ++ TYN+LI   CK         + + M    I PD+ T N+++   C+EG + EA  + 
Sbjct: 244 NIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVV 303

Query: 294 RDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
             +  +G  PN VTY  L+DG+C  N+++ A+++ + M  K     V++YN+++   CK 
Sbjct: 304 DMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKI 363

Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
             +  A  L  EM+ +++ P+ VT NTLI+  C +G    A+ + + M+  G + D  TY
Sbjct: 364 QSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTY 423

Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
           + L    CK + +D A  LL  +  + + P    Y+ ++DG C     E    L     S
Sbjct: 424 RTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSS 483

Query: 472 RGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKA 531
           +GL  +V  Y  +I   CK+  +  A +LF+ M  NG   +   Y  +   + R  E   
Sbjct: 484 KGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALR 543

Query: 532 CSDILDDMYRR 542
             ++L++M  R
Sbjct: 544 TIELLEEMLAR 554



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 145/553 (26%), Positives = 249/553 (45%), Gaps = 36/553 (6%)

Query: 9   SDTKFIKTISAIMLKGHWAKLLNPNIASSLTSTAI----HKVLLNLYNCCHIPSLSCAFF 64
           S   F + +++I    H + LL+  ++  + S  I    + + + + + CH+  +  AF 
Sbjct: 69  STVDFNRLLTSIAKTKHHSTLLS--LSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFS 126

Query: 65  KWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDF----LSTPSVLNALV 120
             A+     ++    +  T+I  L        A ++ +K+    F    ++  +++N L 
Sbjct: 127 ALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLC 186

Query: 121 KIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRL 180
           K+     GN                T   +++   M   N  P++   + L++SL KDR 
Sbjct: 187 KV-----GN----------------TSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQ 225

Query: 181 TDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNT 240
               + ++ +M+  G+  NI  YN LIH  CK  +   V  L+ EM    +  D+FT NT
Sbjct: 226 VTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNT 285

Query: 241 LIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KG 298
           ++   CK+GM  EA  V D M   G+ P++VTYN+L+ G C    +  A ++F  +  K 
Sbjct: 286 VVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKD 345

Query: 299 ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDAN 358
              N ++Y TLI+GYC+   +++A+ L E M+ + + P  VTYN+++  LC  GR++DA 
Sbjct: 346 CVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAI 405

Query: 359 RLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGF 418
            L +EM  +   PD VT  TL +  CK      AM +   +  +    D   Y  ++ G 
Sbjct: 406 SLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGM 465

Query: 419 CKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDV 478
           C+A E++ A++L   +   G  P+  +Y+ ++ G C +       KL  E    G   + 
Sbjct: 466 CRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPND 525

Query: 479 SVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDD 538
             Y  + R F +  +      L   M   G   D    T L       G  ++   IL  
Sbjct: 526 CTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQILCK 585

Query: 539 ---MYRRRLMITL 548
              +Y R L  TL
Sbjct: 586 IVILYERNLGETL 598



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 102/364 (28%), Positives = 181/364 (49%), Gaps = 2/364 (0%)

Query: 203 YNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRME 262
           +N L+ +  K+     +  L  +M+   +  D++T   +I   C       A +   ++ 
Sbjct: 73  FNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKIL 132

Query: 263 REGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLE 320
           + G  PD  T+ +LI G C EG++ EA  LF  +  +G  PN VTY TLI+G C+  +  
Sbjct: 133 KLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTS 192

Query: 321 EALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLI 380
            A+RL   M      P VV +++++  LCK+ ++ +A  + +EM  K I+P+ VT N+LI
Sbjct: 193 AAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLI 252

Query: 381 NAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFS 440
           +  CK+ +      + N M+++ +M D FT   ++   CK   +  A +++  M+  G  
Sbjct: 253 HGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVE 312

Query: 441 PSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRL 500
           P+  +Y+ L+DG+C +N  +  +K+ D  V +    +V  Y  LI  +CK + VD A  L
Sbjct: 313 PNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYL 372

Query: 501 FNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAK 560
           F  M    +  ++V Y +L +     G  +    +  +M  R  +  L  YR+ S    K
Sbjct: 373 FEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCK 432

Query: 561 DNEI 564
           +  +
Sbjct: 433 NRHL 436



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/268 (23%), Positives = 108/268 (40%)

Query: 297 KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRD 356
           K   P+ V +  L+    +       L L   M + G+ P V T   ++  LC   R+  
Sbjct: 64  KQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDF 123

Query: 357 ANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIH 416
           A   L ++ +    PD  T  TLI   C  G    A+ + ++M+  G   +  TY  LI+
Sbjct: 124 AFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLIN 183

Query: 417 GFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCV 476
           G CK      A  LL  M      P+   +S L+D  C          +  E +++G+  
Sbjct: 184 GLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISP 243

Query: 477 DVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDIL 536
           ++  Y +LI   CK  +  +   L N M  + I+ D     ++  A  + G      D++
Sbjct: 244 NIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVV 303

Query: 537 DDMYRRRLMITLKIYRSFSASYAKDNEI 564
           D M  R +   +  Y +    +   NE+
Sbjct: 304 DMMIHRGVEPNVVTYNALMDGHCLRNEV 331



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 101/229 (44%)

Query: 317 NDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTC 376
           N L+EAL     M  K   P  V +N +L  + K         L  +M+   I PD  T 
Sbjct: 49  NTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTL 108

Query: 377 NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD 436
             +IN+ C +     A     ++L+ G   D  T+  LI G C   ++  A  L   M+ 
Sbjct: 109 AIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIG 168

Query: 437 AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDY 496
            GF P+  +Y  L++G C   N  A ++LL          +V V+  LI   CK  +V  
Sbjct: 169 EGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTE 228

Query: 497 AQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
           A  +F+ M   GI  + V Y SL +   +  E K  + ++++M   ++M
Sbjct: 229 AFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIM 277



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 51/234 (21%), Positives = 92/234 (39%), Gaps = 5/234 (2%)

Query: 340 TYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRM 399
           ++N+   K      + +A    N M  K+  P  V  N L+ +  K    ++ + +  +M
Sbjct: 37  SHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQM 96

Query: 400 LEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNE 459
              G+  D +T   +I+  C    +D A   L  +L  G  P   +++ L+ G C +   
Sbjct: 97  DSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKI 156

Query: 460 EALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
              L L D+ +  G   +V  Y  LI   CK      A RL   M+      + V++++L
Sbjct: 157 GEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTL 216

Query: 520 AYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVV 573
             +  +  +     +I  +M  + +   +  Y S      K  E     W HV 
Sbjct: 217 IDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCE-----WKHVT 265


>gi|414590917|tpg|DAA41488.1| TPA: hypothetical protein ZEAMMB73_494908 [Zea mays]
          Length = 601

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 121/382 (31%), Positives = 198/382 (51%), Gaps = 7/382 (1%)

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
           P+  + T+++  L   R TD    + + M   GV A++  Y  LI   C ++++D   +L
Sbjct: 113 PNAVSYTMVMRGLCASRRTDEAVALLRSMQASGVRADVVTYGTLIRGLCDAAELDGALEL 172

Query: 223 LCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR 282
           L EM    V  ++  Y+ L+  YC+ G   +   V + M R G+ PD++ +   I   C+
Sbjct: 173 LGEMCGSGVHPNVIVYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCK 232

Query: 283 EGRMREARRLFRDI---KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVV 339
           +GR+ +A ++ +DI   +G  PN VTY  LI+  C+   + EAL LR  M  KGV P VV
Sbjct: 233 KGRIGKAVKV-KDIMVQRGLEPNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVV 291

Query: 340 TYNSILRKLCKEGRIRDANRLLNEM--NEKKIAPDNVTCNTLINAYCKIGDTASAMKVKN 397
           TYN+++  L     +  A  LL EM   +  + PD VT N++I+  CKIG    A+ V+ 
Sbjct: 292 TYNTLIAGLSGVLEMDGAMGLLEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVRE 351

Query: 398 RMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKN 457
            M E G M +  TY  LI GF +  ++++A  L+  ++ +G  P   +YS L++G+    
Sbjct: 352 MMAERGCMCNLVTYNYLIGGFLRVHKVNMAMNLMSELISSGLEPDSFTYSILINGFSKLW 411

Query: 458 NEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYT 517
             +     L     RG+  ++  Y  L+   C+   ++ A  LFN M  N  L D+V Y+
Sbjct: 412 EVDRAEMFLRTMTQRGIRAELFHYIPLLAALCQLGMMEQAMVLFNEMDMNCGL-DAVAYS 470

Query: 518 SLAYAYWRAGEPKACSDILDDM 539
           ++ Y   ++G+ KA   +L DM
Sbjct: 471 TMMYGACKSGDIKAAKQLLQDM 492



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 131/465 (28%), Positives = 211/465 (45%), Gaps = 42/465 (9%)

Query: 144 KMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLY 203
           + T + + +   M+   +   +     L+  L      D   ++  +M   GV  N+ +Y
Sbjct: 129 RRTDEAVALLRSMQASGVRADVVTYGTLIRGLCDAAELDGALELLGEMCGSGVHPNVIVY 188

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER 263
           + L+   C+S     V K+  EM    V  D+  +   I   CKKG   +A+ V+D M +
Sbjct: 189 SCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQ 248

Query: 264 EGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEE 321
            G+ P++VTYN LI+  C+EG +REA  L  ++  KG  P+ VTY TLI G     +++ 
Sbjct: 249 RGLEPNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDG 308

Query: 322 ALRLREVMAAKG--VYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTL 379
           A+ L E M      V P VVT+NS++  LCK GR+R A  +   M E+    + VT N L
Sbjct: 309 AMGLLEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYL 368

Query: 380 INAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMD-------------I 426
           I  + ++     AM + + ++ +GL  D FTY  LI+GF K  E+D             I
Sbjct: 369 IGGFLRVHKVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQRGI 428

Query: 427 AKEL---------------------LFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKL 465
             EL                     LF  +D        +YS ++ G C   + +A  +L
Sbjct: 429 RAELFHYIPLLAALCQLGMMEQAMVLFNEMDMNCGLDAVAYSTMMYGACKSGDIKAAKQL 488

Query: 466 LDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWR 525
           L + +  GL  D   Y  LI  F K   ++ A+R+   M  +G + D  ++ SL   Y  
Sbjct: 489 LQDMLDEGLAPDAVTYSILINMFAKLGDLEEAERVLKQMAASGFVPDVAVFDSLIKGYSA 548

Query: 526 AGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWS 570
            G+     D++ +M  + + I  K    F  +  +  + + L WS
Sbjct: 549 EGQINKILDLIHEMRAKNVAIDPK----FICTLVRLPQQMPLLWS 589



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 118/396 (29%), Positives = 194/396 (48%), Gaps = 7/396 (1%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N  V S L+  Y      QD  +VF++M    + P +   T  ++ L K        KV 
Sbjct: 184 NVIVYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVK 243

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
             MVQ G+  N+  YNVLI+  CK   V +   L  EM+ K V  D+ TYNTLIA     
Sbjct: 244 DIMVQRGLEPNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGV 303

Query: 249 GMHYEALAVQDRMEREG--ISPDIVTYNSLIHGFCREGRMREA---RRLFRDIKGATPNH 303
                A+ + + M +    + PD+VT+NS+IHG C+ GRMR+A   R +  + +G   N 
Sbjct: 304 LEMDGAMGLLEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAE-RGCMCNL 362

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
           VTY  LI G+ R + +  A+ L   + + G+ P   TY+ ++    K   +  A   L  
Sbjct: 363 VTYNYLIGGFLRVHKVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRT 422

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
           M ++ I  +      L+ A C++G    AM + N M +    LD   Y  +++G CK+ +
Sbjct: 423 MTQRGIRAELFHYIPLLAALCQLGMMEQAMVLFNEM-DMNCGLDAVAYSTMMYGACKSGD 481

Query: 424 MDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRA 483
           +  AK+LL  MLD G +P   +YS L++ +    + E   ++L +  + G   DV+V+ +
Sbjct: 482 IKAAKQLLQDMLDEGLAPDAVTYSILINMFAKLGDLEEAERVLKQMAASGFVPDVAVFDS 541

Query: 484 LIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
           LI+ +  + +++    L + M+   +  D     +L
Sbjct: 542 LIKGYSAEGQINKILDLIHEMRAKNVAIDPKFICTL 577



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 96/306 (31%), Positives = 151/306 (49%), Gaps = 9/306 (2%)

Query: 228 FKDVRADLFTYNTLIALYCKKGMHY-EALAVQDRMEREG---ISPDIVTYNSLIHGFCRE 283
             DVR D  +YN ++A  C++G    +AL++   M RE      P+ V+Y  ++ G C  
Sbjct: 70  LPDVR-DAVSYNIVLAALCRRGGDLRQALSLLADMSREAHPAARPNAVSYTMVMRGLCAS 128

Query: 284 GRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTY 341
            R  EA  L R ++  G   + VTY TLI G C A +L+ AL L   M   GV+P V+ Y
Sbjct: 129 RRTDEAVALLRSMQASGVRADVVTYGTLIRGLCDAAELDGALELLGEMCGSGVHPNVIVY 188

Query: 342 NSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLE 401
           + +LR  C+ GR +D +++  EM+   + PD +     I+  CK G    A+KVK+ M++
Sbjct: 189 SCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQ 248

Query: 402 AGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEA 461
            GL  +  TY  LI+  CK   +  A  L   M D G +P   +Y+ L+ G       + 
Sbjct: 249 RGLEPNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDG 308

Query: 462 LLKLLDEFVSRGLCV--DVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
            + LL+E +     V  DV  + ++I   CK  ++  A  +  +M   G + + V Y  L
Sbjct: 309 AMGLLEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYL 368

Query: 520 AYAYWR 525
              + R
Sbjct: 369 IGGFLR 374


>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
          Length = 814

 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 121/402 (30%), Positives = 197/402 (49%), Gaps = 37/402 (9%)

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
           P++ A   +++   K+   +    ++K+MVQ G+  ++  YN ++HA CK+  +DK E  
Sbjct: 217 PNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAF 276

Query: 223 LCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR 282
           L +M  K V  + +TYN LI  Y   G   EA+ V   M R  I PD+VT + L+   C+
Sbjct: 277 LRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCK 336

Query: 283 EGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVT 340
            G+++EAR +F  +  KG  P+  +Y  +++GY     L +   L ++M   G+ P   T
Sbjct: 337 YGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYT 396

Query: 341 YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML 400
           +N +++     G +  A  + NEM +  + PD VT  T+I A C+IG    AM+  N+M+
Sbjct: 397 FNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMI 456

Query: 401 EAGLMLDQFTYKALIHGFCKAKEMDIAKELLF-----GM--------------------- 434
           + G+  D++ Y  LI GFC    +  AKEL+      GM                     
Sbjct: 457 DQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVM 516

Query: 435 ---------LDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
                    ++ G  P    YS L+DGYC     E  L++ D  VS G+  +V VY  L+
Sbjct: 517 DAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLV 576

Query: 486 RRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
             +CK  ++D    LF  M   GI   +++Y+ +    ++AG
Sbjct: 577 NGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAG 618



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 126/433 (29%), Positives = 211/433 (48%), Gaps = 16/433 (3%)

Query: 162 MPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVV--ANIHLYNVLIHACCKSSDVDKV 219
           +P + + ++LL SL     +     + + M + G V   N+  YN +I    K  DV+K 
Sbjct: 179 VPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKA 238

Query: 220 EKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHG 279
             L  EM  + +  DL TYN+++   CK     +A A   +M  + + P+  TYN+LI+G
Sbjct: 239 CDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYG 298

Query: 280 FCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPG 337
           +   G+ +EA R+F++++     P+ VT + L+   C+   ++EA  + + MA KG  P 
Sbjct: 299 YSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPD 358

Query: 338 VVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKN 397
           V +YN +L     +G + D   L + M    IAPD  T N LI AY   G    AM + N
Sbjct: 359 VFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFN 418

Query: 398 RMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKN 457
            M + G+  D  TY+ +I   C+  +MD A E    M+D G +P   +Y+ L+ G+C   
Sbjct: 419 EMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHG 478

Query: 458 NEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYT 517
           +     +L+ E ++ G+ +D+  + ++I   CK  +V  AQ +F+L    G+  D+V+Y+
Sbjct: 479 SLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYS 538

Query: 518 SLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGL 577
            L   Y   G+ +    + D M    +   + +Y +    Y K   I         D GL
Sbjct: 539 MLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRI---------DEGL 589

Query: 578 MSKHIFKEMQLRN 590
               +F+EM  R 
Sbjct: 590 ---SLFREMLQRG 599



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 125/517 (24%), Positives = 228/517 (44%), Gaps = 26/517 (5%)

Query: 60  SCAFFK-WAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNA 118
           +C  FK   +  +P     L ++ +++H L K +    A+  L ++  +  L      N 
Sbjct: 238 ACDLFKEMVQRGIP---PDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNN 294

Query: 119 LVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKD 178
           L+       G S    W           ++ ++VF +MR H+++P +   ++L+ SL K 
Sbjct: 295 LIY------GYSSTGQW-----------KEAVRVFKEMRRHSILPDVVTLSMLMGSLCKY 337

Query: 179 RLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTY 238
                   V+  M   G   ++  YN++++       +  +  L   M    +  D +T+
Sbjct: 338 GKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTF 397

Query: 239 NTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI-- 296
           N LI  Y   GM  +A+ + + M   G+ PD+VTY ++I   CR G+M +A   F  +  
Sbjct: 398 NVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMID 457

Query: 297 KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRD 356
           +G  P+   Y  LI G+C    L +A  L   +   G++  +V ++SI+  LCK GR+ D
Sbjct: 458 QGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMD 517

Query: 357 ANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIH 416
           A  + +      + PD V  + L++ YC +G    A++V + M+ AG+  +   Y  L++
Sbjct: 518 AQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVN 577

Query: 417 GFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCV 476
           G+CK   +D    L   ML  G  PS   YS ++DG               E    G+ +
Sbjct: 578 GYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAM 637

Query: 477 DVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDIL 536
           D+  Y  ++R   K    D A  LF  ++   +  + +   ++    ++    +   D+ 
Sbjct: 638 DICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLF 697

Query: 537 DDMYRRRLMITLKIYRSFSASYAKDN---EILDLFWS 570
             + R RL+ ++  Y     +  K+    E  D+F S
Sbjct: 698 ASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSS 734



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 110/407 (27%), Positives = 180/407 (44%), Gaps = 42/407 (10%)

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLA-KDRLTDMVWKVYKKMVQLGVVA 198
           Y  +K  +D   VFD M +    P + +  ++LN  A K  L DM   ++  M+  G+  
Sbjct: 337 YGKIKEARD---VFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMT-DLFDLMLGDGIAP 392

Query: 199 NIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQ 258
           + + +NVLI A      +DK   +  EM    V+ D+ TY T+IA  C+ G   +A+   
Sbjct: 393 DFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKF 452

Query: 259 DRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--------------------- 297
           ++M  +G++PD   YN LI GFC  G + +A+ L  +I                      
Sbjct: 453 NQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKL 512

Query: 298 ----------------GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTY 341
                           G  P+ V Y+ L+DGYC    +E+ALR+ + M + G+ P VV Y
Sbjct: 513 GRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVY 572

Query: 342 NSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLE 401
            +++   CK GRI +   L  EM ++ I P  +  + +I+   + G T  A    + M E
Sbjct: 573 CTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTE 632

Query: 402 AGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEA 461
           +G+ +D  TY  ++ G  K +  D A  L   +       +  + + ++DG       E 
Sbjct: 633 SGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEE 692

Query: 462 LLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG 508
              L        L   V  Y  +I    K+  V+ A+ +F+ MQ  G
Sbjct: 693 AKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAG 739



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 86/315 (27%), Positives = 142/315 (45%), Gaps = 40/315 (12%)

Query: 254 ALAVQDRMEREGISPDIVTYNSLIHGFCR------------------------------- 282
           ALA   ++ R G+  +I+  N L+ GFC                                
Sbjct: 130 ALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILL 189

Query: 283 -----EGRMREARRLFRDIK--GA--TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKG 333
                +G+  +A  L R +   GA  +PN V Y T+IDG+ +  D+ +A  L + M  +G
Sbjct: 190 KSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRG 249

Query: 334 VYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAM 393
           + P +VTYNS++  LCK   +  A   L +M  K++ P+N T N LI  Y   G    A+
Sbjct: 250 IPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAV 309

Query: 394 KVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGY 453
           +V   M    ++ D  T   L+   CK  ++  A+++   M   G +P   SY+ +++GY
Sbjct: 310 RVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGY 369

Query: 454 CNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDS 513
             K     +  L D  +  G+  D   +  LI+ +     +D A  +FN M+ +G+  D 
Sbjct: 370 ATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDV 429

Query: 514 VIYTSLAYAYWRAGE 528
           V Y ++  A  R G+
Sbjct: 430 VTYRTVIAALCRIGK 444



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 71/278 (25%), Positives = 116/278 (41%), Gaps = 38/278 (13%)

Query: 300 TPNHVTYTTLID-----------------------------------GYCRANDLEEALR 324
           +P   TY  L+D                                   G+C A   +EAL 
Sbjct: 108 SPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALD 167

Query: 325 -LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI--APDNVTCNTLIN 381
            L       G  P V +Y+ +L+ LC +G+   A+ LL  M E     +P+ V  NT+I+
Sbjct: 168 ILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVID 227

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
            + K GD   A  +   M++ G+  D  TY +++H  CKA+ MD A+  L  M++    P
Sbjct: 228 GFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLP 287

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
           +  +Y+ L+ GY +    +  +++  E     +  DV     L+   CK  K+  A+ +F
Sbjct: 288 NNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVF 347

Query: 502 NLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
           + M   G   D   Y  +   Y   G     +D+ D M
Sbjct: 348 DTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLM 385



 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 51/243 (20%), Positives = 95/243 (39%), Gaps = 41/243 (16%)

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
           + ++P + T   L++   +      A+    ++L  GL ++      L+ GFC+AK  D 
Sbjct: 105 RVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDE 164

Query: 427 AKELLF--------------------GMLDAG------------------FSPSYCSYSW 448
           A ++L                      + D G                   SP+  +Y+ 
Sbjct: 165 ALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNT 224

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG 508
           ++DG+  + +      L  E V RG+  D+  Y +++   CK   +D A+     M    
Sbjct: 225 VIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKR 284

Query: 509 ILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM---ITLKIYRSFSASYAKDNEIL 565
           +L ++  Y +L Y Y   G+ K    +  +M R  ++   +TL +       Y K  E  
Sbjct: 285 VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEAR 344

Query: 566 DLF 568
           D+F
Sbjct: 345 DVF 347


>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Glycine max]
          Length = 725

 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 166/593 (27%), Positives = 253/593 (42%), Gaps = 69/593 (11%)

Query: 25  HWAKLLNP----NIASSLTSTAIHKV----LLNLYNCCHIPSLSCAFFKWAESAVPNYKH 76
            W +LL P     +  SL+ T I       LL L     IP+ S   F+ A  A   Y H
Sbjct: 42  EWERLLKPFDLKQLRRSLSLTPISPFQLCKLLELP--LDIPT-SMELFQRA-GAQKGYSH 97

Query: 77  SLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDD---PDGNSHVL 133
           +  + + +I  L     FK  + +L+++     L   S+   ++K +     P   + +L
Sbjct: 98  TFDACYLLIDKLGAVGDFKVIEKLLKQMKDEGLLFKESLFILIMKHYGKAGLPGQATRLL 157

Query: 134 --SWLVI--------FYANLKMTQDG------LQVFDQMRVHNLMPHLHACTVLLNSLAK 177
              W V         +   L +  DG        VF  M    + P ++   V++ +L  
Sbjct: 158 LDMWGVYSCDPTFKSYNVVLDILVDGDCPRVAPNVFYDMLSRGVSPTVYTFGVVMKALCM 217

Query: 178 DRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFT 237
               D    + + M + G V N  +Y  LIHA C+++ V +  +LL +M       D+ T
Sbjct: 218 VSEVDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQT 277

Query: 238 YNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK 297
           +N +I   C+ G  +EA  + DRM   G S D +TY  L+HG CR G++ EAR L   I 
Sbjct: 278 FNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKI- 336

Query: 298 GATPNHVTYTTLIDGYCRANDLEE------------------------------------ 321
              PN V Y TLI GY  +   EE                                    
Sbjct: 337 -PNPNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVS 395

Query: 322 ALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
           AL L   M AK   P V+TY  ++   CK+GR+ +A  ++N M+ K ++ + V  N LI 
Sbjct: 396 ALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLIC 455

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
           A CK G+   A+++   M   G   D +T+ +LI+G CK  +M+ A  L   M   G   
Sbjct: 456 ALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIA 515

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
           +  +Y+ LV  +  +++ +   KL+DE + RG  +D   Y  LI+  CK   V+    LF
Sbjct: 516 NTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLF 575

Query: 502 NLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSF 554
             M G GI    +    L     R G+       L DM  R L   +  Y S 
Sbjct: 576 EEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSL 628



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 110/333 (33%), Positives = 165/333 (49%), Gaps = 3/333 (0%)

Query: 198 ANIHLYNVLIHACCKSSDVDKVEKLLCE-MEFKDVRADLFTYNTLIALYCKKGMHYEALA 256
            N  LYN LI     S   ++ + LL   M       D +T+N +I    KKG    AL 
Sbjct: 339 PNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALE 398

Query: 257 VQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYC 314
           + + M  +   P+++TY  LI+GFC++GR+ EA  +   +  KG + N V Y  LI   C
Sbjct: 399 LLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALC 458

Query: 315 RANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNV 374
           +  ++EEAL+L   M+ KG  P + T+NS++  LCK  ++ +A  L ++M  + +  + V
Sbjct: 459 KDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTV 518

Query: 375 TCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGM 434
           T NTL++A+        A K+ + ML  G  LD  TY  LI   CK   ++    L   M
Sbjct: 519 TYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEM 578

Query: 435 LDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKV 494
           L  G  P+  S + L+ G C        LK L + + RGL  D+  Y +LI   CK   V
Sbjct: 579 LGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHV 638

Query: 495 DYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
             A  LFN +Q  GI  D++ Y +L   +   G
Sbjct: 639 QEASNLFNKLQSEGIRPDAITYNTLISRHCHEG 671



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 94/304 (30%), Positives = 164/304 (53%), Gaps = 2/304 (0%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           L++ ++M      P++   T+L+N   K    +   ++   M   G+  N   YN LI A
Sbjct: 397 LELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICA 456

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
            CK  ++++  +L  EM  K  + D++T+N+LI   CK     EAL++   M  EG+  +
Sbjct: 457 LCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIAN 516

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLRE 327
            VTYN+L+H F     +++A +L  ++  +G   +++TY  LI   C+   +E+ L L E
Sbjct: 517 TVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFE 576

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
            M  KG++P +++ N ++  LC+ G++ DA + L +M  + + PD VT N+LIN  CK+G
Sbjct: 577 EMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMG 636

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
               A  + N++   G+  D  TY  LI   C     + A  LL+  +D+GF P+  ++S
Sbjct: 637 HVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSGFIPNEVTWS 696

Query: 448 WLVD 451
            L++
Sbjct: 697 ILIN 700



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 115/431 (26%), Positives = 203/431 (47%), Gaps = 17/431 (3%)

Query: 78  LQSHWTMIHILTKNKHFKSAQNMLEKIALRDF----LSTPSVLNALVK----------IH 123
           +Q+   +IH L +      A  +L+++ LR F    L+   +++ L +          ++
Sbjct: 275 VQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLN 334

Query: 124 DDPDGNSHVLSWLVIFY-ANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTD 182
             P+ N+ + + L+  Y A+ +  +    +++ M +    P  +   ++++ L K     
Sbjct: 335 KIPNPNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLV 394

Query: 183 MVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLI 242
              ++  +MV      N+  Y +LI+  CK   +++  +++  M  K +  +   YN LI
Sbjct: 395 SALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLI 454

Query: 243 ALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGAT 300
              CK G   EAL +   M  +G  PDI T+NSLI+G C+  +M EA  L+ D  ++G  
Sbjct: 455 CALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVI 514

Query: 301 PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRL 360
            N VTY TL+  +   + +++A +L + M  +G     +TYN +++ LCK G +     L
Sbjct: 515 ANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGL 574

Query: 361 LNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCK 420
             EM  K I P  ++CN LI+  C+ G    A+K    M+  GL  D  TY +LI+G CK
Sbjct: 575 FEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCK 634

Query: 421 AKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSV 480
              +  A  L   +   G  P   +Y+ L+  +C++        LL + V  G   +   
Sbjct: 635 MGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSGFIPNEVT 694

Query: 481 YRALIRRFCKK 491
           +  LI    KK
Sbjct: 695 WSILINYIVKK 705



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 100/429 (23%), Positives = 183/429 (42%), Gaps = 42/429 (9%)

Query: 205 VLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL-AVQDRMER 263
           +LI       D   +EKLL +M+ + +      +  ++  Y K G+  +A   + D    
Sbjct: 104 LLIDKLGAVGDFKVIEKLLKQMKDEGLLFKESLFILIMKHYGKAGLPGQATRLLLDMWGV 163

Query: 264 EGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEE 321
               P   +YN ++         R A  +F D+  +G +P   T+  ++   C  ++++ 
Sbjct: 164 YSCDPTFKSYNVVLDILVDGDCPRVAPNVFYDMLSRGVSPTVYTFGVVMKALCMVSEVDS 223

Query: 322 ALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
           A  L   MA  G  P  V Y +++  LC+  R+ +A +LL +M      PD  T N +I+
Sbjct: 224 ACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIH 283

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMD---------------- 425
             C+ G    A K+ +RML  G   D  TY  L+HG C+  ++D                
Sbjct: 284 GLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIPNPNTVL 343

Query: 426 ---------------IAKELLF-GMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEF 469
                           AK+LL+  M+ AG+ P   +++ ++DG   K    + L+LL+E 
Sbjct: 344 YNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEM 403

Query: 470 VSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEP 529
           V++    +V  Y  LI  FCK+ +++ A  + N M   G+  ++V Y  L  A  + G  
Sbjct: 404 VAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNI 463

Query: 530 KACSDILDDMYRRRLMITLKIYRSFSASYAKDNEIL-------DLFWSHVVDRGLMSKHI 582
           +    +  +M  +     +  + S      K++++        D+F   V+   +    +
Sbjct: 464 EEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTL 523

Query: 583 FKEMQLRNS 591
                +R+S
Sbjct: 524 VHAFLMRDS 532


>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 588

 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 128/441 (29%), Positives = 205/441 (46%), Gaps = 37/441 (8%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           + L  F++M      P       LL S+AK +    +  + ++M   G+  +++   ++I
Sbjct: 53  EALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVI 112

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           ++ C  + VD     L ++     + D  T+ TLI   C +G   EAL + D+M  EG  
Sbjct: 113 NSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQ 172

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDIKGAT--PNHVTYTTLIDGYCRANDLEEALRL 325
           P++VTY +LI+G C+ G    A RL R ++     PN V ++TLID  C+   + EA  +
Sbjct: 173 PNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNI 232

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
              M  KG+ P +VTYNS++  LCK    +    L+NEM + KI PD  T NT+++A CK
Sbjct: 233 FSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCK 292

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKAL------------------------------- 414
            G  A A  V + M+  G+  +  TY AL                               
Sbjct: 293 EGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVIS 352

Query: 415 ----IHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFV 470
               I+G+CK + +D A  L   M     +P+  +Y+ L+ G C+    +  + L  E V
Sbjct: 353 YNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMV 412

Query: 471 SRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPK 530
           +RG   D+  YR L    CK   +D A  L   ++G+    D  IYT++     RAGE +
Sbjct: 413 ARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELE 472

Query: 531 ACSDILDDMYRRRLMITLKIY 551
              D+  ++  + L   +  Y
Sbjct: 473 DARDLFSNLSSKGLQPNVWTY 493



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 117/431 (27%), Positives = 204/431 (47%), Gaps = 4/431 (0%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           S L  ++K+   PD  +   + L+          + L +FD+M      P++     L+N
Sbjct: 126 SALAKILKLGHQPDATT--FTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLIN 183

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
            L K   T    ++ + M Q     N+ +++ LI + CK   V +   +  EM  K +  
Sbjct: 184 GLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISP 243

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           ++ TYN+LI   CK         + + M    I PD+ T N+++   C+EG + EA  + 
Sbjct: 244 NIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVV 303

Query: 294 RDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
             +  +G  PN VTY  L+DG+C  N+++ A+++ + M  K     V++YN+++   CK 
Sbjct: 304 DMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKI 363

Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
             +  A  L  EM+ +++ P+ VT NTLI+  C +G    A+ + + M+  G + D  TY
Sbjct: 364 QSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTY 423

Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
           + L    CK + +D A  LL  +  + + P    Y+ ++DG C     E    L     S
Sbjct: 424 RTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSS 483

Query: 472 RGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKA 531
           +GL  +V  Y  +I   CK+  +  A +LF+ M  NG   +   Y  +   + R  E   
Sbjct: 484 KGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALR 543

Query: 532 CSDILDDMYRR 542
             ++L++M  R
Sbjct: 544 TIELLEEMLAR 554



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 133/473 (28%), Positives = 221/473 (46%), Gaps = 62/473 (13%)

Query: 54  CHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDF---- 109
           CH+  +  AF   A+     ++    +  T+I  L        A ++ +K+    F    
Sbjct: 116 CHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNV 175

Query: 110 LSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACT 169
           ++  +++N L K+     GN                T   +++   M   N  P++   +
Sbjct: 176 VTYGTLINGLCKV-----GN----------------TSAAIRLLRSMEQGNCQPNVVVFS 214

Query: 170 VLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFK 229
            L++SL KDR     + ++ +M+  G+  NI  YN LIH  CK  +   V  L+ EM   
Sbjct: 215 TLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDS 274

Query: 230 DVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA 289
            +  D+FT NT++   CK+GM  EA  V D M   G+ P++VTYN+L+ G C    +  A
Sbjct: 275 KIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVA 334

Query: 290 RRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRK 347
            ++F  +  K    N ++Y TLI+GYC+   +++A+ L E M+ + + P  VTYN+++  
Sbjct: 335 VKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHG 394

Query: 348 LCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLD 407
           LC  GR++DA  L +EM  +   PD VT  TL +  CK      AM +   +  +    D
Sbjct: 395 LCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPD 454

Query: 408 QFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYC------------- 454
              Y  ++ G C+A E++ A++L   +   G  P+  +Y+ ++ G C             
Sbjct: 455 IQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFS 514

Query: 455 --NKN------------------NEEAL--LKLLDEFVSRGLCVDVSVYRALI 485
             NKN                  N EAL  ++LL+E ++RG  VDVS    L+
Sbjct: 515 EMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLV 567



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 102/364 (28%), Positives = 181/364 (49%), Gaps = 2/364 (0%)

Query: 203 YNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRME 262
           +N L+ +  K+     +  L  +M+   +  D++T   +I   C       A +   ++ 
Sbjct: 73  FNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKIL 132

Query: 263 REGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLE 320
           + G  PD  T+ +LI G C EG++ EA  LF  +  +G  PN VTY TLI+G C+  +  
Sbjct: 133 KLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTS 192

Query: 321 EALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLI 380
            A+RL   M      P VV +++++  LCK+ ++ +A  + +EM  K I+P+ VT N+LI
Sbjct: 193 AAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLI 252

Query: 381 NAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFS 440
           +  CK+ +      + N M+++ +M D FT   ++   CK   +  A +++  M+  G  
Sbjct: 253 HGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVE 312

Query: 441 PSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRL 500
           P+  +Y+ L+DG+C +N  +  +K+ D  V +    +V  Y  LI  +CK + VD A  L
Sbjct: 313 PNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYL 372

Query: 501 FNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAK 560
           F  M    +  ++V Y +L +     G  +    +  +M  R  +  L  YR+ S    K
Sbjct: 373 FEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCK 432

Query: 561 DNEI 564
           +  +
Sbjct: 433 NRHL 436



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 98/321 (30%), Positives = 169/321 (52%), Gaps = 2/321 (0%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           + ++M    +MP +     ++++L K+ +      V   M+  GV  N+  YN L+   C
Sbjct: 267 LMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHC 326

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
             ++VD   K+   M  KD  A++ +YNTLI  YCK     +A+ + + M R+ ++P+ V
Sbjct: 327 LRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTV 386

Query: 272 TYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           TYN+LIHG C  GR+++A  LF ++  +G  P+ VTY TL D  C+   L++A+ L + +
Sbjct: 387 TYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAI 446

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
                 P +  Y +IL  +C+ G + DA  L + ++ K + P+  T N +I+  CK G  
Sbjct: 447 EGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLL 506

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
           A A K+ + M + G   +  TY  +  GF +  E     ELL  ML  GFS    + + L
Sbjct: 507 AEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLL 566

Query: 450 VDGYCNKNNEEALLKLLDEFV 470
           V    +   ++++ ++L ++V
Sbjct: 567 VGMLSDDGLDQSVKQILCKYV 587



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 101/229 (44%)

Query: 317 NDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTC 376
           N L+EAL     M  K   P  V +N +L  + K         L  +M+   I PD  T 
Sbjct: 49  NTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTL 108

Query: 377 NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD 436
             +IN+ C +     A     ++L+ G   D  T+  LI G C   ++  A  L   M+ 
Sbjct: 109 AIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIG 168

Query: 437 AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDY 496
            GF P+  +Y  L++G C   N  A ++LL          +V V+  LI   CK  +V  
Sbjct: 169 EGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTE 228

Query: 497 AQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
           A  +F+ M   GI  + V Y SL +   +  E K  + ++++M   ++M
Sbjct: 229 AFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIM 277



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/268 (23%), Positives = 108/268 (40%)

Query: 297 KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRD 356
           K   P+ V +  L+    +       L L   M + G+ P V T   ++  LC   R+  
Sbjct: 64  KQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDF 123

Query: 357 ANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIH 416
           A   L ++ +    PD  T  TLI   C  G    A+ + ++M+  G   +  TY  LI+
Sbjct: 124 AFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLIN 183

Query: 417 GFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCV 476
           G CK      A  LL  M      P+   +S L+D  C          +  E +++G+  
Sbjct: 184 GLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISP 243

Query: 477 DVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDIL 536
           ++  Y +LI   CK  +  +   L N M  + I+ D     ++  A  + G      D++
Sbjct: 244 NIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVV 303

Query: 537 DDMYRRRLMITLKIYRSFSASYAKDNEI 564
           D M  R +   +  Y +    +   NE+
Sbjct: 304 DMMIHRGVEPNVVTYNALMDGHCLRNEV 331



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 51/234 (21%), Positives = 92/234 (39%), Gaps = 5/234 (2%)

Query: 340 TYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRM 399
           ++N+   K      + +A    N M  K+  P  V  N L+ +  K    ++ + +  +M
Sbjct: 37  SHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQM 96

Query: 400 LEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNE 459
              G+  D +T   +I+  C    +D A   L  +L  G  P   +++ L+ G C +   
Sbjct: 97  DSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKI 156

Query: 460 EALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
              L L D+ +  G   +V  Y  LI   CK      A RL   M+      + V++++L
Sbjct: 157 GEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTL 216

Query: 520 AYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVV 573
             +  +  +     +I  +M  + +   +  Y S      K  E     W HV 
Sbjct: 217 IDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCE-----WKHVT 265


>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
          Length = 827

 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 131/460 (28%), Positives = 215/460 (46%), Gaps = 56/460 (12%)

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
           P++ A   +++   K+   +    ++K+MVQ G+  ++  YN ++HA CK+  +DK E  
Sbjct: 230 PNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAF 289

Query: 223 LCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR 282
           L +M  K V  + +TYN LI  Y   G   EA+ V   M R  I PD+VT + L+   C+
Sbjct: 290 LRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCK 349

Query: 283 EGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVT 340
            G+++EAR +F  +  KG  P+  +Y  +++GY     L +   L ++M   G+ P   T
Sbjct: 350 YGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYT 409

Query: 341 YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML 400
           +N +++     G +  A  + NEM +  + PD VT  T+I A C+IG    AM+  N+M+
Sbjct: 410 FNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMI 469

Query: 401 EAGLMLDQFTYKALIHGFCKAKEMDIAKELLF-----GM--------------------- 434
           + G+  D++ Y  LI GFC    +  AKEL+      GM                     
Sbjct: 470 DQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVM 529

Query: 435 ---------LDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
                    ++ G  P    YS L+DGYC     E  L++ D  VS G+  +V VY  L+
Sbjct: 530 DAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLV 589

Query: 486 RRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
             +CK  ++D    LF  M   GI   +++Y+ +    ++AG              R + 
Sbjct: 590 NGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAG--------------RTVP 635

Query: 546 ITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKE 585
             +K +    +  A     +D+   ++V RGL     F E
Sbjct: 636 AKMKFHEMTESGIA-----MDICTYNIVLRGLFKNRCFDE 670



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 126/433 (29%), Positives = 211/433 (48%), Gaps = 16/433 (3%)

Query: 162 MPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVV--ANIHLYNVLIHACCKSSDVDKV 219
           +P + + ++LL SL     +     + + M + G V   N+  YN +I    K  DV+K 
Sbjct: 192 VPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKA 251

Query: 220 EKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHG 279
             L  EM  + +  DL TYN+++   CK     +A A   +M  + + P+  TYN+LI+G
Sbjct: 252 CDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYG 311

Query: 280 FCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPG 337
           +   G+ +EA R+F++++     P+ VT + L+   C+   ++EA  + + MA KG  P 
Sbjct: 312 YSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPD 371

Query: 338 VVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKN 397
           V +YN +L     +G + D   L + M    IAPD  T N LI AY   G    AM + N
Sbjct: 372 VFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFN 431

Query: 398 RMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKN 457
            M + G+  D  TY+ +I   C+  +MD A E    M+D G +P   +Y+ L+ G+C   
Sbjct: 432 EMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHG 491

Query: 458 NEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYT 517
           +     +L+ E ++ G+ +D+  + ++I   CK  +V  AQ +F+L    G+  D+V+Y+
Sbjct: 492 SLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYS 551

Query: 518 SLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGL 577
            L   Y   G+ +    + D M    +   + +Y +    Y K   I         D GL
Sbjct: 552 MLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRI---------DEGL 602

Query: 578 MSKHIFKEMQLRN 590
               +F+EM  R 
Sbjct: 603 ---SLFREMLQRG 612



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 125/517 (24%), Positives = 227/517 (43%), Gaps = 26/517 (5%)

Query: 60  SCAFFK-WAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNA 118
           +C  FK   +  +P     L ++ +++H L K +    A+  L ++  +  L      N 
Sbjct: 251 ACDLFKEMVQRGIP---PDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNN 307

Query: 119 LVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKD 178
           L+       G S    W           ++ ++VF +MR H+++P +   ++L+ SL K 
Sbjct: 308 LIY------GYSSTGQW-----------KEAVRVFKEMRRHSILPDVVTLSMLMGSLCKY 350

Query: 179 RLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTY 238
                   V+  M   G   ++  YN++++       +  +  L   M    +  D +T+
Sbjct: 351 GKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTF 410

Query: 239 NTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI-- 296
           N LI  Y   GM  +A+ + + M   G+ PD+VTY ++I   CR G+M +A   F  +  
Sbjct: 411 NVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMID 470

Query: 297 KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRD 356
           +G  P+   Y  LI G+C    L +A  L   +   G++  +V ++SI+  LCK GR+ D
Sbjct: 471 QGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMD 530

Query: 357 ANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIH 416
           A  + +      + PD V  + L++ YC +G    A++V + M+ AG+  +   Y  L++
Sbjct: 531 AQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVN 590

Query: 417 GFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCV 476
           G+CK   +D    L   ML  G  PS   YS ++DG               E    G+ +
Sbjct: 591 GYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAM 650

Query: 477 DVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDIL 536
           D+  Y  ++R   K    D A  LF  ++   +  + +   ++    ++    +   D+ 
Sbjct: 651 DICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLF 710

Query: 537 DDMYRRRLMITLKIYRSFSASYAKDN---EILDLFWS 570
             + R RL+  +  Y     +  K+    E  D+F S
Sbjct: 711 ASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSS 747



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 110/407 (27%), Positives = 181/407 (44%), Gaps = 42/407 (10%)

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLA-KDRLTDMVWKVYKKMVQLGVVA 198
           Y  +K  +D   VFD M +    P + +  ++LN  A K  L DM   ++  M+  G+  
Sbjct: 350 YGKIKEARD---VFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMT-DLFDLMLGDGIAP 405

Query: 199 NIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQ 258
           + + +NVLI A      +DK   +  EM    V+ D+ TY T+IA  C+ G   +A+   
Sbjct: 406 DFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKF 465

Query: 259 DRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--------------------- 297
           ++M  +G++PD   YN LI GFC  G + +A+ L  +I                      
Sbjct: 466 NQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKL 525

Query: 298 ----------------GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTY 341
                           G  P+ V Y+ L+DGYC    +E+ALR+ + M + G+ P VV Y
Sbjct: 526 GRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVY 585

Query: 342 NSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLE 401
            +++   CK GRI +   L  EM ++ I P  +  + +I+   + G T  A    + M E
Sbjct: 586 CTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTE 645

Query: 402 AGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEA 461
           +G+ +D  TY  ++ G  K +  D A  L   +       +  + + ++DG       E 
Sbjct: 646 SGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEE 705

Query: 462 LLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG 508
              L        L  +V  Y  +I    K+  V+ A+ +F+ MQ  G
Sbjct: 706 AKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAG 752



 Score =  121 bits (304), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 86/315 (27%), Positives = 142/315 (45%), Gaps = 40/315 (12%)

Query: 254 ALAVQDRMEREGISPDIVTYNSLIHGFCR------------------------------- 282
           ALA   ++ R G+  +I+  N L+ GFC                                
Sbjct: 143 ALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILL 202

Query: 283 -----EGRMREARRLFRDIK--GA--TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKG 333
                +G+  +A  L R +   GA  +PN V Y T+IDG+ +  D+ +A  L + M  +G
Sbjct: 203 KSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRG 262

Query: 334 VYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAM 393
           + P +VTYNS++  LCK   +  A   L +M  K++ P+N T N LI  Y   G    A+
Sbjct: 263 IPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAV 322

Query: 394 KVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGY 453
           +V   M    ++ D  T   L+   CK  ++  A+++   M   G +P   SY+ +++GY
Sbjct: 323 RVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGY 382

Query: 454 CNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDS 513
             K     +  L D  +  G+  D   +  LI+ +     +D A  +FN M+ +G+  D 
Sbjct: 383 ATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDV 442

Query: 514 VIYTSLAYAYWRAGE 528
           V Y ++  A  R G+
Sbjct: 443 VTYRTVIAALCRIGK 457



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 91/408 (22%), Positives = 164/408 (40%), Gaps = 72/408 (17%)

Query: 131 HVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKK 190
           +  + L+  YAN  M    + +F++MR H + P +     ++ +L +    D   + + +
Sbjct: 408 YTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQ 467

Query: 191 MVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCE------------------------- 225
           M+  GV  + + YN LI   C    + K ++L+ E                         
Sbjct: 468 MIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGR 527

Query: 226 -MEFKDV---------RADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNS 275
            M+ +++           D   Y+ L+  YC  G   +AL V D M   GI P++V Y +
Sbjct: 528 VMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCT 587

Query: 276 LIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKG 333
           L++G+C+ GR+ E   LFR++  +G  P+ + Y+ +IDG  +A     A      M   G
Sbjct: 588 LVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESG 647

Query: 334 VYPGVVTYNSILRKLCK------------------------------EG-----RIRDAN 358
           +   + TYN +LR L K                              +G     R+ +A 
Sbjct: 648 IAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAK 707

Query: 359 RLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGF 418
            L   ++  ++ P+ VT + +I    K G    A  + + M  AG   +      ++   
Sbjct: 708 DLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVREL 767

Query: 419 CKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLL 466
            K  E+  A   L  + +  FS  + +   LVD + +K      ++ L
Sbjct: 768 LKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRFL 815



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 71/278 (25%), Positives = 116/278 (41%), Gaps = 38/278 (13%)

Query: 300 TPNHVTYTTLID-----------------------------------GYCRANDLEEALR 324
           +P   TY  L+D                                   G+C A   +EAL 
Sbjct: 121 SPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALD 180

Query: 325 -LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI--APDNVTCNTLIN 381
            L       G  P V +Y+ +L+ LC +G+   A+ LL  M E     +P+ V  NT+I+
Sbjct: 181 ILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVID 240

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
            + K GD   A  +   M++ G+  D  TY +++H  CKA+ MD A+  L  M++    P
Sbjct: 241 GFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLP 300

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
           +  +Y+ L+ GY +    +  +++  E     +  DV     L+   CK  K+  A+ +F
Sbjct: 301 NNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVF 360

Query: 502 NLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
           + M   G   D   Y  +   Y   G     +D+ D M
Sbjct: 361 DTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLM 398



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/243 (20%), Positives = 95/243 (39%), Gaps = 41/243 (16%)

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
           + ++P + T   L++   +      A+    ++L  GL ++      L+ GFC+AK  D 
Sbjct: 118 RVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDE 177

Query: 427 AKELLF--------------------GMLDAG------------------FSPSYCSYSW 448
           A ++L                      + D G                   SP+  +Y+ 
Sbjct: 178 ALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNT 237

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG 508
           ++DG+  + +      L  E V RG+  D+  Y +++   CK   +D A+     M    
Sbjct: 238 VIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKR 297

Query: 509 ILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM---ITLKIYRSFSASYAKDNEIL 565
           +L ++  Y +L Y Y   G+ K    +  +M R  ++   +TL +       Y K  E  
Sbjct: 298 VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEAR 357

Query: 566 DLF 568
           D+F
Sbjct: 358 DVF 360


>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g64320, mitochondrial; Flags: Precursor
 gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 730

 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 128/454 (28%), Positives = 218/454 (48%), Gaps = 32/454 (7%)

Query: 81  HWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFY 140
           + T+IH L+K      A  +LE++ L   +               PD  +   + +++  
Sbjct: 255 YQTLIHSLSKCNRVNEALQLLEEMFLMGCV---------------PD--AETFNDVILGL 297

Query: 141 ANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAK----DRLTDMVWKVYKKMVQLGV 196
                  +  ++ ++M +    P       L+N L K    D   D+ +++ K       
Sbjct: 298 CKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK------- 350

Query: 197 VANIHLYNVLIHACCKSSDVDKVEKLLCEMEFK-DVRADLFTYNTLIALYCKKGMHYEAL 255
              I ++N LIH       +D  + +L +M     +  D+ TYN+LI  Y K+G+   AL
Sbjct: 351 -PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLAL 409

Query: 256 AVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGY 313
            V   M  +G  P++ +Y  L+ GFC+ G++ EA  +  ++   G  PN V +  LI  +
Sbjct: 410 EVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAF 469

Query: 314 CRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDN 373
           C+ + + EA+ +   M  KG  P V T+NS++  LC+   I+ A  LL +M  + +  + 
Sbjct: 470 CKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANT 529

Query: 374 VTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFG 433
           VT NTLINA+ + G+   A K+ N M+  G  LD+ TY +LI G C+A E+D A+ L   
Sbjct: 530 VTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEK 589

Query: 434 MLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEK 493
           ML  G +PS  S + L++G C     E  ++   E V RG   D+  + +LI   C+  +
Sbjct: 590 MLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGR 649

Query: 494 VDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
           ++    +F  +Q  GI  D+V + +L     + G
Sbjct: 650 IEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGG 683



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 147/543 (27%), Positives = 238/543 (43%), Gaps = 32/543 (5%)

Query: 25  HWAKLLNPNIASSLTSTAIHKVL-LNLYNCCHIP---SLSCAFFKWAESAVPNYKHSLQS 80
            W KLL P    SL ++  HK+    LY    +P   S S   F W  S    Y+HS   
Sbjct: 56  EWEKLLKPFDLDSLRNS-FHKITPFQLYKLLELPLNVSTSMELFSWTGSQ-NGYRHSFDV 113

Query: 81  HWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHD---------------- 124
           +  +I  L  N  FK+   +L ++     +   S+  ++++ +D                
Sbjct: 114 YQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMR 173

Query: 125 -----DPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDR 179
                +P   S+ +   ++   N         VF  M    + P L    V++ +     
Sbjct: 174 NVYSCEPTFKSYNVVLEILVSGNCHKV--AANVFYDMLSRKIPPTLFTFGVVMKAFCAVN 231

Query: 180 LTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYN 239
             D    + + M + G V N  +Y  LIH+  K + V++  +LL EM       D  T+N
Sbjct: 232 EIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFN 291

Query: 240 TLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGA 299
            +I   CK     EA  + +RM   G +PD +TY  L++G C+ GR+  A+ LF  I   
Sbjct: 292 DVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRI--P 349

Query: 300 TPNHVTYTTLIDGYCRANDLEEA-LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDAN 358
            P  V + TLI G+     L++A   L +++ + G+ P V TYNS++    KEG +  A 
Sbjct: 350 KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLAL 409

Query: 359 RLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGF 418
            +L++M  K   P+  +   L++ +CK+G    A  V N M   GL  +   +  LI  F
Sbjct: 410 EVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAF 469

Query: 419 CKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDV 478
           CK   +  A E+   M   G  P   +++ L+ G C  +  +  L LL + +S G+  + 
Sbjct: 470 CKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANT 529

Query: 479 SVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDD 538
             Y  LI  F ++ ++  A++L N M   G   D + Y SL     RAGE      + + 
Sbjct: 530 VTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEK 589

Query: 539 MYR 541
           M R
Sbjct: 590 MLR 592



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 112/403 (27%), Positives = 190/403 (47%), Gaps = 9/403 (2%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAK-DRLTDMVWKV 187
           NS +   L+   +      + LQ+ ++M +   +P       ++  L K DR+ +   K+
Sbjct: 251 NSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAA-KM 309

Query: 188 YKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCK 247
             +M+  G   +   Y  L++  CK   VD  + L     ++  + ++  +NTLI  +  
Sbjct: 310 VNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLF----YRIPKPEIVIFNTLIHGFVT 365

Query: 248 KGMHYEALAV-QDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHV 304
            G   +A AV  D +   GI PD+ TYNSLI+G+ +EG +  A  +  D+  KG  PN  
Sbjct: 366 HGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVY 425

Query: 305 TYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM 364
           +YT L+DG+C+   ++EA  +   M+A G+ P  V +N ++   CKE RI +A  +  EM
Sbjct: 426 SYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREM 485

Query: 365 NEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEM 424
             K   PD  T N+LI+  C++ +   A+ +   M+  G++ +  TY  LI+ F +  E+
Sbjct: 486 PRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEI 545

Query: 425 DIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRAL 484
             A++L+  M+  G      +Y+ L+ G C     +    L ++ +  G          L
Sbjct: 546 KEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNIL 605

Query: 485 IRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
           I   C+   V+ A      M   G   D V + SL     RAG
Sbjct: 606 INGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAG 648



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 87/299 (29%), Positives = 155/299 (51%), Gaps = 2/299 (0%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N +  + LV  +  L    +   V ++M    L P+      L+++  K+       +++
Sbjct: 423 NVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIF 482

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
           ++M + G   +++ +N LI   C+  ++     LL +M  + V A+  TYNTLI  + ++
Sbjct: 483 REMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRR 542

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTY 306
           G   EA  + + M  +G   D +TYNSLI G CR G + +AR LF  +   G  P++++ 
Sbjct: 543 GEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISC 602

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
             LI+G CR+  +EEA+  ++ M  +G  P +VT+NS++  LC+ GRI D   +  ++  
Sbjct: 603 NILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQA 662

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMD 425
           + I PD VT NTL++  CK G    A  + +  +E G + +  T+  L+      + +D
Sbjct: 663 EGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLD 721



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 92/303 (30%), Positives = 159/303 (52%), Gaps = 2/303 (0%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           L+V   MR     P++++ T+L++   K    D  + V  +M   G+  N   +N LI A
Sbjct: 409 LEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISA 468

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
            CK   + +  ++  EM  K  + D++T+N+LI+  C+      AL +   M  EG+  +
Sbjct: 469 FCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVAN 528

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLRE 327
            VTYN+LI+ F R G ++EAR+L  ++  +G+  + +TY +LI G CRA ++++A  L E
Sbjct: 529 TVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFE 588

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
            M   G  P  ++ N ++  LC+ G + +A     EM  +   PD VT N+LIN  C+ G
Sbjct: 589 KMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAG 648

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
                + +  ++   G+  D  T+  L+   CK   +  A  LL   ++ GF P++ ++S
Sbjct: 649 RIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWS 708

Query: 448 WLV 450
            L+
Sbjct: 709 ILL 711



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 107/404 (26%), Positives = 185/404 (45%), Gaps = 8/404 (1%)

Query: 170 VLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEME-F 228
           VL+  L  +     + ++  +M   G+V    L+  ++    K+    +  +L+ EM   
Sbjct: 116 VLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNV 175

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
                   +YN ++ +      H  A  V   M    I P + T+  ++  FC    +  
Sbjct: 176 YSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDS 235

Query: 289 ARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILR 346
           A  L RD+   G  PN V Y TLI    + N + EAL+L E M   G  P   T+N ++ 
Sbjct: 236 ALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVIL 295

Query: 347 KLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLML 406
            LCK  RI +A +++N M  +  APD++T   L+N  CKIG   +A  +  R+ +  +++
Sbjct: 296 GLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVI 355

Query: 407 DQFTYKALIHGFCKAKEMDIAKELLFGMLDA-GFSPSYCSYSWLVDGYCNKNNEEALLKL 465
               +  LIHGF     +D AK +L  M+ + G  P  C+Y+ L+ GY  +      L++
Sbjct: 356 ----FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEV 411

Query: 466 LDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWR 525
           L +  ++G   +V  Y  L+  FCK  K+D A  + N M  +G+  ++V +  L  A+ +
Sbjct: 412 LHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCK 471

Query: 526 AGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFW 569
                   +I  +M R+     +  + S  +   + +EI    W
Sbjct: 472 EHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALW 515


>gi|449477018|ref|XP_004154904.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Cucumis sativus]
          Length = 567

 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 133/473 (28%), Positives = 233/473 (49%), Gaps = 8/473 (1%)

Query: 33  NIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNK 92
           N++ S ++  +  VL NL      P  S  FFK A S  P ++  + S+  ++HIL++ +
Sbjct: 91  NLSFSFSNELMDLVLRNLR---LNPDASLEFFKLA-SKQPKFRPDVSSYCKIVHILSRAR 146

Query: 93  HFKSAQNMLEKIAL--RDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGL 150
            +K  +  L ++ +  ++     +V + LV ++ +   +  V   ++  YA   MT+  L
Sbjct: 147 MYKEVRVYLNELVVLCKNNYIASAVWDELVSVYREFSFSPTVFDMILKVYAEKGMTKFAL 206

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
            VFD M     +P L +C  LL++L ++        VY++M+ LG++ +I  Y ++++A 
Sbjct: 207 CVFDNMGKCGRVPSLRSCNSLLSNLVQNGEAFKALLVYEQMIALGILPDIFSYTIMVNAY 266

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           CK   VD+    + EME      ++ TYN+LI  Y   G    A  V   M  +GI  + 
Sbjct: 267 CKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENS 326

Query: 271 VTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
            TY  LI G+C+ G+M +A +LF  +  K    +   Y  LI  YC A  +++ALR+R+ 
Sbjct: 327 RTYTLLIKGYCKRGQMEQAEKLFGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDA 386

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M   G+    V  NS++   CK G +  A  +L  M +  + PD+   NTL++ +CK  D
Sbjct: 387 MLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQED 446

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
              A K+ + M   G+     TY  L+        ++ A  +   M   G +P+  +Y  
Sbjct: 447 FIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCT 506

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
           L+D +      +  + +  + +S+G    +++Y  +I  FCK EK+  AQ +F
Sbjct: 507 LLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIF 559



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 89/332 (26%), Positives = 159/332 (47%), Gaps = 14/332 (4%)

Query: 228 FKDVRADLFTYNTLIALYCKKGMHYEALAVQDRM---ERE-GISPDIVTYNSLIHGFCRE 283
           +K+VR  L   N L+ L CK   +Y A AV D +    RE   SP +  ++ ++  +  +
Sbjct: 148 YKEVRVYL---NELVVL-CKN--NYIASAVWDELVSVYREFSFSPTV--FDMILKVYAEK 199

Query: 284 GRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTY 341
           G  + A  +F ++   G  P+  +  +L+    +  +  +AL + E M A G+ P + +Y
Sbjct: 200 GMTKFALCVFDNMGKCGRVPSLRSCNSLLSNLVQNGEAFKALLVYEQMIALGILPDIFSY 259

Query: 342 NSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLE 401
             ++   CKEGR+ +A   + EM      P+ VT N+LI+ Y  +GD   A KV   M E
Sbjct: 260 TIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSE 319

Query: 402 AGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEA 461
            G+  +  TY  LI G+CK  +M+ A++L   M++         Y  L+  YC     + 
Sbjct: 320 KGIPENSRTYTLLIKGYCKRGQMEQAEKLFGCMMEKNLFVDEHVYGVLIHAYCTAGRVDD 379

Query: 462 LLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAY 521
            L++ D  +  GL ++  +  +LI  +CK   V+ A  +   M+   +  DS  Y +L  
Sbjct: 380 ALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLD 439

Query: 522 AYWRAGEPKACSDILDDMYRRRLMITLKIYRS 553
            + +  +      + D+M+ + +  T+  Y +
Sbjct: 440 GFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNT 471



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 67/293 (22%), Positives = 128/293 (43%), Gaps = 14/293 (4%)

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLRE 327
           PD+ +Y  ++H   R    +E R               Y   +   C+ N +  A+    
Sbjct: 130 PDVSSYCKIVHILSRARMYKEVR--------------VYLNELVVLCKNNYIASAVWDEL 175

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
           V   +        ++ IL+   ++G  + A  + + M +    P   +CN+L++   + G
Sbjct: 176 VSVYREFSFSPTVFDMILKVYAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSNLVQNG 235

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
           +   A+ V  +M+  G++ D F+Y  +++ +CK   +D A   +  M  +   P+  +Y+
Sbjct: 236 EAFKALLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYN 295

Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGN 507
            L+DGY +  +     K+L     +G+  +   Y  LI+ +CK+ +++ A++LF  M   
Sbjct: 296 SLIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLFGCMMEK 355

Query: 508 GILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAK 560
            +  D  +Y  L +AY  AG       I D M +  L +   I  S    Y K
Sbjct: 356 NLFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCK 408



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 55/252 (21%), Positives = 104/252 (41%), Gaps = 6/252 (2%)

Query: 318 DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDA--NRLLNEMNEKKIAPDNVT 375
           D+    ++  +++   +Y  V  Y + L  LCK   I  A  + L++   E   +P    
Sbjct: 131 DVSSYCKIVHILSRARMYKEVRVYLNELVVLCKNNYIASAVWDELVSVYREFSFSP--TV 188

Query: 376 CNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGML 435
            + ++  Y + G T  A+ V + M + G +    +  +L+    +  E   A  +   M+
Sbjct: 189 FDMILKVYAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSNLVQNGEAFKALLVYEQMI 248

Query: 436 DAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLC-VDVSVYRALIRRFCKKEKV 494
             G  P   SY+ +V+ YC +   +     + E + R  C  +V  Y +LI  +     V
Sbjct: 249 ALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKE-MERSCCEPNVVTYNSLIDGYVSLGDV 307

Query: 495 DYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSF 554
             A+++  LM   GI  +S  YT L   Y + G+ +    +   M  + L +   +Y   
Sbjct: 308 CGAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLFGCMMEKNLFVDEHVYGVL 367

Query: 555 SASYAKDNEILD 566
             +Y     + D
Sbjct: 368 IHAYCTAGRVDD 379


>gi|414591138|tpg|DAA41709.1| TPA: hypothetical protein ZEAMMB73_028111 [Zea mays]
          Length = 583

 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 116/374 (31%), Positives = 189/374 (50%), Gaps = 2/374 (0%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D  ++ D M  H +  +      LL+   + +    V ++ + M   G+ A +  Y +L+
Sbjct: 195 DARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMENEGIEATVGTYTILV 254

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
            +   + D+ KVE L  EM+  +V  D++ Y  +I  YC+ G    A  V D     G+ 
Sbjct: 255 DSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRRAAKVLDECVGNGVE 314

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDIKGATP--NHVTYTTLIDGYCRANDLEEALRL 325
           P+  TY  LI+GFC+ G+M  A  L  D++G     N + + T+IDGYCR   +++AL++
Sbjct: 315 PNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKI 374

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
           +  M   GV   + TYN++   LC+  R+ +A  LL+ M E  + P+ VT  TLI+ +CK
Sbjct: 375 KAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCK 434

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            GD   A ++   M E G      TY  +I G+ K   +  A+     M   GF P   +
Sbjct: 435 DGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIREAERFRKEMEKKGFVPDVYT 494

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+ LV G+C     +  LKL +E   RG   +V  Y ALI    K+ + + A +L++ M 
Sbjct: 495 YASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDML 554

Query: 506 GNGILGDSVIYTSL 519
             G++ D  +Y++L
Sbjct: 555 KAGLIPDDSLYSAL 568



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 111/311 (35%), Positives = 165/311 (53%), Gaps = 2/311 (0%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           +F++M+ +N++  ++  T ++N+  +        KV  + V  GV  N   Y VLI+  C
Sbjct: 269 LFNEMKANNVVGDVYLYTAVINAYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLINGFC 328

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           K   ++  E LL +M+ + V  +   +NT+I  YC+KGM  +AL ++  ME+ G+  DI 
Sbjct: 329 KIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIY 388

Query: 272 TYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           TYN+L  G CR  R+ EA+ L   +   G  PN+VTYTTLI  +C+  D+ EA RL   M
Sbjct: 389 TYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREM 448

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
           A KG  P VVTYN ++    K+G IR+A R   EM +K   PD  T  +L++ +C  G  
Sbjct: 449 AEKGATPSVVTYNVMIDGYTKKGSIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKV 508

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
             A+K+   M + G   +   Y ALI G  K    + A +L   ML AG  P    YS L
Sbjct: 509 DVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSAL 568

Query: 450 VDGYCNKNNEE 460
           V      N ++
Sbjct: 569 VGSLHTDNRKD 579



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 110/398 (27%), Positives = 189/398 (47%), Gaps = 2/398 (0%)

Query: 167 ACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEM 226
           A +V+++ L K    D   ++   M + GV  N   YN L+    +  D  +V+++L  M
Sbjct: 179 AASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIM 238

Query: 227 EFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRM 286
           E + + A + TY  L+          +  A+ + M+   +  D+  Y ++I+ +CR G M
Sbjct: 239 ENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNM 298

Query: 287 REARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSI 344
           R A ++  +    G  PN  TY  LI+G+C+   +E A  L   M  +GV    + +N++
Sbjct: 299 RRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTM 358

Query: 345 LRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGL 404
           +   C++G + DA ++   M +  +  D  T NTL    C++     A  + + M+E G+
Sbjct: 359 IDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGV 418

Query: 405 MLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLK 464
           + +  TY  LI   CK  +M  A+ L   M + G +PS  +Y+ ++DGY  K +     +
Sbjct: 419 VPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIREAER 478

Query: 465 LLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYW 524
              E   +G   DV  Y +L+   C   KVD A +LF  M+  G   + V YT+L     
Sbjct: 479 FRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLA 538

Query: 525 RAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDN 562
           + G  +A   + DDM +  L+    +Y +   S   DN
Sbjct: 539 KEGRSEAAFQLYDDMLKAGLIPDDSLYSALVGSLHTDN 576



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 95/290 (32%), Positives = 148/290 (51%), Gaps = 2/290 (0%)

Query: 128 GNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKV 187
           G+ ++ + ++  Y      +   +V D+   + + P+     VL+N   K    +    +
Sbjct: 280 GDVYLYTAVINAYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEML 339

Query: 188 YKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCK 247
              M   GV  N  ++N +I   C+   VD   K+   ME   V  D++TYNTL    C+
Sbjct: 340 LADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCR 399

Query: 248 KGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVT 305
                EA  +   M   G+ P+ VTY +LI   C++G M EARRLFR++  KGATP+ VT
Sbjct: 400 VNRLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVT 459

Query: 306 YTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMN 365
           Y  +IDGY +   + EA R R+ M  KG  P V TY S++   C  G++  A +L  EM 
Sbjct: 460 YNVMIDGYTKKGSIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMK 519

Query: 366 EKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALI 415
           ++   P+ V    LI+   K G + +A ++ + ML+AGL+ D   Y AL+
Sbjct: 520 QRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALV 569



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 83/301 (27%), Positives = 143/301 (47%), Gaps = 4/301 (1%)

Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEAL 323
           +SP  +  + ++ G C+ GR+ +ARRL  D+   G + N + Y +L+D Y R  D     
Sbjct: 175 VSP--LAASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQ 232

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
            + E+M  +G+   V TY  ++  L     I     L NEM    +  D      +INAY
Sbjct: 233 EILEIMENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAY 292

Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY 443
           C+ G+   A KV +  +  G+  ++ TY  LI+GFCK  +M+ A+ LL  M   G   + 
Sbjct: 293 CRAGNMRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQ 352

Query: 444 CSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNL 503
             ++ ++DGYC K   +  LK+       G+ +D+  Y  L    C+  ++D A+ L ++
Sbjct: 353 IIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHI 412

Query: 504 MQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNE 563
           M   G++ + V YT+L   + + G+      +  +M  +    ++  Y      Y K   
Sbjct: 413 MIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGS 472

Query: 564 I 564
           I
Sbjct: 473 I 473



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 107/227 (47%), Gaps = 2/227 (0%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N  + + ++  Y    M  D L++   M    +   ++    L   L +    D    + 
Sbjct: 351 NQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLL 410

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
             M+++GVV N   Y  LI   CK  D+ +  +L  EM  K     + TYN +I  Y KK
Sbjct: 411 HIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKK 470

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTY 306
           G   EA   +  ME++G  PD+ TY SL+HG C  G++  A +LF ++K  G  PN V Y
Sbjct: 471 GSIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAY 530

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGR 353
           T LI G  +    E A +L + M   G+ P    Y++++  L  + R
Sbjct: 531 TALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALVGSLHTDNR 577


>gi|6692112|gb|AAF24577.1|AC007764_19 F22C12.14 [Arabidopsis thaliana]
          Length = 661

 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 115/407 (28%), Positives = 204/407 (50%), Gaps = 4/407 (0%)

Query: 132 VLSWLVIFYANLKM--TQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYK 189
           V+++  I     KM  T+  L +  +M   ++ P +   + +++ L KD        ++ 
Sbjct: 256 VVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFS 315

Query: 190 KMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKG 249
           +M++ G+  N+  YN +I   C        ++LL +M  +++  D+ T+N LI+   K+G
Sbjct: 316 EMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEG 375

Query: 250 MHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTL 309
             +EA  + D M    I PD VTYNS+I+GFC+  R  +A+ +F  +  A+P+ VT+ T+
Sbjct: 376 KLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM--ASPDVVTFNTI 433

Query: 310 IDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI 369
           ID YCRA  ++E ++L   ++ +G+     TYN+++   C+   +  A  L  EM    +
Sbjct: 434 IDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGV 493

Query: 370 APDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKE 429
            PD +TCN L+  +C+      A+++   +  + + LD   Y  +IHG CK  ++D A +
Sbjct: 494 CPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWD 553

Query: 430 LLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFC 489
           L   +   G  P   +Y+ ++ G+C K+       L  +    G   D S Y  LIR   
Sbjct: 554 LFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCL 613

Query: 490 KKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDIL 536
           K  ++D +  L + M+ NG  GD+     +A         K+ SD+L
Sbjct: 614 KAGEIDKSIELISEMRSNGFSGDAFTIKMVADLITDGRLDKSFSDML 660



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 123/432 (28%), Positives = 199/432 (46%), Gaps = 42/432 (9%)

Query: 145 MTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYN 204
           M + G  +FDQM    L P +     L+N L  +        +  KMV  G+  ++  Y 
Sbjct: 202 MVETG-SLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYG 260

Query: 205 VLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMERE 264
            +++  CK  D      LL +ME   ++ D+  Y+ +I   CK G H +A  +   M  +
Sbjct: 261 TIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEK 320

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEA 322
           GI+P++ TYN +I GFC  GR  +A+RL RD+  +   P+ +T+  LI    +   L EA
Sbjct: 321 GIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEA 380

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            +L + M  + ++P  VTYNS++   CK  R  DA  + + M     +PD VT NT+I+ 
Sbjct: 381 EKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDV 436

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           YC+       M++   +   GL+ +  TY  LIHGFC+   ++ A++L   M+  G  P 
Sbjct: 437 YCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPD 496

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLD--------------EFVSRGLC------------- 475
             + + L+ G+C     E  L+L +                +  G+C             
Sbjct: 497 TITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFC 556

Query: 476 --------VDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
                    DV  Y  +I  FC K  +  A  LF+ M+ NG   D+  Y +L     +AG
Sbjct: 557 SLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAG 616

Query: 528 EPKACSDILDDM 539
           E     +++ +M
Sbjct: 617 EIDKSIELISEM 628



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 107/363 (29%), Positives = 176/363 (48%), Gaps = 19/363 (5%)

Query: 225 EMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREG 284
           +ME + +  +++++N LI  +C       +L+   ++ + G  PD+VT+N+L+HG C E 
Sbjct: 131 KMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLED 190

Query: 285 RMREARRLFRDIK------------GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAK 332
           R+ EA  LF  +             G TP  +T+ TLI+G C    + EA  L   M  K
Sbjct: 191 RISEALALFGYMVETGSLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGK 250

Query: 333 GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
           G++  VVTY +I+  +CK G  + A  LL++M E  I PD V  + +I+  CK G  + A
Sbjct: 251 GLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDA 310

Query: 393 MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
             + + MLE G+  + FTY  +I GFC       A+ LL  M++   +P   +++ L+  
Sbjct: 311 QYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISA 370

Query: 453 YCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGD 512
              +       KL DE + R +  D   Y ++I  FCK  + D A+ +F+LM       D
Sbjct: 371 SVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASP----D 426

Query: 513 SVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKD---NEILDLFW 569
            V + ++   Y RA        +L ++ RR L+     Y +    + +    N   DLF 
Sbjct: 427 VVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQ 486

Query: 570 SHV 572
             +
Sbjct: 487 EMI 489



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/277 (21%), Positives = 128/277 (46%), Gaps = 24/277 (8%)

Query: 80  SHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIF 139
           ++ +MI+   K+  F  A++M       D +++P V+                 + ++  
Sbjct: 398 TYNSMIYGFCKHNRFDDAKHMF------DLMASPDVV---------------TFNTIIDV 436

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
           Y   K   +G+Q+  ++    L+ +      L++   +    +    ++++M+  GV  +
Sbjct: 437 YCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPD 496

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
               N+L++  C++  +++  +L   ++   +  D   YN +I   CK     EA  +  
Sbjct: 497 TITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFC 556

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRAN 317
            +   G+ PD+ TYN +I GFC +  + +A  LF  +K  G  P++ TY TLI G  +A 
Sbjct: 557 SLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAG 616

Query: 318 DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRI 354
           ++++++ L   M + G + G      ++  L  +GR+
Sbjct: 617 EIDKSIELISEMRSNG-FSGDAFTIKMVADLITDGRL 652



 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 50/213 (23%), Positives = 95/213 (44%), Gaps = 14/213 (6%)

Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT 378
           L++A+   + M     +   V  N ++    +  R   A  L  +M  ++I  +  + N 
Sbjct: 87  LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146

Query: 379 LINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL-LFG---- 433
           LI  +C     + ++    ++ + G   D  T+  L+HG C   E  I++ L LFG    
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLC--LEDRISEALALFGYMVE 204

Query: 434 -------MLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
                  M++ G +P   +++ L++G C +        L+++ V +GL +DV  Y  ++ 
Sbjct: 205 TGSLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVN 264

Query: 487 RFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
             CK      A  L + M+   I  D VIY+++
Sbjct: 265 GMCKMGDTKSALNLLSKMEETHIKPDVVIYSAI 297


>gi|18407969|ref|NP_564822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806279|sp|Q9SH60.2|PP103_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64100
 gi|332196071|gb|AEE34192.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 666

 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 138/554 (24%), Positives = 254/554 (45%), Gaps = 43/554 (7%)

Query: 24  GHWAKLLNPNIASSL-TSTAIHKVLLNLYN------C-CHIPSLSCAFFKWAESAVPNYK 75
           G + ++  P++A SL     I ++ LN+Y+      C C    LS +   + +     ++
Sbjct: 114 GVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQ 173

Query: 76  HSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDP--------- 126
             + +  T++H L        A  +   +    FL   ++ + +V+I   P         
Sbjct: 174 PDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLI 233

Query: 127 -----DG-----------------NSHVLSWLVIFYANLKM--TQDGLQVFDQMRVHNLM 162
                +G                 +  V+++  I     KM  T+  L +  +M   ++ 
Sbjct: 234 NGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIK 293

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
           P +   + +++ L KD        ++ +M++ G+  N+  YN +I   C        ++L
Sbjct: 294 PDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRL 353

Query: 223 LCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR 282
           L +M  +++  D+ T+N LI+   K+G  +EA  + D M    I PD VTYNS+I+GFC+
Sbjct: 354 LRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCK 413

Query: 283 EGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYN 342
             R  +A+ +F  +  A+P+ VT+ T+ID YCRA  ++E ++L   ++ +G+     TYN
Sbjct: 414 HNRFDDAKHMFDLM--ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYN 471

Query: 343 SILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEA 402
           +++   C+   +  A  L  EM    + PD +TCN L+  +C+      A+++   +  +
Sbjct: 472 TLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMS 531

Query: 403 GLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEAL 462
            + LD   Y  +IHG CK  ++D A +L   +   G  P   +Y+ ++ G+C K+     
Sbjct: 532 KIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDA 591

Query: 463 LKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYA 522
             L  +    G   D S Y  LIR   K  ++D +  L + M+ NG  GD+     +A  
Sbjct: 592 NVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVADL 651

Query: 523 YWRAGEPKACSDIL 536
                  K+ SD+L
Sbjct: 652 ITDGRLDKSFSDML 665



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 121/429 (28%), Positives = 198/429 (46%), Gaps = 41/429 (9%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           + + +FDQM    L P +     L+N L  +        +  KMV  G+  ++  Y  ++
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           +  CK  D      LL +ME   ++ D+  Y+ +I   CK G H +A  +   M  +GI+
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 328

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
           P++ TYN +I GFC  GR  +A+RL RD+  +   P+ +T+  LI    +   L EA +L
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKL 388

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
            + M  + ++P  VTYNS++   CK  R  DA  + + M     +PD VT NT+I+ YC+
Sbjct: 389 CDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCR 444

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
                  M++   +   GL+ +  TY  LIHGFC+   ++ A++L   M+  G  P   +
Sbjct: 445 AKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTIT 504

Query: 446 YSWLVDGYCNKNNEEALLKLLD--------------EFVSRGLC---------------- 475
            + L+ G+C     E  L+L +                +  G+C                
Sbjct: 505 CNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLP 564

Query: 476 -----VDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPK 530
                 DV  Y  +I  FC K  +  A  LF+ M+ NG   D+  Y +L     +AGE  
Sbjct: 565 IHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEID 624

Query: 531 ACSDILDDM 539
              +++ +M
Sbjct: 625 KSIELISEM 633



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 107/368 (29%), Positives = 176/368 (47%), Gaps = 24/368 (6%)

Query: 225 EMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREG 284
           +ME + +  +++++N LI  +C       +L+   ++ + G  PD+VT+N+L+HG C E 
Sbjct: 131 KMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLED 190

Query: 285 RMREARRLFRDIK-----------------GATPNHVTYTTLIDGYCRANDLEEALRLRE 327
           R+ EA  LF  +                  G TP  +T+ TLI+G C    + EA  L  
Sbjct: 191 RISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVN 250

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
            M  KG++  VVTY +I+  +CK G  + A  LL++M E  I PD V  + +I+  CK G
Sbjct: 251 KMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDG 310

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
             + A  + + MLE G+  + FTY  +I GFC       A+ LL  M++   +P   +++
Sbjct: 311 HHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFN 370

Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGN 507
            L+     +       KL DE + R +  D   Y ++I  FCK  + D A+ +F+LM   
Sbjct: 371 ALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASP 430

Query: 508 GILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKD---NEI 564
               D V + ++   Y RA        +L ++ RR L+     Y +    + +    N  
Sbjct: 431 ----DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAA 486

Query: 565 LDLFWSHV 572
            DLF   +
Sbjct: 487 QDLFQEMI 494



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/216 (21%), Positives = 91/216 (42%), Gaps = 15/216 (6%)

Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT 378
           L++A+   + M     +   V  N ++    +  R   A  L  +M  ++I  +  + N 
Sbjct: 87  LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146

Query: 379 LINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAG 438
           LI  +C     + ++    ++ + G   D  T+  L+HG C    +  A  L   M++ G
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206

Query: 439 F---------------SPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRA 483
           F               +P   +++ L++G C +        L+++ V +GL +DV  Y  
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266

Query: 484 LIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
           ++   CK      A  L + M+   I  D VIY+++
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAI 302


>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
 gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 621

 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 123/417 (29%), Positives = 201/417 (48%), Gaps = 6/417 (1%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           S +  ++K+  +PD  +   S L+          + L++ D+M      P L     L+N
Sbjct: 128 SAMGKIIKLGYEPD--TVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVN 185

Query: 174 SLA-KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVR 232
            L    +++D V  +  +MV+ G   N   Y  ++   CKS       +LL +ME + ++
Sbjct: 186 GLCLNGKVSDAVL-LIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIK 244

Query: 233 ADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRL 292
            D   Y+ +I   CK G    A  + + ME +G   DI+ Y +LI GFC  GR  +  +L
Sbjct: 245 LDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKL 304

Query: 293 FRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
            RD+  +  TP+ V ++ LID + +   L EA  L + M  +G+ P  VTY S++   CK
Sbjct: 305 LRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCK 364

Query: 351 EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
           E ++  AN +L+ M  K   P+  T N LIN YCK       +++  +M   G++ D  T
Sbjct: 365 ENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVT 424

Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFV 470
           Y  LI GFC+  ++++AKEL   M+     P   SY  L+DG C+    E  L++ ++  
Sbjct: 425 YNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIE 484

Query: 471 SRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
              + +D+ +Y  +I   C   KVD A  LF  +   G+  D   Y  +     + G
Sbjct: 485 KSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKG 541



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 130/491 (26%), Positives = 228/491 (46%), Gaps = 19/491 (3%)

Query: 53  CCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLST 112
           CC    LS AF    +     Y+    +  T+I+ L        A  +++++       T
Sbjct: 117 CCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPT 176

Query: 113 PSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLL 172
              LNALV        N   L+  V          D + + D+M      P+      +L
Sbjct: 177 LITLNALV--------NGLCLNGKV---------SDAVLLIDRMVETGFQPNEVTYGPVL 219

Query: 173 NSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVR 232
             + K   T +  ++ +KM +  +  +   Y+++I   CK   +D    L  EME K  +
Sbjct: 220 KVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFK 279

Query: 233 ADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRL 292
           AD+  Y TLI  +C  G   +   +   M +  I+PD+V +++LI  F +EG++REA  L
Sbjct: 280 ADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEEL 339

Query: 293 FRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
            +++  +G +P+ VTYT+LIDG+C+ N L++A  + ++M +KG  P + T+N ++   CK
Sbjct: 340 HKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCK 399

Query: 351 EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
              I D   L  +M+ + +  D VT NTLI  +C++G    A ++   M+   +  D  +
Sbjct: 400 ANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVS 459

Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFV 470
           YK L+ G C   E + A E+   +  +        Y+ ++ G CN +  +    L     
Sbjct: 460 YKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLP 519

Query: 471 SRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPK 530
            +G+  DV  Y  +I   CKK  +  A  LF  M+ +G   +   Y  L  A+   G+  
Sbjct: 520 LKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDAT 579

Query: 531 ACSDILDDMYR 541
             + +++++ R
Sbjct: 580 KSAKLIEEIKR 590



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 126/463 (27%), Positives = 217/463 (46%), Gaps = 40/463 (8%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D + +F +M      P L   + L + +A+ +  D+V  + K+M   G+  N++  +++I
Sbjct: 55  DAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMI 114

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           + CC+   +      + ++       D  T++TLI   C +G   EAL + DRM   G  
Sbjct: 115 NCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHK 174

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTY------------------- 306
           P ++T N+L++G C  G++ +A  L   +   G  PN VTY                   
Sbjct: 175 PTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMEL 234

Query: 307 ----------------TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
                           + +IDG C+   L+ A  L   M  KG    ++ Y +++R  C 
Sbjct: 235 LRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCY 294

Query: 351 EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
            GR  D  +LL +M ++KI PD V  + LI+ + K G    A ++   M++ G+  D  T
Sbjct: 295 AGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVT 354

Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFV 470
           Y +LI GFCK  ++D A  +L  M+  G  P+  +++ L++GYC  N  +  L+L  +  
Sbjct: 355 YTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMS 414

Query: 471 SRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPK 530
            RG+  D   Y  LI+ FC+  K++ A+ LF  M    +  D V Y  L       GEP+
Sbjct: 415 LRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPE 474

Query: 531 ACSDILDDMYRRRLMITLKIYRSF---SASYAKDNEILDLFWS 570
              +I + + + ++ + + IY        + +K ++  DLF S
Sbjct: 475 KALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCS 517



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 110/376 (29%), Positives = 179/376 (47%), Gaps = 14/376 (3%)

Query: 217 DKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSL 276
           D    L  EM     R  L  ++ L ++  +   +   L +  +ME +GI+ ++ T + +
Sbjct: 54  DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113

Query: 277 IHGFCREGRMREA-RRLFRDIK-GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGV 334
           I+  CR  ++  A   + + IK G  P+ VT++TLI+G C    + EAL L + M   G 
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173

Query: 335 YPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMK 394
            P ++T N+++  LC  G++ DA  L++ M E    P+ VT   ++   CK G TA AM+
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233

Query: 395 VKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYC 454
           +  +M E  + LD   Y  +I G CK   +D A  L   M   GF      Y+ L+ G+C
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC 293

Query: 455 NKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSV 514
                +   KLL + + R +  DV  + ALI  F K+ K+  A+ L   M   GI  D+V
Sbjct: 294 YAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTV 353

Query: 515 IYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVD 574
            YTSL   + +  +    + +LD M  +     ++ +      Y K N         ++D
Sbjct: 354 TYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKAN---------LID 404

Query: 575 RGLMSKHIFKEMQLRN 590
            GL    +F++M LR 
Sbjct: 405 DGL---ELFRKMSLRG 417



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 97/388 (25%), Positives = 177/388 (45%), Gaps = 19/388 (4%)

Query: 81  HWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFY 140
           +  +I  L K+    +A N+  ++ ++ F +   +   L++      G  +   W     
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIR------GFCYAGRW----- 298

Query: 141 ANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANI 200
                  DG ++   M    + P + A + L++   K+       +++K+M+Q G+  + 
Sbjct: 299 ------DDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDT 352

Query: 201 HLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDR 260
             Y  LI   CK + +DK   +L  M  K    ++ T+N LI  YCK  +  + L +  +
Sbjct: 353 VTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRK 412

Query: 261 MEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRAND 318
           M   G+  D VTYN+LI GFC  G++  A+ LF+++  +   P+ V+Y  L+DG C   +
Sbjct: 413 MSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGE 472

Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT 378
            E+AL + E +    +   +  YN I+  +C   ++ DA  L   +  K + PD  T N 
Sbjct: 473 PEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNI 532

Query: 379 LINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAG 438
           +I   CK G  + A  +  +M E G   +  TY  LI       +   + +L+  +   G
Sbjct: 533 MIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCG 592

Query: 439 FSPSYCSYSWLVDGYCNKNNEEALLKLL 466
           FS    +   +VD   +   +++ L +L
Sbjct: 593 FSVDASTVKMVVDMLSDGRLKKSFLDML 620



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 51/254 (20%), Positives = 103/254 (40%), Gaps = 12/254 (4%)

Query: 337 GVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVK 396
           G V+Y   LR    + +  DA  L  EM   +  P  +  + L +   +       + + 
Sbjct: 36  GKVSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLC 95

Query: 397 NRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNK 456
            +M   G+  + +T   +I+  C+ +++ +A   +  ++  G+ P   ++S L++G C +
Sbjct: 96  KQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLE 155

Query: 457 NNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIY 516
                 L+L+D  V  G    +    AL+   C   KV  A  L + M   G   + V Y
Sbjct: 156 GRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTY 215

Query: 517 TSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRG 576
             +     ++G+     ++L  M  R++ +    Y        KD  + + F        
Sbjct: 216 GPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAF-------- 267

Query: 577 LMSKHIFKEMQLRN 590
               ++F EM+++ 
Sbjct: 268 ----NLFNEMEIKG 277


>gi|224144893|ref|XP_002325452.1| predicted protein [Populus trichocarpa]
 gi|222862327|gb|EEE99833.1| predicted protein [Populus trichocarpa]
          Length = 864

 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 118/394 (29%), Positives = 197/394 (50%), Gaps = 13/394 (3%)

Query: 156 MRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSD 215
           +R H+++P L     L+       L   VW +Y +M+  GV+ N+  +N+L+HA CK   
Sbjct: 2   IRTHHIVPTLPLWNRLIYQFNATGLVSQVWDLYSEMLSCGVLPNVFTHNILVHAWCKMGH 61

Query: 216 VDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNS 275
           +     L+  +   D+  D  TYNT I  +C++G+  +       M ++    D  T N 
Sbjct: 62  LSLALDLIRNV---DIDVDTVTYNTAIWGFCQQGLANQGFGFLSIMVKKDTFFDSFTCNI 118

Query: 276 LIHGFCREGRMREARRLF-------RDIKGAT---PNHVTYTTLIDGYCRANDLEEALRL 325
           L+ GFCR G ++    +         D  G T   PN VTYTTLI  YC+ + L EAL L
Sbjct: 119 LVKGFCRIGSVKYGEWVMDNLIDDMNDDDGTTNLEPNLVTYTTLISAYCKQHGLSEALSL 178

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
            E M + G  P VVTY+SI+  LCK G + +A  LL EM++  + P++V    L+++  K
Sbjct: 179 YEEMISDGFLPDVVTYSSIINGLCKRGMLTEAKALLREMDKMGVNPNHVVYAILVDSLFK 238

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            G    +   +++M+  G+  D      LI G  KA + D A+ +   +      P+  +
Sbjct: 239 AGSAWESFIYQSQMIVCGVSFDLVVCTTLIDGLFKAGKSDEAEAMFCTLAKLNCIPNNIT 298

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+ ++DGYC   + +    LL +   + +  +V  Y ++I  + KK  +D A R+   M 
Sbjct: 299 YTAMIDGYCKLGDMDGAESLLRDMEKKQVVPNVVTYSSIINGYTKKGMLDVAVRIMKKML 358

Query: 506 GNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
              I+ ++ IY +L   + +AG+  A  D+ ++M
Sbjct: 359 DQNIMPNAYIYATLIDGHLKAGKQDAAVDLYNEM 392



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 114/431 (26%), Positives = 204/431 (47%), Gaps = 36/431 (8%)

Query: 160 NLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKV 219
           NL P+L   T L+++  K         +Y++M+  G + ++  Y+ +I+  CK   + + 
Sbjct: 151 NLEPNLVTYTTLISAYCKQHGLSEALSLYEEMISDGFLPDVVTYSSIINGLCKRGMLTEA 210

Query: 220 EKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHG 279
           + LL EM+   V  +   Y  L+    K G  +E+   Q +M   G+S D+V   +LI G
Sbjct: 211 KALLREMDKMGVNPNHVVYAILVDSLFKAGSAWESFIYQSQMIVCGVSFDLVVCTTLIDG 270

Query: 280 FCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPG 337
             + G+  EA  +F  +      PN++TYT +IDGYC+  D++ A  L   M  K V P 
Sbjct: 271 LFKAGKSDEAEAMFCTLAKLNCIPNNITYTAMIDGYCKLGDMDGAESLLRDMEKKQVVPN 330

Query: 338 VVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKN 397
           VVTY+SI+    K+G +  A R++ +M ++ I P+     TLI+ + K G   +A+ + N
Sbjct: 331 VVTYSSIINGYTKKGMLDVAVRIMKKMLDQNIMPNAYIYATLIDGHLKAGKQDAAVDLYN 390

Query: 398 RMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKN 457
            M   GL  + F   A I+   + ++M+ A+ L   M+  G      +Y+ L+DG+    
Sbjct: 391 EMKLNGLEENSFIVDAFINNLKRGRKMEEAEGLCKYMMSKGLLLDRVNYTSLMDGFFKTG 450

Query: 458 NEEALLKLLDEFVSRGLCVDV----------------------------------SVYRA 483
            E A   + ++    G+  DV                                  + Y  
Sbjct: 451 RESAAFTMAEKMAETGIKFDVVAYNVLINGLLRLGKYDAESVYSGIRELGLAPDRATYNT 510

Query: 484 LIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRR 543
           +I  +CK+ K++ A +L+N M+G+ ++ +S+    L     +AGE +   D+L++M    
Sbjct: 511 MINAYCKQGKLENAIKLWNEMKGHSVMPNSITCNILVGGLSKAGETERAIDVLNEMLLWG 570

Query: 544 LMITLKIYRSF 554
           +   + I+R+ 
Sbjct: 571 ICPNVTIHRAL 581



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 102/346 (29%), Positives = 175/346 (50%), Gaps = 10/346 (2%)

Query: 204 NVLIHACCKSSDVDKVE----KLLCEMEFKD----VRADLFTYNTLIALYCKKGMHYEAL 255
           N+L+   C+   V   E     L+ +M   D    +  +L TY TLI+ YCK+    EAL
Sbjct: 117 NILVKGFCRIGSVKYGEWVMDNLIDDMNDDDGTTNLEPNLVTYTTLISAYCKQHGLSEAL 176

Query: 256 AVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGY 313
           ++ + M  +G  PD+VTY+S+I+G C+ G + EA+ L R++   G  PNHV Y  L+D  
Sbjct: 177 SLYEEMISDGFLPDVVTYSSIINGLCKRGMLTEAKALLREMDKMGVNPNHVVYAILVDSL 236

Query: 314 CRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDN 373
            +A    E+   +  M   GV   +V   +++  L K G+  +A  +   + +    P+N
Sbjct: 237 FKAGSAWESFIYQSQMIVCGVSFDLVVCTTLIDGLFKAGKSDEAEAMFCTLAKLNCIPNN 296

Query: 374 VTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFG 433
           +T   +I+ YCK+GD   A  +   M +  ++ +  TY ++I+G+ K   +D+A  ++  
Sbjct: 297 ITYTAMIDGYCKLGDMDGAESLLRDMEKKQVVPNVVTYSSIINGYTKKGMLDVAVRIMKK 356

Query: 434 MLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEK 493
           MLD    P+   Y+ L+DG+     ++A + L +E    GL  +  +  A I    +  K
Sbjct: 357 MLDQNIMPNAYIYATLIDGHLKAGKQDAAVDLYNEMKLNGLEENSFIVDAFINNLKRGRK 416

Query: 494 VDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
           ++ A+ L   M   G+L D V YTSL   +++ G   A   + + M
Sbjct: 417 MEEAEGLCKYMMSKGLLLDRVNYTSLMDGFFKTGRESAAFTMAEKM 462



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 115/409 (28%), Positives = 186/409 (45%), Gaps = 38/409 (9%)

Query: 155 QMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSS 214
           QM V  +   L  CT L++ L K   +D    ++  + +L  + N   Y  +I   CK  
Sbjct: 251 QMIVCGVSFDLVVCTTLIDGLFKAGKSDEAEAMFCTLAKLNCIPNNITYTAMIDGYCKLG 310

Query: 215 DVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYN 274
           D+D  E LL +ME K V  ++ TY+++I  Y KKGM   A+ +  +M  + I P+   Y 
Sbjct: 311 DMDGAESLLRDMEKKQVVPNVVTYSSIINGYTKKGMLDVAVRIMKKMLDQNIMPNAYIYA 370

Query: 275 SLIHGFCREGRMREARRLFRDI-------------------------------------K 297
           +LI G  + G+   A  L+ ++                                     K
Sbjct: 371 TLIDGHLKAGKQDAAVDLYNEMKLNGLEENSFIVDAFINNLKRGRKMEEAEGLCKYMMSK 430

Query: 298 GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDA 357
           G   + V YT+L+DG+ +      A  + E MA  G+   VV YN ++  L + G+  DA
Sbjct: 431 GLLLDRVNYTSLMDGFFKTGRESAAFTMAEKMAETGIKFDVVAYNVLINGLLRLGKY-DA 489

Query: 358 NRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHG 417
             + + + E  +APD  T NT+INAYCK G   +A+K+ N M    +M +  T   L+ G
Sbjct: 490 ESVYSGIRELGLAPDRATYNTMINAYCKQGKLENAIKLWNEMKGHSVMPNSITCNILVGG 549

Query: 418 FCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVD 477
             KA E + A ++L  ML  G  P+   +  L++        + +L++    V  GL  +
Sbjct: 550 LSKAGETERAIDVLNEMLLWGICPNVTIHRALLNACSKCERADTILQMHKRLVGMGLKAN 609

Query: 478 VSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRA 526
             VY +LI   C       A  + N M   GI  D+V Y +L + ++++
Sbjct: 610 REVYNSLITVLCGLGMTKRATLVLNNMTKEGISADTVTYNALIHGHFKS 658



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 132/509 (25%), Positives = 200/509 (39%), Gaps = 77/509 (15%)

Query: 106 LRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHL 165
           L D     S+L  + K    P  N    S ++  Y    M    +++  +M   N+MP+ 
Sbjct: 309 LGDMDGAESLLRDMEKKQVVP--NVVTYSSIINGYTKKGMLDVAVRIMKKMLDQNIMPNA 366

Query: 166 HACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCE 225
           +    L++   K    D    +Y +M   G+  N  + +  I+   +   +++ E L   
Sbjct: 367 YIYATLIDGHLKAGKQDAAVDLYNEMKLNGLEENSFIVDAFINNLKRGRKMEEAEGLCKY 426

Query: 226 MEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGR 285
           M  K +  D   Y +L+  + K G    A  + ++M   GI  D+V YN LI+G  R G+
Sbjct: 427 MMSKGLLLDRVNYTSLMDGFFKTGRESAAFTMAEKMAETGIKFDVVAYNVLINGLLRLGK 486

Query: 286 MREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNS 343
             +A  ++  I+  G  P+  TY T+I+ YC+   LE A++L   M    V P  +T N 
Sbjct: 487 Y-DAESVYSGIRELGLAPDRATYNTMINAYCKQGKLENAIKLWNEMKGHSVMPNSITCNI 545

Query: 344 ILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTC--------------------------- 376
           ++  L K G    A  +LNEM    I P NVT                            
Sbjct: 546 LVGGLSKAGETERAIDVLNEMLLWGICP-NVTIHRALLNACSKCERADTILQMHKRLVGM 604

Query: 377 ---------NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE---- 423
                    N+LI   C +G T  A  V N M + G+  D  TY ALIHG  K+      
Sbjct: 605 GLKANREVYNSLITVLCGLGMTKRATLVLNNMTKEGISADTVTYNALIHGHFKSSHIEKA 664

Query: 424 -------------------------------MDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
                                          M  A E+L  M D+G  P    Y+ L+ G
Sbjct: 665 LATYTQMLNEGVSPGIRTYNLLLGGLLAAGLMSKAYEILSKMKDSGLDPDASLYNTLISG 724

Query: 453 YCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGD 512
           +    N++  +K   E V++GL    S Y  LI  F K  K+D A+ L N MQ   +  +
Sbjct: 725 HGKIGNKKEAIKFYCEMVTKGLVPKTSTYNVLIEDFAKVGKMDQARELLNEMQVRRVPPN 784

Query: 513 SVIYTSLAYAYWRAGEPKACSDILDDMYR 541
           S  Y  L   +    +      I    YR
Sbjct: 785 SSTYDILICGWCNLSKQPELDRISKKTYR 813



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 58/222 (26%), Positives = 89/222 (40%), Gaps = 21/222 (9%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           +  L  + QM    + P +    +LL  L    L    +++  KM   G+  +  LYN L
Sbjct: 662 EKALATYTQMLNEGVSPGIRTYNLLLGGLLAAGLMSKAYEILSKMKDSGLDPDASLYNTL 721

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           I    K  +  +  K  CEM  K +     TYN LI  + K G   +A  + + M+   +
Sbjct: 722 ISGHGKIGNKKEAIKFYCEMVTKGLVPKTSTYNVLIEDFAKVGKMDQARELLNEMQVRRV 781

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLR 326
            P+  TY+ LI G+C   +  E  R+ +          TY T            EA  L 
Sbjct: 782 PPNSSTYDILICGWCNLSKQPELDRISKK---------TYRT------------EARTLF 820

Query: 327 EVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKK 368
             M  KG  P   T   I     + G + DA  +L +M ++K
Sbjct: 821 AEMNEKGFVPCENTLACISSTFARPGMVVDAKHMLKDMYKRK 862


>gi|242044666|ref|XP_002460204.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
 gi|241923581|gb|EER96725.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
          Length = 637

 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 115/392 (29%), Positives = 198/392 (50%), Gaps = 5/392 (1%)

Query: 130 SHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYK 189
           +  L  LVI  + + +  + L VF ++     +P L AC  +L+ L K R +   W+++ 
Sbjct: 111 APALGVLVIALSQMGLLDEALYVFRRLWT---LPALPACNAVLDGLVKARRSRCAWELFD 167

Query: 190 KMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKG 249
           +M++ G+V ++  YN LI+AC     V K +++  +M  + +  ++ TY ++I + C++G
Sbjct: 168 EMLRRGMVPSVVTYNTLINACRYQGAVAKAQEMWDQMVARQIDPNVITYTSMICVLCEEG 227

Query: 250 MHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYT 307
              +A  + D M+  G+ P+  TYN L+ G C+   +  A  L++++   G  PN V +T
Sbjct: 228 CIGDAERLFDAMKEAGMRPNQYTYNVLMSGHCQGDDVNSAFVLYQELLNSGLIPNAVVFT 287

Query: 308 TLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEK 367
           TLIDG+C+A    EA  +   M   GV P V  YNS++    + G  ++A  L  EM   
Sbjct: 288 TLIDGFCKAKRFSEAKDMFRDMPRFGVAPTVPVYNSLMDGAFRSGDAQEALSLYQEMTRL 347

Query: 368 KIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIA 427
            + PD  TC+ ++   C  G    A +    + E G+ L+   Y ALI  +C+   ++ A
Sbjct: 348 GLCPDEFTCSIVVRGLCDGGQIQVAARFLEGVREDGVNLNAAAYNALIDEYCRNGNLEEA 407

Query: 428 KELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRR 487
                 M + G  P+  SYS L+DG+      +  + +  E V++G+  +V  Y ALI  
Sbjct: 408 LATCTRMTEVGVEPNVVSYSSLIDGHSKLGKMQIAMAIYTEMVAKGIEPNVVTYTALIHG 467

Query: 488 FCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
             K   +D A R    M  NGI  +++  + L
Sbjct: 468 HAKNGGIDAAFRFHKEMIENGISPNAITVSVL 499



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 87/291 (29%), Positives = 143/291 (49%), Gaps = 5/291 (1%)

Query: 239 NTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI-- 296
             L+    + G+  EAL V  R+      P +   N+++ G  +  R R A  LF ++  
Sbjct: 115 GVLVIALSQMGLLDEALYVFRRL---WTLPALPACNAVLDGLVKARRSRCAWELFDEMLR 171

Query: 297 KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRD 356
           +G  P+ VTY TLI+       + +A  + + M A+ + P V+TY S++  LC+EG I D
Sbjct: 172 RGMVPSVVTYNTLINACRYQGAVAKAQEMWDQMVARQIDPNVITYTSMICVLCEEGCIGD 231

Query: 357 ANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIH 416
           A RL + M E  + P+  T N L++ +C+  D  SA  +   +L +GL+ +   +  LI 
Sbjct: 232 AERLFDAMKEAGMRPNQYTYNVLMSGHCQGDDVNSAFVLYQELLNSGLIPNAVVFTTLID 291

Query: 417 GFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCV 476
           GFCKAK    AK++   M   G +P+   Y+ L+DG     + +  L L  E    GLC 
Sbjct: 292 GFCKAKRFSEAKDMFRDMPRFGVAPTVPVYNSLMDGAFRSGDAQEALSLYQEMTRLGLCP 351

Query: 477 DVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
           D      ++R  C   ++  A R    ++ +G+  ++  Y +L   Y R G
Sbjct: 352 DEFTCSIVVRGLCDGGQIQVAARFLEGVREDGVNLNAAAYNALIDEYCRNG 402



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 87/332 (26%), Positives = 151/332 (45%), Gaps = 19/332 (5%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N+ V + L+  +   K   +   +F  M    + P +     L++   +         +Y
Sbjct: 282 NAVVFTTLIDGFCKAKRFSEAKDMFRDMPRFGVAPTVPVYNSLMDGAFRSGDAQEALSLY 341

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
           ++M +LG+  +    ++++   C    +    + L  +    V  +   YN LI  YC+ 
Sbjct: 342 QEMTRLGLCPDEFTCSIVVRGLCDGGQIQVAARFLEGVREDGVNLNAAAYNALIDEYCRN 401

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTY 306
           G   EALA   RM   G+ P++V+Y+SLI G  + G+M+ A  ++ ++  KG  PN VTY
Sbjct: 402 GNLEEALATCTRMTEVGVEPNVVSYSSLIDGHSKLGKMQIAMAIYTEMVAKGIEPNVVTY 461

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE--- 363
           T LI G+ +   ++ A R  + M   G+ P  +T + ++  LC+E R++DA R + E   
Sbjct: 462 TALIHGHAKNGGIDAAFRFHKEMIENGISPNAITVSVLVDGLCRENRVQDAVRFVMEHSG 521

Query: 364 --------------MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQF 409
                           E+ + P++    TLI      G    A K+ + M ++G++ D F
Sbjct: 522 IKYSDIHSFFSNFTTEEEPLIPNSAIYMTLIYGLYLDGQHYEAGKLFSYMRKSGMISDSF 581

Query: 410 TYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
           TY  LI G C    +  A  L   M+  G  P
Sbjct: 582 TYTLLIRGQCMLGYVLNAMMLYADMMKIGVKP 613



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 87/361 (24%), Positives = 153/361 (42%), Gaps = 54/361 (14%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D  ++FD M+   + P+ +   VL++   +    +  + +Y++++  G++ N  ++  LI
Sbjct: 231 DAERLFDAMKEAGMRPNQYTYNVLMSGHCQGDDVNSAFVLYQELLNSGLIPNAVVFTTLI 290

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
              CK+    + + +  +M    V   +  YN+L+    + G   EAL++   M R G+ 
Sbjct: 291 DGFCKAKRFSEAKDMFRDMPRFGVAPTVPVYNSLMDGAFRSGDAQEALSLYQEMTRLGLC 350

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRL 325
           PD  T + ++ G C  G+++ A R    ++  G   N   Y  LID YCR  +LEEAL  
Sbjct: 351 PDEFTCSIVVRGLCDGGQIQVAARFLEGVREDGVNLNAAAYNALIDEYCRNGNLEEALAT 410

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
              M   GV P VV+Y+S++    K G+++ A  +  EM  K I P+ VT   LI+ + K
Sbjct: 411 CTRMTEVGVEPNVVSYSSLIDGHSKLGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAK 470

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMD-------------------- 425
            G   +A +    M+E G+  +  T   L+ G C+   +                     
Sbjct: 471 NGGIDAAFRFHKEMIENGISPNAITVSVLVDGLCRENRVQDAVRFVMEHSGIKYSDIHSF 530

Query: 426 ----------------IAKELLFG----------------MLDAGFSPSYCSYSWLVDGY 453
                           I   L++G                M  +G      +Y+ L+ G 
Sbjct: 531 FSNFTTEEEPLIPNSAIYMTLIYGLYLDGQHYEAGKLFSYMRKSGMISDSFTYTLLIRGQ 590

Query: 454 C 454
           C
Sbjct: 591 C 591



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 75/306 (24%), Positives = 135/306 (44%), Gaps = 37/306 (12%)

Query: 259 DRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLI------ 310
           D M R G+ P +VTYN+LI+    +G + +A+ ++  +  +   PN +TYT++I      
Sbjct: 167 DEMLRRGMVPSVVTYNTLINACRYQGAVAKAQEMWDQMVARQIDPNVITYTSMICVLCEE 226

Query: 311 -----------------------------DGYCRANDLEEALRLREVMAAKGVYPGVVTY 341
                                         G+C+ +D+  A  L + +   G+ P  V +
Sbjct: 227 GCIGDAERLFDAMKEAGMRPNQYTYNVLMSGHCQGDDVNSAFVLYQELLNSGLIPNAVVF 286

Query: 342 NSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLE 401
            +++   CK  R  +A  +  +M    +AP     N+L++   + GD   A+ +   M  
Sbjct: 287 TTLIDGFCKAKRFSEAKDMFRDMPRFGVAPTVPVYNSLMDGAFRSGDAQEALSLYQEMTR 346

Query: 402 AGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEA 461
            GL  D+FT   ++ G C   ++ +A   L G+ + G + +  +Y+ L+D YC   N E 
Sbjct: 347 LGLCPDEFTCSIVVRGLCDGGQIQVAARFLEGVREDGVNLNAAAYNALIDEYCRNGNLEE 406

Query: 462 LLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAY 521
            L         G+  +V  Y +LI    K  K+  A  ++  M   GI  + V YT+L +
Sbjct: 407 ALATCTRMTEVGVEPNVVSYSSLIDGHSKLGKMQIAMAIYTEMVAKGIEPNVVTYTALIH 466

Query: 522 AYWRAG 527
            + + G
Sbjct: 467 GHAKNG 472


>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
 gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
          Length = 728

 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 144/565 (25%), Positives = 251/565 (44%), Gaps = 50/565 (8%)

Query: 30  LNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILT 89
           L P I    T+ ++   LLN       P+    F+ +   ++ +  HS     +++  + 
Sbjct: 22  LKPYIPHLSTNPSLLISLLNSKTLIQNPNTLLQFYTYLPPSITH--HSPLPLLSLLPSIL 79

Query: 90  KNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHV----LSWLVIFYANLKM 145
           + +HF +A+++L      D  S+   L    +  ++P    H+    L   +  Y     
Sbjct: 80  RYRHFYAAKSLLSSFIPVDKSSSLHYLLLHPQKTNNPVSCLHISKPLLDISIGAYVACGR 139

Query: 146 TQDGLQVFDQMRVHNLMPHLHACTVLLNSLAK---DRLTDMVWKVYKKMVQLGVVANIHL 202
                Q+F++M+   + P L  C  LLN+L +        +   V+   +++GV  N + 
Sbjct: 140 PHQAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIRLSKAVFTDFIKIGVKINTNS 199

Query: 203 YNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRME 262
           +N+LIH                                     C +    EA+ V  +M 
Sbjct: 200 FNILIHGS-----------------------------------CMENRFGEAIRVLGKMR 224

Query: 263 REGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLE 320
             G  PD +TYN+++ G C++GR+ EAR L  D+K  G  PN  T+  L+ G CR   L+
Sbjct: 225 DYGCPPDNITYNTILDGLCKKGRLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLK 284

Query: 321 EALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLI 380
           EA  + E+M+   V P   TYN ++   CK+GRI +A RL  EM   K++PD VT NTLI
Sbjct: 285 EAANVIELMSQNSVVPDAWTYNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLI 344

Query: 381 NAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFS 440
           N   + G +    K+   M   G+  +  TY  ++  F K  +MD   + +  M ++G  
Sbjct: 345 NGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCL 404

Query: 441 PSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRL 500
           P   +Y+ L+  +C     +   +L+DE   +GL +D      ++R  C++ K+D A  L
Sbjct: 405 PDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDL 464

Query: 501 FNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSAS--- 557
               +  G   D V Y +L   Y++  +      + D+M  + ++ ++  Y S  A    
Sbjct: 465 LCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQ 524

Query: 558 YAKDNEILDLFWSHVVDRGLMSKHI 582
             K N+ +D     +++ GL+   I
Sbjct: 525 MGKTNQAIDKL-DELLESGLVPDEI 548



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 115/393 (29%), Positives = 192/393 (48%), Gaps = 37/393 (9%)

Query: 187 VYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYC 246
           V + M Q  VV +   YNV+I   CK   + +  +L  EME   +  D+ TYNTLI    
Sbjct: 289 VIELMSQNSVVPDAWTYNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCF 348

Query: 247 KKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHV 304
           + G   E   + + ME  G+ P+ VTYN ++  F ++G+M E  +  R ++  G  P+ V
Sbjct: 349 EHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIV 408

Query: 305 TYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDAN------ 358
           TY TLI  +C+   ++EA RL + M  KG+    VT N++LR LC+E ++ +A+      
Sbjct: 409 TYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSA 468

Query: 359 -----------------------------RLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
                                        RL +EM EK+I P  +T N++I   C++G T
Sbjct: 469 RRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKT 528

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
             A+   + +LE+GL+ D+ TY  +IHG+C+  +++ A +    M++  F P   + + L
Sbjct: 529 NQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTL 588

Query: 450 VDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGI 509
           + G C +   E  LKL + ++S+G  VD   Y  +I   CK+++   A  L   M+   +
Sbjct: 589 LCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKL 648

Query: 510 LGDSVIYTSLAYAYWRAGEPKACSDILDDMYRR 542
             D   Y ++      AG  K   + +  +  +
Sbjct: 649 GPDCYTYNAILGGLTDAGRMKDAEEFISKIAEK 681



 Score = 91.7 bits (226), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 60/246 (24%), Positives = 115/246 (46%), Gaps = 25/246 (10%)

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           L+I Y   +     L+++D+M+   ++P +     ++  L +   T+       ++++ G
Sbjct: 483 LIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESG 542

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
           +V +   YN +IH  C+   V+K  +   +M  K+ + D+ T NTL+   CK+GM  +AL
Sbjct: 543 LVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKAL 602

Query: 256 AVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGY 313
            + +    +G   D V+YN++I   C+E R  EA  L  ++  K   P+  TY  ++ G 
Sbjct: 603 KLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGL 662

Query: 314 CRANDLEEALRLREVMAAKG-----------------------VYPGVVTYNSILRKLCK 350
             A  +++A      +A KG                        +P  + Y++ + +LC 
Sbjct: 663 TDAGRMKDAEEFISKIAEKGKSENQFLELGKRQDARTSEIPQEPHPNAIAYSNKINELCS 722

Query: 351 EGRIRD 356
           +GR +D
Sbjct: 723 QGRYKD 728


>gi|297800058|ref|XP_002867913.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297313749|gb|EFH44172.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 724

 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 124/427 (29%), Positives = 210/427 (49%), Gaps = 5/427 (1%)

Query: 126 PDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVW 185
           PD +S  L  +VI        Q+  +    M     +P    CT++L++L ++ L +   
Sbjct: 238 PDSSSFKL--MVIGCFRDGKIQEADRWLSGMIQRGFIPDNATCTLILSALCENGLVNRAI 295

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
             ++KM+ LG   N+  +  LI   CK   + +  ++L EM     + +++T+  LI   
Sbjct: 296 WYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGL 355

Query: 246 CKKGMHYEALAVQDRMEREGI-SPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPN 302
           CK+G   +A  +  ++ R  I  P++ TY S+I G+C+E ++  A  LF  +K  G  PN
Sbjct: 356 CKRGWTEKAFRLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPN 415

Query: 303 HVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLN 362
             TYTTLI+G+C+A + + A  L  +M  +G  P + TYN+++  LCK+ R  +A  LLN
Sbjct: 416 VNTYTTLINGHCKAGNFDRAYELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAYELLN 475

Query: 363 EMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAK 422
           +     +  D VT   LI   CK  D   A+    RM + G   D      LI  FC+ K
Sbjct: 476 KAFSCGLEADGVTYTILIQEQCKQSDIKQALAFFCRMNKTGFEADMRLNNILIAAFCRQK 535

Query: 423 EMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYR 482
           +M  ++ L   ++  G  P+  +Y+ ++ GYC + + +  LK        G   D   Y 
Sbjct: 536 KMKESERLFQLVVSLGLVPTKETYTSMISGYCKEGDFDLALKYFHNMKRHGCVPDSFTYG 595

Query: 483 ALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRR 542
           +LI   CKK  VD A +L+  M   G+    V   +LAY Y +  +  +   +L+ + ++
Sbjct: 596 SLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSASAMIVLEPLDKK 655

Query: 543 RLMITLK 549
             + T++
Sbjct: 656 LWIRTVR 662



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 106/398 (26%), Positives = 194/398 (48%), Gaps = 6/398 (1%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVV-ANIHLYNV 205
           +   ++ ++M  +   P+++  T L++ L K   T+  ++++ K+V+  +   N+H Y  
Sbjct: 327 KQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDIYKPNVHTYTS 386

Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
           +I   CK   +++ E L   M+ + +  ++ TY TLI  +CK G    A  + + M+ EG
Sbjct: 387 MIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGNFDRAYELMNLMDDEG 446

Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEAL 323
             P+I TYN++I   C++ R  EA  L       G   + VTYT LI   C+ +D+++AL
Sbjct: 447 FRPNIYTYNAVIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQSDIKQAL 506

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
                M   G    +   N ++   C++ +++++ RL   +    + P   T  ++I+ Y
Sbjct: 507 AFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLVPTKETYTSMISGY 566

Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY 443
           CK GD   A+K  + M   G + D FTY +LI G CK   +D A +L   M+D G SP  
Sbjct: 567 CKEGDFDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPE 626

Query: 444 CSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNL 503
            +   L   YC +N+  + + +L+    +   + +   R L+R+ C ++KV  A   F  
Sbjct: 627 VTRVTLAYEYCKRNDSASAMIVLEPLDKK---LWIRTVRTLVRKLCSEKKVGVAALFFQK 683

Query: 504 MQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
           +       D V   +   A   +G+    +D+ + + R
Sbjct: 684 LLEKDSSADRVTLAAFTTACSESGKNNLVADLTERISR 721



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 117/423 (27%), Positives = 190/423 (44%), Gaps = 22/423 (5%)

Query: 54  CHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTP 113
           C   S+  AF    E     +K ++ +H  +I  L K    + A  +  K+   D     
Sbjct: 321 CKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDIYKP- 379

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
                          N H  + ++  Y           +F +M+   L P+++  T L+N
Sbjct: 380 ---------------NVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLIN 424

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
              K    D  +++   M   G   NI+ YN +I + CK S   +  +LL +     + A
Sbjct: 425 GHCKAGNFDRAYELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAYELLNKAFSCGLEA 484

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           D  TY  LI   CK+    +ALA   RM + G   D+   N LI  FCR+ +M+E+ RLF
Sbjct: 485 DGVTYTILIQEQCKQSDIKQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLF 544

Query: 294 RDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
           + +   G  P   TYT++I GYC+  D + AL+    M   G  P   TY S++  LCK+
Sbjct: 545 QLVVSLGLVPTKETYTSMISGYCKEGDFDLALKYFHNMKRHGCVPDSFTYGSLISGLCKK 604

Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
             + +A +L   M ++ ++P  VT  TL   YCK  D+ASAM V    L+  L +   T 
Sbjct: 605 SMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSASAMIVLEP-LDKKLWIR--TV 661

Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
           + L+   C  K++ +A      +L+   S    + +      C+++ +  L+  L E +S
Sbjct: 662 RTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFTTA-CSESGKNNLVADLTERIS 720

Query: 472 RGL 474
           RG+
Sbjct: 721 RGV 723



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 115/401 (28%), Positives = 179/401 (44%), Gaps = 5/401 (1%)

Query: 179 RLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTY 238
           RL + V  V   M   G+  +    N ++    +S  +D  E +  EM  + V  D  ++
Sbjct: 185 RLNEAVGMVMD-MQNQGLSPSSITMNCVLEIAIESGLIDYAENVFDEMSVRGVCPDSSSF 243

Query: 239 NTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK- 297
             ++    + G   EA      M + G  PD  T   ++   C  G +  A   FR +  
Sbjct: 244 KLMVIGCFRDGKIQEADRWLSGMIQRGFIPDNATCTLILSALCENGLVNRAIWYFRKMID 303

Query: 298 -GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRD 356
            G  PN + +T+LIDG C+   +++A  + E M   G  P V T+ +++  LCK G    
Sbjct: 304 LGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEK 363

Query: 357 ANRLLNEMNEKKIAPDNV-TCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALI 415
           A RL  ++    I   NV T  ++I  YCK      A  + +RM E GL  +  TY  LI
Sbjct: 364 AFRLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLI 423

Query: 416 HGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLC 475
           +G CKA   D A EL+  M D GF P+  +Y+ ++D  C K+      +LL++  S GL 
Sbjct: 424 NGHCKAGNFDRAYELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAYELLNKAFSCGLE 483

Query: 476 VDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDI 535
            D   Y  LI+  CK+  +  A   F  M   G   D  +   L  A+ R  + K    +
Sbjct: 484 ADGVTYTILIQEQCKQSDIKQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERL 543

Query: 536 LDDMYRRRLMITLKIYRSFSASYAKDNEI-LDLFWSHVVDR 575
              +    L+ T + Y S  + Y K+ +  L L + H + R
Sbjct: 544 FQLVVSLGLVPTKETYTSMISGYCKEGDFDLALKYFHNMKR 584



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 65/255 (25%), Positives = 137/255 (53%), Gaps = 3/255 (1%)

Query: 276 LIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKG 333
           ++  F   GR+ EA  +  D++  G +P+ +T   +++    +  ++ A  + + M+ +G
Sbjct: 176 MLRNFSEIGRLNEAVGMVMDMQNQGLSPSSITMNCVLEIAIESGLIDYAENVFDEMSVRG 235

Query: 334 VYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAM 393
           V P   ++  ++    ++G+I++A+R L+ M ++   PDN TC  +++A C+ G    A+
Sbjct: 236 VCPDSSSFKLMVIGCFRDGKIQEADRWLSGMIQRGFIPDNATCTLILSALCENGLVNRAI 295

Query: 394 KVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGY 453
               +M++ G   +   + +LI G CK   +  A E+L  M+  G+ P+  +++ L+DG 
Sbjct: 296 WYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGL 355

Query: 454 CNKNNEEALLKLLDEFVSRGLC-VDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGD 512
           C +   E   +L  + V   +   +V  Y ++I  +CK++K++ A+ LF+ M+  G+  +
Sbjct: 356 CKRGWTEKAFRLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPN 415

Query: 513 SVIYTSLAYAYWRAG 527
              YT+L   + +AG
Sbjct: 416 VNTYTTLINGHCKAG 430


>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
          Length = 2021

 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 119/431 (27%), Positives = 208/431 (48%), Gaps = 4/431 (0%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           SVL  ++K+   PD  +     L+          + L +FD+M      P++     L+N
Sbjct: 121 SVLAKILKLGHQPDPTTFTT--LIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLIN 178

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
            L K   T    ++ + M Q     ++ +Y  +I + CK   V +   L  +M  + +  
Sbjct: 179 GLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISP 238

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           D+FTY +L+   C          + ++M    I PD+V +++++   C+EG++ EA  + 
Sbjct: 239 DIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIV 298

Query: 294 RDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
             +  +G  P+ VTYTTL+DG+C  ++++EA+++ ++M  KG  P V++Y +++   CK 
Sbjct: 299 DMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKI 358

Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
            +I  A  L  EM  K+  PD  T NTL+   C +G    A+ + + M+  G M D  TY
Sbjct: 359 HKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTY 418

Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
             L+   CK + ++ A  LL  +  +  +P    Y+ ++DG C     EA   L     S
Sbjct: 419 SILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSS 478

Query: 472 RGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKA 531
           +GL   V  Y  +I   CK+  ++ A +LF  M GN    D   Y ++A  + +  E   
Sbjct: 479 KGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLR 538

Query: 532 CSDILDDMYRR 542
              +L++M  R
Sbjct: 539 AIQLLEEMLAR 549



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 136/513 (26%), Positives = 241/513 (46%), Gaps = 37/513 (7%)

Query: 13  FIKTISAIMLKGHWAKLLNPNIASSLTSTAIHK------VLLNLYNCCHIPSLSCAFFKW 66
           F K +++I    H++ +L+  +++ + S  +        +L+N +  CH+  +  AF   
Sbjct: 68  FAKLLTSIAKMKHYSTVLS--LSTQMDSFGVPPNVYTLNILINSF--CHLNRVGFAFSVL 123

Query: 67  AESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDF----LSTPSVLNALVKI 122
           A+     ++    +  T+I  L        A ++ +K+    F    ++  +++N L K+
Sbjct: 124 AKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKV 183

Query: 123 HDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTD 182
                GN                T   +++   M   N  P +   T +++SL KDR   
Sbjct: 184 -----GN----------------TSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVT 222

Query: 183 MVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLI 242
             + ++ +MV  G+  +I  Y  L+HA C   +   V  LL +M    +  D+  ++T++
Sbjct: 223 EAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVV 282

Query: 243 ALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGAT 300
              CK+G   EA  + D M + G+ PD+VTY +L+ G C +  M EA ++F  +  KG  
Sbjct: 283 DALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFA 342

Query: 301 PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRL 360
           P+ ++YTTLI+GYC+ + +++A+ L E M  K   P   TYN+++  LC  GR++DA  L
Sbjct: 343 PDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIAL 402

Query: 361 LNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCK 420
            +EM  +   PD VT + L+++ CK      AM +   +  + L  D   Y  +I G C+
Sbjct: 403 FHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCR 462

Query: 421 AKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSV 480
           A E++ A++L   +   G  PS  +Y+ ++ G C +       KL  E        D   
Sbjct: 463 AGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCT 522

Query: 481 YRALIRRFCKKEKVDYAQRLFNLMQGNGILGDS 513
           Y  + R F +  +   A +L   M   G   DS
Sbjct: 523 YNTIARGFLQNNETLRAIQLLEEMLARGFSADS 555



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 120/441 (27%), Positives = 207/441 (46%), Gaps = 37/441 (8%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D L  F+++   +  P +     LL S+AK +    V  +  +M   GV  N++  N+LI
Sbjct: 48  DALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILI 107

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           ++ C  + V     +L ++     + D  T+ TLI   C +G   EAL + D+M  EG  
Sbjct: 108 NSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQ 167

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDIKGAT--PNHVTYTTLIDGYCRANDLEEALRL 325
           P++VTY +LI+G C+ G    A RL R ++     P+ V YT++ID  C+   + EA  L
Sbjct: 168 PNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNL 227

Query: 326 REVMAAKGVYPGVVTYNS-----------------------------------ILRKLCK 350
              M  +G+ P + TY S                                   ++  LCK
Sbjct: 228 FSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCK 287

Query: 351 EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
           EG++ +A+ +++ M ++ + PD VT  TL++ +C   +   A+KV + M+  G   D  +
Sbjct: 288 EGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVIS 347

Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFV 470
           Y  LI+G+CK  ++D A  L   M    + P   +Y+ L+ G C+    +  + L  E V
Sbjct: 348 YTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMV 407

Query: 471 SRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPK 530
           +RG   D+  Y  L+   CK   ++ A  L   ++ + +  D  +Y  +     RAGE +
Sbjct: 408 ARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELE 467

Query: 531 ACSDILDDMYRRRLMITLKIY 551
           A  D+  ++  + L  ++  Y
Sbjct: 468 AARDLFSNLSSKGLHPSVWTY 488



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 89/295 (30%), Positives = 149/295 (50%), Gaps = 2/295 (0%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           + +QM    ++P +   + ++++L K+       ++   M+Q GV  ++  Y  L+   C
Sbjct: 262 LLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHC 321

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
             S++D+  K+   M  K    D+ +Y TLI  YCK     +A+ + + M R+   PD  
Sbjct: 322 LQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTK 381

Query: 272 TYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           TYN+L++G C  GR+++A  LF ++  +G  P+ VTY+ L+D  C+   LEEA+ L + +
Sbjct: 382 TYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAI 441

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
            A  + P +  YN I+  +C+ G +  A  L + ++ K + P   T N +I+  CK G  
Sbjct: 442 EASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLL 501

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
             A K+   M       D  TY  +  GF +  E   A +LL  ML  GFS   C
Sbjct: 502 NEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADSC 556



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 64/231 (27%), Positives = 108/231 (46%)

Query: 336 PGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKV 395
           P +V +  +L  + K         L  +M+   + P+  T N LIN++C +     A  V
Sbjct: 63  PSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSV 122

Query: 396 KNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCN 455
             ++L+ G   D  T+  LI G C   ++  A  L   M+D GF P+  +Y  L++G C 
Sbjct: 123 LAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCK 182

Query: 456 KNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVI 515
             N  A ++LL          DV +Y ++I   CK  +V  A  LF+ M G GI  D   
Sbjct: 183 VGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFT 242

Query: 516 YTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
           YTSL +A     E K  + +L+ M   +++  + I+ +   +  K+ ++ +
Sbjct: 243 YTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTE 293



 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 65/266 (24%), Positives = 112/266 (42%)

Query: 299 ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDAN 358
             P+ V +  L+    +       L L   M + GV P V T N ++   C   R+  A 
Sbjct: 61  PPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAF 120

Query: 359 RLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGF 418
            +L ++ +    PD  T  TLI   C  G    A+ + ++M++ G   +  TY  LI+G 
Sbjct: 121 SVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGL 180

Query: 419 CKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDV 478
           CK      A  LL  M      P    Y+ ++D  C          L  + V +G+  D+
Sbjct: 181 CKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDI 240

Query: 479 SVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDD 538
             Y +L+   C   +  +   L N M  + IL D VI++++  A  + G+     +I+D 
Sbjct: 241 FTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDM 300

Query: 539 MYRRRLMITLKIYRSFSASYAKDNEI 564
           M +R +   +  Y +    +   +E+
Sbjct: 301 MIQRGVEPDVVTYTTLMDGHCLQSEM 326



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 47/194 (24%), Positives = 79/194 (40%), Gaps = 3/194 (1%)

Query: 392 AMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVD 451
           A+   NR+L          +  L+    K K       L   M   G  P+  + + L++
Sbjct: 49  ALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILIN 108

Query: 452 GYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILG 511
            +C+ N       +L + +  G   D + +  LIR  C + K+  A  LF+ M   G   
Sbjct: 109 SFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQP 168

Query: 512 DSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLF--W 569
           + V Y +L     + G   A   +L  M +      + IY S   S  KD ++ + F  +
Sbjct: 169 NVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLF 228

Query: 570 SHVVDRGLMSKHIF 583
           S +V +G+ S  IF
Sbjct: 229 SQMVGQGI-SPDIF 241


>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 594

 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 129/461 (27%), Positives = 217/461 (47%), Gaps = 40/461 (8%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D L  F+QM   N  P +     LL +L + +  D V  +Y+KM   GV  +++   +LI
Sbjct: 87  DALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTLTILI 146

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           +  C    V     +L ++     +  + T+NTLI   C +G   EA+   D +   G  
Sbjct: 147 NCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQ 206

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRL 325
           P + T+  +++G C+ G+   A    + +      P  V+Y+ +ID  C+   + EA+ L
Sbjct: 207 PTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDL 266

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
              M + G+ P VVTYNS++  +C  G+ + A+ L  EM E  + PD VT + L++A CK
Sbjct: 267 FYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCK 326

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHG---------------------------- 417
            G    A+ V  +M++  +  D  TY +LIHG                            
Sbjct: 327 EGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVT 386

Query: 418 -------FCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFV 470
                  FCK   +  A+ ++  M++ G  P+  +Y+ L+DGYC  +  +   K+ D  V
Sbjct: 387 FSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMV 446

Query: 471 SRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPK 530
           ++G   DV  Y  LI+ +CK E++D A++LF+ M   G+  +S+ +T+L     +AG P 
Sbjct: 447 NKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPY 506

Query: 531 ACSDILDDMYRRRLMITLKIYRSFSASYAKD---NEILDLF 568
           A  ++   M        L  Y +  + + K    +E L LF
Sbjct: 507 AAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALF 547



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 111/385 (28%), Positives = 195/385 (50%), Gaps = 6/385 (1%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTD--MVWKVYKKMVQLGVVANIHLYNV 205
           + ++  D +      P ++  T+++N L K   T   +VW   KKMV+L     +  Y++
Sbjct: 192 EAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVW--MKKMVELDCEPEVVSYSI 249

Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
           +I + CK+  V++   L   M    +   + TYN+LI   C  G   +A  +   M    
Sbjct: 250 IIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWN 309

Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEAL 323
           + PD+VT++ L+   C+EG + EA  +F  +      P+ VTY++LI G C+++  +E+ 
Sbjct: 310 MKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESS 369

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
            L   M ++ + P VVT++  +   CK+G + +A  ++N M E+ + P+ VT N+L++ Y
Sbjct: 370 TLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGY 429

Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY 443
           C       A KV + M+  G   D  +Y  LI G+CK++ +D AK+L   M   G +P+ 
Sbjct: 430 CLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNS 489

Query: 444 CSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNL 503
            +++ L+ G C      A  +L  +  S G   D+  Y  L+  FCK   +D A  LF  
Sbjct: 490 ITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEA 549

Query: 504 MQGNGILGDSVIYTSLAYAYWRAGE 528
           ++ + +  + VI   L     +AG+
Sbjct: 550 LKKSQLKPNHVICKILLGGMCKAGK 574



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 126/471 (26%), Positives = 215/471 (45%), Gaps = 63/471 (13%)

Query: 50  LYNC-CHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRD 108
           L NC CH+  +   F    +     +K S+ +  T+I+ L        A   L+ I  R 
Sbjct: 145 LINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRG 204

Query: 109 FLST----PSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPH 164
           +  T      ++N L KI       S  + W+                  +M   +  P 
Sbjct: 205 YQPTVYTHTMIVNGLCKIGK----TSAAIVWM-----------------KKMVELDCEPE 243

Query: 165 LHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLC 224
           + + +++++SL K+RL +    ++  M  +G+   +  YN LI+  C S    +   L  
Sbjct: 244 VVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFK 303

Query: 225 EMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHG----- 279
           EM   +++ D+ T++ L+   CK+G+  EAL+V  +M +  + PDIVTY+SLIHG     
Sbjct: 304 EMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSS 363

Query: 280 ------------------------------FCREGRMREARRLFRDI--KGATPNHVTYT 307
                                         FC++G + EA+ +   +  +G  PN VTY 
Sbjct: 364 LWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYN 423

Query: 308 TLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEK 367
           +L+DGYC  + ++EA ++ ++M  KG  P V++YN +++  CK  RI +A +L +EM+ K
Sbjct: 424 SLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHK 483

Query: 368 KIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIA 427
            + P+++T  TLI+  C+ G   +A ++  +M   G   D  TY  L+ GFCK   +D A
Sbjct: 484 GLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEA 543

Query: 428 KELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDV 478
             L   +  +   P++     L+ G C     E   +L        L  DV
Sbjct: 544 LALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKELFSSLSIEELQPDV 594



 Score = 55.5 bits (132), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 56/236 (23%), Positives = 88/236 (37%), Gaps = 38/236 (16%)

Query: 342 NSILRKLCKEGRIR---DANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNR 398
           N  +R  CK G      DA    N+M      P     N L+ A  ++    S + +  +
Sbjct: 70  NFAVRDKCKGGSFSNFDDALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRK 129

Query: 399 MLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNN 458
           M   G+    +T   LI+  C    + +   +L  +   GF PS  +++ L++G C +  
Sbjct: 130 MEFFGVSCSVYTLTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGR 189

Query: 459 EEALLKLLDEFVSR--------------GLC---------------------VDVSVYRA 483
               ++ LD  +SR              GLC                      +V  Y  
Sbjct: 190 IVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSI 249

Query: 484 LIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
           +I   CK   V+ A  LF  M+  GI    V Y SL Y    +G+ K  S +  +M
Sbjct: 250 IIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEM 305


>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Vitis vinifera]
          Length = 822

 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 139/491 (28%), Positives = 236/491 (48%), Gaps = 28/491 (5%)

Query: 48  LNLYNCCHIPSLSCAFFKWAESAVPNYKH--------SLQSHWTMIHILTKNKHFKSAQN 99
            +LY+C  +  +  A F+  E A   YK         SL +  T+I+IL+K    + A+ 
Sbjct: 161 FSLYSCNTL-LIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAEL 219

Query: 100 MLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVH 159
           +L +I   D   +P V                  + L++ +   +       VFD+M   
Sbjct: 220 ILSQIFQYDL--SPDVF---------------TYTSLILGHCRNRNLDLAFGVFDRMVKE 262

Query: 160 NLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKV 219
              P+    + L+N L  +   D    + ++M++ G+   ++ Y + I A C     ++ 
Sbjct: 263 GCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEA 322

Query: 220 EKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHG 279
            +L+  M+ +  R ++ TY  LI+   + G    A+ +  +M +EG+ P+ VTYN+LI+ 
Sbjct: 323 IELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINE 382

Query: 280 FCREGRMREARRLFR--DIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPG 337
            C  GR   A ++F   +  G+  N  TY  +I G C   D+E+A+ L E M   G  P 
Sbjct: 383 LCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPT 442

Query: 338 VVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKN 397
           VVTYN+++     +G + +A RLL+ M E    PD  T N L++ + K G   SA     
Sbjct: 443 VVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQ 502

Query: 398 RMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKN 457
            M+E GL  +  +Y ALI G  K  ++DIA  LL  M + G +P+  SY+ +++G   +N
Sbjct: 503 EMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKEN 562

Query: 458 NEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYT 517
                 K+ D+ V +GL  +V  Y  LI   C+  +  +A ++F+ M+    L +   Y+
Sbjct: 563 RFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYS 622

Query: 518 SLAYAYWRAGE 528
           SL Y   + G+
Sbjct: 623 SLIYGLCQEGK 633



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 147/532 (27%), Positives = 237/532 (44%), Gaps = 41/532 (7%)

Query: 63  FFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNM--LEKIALRDFLSTPSVLNALV 120
           FF W  S  P YKH++    +M++ L +++ F  A ++  L   A R+      V + L 
Sbjct: 94  FFYWI-SKRPFYKHNMNCFISMLNRLVRDRVFAPADHIRILMIKACRNEEEIRRVADFLN 152

Query: 121 KIHDDPDGNS-HVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAK-- 177
           +I     G S +  + L+I  A  +M +    ++ QM    + P L     L+N L+K  
Sbjct: 153 EISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKG 212

Query: 178 ---------------------------------DRLTDMVWKVYKKMVQLGVVANIHLYN 204
                                            +R  D+ + V+ +MV+ G   N   Y+
Sbjct: 213 KVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYS 272

Query: 205 VLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMERE 264
            LI+  C    VD+   +L EM  K +   ++TY   I   C      EA+ +  RM++ 
Sbjct: 273 TLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKR 332

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEA 322
           G  P++ TY +LI G  R G++  A  L+  +  +G  PN VTY  LI+  C       A
Sbjct: 333 GCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTA 392

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
           L++   M   G      TYN I++ LC  G I  A  L  +M +    P  VT NTLIN 
Sbjct: 393 LKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLING 452

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           Y   G+  +A ++ + M E G   D++TY  L+ GF K  +++ A      M++ G +P+
Sbjct: 453 YLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPN 512

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             SY+ L+DG+      +  L LL      G   +V  Y A+I    K+ +   A+++ +
Sbjct: 513 PVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICD 572

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSF 554
            M   G+L + + YT+L     R G  +    I  DM +R+ +  L  Y S 
Sbjct: 573 KMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSL 624



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 129/460 (28%), Positives = 208/460 (45%), Gaps = 41/460 (8%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N    + L+   + L   +  + ++ +M    L+P+      L+N L          K++
Sbjct: 337 NVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIF 396

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
             M   G +AN   YN +I   C   D++K   L  +M        + TYNTLI  Y  K
Sbjct: 397 HWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTK 456

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTY 306
           G    A  + D M+  G  PD  TYN L+ GF + G++  A   F+++   G  PN V+Y
Sbjct: 457 GNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSY 516

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
           T LIDG+ +   ++ AL L + M   G  P V +YN+++  L KE R  +A ++ ++M E
Sbjct: 517 TALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVE 576

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
           + + P+ +T  TLI+  C+ G T  A K+ + M +   + + +TY +LI+G C+  + D 
Sbjct: 577 QGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADE 636

Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVD--------- 477
           A+     M + G  P+  +YS LV G C K       +L+ +   RG C D         
Sbjct: 637 AER----MSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLI 692

Query: 478 --------------------------VSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILG 511
                                     +S+YRALI   CK  +V+ AQ LF+ M       
Sbjct: 693 AHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNA 752

Query: 512 DSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIY 551
           D +++T L     + GE   C  +L  M  +     ++ Y
Sbjct: 753 DEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTY 792



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 127/422 (30%), Positives = 208/422 (49%), Gaps = 4/422 (0%)

Query: 165 LHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLC 224
           L++C  LL  LAK  + +    +YK+M+  G+  ++  +N LI+   K   V + E +L 
Sbjct: 163 LYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILS 222

Query: 225 EMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREG 284
           ++   D+  D+FTY +LI  +C+      A  V DRM +EG  P+ VTY++LI+G C EG
Sbjct: 223 QIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEG 282

Query: 285 RMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYN 342
           R+ EA  +  ++  KG  P   TYT  I   C     EEA+ L   M  +G  P V TY 
Sbjct: 283 RVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYT 342

Query: 343 SILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEA 402
           +++  L + G++  A  L ++M ++ + P+ VT N LIN  C  G  ++A+K+ + M   
Sbjct: 343 ALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGH 402

Query: 403 GLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEAL 462
           G + +  TY  +I G C   +++ A  L   ML  G  P+  +Y+ L++GY  K N    
Sbjct: 403 GSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNA 462

Query: 463 LKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYA 522
            +LLD     G   D   Y  L+  F K  K++ A   F  M   G+  + V YT+L   
Sbjct: 463 ARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDG 522

Query: 523 YWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDL--FWSHVVDRGLMSK 580
           + + G+      +L  M        ++ Y +     +K+N   +       +V++GL+  
Sbjct: 523 HSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPN 582

Query: 581 HI 582
            I
Sbjct: 583 VI 584



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 135/526 (25%), Positives = 229/526 (43%), Gaps = 17/526 (3%)

Query: 44  HKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEK 103
           H  +L   N    P +S  F      AVP  +   Q+  + +  +     +K +  + + 
Sbjct: 16  HSSVLGFLNFSSKPHISSHF------AVPASREPFQAIVSRVCAILSRVQWKGSSELKQ- 68

Query: 104 IALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLV--IFYA-NLKMTQDGLQVFDQMRVHN 160
             L   L    V   +V +H D +       W+    FY  N+      L    + RV  
Sbjct: 69  --LSPQLKAHHVAE-IVAVHKDTESVIQFFYWISKRPFYKHNMNCFISMLNRLVRDRV-- 123

Query: 161 LMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVE 220
             P  H   +++ +   +     V     ++  +G   +++  N L+    K   V+   
Sbjct: 124 FAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGAR 183

Query: 221 KLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGF 280
            L  +M    ++  L T+NTLI +  KKG   EA  +  ++ +  +SPD+ TY SLI G 
Sbjct: 184 NLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGH 243

Query: 281 CREGRMREARRLF-RDIK-GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGV 338
           CR   +  A  +F R +K G  PN VTY+TLI+G C    ++EAL + E M  KG+ P V
Sbjct: 244 CRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTV 303

Query: 339 VTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNR 398
            TY   +  LC      +A  L+  M ++   P+  T   LI+   ++G    A+ + ++
Sbjct: 304 YTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHK 363

Query: 399 MLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNN 458
           ML+ GL+ +  TY ALI+  C       A ++   M   G   +  +Y+ ++ G C   +
Sbjct: 364 MLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGD 423

Query: 459 EEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTS 518
            E  + L ++ +  G    V  Y  LI  +  K  V+ A RL +LM+ NG   D   Y  
Sbjct: 424 IEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNE 483

Query: 519 LAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
           L   + + G+ ++ S    +M    L      Y +    ++KD ++
Sbjct: 484 LVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKV 529



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 92/305 (30%), Positives = 158/305 (51%), Gaps = 6/305 (1%)

Query: 188 YKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCK 247
           +++MV+ G+  N   Y  LI    K   VD    LL  ME      ++ +YN +I    K
Sbjct: 501 FQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSK 560

Query: 248 KGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVT 305
           +    EA  + D+M  +G+ P+++TY +LI G CR GR + A ++F D+  +   PN  T
Sbjct: 561 ENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYT 620

Query: 306 YTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMN 365
           Y++LI G C+    +EA R+ E+    G  P + TY++++  LC++GR  +A +L+ +M 
Sbjct: 621 YSSLIYGLCQEGKADEAERMSEI----GCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMK 676

Query: 366 EKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMD 425
           E+   PD     +L+ A+CK  +   A+K+ + +   G  L    Y+ALI   CKA +++
Sbjct: 677 ERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVE 736

Query: 426 IAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
            A+ L   ML+  ++     ++ LVDG   +   +  +KLL    S+    ++  Y  L 
Sbjct: 737 EAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILG 796

Query: 486 RRFCK 490
           R   +
Sbjct: 797 RELSR 801


>gi|91806021|gb|ABE65739.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 450

 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 115/407 (28%), Positives = 204/407 (50%), Gaps = 4/407 (0%)

Query: 132 VLSWLVIFYANLKM--TQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYK 189
           V+++  I     KM  T+  L +  +M   ++ P +   + +++ L KD        ++ 
Sbjct: 45  VVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFS 104

Query: 190 KMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKG 249
           +M++ G+  N+  YN +I   C        ++LL +M  +++  D+ T+N LI+   K+G
Sbjct: 105 EMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEG 164

Query: 250 MHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTL 309
             +EA  + D M    I PD VTYNS+I+GFC+  R  +A+ +F  +  A+P+ VT+ T+
Sbjct: 165 KLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM--ASPDVVTFNTI 222

Query: 310 IDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI 369
           ID YCRA  ++E ++L   ++ +G+     TYN+++   C+   +  A  L  EM    +
Sbjct: 223 IDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGV 282

Query: 370 APDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKE 429
            PD +TCN L+  +C+      A+++   +  + + LD   Y  +IHG CK  ++D A +
Sbjct: 283 CPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWD 342

Query: 430 LLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFC 489
           L   +   G  P   +Y+ ++ G+C K+       L  +    G   D S Y  LIR   
Sbjct: 343 LFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCL 402

Query: 490 KKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDIL 536
           K  ++D +  L + M+ NG  GD+     +A         K+ SD+L
Sbjct: 403 KAGEIDKSIELISEMRSNGFSGDAFTIKMVADLITDGRLDKSFSDML 449



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 117/417 (28%), Positives = 191/417 (45%), Gaps = 41/417 (9%)

Query: 160 NLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKV 219
            L P +     L+N L  +        +  KMV  G+  ++  Y  +++  CK  D    
Sbjct: 5   GLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSA 64

Query: 220 EKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHG 279
             LL +ME   ++ D+  Y+ +I   CK G H +A  +   M  +GI+P++ TYN +I G
Sbjct: 65  LNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDG 124

Query: 280 FCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPG 337
           FC  GR  +A+RL RD+  +   P+ +T+  LI    +   L EA +L + M  + ++P 
Sbjct: 125 FCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPD 184

Query: 338 VVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKN 397
            VTYNS++   CK  R  DA  + + M     +PD VT NT+I+ YC+       M++  
Sbjct: 185 TVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLR 240

Query: 398 RMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKN 457
            +   GL+ +  TY  LIHGFC+   ++ A++L   M+  G  P   + + L+ G+C   
Sbjct: 241 EISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENE 300

Query: 458 NEEALLKLLD--------------EFVSRGLC---------------------VDVSVYR 482
             E  L+L +                +  G+C                      DV  Y 
Sbjct: 301 KLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYN 360

Query: 483 ALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
            +I  FC K  +  A  LF+ M+ NG   D+  Y +L     +AGE     +++ +M
Sbjct: 361 VMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEM 417



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 106/344 (30%), Positives = 177/344 (51%), Gaps = 18/344 (5%)

Query: 191 MVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGM 250
           MV++G+   +  +N LI+  C    V +   L+ +M  K +  D+ TY T++   CK G 
Sbjct: 1   MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 60

Query: 251 HYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTT 308
              AL +  +ME   I PD+V Y+++I   C++G   +A+ LF ++  KG  PN  TY  
Sbjct: 61  TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 120

Query: 309 LIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKK 368
           +IDG+C      +A RL   M  + + P V+T+N+++    KEG++ +A +L +EM  + 
Sbjct: 121 MIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC 180

Query: 369 IAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQF------TYKALIHGFCKAK 422
           I PD VT N++I  +CK           NR  +A  M D        T+  +I  +C+AK
Sbjct: 181 IFPDTVTYNSMIYGFCK----------HNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAK 230

Query: 423 EMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYR 482
            +D   +LL  +   G   +  +Y+ L+ G+C  +N  A   L  E +S G+C D     
Sbjct: 231 RVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCN 290

Query: 483 ALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRA 526
            L+  FC+ EK++ A  LF ++Q + I  D+V Y  + +   + 
Sbjct: 291 ILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKG 334



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 80/263 (30%), Positives = 128/263 (48%), Gaps = 4/263 (1%)

Query: 298 GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDA 357
           G TP  +T+ TLI+G C    + EA  L   M  KG++  VVTY +I+  +CK G  + A
Sbjct: 5   GLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSA 64

Query: 358 NRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHG 417
             LL++M E  I PD V  + +I+  CK G  + A  + + MLE G+  + FTY  +I G
Sbjct: 65  LNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDG 124

Query: 418 FCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVD 477
           FC       A+ LL  M++   +P   +++ L+     +       KL DE + R +  D
Sbjct: 125 FCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPD 184

Query: 478 VSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILD 537
              Y ++I  FCK  + D A+ +F+LM       D V + ++   Y RA        +L 
Sbjct: 185 TVTYNSMIYGFCKHNRFDDAKHMFDLMASP----DVVTFNTIIDVYCRAKRVDEGMQLLR 240

Query: 538 DMYRRRLMITLKIYRSFSASYAK 560
           ++ RR L+     Y +    + +
Sbjct: 241 EISRRGLVANTTTYNTLIHGFCE 263



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/277 (21%), Positives = 128/277 (46%), Gaps = 24/277 (8%)

Query: 80  SHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIF 139
           ++ +MI+   K+  F  A++M       D +++P V+                 + ++  
Sbjct: 187 TYNSMIYGFCKHNRFDDAKHMF------DLMASPDVV---------------TFNTIIDV 225

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
           Y   K   +G+Q+  ++    L+ +      L++   +    +    ++++M+  GV  +
Sbjct: 226 YCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPD 285

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
               N+L++  C++  +++  +L   ++   +  D   YN +I   CK     EA  +  
Sbjct: 286 TITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFC 345

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRAN 317
            +   G+ PD+ TYN +I GFC +  + +A  LF  +K  G  P++ TY TLI G  +A 
Sbjct: 346 SLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAG 405

Query: 318 DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRI 354
           ++++++ L   M + G + G      ++  L  +GR+
Sbjct: 406 EIDKSIELISEMRSNG-FSGDAFTIKMVADLITDGRL 441



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 86/203 (42%)

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
           M E  + P  +T NTLIN  C  G    A  + N+M+  GL +D  TY  +++G CK  +
Sbjct: 1   MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 60

Query: 424 MDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRA 483
              A  LL  M +    P    YS ++D  C   +      L  E + +G+  +V  Y  
Sbjct: 61  TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 120

Query: 484 LIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRR 543
           +I  FC   +   AQRL   M    I  D + + +L  A  + G+      + D+M  R 
Sbjct: 121 MIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC 180

Query: 544 LMITLKIYRSFSASYAKDNEILD 566
           +      Y S    + K N   D
Sbjct: 181 IFPDTVTYNSMIYGFCKHNRFDD 203


>gi|15227316|ref|NP_179280.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75217061|sp|Q9ZVX5.1|PP156_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g16880
 gi|3757517|gb|AAC64219.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|18175643|gb|AAL59902.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|20465657|gb|AAM20297.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|330251452|gb|AEC06546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 743

 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 142/559 (25%), Positives = 264/559 (47%), Gaps = 53/559 (9%)

Query: 10  DTKFIKTISAIML--KGHWAKLLNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWA 67
           +++ +KT+++I+   K H+ + LNP I     +  +   LL+  +    P    +FF+WA
Sbjct: 8   ESQLLKTLTSILTSEKTHFLETLNPYIPQ--ITQPLLTSLLSSPSLAKKPETLVSFFQWA 65

Query: 68  ESAVPNYKHSLQSHWTMIHI---LTKNKHFKSAQNMLEKIALRDFLSTPSVLNALV--KI 122
           ++++P    S  S   +I +   L  +  F  A+++L    +R   ++ S+ N+L+   +
Sbjct: 66  QTSIPEAFPS-DSPLPLISVVRSLLSHHKFADAKSLLVSY-IRTSDASLSLCNSLLHPNL 123

Query: 123 HDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLT- 181
           H  P  +  +    +  Y +       LQ+F +M    L P+L  C  LL  L +   + 
Sbjct: 124 HLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSF 183

Query: 182 --DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYN 239
                 +V+  MV++GV  N+                                    T+N
Sbjct: 184 SISSAREVFDDMVKIGVSLNVQ-----------------------------------TFN 208

Query: 240 TLIALYCKKGMHYEALAVQDRMERE-GISPDIVTYNSLIHGFCREGRMREARRLFRDIK- 297
            L+  YC +G   +AL + +RM  E  ++PD VTYN+++    ++GR+ + + L  D+K 
Sbjct: 209 VLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKK 268

Query: 298 -GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRD 356
            G  PN VTY  L+ GYC+   L+EA ++ E+M    V P + TYN ++  LC  G +R+
Sbjct: 269 NGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMRE 328

Query: 357 ANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIH 416
              L++ M   K+ PD VT NTLI+   ++G +  A K+  +M   G+  +Q T+   + 
Sbjct: 329 GLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLK 388

Query: 417 GFCKAKEMDIAKELLFGMLDA-GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLC 475
             CK ++ +     +  ++D  GFSP   +Y  L+  Y    +    L+++ E   +G+ 
Sbjct: 389 WLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIK 448

Query: 476 VDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDI 535
           ++      ++   CK+ K+D A  L N     G + D V Y +L   ++R  + +   ++
Sbjct: 449 MNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEM 508

Query: 536 LDDMYRRRLMITLKIYRSF 554
            D+M + ++  T+  + S 
Sbjct: 509 WDEMKKVKITPTVSTFNSL 527



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 120/459 (26%), Positives = 214/459 (46%), Gaps = 15/459 (3%)

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           LV  Y  L   ++  Q+ + M+  N++P L    +L+N L          ++   M  L 
Sbjct: 281 LVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLK 340

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
           +  ++  YN LI  C +     +  KL+ +ME   V+A+  T+N  +   CK+    EA+
Sbjct: 341 LQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKR-EAV 399

Query: 256 A--VQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLID 311
              V++ ++  G SPDIVTY++LI  + + G +  A  + R++  KG   N +T  T++D
Sbjct: 400 TRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILD 459

Query: 312 GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAP 371
             C+   L+EA  L      +G     VTY +++    +E ++  A  + +EM + KI P
Sbjct: 460 ALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITP 519

Query: 372 DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
              T N+LI   C  G T  AM+  + + E+GL+ D  T+ ++I G+CK   ++ A E  
Sbjct: 520 TVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFY 579

Query: 432 FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
              +   F P   + + L++G C +   E  L   +  +     VD   Y  +I  FCK 
Sbjct: 580 NESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEERE-VDTVTYNTMISAFCKD 638

Query: 492 EKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRR--RLMITLK 549
           +K+  A  L + M+  G+  D   Y S        G+     ++L     +   +   L+
Sbjct: 639 KKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGKFGSMKRDLQ 698

Query: 550 IYRSFSASYAKDNEILD---LFWSHVVD----RGLMSKH 581
           +    + + ++  E L+   + +S V+D    RG + +H
Sbjct: 699 VETEKNPATSESKEELNTEAIAYSDVIDELCSRGRLKEH 737



 Score = 78.6 bits (192), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 57/251 (22%), Positives = 113/251 (45%), Gaps = 30/251 (11%)

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           L++ +   +  +  L+++D+M+   + P +     L+  L     T++  + + ++ + G
Sbjct: 492 LIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESG 551

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
           ++ +   +N +I   CK   V+K  +   E      + D +T N L+   CK+GM  +AL
Sbjct: 552 LLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKAL 611

Query: 256 AVQDRM--EREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLID 311
              + +  ERE    D VTYN++I  FC++ +++EA  L  ++  KG  P+  TY + I 
Sbjct: 612 NFFNTLIEERE---VDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFIS 668

Query: 312 GYCRANDLEEALRL------------REVMAAKGVYPGV-----------VTYNSILRKL 348
                  L E   L            R++       P             + Y+ ++ +L
Sbjct: 669 LLMEDGKLSETDELLKKFSGKFGSMKRDLQVETEKNPATSESKEELNTEAIAYSDVIDEL 728

Query: 349 CKEGRIRDANR 359
           C  GR+++ +R
Sbjct: 729 CSRGRLKEHSR 739


>gi|224137250|ref|XP_002327079.1| predicted protein [Populus trichocarpa]
 gi|222835394|gb|EEE73829.1| predicted protein [Populus trichocarpa]
          Length = 795

 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 139/479 (29%), Positives = 223/479 (46%), Gaps = 79/479 (16%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYN------- 204
           V+DQMR  +++P +  C +++N+  K    +   +  ++M +LG   N   YN       
Sbjct: 53  VYDQMRRLDIVPDVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYV 112

Query: 205 ----------------------------VLIHACCKSSDVDKVEKLLCEMEFKD-VRADL 235
                                       +LI   CK   V++ EK+L EME +D V  D 
Sbjct: 113 SLGDIEGAKGVLKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDE 172

Query: 236 FTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR- 294
           + Y  LI  YCK G   +A+ V+D M + G+  ++   NSLI+G+C+ G++ E  RL   
Sbjct: 173 YAYGALIDGYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMC 232

Query: 295 ----DIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
               D+K   P+  +Y TL+DGYCR     +A  + + M  KG+ P VVTYN++L+ LC+
Sbjct: 233 MRKLDLK---PDSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCR 289

Query: 351 EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
            G  +DA RL + M ++ + P+ V   TL++   K+GD + A+ + + +L  G+    + 
Sbjct: 290 FGDYKDALRLWHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYA 349

Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNN-EEA-------- 461
           +  +I+G CK  EMD AKE    M + G  P   +Y  L DGYC   N EEA        
Sbjct: 350 FNTMINGLCKMGEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKME 409

Query: 462 --------------------------LLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVD 495
                                     L+ LL E  +RGL  +V  Y ALI  +C + ++D
Sbjct: 410 KEEIFPSIEMYNSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLD 469

Query: 496 YAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSF 554
            A   +  M G G   + +I + +  + +R G     + +L  M    L++  +    F
Sbjct: 470 KAFSAYFEMIGKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVDFDLVLDHRCLEDF 528



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 112/391 (28%), Positives = 198/391 (50%), Gaps = 3/391 (0%)

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
           YA   M ++ L VFD M  +   P L +C  LL++L K   +     VY +M +L +V +
Sbjct: 6   YAEKGMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRLDIVPD 65

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
           +    ++++A CK+  V++  + + EME      +  +YN+L+  Y   G    A  V  
Sbjct: 66  VFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGAKGVLK 125

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK---GATPNHVTYTTLIDGYCRA 316
            M  +G+  + VT   LI G+C++ ++ EA ++ R+++   G   +   Y  LIDGYC+ 
Sbjct: 126 FMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALIDGYCKV 185

Query: 317 NDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTC 376
             + +A+R+R+ M   G+   +   NS++   CK G++ +  RLL  M +  + PD+ + 
Sbjct: 186 GKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKPDSYSY 245

Query: 377 NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD 436
            TL++ YC+ G ++ A  V ++ML  G+     TY  L+ G C+  +   A  L   ML 
Sbjct: 246 CTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHLMLQ 305

Query: 437 AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDY 496
            G +P+   Y  L+DG     +    L L D+ ++RG+   +  +  +I   CK  ++D 
Sbjct: 306 RGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGLCKMGEMDG 365

Query: 497 AQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
           A+  F  M+  G   D + Y +L+  Y + G
Sbjct: 366 AKETFKRMEELGCKPDGITYRTLSDGYCKVG 396



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 118/508 (23%), Positives = 217/508 (42%), Gaps = 72/508 (14%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N  V + L+  Y       +G ++   MR  +L P  ++   L++   +D L+   + V 
Sbjct: 206 NLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKPDSYSYCTLVDGYCRDGLSSKAFNVC 265

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
            +M++ G+   +  YN L+   C+  D     +L   M  + V  +   Y TL+    K 
Sbjct: 266 DQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHLMLQRGVTPNEVGYCTLLDGLFKM 325

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTY 306
           G    AL + D +   GI+  I  +N++I+G C+ G M  A+  F+ ++  G  P+ +TY
Sbjct: 326 GDFSRALTLWDDILARGINKSIYAFNTMINGLCKMGEMDGAKETFKRMEELGCKPDGITY 385

Query: 307 TTLIDGYCRANDLEEA-----------------------------------LRLREVMAA 331
            TL DGYC+  ++EEA                                   + L   M  
Sbjct: 386 RTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFTSKKISKLIDLLAEMDT 445

Query: 332 KGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTAS 391
           +G+ P VVTY +++   C +GR+  A     EM  K  AP+ + C+ ++++  ++G    
Sbjct: 446 RGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVIICSKIVSSLYRLGRIDE 505

Query: 392 AMKVKNRMLEAGLMLDQ-----------------------------------FTYKALIH 416
           A  +  +M++  L+LD                                      Y   + 
Sbjct: 506 ANMLLQKMVDFDLVLDHRCLEDFQNADIRKLDCWKIADTLDESAIKFSLPNNVVYNIAMA 565

Query: 417 GFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCV 476
           G CK+ +++ A+    G+    F+P   +Y  L+ G+           L DE V++GL  
Sbjct: 566 GLCKSGKVNDARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYVNEAFNLRDEMVNKGLVP 625

Query: 477 DVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDIL 536
           +++ Y AL+   CK   +D A+RLF+ +   G++ + V Y  L   Y ++G P+   D+ 
Sbjct: 626 NITTYNALLNGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNILIDGYCKSGSPREALDLR 685

Query: 537 DDMYRRRLMITLKIYRSFSASYAKDNEI 564
             M +  +  ++  Y S    + K +++
Sbjct: 686 GKMLKEGISPSIITYSSLINGFCKQSDV 713



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 113/466 (24%), Positives = 199/466 (42%), Gaps = 72/466 (15%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           +D L+++  M    + P+      LL+ L K         ++  ++  G+  +I+ +N +
Sbjct: 294 KDALRLWHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTM 353

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD------- 259
           I+  CK  ++D  ++    ME    + D  TY TL   YCK G   EA  +++       
Sbjct: 354 INGLCKMGEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEI 413

Query: 260 ----------------------------RMEREGISPDIVTYNSLIHGFCREGRMREARR 291
                                        M+  G+SP++VTY +LI G+C +GR+ +A  
Sbjct: 414 FPSIEMYNSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFS 473

Query: 292 LFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVM-------------------- 329
            + ++  KG  PN +  + ++    R   ++EA  L + M                    
Sbjct: 474 AYFEMIGKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVDFDLVLDHRCLEDFQNADI 533

Query: 330 ---------------AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNV 374
                          A K   P  V YN  +  LCK G++ DA R    ++     PDN 
Sbjct: 534 RKLDCWKIADTLDESAIKFSLPNNVVYNIAMAGLCKSGKVNDARRFFLGLSHGSFTPDNF 593

Query: 375 TCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGM 434
           T  TLI+ +   G    A  +++ M+  GL+ +  TY AL++G CK+  +D A+ L   +
Sbjct: 594 TYCTLIHGFSAAGYVNEAFNLRDEMVNKGLVPNITTYNALLNGLCKSGYLDRARRLFDKL 653

Query: 435 LDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKV 494
              G  P+  +Y+ L+DGYC   +    L L  + +  G+   +  Y +LI  FCK+  V
Sbjct: 654 HLKGLIPNVVTYNILIDGYCKSGSPREALDLRGKMLKEGISPSIITYSSLINGFCKQSDV 713

Query: 495 DYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMY 540
           + A +L N M+ + +      ++ L     + G+ K  S + + M+
Sbjct: 714 EEAMKLLNEMKASNVDQTIATFSKLVEGCIQHGDVKKMSKLHNMMH 759



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 57/222 (25%), Positives = 115/222 (51%), Gaps = 1/222 (0%)

Query: 344 ILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAG 403
           IL+   ++G +++A  + + M +    P   +CN+L++   K G++ SA+ V ++M    
Sbjct: 2   ILKVYAEKGMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRLD 61

Query: 404 LMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALL 463
           ++ D FT   +++ +CKA +++ A E +  M   GF  +  SY+ LVDGY +  + E   
Sbjct: 62  IVPDVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGAK 121

Query: 464 KLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQG-NGILGDSVIYTSLAYA 522
            +L     +G+  +      LI+ +CK+ KV+ A+++   M+  +G++ D   Y +L   
Sbjct: 122 GVLKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALIDG 181

Query: 523 YWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
           Y + G+      + D+M +  L + L +  S    Y K+ ++
Sbjct: 182 YCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQV 223



 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 75/149 (50%)

Query: 154 DQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKS 213
           D+M    L+P++     LLN L K    D   +++ K+   G++ N+  YN+LI   CKS
Sbjct: 616 DEMVNKGLVPNITTYNALLNGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNILIDGYCKS 675

Query: 214 SDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTY 273
               +   L  +M  + +   + TY++LI  +CK+    EA+ + + M+   +   I T+
Sbjct: 676 GSPREALDLRGKMLKEGISPSIITYSSLINGFCKQSDVEEAMKLLNEMKASNVDQTIATF 735

Query: 274 NSLIHGFCREGRMREARRLFRDIKGATPN 302
           + L+ G  + G +++  +L   +  A P+
Sbjct: 736 SKLVEGCIQHGDVKKMSKLHNMMHMACPS 764


>gi|357499275|ref|XP_003619926.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494941|gb|AES76144.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 727

 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 119/397 (29%), Positives = 192/397 (48%), Gaps = 14/397 (3%)

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
           V  N+ +Y+++I   C++  VD+  +   EM    V  + FTY +LI   C  G   E  
Sbjct: 181 VKGNVVMYSIVIDCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGF 240

Query: 256 AVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGY 313
            + D M R G+   +  +  LI G C+ G + EAR +F ++  +G  PN VT T L+ GY
Sbjct: 241 GLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGY 300

Query: 314 CRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDN 373
           C   +++ A  L + +   G    V TYN  +   CK GR+RDA R+ +EM  + + P+ 
Sbjct: 301 CLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNI 360

Query: 374 VTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFG 433
           VT N+LI+  CK G+ + A ++   M  +GL  D  T   L+ G CK+K +D A  L   
Sbjct: 361 VTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQ 420

Query: 434 MLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEK 493
           ++++G +P   SY+ L+ G C        + LL +   + L   +  Y  LI   C+  +
Sbjct: 421 LVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGR 480

Query: 494 VDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRS 553
           +  A RL N M   G L D++ Y+ L  A W+         + + M +R L   +  Y  
Sbjct: 481 ISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTI 540

Query: 554 FSASYAKDNEILDLFWSHVVDRGLMSKHIFKEMQLRN 590
               Y K         S  +D  +   ++F+EM ++N
Sbjct: 541 MIDGYCK---------SERIDEAI---NLFREMHMKN 565



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 117/385 (30%), Positives = 190/385 (49%), Gaps = 2/385 (0%)

Query: 169 TVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEF 228
           +++++ L ++   D  ++ Y +M+  GV  N   Y  LI   C      +   L+ EM  
Sbjct: 189 SIVIDCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIR 248

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
           + +   ++ +  LI   CK GM  EA  + D M   G  P+IVT  +L+ G+C +G +  
Sbjct: 249 RGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDM 308

Query: 289 ARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILR 346
           AR LF  I   G   +  TY   I GYC+   + +A+R+ + M  +GV P +VTYNS++ 
Sbjct: 309 ARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLID 368

Query: 347 KLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLML 406
            LCK G +  A  ++  M+   + PD VTC  L++  CK      A+ + N+++E+GL  
Sbjct: 369 CLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTP 428

Query: 407 DQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLL 466
           D ++Y  LIHG C ++ M  A  LL  M      P   +YS L+DG C         +LL
Sbjct: 429 DVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLL 488

Query: 467 DEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRA 526
           +E   +G   D   Y  L+    KK+ +D A  LFN M   G+  D + YT +   Y ++
Sbjct: 489 NEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKS 548

Query: 527 GEPKACSDILDDMYRRRLMITLKIY 551
                  ++  +M+ + L+  +  Y
Sbjct: 549 ERIDEAINLFREMHMKNLVPDIVTY 573



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 112/385 (29%), Positives = 189/385 (49%), Gaps = 2/385 (0%)

Query: 145 MTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYN 204
              +G + +++M  + + P+      L+  L         + +  +M++ G+  +++++ 
Sbjct: 200 FVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFT 259

Query: 205 VLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMERE 264
           VLI   CK+  + +  ++  EM  +    ++ T   L+  YC KG    A  + D +   
Sbjct: 260 VLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEW 319

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEA 322
           G   D+ TYN  IHG+C+ GR+R+A R+F ++  +G  PN VTY +LID  C+A ++  A
Sbjct: 320 GFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGA 379

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
             + + M   G+ P +VT   +L  LCK  R+  A  L N++ E  + PD  +   LI+ 
Sbjct: 380 WEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHG 439

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
            C       AM +   M    L+    TY  LI G C++  +  A  LL  M   G  P 
Sbjct: 440 CCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPD 499

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +YS L+D    K + +  + L ++ + RGL  DV  Y  +I  +CK E++D A  LF 
Sbjct: 500 TITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFR 559

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAG 527
            M    ++ D V YT L  A +++G
Sbjct: 560 EMHMKNLVPDIVTYTILFNAVFKSG 584



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 106/360 (29%), Positives = 175/360 (48%), Gaps = 2/360 (0%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           +G  + D+M    L   ++  TVL++ L K+ +     +++ +MV  G   NI     L+
Sbjct: 238 EGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALM 297

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
              C   +VD   +L   +     + D++TYN  I  YCK G   +A+ V D M REG+ 
Sbjct: 298 GGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVV 357

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
           P+IVTYNSLI   C+ G +  A  + + +   G TP+ VT   L+DG C++  L++A+ L
Sbjct: 358 PNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILL 417

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
              +   G+ P V +Y  ++   C   R+ +A  LL +M+ K + P  VT + LI+  C+
Sbjct: 418 FNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCR 477

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            G  ++A ++ N M   G + D  TY  L+    K + +D A  L   M+  G  P    
Sbjct: 478 SGRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMC 537

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+ ++DGYC     +  + L  E   + L  D+  Y  L     K     Y  +  N+++
Sbjct: 538 YTIMIDGYCKSERIDEAINLFREMHMKNLVPDIVTYTILFNAVFKSGSNSYEWKFVNVIR 597



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 114/372 (30%), Positives = 182/372 (48%), Gaps = 5/372 (1%)

Query: 127 DGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWK 186
           D + +V + L+       M  +  ++FD+M      P++  CT L+         DM  +
Sbjct: 252 DVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARE 311

Query: 187 VYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYC 246
           ++  + + G   ++  YNV IH  CK   V    ++  EM  + V  ++ TYN+LI   C
Sbjct: 312 LFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLC 371

Query: 247 KKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHV 304
           K G    A  +   M R G++PDIVT   L+ G C+  R+ +A  LF  +   G TP+  
Sbjct: 372 KAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVW 431

Query: 305 TYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM 364
           +YT LI G C +  + EA+ L   M  K + P +VTY+ ++  LC+ GRI +A RLLNEM
Sbjct: 432 SYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEM 491

Query: 365 NEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEM 424
           + K   PD +T + L++A  K      A+ + N+M++ GL  D   Y  +I G+CK++ +
Sbjct: 492 HVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERI 551

Query: 425 DIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRAL 484
           D A  L   M      P   +Y+ L +      +     K ++  V R +     V + L
Sbjct: 552 DEAINLFREMHMKNLVPDIVTYTILFNAVFKSGSNSYEWKFVN--VIRDINPPPRVLKYL 609

Query: 485 IRRFCKKEKVDY 496
               CK E +DY
Sbjct: 610 -AALCKSEHLDY 620



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 93/376 (24%), Positives = 148/376 (39%), Gaps = 45/376 (11%)

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           D    NT++   C  G   +AL   D +   G S + V+Y  LI+G C  GR+ EA  L 
Sbjct: 106 DTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSYGILINGLCENGRVNEAVNLL 165

Query: 294 RDI---------------------------------------------KGATPNHVTYTT 308
           R I                                              G  PN  TY +
Sbjct: 166 RMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGS 225

Query: 309 LIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKK 368
           LI G C      E   L + M  +G+   V  +  ++  LCK G + +A  + +EM  + 
Sbjct: 226 LIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRG 285

Query: 369 IAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAK 428
             P+ VTC  L+  YC  G+   A ++ + + E G   D +TY   IHG+CK   +  A 
Sbjct: 286 YEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAV 345

Query: 429 ELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRF 488
            +   M   G  P+  +Y+ L+D  C         +++      GL  D+     L+   
Sbjct: 346 RVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGL 405

Query: 489 CKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITL 548
           CK +++D A  LFN +  +G+  D   YT L +    +       ++L DM+ + L+  +
Sbjct: 406 CKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHI 465

Query: 549 KIYRSFSASYAKDNEI 564
             Y        +   I
Sbjct: 466 VTYSCLIDGLCRSGRI 481



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/276 (21%), Positives = 103/276 (37%), Gaps = 43/276 (15%)

Query: 332 KGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTAS 391
           +G     V  N++L+ LC  G +  A    +E+     + + V+   LIN  C+ G    
Sbjct: 101 RGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSYGILINGLCENGRVNE 160

Query: 392 AMKV-------------------------------------------KNRMLEAGLMLDQ 408
           A+ +                                            N M+  G+  ++
Sbjct: 161 AVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFEFYNEMMGNGVCPNE 220

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
           FTY +LI G C   +      L+  M+  G   S   ++ L+DG C         ++ DE
Sbjct: 221 FTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDE 280

Query: 469 FVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
            V+RG   ++    AL+  +C K  VD A+ LF+ +   G   D   Y    + Y + G 
Sbjct: 281 MVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGR 340

Query: 529 PKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
            +    + D+M R  ++  +  Y S      K  E+
Sbjct: 341 VRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEV 376



 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 55/258 (21%), Positives = 94/258 (36%), Gaps = 43/258 (16%)

Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
           G +  +  +  ++ ++    D V  NT++   C  G    A++  + ++  G  L++ +Y
Sbjct: 86  GHVSFSFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSY 145

Query: 412 KALIHGFCKAKEMDIAKELLF--------------------------------GMLDAGF 439
             LI+G C+   ++ A  LL                                 G +D GF
Sbjct: 146 GILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGF 205

Query: 440 S-----------PSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRF 488
                       P+  +Y  L+ G C          L+DE + RGL V V V+  LI   
Sbjct: 206 EFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGL 265

Query: 489 CKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITL 548
           CK   +  A+ +F+ M   G   + V  T+L   Y   G      ++ D +        +
Sbjct: 266 CKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDV 325

Query: 549 KIYRSFSASYAKDNEILD 566
             Y  F   Y K   + D
Sbjct: 326 WTYNVFIHGYCKVGRVRD 343


>gi|218188645|gb|EEC71072.1| hypothetical protein OsI_02831 [Oryza sativa Indica Group]
          Length = 800

 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 123/439 (28%), Positives = 215/439 (48%), Gaps = 5/439 (1%)

Query: 145 MTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYN 204
           M +   ++  QMR H L+P  +   +++  L  D+L      ++K+M   G+  +   YN
Sbjct: 332 MPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYN 390

Query: 205 VLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMERE 264
           +LIH  C+   + +   L  +M    V+  + TY++L+  YC  G   EA+ +   M  +
Sbjct: 391 ILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGK 450

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           G +P++VTY +L+ G   +    +A  L  ++K  G + N  TY TLI+G C    + E 
Sbjct: 451 GFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEV 510

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
             + +    +G  P  +TYNSI+    K G +  A  +  +M  K I P+ VT  + I+ 
Sbjct: 511 GEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDG 570

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           YCK      A+K+ N +   GL  D   Y +LI+GFC+   M  A ++L  ML  G  P+
Sbjct: 571 YCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPN 630

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
              Y+  + GY N    E  L+  ++ +  G+ +D + Y  LI  F K   V +A +L++
Sbjct: 631 ISVYNSFITGYKNLKMMEEALRFYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYS 690

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDN 562
            M   G + D + +T+L +   R G+      +LD+M R  +   + +Y      Y ++ 
Sbjct: 691 EMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNG 750

Query: 563 EILDLFWSH--VVDRGLMS 579
           ++ + F  H  +++R +M 
Sbjct: 751 KLQEAFRLHDEMLERKIMP 769



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 113/375 (30%), Positives = 183/375 (48%), Gaps = 2/375 (0%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           ++ L ++++M    + P++     LL     +   D   K+Y +M   G   N+  Y  L
Sbjct: 403 REALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTL 462

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           +      +  DK   LL EM+   V  + +TYNTLI   C  G   E   +  R E EG 
Sbjct: 463 MKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGF 522

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
            P  +TYNS+I+GF + G M  A  +++ +  KG  PN VTYT+ IDGYC+ +  + AL+
Sbjct: 523 VPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALK 582

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           +   +  KG+ P +  YNS++   C+EG +  A ++L  M +  + P+    N+ I  Y 
Sbjct: 583 MLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYK 642

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
            +     A++   +M++ G+ LD  TY  LI GF K   +  A +L   M+  G  P + 
Sbjct: 643 NLKMMEEALRFYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHI 702

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
           +++ L  G C   + +   KLLDE     +  +V +Y  LI  + +  K+  A RL + M
Sbjct: 703 TFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEM 762

Query: 505 QGNGILGDSVIYTSL 519
               I+ D   Y  L
Sbjct: 763 LERKIMPDDTTYDIL 777



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 116/426 (27%), Positives = 203/426 (47%), Gaps = 25/426 (5%)

Query: 63  FFKWAESAVPN-YKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVK 121
           F + A+S +P+ + +++  HW     L + +  + A N+ EK      ++   V   +V 
Sbjct: 375 FKEMADSGIPDAFTYNILIHW-----LCQRRKIREALNLWEK------MNETGVKPYIVT 423

Query: 122 IHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLT 181
            H          S L+ +  N  M  + ++++ +M      P++   T L+         
Sbjct: 424 YH----------SLLLCYCVNGCM-DEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAF 472

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
           D  + +  +M Q GV  N + YN LI+  C    V +V ++L   E +       TYN++
Sbjct: 473 DKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSI 532

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGA 299
           I  + K GM   A AV  +M  +GI P+IVTY S I G+C+      A ++  D+  KG 
Sbjct: 533 INGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGL 592

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
            P+   Y +LI G+C+  ++  AL++  +M   G+ P +  YNS +        + +A R
Sbjct: 593 RPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALR 652

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
              +M ++ I  D  T  TLI+ + K G+   A+K+ + M+  G + D  T+ AL HG C
Sbjct: 653 FYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLC 712

Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
           +  ++D A++LL  M      P+   Y+ L++GY      +   +L DE + R +  D +
Sbjct: 713 RNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDT 772

Query: 480 VYRALI 485
            Y  L+
Sbjct: 773 TYDILV 778



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 135/533 (25%), Positives = 219/533 (41%), Gaps = 78/533 (14%)

Query: 128 GNSHVL-SWL--VIFYANLK--MTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTD 182
           G  H L +W+  V+  A  K  M  D +++FD+M    + P    C+V + SL K R  +
Sbjct: 170 GKGHPLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDAN 229

Query: 183 MVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLI 242
               V +KM   G V     +N ++    K   +++   +  E+     +  +    TL+
Sbjct: 230 RALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLM 289

Query: 243 ALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD------- 295
             YC +    +AL + +   R+G+ P  VTY  LI G   EG   +A  L R        
Sbjct: 290 HGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLL 349

Query: 296 ---------IKG--------------------ATPNHVTYTTLIDGYCRANDLEEALRLR 326
                    IKG                      P+  TY  LI   C+   + EAL L 
Sbjct: 350 PSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGIPDAFTYNILIHWLCQRRKIREALNLW 409

Query: 327 EVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVT----------- 375
           E M   GV P +VTY+S+L   C  G + +A +L  EM  K   P+ VT           
Sbjct: 410 EKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINK 469

Query: 376 -------------------C-----NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
                              C     NTLIN  C +G      ++  R    G +    TY
Sbjct: 470 AAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTY 529

Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
            ++I+GF KA  M  A  +   M   G  P+  +Y+  +DGYC  +  +  LK+L++   
Sbjct: 530 NSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRC 589

Query: 472 RGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKA 531
           +GL  D++ Y +LI  FC++  + +A ++  LM  +G+L +  +Y S    Y      + 
Sbjct: 590 KGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEE 649

Query: 532 CSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDL--FWSHVVDRGLMSKHI 582
                + M +  + +    Y +    ++KD  +      +S +V +G +  HI
Sbjct: 650 ALRFYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHI 702



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 88/373 (23%), Positives = 145/373 (38%), Gaps = 38/373 (10%)

Query: 225 EMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI-------------- 270
           EM  K    D + ++ ++    K+GM+ +A+ + D M    I PD               
Sbjct: 167 EMRGKGHPLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLR 226

Query: 271 ---------------------VTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYT 307
                                 T+NS++    + GRM EA  +  ++   G   + V  T
Sbjct: 227 DANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLAT 286

Query: 308 TLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEK 367
           TL+ GYC   ++ +AL + E     G+ P  VTY  ++R   +EG    A  L  +M + 
Sbjct: 287 TLMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDH 346

Query: 368 KIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIA 427
            + P     N +I           A+ +   M ++G+  D FTY  LIH  C+ +++  A
Sbjct: 347 GLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGIP-DAFTYNILIHWLCQRRKIREA 405

Query: 428 KELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRR 487
             L   M + G  P   +Y  L+  YC     +  +KL  E   +G   +V  Y  L++ 
Sbjct: 406 LNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKG 465

Query: 488 FCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMIT 547
              K   D A  L   M+ NG+  +   Y +L       G      ++L        + T
Sbjct: 466 HINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPT 525

Query: 548 LKIYRSFSASYAK 560
              Y S    + K
Sbjct: 526 AMTYNSIINGFIK 538



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 79/304 (25%), Positives = 128/304 (42%), Gaps = 3/304 (0%)

Query: 226 MEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGR 285
           ME + V  D  +   L+A+  +     +ALA+   M  +G   D   ++ ++    +EG 
Sbjct: 133 MEARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGHPLDAWMFDVVMRACFKEGM 192

Query: 286 MREARRLFRDIKGA--TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNS 343
             +A RLF ++  +   P+    +  I   C+  D   AL +   M   G  P   T+NS
Sbjct: 193 YDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNS 252

Query: 344 ILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAG 403
           ++  L K GR+ +A  + +E+         V   TL++ YC   +   A+ +    L  G
Sbjct: 253 VVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDG 312

Query: 404 LMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALL 463
           L+    TY  LI G  +    + A EL   M D G  PS   ++ ++ G  N    +  +
Sbjct: 313 LVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAV 372

Query: 464 KLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAY 523
            L  E    G+  D   Y  LI   C++ K+  A  L+  M   G+    V Y SL   Y
Sbjct: 373 SLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCY 431

Query: 524 WRAG 527
              G
Sbjct: 432 CVNG 435


>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
          Length = 746

 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 121/406 (29%), Positives = 198/406 (48%), Gaps = 37/406 (9%)

Query: 171 LLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKD 230
           LLN L +     ++  VY +M + G+  ++  +N L+ A C++  V     +L EM    
Sbjct: 156 LLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSG 215

Query: 231 VRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREAR 290
           V  D  T+ TL+  + ++G    AL V+ RM   G SP  VT N LI+G+C+ GR+ +A 
Sbjct: 216 VAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDAL 275

Query: 291 RLFRD--IKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
              +     G  P+ +TY T ++G C+   +  AL++ +VM  +G  P V TYN ++  L
Sbjct: 276 GYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCL 335

Query: 349 CKEGRIRDANRLLNEMNE-----------------------------------KKIAPDN 373
           CK G++ +A  +LN+M E                                   K ++PD 
Sbjct: 336 CKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDV 395

Query: 374 VTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFG 433
            T N LINA CK+GD   A+++   M  +G   D+ TY  LI   C   ++  A +LL  
Sbjct: 396 YTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKE 455

Query: 434 MLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEK 493
           M  AG   S  +Y+ ++DG C K   E   ++ D+   +G+  +   +  LI   CK ++
Sbjct: 456 MESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKR 515

Query: 494 VDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
           +D A +L + M   G+  +++ Y S+   Y + G+ K  +DIL  M
Sbjct: 516 IDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTM 561



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 120/417 (28%), Positives = 192/417 (46%), Gaps = 2/417 (0%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           + ++M    + P     T L+    ++       +V  +M+++G        NVLI+  C
Sbjct: 207 MLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYC 266

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           K   V+     + +        D  TYNT +   C+ G    AL V D M +EG  PD+ 
Sbjct: 267 KLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVF 326

Query: 272 TYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           TYN +++  C+ G++ EA+ +   +  +G  P+  T+ TLI   C  N LEEAL L   +
Sbjct: 327 TYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQV 386

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
             KG+ P V T+N ++  LCK G  + A RL  EM      PD VT NTLI+  C +G  
Sbjct: 387 TLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKL 446

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
             A+ +   M  AG      TY  +I G CK   ++ A+E+   M   G S +  +++ L
Sbjct: 447 GKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTL 506

Query: 450 VDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGI 509
           +DG C     +   +L+ + +S GL  +   Y +++  +CK+  +  A  +   M  NG 
Sbjct: 507 IDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGF 566

Query: 510 LGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
             D V Y +L     +AG  +    +L  M  + +  T K Y     S  + N   D
Sbjct: 567 EVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRD 623



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 106/343 (30%), Positives = 181/343 (52%), Gaps = 2/343 (0%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           L+V D M      P +    +++N L K+   +    +  +MV+ G + +I  +N LI A
Sbjct: 310 LKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVA 369

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
            C  + +++   L  ++  K +  D++T+N LI   CK G    AL + + M+  G +PD
Sbjct: 370 LCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPD 429

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLRE 327
            VTYN+LI   C  G++ +A  L ++++  G   + VTY T+IDG C+   +EEA  + +
Sbjct: 430 EVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFD 489

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
            M  +G+    +T+N+++  LCK+ RI DAN+L+++M  + + P+N+T N+++  YCK G
Sbjct: 490 QMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQG 549

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
           D   A  +   M   G  +D  TY  LI+G CKA    +A +LL GM   G   +  +Y+
Sbjct: 550 DIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYN 609

Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCK 490
            ++     +NN    + L  E    G   D   Y+ + R  C+
Sbjct: 610 PVIQSLFRRNNTRDAMNLFREMTEVGEPPDAFTYKIVFRGLCR 652



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 116/397 (29%), Positives = 195/397 (49%), Gaps = 2/397 (0%)

Query: 133 LSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMV 192
           ++ L+  Y  L   +D L    Q   +   P        +N L ++       KV   MV
Sbjct: 258 VNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMV 317

Query: 193 QLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHY 252
           Q G   ++  YN++++  CK+  +++ + +L +M  +    D+ T+NTLI   C      
Sbjct: 318 QEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLE 377

Query: 253 EALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLI 310
           EAL +  ++  +G+SPD+ T+N LI+  C+ G  + A RLF ++K  G TP+ VTY TLI
Sbjct: 378 EALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLI 437

Query: 311 DGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIA 370
           D  C    L +AL L + M + G     VTYN+I+  LCK+ RI +A  + ++M+ + I+
Sbjct: 438 DNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGIS 497

Query: 371 PDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL 430
            + +T NTLI+  CK      A ++ ++M+  GL  +  TY +++  +CK  ++  A ++
Sbjct: 498 RNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADI 557

Query: 431 LFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCK 490
           L  M   GF     +Y  L++G C     +  LKLL     +G+      Y  +I+   +
Sbjct: 558 LQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFR 617

Query: 491 KEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
           +     A  LF  M   G   D+  Y  +     R G
Sbjct: 618 RNNTRDAMNLFREMTEVGEPPDAFTYKIVFRGLCRGG 654



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 123/419 (29%), Positives = 196/419 (46%), Gaps = 25/419 (5%)

Query: 163 PHLHACTVLLNSLAK-DRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEK 221
           P      VL+N   K  R+ D +  + +++   G   +   YN  ++  C++  V    K
Sbjct: 253 PTKVTVNVLINGYCKLGRVEDALGYIQQEIAN-GFEPDQITYNTFVNGLCQNGHVGHALK 311

Query: 222 LLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFC 281
           ++  M  +    D+FTYN ++   CK G   EA  + ++M   G  PDI T+N+LI   C
Sbjct: 312 VMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALC 371

Query: 282 REGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVV 339
              R+ EA  L R +  KG +P+  T+  LI+  C+  D + ALRL E M + G  P  V
Sbjct: 372 SGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEV 431

Query: 340 TYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRM 399
           TYN+++  LC  G++  A  LL EM         VT NT+I+  CK      A +V ++M
Sbjct: 432 TYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQM 491

Query: 400 LEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNE 459
              G+  +  T+  LI G CK K +D A +L+  M+  G  P+  +Y+ ++  YC + + 
Sbjct: 492 DLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDI 551

Query: 460 EALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
           +    +L    + G  VDV  Y  LI   CK  +   A +L   M+  G+          
Sbjct: 552 KKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGM---------- 601

Query: 520 AYAYWRAGEPKACSDILDDMYRR-RLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGL 577
                RA  PKA + ++  ++RR      + ++R  +       E  D F   +V RGL
Sbjct: 602 -----RA-TPKAYNPVIQSLFRRNNTRDAMNLFREMTEV----GEPPDAFTYKIVFRGL 650



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 114/416 (27%), Positives = 200/416 (48%), Gaps = 24/416 (5%)

Query: 80  SHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIF 139
           ++  +++ L KN   + A+ +L ++  R  L   +  N L+                 + 
Sbjct: 327 TYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLI-----------------VA 369

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
             +    ++ L +  Q+ +  L P ++   +L+N+L K     +  +++++M   G   +
Sbjct: 370 LCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPD 429

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
              YN LI   C    + K   LL EME         TYNT+I   CKK    EA  V D
Sbjct: 430 EVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFD 489

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRAN 317
           +M+ +GIS + +T+N+LI G C++ R+ +A +L   +  +G  PN++TY +++  YC+  
Sbjct: 490 QMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQG 549

Query: 318 DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCN 377
           D+++A  + + M A G    VVTY +++  LCK GR + A +LL  M  K +       N
Sbjct: 550 DIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYN 609

Query: 378 TLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAK-EMDIAKELLFGMLD 436
            +I +  +  +T  AM +   M E G   D FTYK +  G C+    +  A + L  M+D
Sbjct: 610 PVIQSLFRRNNTRDAMNLFREMTEVGEPPDAFTYKIVFRGLCRGGGSIREAFDFLLEMVD 669

Query: 437 AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLC--VDVSVYRAL--IRRF 488
            GF P + S+  L +G  N   ++  ++ ++  + +      DVS  R    IR+F
Sbjct: 670 KGFIPEFSSFRMLAEGLLNLGMDDYFIRAIEIIIEKADLGDSDVSAIRGYLKIRKF 725



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 59/238 (24%), Positives = 108/238 (45%), Gaps = 3/238 (1%)

Query: 333 GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
           G+    V YN +L  L +  +++    + +EM E+ I PD VT NTL+ A C+     +A
Sbjct: 145 GIQADTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTA 204

Query: 393 MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
           + +   M  +G+  D+ T+  L+ GF +   +  A  +   ML+ G SP+  + + L++G
Sbjct: 205 VLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLING 264

Query: 453 YCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGD 512
           YC     E  L  + + ++ G   D   Y   +   C+   V +A ++ ++M   G   D
Sbjct: 265 YCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPD 324

Query: 513 SVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDN---EILDL 567
              Y  +     + G+ +    IL+ M  R  +  +  + +   +    N   E LDL
Sbjct: 325 VFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDL 382



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 58/263 (22%), Positives = 102/263 (38%), Gaps = 39/263 (14%)

Query: 318 DLEEALR-LREVMAAKGVYPGVVTYNSILRKLC-----------------KEG-RIR--- 355
           D + ALR L   +A +   PG   Y  I+RKL                  +EG ++R   
Sbjct: 56  DPDAALRMLNAALAREDFAPGPEVYEEIIRKLGAAAGAADLMKVLVTEMRREGHQVRVGV 115

Query: 356 ---------------DA-NRLLNEMNEK-KIAPDNVTCNTLINAYCKIGDTASAMKVKNR 398
                          DA + +LN+++    I  D V  N L+N   +         V + 
Sbjct: 116 VHSFLESYARQQLFVDAVDLVLNQLDPLFGIQADTVVYNHLLNVLVEGSKMKLLETVYSE 175

Query: 399 MLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNN 458
           M E G+  D  T+  L+   C+A ++  A  +L  M  +G +P   +++ L+ G+  + +
Sbjct: 176 MGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGS 235

Query: 459 EEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTS 518
            +A L++    +  G          LI  +CK  +V+ A         NG   D + Y +
Sbjct: 236 IKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNT 295

Query: 519 LAYAYWRAGEPKACSDILDDMYR 541
                 + G       ++D M +
Sbjct: 296 FVNGLCQNGHVGHALKVMDVMVQ 318


>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
          Length = 716

 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 121/402 (30%), Positives = 196/402 (48%), Gaps = 37/402 (9%)

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
           P + A T +++   K+   +    ++K+MVQ G+  ++  Y+ ++HA CK+  + K E  
Sbjct: 221 PDVVAYTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAF 280

Query: 223 LCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR 282
           L +M  K V  D +TYN LI  Y   G   EA+ V   M R  I PD+VT N L+   C+
Sbjct: 281 LRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCK 340

Query: 283 EGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVT 340
            G+++EAR +F  +  KG  P+  +Y  +++GY     L +   L ++M   G+ P + T
Sbjct: 341 YGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYT 400

Query: 341 YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML 400
           ++ +++     G +  A  + NEM +  + PD VT  T+I A C+IG    AM+  N+M+
Sbjct: 401 FSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMI 460

Query: 401 EAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAG-------FS------------- 440
           + G+  D++ Y  LI GFC    +  AKEL+  +++ G       FS             
Sbjct: 461 DQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIM 520

Query: 441 ---------------PSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
                          P    YS L+DGYC     E  L++ D  VS G+  +V VY  L+
Sbjct: 521 DAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLV 580

Query: 486 RRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
             +CK  ++D    LF  M   GI   +++Y  +    + AG
Sbjct: 581 NGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAG 622



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 121/429 (28%), Positives = 205/429 (47%), Gaps = 16/429 (3%)

Query: 162 MPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVV--ANIHLYNVLIHACCKSSDVDKV 219
           +P + + ++LL SL     +     + + M + G V   ++  Y  +I    K  DV+K 
Sbjct: 183 VPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVIDCFFKEGDVNKA 242

Query: 220 EKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHG 279
             L  EM  + +  DL TY++++   CK     +A A   +M  +G+ PD  TYN+LI+G
Sbjct: 243 CDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYG 302

Query: 280 FCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPG 337
           +   G+ +EA R+F++++     P+ VT   L+   C+   ++EA  + + MA KG  P 
Sbjct: 303 YSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPD 362

Query: 338 VVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKN 397
           V +Y  +L     +G + D   L + M    IAPD  T + LI AY   G    AM + N
Sbjct: 363 VFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFN 422

Query: 398 RMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKN 457
            M + G+  D  TY  +I   C+  +MD A E    M+D G +P   +Y  L+ G+C   
Sbjct: 423 EMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHG 482

Query: 458 NEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYT 517
           +     +L+ E ++ G+ +D+  + ++I   CK  ++  AQ +F+L    G   D+V+Y+
Sbjct: 483 SLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYS 542

Query: 518 SLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGL 577
            L   Y   G+ +    + D M    +   + +Y +    Y K   I         D GL
Sbjct: 543 MLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRI---------DEGL 593

Query: 578 MSKHIFKEM 586
               +F+EM
Sbjct: 594 ---SLFREM 599



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 101/375 (26%), Positives = 186/375 (49%), Gaps = 9/375 (2%)

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLA-KDRLTDMVWKVYKKMVQLGVVA 198
           Y  +K  +D   VFD M +    P + +  ++LN  A K  L DM   ++  M+  G+  
Sbjct: 341 YGKIKEARD---VFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMT-DLFDLMLGDGIAP 396

Query: 199 NIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQ 258
           +I+ ++VLI A      +DK   +  EM    V+ D+ TY T+IA  C+ G   +A+   
Sbjct: 397 DIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKF 456

Query: 259 DRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRA 316
           ++M  +G++PD   Y+ LI GFC  G + +A+ L  +I   G   + V ++++I+  C+ 
Sbjct: 457 NQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKL 516

Query: 317 NDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTC 376
             + +A  + ++    G +P  V Y+ ++   C  G++  A R+ + M    I P+ V  
Sbjct: 517 GRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVY 576

Query: 377 NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD 436
            TL+N YCKIG     + +   ML+ G+      Y  +I G   A     AK     M +
Sbjct: 577 GTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTE 636

Query: 437 AGFSPSYCSYSWLVDGYC-NKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVD 495
           +G + + C+Y+ ++ G+  N+  +EA+  L  E  +  + +D+     +I    +  +V+
Sbjct: 637 SGIAINKCTYNIVLRGFFKNRCFDEAIF-LFKELRAMNVKIDIITLNTMIAGMFQTRRVE 695

Query: 496 YAQRLFNLMQGNGIL 510
            A+ LF  +  +G++
Sbjct: 696 EAKDLFASISRSGLV 710



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 94/333 (28%), Positives = 161/333 (48%), Gaps = 5/333 (1%)

Query: 201 HLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQ-D 259
           H Y +L+  C ++   +       ++    +R D+   N L+  +C+     EAL +   
Sbjct: 116 HTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDILLH 175

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GA--TPNHVTYTTLIDGYCR 315
           R    G  PD+ +Y+ L+   C +G+  +A  L R +   GA  +P+ V YTT+ID + +
Sbjct: 176 RTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVIDCFFK 235

Query: 316 ANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVT 375
             D+ +A  L + M  +G+ P +VTY+S++  LCK   +  A   L +M  K + PDN T
Sbjct: 236 EGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWT 295

Query: 376 CNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGML 435
            N LI  Y   G    A++V   M    ++ D  T   L+   CK  ++  A+++   M 
Sbjct: 296 YNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMA 355

Query: 436 DAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVD 495
             G +P   SY  +++GY  K     +  L D  +  G+  D+  +  LI+ +     +D
Sbjct: 356 MKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLD 415

Query: 496 YAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
            A  +FN M+ +G+  D V YT++  A  R G+
Sbjct: 416 KAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGK 448



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 87/313 (27%), Positives = 152/313 (48%), Gaps = 2/313 (0%)

Query: 131 HVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKK 190
           +  S L+  YAN  M    + +F++MR H + P +   T ++ +L +    D   + + +
Sbjct: 399 YTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQ 458

Query: 191 MVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGM 250
           M+  GV  + + Y+ LI   C    + K ++L+ E+    +R D+  ++++I   CK G 
Sbjct: 459 MIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGR 518

Query: 251 HYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTT 308
             +A  + D     G  PD V Y+ L+ G+C  G+M +A R+F  +   G  PN V Y T
Sbjct: 519 IMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGT 578

Query: 309 LIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKK 368
           L++GYC+   ++E L L   M  KG+ P  + YN I+  L   GR   A    +EM E  
Sbjct: 579 LVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESG 638

Query: 369 IAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAK 428
           IA +  T N ++  + K      A+ +   +    + +D  T   +I G  + + ++ AK
Sbjct: 639 IAINKCTYNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAK 698

Query: 429 ELLFGMLDAGFSP 441
           +L   +  +G  P
Sbjct: 699 DLFASISRSGLVP 711



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 71/278 (25%), Positives = 114/278 (41%), Gaps = 38/278 (13%)

Query: 300 TPNHVTYTTLID-----------------------------------GYCRANDLEEALR 324
           +P   TY  L+D                                   G+C A   +EAL 
Sbjct: 112 SPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALD 171

Query: 325 -LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI--APDNVTCNTLIN 381
            L       G  P V +Y+ +L+ LC +G+   A+ LL  M E     +PD V   T+I+
Sbjct: 172 ILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVID 231

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
            + K GD   A  +   M++ G+  D  TY +++H  CKA+ M  A+  L  M++ G  P
Sbjct: 232 CFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLP 291

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
              +Y+ L+ GY +    +  +++  E     +  DV     L+   CK  K+  A+ +F
Sbjct: 292 DNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVF 351

Query: 502 NLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
           + M   G   D   Y  +   Y   G     +D+ D M
Sbjct: 352 DTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLM 389



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 49/218 (22%), Positives = 83/218 (38%), Gaps = 41/218 (18%)

Query: 392 AMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLF------------------- 432
           A+    ++L  GL +D      L+ GFC+AK  D A ++L                    
Sbjct: 134 ALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILL 193

Query: 433 -GMLDAG------------------FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
             + D G                   SP   +Y+ ++D +  + +      L  E V RG
Sbjct: 194 KSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVIDCFFKEGDVNKACDLFKEMVQRG 253

Query: 474 LCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACS 533
           +  D+  Y +++   CK   +  A+     M   G+L D+  Y +L Y Y   G+ K   
Sbjct: 254 IPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAV 313

Query: 534 DILDDMYRRRLM---ITLKIYRSFSASYAKDNEILDLF 568
            +  +M R  ++   +TL +       Y K  E  D+F
Sbjct: 314 RVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVF 351


>gi|414880311|tpg|DAA57442.1| TPA: hypothetical protein ZEAMMB73_673693 [Zea mays]
          Length = 770

 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 123/453 (27%), Positives = 206/453 (45%), Gaps = 39/453 (8%)

Query: 153 FDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVA-NIHLYNVLIHACC 211
           F ++      P +  C +L+ +L      D+  KV+ +M     VA +++ Y V+I A C
Sbjct: 168 FLELSTRGASPSIKTCNILVEALGCGGQLDLARKVFGEMRDGNAVAPDVYTYTVMIKALC 227

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           ++ ++D    +L E+E   ++  + TYN L+   C+ G   EA  ++ RM    + P IV
Sbjct: 228 RAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMVEGRLRPSIV 287

Query: 272 TYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           T+  LI+G  R  R  E   + ++++  G TPN V Y  LI  +CR     EALRL + M
Sbjct: 288 TFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCSEALRLFDEM 347

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDAN------------------------------- 358
            +KG+   VVTYN I + LCKEG +  A                                
Sbjct: 348 VSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVVAWHLRGTGR 407

Query: 359 -----RLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKA 413
                RL+ EM  + + P++      I   CK G    A ++   +L  GL ++  T  A
Sbjct: 408 LDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGLGVNIATSNA 467

Query: 414 LIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
           LIHG C+   M  A ++L  M+D+G      +Y+ ++   C  +  E  ++L D+ + RG
Sbjct: 468 LIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQLRDDMIKRG 527

Query: 474 LCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACS 533
              D+  +   +R +C   KV+    L + M+  G+  D V Y ++   Y +A +    +
Sbjct: 528 FKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDVHKAN 587

Query: 534 DILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
             L ++ +  L     IY +    Y ++  I D
Sbjct: 588 KYLIELIKNGLRPNAVIYNALIGGYGRNGSISD 620



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 132/481 (27%), Positives = 215/481 (44%), Gaps = 55/481 (11%)

Query: 151 QVFDQMRVHN-LMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           +VF +MR  N + P ++  TV++ +L +    D  + +  ++ + G+   +  YNVL+ A
Sbjct: 201 KVFGEMRDGNAVAPDVYTYTVMIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDA 260

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
            C+S  V++  +L   M    +R  + T+  LI    +     E  AV   ME  GI+P+
Sbjct: 261 LCRSGRVEEAFQLKGRMVEGRLRPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPN 320

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEA----- 322
            V YN LI   CREG   EA RLF ++  KG     VTY  +    C+  ++E A     
Sbjct: 321 EVIYNQLIGWHCREGHCSEALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILD 380

Query: 323 -------------------------------LRLREVMAAKGVYPGVVTYNSILRKLCKE 351
                                          LRL   M A+ + P      + +++LCK 
Sbjct: 381 EMLLAGMTVHCSLFNSVVAWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKR 440

Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
           G+  +A  +   +  K +  +  T N LI+  C+  +   A KV   M+++G+  D+ TY
Sbjct: 441 GKHEEAAEIWFLVLGKGLGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITY 500

Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
             +I   CKA +M+ A +L   M+  GF P   +++  +  YCN    E +L LLD+  S
Sbjct: 501 NIMIQFCCKASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKS 560

Query: 472 RGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKA 531
            GL  D+  Y  +I  +CK + V  A +    +  NG+  ++VIY +L   Y R G    
Sbjct: 561 EGLKPDIVTYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISD 620

Query: 532 CSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLM--SKHIFKEMQLR 589
              +LD M    +  T   Y S             ++W  +   GL+  +K IF +  L+
Sbjct: 621 AIGVLDTMKHNGIQPTPITYNSL------------MYW--MCHAGLVEEAKEIFAQCILK 666

Query: 590 N 590
           N
Sbjct: 667 N 667



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 117/468 (25%), Positives = 226/468 (48%), Gaps = 20/468 (4%)

Query: 75  KHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLS 134
           + S+ +   +I+ L + + F     +L++  +  F  TP               N  + +
Sbjct: 283 RPSIVTFGILINGLARGQRFGEVDAVLQE--MEGFGITP---------------NEVIYN 325

Query: 135 WLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQL 194
            L+ ++       + L++FD+M    +   +    ++  +L K+   +   ++  +M+  
Sbjct: 326 QLIGWHCREGHCSEALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLA 385

Query: 195 GVVANIHLYNVLIHACCKSSD-VDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYE 253
           G+  +  L+N ++    + +  +D V +L+ EM  + ++ +       I   CK+G H E
Sbjct: 386 GMTVHCSLFNSVVAWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEE 445

Query: 254 ALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLID 311
           A  +   +  +G+  +I T N+LIHG C+   M+EA ++ + +   G   + +TY  +I 
Sbjct: 446 AAEIWFLVLGKGLGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQ 505

Query: 312 GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAP 371
             C+A+ +EEA++LR+ M  +G  P + T+N+ LR  C  G++ D   LL++M  + + P
Sbjct: 506 FCCKASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKP 565

Query: 372 DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
           D VT  T+I+ YCK  D   A K    +++ GL  +   Y ALI G+ +   +  A  +L
Sbjct: 566 DIVTYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVL 625

Query: 432 FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
             M   G  P+  +Y+ L+   C+    E   ++  + + + + + V  Y  +I+ FCK 
Sbjct: 626 DTMKHNGIQPTPITYNSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCKI 685

Query: 492 EKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
            K+D A   F  M    I  + + YT+L YAY + G  +    + D+M
Sbjct: 686 GKIDEAVMYFKEMHYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFDEM 733



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 114/423 (26%), Positives = 195/423 (46%), Gaps = 18/423 (4%)

Query: 75  KHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLS 134
           K ++ ++  +   L K    + A+ +L+++ L       S+ N++V  H    G   V+ 
Sbjct: 353 KQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVVAWHLRGTGRLDVV- 411

Query: 135 WLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQL 194
                          L++  +M    L P+    T  +  L K    +   +++  ++  
Sbjct: 412 ---------------LRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGK 456

Query: 195 GVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEA 254
           G+  NI   N LIH  C+ +++ +  K+L  M    V  D  TYN +I   CK     EA
Sbjct: 457 GLGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEA 516

Query: 255 LAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDG 312
           + ++D M + G  PD+ T+N+ +  +C  G++ +   L   +K  G  P+ VTY T+IDG
Sbjct: 517 IQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDG 576

Query: 313 YCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPD 372
           YC+A D+ +A +    +   G+ P  V YN+++    + G I DA  +L+ M    I P 
Sbjct: 577 YCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPT 636

Query: 373 NVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLF 432
            +T N+L+   C  G    A ++  + +   + L    Y  +I GFCK  ++D A     
Sbjct: 637 PITYNSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGKIDEAVMYFK 696

Query: 433 GMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKE 492
            M      P+  +Y+ L+  YC   N+E   KL DE VS G+  D   Y  LI   C+ +
Sbjct: 697 EMHYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFDEMVSSGIVPDTVSYNTLISGCCEVD 756

Query: 493 KVD 495
            +D
Sbjct: 757 SLD 759



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 89/303 (29%), Positives = 155/303 (51%), Gaps = 2/303 (0%)

Query: 171 LLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKD 230
           L++ L +        KV K MV  GV  +   YN++I  CCK+S +++  +L  +M  + 
Sbjct: 468 LIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQLRDDMIKRG 527

Query: 231 VRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREAR 290
            + DLFT+NT +  YC  G   + L + D+M+ EG+ PDIVTY ++I G+C+   + +A 
Sbjct: 528 FKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDVHKAN 587

Query: 291 RLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
           +   ++   G  PN V Y  LI GY R   + +A+ + + M   G+ P  +TYNS++  +
Sbjct: 588 KYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPITYNSLMYWM 647

Query: 349 CKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ 408
           C  G + +A  +  +   K I    +    +I  +CKIG    A+     M    +  ++
Sbjct: 648 CHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHYRDIRPNK 707

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
            TY  L++ +CK    + A +L   M+ +G  P   SY+ L+ G C  ++ + +++   E
Sbjct: 708 MTYTTLMYAYCKCGNKEEAFKLFDEMVSSGIVPDTVSYNTLISGCCEVDSLDKIVESPAE 767

Query: 469 FVS 471
             S
Sbjct: 768 MSS 770



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 111/448 (24%), Positives = 198/448 (44%), Gaps = 15/448 (3%)

Query: 146 TQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNV 205
            ++  Q+  +M    L P +    +L+N LA+ +    V  V ++M   G+  N  +YN 
Sbjct: 267 VEEAFQLKGRMVEGRLRPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQ 326

Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
           LI   C+     +  +L  EM  K ++  + TYN +    CK+G    A  + D M   G
Sbjct: 327 LIGWHCREGHCSEALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAG 386

Query: 266 ISPDIVTYNSLIHGFCR-EGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEA 322
           ++     +NS++    R  GR+    RL R++  +   PN    T  I   C+    EEA
Sbjct: 387 MTVHCSLFNSVVAWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEA 446

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
             +  ++  KG+   + T N+++  LC+   +++A ++L  M +  +  D +T N +I  
Sbjct: 447 AEIWFLVLGKGLGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQF 506

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
            CK      A+++++ M++ G   D FT+   +  +C   +++    LL  M   G  P 
Sbjct: 507 CCKASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPD 566

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y  ++DGYC   +     K L E +  GL  +  +Y ALI  + +   +  A  + +
Sbjct: 567 IVTYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLD 626

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDN 562
            M+ NGI    + Y SL Y    AG  +   +I      + + + +  Y      + K  
Sbjct: 627 TMKHNGIQPTPITYNSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIG 686

Query: 563 EILDLFWSHVVDRGLMSKHIFKEMQLRN 590
           +I         D  +M    FKEM  R+
Sbjct: 687 KI---------DEAVM---YFKEMHYRD 702



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 100/377 (26%), Positives = 177/377 (46%), Gaps = 13/377 (3%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSL------AKDRLTDMVWKVYKKMVQLGVVANIHLYN 204
           Q+ D+M +  +  H   C+ L NS+         RL D+V ++ ++MV   +  N  +  
Sbjct: 377 QILDEMLLAGMTVH---CS-LFNSVVAWHLRGTGRL-DVVLRLIREMVARFLKPNDAVMT 431

Query: 205 VLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMERE 264
             I   CK    ++  ++   +  K +  ++ T N LI   C+     EA  V   M   
Sbjct: 432 ACIQELCKRGKHEEAAEIWFLVLGKGLGVNIATSNALIHGLCQGNNMKEATKVLKAMVDS 491

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEA 322
           G+  D +TYN +I   C+  +M EA +L  D+  +G  P+  T+ T +  YC    +E+ 
Sbjct: 492 GVEFDRITYNIMIQFCCKASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDI 551

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
           L L + M ++G+ P +VTY +I+   CK   +  AN+ L E+ +  + P+ V  N LI  
Sbjct: 552 LHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGG 611

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           Y + G  + A+ V + M   G+     TY +L++  C A  ++ AKE+    +       
Sbjct: 612 YGRNGSISDAIGVLDTMKHNGIQPTPITYNSLMYWMCHAGLVEEAKEIFAQCILKNIELG 671

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
              Y+ ++ G+C     +  +    E   R +  +   Y  L+  +CK    + A +LF+
Sbjct: 672 VIGYTIIIQGFCKIGKIDEAVMYFKEMHYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFD 731

Query: 503 LMQGNGILGDSVIYTSL 519
            M  +GI+ D+V Y +L
Sbjct: 732 EMVSSGIVPDTVSYNTL 748



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/378 (25%), Positives = 172/378 (45%), Gaps = 18/378 (4%)

Query: 204 NVLIHACCKSSDVDKVE---KLLCEMEFKDVRADLFTYNTLI-ALYCKKGMHYEALAVQD 259
           ++L+ AC  S     +        E+  +     + T N L+ AL C   +        +
Sbjct: 146 DLLVRACLNSPAPGSLSCAADAFLELSTRGASPSIKTCNILVEALGCGGQLDLARKVFGE 205

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRAN 317
             +   ++PD+ TY  +I   CR G +  A  +  +++  G  P  VTY  L+D  CR+ 
Sbjct: 206 MRDGNAVAPDVYTYTVMIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSG 265

Query: 318 DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCN 377
            +EEA +L+  M    + P +VT+  ++  L +  R  + + +L EM    I P+ V  N
Sbjct: 266 RVEEAFQLKGRMVEGRLRPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYN 325

Query: 378 TLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA 437
            LI  +C+ G  + A+++ + M+  G+     TY  +    CK  EM+ A+++L  ML A
Sbjct: 326 QLIGWHCREGHCSEALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLA 385

Query: 438 GFSPSYCS-----YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKE 492
           G +  +CS      +W + G       + +L+L+ E V+R L  + +V  A I+  CK+ 
Sbjct: 386 GMT-VHCSLFNSVVAWHLRG---TGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRG 441

Query: 493 KVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL---MITLK 549
           K + A  ++ L+ G G+  +     +L +   +    K  + +L  M    +    IT  
Sbjct: 442 KHEEAAEIWFLVLGKGLGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYN 501

Query: 550 IYRSFSASYAKDNEILDL 567
           I   F    +K  E + L
Sbjct: 502 IMIQFCCKASKMEEAIQL 519



 Score = 42.7 bits (99), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 24/97 (24%), Positives = 48/97 (49%), Gaps = 2/97 (2%)

Query: 132 VLSWLVIFYANLKMTQ--DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYK 189
           V+ + +I     K+ +  + +  F +M   ++ P+    T L+ +  K    +  +K++ 
Sbjct: 672 VIGYTIIIQGFCKIGKIDEAVMYFKEMHYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFD 731

Query: 190 KMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEM 226
           +MV  G+V +   YN LI  CC+   +DK+ +   EM
Sbjct: 732 EMVSSGIVPDTVSYNTLISGCCEVDSLDKIVESPAEM 768


>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
          Length = 816

 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 121/402 (30%), Positives = 198/402 (49%), Gaps = 37/402 (9%)

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
           P + A   +++   K+   +    ++K+MVQ G+  ++  Y+ ++HA CK+  +DK E  
Sbjct: 219 PDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAF 278

Query: 223 LCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR 282
           L +M  K V  D +TYN LI  Y   G   EA+ V   M R+ I PD+V  N+L+   C+
Sbjct: 279 LRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCK 338

Query: 283 EGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVT 340
            G+++EAR +F  +  KG  P+  +YT +++GY     L +   L ++M   G+ P + T
Sbjct: 339 YGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYT 398

Query: 341 YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML 400
           +N +++     G +  A  + NEM +  + P  VT  T+I A C+IG    AM+  N+M+
Sbjct: 399 FNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMI 458

Query: 401 EAGLMLDQFTYKALIHGFCKAKEMDIAKELL--------------FG-----------ML 435
           + G++ D++ Y  LI GFC    +  AKEL+              FG           ++
Sbjct: 459 DQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVM 518

Query: 436 DA----------GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
           DA          G  P    Y+ L+DGYC     E  L++ D  VS G+  +V  Y  L+
Sbjct: 519 DAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLV 578

Query: 486 RRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
             +CK  ++D    LF  M   GI   +++Y  +    + AG
Sbjct: 579 NGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAG 620



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 123/429 (28%), Positives = 203/429 (47%), Gaps = 16/429 (3%)

Query: 162 MPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVV--ANIHLYNVLIHACCKSSDVDKV 219
           +P + +  +LL SL     +     + + M + G V   ++  YN +I    K  DV+K 
Sbjct: 181 VPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKA 240

Query: 220 EKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHG 279
             L  EM  + +  DL TY++++   CK     +A A   +M  +G+ PD  TYN+LI+G
Sbjct: 241 CDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYG 300

Query: 280 FCREGRMREARRLFRDIKGAT--PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPG 337
           +   G+ +EA R+F++++  +  P+ V   TL+   C+   ++EA  + + MA KG  P 
Sbjct: 301 YSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPD 360

Query: 338 VVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKN 397
           V +Y  +L     +G + D   L + M    IAPD  T N LI AY   G    AM + N
Sbjct: 361 VFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFN 420

Query: 398 RMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKN 457
            M + G+     TY  +I   C+  +MD A E    M+D G  P   +Y  L+ G+C   
Sbjct: 421 EMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHG 480

Query: 458 NEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYT 517
           +     +L+ E ++ G+ +D+  + ++I   CK  +V  AQ +F+L    G+  D+V+Y 
Sbjct: 481 SLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYN 540

Query: 518 SLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGL 577
            L   Y   G+ +    + D M    +   +  Y +    Y K   I         D GL
Sbjct: 541 MLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRI---------DEGL 591

Query: 578 MSKHIFKEM 586
               +F+EM
Sbjct: 592 ---SLFREM 597



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 127/517 (24%), Positives = 235/517 (45%), Gaps = 28/517 (5%)

Query: 75  KHSLQSHWT---MIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSH 131
           K  L  +WT   +I+  +    +K A  + +++  +  L     LN L+           
Sbjct: 285 KGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLM----------- 333

Query: 132 VLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLA-KDRLTDMVWKVYKK 190
                +  Y  +K  +D   VFD M +    P + + T++LN  A K  L DM   ++  
Sbjct: 334 ---GSLCKYGKIKEARD---VFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMT-DLFDL 386

Query: 191 MVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGM 250
           M+  G+  +I+ +NVLI A      +DK   +  EM    V+  + TY T+IA  C+ G 
Sbjct: 387 MLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGK 446

Query: 251 HYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTT 308
             +A+   ++M  +G+ PD   Y+ LI GFC  G + +A+ L  +I   G   + V + +
Sbjct: 447 MDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGS 506

Query: 309 LIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKK 368
           +I+  C+   + +A  + ++    G++P  V YN ++   C  G++  A R+ + M    
Sbjct: 507 IINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAG 566

Query: 369 IAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAK 428
           I P+ V   TL+N YCKIG     + +   ML+ G+      Y  +I G  +A     AK
Sbjct: 567 IEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAK 626

Query: 429 ELLFGMLDAGFSPSYCSYSWLVDG-YCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRR 487
                M ++G + + C+YS ++ G + N+  +EA+  L  E  +  + +D+     +I  
Sbjct: 627 VKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIF-LFKELRAMNVKIDIITLNTMIAG 685

Query: 488 FCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMIT 547
             +  +V+ A+ LF  +  +G++  +V Y+ +     + G  +   D+   M        
Sbjct: 686 MFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPD 745

Query: 548 LKIYRSFSASYAKDNEIL--DLFWSHVVDRGLMSKHI 582
            ++         K NEI+    + S + +R    +H+
Sbjct: 746 SRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHL 782



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 87/334 (26%), Positives = 145/334 (43%), Gaps = 42/334 (12%)

Query: 236 FTYNTLIALYCKKGMHYE-ALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF- 293
           +TY  L+   C +    E ALA   ++ R G+  D +  + L+ GFC   R  EA  +  
Sbjct: 114 YTYAILMDC-CTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDILL 172

Query: 294 ---------RDI---------------------------KGAT---PNHVTYTTLIDGYC 314
                     D+                           +G T   P+ V Y T+IDG+ 
Sbjct: 173 HRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFF 232

Query: 315 RANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNV 374
           +  D+ +A  L + M  +G+ P +VTY+S++  LCK   +  A   L +M  K + PDN 
Sbjct: 233 KEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNW 292

Query: 375 TCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGM 434
           T N LI  Y   G    A++V   M    ++ D      L+   CK  ++  A+++   M
Sbjct: 293 TYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTM 352

Query: 435 LDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKV 494
              G +P   SY+ +++GY  K     +  L D  +  G+  D+  +  LI+ +     +
Sbjct: 353 AMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGML 412

Query: 495 DYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
           D A  +FN M+ +G+    V Y ++  A  R G+
Sbjct: 413 DKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGK 446



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 105/476 (22%), Positives = 190/476 (39%), Gaps = 94/476 (19%)

Query: 83  TMIHILTKNKHFKSAQNMLEKIALR----DFLSTPSVLNA------LVKIHD-------- 124
           T++  L K    K A+++ + +A++    D  S   +LN       LV + D        
Sbjct: 331 TLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGD 390

Query: 125 --DPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTD 182
              PD   +  + L+  YAN  M    + +F++MR H + PH+     ++ +L +    D
Sbjct: 391 GIAPD--IYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMD 448

Query: 183 MVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLF------ 236
              + + +M+  GVV + + Y+ LI   C    + K ++L+ E+    +R D+       
Sbjct: 449 DAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSII 508

Query: 237 -----------------------------TYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
                                         YN L+  YC  G   +AL V D M   GI 
Sbjct: 509 NNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIE 568

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATP------------------------ 301
           P++V Y +L++G+C+ GR+ E   LFR++  KG  P                        
Sbjct: 569 PNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVK 628

Query: 302 -----------NHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
                      N  TY+ ++ G  +    +EA+ L + + A  V   ++T N+++  + +
Sbjct: 629 FHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQ 688

Query: 351 EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
             R+ +A  L   ++   + P  VT + +I    K G    A  + + M  AG   D   
Sbjct: 689 TRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPDSRL 748

Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLL 466
              ++    K  E+  A   L  + +  FS  + +   LVD + +K      ++ L
Sbjct: 749 LNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRFL 804



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/278 (26%), Positives = 118/278 (42%), Gaps = 38/278 (13%)

Query: 300 TPNHVTYTTLID-----------------------------------GYCRANDLEEALR 324
           +P   TY  L+D                                   G+C A   +EAL 
Sbjct: 110 SPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALD 169

Query: 325 -LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI--APDNVTCNTLIN 381
            L       G  P V +YN +L+ LC +G+   A+ LL  M E     +PD V  NT+I+
Sbjct: 170 ILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVID 229

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
            + K GD   A  +   M++ G+  D  TY +++H  CKA+ MD A+  L  M++ G  P
Sbjct: 230 GFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLP 289

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
              +Y+ L+ GY +    +  +++  E   + +  DV     L+   CK  K+  A+ +F
Sbjct: 290 DNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVF 349

Query: 502 NLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
           + M   G   D   YT +   Y   G     +D+ D M
Sbjct: 350 DTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLM 387



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/245 (22%), Positives = 95/245 (38%), Gaps = 41/245 (16%)

Query: 365 NEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEM 424
             + ++P + T   L++   +      A+    ++L  GL +D      L+ GFC+AK  
Sbjct: 105 GPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRT 164

Query: 425 D------------------------------------IAKELLFGMLDAGF--SPSYCSY 446
           D                                     A +LL  M + G   SP   +Y
Sbjct: 165 DEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAY 224

Query: 447 SWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQG 506
           + ++DG+  + +      L  E V RG+  D+  Y +++   CK   +D A+     M  
Sbjct: 225 NTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVN 284

Query: 507 NGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSAS---YAKDNE 563
            G+L D+  Y +L Y Y   G+ K    +  +M R+ ++  +    +   S   Y K  E
Sbjct: 285 KGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKE 344

Query: 564 ILDLF 568
             D+F
Sbjct: 345 ARDVF 349


>gi|449444228|ref|XP_004139877.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
 gi|449492643|ref|XP_004159059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
          Length = 585

 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 113/315 (35%), Positives = 168/315 (53%), Gaps = 8/315 (2%)

Query: 203 YNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRME 262
           +N+L+ A  K     +V  L  +M    +  + FT N LI   C      E L+    + 
Sbjct: 94  FNLLLGALAKIKHYSQVFSLYKKMHLAGLSPNFFTLNILINCLCNVNRVREGLSAMAGIM 153

Query: 263 REGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLE 320
           R G  PD+VTY SLI G C E R+ EA RLF  ++  G  PN VTY TLI G CR  ++ 
Sbjct: 154 RRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTGNIN 213

Query: 321 EALRL-REVMAAKGVY-----PGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNV 374
            AL+L +E++     Y     P + +YN I+ +LCK G+ ++A RL NEM ++ + PD V
Sbjct: 214 LALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVV 273

Query: 375 TCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGM 434
           T + LI+  CK G    A K    M+  G++ D FT+ +LI GFC   ++D AKEL   M
Sbjct: 274 TFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSM 333

Query: 435 LDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKV 494
              G+ P   SY+ L+ GYC   N E  +KL +E +  G   D+  +  L++      KV
Sbjct: 334 PSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKV 393

Query: 495 DYAQRLFNLMQGNGI 509
             A++LF +++ + +
Sbjct: 394 GDAKKLFGVVKPHAV 408



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 129/531 (24%), Positives = 243/531 (45%), Gaps = 63/531 (11%)

Query: 77  SLQSHWTMIHILTKNKHFKSAQNMLEKIAL----RDFLSTPSVLNALVKIHDDPDGNSHV 132
           S+ S   ++  L K KH+    ++ +K+ L     +F +   ++N L  ++   +G S +
Sbjct: 90  SIISFNLLLGALAKIKHYSQVFSLYKKMHLAGLSPNFFTLNILINCLCNVNRVREGLSAM 149

Query: 133 LSWL-------VIFYANL-------KMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKD 178
              +       V+ Y +L           +  ++F +M+     P++     L+  L + 
Sbjct: 150 AGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRT 209

Query: 179 RLTDMVWKVYKKMVQ------LGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVR 232
              ++  K++++M+       +    NI  YN++I   CK     + ++L  EM  + VR
Sbjct: 210 GNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVR 269

Query: 233 ADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRL 292
            D+ T++ LI   CK+GM  EA    + M   GI PD+ T+ SLI GFC  G +  A+ L
Sbjct: 270 PDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKEL 329

Query: 293 FRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
           F  +  KG  P+ ++YT LI GYC+  ++EEA++L   M   G +P + T+  +L+ L  
Sbjct: 330 FLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFL 389

Query: 351 EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
            G++ DA +L   +    +  +   C+  ++  CK G    AM++ N +    + LD  +
Sbjct: 390 AGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIES 449

Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFV 470
           +  LI G CKA++++ A EL   +   G  P   +Y  +++G+                 
Sbjct: 450 FNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGF----------------- 492

Query: 471 SRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPK 530
                             CK  +VD A  LF +M+ NG   + + Y++L + +++  + +
Sbjct: 493 ------------------CKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNNKLE 534

Query: 531 ACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKH 581
               +L  M ++ + +   IY       +KD +  +  W  ++ R  + KH
Sbjct: 535 EVVKLLHKMIQKDVSLAASIYTIVEDMVSKDEKCRE--WLDILQRFPVQKH 583



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 101/338 (29%), Positives = 163/338 (48%), Gaps = 16/338 (4%)

Query: 201 HLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA-DLFTYNTLIALYCKKGMHYEALAVQD 259
           H   + IH C K  ++   + L    +F D+    + ++N L+    K   + +  ++  
Sbjct: 61  HGLPMFIHNC-KKGNITSTQAL----QFFDLMMRSIISFNLLLGALAKIKHYSQVFSLYK 115

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRAN 317
           +M   G+SP+  T N LI+  C   R+RE       I  +G  P+ VTYT+LI G C  +
Sbjct: 116 KMHLAGLSPNFFTLNILINCLCNVNRVREGLSAMAGIMRRGYIPDVVTYTSLIKGLCMEH 175

Query: 318 DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTC- 376
            + EA RL   M   G +P VVTY ++++ LC+ G I  A +L  EM     +P  + C 
Sbjct: 176 RISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTGNINLALKLHQEM-LNGTSPYAINCK 234

Query: 377 ------NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL 430
                 N +I+  CKIG    A ++ N M++ G+  D  T+ ALI   CK   +  AK+ 
Sbjct: 235 PNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKF 294

Query: 431 LFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCK 490
           L  M+  G  P   +++ L++G+C   + ++  +L     S+G   DV  Y  LI  +CK
Sbjct: 295 LETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCK 354

Query: 491 KEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
              V+ A +L+N M   G   D   +  L    + AG+
Sbjct: 355 TFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGK 392



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 90/306 (29%), Positives = 138/306 (45%), Gaps = 15/306 (4%)

Query: 246 CKKG--MHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATP 301
           CKKG     +AL   D M R      I+++N L+    +     +   L++   + G +P
Sbjct: 70  CKKGNITSTQALQFFDLMMR-----SIISFNLLLGALAKIKHYSQVFSLYKKMHLAGLSP 124

Query: 302 NHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLL 361
           N  T   LI+  C  N + E L     +  +G  P VVTY S+++ LC E RI +A RL 
Sbjct: 125 NFFTLNILINCLCNVNRVREGLSAMAGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLF 184

Query: 362 NEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEA------GLMLDQFTYKALI 415
             M +    P+ VT  TLI   C+ G+   A+K+   ML            + F+Y  +I
Sbjct: 185 IRMQKLGCWPNVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNIFSYNIII 244

Query: 416 HGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLC 475
              CK  +   AK L   M+D G  P   ++S L+D  C +       K L+  + RG+ 
Sbjct: 245 DELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIV 304

Query: 476 VDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDI 535
            D+  + +LI  FC    +D A+ LF  M   G   D + YT L Y Y +    +    +
Sbjct: 305 PDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKL 364

Query: 536 LDDMYR 541
            ++M R
Sbjct: 365 YNEMLR 370


>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
 gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
 gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
 gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
          Length = 683

 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 116/426 (27%), Positives = 198/426 (46%), Gaps = 37/426 (8%)

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
           P + + + ++N   K+   D  +  Y +M+   +  N+  YN +I A CK+  VDK  ++
Sbjct: 86  PDVVSYSTVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEV 145

Query: 223 LCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR 282
           L  M    V  D  TYN+++  +C  G   EA+    +M  +G+ PD+VTYNSL+   C+
Sbjct: 146 LTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCK 205

Query: 283 EGRMREARRLF-----RDIK--------------------------------GATPNHVT 305
            GR  EAR++F     R +K                                G  PNH  
Sbjct: 206 NGRCTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYV 265

Query: 306 YTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMN 365
           ++ L+  Y +   +EEA+ +   M  +G+ P  VTY +++  LCK GR+ DA     +M 
Sbjct: 266 FSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMI 325

Query: 366 EKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMD 425
           ++ ++P N+  N+LI+  C       A ++   ML+ G+ L+   + ++I   CK   + 
Sbjct: 326 DEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVI 385

Query: 426 IAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
            +++L   M+  G  P   +YS L+DGYC     +   KLL   VS G+  D   Y  LI
Sbjct: 386 ESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLI 445

Query: 486 RRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
             +CK  ++  A  LF  M+ +G+  D + Y  +    ++     A  ++   + +    
Sbjct: 446 NGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQ 505

Query: 546 ITLKIY 551
           + L  Y
Sbjct: 506 LELSTY 511



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 119/424 (28%), Positives = 214/424 (50%), Gaps = 5/424 (1%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG--VVANIHLYN 204
           +D   VFD++ +   +P + +  +LLN L  +  +    ++   M   G     ++  Y+
Sbjct: 34  EDARHVFDEL-LRRGIPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92

Query: 205 VLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMERE 264
            +I+   K  D+DK      EM  + +  ++ TYN++IA  CK     +A+ V   M + 
Sbjct: 93  TVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 152

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           G+ PD +TYNS++HGFC  G+ +EA    + ++  G  P+ VTY +L+D  C+     EA
Sbjct: 153 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEA 212

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            ++ + M  +G+ P + TY ++L+    +G + + + LL+ M    I P++   + L+ A
Sbjct: 213 RKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCA 272

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           Y K      AM V ++M + GL  +  TY A+I   CK+  ++ A      M+D G SP 
Sbjct: 273 YAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPG 332

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
              Y+ L+ G C  N  E   +L+ E + RG+C++   + ++I   CK+ +V  +++LF+
Sbjct: 333 NIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFD 392

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDN 562
           LM   G+  D + Y++L   Y  AG+    + +L  M    +      Y +    Y K +
Sbjct: 393 LMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKIS 452

Query: 563 EILD 566
            + D
Sbjct: 453 RMKD 456



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 122/468 (26%), Positives = 220/468 (47%), Gaps = 22/468 (4%)

Query: 57  PSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLE---KIALRDFLSTP 113
           P  +  F K   S     +  + ++ +++  L KN     A+ + +   K  L+  ++T 
Sbjct: 174 PKEAIVFLKKMRS--DGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPEITTY 231

Query: 114 SVL-------NALVKIHDDPD--------GNSHVLSWLVIFYANLKMTQDGLQVFDQMRV 158
             L        ALV++H   D         N +V S LV  YA  +  ++ + VF +MR 
Sbjct: 232 GTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQ 291

Query: 159 HNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDK 218
             L P+      ++  L K    +     +++M+  G+     +YN LIH  C  +  ++
Sbjct: 292 QGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWER 351

Query: 219 VEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIH 278
            E+L+ EM  + +  +   +N++I  +CK+G   E+  + D M R G+ PDI+TY++LI 
Sbjct: 352 AEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLID 411

Query: 279 GFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYP 336
           G+C  G+M EA +L   +   G  P+ VTY+TLI+GYC+ + +++AL L   M + GV P
Sbjct: 412 GYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSP 471

Query: 337 GVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVK 396
            ++TYN IL+ L +  R   A  L   + +     +  T N +++  CK   T  A+++ 
Sbjct: 472 DIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALRMF 531

Query: 397 NRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNK 456
             +    L L+  T+  +I    K    D AK+L       G  P+Y +Y  + +    +
Sbjct: 532 QNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQ 591

Query: 457 NNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
              E L +L       G  VD  +   ++R   ++ ++  A    +++
Sbjct: 592 GLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMI 639



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 104/390 (26%), Positives = 185/390 (47%), Gaps = 4/390 (1%)

Query: 115 VLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNS 174
           VL  +VK    PD  ++  + +V  + +    ++ +    +MR   + P +     L++ 
Sbjct: 145 VLTTMVKSGVMPDCMTY--NSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDY 202

Query: 175 LAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRAD 234
           L K+       K++  M + G+   I  Y  L+        + ++  LL  M    +  +
Sbjct: 203 LCKNGRCTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPN 262

Query: 235 LFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR 294
            + ++ L+  Y K+    EA+ V  +M ++G++P+ VTY ++I   C+ GR+ +A   F 
Sbjct: 263 HYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFE 322

Query: 295 DI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEG 352
            +  +G +P ++ Y +LI G C  N  E A  L   M  +G+    + +NSI+   CKEG
Sbjct: 323 QMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEG 382

Query: 353 RIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYK 412
           R+ ++ +L + M    + PD +T +TLI+ YC  G    A K+   M+  G+  D  TY 
Sbjct: 383 RVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYS 442

Query: 413 ALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSR 472
            LI+G+CK   M  A  L   M  +G SP   +Y+ ++ G        A  +L       
Sbjct: 443 TLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKS 502

Query: 473 GLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
           G  +++S Y  ++   CK +  D A R+F 
Sbjct: 503 GRQLELSTYNIILHGLCKNKLTDDALRMFQ 532



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 101/373 (27%), Positives = 183/373 (49%), Gaps = 4/373 (1%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLA-KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           ++FD M    L P +     LL   A K  L +M   +   MV+ G+  N +++++L+ A
Sbjct: 214 KIFDSMTKRGLKPEITTYGTLLQGYATKGALVEM-HGLLDLMVRNGIHPNHYVFSILVCA 272

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
             K   V++   +  +M  + +  +  TY  +I + CK G   +A+   ++M  EG+SP 
Sbjct: 273 YAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPG 332

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLRE 327
            + YNSLIHG C   +   A  L  ++  +G   N + + ++ID +C+   + E+ +L +
Sbjct: 333 NIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFD 392

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
           +M   GV P ++TY++++   C  G++ +A +LL  M    + PD VT +TLIN YCKI 
Sbjct: 393 LMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKIS 452

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
               A+ +   M  +G+  D  TY  ++ G  + +    AKEL  G+  +G      +Y+
Sbjct: 453 RMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYN 512

Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGN 507
            ++ G C     +  L++        L ++   +  +I    K  + D A+ LF     N
Sbjct: 513 IILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSN 572

Query: 508 GILGDSVIYTSLA 520
           G++ +   Y  +A
Sbjct: 573 GLVPNYWTYRLMA 585



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/215 (23%), Positives = 93/215 (43%), Gaps = 3/215 (1%)

Query: 355 RDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAG--LMLDQFTYK 412
            DA  + +E+  + I PD  + N L+N  C    +  A+++ + M + G     D  +Y 
Sbjct: 34  EDARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92

Query: 413 ALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSR 472
            +I+GF K  ++D        MLD   SP+  +Y+ ++   C     +  +++L   V  
Sbjct: 93  TVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 152

Query: 473 GLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKAC 532
           G+  D   Y +++  FC   +   A      M+ +G+  D V Y SL     + G     
Sbjct: 153 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEA 212

Query: 533 SDILDDMYRRRLMITLKIYRSFSASYAKDNEILDL 567
             I D M +R L   +  Y +    YA    ++++
Sbjct: 213 RKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEM 247



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 65/268 (24%), Positives = 103/268 (38%), Gaps = 72/268 (26%)

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
           K++  MV++GV  +I  Y+ LI   C +  +D+  KLL  M    ++ D  TY+TLI  Y
Sbjct: 389 KLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGY 448

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVT--------------------------------- 272
           CK     +AL +   ME  G+SPDI+T                                 
Sbjct: 449 CKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLEL 508

Query: 273 --YNSLIHGFCREGRMREARRLFRDI---------------------------------- 296
             YN ++HG C+     +A R+F+++                                  
Sbjct: 509 STYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVA 568

Query: 297 ---KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGR 353
               G  PN+ TY  + +       LEE  +L   M   G        N I+R+L + G 
Sbjct: 569 FSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGE 628

Query: 354 IRDANRLLNEMNEKKIAPDNVTCNTLIN 381
           I  A   L+ ++EK  + +  T +  I+
Sbjct: 629 ITRAGTYLSMIDEKHFSLEASTASLFID 656


>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
          Length = 816

 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 121/402 (30%), Positives = 198/402 (49%), Gaps = 37/402 (9%)

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
           P + A   +++   K+   +    ++K+MVQ G+  ++  Y+ ++HA CK+  +DK E  
Sbjct: 219 PDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAF 278

Query: 223 LCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR 282
           L +M  K V  D +TYN LI  Y   G   EA+ V   M R+ I PD+V  N+L+   C+
Sbjct: 279 LRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCK 338

Query: 283 EGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVT 340
            G+++EAR +F  +  KG  P+  +YT +++GY     L +   L ++M   G+ P + T
Sbjct: 339 YGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICT 398

Query: 341 YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML 400
           +N +++     G +  A  + NEM +  + P  VT  T+I A C+IG    AM+  N+M+
Sbjct: 399 FNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMI 458

Query: 401 EAGLMLDQFTYKALIHGFCKAKEMDIAKELL--------------FG-----------ML 435
           + G++ D++ Y  LI GFC    +  AKEL+              FG           ++
Sbjct: 459 DQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVM 518

Query: 436 DA----------GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
           DA          G  P    Y+ L+DGYC     E  L++ D  VS G+  +V  Y  L+
Sbjct: 519 DAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLV 578

Query: 486 RRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
             +CK  ++D    LF  M   GI   +++Y  +    + AG
Sbjct: 579 NGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAG 620



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 122/429 (28%), Positives = 202/429 (47%), Gaps = 16/429 (3%)

Query: 162 MPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVV--ANIHLYNVLIHACCKSSDVDKV 219
           +P + +  +LL SL     +     + + M + G V   ++  YN +I    K  DV+K 
Sbjct: 181 VPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKA 240

Query: 220 EKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHG 279
             L  EM  + +  DL TY++++   CK     +A A   +M  +G+ PD  TYN+LI+G
Sbjct: 241 CDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYG 300

Query: 280 FCREGRMREARRLFRDIKGAT--PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPG 337
           +   G+ +EA R+F++++  +  P+ V   TL+   C+   ++EA  + + MA KG  P 
Sbjct: 301 YSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPD 360

Query: 338 VVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKN 397
           V +Y  +L     +G + D   L + M    IAP   T N LI AY   G    AM + N
Sbjct: 361 VFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFN 420

Query: 398 RMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKN 457
            M + G+     TY  +I   C+  +MD A E    M+D G  P   +Y  L+ G+C   
Sbjct: 421 EMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHG 480

Query: 458 NEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYT 517
           +     +L+ E ++ G+ +D+  + ++I   CK  +V  AQ +F+L    G+  D+V+Y 
Sbjct: 481 SLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYN 540

Query: 518 SLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGL 577
            L   Y   G+ +    + D M    +   +  Y +    Y K   I         D GL
Sbjct: 541 MLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRI---------DEGL 591

Query: 578 MSKHIFKEM 586
               +F+EM
Sbjct: 592 ---SLFREM 597



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 127/517 (24%), Positives = 233/517 (45%), Gaps = 28/517 (5%)

Query: 75  KHSLQSHWT---MIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSH 131
           K  L  +WT   +I+  +    +K A  + +++  +  L     LN L+           
Sbjct: 285 KGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLM----------- 333

Query: 132 VLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLA-KDRLTDMVWKVYKK 190
                +  Y  +K  +D   VFD M +    P + + T++LN  A K  L DM   ++  
Sbjct: 334 ---GSLCKYGKIKEARD---VFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMT-DLFDL 386

Query: 191 MVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGM 250
           M+  G+   I  +NVLI A      +DK   +  EM    V+  + TY T+IA  C+ G 
Sbjct: 387 MLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGK 446

Query: 251 HYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTT 308
             +A+   ++M  +G+ PD   Y+ LI GFC  G + +A+ L  +I   G   + V + +
Sbjct: 447 MDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGS 506

Query: 309 LIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKK 368
           +I+  C+   + +A  + ++    G++P  V YN ++   C  G++  A R+ + M    
Sbjct: 507 IINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAG 566

Query: 369 IAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAK 428
           I P+ V   TL+N YCKIG     + +   ML+ G+      Y  +I G  +A     AK
Sbjct: 567 IEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAK 626

Query: 429 ELLFGMLDAGFSPSYCSYSWLVDG-YCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRR 487
                M ++G + + C+YS ++ G + N+  +EA+  L  E  +  + +D+     +I  
Sbjct: 627 VKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIF-LFKELRAMNVKIDIITLNTMIAG 685

Query: 488 FCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMIT 547
             +  +V+ A+ LF  +  +G++  +V Y+ +     + G  +   D+   M        
Sbjct: 686 MFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPD 745

Query: 548 LKIYRSFSASYAKDNEIL--DLFWSHVVDRGLMSKHI 582
            ++         K NEI+    + S + +R    +H+
Sbjct: 746 SRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHL 782



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 86/334 (25%), Positives = 144/334 (43%), Gaps = 42/334 (12%)

Query: 236 FTYNTLIALYCKKGMHYE-ALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF- 293
           +TY  L+   C +    E ALA   ++ R G+  D +  + L+ GFC   R  EA  +  
Sbjct: 114 YTYAILMDC-CTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDILL 172

Query: 294 ---------RDI---------------------------KGAT---PNHVTYTTLIDGYC 314
                     D+                           +G T   P+ V Y T+IDG+ 
Sbjct: 173 HRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFF 232

Query: 315 RANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNV 374
           +  D+ +A  L + M  +G+ P +VTY+S++  LCK   +  A   L +M  K + PDN 
Sbjct: 233 KEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNW 292

Query: 375 TCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGM 434
           T N LI  Y   G    A++V   M    ++ D      L+   CK  ++  A+++   M
Sbjct: 293 TYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTM 352

Query: 435 LDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKV 494
              G +P   SY+ +++GY  K     +  L D  +  G+   +  +  LI+ +     +
Sbjct: 353 AMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGML 412

Query: 495 DYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
           D A  +FN M+ +G+    V Y ++  A  R G+
Sbjct: 413 DKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGK 446



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 106/474 (22%), Positives = 192/474 (40%), Gaps = 90/474 (18%)

Query: 83  TMIHILTKNKHFKSAQNMLEKIALR----DFLSTPSVLNA------LVKIHDD-----PD 127
           T++  L K    K A+++ + +A++    D  S   +LN       LV + D       D
Sbjct: 331 TLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGD 390

Query: 128 GNSHVL---SWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMV 184
           G + V+   + L+  YAN  M    + +F++MR H + PH+     ++ +L +    D  
Sbjct: 391 GIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDA 450

Query: 185 WKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLF-------- 236
            + + +M+  GVV + + Y+ LI   C    + K ++L+ E+    +R D+         
Sbjct: 451 MEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINN 510

Query: 237 ---------------------------TYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
                                       YN L+  YC  G   +AL V D M   GI P+
Sbjct: 511 LCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPN 570

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDI--KGATP-------------------------- 301
           +V Y +L++G+C+ GR+ E   LFR++  KG  P                          
Sbjct: 571 VVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFH 630

Query: 302 ---------NHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEG 352
                    N  TY+ ++ G  +    +EA+ L + + A  V   ++T N+++  + +  
Sbjct: 631 EMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTR 690

Query: 353 RIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYK 412
           R+ +A  L   ++   + P  VT + +I    K G    A  + + M  AG   D     
Sbjct: 691 RVEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLN 750

Query: 413 ALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLL 466
            ++    K  E+  A   L  + +  FS  + +   LVD + +K      ++ L
Sbjct: 751 HVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRFL 804



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/278 (26%), Positives = 118/278 (42%), Gaps = 38/278 (13%)

Query: 300 TPNHVTYTTLID-----------------------------------GYCRANDLEEALR 324
           +P   TY  L+D                                   G+C A   +EAL 
Sbjct: 110 SPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALD 169

Query: 325 -LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI--APDNVTCNTLIN 381
            L       G  P V +YN +L+ LC +G+   A+ LL  M E     +PD V  NT+I+
Sbjct: 170 ILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVID 229

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
            + K GD   A  +   M++ G+  D  TY +++H  CKA+ MD A+  L  M++ G  P
Sbjct: 230 GFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLP 289

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
              +Y+ L+ GY +    +  +++  E   + +  DV     L+   CK  K+  A+ +F
Sbjct: 290 DNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVF 349

Query: 502 NLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
           + M   G   D   YT +   Y   G     +D+ D M
Sbjct: 350 DTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLM 387



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/245 (22%), Positives = 95/245 (38%), Gaps = 41/245 (16%)

Query: 365 NEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEM 424
             + ++P + T   L++   +      A+    ++L  GL +D      L+ GFC+AK  
Sbjct: 105 GPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRT 164

Query: 425 D------------------------------------IAKELLFGMLDAGF--SPSYCSY 446
           D                                     A +LL  M + G   SP   +Y
Sbjct: 165 DEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAY 224

Query: 447 SWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQG 506
           + ++DG+  + +      L  E V RG+  D+  Y +++   CK   +D A+     M  
Sbjct: 225 NTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVN 284

Query: 507 NGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSAS---YAKDNE 563
            G+L D+  Y +L Y Y   G+ K    +  +M R+ ++  +    +   S   Y K  E
Sbjct: 285 KGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKE 344

Query: 564 ILDLF 568
             D+F
Sbjct: 345 ARDVF 349


>gi|115438490|ref|NP_001043552.1| Os01g0611900 [Oryza sativa Japonica Group]
 gi|21104680|dbj|BAB93270.1| fertility restorer homologue-like [Oryza sativa Japonica Group]
 gi|113533083|dbj|BAF05466.1| Os01g0611900 [Oryza sativa Japonica Group]
 gi|125571150|gb|EAZ12665.1| hypothetical protein OsJ_02580 [Oryza sativa Japonica Group]
 gi|215767882|dbj|BAH00111.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 800

 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 124/439 (28%), Positives = 215/439 (48%), Gaps = 5/439 (1%)

Query: 145 MTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYN 204
           M +   ++  QMR H L+P  +   +++  L  D+L      ++K+M   G+  +   YN
Sbjct: 332 MPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYN 390

Query: 205 VLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMERE 264
           +LIH  C+   + +   L  +M    V+  + TY++L+  YC  G   EA+ +   M  +
Sbjct: 391 ILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGK 450

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           G +P++VTY +L+ G   +    +A  L  ++K  G + N  TY TLI+G C    + E 
Sbjct: 451 GFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEV 510

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
             + +    +G  P  +TYNSI+    K G +  A  +  +M  K I P+ VT  + I+ 
Sbjct: 511 GEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDG 570

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           YCK      A+K+ N +   GL  D   Y +LI GFC+   M  A ++L  ML  G  P+
Sbjct: 571 YCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPN 630

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
              Y+  + GY N    E  L+L ++ +  G+ +D + Y  LI  F K   V +A +L++
Sbjct: 631 ISVYNSFITGYKNLKMMEEALRLYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYS 690

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDN 562
            M   G + D + +T+L +   R G+      +LD+M R  +   + +Y      Y ++ 
Sbjct: 691 EMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNG 750

Query: 563 EILDLFWSH--VVDRGLMS 579
           ++ + F  H  +++R +M 
Sbjct: 751 KLQEAFRLHDEMLERKIMP 769



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 113/375 (30%), Positives = 184/375 (49%), Gaps = 2/375 (0%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           ++ L ++++M    + P++     LL     +   D   K+Y +M   G   N+  Y  L
Sbjct: 403 REALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTL 462

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           +      +  DK   LL EM+   V  + +TYNTLI   C  G   E   +  R E EG 
Sbjct: 463 MKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGF 522

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
            P  +TYNS+I+GF + G M  A  +++ +  KG  PN VTYT+ IDGYC+ +  + AL+
Sbjct: 523 VPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALK 582

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           +   +  KG+ P +  YNS++   C+EG +  A ++L  M +  + P+    N+ I  Y 
Sbjct: 583 MLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYK 642

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
            +     A+++  +M++ G+ LD  TY  LI GF K   +  A +L   M+  G  P + 
Sbjct: 643 NLKMMEEALRLYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHI 702

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
           +++ L  G C   + +   KLLDE     +  +V +Y  LI  + +  K+  A RL + M
Sbjct: 703 TFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEM 762

Query: 505 QGNGILGDSVIYTSL 519
               I+ D   Y  L
Sbjct: 763 LERKIMPDDTTYDIL 777



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 117/426 (27%), Positives = 204/426 (47%), Gaps = 25/426 (5%)

Query: 63  FFKWAESAVPN-YKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVK 121
           F + A+S +P+ + +++  HW     L + +  + A N+ EK      ++   V   +V 
Sbjct: 375 FKEMADSGIPDAFTYNILIHW-----LCQRRKIREALNLWEK------MNETGVKPYIVT 423

Query: 122 IHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLT 181
            H          S L+ +  N  M  + ++++ +M      P++   T L+         
Sbjct: 424 YH----------SLLLCYCVNGCM-DEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAF 472

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
           D  + +  +M Q GV  N + YN LI+  C    V +V ++L   E +       TYN++
Sbjct: 473 DKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSI 532

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGA 299
           I  + K GM   A AV  +M  +GI P+IVTY S I G+C+      A ++  D+  KG 
Sbjct: 533 INGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGL 592

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
            P+   Y +LI G+C+  ++  AL++  +M   G+ P +  YNS +        + +A R
Sbjct: 593 RPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALR 652

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
           L  +M ++ I  D  T  TLI+ + K G+   A+K+ + M+  G + D  T+ AL HG C
Sbjct: 653 LYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLC 712

Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
           +  ++D A++LL  M      P+   Y+ L++GY      +   +L DE + R +  D +
Sbjct: 713 RNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDT 772

Query: 480 VYRALI 485
            Y  L+
Sbjct: 773 TYDILV 778



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 132/526 (25%), Positives = 217/526 (41%), Gaps = 77/526 (14%)

Query: 134 SWL--VIFYANLK--MTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYK 189
           +W+  V+  A  K  M  D +++FD+M    + P    C+V + SL K R  +    V +
Sbjct: 177 AWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLR 236

Query: 190 KMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKG 249
           KM   G V     +N ++    K   +++   +  E+     +  +    TL+  YC + 
Sbjct: 237 KMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQR 296

Query: 250 MHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD-------------- 295
              +AL + +   R+G+ P  VTY  LI G   EG   +A  L R               
Sbjct: 297 EVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFN 356

Query: 296 --IKG--------------------ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKG 333
             IKG                      P+  TY  LI   C+   + EAL L E M   G
Sbjct: 357 MVIKGLLNDKLWKDAVSLFKEMADSGIPDAFTYNILIHWLCQRRKIREALNLWEKMNETG 416

Query: 334 VYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVT------------------ 375
           V P +VTY+S+L   C  G + +A +L  EM  K   P+ VT                  
Sbjct: 417 VKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAY 476

Query: 376 ------------C-----NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGF 418
                       C     NTLIN  C +G      ++  R    G +    TY ++I+GF
Sbjct: 477 ALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGF 536

Query: 419 CKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDV 478
            KA  M  A  +   M   G  P+  +Y+  +DGYC  +  +  LK+L++   +GL  D+
Sbjct: 537 IKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDI 596

Query: 479 SVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDD 538
           + Y +LI  FC++  + +A ++  LM  +G+L +  +Y S    Y      +    + + 
Sbjct: 597 AAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRLYEK 656

Query: 539 MYRRRLMITLKIYRSFSASYAKDNEILDL--FWSHVVDRGLMSKHI 582
           M +  + +    Y +    ++KD  +      +S +V +G +  HI
Sbjct: 657 MIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHI 702



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 99/216 (45%)

Query: 295 DIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRI 354
           + +G TP+  + T L+    R+    +AL L   M  KG       ++ ++R   KEG  
Sbjct: 134 EARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGRPLDAWMFDVVMRACFKEGMY 193

Query: 355 RDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKAL 414
            DA RL +EM   +I PD   C+  I + CK+ D   A+ V  +M +AG +   FT+ ++
Sbjct: 194 DDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNSV 253

Query: 415 IHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGL 474
           +    K   M+ A  +   +L  G   S    + L+ GYC +      L + +E +  GL
Sbjct: 254 VDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDGL 313

Query: 475 CVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGIL 510
                 Y  LIR   ++   + A  L   M+ +G+L
Sbjct: 314 VPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLL 349


>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Brachypodium distachyon]
          Length = 627

 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 124/424 (29%), Positives = 202/424 (47%), Gaps = 5/424 (1%)

Query: 144 KMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLY 203
           + T   + +   M+   + P +     L+  L      D   ++ ++M + G+  N+ +Y
Sbjct: 127 RRTGQAVGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVY 186

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER 263
           + L+   CK+   + V K+  EM  + +  D+  Y  LI   C++G   +A  V D+M  
Sbjct: 187 SCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMME 246

Query: 264 EGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEE 321
            G+ P++VTYN LI+  C+EG ++EA  L  ++  KG   + VTY TLI G     +++E
Sbjct: 247 RGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDE 306

Query: 322 ALRLREVM--AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTL 379
           A+ L E M      V P VVT+NS++  LCK GR+R A ++ + M E   A + VT N L
Sbjct: 307 AMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLL 366

Query: 380 INAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGF 439
           I    ++     AM++ + M  +GL  D FTY  LI+GFCK  ++D A+ LL  M   G 
Sbjct: 367 IGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGI 426

Query: 440 SPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQR 499
            P    Y  L+   C +   E      DE   +   +DV  Y  +I   C+      A+ 
Sbjct: 427 EPELVHYIPLLAALCEQGMMEQARNFFDEM-HKNCKLDVVAYSTMIHGACRLRDRKSAEE 485

Query: 500 LFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYA 559
               M   G++ DSV Y+ L   +  +G+  A   +L  M     +  + ++ S    Y 
Sbjct: 486 FLKHMLDEGLIPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYG 545

Query: 560 KDNE 563
              +
Sbjct: 546 AKGD 549



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 120/424 (28%), Positives = 197/424 (46%), Gaps = 40/424 (9%)

Query: 203 YNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRME 262
           YN ++ A C+          L  +   + R    +Y TL+   C +    +A+ +   M+
Sbjct: 81  YNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGLLRDMQ 140

Query: 263 REGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLE 320
             G+ PD+VTY +LI G C    + +A  L R++   G  PN V Y+ L+ GYC+A   E
Sbjct: 141 ASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKAGRWE 200

Query: 321 EALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLI 380
              ++ E M+ +G+ P VV Y  ++  LC+EG+++ A +++++M E+ + P+ VT N LI
Sbjct: 201 CVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLI 260

Query: 381 NAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGML--DAG 438
           N+ CK G    AM ++N MLE G+ LD  TY  LI G     EMD A  LL  M+  +  
Sbjct: 261 NSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETM 320

Query: 439 FSPSYCSYSWLVDGYCNKN-----------------------------------NEEALL 463
             P+  +++ ++ G C                                        +  +
Sbjct: 321 VEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAM 380

Query: 464 KLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAY 523
           +L+DE  S GL  D   Y  LI  FCK  +VD A+ L + M+ +GI  + V Y  L  A 
Sbjct: 381 ELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAAL 440

Query: 524 WRAGEPKACSDILDDMYRR-RLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHI 582
              G  +   +  D+M++  +L +         A   +D +  + F  H++D GL+   +
Sbjct: 441 CEQGMMEQARNFFDEMHKNCKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDSV 500

Query: 583 FKEM 586
              M
Sbjct: 501 TYSM 504



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 119/386 (30%), Positives = 192/386 (49%), Gaps = 7/386 (1%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           +VF++M    + P +   T L++SL ++       +V  KM++ G+  N+  YNVLI++ 
Sbjct: 204 KVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLINSM 263

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRM--EREGISP 268
           CK   V +   L   M  K V  D  TYNTLI          EA+ + + M      + P
Sbjct: 264 CKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETMVEP 323

Query: 269 DIVTYNSLIHGFCREGRMREARRLFRDI---KGATPNHVTYTTLIDGYCRANDLEEALRL 325
           ++VT+NS+IHG C+ GRMR+A ++ RD+    G   N VT+  LI G  R + +++A+ L
Sbjct: 324 NVVTFNSVIHGLCKTGRMRQAFQV-RDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMEL 382

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
            + MA+ G+ P   TY+ ++   CK  ++  A  LL++M    I P+ V    L+ A C+
Sbjct: 383 MDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCE 442

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            G    A    + M      LD   Y  +IHG C+ ++   A+E L  MLD G  P   +
Sbjct: 443 QGMMEQARNFFDEM-HKNCKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDSVT 501

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           YS L++ + N  +  A  ++L +  + G   DV+V+ +LI+ +  K   +    L   M 
Sbjct: 502 YSMLINMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTEKVLELIREMT 561

Query: 506 GNGILGDSVIYTSLAYAYWRAGEPKA 531
              I  DS I +++        E KA
Sbjct: 562 AKDIALDSKIISTIYTCLVANNEGKA 587



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 74/246 (30%), Positives = 115/246 (46%), Gaps = 2/246 (0%)

Query: 302 NHVTYTTLIDGYCRAND-LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRL 360
           + V+Y T++   CR    L+ AL L  VMA +   P  V+Y +++R LC E R   A  L
Sbjct: 77  DAVSYNTVLAALCRQGGCLDAALFLLRVMAHE-TRPTAVSYTTLMRALCAERRTGQAVGL 135

Query: 361 LNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCK 420
           L +M    + PD VT  TLI   C   D   A+++   M E+G+  +   Y  L+ G+CK
Sbjct: 136 LRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCK 195

Query: 421 AKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSV 480
           A   +   ++   M   G  P    Y+ L+D  C +   +   +++D+ + RGL  +V  
Sbjct: 196 AGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVT 255

Query: 481 YRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMY 540
           Y  LI   CK+  V  A  L N M   G+  D+V Y +L        E      +L++M 
Sbjct: 256 YNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMI 315

Query: 541 RRRLMI 546
               M+
Sbjct: 316 HGETMV 321



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 73/243 (30%), Positives = 114/243 (46%), Gaps = 3/243 (1%)

Query: 315 RANDLEEALRLREVMAAKGVYPGV---VTYNSILRKLCKEGRIRDANRLLNEMNEKKIAP 371
           R N L   + L E  A     P V   V+YN++L  LC++G   DA   L  +   +  P
Sbjct: 52  RLNRLLRLVPLPESPALLSSLPSVRDAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRP 111

Query: 372 DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
             V+  TL+ A C    T  A+ +   M  +G+  D  TY  LI G C A ++D A ELL
Sbjct: 112 TAVSYTTLMRALCAERRTGQAVGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELL 171

Query: 432 FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
             M ++G  P+   YS L+ GYC     E + K+ +E   RG+  DV +Y  LI   C++
Sbjct: 172 REMCESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCRE 231

Query: 492 EKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIY 551
            KV  A ++ + M   G+  + V Y  L  +  + G  K    + ++M  + + +    Y
Sbjct: 232 GKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTY 291

Query: 552 RSF 554
            + 
Sbjct: 292 NTL 294



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 87/193 (45%)

Query: 372 DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
           D V+ NT++ A C+ G    A     R++         +Y  L+   C  +    A  LL
Sbjct: 77  DAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGLL 136

Query: 432 FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
             M  +G  P   +Y  L+ G C+  + +  ++LL E    G+  +V VY  L++ +CK 
Sbjct: 137 RDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKA 196

Query: 492 EKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIY 551
            + +   ++F  M G GI  D V+YT L  +  R G+ K  + ++D M  R L   +  Y
Sbjct: 197 GRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTY 256

Query: 552 RSFSASYAKDNEI 564
                S  K+  +
Sbjct: 257 NVLINSMCKEGSV 269


>gi|115473997|ref|NP_001060597.1| Os07g0671200 [Oryza sativa Japonica Group]
 gi|22831126|dbj|BAC15987.1| putative crp1(chloroplast RNA processing 1) protein [Oryza sativa
           Japonica Group]
 gi|113612133|dbj|BAF22511.1| Os07g0671200 [Oryza sativa Japonica Group]
          Length = 551

 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 113/371 (30%), Positives = 193/371 (52%), Gaps = 2/371 (0%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           Q+ D+M  H +  +      LL++  +++  D V ++ K M   G+   +  Y +L+   
Sbjct: 164 QLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVDGL 223

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
             + D+ KVE +  EM+ K++  D++ Y+++I  YC+ G    A  V D     GI P+ 
Sbjct: 224 SAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNE 283

Query: 271 VTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
            TY +LI+GFC+ G+M  A  L  D  ++G   N + + T+IDGYCR N +++AL ++ +
Sbjct: 284 HTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMI 343

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M   G+   V TYN++   L +  R+ +A  LL  M EK + P++V+  TLI+ +C  GD
Sbjct: 344 MEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGD 403

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
              A ++   M   G      TY  ++ G+ K   +  A+     M   G  P   SY+ 
Sbjct: 404 MVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAA 463

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG 508
           LV G+C     +  L+L +E   RG   ++  Y ALI    K+ + + A +L++ M G+G
Sbjct: 464 LVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDG 523

Query: 509 ILGDSVIYTSL 519
           +  D  +Y++L
Sbjct: 524 LTPDDALYSAL 534



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 95/368 (25%), Positives = 176/368 (47%), Gaps = 2/368 (0%)

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER 263
           +V++   CKS  V    +LL EM    V+ +   YN+L+  Y ++        +   ME 
Sbjct: 147 SVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMEN 206

Query: 264 EGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGA--TPNHVTYTTLIDGYCRANDLEE 321
           EGI P + TY  L+ G      + +   +F ++K    + +   Y+++I+ YCRA ++  
Sbjct: 207 EGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRR 266

Query: 322 ALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
           A  + +     G+ P   TY +++   CK G++  A  L+ +M  + +  + +  NT+I+
Sbjct: 267 ASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMID 326

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
            YC+      A+++K  M + G+ LD +TY  L  G  +A  MD AK LL  M++ G  P
Sbjct: 327 GYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRP 386

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
           ++ SY+ L+  +CN+ +     +L  E    G    +  Y  ++  + KK  +  A+R  
Sbjct: 387 NHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFK 446

Query: 502 NLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKD 561
           N M+  G++ D   Y +L + +   G+      + ++M +R     L  Y +  +  AK+
Sbjct: 447 NEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKE 506

Query: 562 NEILDLFW 569
               + F 
Sbjct: 507 GRSEEAFQ 514



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 90/312 (28%), Positives = 149/312 (47%), Gaps = 37/312 (11%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           VF++M+  NL   ++  + ++N+  +        +V+ + V  G+  N H Y  LI+  C
Sbjct: 235 VFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFC 294

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           K   ++  E L+ +M+ + V  +   +NT+I  YC+K M  +AL ++  ME+ GI  D+ 
Sbjct: 295 KIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVY 354

Query: 272 TYNSLIHGF-----------------------------------CREGRMREARRLFRDI 296
           TYN+L  G                                    C EG M EARRLFR++
Sbjct: 355 TYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREM 414

Query: 297 --KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRI 354
              GA P+ VTY  ++DGY +   + EA R +  M  KG+ P + +Y +++   C  G++
Sbjct: 415 AGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKV 474

Query: 355 RDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKAL 414
             A RL  EM ++   P+ V    LI+   K G +  A ++ + ML  GL  D   Y AL
Sbjct: 475 DVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSAL 534

Query: 415 IHGFCKAKEMDI 426
           +      K+ ++
Sbjct: 535 VGSLHTDKKQNV 546



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 66/222 (29%), Positives = 105/222 (47%), Gaps = 2/222 (0%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N  V + ++  Y    M    L++   M    +   ++    L   L +    D    + 
Sbjct: 317 NQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLL 376

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
           + M++ GV  N   Y  LI   C   D+ +  +L  EM        L TYN ++  Y KK
Sbjct: 377 RIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKK 436

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTY 306
           G   EA   ++ ME++G+ PDI +Y +L+HG C  G++  A RLF ++K  G+ PN V Y
Sbjct: 437 GSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAY 496

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
           T LI G  +    EEA +L + M   G+ P    Y++++  L
Sbjct: 497 TALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALVGSL 538



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 107/221 (48%), Gaps = 12/221 (5%)

Query: 371 PDNVT---CNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIA 427
           PD+VT    + +++ YCK G  A A ++ + M   G+ ++   Y +L+  + + K+ D  
Sbjct: 138 PDSVTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRV 197

Query: 428 KELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRR 487
            E+L  M + G  P+  +Y+ LVDG     +   +  + +E  S+ L  DV  Y ++I  
Sbjct: 198 AEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINA 257

Query: 488 FCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMIT 547
           +C+   V  A  +F+   GNGI  +   Y +L   + + G+ +A   ++ DM  R + I 
Sbjct: 258 YCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGIN 317

Query: 548 LKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKEMQL 588
             ++ +    Y + N         +VD+ L  K I ++M +
Sbjct: 318 QIVFNTMIDGYCRKN---------MVDKALEIKMIMEKMGI 349


>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
 gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
          Length = 814

 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 140/528 (26%), Positives = 243/528 (46%), Gaps = 33/528 (6%)

Query: 11  TKFIKTISAIMLKGH-WA-----KLLNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFF 64
           T  ++TI  + L G  W+      +L P +   +  + +  VL +L     +   + +FF
Sbjct: 52  TSIVETIKDVRLDGSSWSVHNIRNVLGP-VHGQVLGSHVAAVLRSL----KVTGTAISFF 106

Query: 65  KWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHD 124
           +WA      ++H + ++  ++++L   K++     + E+               ++K   
Sbjct: 107 RWAGEQA-GFQHDVFTYNCLMNLLVAEKNYSQCYAIHEE---------------MLKAGI 150

Query: 125 DPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMV 184
            P  N+   + L+  +A  +   D +  F+ M+     P LH   +L++ L K  + +  
Sbjct: 151 AP--NTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKA 208

Query: 185 WKVYKKMVQLGVVA-NIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIA 243
           ++V+ +M+ +G V  +  L+  ++    K+  V +  ++  +ME      D   YNT+I 
Sbjct: 209 FEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMID 268

Query: 244 LYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATP 301
              K G   EAL V D M  +   P  VTY  L++  C+ G +  A  LFR +   G  P
Sbjct: 269 GLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRP 328

Query: 302 NHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLL 361
           N V YT+LI G+ ++  ++EA  L + M   G  P V+T+  ++  LCK G    A +  
Sbjct: 329 NSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSF 388

Query: 362 NEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKA 421
            EM      P+ VT  T+I    KIG  A+A ++   M+  G   D  TY  L+ GFCK 
Sbjct: 389 EEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKL 448

Query: 422 KEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNN-EEALLKLLDEFVSRGLCVDVSV 480
             +D A +LL  +     SP+   YS LV+G C+  + E+ L  L ++  +    +D  +
Sbjct: 449 GRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGL 508

Query: 481 YRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
             ++I   CK  ++D A R+F  M   G   D+  Y  L     R+ E
Sbjct: 509 CCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRE 556



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 122/451 (27%), Positives = 197/451 (43%), Gaps = 40/451 (8%)

Query: 144 KMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLY 203
           K  ++  +VF QM      P   A   +++ LAK        KV   M+    V     Y
Sbjct: 239 KRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTY 298

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER 263
            +L+++ CK+  +++ E+L   M     R +   Y +LI  + K G   EA ++ D M  
Sbjct: 299 GILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVE 358

Query: 264 EGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEE 321
            G  PD++T+  +I G C+ G   +A + F ++   G  PN VTYTT+I G  +   +  
Sbjct: 359 AGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVAN 418

Query: 322 ALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAP---------- 371
           A R+ + M A G +P  VTY  +L   CK GR+ +A +LL+E+++   +P          
Sbjct: 419 AFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVN 478

Query: 372 --------------------------DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLM 405
                                     D   C ++I   CK G    A ++  RM+  G  
Sbjct: 479 GLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCK 538

Query: 406 LDQFTYKALIHGFCKAKE--MDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALL 463
            D  TY  LI+G C+++E  ++ A  LL  +   G+ P   +Y+ L  G C     +  +
Sbjct: 539 PDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAV 598

Query: 464 KLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAY 523
           K+L+E  SRG   DV  Y AL    C + +VD A  LF  M   G   D+  Y  +    
Sbjct: 599 KMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGL 658

Query: 524 WRAGEPKACSDILDDMYRRRLMITLKIYRSF 554
            +  + +      D+M  +    T+  Y + 
Sbjct: 659 IKVKKLEDACKFFDEMIGKGQKPTVATYTAL 689



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 129/484 (26%), Positives = 215/484 (44%), Gaps = 24/484 (4%)

Query: 83  TMIHILTKNKHFKSA----QNMLEKIALRDFLSTPSVLNALVKIHDDPDG---------- 128
           TMI  L K  H + A     NML K  +   ++   ++N+L K                 
Sbjct: 265 TMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAAS 324

Query: 129 ----NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMV 184
               NS + + L+  +A     ++   +FD+M      P +   TV+++ L K    +  
Sbjct: 325 GFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQA 384

Query: 185 WKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIAL 244
            K +++M++ G   N+  Y  +I    K   V    +++  M       D  TY  L+  
Sbjct: 385 AKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDG 444

Query: 245 YCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA-RRLFRDIKGA--TP 301
           +CK G   EA  + D +++   SP++  Y+SL++G C  G + +    LF   K A  T 
Sbjct: 445 FCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETL 504

Query: 302 NHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK--EGRIRDANR 359
           +     ++I G C+   L+EA R+ + M ++G  P   TYN ++  LC+  E R+  A  
Sbjct: 505 DPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFA 564

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
           LL+++ +    PD VT   L    CKIG+   A+K+       G   D   Y AL  G C
Sbjct: 565 LLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLC 624

Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
              ++D A  L   M+  G +P   +Y  +++G       E   K  DE + +G    V+
Sbjct: 625 YQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVA 684

Query: 480 VYRALIRRFCKKEKVDYAQRLFNLMQGNG-ILGDSVIYTSLAYAYWRAGEPKACSDILDD 538
            Y AL++  C    VD A   F  M   G ++G  +IY +L + + +A +  A   + +D
Sbjct: 685 TYTALVQALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFED 744

Query: 539 MYRR 542
           M  R
Sbjct: 745 MISR 748



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 123/470 (26%), Positives = 202/470 (42%), Gaps = 33/470 (7%)

Query: 60  SCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNAL 119
           +C+ F   E     Y+  + +H  MI  L K+ +F+ A    E++ +R     P+V+   
Sbjct: 349 ACSLFD--EMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEM-MRGGCK-PNVVT-- 402

Query: 120 VKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDR 179
                         + ++   + +    +  ++   M  H   P       LL+   K  
Sbjct: 403 -------------YTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLG 449

Query: 180 LTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYN 239
             D   ++  ++ +     N+ LY+ L++  C   D   VEK L ++ F+  +A   T +
Sbjct: 450 RLDEAAQLLDELDKCSSSPNLQLYSSLVNGLC---DGGSVEKTLDDL-FEQSKAAAETLD 505

Query: 240 -----TLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR--EGRMREARRL 292
                ++I   CK G   EA  +  RM  EG  PD  TYN LI+G CR  E R+  A  L
Sbjct: 506 PGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFAL 565

Query: 293 FRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
             D++  G  P+ VTYT L  G C+  +++ A+++ E  +++G    VV Y ++   LC 
Sbjct: 566 LHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCY 625

Query: 351 EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
           +G++  A  L  EM  +  APD      +IN   K+     A K  + M+  G      T
Sbjct: 626 QGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVAT 685

Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAG-FSPSYCSYSWLVDGYCNKNNEEALLKLLDEF 469
           Y AL+   C A  +D A      ML  G    S   Y  L+ G+C     +A LKL ++ 
Sbjct: 686 YTALVQALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDM 745

Query: 470 VSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
           +SRG         +L     +  K + AQ L   M   G    +  +T++
Sbjct: 746 ISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAI 795



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 92/365 (25%), Positives = 168/365 (46%), Gaps = 3/365 (0%)

Query: 193 QLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHY 252
           Q G   ++  YN L++      +  +   +  EM    +  + F++N LI  + +     
Sbjct: 112 QAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRAD 171

Query: 253 EALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKG---ATPNHVTYTTL 309
           +A+   + M+R+   PD+ T+  L+   C+ G   +A  +F ++       P+   +T +
Sbjct: 172 DAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAM 231

Query: 310 IDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI 369
           +    +A  ++EA  +   M   G  P  + YN+++  L K G  ++A ++L+ M  K  
Sbjct: 232 VRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKAC 291

Query: 370 APDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKE 429
            P  VT   L+N+ CK G    A ++   M  +G   +   Y +LIHGF K+  M  A  
Sbjct: 292 VPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACS 351

Query: 430 LLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFC 489
           L   M++AG+ P   +++ ++DG C   N E   K  +E +  G   +V  Y  +I+   
Sbjct: 352 LFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLS 411

Query: 490 KKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLK 549
           K  +V  A R+   M  +G   DSV Y  L   + + G     + +LD++ +      L+
Sbjct: 412 KIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQ 471

Query: 550 IYRSF 554
           +Y S 
Sbjct: 472 LYSSL 476



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 86/324 (26%), Positives = 158/324 (48%), Gaps = 9/324 (2%)

Query: 152 VFDQMRV--HNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           +F+Q +     L P L  C  ++  L K    D   +++++MV  G   +   YN+LI+ 
Sbjct: 493 LFEQSKAAAETLDPGL--CCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILING 550

Query: 210 CCKSSD--VDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
            C+S +  V++   LL ++E      D  TY  L    CK G    A+ + +     G +
Sbjct: 551 LCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWN 610

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
            D+V Y +L  G C +G++  A  LF+++  +G  P+   Y  +I+G  +   LE+A + 
Sbjct: 611 ADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKF 670

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDA-NRLLNEMNEKKIAPDNVTCNTLINAYC 384
            + M  KG  P V TY ++++ LC  G + +A +R  + +   ++    +  + LI+ +C
Sbjct: 671 FDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFC 730

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           K     +A+K+   M+  G +    T  +L  G  ++ + + A+ELL  M   G  P   
Sbjct: 731 KALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAA 790

Query: 445 SYSWLVDGYCNKNNEEALLKLLDE 468
           +++ ++DG    +    LLKL+ E
Sbjct: 791 TFTAILDGLRKSDESGKLLKLVQE 814



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 79/355 (22%), Positives = 145/355 (40%), Gaps = 41/355 (11%)

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           D+FTYN L+ L   +  + +  A+ + M + GI+P+  ++N LI  F R  R  +A   F
Sbjct: 118 DVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCF 177

Query: 294 RDIKG--ATPNHVTYTTLIDGYCRANDLEEALRL-REVMAAKGVYPGVVTYNSILRKLCK 350
             +K     P+  T+  L+D  C+A   E+A  +  E+MA   V P    + +++R L K
Sbjct: 178 EIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLK 237

Query: 351 EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
             R+++A  +  +M +    PD +                                    
Sbjct: 238 AKRVKEAREVFGQMEKCGFPPDAIA----------------------------------- 262

Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFV 470
           Y  +I G  KA     A ++L  ML     P+  +Y  LV+  C     E   +L     
Sbjct: 263 YNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMA 322

Query: 471 SRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPK 530
           + G   +  +Y +LI  F K  ++  A  LF+ M   G   D + +T +     ++G  +
Sbjct: 323 ASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFE 382

Query: 531 ACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKE 585
             +   ++M R      +  Y +     +K   + + F    + +G+++   F +
Sbjct: 383 QAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFR---IMKGMIAHGCFPD 434


>gi|145326646|ref|NP_001077770.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332196072|gb|AEE34193.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 806

 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 133/531 (25%), Positives = 246/531 (46%), Gaps = 43/531 (8%)

Query: 24  GHWAKLLNPNIASSL-TSTAIHKVLLNLYN------C-CHIPSLSCAFFKWAESAVPNYK 75
           G + ++  P++A SL     I ++ LN+Y+      C C    LS +   + +     ++
Sbjct: 114 GVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQ 173

Query: 76  HSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDP--------- 126
             + +  T++H L        A  +   +    FL   ++ + +V+I   P         
Sbjct: 174 PDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLI 233

Query: 127 -----DG-----------------NSHVLSWLVIFYANLKM--TQDGLQVFDQMRVHNLM 162
                +G                 +  V+++  I     KM  T+  L +  +M   ++ 
Sbjct: 234 NGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIK 293

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
           P +   + +++ L KD        ++ +M++ G+  N+  YN +I   C        ++L
Sbjct: 294 PDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRL 353

Query: 223 LCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR 282
           L +M  +++  D+ T+N LI+   K+G  +EA  + D M    I PD VTYNS+I+GFC+
Sbjct: 354 LRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCK 413

Query: 283 EGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYN 342
             R  +A+ +F  +  A+P+ VT+ T+ID YCRA  ++E ++L   ++ +G+     TYN
Sbjct: 414 HNRFDDAKHMFDLM--ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYN 471

Query: 343 SILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEA 402
           +++   C+   +  A  L  EM    + PD +TCN L+  +C+      A+++   +  +
Sbjct: 472 TLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMS 531

Query: 403 GLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEAL 462
            + LD   Y  +IHG CK  ++D A +L   +   G  P   +Y+ ++ G+C K+     
Sbjct: 532 KIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDA 591

Query: 463 LKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDS 513
             L  +    G   D S Y  LIR   K  ++D +  L + M+ NG  GD+
Sbjct: 592 NVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDA 642



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 121/429 (28%), Positives = 198/429 (46%), Gaps = 41/429 (9%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           + + +FDQM    L P +     L+N L  +        +  KMV  G+  ++  Y  ++
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           +  CK  D      LL +ME   ++ D+  Y+ +I   CK G H +A  +   M  +GI+
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 328

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
           P++ TYN +I GFC  GR  +A+RL RD+  +   P+ +T+  LI    +   L EA +L
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKL 388

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
            + M  + ++P  VTYNS++   CK  R  DA  + + M     +PD VT NT+I+ YC+
Sbjct: 389 CDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCR 444

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
                  M++   +   GL+ +  TY  LIHGFC+   ++ A++L   M+  G  P   +
Sbjct: 445 AKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTIT 504

Query: 446 YSWLVDGYCNKNNEEALLKLLD--------------EFVSRGLC---------------- 475
            + L+ G+C     E  L+L +                +  G+C                
Sbjct: 505 CNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLP 564

Query: 476 -----VDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPK 530
                 DV  Y  +I  FC K  +  A  LF+ M+ NG   D+  Y +L     +AGE  
Sbjct: 565 IHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEID 624

Query: 531 ACSDILDDM 539
              +++ +M
Sbjct: 625 KSIELISEM 633



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 133/510 (26%), Positives = 241/510 (47%), Gaps = 40/510 (7%)

Query: 56  IPSLSCAFFKWAESAVPNYKH---SLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLST 112
           +PSL+   F+  E  + +  H   SL         + +++ F +A +  + I +   ++ 
Sbjct: 62  LPSLTQVTFEGEELKLKSGSHYFKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNR 121

Query: 113 PSVLNAL---VKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACT 169
           P V  +L   ++I   P  N +  + L+  + +       L  F ++      P +    
Sbjct: 122 PDVAISLYRKMEIRRIP-LNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFN 180

Query: 170 VLLNSLA-KDRLTDMVW--------------KVYKKMVQLGVVANIHLYNVLIHACCKSS 214
            LL+ L  +DR+++ +                ++ +MV++G+   +  +N LI+  C   
Sbjct: 181 TLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEG 240

Query: 215 DVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYN 274
            V +   L+ +M  K +  D+ TY T++   CK G    AL +  +ME   I PD+V Y+
Sbjct: 241 RVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYS 300

Query: 275 SLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAK 332
           ++I   C++G   +A+ LF ++  KG  PN  TY  +IDG+C      +A RL   M  +
Sbjct: 301 AIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIER 360

Query: 333 GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
            + P V+T+N+++    KEG++ +A +L +EM  + I PD VT N++I  +CK       
Sbjct: 361 EINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCK------- 413

Query: 393 MKVKNRMLEAGLMLDQF------TYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSY 446
               NR  +A  M D        T+  +I  +C+AK +D   +LL  +   G   +  +Y
Sbjct: 414 ---HNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTY 470

Query: 447 SWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQG 506
           + L+ G+C  +N  A   L  E +S G+C D      L+  FC+ EK++ A  LF ++Q 
Sbjct: 471 NTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQM 530

Query: 507 NGILGDSVIYTSLAYAYWRAGEPKACSDIL 536
           + I  D+V Y  + +   +  +     D+ 
Sbjct: 531 SKIDLDTVAYNIIIHGMCKGSKVDEAWDLF 560



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 107/364 (29%), Positives = 175/364 (48%), Gaps = 24/364 (6%)

Query: 225 EMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREG 284
           +ME + +  +++++N LI  +C       +L+   ++ + G  PD+VT+N+L+HG C E 
Sbjct: 131 KMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLED 190

Query: 285 RMREARRLFRDIK-----------------GATPNHVTYTTLIDGYCRANDLEEALRLRE 327
           R+ EA  LF  +                  G TP  +T+ TLI+G C    + EA  L  
Sbjct: 191 RISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVN 250

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
            M  KG++  VVTY +I+  +CK G  + A  LL++M E  I PD V  + +I+  CK G
Sbjct: 251 KMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDG 310

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
             + A  + + MLE G+  + FTY  +I GFC       A+ LL  M++   +P   +++
Sbjct: 311 HHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFN 370

Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGN 507
            L+     +       KL DE + R +  D   Y ++I  FCK  + D A+ +F+LM   
Sbjct: 371 ALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASP 430

Query: 508 GILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKD---NEI 564
               D V + ++   Y RA        +L ++ RR L+     Y +    + +    N  
Sbjct: 431 ----DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAA 486

Query: 565 LDLF 568
            DLF
Sbjct: 487 QDLF 490



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 91/309 (29%), Positives = 151/309 (48%), Gaps = 12/309 (3%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHAC----TVLLNSLAKDRLTDMV 184
           N  VL++  +  A++K   +G ++F+  ++ + M  LH C    TV  NS+         
Sbjct: 363 NPDVLTFNALISASVK---EG-KLFEAEKLCDEM--LHRCIFPDTVTYNSMIYGFCKHNR 416

Query: 185 WKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIAL 244
           +   K M  L    ++  +N +I   C++  VD+  +LL E+  + + A+  TYNTLI  
Sbjct: 417 FDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHG 476

Query: 245 YCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGATPN-- 302
           +C+      A  +   M   G+ PD +T N L++GFC   ++ EA  LF  I+ +  +  
Sbjct: 477 FCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLD 536

Query: 303 HVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLN 362
            V Y  +I G C+ + ++EA  L   +   GV P V TYN ++   C +  I DAN L +
Sbjct: 537 TVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFH 596

Query: 363 EMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAK 422
           +M +    PDN T NTLI    K G+   ++++ + M   G   D FT K      C+  
Sbjct: 597 KMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEEIICRVS 656

Query: 423 EMDIAKELL 431
           + +I +  L
Sbjct: 657 DEEIIENYL 665


>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
 gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 113/361 (31%), Positives = 189/361 (52%), Gaps = 2/361 (0%)

Query: 170 VLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFK 229
           +L+N  ++ +  D  + V  K+++LG   +   ++ LI+  C      +  +   EM   
Sbjct: 124 ILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVAS 183

Query: 230 DVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA 289
             + +L TYNT+I  +CK G    A+ +  +M++ G  PDIV YN++I G C++  + EA
Sbjct: 184 GYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEA 243

Query: 290 RRLFRDIKG--ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRK 347
             +F +IKG    P+  TY+ L+ G C ++  EEA  L   M +  + P VVT+N ++ K
Sbjct: 244 LDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDK 303

Query: 348 LCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLD 407
           LCKEG + +A  ++  M EK + P+  T N+L+N YC       A  V + M+  G M +
Sbjct: 304 LCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPN 363

Query: 408 QFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLD 467
             +Y  LI+G+CKA+ +D A+EL   M   G  P+  +Y+ L+ G C         +L  
Sbjct: 364 VVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFK 423

Query: 468 EFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
           +  ++G   D+     L+   CK   +D A RLF  MQ + +  + V Y  L  A +++G
Sbjct: 424 DMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAMYKSG 483

Query: 528 E 528
           +
Sbjct: 484 K 484



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 115/388 (29%), Positives = 190/388 (48%), Gaps = 2/388 (0%)

Query: 142 NLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIH 201
           +L   +D L  F+ M   + +P +     LL++L + +    V  + K++  L +  ++ 
Sbjct: 61  SLTNIEDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVF 120

Query: 202 LYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRM 261
            +N+LI+   +   VD    +L ++       D  T+++LI   C +     A+   D M
Sbjct: 121 HFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEM 180

Query: 262 EREGISPDIVTYNSLIHGFCREGRMREARRLFR--DIKGATPNHVTYTTLIDGYCRANDL 319
              G  P++ TYN++I GFC+ G+   A  L +  D  G  P+ V Y T+IDG C+   +
Sbjct: 181 VASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLV 240

Query: 320 EEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTL 379
            EAL +   +  KGV P V TY+ ++  LC   +  +A+ L NEM    I PD VT N L
Sbjct: 241 SEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNIL 300

Query: 380 INAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGF 439
           ++  CK G  + A  +   M+E G+  +  TY +L++G+C   ++  A+ +   M+  G 
Sbjct: 301 VDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGC 360

Query: 440 SPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQR 499
            P+  SY+ L++GYC     +   +L DE   RGL  +   Y  LI   C+  +   A+ 
Sbjct: 361 MPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARE 420

Query: 500 LFNLMQGNGILGDSVIYTSLAYAYWRAG 527
           LF  MQ  G   D V  T L  +  + G
Sbjct: 421 LFKDMQAQGCSPDLVTCTILLDSLCKLG 448



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 117/427 (27%), Positives = 198/427 (46%), Gaps = 47/427 (11%)

Query: 41  TAIHKVLLNLYNCCHIPSLSCAF-FKWAESAVPNYKH-----SLQSHWTMIHILTKNKHF 94
           T I   L +  +  H   L C   F    SA+   KH     SL     ++ I     HF
Sbjct: 63  TNIEDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHF 122

Query: 95  KSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFD 154
               N   ++   DF    SVL  ++K+  +PD  +   S L+            ++ FD
Sbjct: 123 NILINCFSRLQRVDF--AFSVLGKIIKLGFEPDAVT--FSSLINGLCFEDKFARAMEFFD 178

Query: 155 QMRVHNLMPHLHA--------CTV---------------------------LLNSLAKDR 179
           +M      P+LH         C +                           +++ L KDR
Sbjct: 179 EMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDR 238

Query: 180 LTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYN 239
           L      ++ ++   GV  ++  Y++L+H  C S   ++   L  EM   ++  D+ T+N
Sbjct: 239 LVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFN 298

Query: 240 TLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--K 297
            L+   CK+GM  EA  +   M  +G+ P+  TYNSL++G+C + ++ EAR +F  +  K
Sbjct: 299 ILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITK 358

Query: 298 GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDA 357
           G  PN V+Y  LI+GYC+A  ++EA  L + M+ +G+ P    YN+++  LC+ GR  +A
Sbjct: 359 GCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEA 418

Query: 358 NRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHG 417
             L  +M  +  +PD VTC  L+++ CK+G   +A+++   M ++ L  +  TY  LI  
Sbjct: 419 RELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRA 478

Query: 418 FCKAKEM 424
             K+ ++
Sbjct: 479 MYKSGKI 485



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 105/364 (28%), Positives = 168/364 (46%), Gaps = 2/364 (0%)

Query: 133 LSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMV 192
            + L+  ++ L+       V  ++      P     + L+N L  +       + + +MV
Sbjct: 122 FNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMV 181

Query: 193 QLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHY 252
             G   N+H YN +I   CK         LL +M+    R D+  YNT+I   CK  +  
Sbjct: 182 ASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVS 241

Query: 253 EALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGAT--PNHVTYTTLI 310
           EAL +   ++ +G+ PD+ TY+ L+HG C   +  EA  LF ++      P+ VT+  L+
Sbjct: 242 EALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILV 301

Query: 311 DGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIA 370
           D  C+   L EA  + ++M  KGV P   TYNS++   C + ++ +A  + + M  K   
Sbjct: 302 DKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCM 361

Query: 371 PDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL 430
           P+ V+ N LIN YCK      A ++ + M   GL+ + F Y  LI G C+A     A+EL
Sbjct: 362 PNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEAREL 421

Query: 431 LFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCK 490
              M   G SP   + + L+D  C     +  L+L        L  ++  Y  LIR   K
Sbjct: 422 FKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAMYK 481

Query: 491 KEKV 494
             K+
Sbjct: 482 SGKI 485



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 90/316 (28%), Positives = 160/316 (50%), Gaps = 2/316 (0%)

Query: 226 MEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGR 285
           +E   +  D+F +N LI  + +      A +V  ++ + G  PD VT++SLI+G C E +
Sbjct: 110 IELLRIERDVFHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDK 169

Query: 286 MREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNS 343
              A   F ++   G  PN  TY T+I G+C+      A+ L + M   G  P +V YN+
Sbjct: 170 FARAMEFFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNT 229

Query: 344 ILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAG 403
           I+  LCK+  + +A  + +E+  K + PD  T + L++  C       A  + N M+   
Sbjct: 230 IIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLN 289

Query: 404 LMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALL 463
           +M D  T+  L+   CK   +  A+ ++  M++ G  P+Y +Y+ L++GYC +N      
Sbjct: 290 IMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEAR 349

Query: 464 KLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAY 523
            + D  +++G   +V  Y  LI  +CK +++D A+ LF+ M   G++ ++  Y +L    
Sbjct: 350 MVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGL 409

Query: 524 WRAGEPKACSDILDDM 539
            +AG      ++  DM
Sbjct: 410 CQAGRHCEARELFKDM 425



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 69/284 (24%), Positives = 117/284 (41%), Gaps = 2/284 (0%)

Query: 297 KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRD 356
           K   P  V +  L+    R       L L + +    +   V  +N ++    +  R+  
Sbjct: 78  KHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFNILINCFSRLQRVDF 137

Query: 357 ANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIH 416
           A  +L ++ +    PD VT ++LIN  C     A AM+  + M+ +G   +  TY  +I 
Sbjct: 138 AFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIK 197

Query: 417 GFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCV 476
           GFCK  +  +A  LL  M  AG  P    Y+ ++DG C        L +  E   +G+  
Sbjct: 198 GFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRP 257

Query: 477 DVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDIL 536
           DV  Y  L+   C  ++ + A  LFN M    I+ D V +  L     + G       I+
Sbjct: 258 DVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGII 317

Query: 537 DDMYRRRLMITLKIYRSFSASYAKDNEILD--LFWSHVVDRGLM 578
             M  + +      Y S    Y   N++ +  + +  ++ +G M
Sbjct: 318 KIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCM 361



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 47/174 (27%), Positives = 80/174 (45%)

Query: 346 RKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLM 405
           +K C    I DA    N M  K   P  V  + L++A  +I    + + +  R+    + 
Sbjct: 57  QKGCSLTNIEDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIE 116

Query: 406 LDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKL 465
            D F +  LI+ F + + +D A  +L  ++  GF P   ++S L++G C ++     ++ 
Sbjct: 117 RDVFHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEF 176

Query: 466 LDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
            DE V+ G   ++  Y  +I+ FCK  K   A  L   M   G   D VIY ++
Sbjct: 177 FDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTI 230


>gi|125559559|gb|EAZ05095.1| hypothetical protein OsI_27286 [Oryza sativa Indica Group]
          Length = 551

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 113/371 (30%), Positives = 193/371 (52%), Gaps = 2/371 (0%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           Q+ D+M  H +  +      LL++  +++  D V ++ K M   G+   +  Y +L+   
Sbjct: 164 QLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVDGL 223

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
             + D+ KVE +  EM+ K++  D++ Y+++I  YC+ G    A  V D     GI P+ 
Sbjct: 224 SAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNE 283

Query: 271 VTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
            TY +LI+GFC+ G+M  A  L  D  ++G   N + + T+IDGYCR N +++AL ++ +
Sbjct: 284 HTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMI 343

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M   G+   V TYN++   L +  R+ +A  LL  M EK + P++V+  TLI+ +C  GD
Sbjct: 344 MEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGD 403

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
              A ++   M   G      TY  ++ G+ K   +  A+     M   G  P   SY+ 
Sbjct: 404 MVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKKEMEKKGLVPDIYSYAA 463

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG 508
           LV G+C     +  L+L +E   RG   ++  Y ALI    K+ + + A +L++ M G+G
Sbjct: 464 LVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDG 523

Query: 509 ILGDSVIYTSL 519
           +  D  +Y++L
Sbjct: 524 LTPDDALYSAL 534



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 94/368 (25%), Positives = 175/368 (47%), Gaps = 2/368 (0%)

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER 263
           +V++   CKS  V    +LL EM    V+ +   YN+L+  Y ++        +   ME 
Sbjct: 147 SVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMEN 206

Query: 264 EGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGA--TPNHVTYTTLIDGYCRANDLEE 321
           EGI P + TY  L+ G      + +   +F ++K    + +   Y+++I+ YCRA ++  
Sbjct: 207 EGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRR 266

Query: 322 ALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
           A  + +     G+ P   TY +++   CK G++  A  L+ +M  + +  + +  NT+I+
Sbjct: 267 ASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMID 326

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
            YC+      A+++K  M + G+ LD +TY  L  G  +A  MD AK LL  M++ G  P
Sbjct: 327 GYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRP 386

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
           ++ SY+ L+  +CN+ +     +L  E    G    +  Y  ++  + KK  +  A+R  
Sbjct: 387 NHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFK 446

Query: 502 NLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKD 561
             M+  G++ D   Y +L + +   G+      + ++M +R     L  Y +  +  AK+
Sbjct: 447 KEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKE 506

Query: 562 NEILDLFW 569
               + F 
Sbjct: 507 GRSEEAFQ 514



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 90/312 (28%), Positives = 150/312 (48%), Gaps = 37/312 (11%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           VF++M+  NL   ++  + ++N+  +        +V+ + V  G+  N H Y  LI+  C
Sbjct: 235 VFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFC 294

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           K   ++  E L+ +M+ + V  +   +NT+I  YC+K M  +AL ++  ME+ GI  D+ 
Sbjct: 295 KIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVY 354

Query: 272 TYNSLIHGF-----------------------------------CREGRMREARRLFRDI 296
           TYN+L  G                                    C EG M EARRLFR++
Sbjct: 355 TYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREM 414

Query: 297 --KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRI 354
              GA P+ VTY  ++DGY +   + EA R ++ M  KG+ P + +Y +++   C  G++
Sbjct: 415 AGNGAEPSLVTYNVMMDGYIKKGSIREAERFKKEMEKKGLVPDIYSYAALVHGHCVNGKV 474

Query: 355 RDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKAL 414
             A RL  EM ++   P+ V    LI+   K G +  A ++ + ML  GL  D   Y AL
Sbjct: 475 DVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSAL 534

Query: 415 IHGFCKAKEMDI 426
           +      K+ ++
Sbjct: 535 VGSLHTDKKQNV 546



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 66/222 (29%), Positives = 104/222 (46%), Gaps = 2/222 (0%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N  V + ++  Y    M    L++   M    +   ++    L   L +    D    + 
Sbjct: 317 NQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLL 376

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
           + M++ GV  N   Y  LI   C   D+ +  +L  EM        L TYN ++  Y KK
Sbjct: 377 RIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKK 436

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTY 306
           G   EA   +  ME++G+ PDI +Y +L+HG C  G++  A RLF ++K  G+ PN V Y
Sbjct: 437 GSIREAERFKKEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAY 496

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
           T LI G  +    EEA +L + M   G+ P    Y++++  L
Sbjct: 497 TALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALVGSL 538



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 107/221 (48%), Gaps = 12/221 (5%)

Query: 371 PDNVT---CNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIA 427
           PD+VT    + +++ YCK G  A A ++ + M   G+ ++   Y +L+  + + K+ D  
Sbjct: 138 PDSVTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRV 197

Query: 428 KELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRR 487
            E+L  M + G  P+  +Y+ LVDG     +   +  + +E  S+ L  DV  Y ++I  
Sbjct: 198 AEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINA 257

Query: 488 FCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMIT 547
           +C+   V  A  +F+   GNGI  +   Y +L   + + G+ +A   ++ DM  R + I 
Sbjct: 258 YCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGIN 317

Query: 548 LKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKEMQL 588
             ++ +    Y + N         +VD+ L  K I ++M +
Sbjct: 318 QIVFNTMIDGYCRKN---------MVDKALEIKMIMEKMGI 349


>gi|414875533|tpg|DAA52664.1| TPA: hypothetical protein ZEAMMB73_493958 [Zea mays]
          Length = 688

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 152/572 (26%), Positives = 239/572 (41%), Gaps = 83/572 (14%)

Query: 56  IPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSV 115
           +P L+   F+WAE+    +  S  +   ++  L +  H ++A  +  +    D L     
Sbjct: 52  LPGLARQLFRWAETTPCGFPRSASAFAAVLIPLARANHIRAAYPVSLRALHLDLLLPLVS 111

Query: 116 LNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDG---------LQVFDQMRVHNLMPHLH 166
           L +   +   P     +L  L   Y+     +D          L  F +M  H + P + 
Sbjct: 112 LLS-APLSTAPRSLLSLLLRLSTKYSKECKARDATLDTCSTLCLSAFREMASHGVAPDVK 170

Query: 167 ACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEM 226
            C  +L +L      D +  V+++M+QLG+  +I  YN L+ +  K    DKV  LL EM
Sbjct: 171 DCNHVLRALRDAARWDDICAVHEEMLQLGIEPSIVTYNTLLDSFLKEGRKDKVAMLLKEM 230

Query: 227 EFK-------DV-----------------------------RADLFTYNTLIALYCKKGM 250
           E +       DV                             +A  FTYN LI     +G 
Sbjct: 231 ETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSKKASSFTYNPLITGLLARGC 290

Query: 251 HYEALAVQDRMEREGISP-----------------------------------DIVTYNS 275
             +   +Q  ME EGI P                                   D++TYNS
Sbjct: 291 VKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNS 350

Query: 276 LIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKG 333
           L++G+C+ G ++EA  LF D++  G  P  +TY   IDGYCR  DLEEA  L+E M  +G
Sbjct: 351 LLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYCRLGDLEEARILKEEMGEQG 410

Query: 334 VYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAM 393
             P V TY  +++       +  A    +EM  K + PD    NT I A   +GD A A+
Sbjct: 411 CLPNVCTYTILMKGSLNVCSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARAL 470

Query: 394 KVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGY 453
           +++  ++  G+  D  TY  LIHG CK   +  AKEL   M+  G  P   +Y+ L+  +
Sbjct: 471 ELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAH 530

Query: 454 CNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDS 513
           C +       K+ +  +S GL      +  +I  +C++  +  A   F  M   G+  + 
Sbjct: 531 CERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNE 590

Query: 514 VIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
           + Y  L +A  R G  +  S    +M  R L+
Sbjct: 591 ITYNVLIHALCRMGRTQLASHHFHEMLERGLV 622



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 113/380 (29%), Positives = 175/380 (46%), Gaps = 40/380 (10%)

Query: 184 VWKVYKKMVQL---GVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNT 240
           V KVY   +++   G++  +  YN +IH   +S  V+  +    EM    +  D+ TYN+
Sbjct: 291 VKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNS 350

Query: 241 LIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KG 298
           L+  YCK G   EAL +   + R G++P ++TYN  I G+CR G + EAR L  ++  +G
Sbjct: 351 LLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYCRLGDLEEARILKEEMGEQG 410

Query: 299 ATPNHVTYTTLIDGY------------------------CRA-----------NDLEEAL 323
             PN  TYT L+ G                         C A            D+  AL
Sbjct: 411 CLPNVCTYTILMKGSLNVCSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARAL 470

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
            LREV+  +G+    VTYN ++  LCK G ++DA  L  +M    + PD +T   LI+A+
Sbjct: 471 ELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAH 530

Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY 443
           C+ G    A K+ N M+  GL+    T+  +IH +C+   +  A      ML+ G  P+ 
Sbjct: 531 CERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNE 590

Query: 444 CSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNL 503
            +Y+ L+   C     +       E + RGL  +   Y  LI   CK    + A R +  
Sbjct: 591 ITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFE 650

Query: 504 MQGNGILGDSVIYTSLAYAY 523
           M  NGI  D + + +L   +
Sbjct: 651 MHQNGIHPDYLTHKALVKGF 670



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 93/378 (24%), Positives = 172/378 (45%), Gaps = 40/378 (10%)

Query: 151 QVFD---QMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           +V+D   +M    +MP +     +++ L +  L +     + +M  +G++ ++  YN L+
Sbjct: 293 KVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLL 352

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           +  CK+ ++ +   L  ++    +   + TYN  I  YC+ G   EA  +++ M  +G  
Sbjct: 353 NGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYCRLGDLEEARILKEEMGEQGCL 412

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRD-------------------------------- 295
           P++ TY  L+ G      +  AR  F +                                
Sbjct: 413 PNVCTYTILMKGSLNVCSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARALEL 472

Query: 296 -----IKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
                ++G + + VTY  LI G C+  +L++A  L+  M + G+ P  +TY  ++   C+
Sbjct: 473 REVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCE 532

Query: 351 EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
            G +R+A ++ N M    + P  VT   +I+AYC+ G+  SA     +MLE G+  ++ T
Sbjct: 533 RGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEIT 592

Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFV 470
           Y  LIH  C+     +A      ML+ G   +  +Y+ L+DG C   N E  ++   E  
Sbjct: 593 YNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMH 652

Query: 471 SRGLCVDVSVYRALIRRF 488
             G+  D   ++AL++ F
Sbjct: 653 QNGIHPDYLTHKALVKGF 670



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 85/281 (30%), Positives = 141/281 (50%), Gaps = 2/281 (0%)

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
           Y  L   ++   + ++M     +P++   T+L+          M  + + +M+  G+  +
Sbjct: 390 YCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVCSLAMAREFFDEMLSKGLQPD 449

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
              YN  I A     D+ +  +L   +  + + +D  TYN LI   CK G   +A  +Q 
Sbjct: 450 CFAYNTRICAELILGDIARALELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQM 509

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRAN 317
           +M   G+ PD +TY  LIH  C  G +REAR++F ++   G  P+ VT+T +I  YCR  
Sbjct: 510 KMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRG 569

Query: 318 DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCN 377
           +L  A      M  +GV P  +TYN ++  LC+ GR + A+   +EM E+ +  +  T  
Sbjct: 570 NLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYT 629

Query: 378 TLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGF 418
            LI+  CK+G+   AM+    M + G+  D  T+KAL+ GF
Sbjct: 630 LLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALVKGF 670


>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
          Length = 818

 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 116/373 (31%), Positives = 180/373 (48%), Gaps = 10/373 (2%)

Query: 148 DGLQVFDQMRVHNL--MPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNV 205
           + L +FD M        P +  C +L+  L  D       +V+     LG  A +  YN 
Sbjct: 168 EALVLFDSMASGGGRNCPPVVPCNILIKRLCSDGRVSDAERVF---AALGPSATVVTYNT 224

Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
           +++  C++  ++   +L+  M F     D FT+N LI   C +G   +ALAV D M   G
Sbjct: 225 MVNGYCRAGRIEDARRLINGMPFP---PDTFTFNPLIRALCVRGRIPDALAVFDDMLHRG 281

Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEAL 323
            SP +VTY+ L+   C+E   R+A  L  ++  KG  P+ VTY  LI+  C   D++EAL
Sbjct: 282 CSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEAL 341

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
            +   + + G  P  VTY  +L+ LC   R ++   LL EM     APD VT NT++ + 
Sbjct: 342 NILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSL 401

Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY 443
           C+ G    A++V + M E G + D  TY +++ G C    +D A ELL  +   G  P  
Sbjct: 402 CQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDT 461

Query: 444 CSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNL 503
            +Y+ ++ G C+    E   +L+ E +      D   +  ++   C+K  VD A R+   
Sbjct: 462 IAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQ 521

Query: 504 MQGNGILGDSVIY 516
           M  NG   D V Y
Sbjct: 522 MSENGCSPDIVTY 534



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 129/495 (26%), Positives = 213/495 (43%), Gaps = 45/495 (9%)

Query: 129 NSHVLSWLVIFYANLKMT--QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWK 186
           +  V+++ ++  A  K +  +  + + D+MR     P +    VL+N++  +   D    
Sbjct: 283 SPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALN 342

Query: 187 VYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYC 246
           +   +   G   +   Y  ++ + C S    +VE+LL EM   +   D  T+NT++   C
Sbjct: 343 ILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLC 402

Query: 247 KKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHV 304
           ++G+   A+ V D M   G   DIVTY+S++ G C  GR+ +A  L   +K  G  P+ +
Sbjct: 403 QQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTI 462

Query: 305 TYTTLIDGYC------RANDL-----------------------------EEALRLREVM 329
            YTT++ G C      RA +L                             + A+R+ E M
Sbjct: 463 AYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQM 522

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
           +  G  P +VTYN I+  LC E  I DA  LL+++      PD VT NTL+   C +   
Sbjct: 523 SENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRW 582

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
             A ++   M+ +    D+ T+  +I   C+   +  A E L  M + G  P+  +YS +
Sbjct: 583 EDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIV 642

Query: 450 VDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGI 509
           VD        +A L+LL    +     D+  Y  +I    K  K++ A  L  +M  NG+
Sbjct: 643 VDALLKAGKAQAALELLSGMTNGT--PDLITYNTVISNLTKAGKMEEALDLLRVMVSNGL 700

Query: 510 LGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI---LD 566
             D+  Y SLAY   R         +L  +    L      Y      + +D      +D
Sbjct: 701 CPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLGFCRDRRTDLAID 760

Query: 567 LFWSHVVDRGLMSKH 581
            F +H+V  G M   
Sbjct: 761 CF-AHMVSSGCMPDE 774



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 112/424 (26%), Positives = 189/424 (44%), Gaps = 3/424 (0%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D L VFD M      P +   ++LL++  K+        +  +M   G   +I  YNVLI
Sbjct: 269 DALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLI 328

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           +A C   DVD+   +L  +     + D  TY  ++   C      E   +   M     +
Sbjct: 329 NAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCA 388

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRL 325
           PD VT+N+++   C++G +  A  +   +   G   + VTY++++DG C    +++A+ L
Sbjct: 389 PDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVEL 448

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
              + + G  P  + Y ++L+ LC   +   A  L+ EM      PD VT NT++ + C+
Sbjct: 449 LSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQ 508

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            G    A++V  +M E G   D  TY  +I G C    +D A ELL  +   G  P   +
Sbjct: 509 KGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVT 568

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           ++ L+ G C  +  E   +L+   +      D   +  +I   C+K  +  A     +M 
Sbjct: 569 FNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMA 628

Query: 506 GNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL-MITLKIYRSFSASYAKDNEI 564
            NG + +S  Y+ +  A  +AG+ +A  ++L  M      +IT     S      K  E 
Sbjct: 629 ENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMTNGTPDLITYNTVISNLTKAGKMEEA 688

Query: 565 LDLF 568
           LDL 
Sbjct: 689 LDLL 692



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 107/409 (26%), Positives = 178/409 (43%), Gaps = 35/409 (8%)

Query: 149 GLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIH 208
            ++V D M  H  +  +   + +L+ L      D   ++  ++   G   +   Y  ++ 
Sbjct: 410 AIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLK 469

Query: 209 ACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISP 268
             C +   ++ E+L+ EM   D   D  T+NT++A  C+KG+   A+ V ++M   G SP
Sbjct: 470 GLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSP 529

Query: 269 DIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLR 326
           DIVTYN +I G C E  + +A  L  D++  G  P+ VT+ TL+ G C  +  E+A +L 
Sbjct: 530 DIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLM 589

Query: 327 EVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI----------------- 369
             M      P  +T+N+++  LC++G +  A   L  M E                    
Sbjct: 590 ANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKA 649

Query: 370 ----------------APDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKA 413
                            PD +T NT+I+   K G    A+ +   M+  GL  D  TY++
Sbjct: 650 GKAQAALELLSGMTNGTPDLITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRS 709

Query: 414 LIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
           L +G C+    D A  +L  + D G SP    Y+ ++ G+C     +  +      VS G
Sbjct: 710 LAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSG 769

Query: 474 LCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYA 522
              D S Y  L+        +D A+RL   +   G+L   +I     Y+
Sbjct: 770 CMPDESTYVILLEALAYGGLLDEAKRLLASLCSLGVLDKKLIEEESHYS 818



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 83/310 (26%), Positives = 122/310 (39%), Gaps = 41/310 (13%)

Query: 247 KKGMHYEALAVQDRMEREGI--SPDIVTYNSLIHGFCREGRMREARRLFRDIKGATPNHV 304
           ++G   EAL + D M   G    P +V  N LI   C +GR+ +A R+F           
Sbjct: 162 QRGEIDEALVLFDSMASGGGRNCPPVVPCNILIKRLCSDGRVSDAERVF----------- 210

Query: 305 TYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM 364
                                    AA G    VVTYN+++   C+ GRI DA RL+N M
Sbjct: 211 -------------------------AALGPSATVVTYNTMVNGYCRAGRIEDARRLINGM 245

Query: 365 NEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEM 424
                 PD  T N LI A C  G    A+ V + ML  G      TY  L+   CK    
Sbjct: 246 ---PFPPDTFTFNPLIRALCVRGRIPDALAVFDDMLHRGCSPSVVTYSILLDATCKESGY 302

Query: 425 DIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRAL 484
             A  LL  M   G  P   +Y+ L++  CN+ + +  L +L    S G   D   Y  +
Sbjct: 303 RQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPV 362

Query: 485 IRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL 544
           ++  C  E+    + L   M  N    D V + ++  +  + G      +++D M     
Sbjct: 363 LKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGC 422

Query: 545 MITLKIYRSF 554
           +  +  Y S 
Sbjct: 423 VADIVTYSSI 432


>gi|357145546|ref|XP_003573680.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 739

 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 119/422 (28%), Positives = 203/422 (48%), Gaps = 4/422 (0%)

Query: 108 DFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHA 167
           D  ++   L++L++    PD  SH  +  V+ Y    +     ++F  M +   +     
Sbjct: 87  DLPASKRHLSSLLRAGFAPD--SHAYTSFVVGYCRAGLLAHACRLFVLMPLRGCVRTAFT 144

Query: 168 CTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEME 227
            T LL+ L    +      V+  M   G   + H+Y  ++H  C +    + E LL +  
Sbjct: 145 YTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAM 204

Query: 228 FKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMR 287
            +    ++  YN LI  YC  G    A+ V +RM+  G SP++ TY  LI GFC+  ++ 
Sbjct: 205 AEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLD 264

Query: 288 EARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSIL 345
            A  LF  +   G  PN VTYT LI G C    L+ A RL + M   G+ P   T + ++
Sbjct: 265 RAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLI 324

Query: 346 RKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLM 405
             LCK  R+ +A  LL  + +K I  + +   +LI+  CK G  A+A ++   ++  G +
Sbjct: 325 DALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFV 384

Query: 406 LDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKL 465
            D  TY +LI G C+ KE+  A  +L  M++ G  PS  +Y+ ++D    +   +   K+
Sbjct: 385 PDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKI 444

Query: 466 LDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWR 525
           LD+ ++ G+  DV  Y   +R +C + +++ A+ +   M  +G+  + V Y +L   Y  
Sbjct: 445 LDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYAN 504

Query: 526 AG 527
            G
Sbjct: 505 LG 506



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 123/493 (24%), Positives = 212/493 (43%), Gaps = 25/493 (5%)

Query: 88  LTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQ 147
           L +++     ++   ++  R+  +  +++NA     D P    H+ S L   +A      
Sbjct: 51  LARHRMLADMESFASRMPARNLRTYTTLINAYCLAGDLPASKRHLSSLLRAGFA------ 104

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
                          P  HA T  +    +  L     +++  M   G V     Y  L+
Sbjct: 105 ---------------PDSHAYTSFVVGYCRAGLLAHACRLFVLMPLRGCVRTAFTYTALL 149

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           H  C +  V +   +   M+      D   Y T++   C  G   EA  +      EG  
Sbjct: 150 HGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFE 209

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFR--DIKGATPNHVTYTTLIDGYCRANDLEEALRL 325
           P++V YN+LI G+C  G +  A  +F   D+ G +PN  TYT LI G+C++  L+ A+ L
Sbjct: 210 PNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMML 269

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
              M   G+ P VVTY ++++  C +G++  A RLL  M    + P+  TC+ LI+A CK
Sbjct: 270 FSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCK 329

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
                 A  +   +++ G+ +++  Y +LI G CKA     A  L+  ++  GF P   +
Sbjct: 330 HERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHT 389

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           YS L+DG C +      + +LD+ + +G+      Y  +I    ++   D ++++ + M 
Sbjct: 390 YSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMI 449

Query: 506 GNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEIL 565
             GI  D   YT    +Y   G  +    ++  M    +   L  Y +    YA      
Sbjct: 450 AAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTS 509

Query: 566 DLF--WSHVVDRG 576
             F  + H+V  G
Sbjct: 510 QAFSTFKHMVANG 522



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 113/393 (28%), Positives = 177/393 (45%), Gaps = 4/393 (1%)

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
             +++ G   + H Y   +   C++  +    +L   M  +      FTY  L+   C  
Sbjct: 96  SSLLRAGFAPDSHAYTSFVVGYCRAGLLAHACRLFVLMPLRGCVRTAFTYTALLHGLCGA 155

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTY 306
           GM  EA++V   M+ +G +PD   Y +++HG C  GR REA  L  D   +G  PN V Y
Sbjct: 156 GMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVY 215

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
             LIDGYC   DLE A+ + E M   G  P V TY  ++   CK  ++  A  L + M +
Sbjct: 216 NALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVD 275

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
             + P+ VT   LI   C  G    A ++   M  +GL+ +++T   LI   CK + +  
Sbjct: 276 AGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGE 335

Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
           A+ LL  ++  G   +   Y+ L+DG C      A  +L+   VS+G   D   Y +LI 
Sbjct: 336 AQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLID 395

Query: 487 RFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMI 546
             C+++++  A  + + M   G+    V YT +     R         ILD M    +  
Sbjct: 396 GLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKP 455

Query: 547 TLKIYRSFSASYAKDNEILDL--FWSHVVDRGL 577
            +  Y  F  SY  +  + D      H+VD G+
Sbjct: 456 DVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGV 488



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 111/369 (30%), Positives = 173/369 (46%), Gaps = 7/369 (1%)

Query: 221 KLLCEMEFKDVRA---DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLI 277
           ++L +ME    R    +L TY TLI  YC  G    +      + R G +PD   Y S +
Sbjct: 55  RMLADMESFASRMPARNLRTYTTLINAYCLAGDLPASKRHLSSLLRAGFAPDSHAYTSFV 114

Query: 278 HGFCREGRMREARRLF--RDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVY 335
            G+CR G +  A RLF    ++G      TYT L+ G C A  + EA+ +   M A G  
Sbjct: 115 VGYCRAGLLAHACRLFVLMPLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCA 174

Query: 336 PGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKV 395
           P    Y +++  LC  GR R+A  LL++   +   P+ V  N LI+ YC +GD   A+ V
Sbjct: 175 PDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDV 234

Query: 396 KNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCN 455
             RM   G   +  TY  LI GFCK++++D A  L   M+DAG  P+  +Y+ L+ G C+
Sbjct: 235 FERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCS 294

Query: 456 KNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVI 515
               +   +LL    + GL  +      LI   CK E+V  AQ L   +   GI  + ++
Sbjct: 295 DGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIV 354

Query: 516 YTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD--LFWSHVV 573
           YTSL     +AG   A   ++  +  +  +     Y S      +  E+ +  L    ++
Sbjct: 355 YTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMM 414

Query: 574 DRGLMSKHI 582
           ++G+    +
Sbjct: 415 EKGVQPSPV 423



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 119/483 (24%), Positives = 202/483 (41%), Gaps = 68/483 (14%)

Query: 145 MTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYN 204
           M ++ + VF  M+     P  H    +++ L     T     +    +  G   N+ +YN
Sbjct: 157 MVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYN 216

Query: 205 VLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMERE 264
            LI   C   D++    +   M+      ++ TY  LI+ +CK      A+ +  RM   
Sbjct: 217 ALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDA 276

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDI---------------------------- 296
           G+ P++VTY +LI G C +G++  A RL + +                            
Sbjct: 277 GLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEA 336

Query: 297 ---------KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRK 347
                    KG   N + YT+LIDG C+A     A RL + + ++G  P   TY+S++  
Sbjct: 337 QLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDG 396

Query: 348 LCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLD 407
           LC++  + +A  +L++M EK + P  VT   +I+   +      + K+ ++M+ AG+  D
Sbjct: 397 LCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPD 456

Query: 408 QFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLD 467
            FTY   +  +C    M+ A+ ++  M+D G  P+  +Y+ L+ GY N            
Sbjct: 457 VFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFK 516

Query: 468 EFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
             V+ G   +   Y  L+R   KKE              N I  +SV       + W+  
Sbjct: 517 HMVANGCKPNEESYTVLLRLLIKKES------------SNNIPANSV-------SIWKIA 557

Query: 528 EPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKEMQ 587
           E K    +L++M + +L   + IY  F  S  +            VDR   +K +  EMQ
Sbjct: 558 EMKYLHGLLEEMVKLQLPSEIDIYNCFLTSLCR------------VDRLDEAKILLIEMQ 605

Query: 588 LRN 590
             N
Sbjct: 606 SAN 608



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 138/575 (24%), Positives = 223/575 (38%), Gaps = 105/575 (18%)

Query: 81  HWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFY 140
           + TM+H L      + A+ +L       F     V NAL+      DG           Y
Sbjct: 180 YATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALI------DG-----------Y 222

Query: 141 ANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANI 200
            N+   +  + VF++M V+   P++   T L++   K R  D    ++ +MV  G+V N+
Sbjct: 223 CNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNV 282

Query: 201 HLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDR 260
             Y  LI   C    +D   +LL  ME   +  + +T + LI   CK     EA  +   
Sbjct: 283 VTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGS 342

Query: 261 MEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRAND 318
           + ++GI  + + Y SLI G C+ GR   A RL + +  +G  P+  TY++LIDG CR  +
Sbjct: 343 LIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKE 402

Query: 319 LEEALRL------------------------REV-----------MAAKGVYPGVVTYNS 343
           L EA+ +                        REV           M A G+ P V TY  
Sbjct: 403 LSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTI 462

Query: 344 ILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAG 403
            +R  C EGR+ DA  ++  M +  + P+ VT N LI  Y  +G T+ A      M+  G
Sbjct: 463 FVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANG 522

Query: 404 LMLDQFTYKALI----------------------------HGF----------------- 418
              ++ +Y  L+                            HG                  
Sbjct: 523 CKPNEESYTVLLRLLIKKESSNNIPANSVSIWKIAEMKYLHGLLEEMVKLQLPSEIDIYN 582

Query: 419 ------CKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSR 472
                 C+   +D AK LL  M  A  +PS   Y+ ++   C        L  +D  V  
Sbjct: 583 CFLTSLCRVDRLDEAKILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKS 642

Query: 473 GLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKAC 532
           G    +  YR +I   C++  +  A+++F  M       + + +  L     + G    C
Sbjct: 643 GYIPQLESYRHIISSLCEEGSIQTAKQVFGDMLSKEYNYEEIAWRILIDGLLQKGYVAEC 702

Query: 533 SDILDDMYRRRLMITLKIYRSFSASYAKDNEILDL 567
           S +L  M  +    +  +Y   +      N+I ++
Sbjct: 703 SSLLSVMEEKNYRPSDALYARLTGKITDANDIQEI 737


>gi|270342070|gb|ACZ74655.1| hypothetical protein [Phaseolus vulgaris]
 gi|270342076|gb|ACZ74661.1| hypothetical protein [Phaseolus vulgaris]
          Length = 485

 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 117/415 (28%), Positives = 203/415 (48%), Gaps = 37/415 (8%)

Query: 111 STPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTV 170
           S   +   LV+  +D + N  +   LV  Y  + M +  L+ F +     L+P++ AC  
Sbjct: 20  SNEGIYENLVRCTEDCNWNPVIFDMLVKAYVKVGMVEKALETFRRNIETRLIPNVIACNC 79

Query: 171 LLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKD 230
           LL+ L++       W+VY +M +LGV  N + +N++ H   K  D DKV   L +ME + 
Sbjct: 80  LLSGLSRFNYITQCWEVYAEMGRLGVQRNAYTFNIMTHVLSKDGDTDKVTGFLEKMEEEG 139

Query: 231 VRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREAR 290
              DL TYNTL+  YCKK    +A  +   M   G+ P+++TY +L++G C EG+++EA 
Sbjct: 140 FEPDLVTYNTLVNSYCKKRRLEDAFYLYKIMYVRGVMPNLITYTTLMNGLCEEGKVKEAH 199

Query: 291 RLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
           +LF  +  +G  P+ V+Y TL+ GYCR  +++                           +
Sbjct: 200 QLFHQMVHRGIAPDIVSYNTLVCGYCRHGEMQ---------------------------M 232

Query: 349 CKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ 408
           C+         +L EM   +I PD++TC  +++ Y + G   SA+     +    + + +
Sbjct: 233 CRS--------ILYEMIGNRICPDSITCRVIVDGYARDGKLLSALNTVEELKRFRMKIPE 284

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
             Y  L+   CK  +   A+  L  + + G++P   +Y+ LV+  C  NNEE  L L  +
Sbjct: 285 EVYDYLVVALCKEGKPFAARSFLHRISEDGYTPKMNTYNKLVESLCEFNNEEEALILKSD 344

Query: 469 FVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAY 523
             ++ + V+ + YRA+I   C+ ++   A+ L   + G+ +L D  I  +L   Y
Sbjct: 345 MENKSMKVNAAAYRAVIICLCRVKRTVEAEVLLEEIIGSDMLPDVEISRALIKGY 399



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 93/397 (23%), Positives = 164/397 (41%), Gaps = 54/397 (13%)

Query: 66  WAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDD 125
           +AE      + +  +   M H+L+K+         LEK+    F               +
Sbjct: 97  YAEMGRLGVQRNAYTFNIMTHVLSKDGDTDKVTGFLEKMEEEGF---------------E 141

Query: 126 PDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVW 185
           PD  ++  + LV  Y   +  +D   ++  M V  +MP+L   T L+N L ++       
Sbjct: 142 PDLVTY--NTLVNSYCKKRRLEDAFYLYKIMYVRGVMPNLITYTTLMNGLCEEGKVKEAH 199

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
           +++ +MV  G+  +I  YN L+   C+  ++     +L EM    +  D  T   ++  Y
Sbjct: 200 QLFHQMVHRGIAPDIVSYNTLVCGYCRHGEMQMCRSILYEMIGNRICPDSITCRVIVDGY 259

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNH 303
            + G    AL   + ++R  +      Y+ L+   C+EG+   AR     I   G TP  
Sbjct: 260 ARDGKLLSALNTVEELKRFRMKIPEEVYDYLVVALCKEGKPFAARSFLHRISEDGYTPKM 319

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
            TY  L++  C  N+ EEAL L+  M  K +      Y +++  LC+  R  +A  LL E
Sbjct: 320 NTYNKLVESLCEFNNEEEALILKSDMENKSMKVNAAAYRAVIICLCRVKRTVEAEVLLEE 379

Query: 364 MNEKKIAPDNVTCNTLINAYCK-----------------------------------IGD 388
           +    + PD      LI  YC+                                   +G+
Sbjct: 380 IIGSDMLPDVEISRALIKGYCEENKVDKAVSLLKLFAKEFQVYDTESYNAVVKVFCDVGN 439

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMD 425
               M+V++++L+ G + ++ T + +IHG  KA E+D
Sbjct: 440 VTELMEVEDKLLKVGYVPNKLTCRHVIHGLQKAMELD 476



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 80/351 (22%), Positives = 152/351 (43%), Gaps = 4/351 (1%)

Query: 205 VLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMERE 264
           V +   C SS+    E L+   E  D   +   ++ L+  Y K GM  +AL    R    
Sbjct: 11  VEVEGVCASSNEGIYENLVRCTE--DCNWNPVIFDMLVKAYVKVGMVEKALETFRRNIET 68

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
            + P+++  N L+ G  R   + +   ++ ++   G   N  T+  +     +  D ++ 
Sbjct: 69  RLIPNVIACNCLLSGLSRFNYITQCWEVYAEMGRLGVQRNAYTFNIMTHVLSKDGDTDKV 128

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
               E M  +G  P +VTYN+++   CK+ R+ DA  L   M  + + P+ +T  TL+N 
Sbjct: 129 TGFLEKMEEEGFEPDLVTYNTLVNSYCKKRRLEDAFYLYKIMYVRGVMPNLITYTTLMNG 188

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
            C+ G    A ++ ++M+  G+  D  +Y  L+ G+C+  EM + + +L+ M+     P 
Sbjct: 189 LCEEGKVKEAHQLFHQMVHRGIAPDIVSYNTLVCGYCRHGEMQMCRSILYEMIGNRICPD 248

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +   +VDGY       + L  ++E     + +   VY  L+   CK+ K   A+   +
Sbjct: 249 SITCRVIVDGYARDGKLLSALNTVEELKRFRMKIPEEVYDYLVVALCKEGKPFAARSFLH 308

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRS 553
            +  +G       Y  L  +       +    +  DM  + + +    YR+
Sbjct: 309 RISEDGYTPKMNTYNKLVESLCEFNNEEEALILKSDMENKSMKVNAAAYRA 359



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 99/227 (43%)

Query: 339 VTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNR 398
           V ++ +++   K G +  A        E ++ P+ + CN L++   +        +V   
Sbjct: 40  VIFDMLVKAYVKVGMVEKALETFRRNIETRLIPNVIACNCLLSGLSRFNYITQCWEVYAE 99

Query: 399 MLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNN 458
           M   G+  + +T+  + H   K  + D     L  M + GF P   +Y+ LV+ YC K  
Sbjct: 100 MGRLGVQRNAYTFNIMTHVLSKDGDTDKVTGFLEKMEEEGFEPDLVTYNTLVNSYCKKRR 159

Query: 459 EEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTS 518
            E    L      RG+  ++  Y  L+   C++ KV  A +LF+ M   GI  D V Y +
Sbjct: 160 LEDAFYLYKIMYVRGVMPNLITYTTLMNGLCEEGKVKEAHQLFHQMVHRGIAPDIVSYNT 219

Query: 519 LAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEIL 565
           L   Y R GE + C  IL +M   R+       R     YA+D ++L
Sbjct: 220 LVCGYCRHGEMQMCRSILYEMIGNRICPDSITCRVIVDGYARDGKLL 266



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 65/287 (22%), Positives = 121/287 (42%)

Query: 277 IHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYP 336
           + G C          L R  +    N V +  L+  Y +   +E+AL          + P
Sbjct: 13  VEGVCASSNEGIYENLVRCTEDCNWNPVIFDMLVKAYVKVGMVEKALETFRRNIETRLIP 72

Query: 337 GVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVK 396
            V+  N +L  L +   I     +  EM    +  +  T N + +   K GDT       
Sbjct: 73  NVIACNCLLSGLSRFNYITQCWEVYAEMGRLGVQRNAYTFNIMTHVLSKDGDTDKVTGFL 132

Query: 397 NRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNK 456
            +M E G   D  TY  L++ +CK + ++ A  L   M   G  P+  +Y+ L++G C +
Sbjct: 133 EKMEEEGFEPDLVTYNTLVNSYCKKRRLEDAFYLYKIMYVRGVMPNLITYTTLMNGLCEE 192

Query: 457 NNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIY 516
              +   +L  + V RG+  D+  Y  L+  +C+  ++   + +   M GN I  DS+  
Sbjct: 193 GKVKEAHQLFHQMVHRGIAPDIVSYNTLVCGYCRHGEMQMCRSILYEMIGNRICPDSITC 252

Query: 517 TSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNE 563
             +   Y R G+  +  + ++++ R R+ I  ++Y     +  K+ +
Sbjct: 253 RVIVDGYARDGKLLSALNTVEELKRFRMKIPEEVYDYLVVALCKEGK 299


>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
 gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
          Length = 497

 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 119/375 (31%), Positives = 192/375 (51%), Gaps = 6/375 (1%)

Query: 156 MRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSD 215
           MR H   P++     L++ L K+   D   ++++ M  +    ++  YN L+    ++  
Sbjct: 1   MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60

Query: 216 VDKVEKLLCEMEFKDVRA-DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYN 274
           +++   L  EM   D R+ D+ ++N L+   C+ G    AL    +M+ +  SP+++TY+
Sbjct: 61  LERAMALFQEM--LDRRSHDVISFNILVTGLCRAGKIETALEFFRKMD-DRCSPNVITYS 117

Query: 275 SLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAK 332
            LI G C+  R+ +A  L   +K  G +P+ +TYT L+DG C+ + +  A  +   M   
Sbjct: 118 VLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDA 177

Query: 333 GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
           G  P +VTYNS+L  LC+  R+ DA  L+ +M  +   P+ VT  TLI+  CK+G    A
Sbjct: 178 GCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDA 237

Query: 393 MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
             +   M++ G   D   Y  LI+G CKA ++D +  LL   +  G  P   +YS ++ G
Sbjct: 238 CAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYG 297

Query: 453 YCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGD 512
            C  N  +   +LL    SRG   DV +Y  LI   CK  KVD A  L+ +M G+G   D
Sbjct: 298 LCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDAD 357

Query: 513 SVIYTSLAYAYWRAG 527
            V Y++L     +AG
Sbjct: 358 VVTYSTLIDGLCKAG 372



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 118/438 (26%), Positives = 207/438 (47%), Gaps = 9/438 (2%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           ++F+ M+     P +     LL+ L +    +    ++++M+      ++  +N+L+   
Sbjct: 31  ELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRS-HDVISFNILVTGL 89

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           C++  ++   +   +M+ +    ++ TY+ LI   CK     +A+ + + M+  G SPD+
Sbjct: 90  CRAGKIETALEFFRKMDDR-CSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDV 148

Query: 271 VTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
           +TY  L+ G C+E ++  A  + R++   G  PN VTY +L+ G CRA  + +AL L   
Sbjct: 149 ITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRD 208

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M  +G  P VVTY +++  LCK GR++DA  +L +M +K   PD +  N LIN  CK   
Sbjct: 209 MTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQ 268

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
              ++ +  R +  G+  D  TY ++I+G C++  +D A  LL  +   G  P    YS 
Sbjct: 269 VDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYST 328

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG 508
           L+DG C     +    L +     G   DV  Y  LI   CK  +VD A  L   M   G
Sbjct: 329 LIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMG 388

Query: 509 ILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAK----DNEI 564
               ++ Y SL              +++++M R     +   Y        +    D+  
Sbjct: 389 TPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAA 448

Query: 565 LDLFWSHVVDRGLMSKHI 582
           LD ++  ++D G++  HI
Sbjct: 449 LD-YFQEMIDNGVIPDHI 465



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 114/376 (30%), Positives = 183/376 (48%), Gaps = 4/376 (1%)

Query: 121 KIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRL 180
           K+ D    N    S L+            +++ + M+     P +   T+L++ L K+  
Sbjct: 104 KMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESK 163

Query: 181 TDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNT 240
               W+V ++M+  G V N+  YN L+H  C++  V     L+ +M  +    ++ TY T
Sbjct: 164 VAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGT 223

Query: 241 LIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KG 298
           LI   CK G   +A A+   M  +G +PD++ YN LI+G C+  ++ E+  L R     G
Sbjct: 224 LIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGG 283

Query: 299 ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDAN 358
             P+ VTY+++I G CR+N L+EA RL   + ++G  P V+ Y++++  LCK G++ +A 
Sbjct: 284 IKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAF 343

Query: 359 RLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGF 418
            L   M       D VT +TLI+  CK G    A  +  RM+  G      TY +LI G 
Sbjct: 344 DLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGL 403

Query: 419 CKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNN-EEALLKLLDEFVSRGLCVD 477
           C    +D A EL+  M  +  +PS  +Y+ L+ G C     + A L    E +  G+  D
Sbjct: 404 CDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPD 463

Query: 478 VSVYRALIRRFCKKEK 493
              Y  L+    KK K
Sbjct: 464 HITYSILLEGL-KKSK 478


>gi|242046334|ref|XP_002461038.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
 gi|241924415|gb|EER97559.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
          Length = 595

 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 124/403 (30%), Positives = 203/403 (50%), Gaps = 7/403 (1%)

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
           P+  + T ++  L   R T     + + M   GV A++  Y  LI   C +S++D   +L
Sbjct: 121 PNAVSYTTVMRGLCASRRTGEAVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALEL 180

Query: 223 LCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR 282
           L EM    V+ ++  Y+ L+  YC+ G   +   V + M R GI PD++ +  LI   C+
Sbjct: 181 LDEMCGSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCK 240

Query: 283 EGRMREARRLFRDI---KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVV 339
           EG+  +A ++ +D+   +G  PN VTY  LI+  C+   + EAL LR+ M  KGV P VV
Sbjct: 241 EGKTGKAAKV-KDMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVV 299

Query: 340 TYNSILRKLCKEGRIRDANRLLNEM--NEKKIAPDNVTCNTLINAYCKIGDTASAMKVKN 397
           TYN+++  L     + +A   L EM   +  + PD VT N++I+  CKIG    A+KV+ 
Sbjct: 300 TYNTLIAGLSGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVRE 359

Query: 398 RMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKN 457
            M E G M +  TY  LI GF +  ++ +A  L+  +  +G  P   +YS L++G+    
Sbjct: 360 MMAERGCMCNLVTYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMW 419

Query: 458 NEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYT 517
             +   K L     RG+  ++  Y  L+   C++  ++ A  LFN M  N  L D++ Y+
Sbjct: 420 EVDRAEKFLCTMRQRGIKAELFHYIPLLAAMCQQGMMERAMGLFNEMDKNCGL-DAIAYS 478

Query: 518 SLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAK 560
           ++ +   ++G+ K    ++ DM    L      Y      YAK
Sbjct: 479 TMIHGACKSGDMKTVKQLIQDMLDEGLAPDAVTYSMLINMYAK 521



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 130/420 (30%), Positives = 213/420 (50%), Gaps = 12/420 (2%)

Query: 110 LSTPSVLNALVKIHDDPDG-----NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPH 164
           L   S L+A +++ D+  G     N  V S L+  Y      QD  +VF+ M    + P 
Sbjct: 168 LCDASELDAALELLDEMCGSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPD 227

Query: 165 LHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLC 224
           +   T L++ L K+  T    KV   MVQ G+  N+  YNVLI++ CK   V +   L  
Sbjct: 228 VIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRK 287

Query: 225 EMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG--ISPDIVTYNSLIHGFCR 282
           EM+ K V  D+ TYNTLIA         EA++  + M +    + PD+VT+NS+IHG C+
Sbjct: 288 EMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCK 347

Query: 283 EGRMREARRLFRDI---KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVV 339
            GRM +A ++ R++   +G   N VTY  LI G+ R + ++ A+ L + +A  G+ P   
Sbjct: 348 IGRMTQAVKV-REMMAERGCMCNLVTYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSF 406

Query: 340 TYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRM 399
           TY+ ++    K   +  A + L  M ++ I  +      L+ A C+ G    AM + N M
Sbjct: 407 TYSILINGFSKMWEVDRAEKFLCTMRQRGIKAELFHYIPLLAAMCQQGMMERAMGLFNEM 466

Query: 400 LEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNE 459
            +    LD   Y  +IHG CK+ +M   K+L+  MLD G +P   +YS L++ Y    + 
Sbjct: 467 -DKNCGLDAIAYSTMIHGACKSGDMKTVKQLIQDMLDEGLAPDAVTYSMLINMYAKLGDL 525

Query: 460 EALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
           E   ++L +  + G   DV+V+ +LI+ +  + + D   +L + M+   +  D  I +++
Sbjct: 526 EEAERVLKQMTASGFVPDVAVFDSLIKGYSAEGQTDKVLKLIHEMRAKNVAFDPKIISTI 585



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 128/481 (26%), Positives = 220/481 (45%), Gaps = 24/481 (4%)

Query: 106 LRDFLSTPSVLNALVKIHDD-----------------PDGNSHVLSWLVIFYA--NLKMT 146
           +RD +S  +VL AL +   D                 P    + +S+  +       + T
Sbjct: 80  VRDAVSYNTVLAALCRRGGDHLRQARSLLVDMSREAHPAARPNAVSYTTVMRGLCASRRT 139

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
            + + +   M+   +   +     L+  L      D   ++  +M   GV  N+ +Y+ L
Sbjct: 140 GEAVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVYSCL 199

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           +   C+S     V K+  +M  + ++ D+  +  LI   CK+G   +A  V+D M + G+
Sbjct: 200 LRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGL 259

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
            P++VTYN LI+  C+EG +REA  L +++  KG  P+ VTY TLI G     +++EA+ 
Sbjct: 260 EPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMS 319

Query: 325 LREVMAAKG--VYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
             E M      V P VVT+NS++  LCK GR+  A ++   M E+    + VT N LI  
Sbjct: 320 FLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNYLIGG 379

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           + ++     AM + + +  +GL  D FTY  LI+GF K  E+D A++ L  M   G    
Sbjct: 380 FLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQRGIKAE 439

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
              Y  L+   C +   E  + L +E   +   +D   Y  +I   CK   +   ++L  
Sbjct: 440 LFHYIPLLAAMCQQGMMERAMGLFNEM-DKNCGLDAIAYSTMIHGACKSGDMKTVKQLIQ 498

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDN 562
            M   G+  D+V Y+ L   Y + G+ +    +L  M     +  + ++ S    Y+ + 
Sbjct: 499 DMLDEGLAPDAVTYSMLINMYAKLGDLEEAERVLKQMTASGFVPDVAVFDSLIKGYSAEG 558

Query: 563 E 563
           +
Sbjct: 559 Q 559



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 100/321 (31%), Positives = 163/321 (50%), Gaps = 10/321 (3%)

Query: 228 FKDVRADLFTYNTLIALYCKKGMHY--EALAVQDRMEREG---ISPDIVTYNSLIHGFCR 282
             DVR D  +YNT++A  C++G  +  +A ++   M RE      P+ V+Y +++ G C 
Sbjct: 77  LPDVR-DAVSYNTVLAALCRRGGDHLRQARSLLVDMSREAHPAARPNAVSYTTVMRGLCA 135

Query: 283 EGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVT 340
             R  EA  L R ++  G   + VTY TLI G C A++L+ AL L + M   GV P VV 
Sbjct: 136 SRRTGEAVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVV 195

Query: 341 YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML 400
           Y+ +LR  C+ GR +D  ++  +M+ + I PD +    LI+  CK G T  A KVK+ M+
Sbjct: 196 YSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMV 255

Query: 401 EAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEE 460
           + GL  +  TY  LI+  CK   +  A  L   M D G +P   +Y+ L+ G       +
Sbjct: 256 QRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMD 315

Query: 461 ALLKLLDEFVSRGLCV--DVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTS 518
             +  L+E +     V  DV  + ++I   CK  ++  A ++  +M   G + + V Y  
Sbjct: 316 EAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNY 375

Query: 519 LAYAYWRAGEPKACSDILDDM 539
           L   + R  + K   +++D++
Sbjct: 376 LIGGFLRVHKVKMAMNLMDEL 396



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 53/227 (23%), Positives = 101/227 (44%), Gaps = 8/227 (3%)

Query: 343 SILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG-----DTASAMKVKN 397
           ++L +  +   + +A  LL+ + + +   D V+ NT++ A C+ G        S +   +
Sbjct: 56  ALLNRRLRGAPVTEACSLLSALPDVR---DAVSYNTVLAALCRRGGDHLRQARSLLVDMS 112

Query: 398 RMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKN 457
           R        +  +Y  ++ G C ++    A  LL  M  +G      +Y  L+ G C+ +
Sbjct: 113 REAHPAARPNAVSYTTVMRGLCASRRTGEAVALLRSMQASGVRADVVTYGTLIRGLCDAS 172

Query: 458 NEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYT 517
             +A L+LLDE    G+  +V VY  L+R +C+  +     ++F  M   GI  D +++T
Sbjct: 173 ELDAALELLDEMCGSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFT 232

Query: 518 SLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
            L     + G+    + + D M +R L   +  Y     S  K+  +
Sbjct: 233 GLIDDLCKEGKTGKAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSV 279



 Score = 40.4 bits (93), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 44/94 (46%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           Q+   M    L P     ++L+N  AK    +   +V K+M   G V ++ +++ LI   
Sbjct: 495 QLIQDMLDEGLAPDAVTYSMLINMYAKLGDLEEAERVLKQMTASGFVPDVAVFDSLIKGY 554

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIAL 244
                 DKV KL+ EM  K+V  D    +T+I L
Sbjct: 555 SAEGQTDKVLKLIHEMRAKNVAFDPKIISTIIRL 588


>gi|297844892|ref|XP_002890327.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297336169|gb|EFH66586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 903

 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 148/565 (26%), Positives = 277/565 (49%), Gaps = 19/565 (3%)

Query: 12  KFIKTISAIMLKGHWAKL--LNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAES 69
           + ++ +S +++ G +  L  L+ + +  L ++ + ++ LN   C  I +L+    K+   
Sbjct: 44  ELLERVSRLLVLGRYEALHDLSLDFSDELLNSILRRLRLNPEACVEIFNLASKQQKFR-- 101

Query: 70  AVPNYKHSLQSHWTMIHILTKNKHFKSAQNML-EKIALRDFLSTPSVLNALVKIHDDPDG 128
             P+YK    ++  M+HIL++ +++   ++ L E +AL    S   V   LV++  +   
Sbjct: 102 --PDYK----AYCKMVHILSRARNYGQTKSYLCELVALNH--SGFVVWGELVRVFKEFSF 153

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           +  V   ++  YA   M ++ L VFD M  +  +P L +C  LL++L K     +   VY
Sbjct: 154 SPTVFDMILKVYAEKGMVKNALHVFDNMGKYGRIPSLLSCNSLLSNLVKKGENFVALHVY 213

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFK-DVRADLFTYNTLIALYCK 247
            +M+   V  ++   +++++A C+   VDK      EM+    +  ++ T N+LI  Y  
Sbjct: 214 DQMISFEVSPDVFTCSIVVNAYCRCGKVDKAMAFAKEMDNSLGLELNVVTCNSLINGYAM 273

Query: 248 KGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVT 305
            G       V   M   G+S ++VT+ SLI  +C++G M EA ++F  +  K   P+   
Sbjct: 274 IGDVEGMTRVLRLMSERGVSRNVVTFTSLIKSYCKKGLMEEAEQVFELVTEKKLVPDQHM 333

Query: 306 YTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMN 365
           +  LIDGYCR   + +A+R+ + M   GV       NS++   CK G++ +A ++L  MN
Sbjct: 334 HGVLIDGYCRNGRICDAVRVHDYMIEMGVRTNTTICNSLINGYCKSGQLVEAEQILTRMN 393

Query: 366 EKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMD 425
           +  + PD+ T NTL++ YC+ G    A+K+  RM +  ++    TY  L+ G+ +     
Sbjct: 394 DWSLKPDHHTYNTLVDGYCRAGHVDEALKLCGRMCQKEVVPTVMTYNILLKGYSRIGAFH 453

Query: 426 IAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
               L   ML  G + +  S S L++      + +  +KL +  ++RGL  D      +I
Sbjct: 454 DVLSLWKMMLKRGVTANEISCSTLLEALFKLGDFDEAMKLWENVLARGLLTDTITLNVMI 513

Query: 486 RRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
              CK EKV+ A+ + + +       D   Y +L++ Y+  G  K    + D M ++ + 
Sbjct: 514 SGLCKMEKVNEAKEILDNVNIFRCKPDVQTYQALSHGYYNVGNLKEAFAVKDFMEKKGIF 573

Query: 546 ITLKIYRSFSAS---YAKDNEILDL 567
            T+++Y +  +    Y   N++ DL
Sbjct: 574 PTIEMYNTLISGAFKYKHLNKVADL 598



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 102/372 (27%), Positives = 192/372 (51%), Gaps = 4/372 (1%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKD-RLTDMVWKV 187
           N    + L+  Y    + ++  QVF+ +    L+P  H   VL++   ++ R+ D V +V
Sbjct: 295 NVVTFTSLIKSYCKKGLMEEAEQVFELVTEKKLVPDQHMHGVLIDGYCRNGRICDAV-RV 353

Query: 188 YKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCK 247
           +  M+++GV  N  + N LI+  CKS  + + E++L  M    ++ D  TYNTL+  YC+
Sbjct: 354 HDYMIEMGVRTNTTICNSLINGYCKSGQLVEAEQILTRMNDWSLKPDHHTYNTLVDGYCR 413

Query: 248 KGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVT 305
            G   EAL +  RM ++ + P ++TYN L+ G+ R G   +   L++ +  +G T N ++
Sbjct: 414 AGHVDEALKLCGRMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVTANEIS 473

Query: 306 YTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMN 365
            +TL++   +  D +EA++L E + A+G+    +T N ++  LCK  ++ +A  +L+ +N
Sbjct: 474 CSTLLEALFKLGDFDEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVN 533

Query: 366 EKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMD 425
             +  PD  T   L + Y  +G+   A  VK+ M + G+      Y  LI G  K K ++
Sbjct: 534 IFRCKPDVQTYQALSHGYYNVGNLKEAFAVKDFMEKKGIFPTIEMYNTLISGAFKYKHLN 593

Query: 426 IAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
              +L+  +   G +P+  +Y  L+ G+CN    +       E + +G+ ++V++   + 
Sbjct: 594 KVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIA 653

Query: 486 RRFCKKEKVDYA 497
               + +K D A
Sbjct: 654 NSLFRLDKFDEA 665



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 96/368 (26%), Positives = 173/368 (47%), Gaps = 43/368 (11%)

Query: 75  KHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLS 134
           K  +Q++  + H       + +  N+ E  A++DF+    +   +   +    G      
Sbjct: 538 KPDVQTYQALSH------GYYNVGNLKEAFAVKDFMEKKGIFPTIEMYNTLISG------ 585

Query: 135 WLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQL 194
                Y +L    D   +  ++R   L P +     L+       + D  +    +M++ 
Sbjct: 586 --AFKYKHLNKVAD---LVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEK 640

Query: 195 GVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLF--TYNTL------IALYC 246
           G+  N+++ + + ++  +    D+     C +  K V  DL    Y +L       A  C
Sbjct: 641 GITLNVNICSKIANSLFRLDKFDEA----CLLLQKIVDFDLLLPGYQSLKEFLEPSATTC 696

Query: 247 KKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGA---TPNH 303
            K     A +V++   ++ + P+ + YN  I G C+ G++ +A++LF D+  +    P+ 
Sbjct: 697 LKTQKI-AESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLTDAQKLFSDLLSSDRFIPDE 755

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
            TYT LI G     D+ +A  LR+ MA KG+ P +VTYN++++ LCK G +  A RLL +
Sbjct: 756 YTYTILIHGCAIDGDINKAFNLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLRK 815

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
           + +K   P+ +T NTLI+   K GD A AM++K +M+E G          L+ G  K  +
Sbjct: 816 LPQKGTTPNAITYNTLIDGLIKSGDVAEAMRLKEKMIEKG----------LVRGSYKQGD 865

Query: 424 MDIAKELL 431
           +D  KE+L
Sbjct: 866 VDKPKEVL 873



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 118/484 (24%), Positives = 198/484 (40%), Gaps = 51/484 (10%)

Query: 126 PDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVW 185
           PD   H  + LV  Y       + L++  +M    ++P +    +LL   ++      V 
Sbjct: 399 PD--HHTYNTLVDGYCRAGHVDEALKLCGRMCQKEVVPTVMTYNILLKGYSRIGAFHDVL 456

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
            ++K M++ GV AN    + L+ A  K  D D+  KL   +  + +  D  T N +I+  
Sbjct: 457 SLWKMMLKRGVTANEISCSTLLEALFKLGDFDEAMKLWENVLARGLLTDTITLNVMISGL 516

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRL--FRDIKGATPNH 303
           CK     EA  + D +      PD+ TY +L HG+   G ++EA  +  F + KG  P  
Sbjct: 517 CKMEKVNEAKEILDNVNIFRCKPDVQTYQALSHGYYNVGNLKEAFAVKDFMEKKGIFPTI 576

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
             Y TLI G  +   L +   L   + A+G+ P V TY +++   C  G I  A     E
Sbjct: 577 EMYNTLISGAFKYKHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFE 636

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLML----------------- 406
           M EK I  +   C+ + N+  ++     A  +  ++++  L+L                 
Sbjct: 637 MIEKGITLNVNICSKIANSLFRLDKFDEACLLLQKIVDFDLLLPGYQSLKEFLEPSATTC 696

Query: 407 ---------------------DQFTYKALIHGFCKAKEMDIAKELLFGMLDAG-FSPSYC 444
                                +   Y   I G CKA ++  A++L   +L +  F P   
Sbjct: 697 LKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLTDAQKLFSDLLSSDRFIPDEY 756

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
           +Y+ L+ G     +      L DE   +G+  ++  Y ALI+  CK   VD AQRL   +
Sbjct: 757 TYTILIHGCAIDGDINKAFNLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLRKL 816

Query: 505 QGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSF--SASYAKDN 562
              G   +++ Y +L     ++G      D+ + M  +  MI   + R         K  
Sbjct: 817 PQKGTTPNAITYNTLIDGLIKSG------DVAEAMRLKEKMIEKGLVRGSYKQGDVDKPK 870

Query: 563 EILD 566
           E+LD
Sbjct: 871 EVLD 874


>gi|32489924|emb|CAE05516.1| OSJNBa0038P21.9 [Oryza sativa Japonica Group]
          Length = 825

 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 120/452 (26%), Positives = 213/452 (47%), Gaps = 38/452 (8%)

Query: 149 GLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIH 208
           GL VF ++    L P + +   L++  +K+   D    ++ KM + G++ N+  Y+ LI+
Sbjct: 208 GLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLIN 267

Query: 209 ACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISP 268
             CK+ ++DK E++L +M    VR +  TYN LI  Y   GM  E++ V   M    + P
Sbjct: 268 GLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVP 327

Query: 269 DIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEALRLR 326
           D+   NS +   C+ GR++EAR +F    +KG  P+ ++Y  L+ GY  A  +     L 
Sbjct: 328 DVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLF 387

Query: 327 EVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKI 386
            VM  +GV P    +N+++    + G +  +  +  +M ++ + PD +T +T+I+A+C++
Sbjct: 388 NVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRL 447

Query: 387 GDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFS------ 440
           G    AM+  N M++ G+  D   Y  LI G C  +++  AKEL+  ML  G        
Sbjct: 448 GRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKF 507

Query: 441 ------------------------------PSYCSYSWLVDGYCNKNNEEALLKLLDEFV 470
                                         P+  +++ LVDGYC   N +  + LLD   
Sbjct: 508 FTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSME 567

Query: 471 SRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPK 530
           S G+  D+  Y  L+  +CK  ++D A  LF  M    +   SV Y  + +  ++A    
Sbjct: 568 SVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTI 627

Query: 531 ACSDILDDMYRRRLMITLKIYRSFSASYAKDN 562
              ++  +M    + +++  Y +      ++N
Sbjct: 628 VAKEMFHEMIESGMAVSIHTYATVLGGLCRNN 659



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 122/508 (24%), Positives = 234/508 (46%), Gaps = 25/508 (4%)

Query: 63  FFKWAESAV-PNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVK 121
           F+K  E  + PN    + ++ ++I+ L K K    A+ +L ++           + A V+
Sbjct: 247 FYKMEEQGIMPN----VVTYSSLINGLCKTKEMDKAERVLRQM-----------VGAGVR 291

Query: 122 IHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLT 181
                  N+   + L+  Y+   M ++ ++VF +M    L+P +  C   + +L K    
Sbjct: 292 ------PNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRI 345

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
                ++  MV  G   ++  Y  L+H    +  +  ++ L   M  + V  D   +NTL
Sbjct: 346 KEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTL 405

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGA 299
           I  Y + GM  ++L + + M ++G++PDI+T++++I  FCR GR+ +A   F  +   G 
Sbjct: 406 INAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGV 465

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTY-NSILRKLCKEGRIRDAN 358
            P+   Y+ LI G C   DL +A  L   M +KG+ P  + +  SI+  LCKEGR+ +  
Sbjct: 466 PPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGK 525

Query: 359 RLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGF 418
            +++ +      P+ +T N+L++ YC +G+   A+ + + M   G+  D +TY  L+ G+
Sbjct: 526 DVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGY 585

Query: 419 CKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDV 478
           CK   +D A  L   ML    + +  SY+ ++ G           ++  E +  G+ V +
Sbjct: 586 CKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSI 645

Query: 479 SVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDD 538
             Y  ++   C+    D A  L   +    +  D + +  +  A ++ G  +   ++   
Sbjct: 646 HTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAA 705

Query: 539 MYRRRLMITLKIYRSFSASYAKDNEILD 566
           +    L+ T+  YR    +  K+    D
Sbjct: 706 ISTYGLVPTILTYRVMITNLIKEESFED 733



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 108/407 (26%), Positives = 196/407 (48%), Gaps = 3/407 (0%)

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
           P ++   +L+N   + R  D+   V+ ++++ G+  ++  YN LI    K  +VDK   L
Sbjct: 187 PTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDL 246

Query: 223 LCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR 282
             +ME + +  ++ TY++LI   CK     +A  V  +M   G+ P+ +TYN LIHG+  
Sbjct: 247 FYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYST 306

Query: 283 EGRMREARRLFRDIKGA--TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVT 340
            G  +E+ R+F+++  +   P+     + +   C+   ++EA  + + M  KG  P V++
Sbjct: 307 SGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVIS 366

Query: 341 YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML 400
           Y ++L      G I   + L N M  + + PD    NTLINAY ++G    ++ +   M 
Sbjct: 367 YGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMT 426

Query: 401 EAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEE 460
           + G+  D  T+  +I  FC+   +D A E    M+D G  P    YS L+ G CN+ +  
Sbjct: 427 KQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLV 486

Query: 461 ALLKLLDEFVSRGLCVD-VSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
              +L+ + +S+G+    +  + ++I   CK+ +V   + + +L+   G   + + + SL
Sbjct: 487 KAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSL 546

Query: 520 AYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
              Y   G  K    +LD M    +   +  Y +    Y K   I D
Sbjct: 547 VDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDD 593



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 109/417 (26%), Positives = 187/417 (44%), Gaps = 5/417 (1%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAK-DRLTDMVWKV 187
           + HV + L+  YA L M    L +F+ M    + P +   + ++++  +  RL D + K 
Sbjct: 398 DRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEK- 456

Query: 188 YKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNT-LIALYC 246
           +  M+  GV  +  +Y+ LI   C   D+ K ++L+ +M  K +      + T +I   C
Sbjct: 457 FNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLC 516

Query: 247 KKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHV 304
           K+G   E   V D +   G  P+++T+NSL+ G+C  G M+EA  L   ++  G  P+  
Sbjct: 517 KEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIY 576

Query: 305 TYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM 364
           TY TL+DGYC+   +++AL L   M  K V    V+YN IL  L +  R   A  + +EM
Sbjct: 577 TYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEM 636

Query: 365 NEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEM 424
            E  +A    T  T++   C+   T  A  +  ++    +  D  T+  +I    K    
Sbjct: 637 IESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRR 696

Query: 425 DIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRAL 484
             AKEL   +   G  P+  +Y  ++     + + E    L           D  +   +
Sbjct: 697 QEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEI 756

Query: 485 IRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
           IR    K +V  A    + +   GIL ++   + L Y +   G+ +    +L + YR
Sbjct: 757 IRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYREYIKLLPEKYR 813



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 135/281 (48%), Gaps = 7/281 (2%)

Query: 254 ALAVQ--DRMER---EGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTY 306
           ALAV+   RM+R      +P I TYN LI+ + R  R      +F  +   G  P+  +Y
Sbjct: 168 ALAVELFKRMDRCACPEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSY 227

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
             LIDG+ +  ++++A  L   M  +G+ P VVTY+S++  LCK   +  A R+L +M  
Sbjct: 228 NALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVG 287

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
             + P+N+T N LI+ Y   G    +++V   M  + L+ D     + +   CK   +  
Sbjct: 288 AGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKE 347

Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
           A+++   M+  G  P   SY  L+ GY        +  L +  V  G+  D  V+  LI 
Sbjct: 348 ARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLIN 407

Query: 487 RFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
            + +   +D +  +F  M   G+  D + ++++  A+ R G
Sbjct: 408 AYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLG 448



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/220 (27%), Positives = 95/220 (43%), Gaps = 3/220 (1%)

Query: 370 APDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKE 429
           AP   T N LIN Y +       + V  R+L  GL  D F+Y ALI GF K  E+D A +
Sbjct: 186 APTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHD 245

Query: 430 LLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFC 489
           L + M + G  P+  +YS L++G C     +   ++L + V  G+  +   Y  LI  + 
Sbjct: 246 LFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYS 305

Query: 490 KKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLK 549
                  + R+F  M  + ++ D     S   A  + G  K   DI D M  +     + 
Sbjct: 306 TSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVI 365

Query: 550 IYRSFSASYAKDNEIL---DLFWSHVVDRGLMSKHIFKEM 586
            Y +    YA    I    +LF   V +  +  +H+F  +
Sbjct: 366 SYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTL 405


>gi|222637660|gb|EEE67792.1| hypothetical protein OsJ_25528 [Oryza sativa Japonica Group]
          Length = 475

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 113/371 (30%), Positives = 193/371 (52%), Gaps = 2/371 (0%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           Q+ D+M  H +  +      LL++  +++  D V ++ K M   G+   +  Y +L+   
Sbjct: 88  QLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVDGL 147

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
             + D+ KVE +  EM+ K++  D++ Y+++I  YC+ G    A  V D     GI P+ 
Sbjct: 148 SAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNE 207

Query: 271 VTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
            TY +LI+GFC+ G+M  A  L  D  ++G   N + + T+IDGYCR N +++AL ++ +
Sbjct: 208 HTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMI 267

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M   G+   V TYN++   L +  R+ +A  LL  M EK + P++V+  TLI+ +C  GD
Sbjct: 268 MEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGD 327

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
              A ++   M   G      TY  ++ G+ K   +  A+     M   G  P   SY+ 
Sbjct: 328 MVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAA 387

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG 508
           LV G+C     +  L+L +E   RG   ++  Y ALI    K+ + + A +L++ M G+G
Sbjct: 388 LVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDG 447

Query: 509 ILGDSVIYTSL 519
           +  D  +Y++L
Sbjct: 448 LTPDDALYSAL 458



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 95/368 (25%), Positives = 176/368 (47%), Gaps = 2/368 (0%)

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER 263
           +V++   CKS  V    +LL EM    V+ +   YN+L+  Y ++        +   ME 
Sbjct: 71  SVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMEN 130

Query: 264 EGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGA--TPNHVTYTTLIDGYCRANDLEE 321
           EGI P + TY  L+ G      + +   +F ++K    + +   Y+++I+ YCRA ++  
Sbjct: 131 EGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRR 190

Query: 322 ALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
           A  + +     G+ P   TY +++   CK G++  A  L+ +M  + +  + +  NT+I+
Sbjct: 191 ASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMID 250

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
            YC+      A+++K  M + G+ LD +TY  L  G  +A  MD AK LL  M++ G  P
Sbjct: 251 GYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRP 310

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
           ++ SY+ L+  +CN+ +     +L  E    G    +  Y  ++  + KK  +  A+R  
Sbjct: 311 NHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFK 370

Query: 502 NLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKD 561
           N M+  G++ D   Y +L + +   G+      + ++M +R     L  Y +  +  AK+
Sbjct: 371 NEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKE 430

Query: 562 NEILDLFW 569
               + F 
Sbjct: 431 GRSEEAFQ 438



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 90/312 (28%), Positives = 149/312 (47%), Gaps = 37/312 (11%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           VF++M+  NL   ++  + ++N+  +        +V+ + V  G+  N H Y  LI+  C
Sbjct: 159 VFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFC 218

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           K   ++  E L+ +M+ + V  +   +NT+I  YC+K M  +AL ++  ME+ GI  D+ 
Sbjct: 219 KIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVY 278

Query: 272 TYNSLIHGF-----------------------------------CREGRMREARRLFRDI 296
           TYN+L  G                                    C EG M EARRLFR++
Sbjct: 279 TYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREM 338

Query: 297 --KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRI 354
              GA P+ VTY  ++DGY +   + EA R +  M  KG+ P + +Y +++   C  G++
Sbjct: 339 AGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKV 398

Query: 355 RDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKAL 414
             A RL  EM ++   P+ V    LI+   K G +  A ++ + ML  GL  D   Y AL
Sbjct: 399 DVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSAL 458

Query: 415 IHGFCKAKEMDI 426
           +      K+ ++
Sbjct: 459 VGSLHTDKKQNV 470



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 66/222 (29%), Positives = 105/222 (47%), Gaps = 2/222 (0%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N  V + ++  Y    M    L++   M    +   ++    L   L +    D    + 
Sbjct: 241 NQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLL 300

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
           + M++ GV  N   Y  LI   C   D+ +  +L  EM        L TYN ++  Y KK
Sbjct: 301 RIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKK 360

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTY 306
           G   EA   ++ ME++G+ PDI +Y +L+HG C  G++  A RLF ++K  G+ PN V Y
Sbjct: 361 GSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAY 420

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
           T LI G  +    EEA +L + M   G+ P    Y++++  L
Sbjct: 421 TALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALVGSL 462



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 107/221 (48%), Gaps = 12/221 (5%)

Query: 371 PDNVT---CNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIA 427
           PD+VT    + +++ YCK G  A A ++ + M   G+ ++   Y +L+  + + K+ D  
Sbjct: 62  PDSVTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRV 121

Query: 428 KELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRR 487
            E+L  M + G  P+  +Y+ LVDG     +   +  + +E  S+ L  DV  Y ++I  
Sbjct: 122 AEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINA 181

Query: 488 FCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMIT 547
           +C+   V  A  +F+   GNGI  +   Y +L   + + G+ +A   ++ DM  R + I 
Sbjct: 182 YCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGIN 241

Query: 548 LKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKEMQL 588
             ++ +    Y + N         +VD+ L  K I ++M +
Sbjct: 242 QIVFNTMIDGYCRKN---------MVDKALEIKMIMEKMGI 273


>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
          Length = 457

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 112/401 (27%), Positives = 200/401 (49%), Gaps = 8/401 (1%)

Query: 191 MVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGM 250
           + ++ V  + + YN LI   C          +L EM  +    D+ TY  L+   CK+  
Sbjct: 23  VAEMPVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSG 82

Query: 251 HYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTT 308
           + +A+ + D M  +G +PDIVTYN +++G C+EGR+ +A    +++   G  PN V+Y  
Sbjct: 83  YKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNI 142

Query: 309 LIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKK 368
           ++ G C A   E+A  L   M  KG  P VVT+N ++  LC++G +  A  +L ++ +  
Sbjct: 143 VLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYG 202

Query: 369 IAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAK 428
             P++++ N L++A+CK      AM   + M+  G   D  +Y  L+   C++ E+D+A 
Sbjct: 203 CTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAV 262

Query: 429 ELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRF 488
           ELL  + D G +P   SY+ ++DG       +  L+LL+E VS+GL  D+  Y  +    
Sbjct: 263 ELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGL 322

Query: 489 CKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITL 548
           C++++++ A R F  +Q  GI  ++V+Y ++     +  E  +  D+   M     M   
Sbjct: 323 CREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNE 382

Query: 549 KIYR------SFSASYAKDNEILDLFWSHVVDRGLMSKHIF 583
             Y       ++     +  ++LD   S   +  L+  H+ 
Sbjct: 383 STYTILIEGLAYEGLIKEARDLLDELCSRAGEEILLDVHLI 423



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 100/364 (27%), Positives = 193/364 (53%), Gaps = 10/364 (2%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMT--QDGLQVFDQMRVHNLMPHLHACTVL 171
           +VL+ +++    PD    V+++ ++  A  K +  +  +++ D+MR     P +    V+
Sbjct: 53  AVLDEMLRRRCVPD----VVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVV 108

Query: 172 LNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDV 231
           +N + ++   D   +  K +   G   N   YN+++   C +   +  E+L+ EM  K  
Sbjct: 109 VNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGC 168

Query: 232 RADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARR 291
             ++ T+N LI+  C+KG+   AL V +++ + G +P+ ++YN L+H FC++ +M +A  
Sbjct: 169 PPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMA 228

Query: 292 LFRDI---KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
            F D+   +G  P+ V+Y TL+   CR+ +++ A+ L   +  KG  P +++YN+++  L
Sbjct: 229 -FLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGL 287

Query: 349 CKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ 408
            K G+ ++A  LLNEM  K + PD +T +T+    C+      A++   ++ + G+  + 
Sbjct: 288 TKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNT 347

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
             Y A+I G CK +E   A +L   M+  G  P+  +Y+ L++G   +   +    LLDE
Sbjct: 348 VLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDE 407

Query: 469 FVSR 472
             SR
Sbjct: 408 LCSR 411



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 110/382 (28%), Positives = 180/382 (47%), Gaps = 2/382 (0%)

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
           P  +    L+  L     T     V  +M++   V ++  Y +L+ A CK S   +  KL
Sbjct: 30  PDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKL 89

Query: 223 LCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR 282
           L EM  K    D+ TYN ++   C++G   +A+     +   G  P+ V+YN ++ G C 
Sbjct: 90  LDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCT 149

Query: 283 EGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVT 340
             R  +A  L  ++  KG  PN VT+  LI   CR   +E AL + E +   G  P  ++
Sbjct: 150 AERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLS 209

Query: 341 YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML 400
           YN +L   CK+ ++  A   L+ M  +   PD V+ NTL+ A C+ G+   A+++ +++ 
Sbjct: 210 YNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLK 269

Query: 401 EAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEE 460
           + G      +Y  +I G  KA +   A ELL  M+  G  P   +YS +  G C ++  E
Sbjct: 270 DKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIE 329

Query: 461 ALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLA 520
             ++   +    G+  +  +Y A+I   CK+ +   A  LF  M GNG + +   YT L 
Sbjct: 330 DAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILI 389

Query: 521 YAYWRAGEPKACSDILDDMYRR 542
                 G  K   D+LD++  R
Sbjct: 390 EGLAYEGLIKEARDLLDELCSR 411



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 94/359 (26%), Positives = 172/359 (47%), Gaps = 2/359 (0%)

Query: 146 TQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNV 205
           T + L V D+M     +P +   T+LL +  K        K+  +M   G   +I  YNV
Sbjct: 48  TANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNV 107

Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
           +++  C+   VD   + L  +       +  +YN ++   C      +A  +   M ++G
Sbjct: 108 VVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKG 167

Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEAL 323
             P++VT+N LI   CR+G +  A  +   I   G TPN ++Y  L+  +C+   +++A+
Sbjct: 168 CPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAM 227

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
              ++M ++G YP +V+YN++L  LC+ G +  A  LL+++ +K  AP  ++ NT+I+  
Sbjct: 228 AFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGL 287

Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY 443
            K G T  A+++ N M+  GL  D  TY  +  G C+   ++ A      + D G  P+ 
Sbjct: 288 TKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNT 347

Query: 444 CSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             Y+ ++ G C +    + + L    +  G   + S Y  LI     +  +  A+ L +
Sbjct: 348 VLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLD 406



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 149/315 (47%), Gaps = 5/315 (1%)

Query: 271 VTYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMA 330
           + YN+++ G+C  G++  ARRL  ++    P+  TY TLI G C       AL + + M 
Sbjct: 1   MAYNAMVAGYCGAGQLDAARRLVAEMP-VEPDAYTYNTLIRGLCGRGRTANALAVLDEML 59

Query: 331 AKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTA 390
            +   P VVTY  +L   CK    + A +LL+EM +K   PD VT N ++N  C+ G   
Sbjct: 60  RRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVD 119

Query: 391 SAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLV 450
            A++    +   G   +  +Y  ++ G C A+  + A+EL+  M   G  P+  +++ L+
Sbjct: 120 DAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLI 179

Query: 451 DGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGIL 510
              C K   E  L++L++    G   +   Y  L+  FCK++K+D A    +LM   G  
Sbjct: 180 SFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCY 239

Query: 511 GDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFS---ASYAKDNEILDL 567
            D V Y +L  A  R+GE     ++L  +  +     L  Y +         K  E L+L
Sbjct: 240 PDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALEL 299

Query: 568 FWSHVVDRGLMSKHI 582
             + +V +GL    I
Sbjct: 300 L-NEMVSKGLQPDII 313


>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
          Length = 1001

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 115/399 (28%), Positives = 204/399 (51%), Gaps = 2/399 (0%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           + L  F++M      P       LL S+AK +    +  + ++M   G+  +++   ++I
Sbjct: 28  EALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVI 87

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           ++ C  + VD     L ++     + D  T+ TLI   C +G   EAL + D+M  EG  
Sbjct: 88  NSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQ 147

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
           P++VTY +LI+G C++ ++ EA  +F ++  KG +PN VTY +LI G C+  + +    L
Sbjct: 148 PNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTL 207

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
              M    + P V T N+++  LCKEG + +A+ +++ M  + + P+ VT N L++ +C 
Sbjct: 208 MNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCL 267

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
             +   A+KV + M+    + +  +Y  LI+G+CK + +D A  L   M     +P+  +
Sbjct: 268 RNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVT 327

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+ L+ G C+    +  + L  E V+RG   D+  YR L    CK   +D A  L   ++
Sbjct: 328 YNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIE 387

Query: 506 GNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL 544
           G+    D  IYT++     RAGE +   D+  ++  + L
Sbjct: 388 GSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGL 426



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 121/409 (29%), Positives = 191/409 (46%), Gaps = 39/409 (9%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           S L  ++K+   PD  +   + L+          + L +FD+M      P++     L+N
Sbjct: 101 SALAKILKLGHQPDATT--FTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLIN 158

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
            L KDR     + ++ +M+  G+  NI  YN LIH  CK  +   V  L+ EM    +  
Sbjct: 159 GLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMP 218

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYN------------------- 274
           D+FT NT++   CK+GM  EA  V D M   G+ P++VTYN                   
Sbjct: 219 DVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVF 278

Query: 275 ----------------SLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRA 316
                           +LI+G+C+   + +A  LF ++  +  TPN VTY TLI G C  
Sbjct: 279 DTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHV 338

Query: 317 NDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTC 376
             L++A+ L   M A+G  P +VTY ++   LCK   +  A  LL  +      PD    
Sbjct: 339 GRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIY 398

Query: 377 NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD 436
            T+++  C+ G+   A  + + +   GL  + +TY  +IHG CK   +  A +L   M  
Sbjct: 399 TTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNK 458

Query: 437 AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
            G SP+ C+Y+ +  G+   N     ++LL+E ++RG  VDVS    L+
Sbjct: 459 NGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLV 507



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 122/458 (26%), Positives = 205/458 (44%), Gaps = 37/458 (8%)

Query: 122 IHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLT 181
           +H  P  ++   + L+   A  K     L +  QM    + P ++   +++NSL      
Sbjct: 37  LHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRV 96

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
           D  +    K+++LG   +   +  LI   C    + +   L  +M  +  + ++ TY TL
Sbjct: 97  DFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTL 156

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR------------------- 282
           I   CK     EA  +   M  +GISP+IVTYNSLIHG C+                   
Sbjct: 157 INGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKI 216

Query: 283 ----------------EGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
                           EG + EA  +   +  +G  PN VTY  L+DG+C  N+++ A++
Sbjct: 217 MPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVK 276

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           + + M  K     V++YN+++   CK   +  A  L  EM+ +++ P+ VT NTLI+  C
Sbjct: 277 VFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLC 336

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
            +G    A+ + + M+  G + D  TY+ L    CK + +D A  LL  +  + + P   
Sbjct: 337 HVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQ 396

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
            Y+ ++DG C     E    L     S+GL  +V  Y  +I   CK+  +  A +LF+ M
Sbjct: 397 IYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEM 456

Query: 505 QGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRR 542
             NG   +   Y  +   + R  E     ++L++M  R
Sbjct: 457 NKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLAR 494



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 111/402 (27%), Positives = 192/402 (47%), Gaps = 17/402 (4%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           S  N ++ +H  P  ++   + L+   A +K     L +  QM    + P ++   +L+N
Sbjct: 567 SSFNRMLHMHPPP--STVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILIN 624

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
           S    R     + V  K+++LG   ++  Y  L++              LC+M  K +  
Sbjct: 625 SFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNG-------------LCKMITKGISP 671

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           D+FTYN+LI   C          + + M    I P++V +++++   C+EG +  A  + 
Sbjct: 672 DIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVV 731

Query: 294 RDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
             +  +G  P+ VTYT L+DG+C  ++++EA+++ + M  KG  P V +YN ++   C+ 
Sbjct: 732 DMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQI 791

Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
            R+  A  LL +M+ + +  D VT NTLI+  C +G    A+ + + M+ +G + D  TY
Sbjct: 792 QRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTY 851

Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
           + L+   CK   +  A  LL  +  +        Y+  +DG C     EA   L     S
Sbjct: 852 RILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSS 911

Query: 472 RGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDS 513
           +GL  DV  Y  +I   CK+  +D A +LF  M  N I  +S
Sbjct: 912 KGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENDIWSNS 953



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 96/329 (29%), Positives = 163/329 (49%), Gaps = 2/329 (0%)

Query: 238 YNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK 297
           +N L+    K   H   L++  +M+  GI PD+ T   +I+  C   R+  A      I 
Sbjct: 48  FNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKIL 107

Query: 298 --GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIR 355
             G  P+  T+TTLI G C    + EAL L + M  +G  P VVTY +++  LCK+ ++ 
Sbjct: 108 KLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVT 167

Query: 356 DANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALI 415
           +A  + +EM  K I+P+ VT N+LI+  CK+ +      + N M+++ +M D FT   ++
Sbjct: 168 EAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVV 227

Query: 416 HGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLC 475
              CK   +  A +++  M+  G  P+  +Y+ L+DG+C +N  +  +K+ D  V +   
Sbjct: 228 DALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCV 287

Query: 476 VDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDI 535
            +V  Y  LI  +CK + VD A  LF  M    +  ++V Y +L +     G  +    +
Sbjct: 288 ANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISL 347

Query: 536 LDDMYRRRLMITLKIYRSFSASYAKDNEI 564
             +M  R  +  L  YR+ S    K+  +
Sbjct: 348 FHEMVARGQIPDLVTYRTLSDYLCKNRHL 376



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 114/412 (27%), Positives = 199/412 (48%), Gaps = 27/412 (6%)

Query: 74  YKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVL 133
           ++ ++ ++ T+I+ L K++    A N+  ++  +    +P+++     IH    G   + 
Sbjct: 146 FQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGI--SPNIVTYNSLIH----GLCKLC 199

Query: 134 SWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQ 193
            W           +    + ++M    +MP +     ++++L K+ +      V   M+ 
Sbjct: 200 EW-----------KHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIH 248

Query: 194 LGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYE 253
            GV  N+  YN L+   C  ++VD   K+   M  KD  A++ +YNTLI  YCK     +
Sbjct: 249 RGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDK 308

Query: 254 ALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLID 311
           A+ + + M R+ ++P+ VTYN+LIHG C  GR+++A  LF ++  +G  P+ VTY TL D
Sbjct: 309 AMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSD 368

Query: 312 GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAP 371
             C+   L++A+ L + +      P +  Y +IL  +C+ G + DA  L + ++ K + P
Sbjct: 369 YLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQP 428

Query: 372 DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
           +  T N +I+  CK G  A A K+ + M + G   +  TY  +  GF +  E     ELL
Sbjct: 429 NVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELL 488

Query: 432 FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRA 483
             ML  GFS    + + LV    +          LD+ V + LC   S  R 
Sbjct: 489 EEMLARGFSVDVSTTTLLVGMLSDDG--------LDQSVKQILCKPSSSSRP 532



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 106/382 (27%), Positives = 176/382 (46%), Gaps = 15/382 (3%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D L  F++M   +  P     T LL S+AK +    V  +  +M   G+  +++  N+LI
Sbjct: 564 DALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILI 623

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           ++ C    +     +L ++     + D+ TY TL+   CK             M  +GIS
Sbjct: 624 NSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLCK-------------MITKGIS 670

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDIKGA--TPNHVTYTTLIDGYCRANDLEEALRL 325
           PDI TYNSLIH  C     +    L  ++  +   PN V ++T++D  C+   +  A  +
Sbjct: 671 PDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDV 730

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
            ++M  +GV P VVTY +++   C    + +A ++ + M  K   P+  + N LIN YC+
Sbjct: 731 VDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQ 790

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
           I     AM +  +M   GL+ D  TY  LIHG C    +  A  L   M+ +G  P   +
Sbjct: 791 IQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVT 850

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y  L+D  C  ++    + LL       L  D+ VY   I   C+  +++ A+ LF+ + 
Sbjct: 851 YRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLS 910

Query: 506 GNGILGDSVIYTSLAYAYWRAG 527
             G+  D   Y  + +   + G
Sbjct: 911 SKGLQPDVRTYNIMIHGLCKRG 932



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 94/364 (25%), Positives = 172/364 (47%), Gaps = 11/364 (3%)

Query: 188 YKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCK 247
           + +M+ +    +   +  L+ +  K      V  L  +M+   +  D++T N LI  +C 
Sbjct: 569 FNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCH 628

Query: 248 KGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYT 307
                 A +V  ++ + G  PD+VTY +L++G C+              KG +P+  TY 
Sbjct: 629 LRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLCK-----------MITKGISPDIFTYN 677

Query: 308 TLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEK 367
           +LI   C   + +    L   M    + P VV +++++  LCKEG I  A+ +++ M ++
Sbjct: 678 SLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKR 737

Query: 368 KIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIA 427
            + PD VT   L++ +C   +   A+KV + M+  G + +  +Y  LI+G+C+ + MD A
Sbjct: 738 GVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKA 797

Query: 428 KELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRR 487
             LL  M   G      +Y+ L+ G C+    +  + L  E V+ G   D+  YR L+  
Sbjct: 798 MGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDY 857

Query: 488 FCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMIT 547
            CK   +  A  L   ++G+ +  D ++Y        RAGE +A  D+  ++  + L   
Sbjct: 858 LCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPD 917

Query: 548 LKIY 551
           ++ Y
Sbjct: 918 VRTY 921



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 108/470 (22%), Positives = 197/470 (41%), Gaps = 63/470 (13%)

Query: 122 IHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAK-DRL 180
           +H D   N    + L+  Y  ++     + +F++M    L P+      L++ L    RL
Sbjct: 282 VHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRL 341

Query: 181 TDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNT 240
            D +  ++ +MV  G + ++  Y  L    CK+  +DK   LL  +E  +   D+  Y T
Sbjct: 342 QDAI-SLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTT 400

Query: 241 LIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--G 298
           ++   C+ G   +A  +   +  +G+ P++ TYN +IHG C++G + EA +LF ++   G
Sbjct: 401 ILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNG 460

Query: 299 ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTY-------------NSIL 345
            +PN  TY  +  G+ R N+    + L E M A+G    V T               S+ 
Sbjct: 461 CSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVK 520

Query: 346 RKLCKEGR---------------------------------IRDANRLLNEMNEKKIAPD 372
           + LCK                                    + DA    N M      P 
Sbjct: 521 QILCKPSSSSRPSGTQMRSLPPLFLSSSHNSLHSRSPHFNTLDDALSSFNRMLHMHPPPS 580

Query: 373 NVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLF 432
            V    L+ +  K+   ++ + +  +M   G+  D +T   LI+ FC  + +  A  +L 
Sbjct: 581 TVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLA 640

Query: 433 GMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKE 492
            +L  GF P   +Y  L++G C             + +++G+  D+  Y +LI   C   
Sbjct: 641 KLLKLGFQPDVVTYGTLMNGLC-------------KMITKGISPDIFTYNSLIHALCNLC 687

Query: 493 KVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRR 542
           +  +   L N M  + I+ + V+++++  A  + G      D++D M +R
Sbjct: 688 EWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKR 737



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 114/551 (20%), Positives = 214/551 (38%), Gaps = 78/551 (14%)

Query: 50  LYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDF 109
           ++  CH+  L  A   + E         L ++ T+   L KN+H   A  +L+ I   ++
Sbjct: 332 IHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNW 391

Query: 110 LSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACT 169
                          DPD    + + ++         +D   +F  +    L P++    
Sbjct: 392 ---------------DPD--IQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYN 434

Query: 170 VLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFK 229
           ++++ L K  L     K++ +M + G   N   YN++     ++++  +  +LL EM  +
Sbjct: 435 IMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLAR 494

Query: 230 DVRADLFTYNTLIALYCKKGM--------------------------------------- 250
               D+ T   L+ +    G+                                       
Sbjct: 495 GFSVDVSTTTLLVGMLSDDGLDQSVKQILCKPSSSSRPSGTQMRSLPPLFLSSSHNSLHS 554

Query: 251 ---HY----EALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR--DIKGATP 301
              H+    +AL+  +RM      P  V +  L+    +         L    D  G  P
Sbjct: 555 RSPHFNTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPP 614

Query: 302 NHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLL 361
           +  T   LI+ +C    L  A  +   +   G  P VVTY +++  LCK           
Sbjct: 615 DVYTLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLCK----------- 663

Query: 362 NEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKA 421
             M  K I+PD  T N+LI+A C + +      + N M+ + +M +   +  ++   CK 
Sbjct: 664 --MITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKE 721

Query: 422 KEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVY 481
             + IA +++  M+  G  P   +Y+ L+DG+C ++  +  +K+ D  V +G   +V  Y
Sbjct: 722 GMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSY 781

Query: 482 RALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
             LI  +C+ +++D A  L   M   G++ D+V Y +L +     G  +    +  +M  
Sbjct: 782 NILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVA 841

Query: 542 RRLMITLKIYR 552
              +  L  YR
Sbjct: 842 SGQIPDLVTYR 852



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 63/264 (23%), Positives = 111/264 (42%)

Query: 297 KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRD 356
           K   P+ V +  L+    +       L L   M + G+ P V T   ++  LC   R+  
Sbjct: 39  KQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDF 98

Query: 357 ANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIH 416
           A   L ++ +    PD  T  TLI   C  G    A+ + ++M+  G   +  TY  LI+
Sbjct: 99  AFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLIN 158

Query: 417 GFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCV 476
           G CK +++  A  +   M+  G SP+  +Y+ L+ G C     + +  L++E V   +  
Sbjct: 159 GLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMP 218

Query: 477 DVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDIL 536
           DV     ++   CK+  V  A  + ++M   G+  + V Y +L   +    E      + 
Sbjct: 219 DVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVF 278

Query: 537 DDMYRRRLMITLKIYRSFSASYAK 560
           D M  +  +  +  Y +    Y K
Sbjct: 279 DTMVHKDCVANVISYNTLINGYCK 302



 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 61/248 (24%), Positives = 103/248 (41%)

Query: 317 NDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTC 376
           N L+EAL     M  K   P  V +N +L  + K         L  +M+   I PD  T 
Sbjct: 24  NTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTL 83

Query: 377 NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD 436
             +IN+ C +     A     ++L+ G   D  T+  LI G C   ++  A  L   M+ 
Sbjct: 84  AIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIG 143

Query: 437 AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDY 496
            GF P+  +Y  L++G C          +  E +++G+  ++  Y +LI   CK  +  +
Sbjct: 144 EGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKH 203

Query: 497 AQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSA 556
              L N M  + I+ D     ++  A  + G      D++D M  R +   +  Y +   
Sbjct: 204 VTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMD 263

Query: 557 SYAKDNEI 564
            +   NE+
Sbjct: 264 GHCLRNEV 271



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/206 (24%), Positives = 90/206 (43%)

Query: 340 TYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRM 399
           ++N+   K      + +A    N M  K+  P  V  N L+ +  K    ++ + +  +M
Sbjct: 12  SHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQM 71

Query: 400 LEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNE 459
              G+  D +T   +I+  C    +D A   L  +L  G  P   +++ L+ G C +   
Sbjct: 72  DSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKI 131

Query: 460 EALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
              L L D+ +  G   +V  Y  LI   CK  +V  A  +F+ M   GI  + V Y SL
Sbjct: 132 GEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSL 191

Query: 520 AYAYWRAGEPKACSDILDDMYRRRLM 545
            +   +  E K  + ++++M   ++M
Sbjct: 192 IHGLCKLCEWKHVTTLMNEMVDSKIM 217


>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 554

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 115/404 (28%), Positives = 202/404 (50%), Gaps = 6/404 (1%)

Query: 191 MVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGM 250
           + ++ V  + + YN LI   C          +L EM  +    D+ TY  L+   CK+  
Sbjct: 149 VAEMPVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSG 208

Query: 251 HYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTT 308
           + +A+ + D M  +G +PDIVTYN +++G C+EGR+ +A    +++   G  PN V+Y  
Sbjct: 209 YKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNI 268

Query: 309 LIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKK 368
           ++ G C A   E+A  L   M  KG  P VVT+N ++  LC++G +  A  +L ++ +  
Sbjct: 269 VLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYG 328

Query: 369 IAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAK 428
             P++++ N L++A+CK      AM   + M+  G   D  +Y  L+   C++ E+D+A 
Sbjct: 329 CTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAV 388

Query: 429 ELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRF 488
           ELL  + D G +P   SY+ ++DG       +  L+LL+E VS+GL  D+  Y  +    
Sbjct: 389 ELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGL 448

Query: 489 CKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITL 548
           C++++++ A R F  +Q  GI  ++V+Y ++     +  E  +  D+   M     M   
Sbjct: 449 CREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNE 508

Query: 549 KIYRSFSASYAKDN---EILDLFWSHVVDRGLMSKHIFKEMQLR 589
             Y       A +    E  DL    +  RG++ K +  +  +R
Sbjct: 509 STYTILIEGLAYEGLIKEARDLL-DELCSRGVVRKSLINKGAIR 551



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 103/378 (27%), Positives = 199/378 (52%), Gaps = 10/378 (2%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMT--QDGLQVFDQMRVHNLMPHLHACTVL 171
           +VL+ +++    PD    V+++ ++  A  K +  +  +++ D+MR     P +    V+
Sbjct: 179 AVLDEMLRRRCVPD----VVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVV 234

Query: 172 LNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDV 231
           +N + ++   D   +  K +   G   N   YN+++   C +   +  E+L+ EM  K  
Sbjct: 235 VNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGC 294

Query: 232 RADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARR 291
             ++ T+N LI+  C+KG+   AL V +++ + G +P+ ++YN L+H FC++ +M +A  
Sbjct: 295 PPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKA-M 353

Query: 292 LFRDI---KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
            F D+   +G  P+ V+Y TL+   CR+ +++ A+ L   +  KG  P +++YN+++  L
Sbjct: 354 AFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGL 413

Query: 349 CKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ 408
            K G+ ++A  LLNEM  K + PD +T +T+    C+      A++   ++ + G+  + 
Sbjct: 414 TKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNT 473

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
             Y A+I G CK +E   A +L   M+  G  P+  +Y+ L++G   +   +    LLDE
Sbjct: 474 VLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDE 533

Query: 469 FVSRGLCVDVSVYRALIR 486
             SRG+     + +  IR
Sbjct: 534 LCSRGVVRKSLINKGAIR 551



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 110/382 (28%), Positives = 180/382 (47%), Gaps = 2/382 (0%)

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
           P  +    L+  L     T     V  +M++   V ++  Y +L+ A CK S   +  KL
Sbjct: 156 PDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKL 215

Query: 223 LCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR 282
           L EM  K    D+ TYN ++   C++G   +A+     +   G  P+ V+YN ++ G C 
Sbjct: 216 LDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCT 275

Query: 283 EGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVT 340
             R  +A  L  ++  KG  PN VT+  LI   CR   +E AL + E +   G  P  ++
Sbjct: 276 AERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLS 335

Query: 341 YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML 400
           YN +L   CK+ ++  A   L+ M  +   PD V+ NTL+ A C+ G+   A+++ +++ 
Sbjct: 336 YNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLK 395

Query: 401 EAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEE 460
           + G      +Y  +I G  KA +   A ELL  M+  G  P   +YS +  G C ++  E
Sbjct: 396 DKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIE 455

Query: 461 ALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLA 520
             ++   +    G+  +  +Y A+I   CK+ +   A  LF  M GNG + +   YT L 
Sbjct: 456 DAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILI 515

Query: 521 YAYWRAGEPKACSDILDDMYRR 542
                 G  K   D+LD++  R
Sbjct: 516 EGLAYEGLIKEARDLLDELCSR 537



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 100/393 (25%), Positives = 187/393 (47%), Gaps = 4/393 (1%)

Query: 125 DPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMV 184
           +PD  ++  + L+        T + L V D+M     +P +   T+LL +  K       
Sbjct: 155 EPD--AYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQA 212

Query: 185 WKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIAL 244
            K+  +M   G   +I  YNV+++  C+   VD   + L  +       +  +YN ++  
Sbjct: 213 MKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKG 272

Query: 245 YCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPN 302
            C      +A  +   M ++G  P++VT+N LI   CR+G +  A  +   I   G TPN
Sbjct: 273 LCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPN 332

Query: 303 HVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLN 362
            ++Y  L+  +C+   +++A+   ++M ++G YP +V+YN++L  LC+ G +  A  LL+
Sbjct: 333 SLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLH 392

Query: 363 EMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAK 422
           ++ +K  AP  ++ NT+I+   K G T  A+++ N M+  GL  D  TY  +  G C+  
Sbjct: 393 QLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCRED 452

Query: 423 EMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYR 482
            ++ A      + D G  P+   Y+ ++ G C +    + + L    +  G   + S Y 
Sbjct: 453 RIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYT 512

Query: 483 ALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVI 515
            LI     +  +  A+ L + +   G++  S+I
Sbjct: 513 ILIEGLAYEGLIKEARDLLDELCSRGVVRKSLI 545



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 91/318 (28%), Positives = 145/318 (45%), Gaps = 10/318 (3%)

Query: 247 KKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGATPNHVTY 306
           ++G   EAL +     R    PD  T  +LI      GR  EARR+   +    P+ + Y
Sbjct: 77  RRGELDEALRLVGSARR----PDAGTCAALIKKLSASGRTAEARRV---LAACGPDVMAY 129

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
             ++ GYC A  L+ A RL   +A   V P   TYN+++R LC  GR  +A  +L+EM  
Sbjct: 130 NAMVAGYCGAGQLDAARRL---VAEMPVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLR 186

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
           ++  PD VT   L+ A CK      AMK+ + M + G   D  TY  +++G C+   +D 
Sbjct: 187 RRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDD 246

Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
           A E L  +   G  P+  SY+ ++ G C     E   +L+ E   +G   +V  +  LI 
Sbjct: 247 AIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLIS 306

Query: 487 RFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMI 546
             C+K  V+ A  +   +   G   +S+ Y  L +A+ +  +       LD M  R    
Sbjct: 307 FLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYP 366

Query: 547 TLKIYRSFSASYAKDNEI 564
            +  Y +   +  +  E+
Sbjct: 367 DIVSYNTLLTALCRSGEV 384


>gi|449530582|ref|XP_004172273.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Cucumis sativus]
          Length = 505

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 120/403 (29%), Positives = 204/403 (50%), Gaps = 12/403 (2%)

Query: 135 WLVI--FYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMV 192
           W+ I  F  N  +++ G ++  QM    + P++   T+L+ +  ++   D    ++ +M 
Sbjct: 111 WITIKAFCENGNVSK-GFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMD 169

Query: 193 QLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHY 252
            LG+ AN ++Y ++I+   K        +L  +M+   V  +L+TYN+LI  YC+ G   
Sbjct: 170 DLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLS 229

Query: 253 EALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGA--TPNHVTYTTLI 310
            A  V D + + G++ + VTYN LI G CR+G++ +A  L   +K A   P   T+  L+
Sbjct: 230 LAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLM 289

Query: 311 DGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIA 370
           DG C    L++AL   E +   G+ P +VTYN ++    K G     + L+ EM ++ I+
Sbjct: 290 DGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGIS 349

Query: 371 PDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL 430
           P  VT   L+N + +  D   A ++ + M   GL+ DQ TY  LIHG C    M  A +L
Sbjct: 350 PSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKL 409

Query: 431 LFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCK 490
              M++    P+   Y+ +++GYC + N    LK L+E V  G+  +V+ Y + I+  CK
Sbjct: 410 YKSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQILCK 469

Query: 491 KEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACS 533
             K   A+RL   M   G+     + +       + G+ K+C+
Sbjct: 470 DGKSIEAKRLLKEMTEAGLKPPESLCS-------KVGQAKSCA 505



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 95/321 (29%), Positives = 172/321 (53%), Gaps = 4/321 (1%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N ++ + ++  +      +DG +++ +M++  ++P+L+    L+    +D    + +KV+
Sbjct: 176 NQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVF 235

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
            ++ + GV  N   YN+LI   C+   V K E LL  M+   +     T+N L+   C  
Sbjct: 236 DEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNT 295

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTY 306
           G   +AL+  ++++  G+ P +VTYN LI GF + G       L R++  +G +P+ VTY
Sbjct: 296 GQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTY 355

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
           T L++ + R++D+E+A  +  +M   G+ P   TY  ++  LC +G + +A++L   M E
Sbjct: 356 TILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVE 415

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
             + P++V  NT+IN YCK  ++  A+K    M++ G+  +  +Y + I   CK  +   
Sbjct: 416 MHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQILCKDGKSIE 475

Query: 427 AKELLFGMLDAGFSP--SYCS 445
           AK LL  M +AG  P  S CS
Sbjct: 476 AKRLLKEMTEAGLKPPESLCS 496



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 113/426 (26%), Positives = 194/426 (45%), Gaps = 5/426 (1%)

Query: 144 KMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVA-NIHL 202
           ++ +  L  F  M +    P   +    L+ LAK    D  W  + +   LG    +++ 
Sbjct: 52  QLLEQSLDGFKLMVLKGHSPSSFSFNNALDLLAKSGNLDRTWGFFTEY--LGRTQFDVYS 109

Query: 203 YNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRME 262
           + + I A C++ +V K  +LL +ME   V  ++F Y  LI   C+ G   +A  +  RM+
Sbjct: 110 FWITIKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMD 169

Query: 263 REGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLE 320
             G++ +   Y  +I+GF ++G  ++   L++ +K  G  PN  TY +LI  YCR   L 
Sbjct: 170 DLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLS 229

Query: 321 EALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLI 380
            A ++ + ++ +GV    VTYN ++  LC++G++  A  LL  M    I P   T N L+
Sbjct: 230 LAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLM 289

Query: 381 NAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFS 440
           +  C  G    A+    ++   GL     TY  LI GF K     +  EL+  M D G S
Sbjct: 290 DGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGIS 349

Query: 441 PSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRL 500
           PS  +Y+ L++ +   ++ E   ++       GL  D   Y  LI   C K  +  A +L
Sbjct: 350 PSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKL 409

Query: 501 FNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAK 560
           +  M    +  + VIY ++   Y +          L++M +  +   +  Y S      K
Sbjct: 410 YKSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQILCK 469

Query: 561 DNEILD 566
           D + ++
Sbjct: 470 DGKSIE 475



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 96/393 (24%), Positives = 182/393 (46%), Gaps = 3/393 (0%)

Query: 171 LLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKD 230
           ++N+  + +L +     +K MV  G   +   +N  +    KS ++D+      E     
Sbjct: 44  VINASLQSQLLEQSLDGFKLMVLKGHSPSSFSFNNALDLLAKSGNLDRTWGFFTEY-LGR 102

Query: 231 VRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREAR 290
            + D++++   I  +C+ G   +   +  +ME  G+SP++  Y  LI   CR G + +A+
Sbjct: 103 TQFDVYSFWITIKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAK 162

Query: 291 RLFR--DIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
            +F   D  G   N   YT +I+G+ +    ++   L + M   GV P + TYNS++ + 
Sbjct: 163 VMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEY 222

Query: 349 CKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ 408
           C++G++  A ++ +E++++ +A + VT N LI   C+ G  + A  +  RM  A +    
Sbjct: 223 CRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTT 282

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
            T+  L+ G C   ++D A   L  +   G  P+  +Y+ L+ G+    N   + +L+ E
Sbjct: 283 RTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVRE 342

Query: 469 FVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
              RG+      Y  L+  F + + ++ A  +F+LM+  G++ D   Y  L +     G 
Sbjct: 343 MEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGN 402

Query: 529 PKACSDILDDMYRRRLMITLKIYRSFSASYAKD 561
               S +   M    L     IY +    Y K+
Sbjct: 403 MVEASKLYKSMVEMHLQPNDVIYNTMINGYCKE 435


>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
 gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
          Length = 609

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 113/351 (32%), Positives = 190/351 (54%), Gaps = 7/351 (1%)

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEM-EFKDVRADLFTYNTLIALYCKKGMHYEA 254
           V  N   YNV+++  CK+    K  ++L EM + K V  DL TY+T+I  +CK+G    A
Sbjct: 5   VAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRA 64

Query: 255 LAV-QDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLID 311
             + ++ + R+G++PD+VTY S++ G CR+G+M  A  + R+  +KG  P+  T++ LI 
Sbjct: 65  CEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALIT 124

Query: 312 GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIA- 370
           G+C A  ++EAL+L + +         V+ ++++  LC+E RI +A  L  EM  ++   
Sbjct: 125 GWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGA 184

Query: 371 --PDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAK 428
             PD VT   LI+ +CK G+   AMK+   M     + +  TY +L+HG CKA ++D A 
Sbjct: 185 WKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQAL 244

Query: 429 ELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRF 488
           +L   M   G  P+  +Y+ L+ G C  +  +A   L+DE  +     D   Y AL+  +
Sbjct: 245 DLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGY 304

Query: 489 CKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
           C+  +++ A++LF  M     L D + YT L   +  A   +    +L++M
Sbjct: 305 CRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENM 355



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 120/400 (30%), Positives = 203/400 (50%), Gaps = 8/400 (2%)

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVA-NIHLYNVLIHACCKSSDVDKVEK 221
           P+     V++N L K RLT   ++V K+M     VA ++  Y+ +I+  CK  ++D+  +
Sbjct: 7   PNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACE 66

Query: 222 LLCEMEFKDVRA-DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGF 280
           +L EM  +D  A D+ TY +++   C+ G    A  +   M+ +G+ PD  T+++LI G+
Sbjct: 67  ILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGW 126

Query: 281 CREGRMREARRLFRDIKGATP--NHVTYTTLIDGYCRANDLEEALRLREVMAAK--GVY- 335
           C   ++ EA +L+++I  ++   + V+ + LI G CR   + EA  L + M  +  G + 
Sbjct: 127 CNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWK 186

Query: 336 PGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKV 395
           P VVTY +++   CK G +  A ++L  M  +K  P+ VT ++L++  CK GD   A+ +
Sbjct: 187 PDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDL 246

Query: 396 KNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCN 455
             RM   G + +  TY  LIHG C A ++D A+ L+  M          SY+ L+DGYC 
Sbjct: 247 FRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCR 306

Query: 456 KNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF-NLMQGNGILGDSV 514
               E   +L  E  ++    D   Y  L+R FC   +++ A+ L  N+    GI  D V
Sbjct: 307 LGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVV 366

Query: 515 IYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSF 554
            Y+ +   Y RA      ++ + +M  R +      Y S 
Sbjct: 367 TYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSL 406



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 117/407 (28%), Positives = 201/407 (49%), Gaps = 8/407 (1%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMR-VHNLMPHLHACTVLLNSLAKDRLTDMVWKV 187
           N    + +V      ++T    +V  +MR   ++ P L   + ++N   K    D   ++
Sbjct: 8   NERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEI 67

Query: 188 YKKMV-QLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYC 246
            ++MV + G+  ++  Y  ++   C+   +D+  +++ EM+ K V  D FT++ LI  +C
Sbjct: 68  LREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWC 127

Query: 247 KKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK----GA-TP 301
                 EAL +   +       D V+ ++LI G CRE R+ EA  LF++++    GA  P
Sbjct: 128 NARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWKP 187

Query: 302 NHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLL 361
           + VTYT LIDG+C++ +LE+A+++  VM  +   P VVTY+S+L  LCK G +  A  L 
Sbjct: 188 DVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLF 247

Query: 362 NEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKA 421
             M  K   P+ VT  TLI+  C      +A  + + M       D  +Y AL+ G+C+ 
Sbjct: 248 RRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRL 307

Query: 422 KEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNN-EEALLKLLDEFVSRGLCVDVSV 480
             ++ AK+L   M      P   +Y+ LV G+CN +  EEA   L +   + G+  DV  
Sbjct: 308 GRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVT 367

Query: 481 YRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
           Y  ++  + + ++   A      M    +  ++V Y+SL     +AG
Sbjct: 368 YSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAG 414



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 130/493 (26%), Positives = 234/493 (47%), Gaps = 35/493 (7%)

Query: 78  LQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLST-----PSVLNALVKIHD-------- 124
           L ++ T+I+   K      A  +L ++  RD ++       SV++ L +           
Sbjct: 45  LVTYSTVINGFCKQGEMDRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMV 104

Query: 125 --------DPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLA 176
                   +PD      S L+  + N +   + L+++ ++   +      + + L+  L 
Sbjct: 105 REMKLKGVEPD--KFTFSALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLC 162

Query: 177 KDRLTDMVWKVYKKMVQLGVVA---NIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
           ++R     ++++++M      A   ++  Y  LI   CKS +++K  K+L  ME +    
Sbjct: 163 RERRIGEAYELFQEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVP 222

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           ++ TY++L+   CK G   +AL +  RM  +G  P++VTY +LIHG C   ++ +A RL 
Sbjct: 223 NVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKV-DAARLL 281

Query: 294 RDIKGAT---PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
            D   AT    + V+Y  L+DGYCR   +EEA +L + MAAK   P  +TY  ++R  C 
Sbjct: 282 MDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCN 341

Query: 351 EGRIRDANRLLNEM-NEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQF 409
             R+ +A  LL  M     I PD VT + ++  Y +      A +    M+   +  +  
Sbjct: 342 ASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAV 401

Query: 410 TYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEF 469
           TY +LI G CKA  ++ A E+L  +      P   +Y+ +++G C  +  E  L LL+E 
Sbjct: 402 TYSSLIDGLCKAGRVNHAMEVLKNV----DKPDVVTYTIVIEGLCGTDRTEEALTLLEEM 457

Query: 470 VSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEP 529
           V++ +   V  + ++I   C+   +D A +L   M  +G+    V YT+L   + R G  
Sbjct: 458 VNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRM 517

Query: 530 KACSDILDDMYRR 542
           +   ++ + M R+
Sbjct: 518 EIAYELFEVMRRK 530



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 109/368 (29%), Positives = 164/368 (44%), Gaps = 43/368 (11%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           +  +++   M     +P++   + LL+ L K    D    ++++M   G V N+  Y  L
Sbjct: 206 EKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTL 265

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           IH  C +  VD    L+ EM      AD  +YN L+  YC+ G   EA  +   M  +  
Sbjct: 266 IHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSC 325

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDIK---GATPNHVTYTTLIDGYCRANDLEEAL 323
            PD +TY  L+ GFC   R+ EAR L  ++K   G  P+ VTY+ ++ GY RA    EA 
Sbjct: 326 LPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAA 385

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRI----------------------------- 354
              + M A+ V P  VTY+S++  LCK GR+                             
Sbjct: 386 EFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVDKPDVVTYTIVIEGLCGTD 445

Query: 355 --RDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYK 412
              +A  LL EM  K++ P   T N++I A C++GD   A K+   M   GL     TY 
Sbjct: 446 RTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYT 505

Query: 413 ALIHGFCKAKEMDIAKELLFGML--------DAGFSPSYCSYSWLVDGYCNKNNEEALLK 464
            L+ GF +   M+IA EL   M          A   P   ++S L+ G C     +  + 
Sbjct: 506 TLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVPEQ-AFSALIRGLCKAREIDKAMA 564

Query: 465 LLDEFVSR 472
           +++E  SR
Sbjct: 565 VVEELRSR 572



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 101/335 (30%), Positives = 169/335 (50%), Gaps = 19/335 (5%)

Query: 263 REGISPDIVTYNSLIHGFCR---EGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDL 319
           RE ++P+  TYN +++G C+     +  E  +  RD K   P+ VTY+T+I+G+C+  ++
Sbjct: 2   REFVAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEM 61

Query: 320 EEALR-LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT 378
           + A   LRE++   G+ P VVTY S++  LC++G++  A  ++ EM  K + PD  T + 
Sbjct: 62  DRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSA 121

Query: 379 LINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGM---L 435
           LI  +C       A+K+   +L +   LD  +  ALI G C+ + +  A EL   M    
Sbjct: 122 LITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMRE 181

Query: 436 DAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVD 495
           D  + P   +Y+ L+DG+C   N E  +K+L     R    +V  Y +L+   CK   +D
Sbjct: 182 DGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLD 241

Query: 496 YAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFS 555
            A  LF  M   G + + V YT+L +    A +  A   ++D+M       T     + +
Sbjct: 242 QALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEM-------TATCCPADT 294

Query: 556 ASYAKDNEILDLFWSHVVDRGLMSKHIFKEMQLRN 590
            SY   N +LD +    + R   +K +FKEM  ++
Sbjct: 295 VSY---NALLDGYCR--LGRIEEAKQLFKEMAAKS 324


>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 614

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 118/371 (31%), Positives = 188/371 (50%), Gaps = 2/371 (0%)

Query: 171 LLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKD 230
           L+N L K   T    +V +K+  L V  N+ +YN +I + CK   V     L  EM  K 
Sbjct: 175 LINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKR 234

Query: 231 VRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREAR 290
           +  D+ TY TLI      G   EA+ + ++M  + I PD+ T+N L+ G C+EG M++AR
Sbjct: 235 IFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKAR 294

Query: 291 RLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
            +   +  +G   N VTY +L+DGY       +A  +   MA +GV P V +Y+ ++  L
Sbjct: 295 NVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGL 354

Query: 349 CKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ 408
           CK   + +A  L  EM+ K +AP+ VT N+LI+   K G  + A  + N M   G   D 
Sbjct: 355 CKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADV 414

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
            TY +L+   CK  ++D A  L+  + D G  P+  +Y+ LVDG C     +    +  +
Sbjct: 415 ITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQD 474

Query: 469 FVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
            + +G  +DV +Y  ++   CK+   D A  L + M+ NG + D+V Y +L  A +   +
Sbjct: 475 LLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVRALFENDK 534

Query: 529 PKACSDILDDM 539
                 +L +M
Sbjct: 535 NDKAVKLLREM 545



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 110/342 (32%), Positives = 173/342 (50%), Gaps = 2/342 (0%)

Query: 225 EMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREG 284
           +ME K ++ DLFT+N LI  +C  G    A +V  ++ + G  PD VT  +LI G C  G
Sbjct: 89  QMELKQIQPDLFTFNILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNG 148

Query: 285 RMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYN 342
           ++REA     D+  KG   + V+Y TLI+G C+  +   AL++   +    V P VV YN
Sbjct: 149 KVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYN 208

Query: 343 SILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEA 402
           +I+  LCK+  +  A+ L +EM  K+I PD VT  TLI     +G    A+ + N+ML  
Sbjct: 209 TIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLK 268

Query: 403 GLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEAL 462
            +  D +T+  L+ G CK  EM  A+ +L  M+  G   +  +Y+ L+DGY     E   
Sbjct: 269 NIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKA 328

Query: 463 LKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYA 522
             + +    RG+  DV  Y  +I   CK + VD A  LF  M    +  ++V Y SL   
Sbjct: 329 TFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDG 388

Query: 523 YWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
             + G      D++++M+ R     +  Y S   +  K++++
Sbjct: 389 LLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQV 430



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 121/440 (27%), Positives = 198/440 (45%), Gaps = 6/440 (1%)

Query: 155 QMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSS 214
           QM +  + P L    +L+N        +  + V  K+ +LG   +      LI   C + 
Sbjct: 89  QMELKQIQPDLFTFNILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNG 148

Query: 215 DVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYN 274
            V +      ++  K    D  +Y TLI   CK G    AL V  +++   + P++V YN
Sbjct: 149 KVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYN 208

Query: 275 SLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAK 332
           ++I   C++  +  A  L  +  +K   P+ VTYTTLI G      L+EA+ L   M  K
Sbjct: 209 TIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLK 268

Query: 333 GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
            + P V T+N ++  LCKEG ++ A  +L  M ++ +  + VT N+L++ Y  +     A
Sbjct: 269 NIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKA 328

Query: 393 MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
             V N M   G+  D  +Y  +I+G CK K +D A  L   M     +P+  +Y+ L+DG
Sbjct: 329 TFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDG 388

Query: 453 YCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGD 512
                       L++E  +RG   DV  Y +L+   CK  +VD A  L   ++  GI  +
Sbjct: 389 LLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPN 448

Query: 513 SVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKD---NEILDLFW 569
              YT L     + G  K    +  D+  +   + +K+Y        K+   +E L L  
Sbjct: 449 IYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLV- 507

Query: 570 SHVVDRGLMSKHIFKEMQLR 589
           S + D G +   +  E  +R
Sbjct: 508 SKMEDNGCIPDAVTYETLVR 527



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 165/329 (50%), Gaps = 4/329 (1%)

Query: 155 QMRVHNLMPHLHACTVLL-NSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKS 213
           +M V  + P +   T L+   L   RL + V  ++ +M+   +  +++ +N+L+   CK 
Sbjct: 229 EMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVG-LFNQMLLKNIKPDVYTFNILVDGLCKE 287

Query: 214 SDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTY 273
            ++ K   +L  M  + V +++ TYN+L+  Y       +A  V + M R G++PD+ +Y
Sbjct: 288 GEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSY 347

Query: 274 NSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAA 331
           + +I+G C+   + EA  LF+++  K   PN VTY +LIDG  +   + +A  L   M  
Sbjct: 348 SIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHN 407

Query: 332 KGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTAS 391
           +G    V+TY+S+L  LCK  ++  A  L+ ++ ++ I P+  T   L++  CK G    
Sbjct: 408 RGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKD 467

Query: 392 AMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVD 451
           A  V   +L  G  LD   Y  +++G CK    D A  L+  M D G  P   +Y  LV 
Sbjct: 468 AQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVR 527

Query: 452 GYCNKNNEEALLKLLDEFVSRGLCVDVSV 480
                +  +  +KLL E + +G  V  ++
Sbjct: 528 ALFENDKNDKAVKLLREMIVQGSAVGSNI 556


>gi|222628658|gb|EEE60790.1| hypothetical protein OsJ_14375 [Oryza sativa Japonica Group]
          Length = 754

 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 122/477 (25%), Positives = 222/477 (46%), Gaps = 40/477 (8%)

Query: 126 PDGNSHVLSWLVIF--YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDM 183
           P+    + ++ ++   Y   +    GL VF ++    L P + +   L++  +K+   D 
Sbjct: 112 PEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDK 171

Query: 184 VWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIA 243
              ++ KM + G++ N+  Y+ LI+  CK+ ++DK E++L +M    VR +  TYN LI 
Sbjct: 172 AHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIH 231

Query: 244 LYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATP 301
            Y   GM  E++ V   M    + PD+   NS +   C+ GR++EAR +F    +KG  P
Sbjct: 232 GYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKP 291

Query: 302 NHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLL 361
           + ++Y  L+ GY  A  +     L  VM  +GV P    +N+++    + G +  +  + 
Sbjct: 292 DVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMF 351

Query: 362 NEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKA 421
            +M ++ + PD +T +T+I+A+C++G    AM+  N M++ G+  D   Y  LI G C  
Sbjct: 352 EDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNR 411

Query: 422 KEMDIAKELLFGMLDAGFS------------------------------------PSYCS 445
           +++  AKEL+  ML  G                                      P+  +
Sbjct: 412 RDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLIT 471

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           ++ LVDGYC   N +  + LLD   S G+  D+  Y  L+  +CK  ++D A  LF  M 
Sbjct: 472 FNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDML 531

Query: 506 GNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDN 562
              +   SV Y  + +  ++A       ++  +M    + +++  Y +      ++N
Sbjct: 532 HKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNN 588



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 122/508 (24%), Positives = 234/508 (46%), Gaps = 25/508 (4%)

Query: 63  FFKWAESAV-PNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVK 121
           F+K  E  + PN    + ++ ++I+ L K K    A+ +L ++           + A V+
Sbjct: 176 FYKMEEQGIMPN----VVTYSSLINGLCKTKEMDKAERVLRQM-----------VGAGVR 220

Query: 122 IHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLT 181
                  N+   + L+  Y+   M ++ ++VF +M    L+P +  C   + +L K    
Sbjct: 221 ------PNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRI 274

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
                ++  MV  G   ++  Y  L+H    +  +  ++ L   M  + V  D   +NTL
Sbjct: 275 KEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTL 334

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGA 299
           I  Y + GM  ++L + + M ++G++PDI+T++++I  FCR GR+ +A   F  +   G 
Sbjct: 335 INAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGV 394

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTY-NSILRKLCKEGRIRDAN 358
            P+   Y+ LI G C   DL +A  L   M +KG+ P  + +  SI+  LCKEGR+ +  
Sbjct: 395 PPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGK 454

Query: 359 RLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGF 418
            +++ +      P+ +T N+L++ YC +G+   A+ + + M   G+  D +TY  L+ G+
Sbjct: 455 DVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGY 514

Query: 419 CKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDV 478
           CK   +D A  L   ML    + +  SY+ ++ G           ++  E +  G+ V +
Sbjct: 515 CKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSI 574

Query: 479 SVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDD 538
             Y  ++   C+    D A  L   +    +  D + +  +  A ++ G  +   ++   
Sbjct: 575 HTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAA 634

Query: 539 MYRRRLMITLKIYRSFSASYAKDNEILD 566
           +    L+ T+  YR    +  K+    D
Sbjct: 635 ISTYGLVPTILTYRVMITNLIKEESFED 662



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 108/407 (26%), Positives = 196/407 (48%), Gaps = 3/407 (0%)

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
           P ++   +L+N   + R  D+   V+ ++++ G+  ++  YN LI    K  +VDK   L
Sbjct: 116 PTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDL 175

Query: 223 LCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR 282
             +ME + +  ++ TY++LI   CK     +A  V  +M   G+ P+ +TYN LIHG+  
Sbjct: 176 FYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYST 235

Query: 283 EGRMREARRLFRDIKGA--TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVT 340
            G  +E+ R+F+++  +   P+     + +   C+   ++EA  + + M  KG  P V++
Sbjct: 236 SGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVIS 295

Query: 341 YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML 400
           Y ++L      G I   + L N M  + + PD    NTLINAY ++G    ++ +   M 
Sbjct: 296 YGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMT 355

Query: 401 EAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEE 460
           + G+  D  T+  +I  FC+   +D A E    M+D G  P    YS L+ G CN+ +  
Sbjct: 356 KQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLV 415

Query: 461 ALLKLLDEFVSRGLCVD-VSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
              +L+ + +S+G+    +  + ++I   CK+ +V   + + +L+   G   + + + SL
Sbjct: 416 KAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSL 475

Query: 520 AYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
              Y   G  K    +LD M    +   +  Y +    Y K   I D
Sbjct: 476 VDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDD 522



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 109/417 (26%), Positives = 187/417 (44%), Gaps = 5/417 (1%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAK-DRLTDMVWKV 187
           + HV + L+  YA L M    L +F+ M    + P +   + ++++  +  RL D + K 
Sbjct: 327 DRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEK- 385

Query: 188 YKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNT-LIALYC 246
           +  M+  GV  +  +Y+ LI   C   D+ K ++L+ +M  K +      + T +I   C
Sbjct: 386 FNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLC 445

Query: 247 KKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHV 304
           K+G   E   V D +   G  P+++T+NSL+ G+C  G M+EA  L   ++  G  P+  
Sbjct: 446 KEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIY 505

Query: 305 TYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM 364
           TY TL+DGYC+   +++AL L   M  K V    V+YN IL  L +  R   A  + +EM
Sbjct: 506 TYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEM 565

Query: 365 NEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEM 424
            E  +A    T  T++   C+   T  A  +  ++    +  D  T+  +I    K    
Sbjct: 566 IESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRR 625

Query: 425 DIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRAL 484
             AKEL   +   G  P+  +Y  ++     + + E    L           D  +   +
Sbjct: 626 QEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEI 685

Query: 485 IRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
           IR    K +V  A    + +   GIL ++   + L Y +   G+ +    +L + YR
Sbjct: 686 IRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYREYIKLLPEKYR 742



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 135/281 (48%), Gaps = 7/281 (2%)

Query: 254 ALAVQ--DRMER---EGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTY 306
           ALAV+   RM+R      +P I TYN LI+ + R  R      +F  +   G  P+  +Y
Sbjct: 97  ALAVELFKRMDRCACPEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSY 156

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
             LIDG+ +  ++++A  L   M  +G+ P VVTY+S++  LCK   +  A R+L +M  
Sbjct: 157 NALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVG 216

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
             + P+N+T N LI+ Y   G    +++V   M  + L+ D     + +   CK   +  
Sbjct: 217 AGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKE 276

Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
           A+++   M+  G  P   SY  L+ GY        +  L +  V  G+  D  V+  LI 
Sbjct: 277 ARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLIN 336

Query: 487 RFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
            + +   +D +  +F  M   G+  D + ++++  A+ R G
Sbjct: 337 AYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLG 377



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/220 (27%), Positives = 95/220 (43%), Gaps = 3/220 (1%)

Query: 370 APDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKE 429
           AP   T N LIN Y +       + V  R+L  GL  D F+Y ALI GF K  E+D A +
Sbjct: 115 APTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHD 174

Query: 430 LLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFC 489
           L + M + G  P+  +YS L++G C     +   ++L + V  G+  +   Y  LI  + 
Sbjct: 175 LFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYS 234

Query: 490 KKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLK 549
                  + R+F  M  + ++ D     S   A  + G  K   DI D M  +     + 
Sbjct: 235 TSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVI 294

Query: 550 IYRSFSASYAKDNEIL---DLFWSHVVDRGLMSKHIFKEM 586
            Y +    YA    I    +LF   V +  +  +H+F  +
Sbjct: 295 SYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTL 334


>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
 gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
          Length = 457

 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 114/358 (31%), Positives = 171/358 (47%), Gaps = 2/358 (0%)

Query: 171 LLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKD 230
           LL  LAK    D V+  Y  M+  G V N + Y  L+ + C++   ++   +   M  + 
Sbjct: 23  LLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQG 82

Query: 231 VRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREAR 290
              ++F+Y+ LIA  C+     EA  + + M   G  P++VTY SL+ G C+ G+++EA 
Sbjct: 83  CSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAV 142

Query: 291 RLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
            LF  +  +G  P+ V Y  LIDG+ +  D+ EA RL E M  KG  P V TYNS+L   
Sbjct: 143 DLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGF 202

Query: 349 CKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ 408
            ++G       L  +M  +   P+  T N L++ +CK+GD   A ++   M   G   D 
Sbjct: 203 SRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDV 262

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
            +Y  LI G C   +   A+ LL  M+ +G  P   SY+ L+DGY      +  +KL  E
Sbjct: 263 VSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYE 322

Query: 469 FVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRA 526
               GL  D   Y  +I   C+  KV  A  +F  M  NG   D+ +   L     R 
Sbjct: 323 IPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRG 380



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 127/459 (27%), Positives = 210/459 (45%), Gaps = 26/459 (5%)

Query: 62  AFFKWAESAVPNYKHSLQSHWTMIHILTKNK---HFKSAQNMLEKIALRDFLSTPSVLNA 118
           AFF+WA S V +Y H   S+  ++ +L K+    H     N        D L+   V N 
Sbjct: 2   AFFQWAGSQV-HYNHGTLSYNYLLEVLAKSGRCDHVYGTYN--------DMLAAGCVPN- 51

Query: 119 LVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKD 178
                      ++   +L+      +  ++   VF  M      P++ + ++L+  L + 
Sbjct: 52  -----------TYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRG 100

Query: 179 RLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTY 238
           +  D   ++  +M+  G   N+  Y  L+   CK   + +   L   M ++    D   Y
Sbjct: 101 QKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVY 160

Query: 239 NTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI-- 296
           N LI  + KKG   EA  + + M  +G  P + TYNSL+ GF R+G     + LF+D+  
Sbjct: 161 NVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLR 220

Query: 297 KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRD 356
           +G  PN  T+  L+DG+C+  D+ EA RL   M + G  P VV+YN+++R +C +G+  +
Sbjct: 221 QGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHE 280

Query: 357 ANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIH 416
           A RLL EM    + PD V+ N LI+ Y K G    A+K+   + ++GL  D F+Y  +I 
Sbjct: 281 AQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIID 340

Query: 417 GFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCV 476
             C+A ++  A  +   M+  G +P       LV G C         +L    V      
Sbjct: 341 CLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVP 400

Query: 477 DVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVI 515
            +  Y  L+ + CK ++ D    +F+ +   G   D  I
Sbjct: 401 LIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEI 439



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 101/294 (34%), Positives = 144/294 (48%), Gaps = 2/294 (0%)

Query: 236 FTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD 295
            +YN L+ +  K G         + M   G  P+  TY  L+   C+  R  EAR +FR 
Sbjct: 18  LSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRG 77

Query: 296 I--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGR 353
           +  +G +PN  +Y+ LI G CR   ++EA  L   M   G  P VVTY S+L  LCK G+
Sbjct: 78  MAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGK 137

Query: 354 IRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKA 413
           +++A  L + M  +   PD V  N LI+ + K GD   A ++   MLE G +   FTY +
Sbjct: 138 LKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNS 197

Query: 414 LIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
           L+ GF +  E    + L   ML  G  P+  +++ L+DG+C   +     +L  E  S G
Sbjct: 198 LLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLG 257

Query: 474 LCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
              DV  Y  LIR  C K K   AQRL   M  +G+  D V Y  L   Y ++G
Sbjct: 258 CPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSG 311



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 105/339 (30%), Positives = 164/339 (48%), Gaps = 2/339 (0%)

Query: 203 YNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRME 262
           YN L+    KS   D V     +M       + +TY  L+   C+     EA +V   M 
Sbjct: 20  YNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMA 79

Query: 263 REGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLE 320
            +G SP++ +Y+ LI G CR  ++ EA  L  ++   G  PN VTY +L+ G C+   L+
Sbjct: 80  AQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLK 139

Query: 321 EALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLI 380
           EA+ L   M  +G  P  V YN ++    K+G + +A RL  EM EK   P   T N+L+
Sbjct: 140 EAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLL 199

Query: 381 NAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFS 440
           + + + G+      +   ML  G + + FT+  L+ GFCK  +M  A  L   M   G  
Sbjct: 200 SGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCP 259

Query: 441 PSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRL 500
           P   SY+ L+ G C+K       +LL E +  G+  D+  Y  LI  + K   +D+A +L
Sbjct: 260 PDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKL 319

Query: 501 FNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
           F  +  +G+  D+  Y+++     RAG+  A   +  DM
Sbjct: 320 FYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDM 358



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 87/304 (28%), Positives = 142/304 (46%), Gaps = 5/304 (1%)

Query: 271 VTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
           ++YN L+    + GR       + D+   G  PN  TY  L+   C+A   EEA  +   
Sbjct: 18  LSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRG 77

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           MAA+G  P V +Y+ ++  LC+  ++ +A  LLNEM +    P+ VT  +L++  CK+G 
Sbjct: 78  MAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGK 137

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
              A+ + +RM+  G   D   Y  LI GF K  +M  A  L   ML+ G  P+  +Y+ 
Sbjct: 138 LKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNS 197

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG 508
           L+ G+  K     +  L  + + +G   ++  +  L+  FCK   +  A RLF  M+  G
Sbjct: 198 LLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLG 257

Query: 509 ILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI---L 565
              D V Y +L       G+P     +L +M R  +   +  Y      Y+K   +   +
Sbjct: 258 CPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAI 317

Query: 566 DLFW 569
            LF+
Sbjct: 318 KLFY 321



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 99/230 (43%)

Query: 337 GVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVK 396
           G ++YN +L  L K GR        N+M      P+  T   L+ + C+      A  V 
Sbjct: 16  GTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVF 75

Query: 397 NRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNK 456
             M   G   + F+Y  LI G C+ +++D A ELL  M+D G  P+  +Y  L+ G C  
Sbjct: 76  RGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKM 135

Query: 457 NNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIY 516
              +  + L    V RG   D  VY  LI  F KK  +  A RLF  M   G +     Y
Sbjct: 136 GKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTY 195

Query: 517 TSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
            SL   + R GE      +  DM R+  +  +  + +    + K  ++++
Sbjct: 196 NSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVE 245


>gi|242058841|ref|XP_002458566.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
 gi|241930541|gb|EES03686.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
          Length = 796

 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 132/476 (27%), Positives = 203/476 (42%), Gaps = 74/476 (15%)

Query: 153 FDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVA-NIHLYNVLIHACC 211
           F ++      P +  C++L+ +L      D+  KV+ +M     VA ++H Y  +I A C
Sbjct: 163 FLELSARGASPSIKTCSILVEALGCGGQLDVARKVFGEMRDGKTVAPDVHTYTAMIKALC 222

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           ++ ++D    +L E+    ++  + TYN L+   CK G   EA  ++ RM    + P IV
Sbjct: 223 RAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVEGRVRPSIV 282

Query: 272 TYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           T+  LI G  R  +  E   + ++++  G TPN V Y  +I  +CR     EAL+L + M
Sbjct: 283 TFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCSEALKLFDEM 342

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDAN------------------------------- 358
            +KG+   VVTYN I + LCKEG +  A                                
Sbjct: 343 VSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVVAWHLRGTGR 402

Query: 359 -----RLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKV------------------ 395
                RL+ EM  + + P++      I   CK G    A ++                  
Sbjct: 403 LDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNA 462

Query: 396 -------KNRMLEA----------GLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAG 438
                   N M EA          G+ LD+ TY  +I G CKA +MD A +L   M+  G
Sbjct: 463 LIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRG 522

Query: 439 FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQ 498
           F P   +++  +  YCN    E +L LLD+  S GL  D+  Y  +I  +CK + +  A 
Sbjct: 523 FKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKAN 582

Query: 499 RLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSF 554
                +  NG+  ++VIY +L   Y R G       ILD M    +  T   Y S 
Sbjct: 583 EYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSL 638



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 116/423 (27%), Positives = 195/423 (46%), Gaps = 18/423 (4%)

Query: 75  KHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLS 134
           K ++ ++  +   L K    + A+ +L+++ L   +   S+ N++V  H    G   ++ 
Sbjct: 348 KQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVVAWHLRGTGRLDLV- 406

Query: 135 WLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQL 194
                          L++  +M    L P+    T  +  L K    +   +++ +++  
Sbjct: 407 ---------------LRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGK 451

Query: 195 GVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEA 254
           G+  N+   N LIH  C+ +++ +  K+L  M    V  D  TYN +I   CK     EA
Sbjct: 452 GLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEA 511

Query: 255 LAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDG 312
           + ++D M + G  PD+ T+N  +H +C  G++ E   L   +K  G  P+ VTY T+IDG
Sbjct: 512 IQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDG 571

Query: 313 YCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPD 372
           YC+A D+ +A      +   G+ P  V YN+++    + G I DA  +L+ M    I P 
Sbjct: 572 YCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPT 631

Query: 373 NVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLF 432
            VT N+L+   C  G       V  + +   + L    Y  +I GFCK  ++D A     
Sbjct: 632 PVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFK 691

Query: 433 GMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKE 492
            M   G  P+  +Y+ L+  Y    N+E   KL DE VS G+  D   Y  LI  FC+ +
Sbjct: 692 EMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFDEMVSLGIVPDSVSYNTLISGFCEVD 751

Query: 493 KVD 495
            +D
Sbjct: 752 SLD 754



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 114/468 (24%), Positives = 229/468 (48%), Gaps = 20/468 (4%)

Query: 75  KHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLS 134
           + S+ +   +I  L + + F     +L++  ++ F  TP               N  + +
Sbjct: 278 RPSIVTFGILISGLARGQQFGEVGAVLQE--MQGFGITP---------------NEVIYN 320

Query: 135 WLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQL 194
            ++ ++       + L++FD+M    +   +    ++  +L K+   +   K+  +M+  
Sbjct: 321 EMIGWHCRKGHCSEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLA 380

Query: 195 GVVANIHLYNVLIHACCKSSD-VDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYE 253
           G++ +  L+N ++    + +  +D V +L+ EM  + ++ +       I   CK G H E
Sbjct: 381 GMMVHCSLFNSVVAWHLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEE 440

Query: 254 ALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLID 311
           A  +  ++  +G+  ++ T N+LIHG C+   M+EA ++ + +   G   + +TY  +I 
Sbjct: 441 AAEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQ 500

Query: 312 GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAP 371
           G C+A+ ++EA++LR+ M  +G  P + T+N  L   C  G++ +   LL++M  + + P
Sbjct: 501 GCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKP 560

Query: 372 DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
           D VT  T+I+ YCK  D   A +    +++ GL  +   Y ALI G+ +   +  A  +L
Sbjct: 561 DIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGIL 620

Query: 432 FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
             M   G  P+  +Y+ L+   C+    E +  +  + + + + + V  Y  +I+ FCK 
Sbjct: 621 DTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKI 680

Query: 492 EKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
            K+D A   F  M   GI  + + YT+L +AY ++G  +  S + D+M
Sbjct: 681 GKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFDEM 728



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 102/358 (28%), Positives = 177/358 (49%), Gaps = 6/358 (1%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           ++  +++ Q+    L  ++     L++ L +        KV K MV  GV  +   YN++
Sbjct: 439 EEAAEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIM 498

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           I  CCK+S +D+  +L  +M  +  + DLFT+N  +  YC  G   E L + D+M+ EG+
Sbjct: 499 IQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGL 558

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
            PDIVTY ++I G+C+   M +A     ++   G  PN V Y  LI GY R  ++ +A+ 
Sbjct: 559 KPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIG 618

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           + + M   G+ P  VTYNS++  +C  G + +   +  +   K I    +    +I  +C
Sbjct: 619 ILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFC 678

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           KIG    A+     M   G+  ++ TY  L+  + K+   + A +L   M+  G  P   
Sbjct: 679 KIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFDEMVSLGIVPDSV 738

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI----RRFCKKEKVDYAQ 498
           SY+ L+ G+C  ++ + +++   E  S+ L  D   Y A +      +C+KE V  A+
Sbjct: 739 SYNTLISGFCEVDSLDKMVESPAEMSSQVLKQDGCSYNAFVDGITTPWCQKEAVSNAE 796



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 110/404 (27%), Positives = 182/404 (45%), Gaps = 8/404 (1%)

Query: 172 LNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEM-EFKD 230
           LNS A   L+      + ++   G   +I   ++L+ A      +D   K+  EM + K 
Sbjct: 148 LNSPAPGSLSRAA-DAFLELSARGASPSIKTCSILVEALGCGGQLDVARKVFGEMRDGKT 206

Query: 231 VRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREAR 290
           V  D+ TY  +I   C+ G    A A+   + R GI P +VTYN L+   C+ GR+ EA 
Sbjct: 207 VAPDVHTYTAMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAF 266

Query: 291 RL-FRDIKG-ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
           RL  R ++G   P+ VT+  LI G  R     E   + + M   G+ P  V YN ++   
Sbjct: 267 RLKGRMVEGRVRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWH 326

Query: 349 CKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ 408
           C++G   +A +L +EM  K I    VT N +  A CK G+   A K+ + ML AG+M+  
Sbjct: 327 CRKGHCSEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHC 386

Query: 409 FTYKALIHGFCKAK-EMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLD 467
             + +++    +    +D+   L+  ML     P+    +  +   C     E   ++  
Sbjct: 387 SLFNSVVAWHLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWF 446

Query: 468 EFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
           + + +GL V+V+   ALI   C+   +  A ++   M  +G+  D + Y  +     +A 
Sbjct: 447 QVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKAS 506

Query: 528 EPKACSDILDDMYRRRLMITLKIYRSFSASY---AKDNEILDLF 568
           +      + DDM +R     L  +  F  +Y    K  EIL L 
Sbjct: 507 KMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLL 550



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 107/416 (25%), Positives = 190/416 (45%), Gaps = 20/416 (4%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSL------AKDRLTDMVWKVYKKMVQLGVVANIHLYN 204
           ++ D+M +  +M H   C+ L NS+         RL D+V ++ ++M+   +  N  L  
Sbjct: 372 KILDEMLLAGMMVH---CS-LFNSVVAWHLRGTGRL-DLVLRLIREMLARFLKPNDALMT 426

Query: 205 VLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMERE 264
             I   CKS   ++  ++  ++  K +  ++ T N LI   C+     EA  V   M   
Sbjct: 427 ACIQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNS 486

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEA 322
           G+  D +TYN +I G C+  +M EA +L  D+  +G  P+  T+   +  YC    +EE 
Sbjct: 487 GVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEI 546

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
           L L + M ++G+ P +VTY +I+   CK   +  AN  L E+ +  + P+ V  N LI  
Sbjct: 547 LHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGG 606

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           Y + G+ + A+ + + M   G+     TY +L++  C A  ++  K +    +       
Sbjct: 607 YGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELG 666

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
              Y+ ++ G+C     +  +    E  SRG+  +   Y  L+  + K    + A +LF+
Sbjct: 667 VIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFD 726

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASY 558
            M   GI+ DSV Y +L   +          D LD M      ++ ++ +    SY
Sbjct: 727 EMVSLGIVPDSVSYNTLISGFCEV-------DSLDKMVESPAEMSSQVLKQDGCSY 775



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 80/333 (24%), Positives = 138/333 (41%), Gaps = 21/333 (6%)

Query: 253 EALAVQDRMEREGISPDIVTY--NSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLI 310
           +A A   R   + +SP + T    SL+        +  ARRL   +    P  V    + 
Sbjct: 76  DAHASASRHAEDLLSPRVSTLLLQSLV---ADRASLPSARRLVSRLLRFNPLSVAAAAIA 132

Query: 311 DGYCRA---------------NDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIR 355
           D +C A                 L  A      ++A+G  P + T + ++  L   G++ 
Sbjct: 133 DSHCTATADLLVRACLNSPAPGSLSRAADAFLELSARGASPSIKTCSILVEALGCGGQLD 192

Query: 356 DANRLLNEMNE-KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKAL 414
            A ++  EM + K +APD  T   +I A C+ G+  +A  +   +  +G+     TY  L
Sbjct: 193 VARKVFGEMRDGKTVAPDVHTYTAMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVL 252

Query: 415 IHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGL 474
           +   CK+  ++ A  L   M++    PS  ++  L+ G         +  +L E    G+
Sbjct: 253 MDALCKSGRVEEAFRLKGRMVEGRVRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGI 312

Query: 475 CVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSD 534
             +  +Y  +I   C+K     A +LF+ M   GI    V Y  +A A  + GE +    
Sbjct: 313 TPNEVIYNEMIGWHCRKGHCSEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEK 372

Query: 535 ILDDMYRRRLMITLKIYRSFSASYAKDNEILDL 567
           ILD+M    +M+   ++ S  A + +    LDL
Sbjct: 373 ILDEMLLAGMMVHCSLFNSVVAWHLRGTGRLDL 405



 Score = 45.8 bits (107), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 27/113 (23%), Positives = 55/113 (48%), Gaps = 2/113 (1%)

Query: 132 VLSWLVIFYANLKMTQ--DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYK 189
           V+ + +I     K+ +  + +  F +M    + P+    T L+ + +K    +   K++ 
Sbjct: 667 VIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFD 726

Query: 190 KMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLI 242
           +MV LG+V +   YN LI   C+   +DK+ +   EM  + ++ D  +YN  +
Sbjct: 727 EMVSLGIVPDSVSYNTLISGFCEVDSLDKMVESPAEMSSQVLKQDGCSYNAFV 779


>gi|356547426|ref|XP_003542113.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Glycine max]
          Length = 825

 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 124/456 (27%), Positives = 217/456 (47%), Gaps = 40/456 (8%)

Query: 124 DDPDG---NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRL 180
           DD  G   +++  S +V    NL   ++G ++         +PH+    ++++   K   
Sbjct: 196 DDGTGAVVDNYTTSIMVKGLCNLGKIEEGRRLIKHRWGKCCVPHVVFYNMIIDGYCKKGD 255

Query: 181 TDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNT 240
                +   ++   GV+  +  Y  LI+  CK+ + + V++LL EM  + +  ++  +N 
Sbjct: 256 LQCATRALNELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNN 315

Query: 241 LIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--G 298
           +I    K G+  EA  +  RM   G  PDI TYN +I+  C+ GR+ EA  L    K  G
Sbjct: 316 VIDAEYKYGLVTEAAEMLRRMAEMGCGPDITTYNIMINFSCKGGRIEEADELLEKAKERG 375

Query: 299 ATPNHVTYTTLIDGYCR-----------------------------------ANDLEEAL 323
             PN  +YT L+  YC+                                   A +++ AL
Sbjct: 376 LLPNKFSYTPLMHAYCKKGDYVKASGMLFRIAEIGEKSDLVSYGAFIHGVVVAGEIDVAL 435

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
            +RE M  KGV+P    YN ++  LCK+GRI     LL+EM ++ + PD     TLI+ +
Sbjct: 436 MVREKMMEKGVFPDAQIYNILMSGLCKKGRIPAMKLLLSEMLDRNVQPDVYVFATLIDGF 495

Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY 443
            + G+   A+K+   ++  G+      Y A+I GFCK  +M  A   L  M     +P  
Sbjct: 496 IRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNEMNSVHHAPDE 555

Query: 444 CSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNL 503
            +YS ++DGY  +++  + LK+  + +      +V  Y +LI  FCKK  +  A+++F+ 
Sbjct: 556 YTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFSG 615

Query: 504 MQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
           M+   ++ + V YT+L   +++AG+P+  + I + M
Sbjct: 616 MKSFDLVPNVVTYTTLVGGFFKAGKPERATSIFELM 651



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 144/583 (24%), Positives = 259/583 (44%), Gaps = 82/583 (14%)

Query: 21  MLKGHWAKLLNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQS 80
           ++K  W K   P++         + ++++ Y  C    L CA     E  +     ++++
Sbjct: 227 LIKHRWGKCCVPHVV-------FYNMIIDGY--CKKGDLQCATRALNELKMKGVLPTVET 277

Query: 81  HWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFY 140
           +  +I+   K   F++   +L ++A R        LN  VK+ ++            +  
Sbjct: 278 YGALINGFCKAGEFEAVDQLLTEMAARG-------LNMNVKVFNN------------VID 318

Query: 141 ANLK--MTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVA 198
           A  K  +  +  ++  +M      P +    +++N   K    +   ++ +K  + G++ 
Sbjct: 319 AEYKYGLVTEAAEMLRRMAEMGCGPDITTYNIMINFSCKGGRIEEADELLEKAKERGLLP 378

Query: 199 NIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQ 258
           N   Y  L+HA CK  D  K   +L  +     ++DL +Y   I      G    AL V+
Sbjct: 379 NKFSYTPLMHAYCKKGDYVKASGMLFRIAEIGEKSDLVSYGAFIHGVVVAGEIDVALMVR 438

Query: 259 DRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRA 316
           ++M  +G+ PD   YN L+ G C++GR+   + L  ++  +   P+   + TLIDG+ R 
Sbjct: 439 EKMMEKGVFPDAQIYNILMSGLCKKGRIPAMKLLLSEMLDRNVQPDVYVFATLIDGFIRN 498

Query: 317 NDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTC 376
            +L+EA+++ +V+  KGV PG+V YN++++  CK G++ DA   LNEMN    APD  T 
Sbjct: 499 GELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNEMNSVHHAPDEYTY 558

Query: 377 NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD 436
           +T+I+ Y K  D +SA+K+  +M++     +  TY +LI+GFCK  +M  A+++  GM  
Sbjct: 559 STVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFSGMKS 618

Query: 437 AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFV-------------------------- 470
               P+  +Y+ LV G+      E    + +  +                          
Sbjct: 619 FDLVPNVVTYTTLVGGFFKAGKPERATSIFELMLMNGCLPNDATFHYLINGLTNTATSPV 678

Query: 471 ----------SRGLCVD-------------VSVYRALIRRFCKKEKVDYAQRLFNLMQGN 507
                      R L +D             ++ Y ++I   CK   VD AQ L   M   
Sbjct: 679 LIEEKDSKENERSLILDFFTMMLLDGWDQVIAAYNSVIVCLCKHGTVDTAQLLLTKMLTK 738

Query: 508 GILGDSVIYTSLAYAYWRAGEPKACSDILD-DMYRRRLMITLK 549
           G L DSV +T+L +     G+ K   +I+  D+ +  L   +K
Sbjct: 739 GFLIDSVCFTALLHGLCHKGKSKEWRNIISCDLNKIELQTAVK 781



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 143/585 (24%), Positives = 242/585 (41%), Gaps = 65/585 (11%)

Query: 25  HWAKLLNPNIASS--LTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHW 82
            W   L    A S  + S   H V+    +  H   L   FF WA +   +      +H 
Sbjct: 44  QWQDPLESRFAESKVVVSDVAHFVI----DRVHDAELGLKFFDWASTRPFSCSLDGVAHS 99

Query: 83  TMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYAN 142
           +++ +L   + F   + +LE +  +    T    +AL+                 + YA 
Sbjct: 100 SLLKLLASYRVFPEIELVLENMKAQHLKPTREAFSALI-----------------LAYAE 142

Query: 143 LKMTQDGLQVFDQMR-VHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQL----GVV 197
                  LQ+F  +R +HN  P   A  +LLN L K    D+  ++Y KM+Q     G V
Sbjct: 143 SGSLDRALQLFHTVREMHNCFPTFVASNLLLNGLVKSGKVDVALQLYDKMLQTDDGTGAV 202

Query: 198 ANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAV 257
            + +  ++++   C    +++  +L+     K     +  YN +I  YCKKG    A   
Sbjct: 203 VDNYTTSIMVKGLCNLGKIEEGRRLIKHRWGKCCVPHVVFYNMIIDGYCKKGDLQCATRA 262

Query: 258 QDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCR 315
            + ++ +G+ P + TY +LI+GFC+ G      +L  ++  +G   N   +  +ID   +
Sbjct: 263 LNELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEYK 322

Query: 316 ANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVT 375
              + EA  +   MA  G  P + TYN ++   CK GRI +A+ LL +  E+ + P+  +
Sbjct: 323 YGLVTEAAEMLRRMAEMGCGPDITTYNIMINFSCKGGRIEEADELLEKAKERGLLPNKFS 382

Query: 376 CNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGML 435
              L++AYCK GD   A  +  R+ E G   D  +Y A IHG   A E+D+A  +   M+
Sbjct: 383 YTPLMHAYCKKGDYVKASGMLFRIAEIGEKSDLVSYGAFIHGVVVAGEIDVALMVREKMM 442

Query: 436 DAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSV--------------- 480
           + G  P    Y+ L+ G C K    A+  LL E + R +  DV V               
Sbjct: 443 EKGVFPDAQIYNILMSGLCKKGRIPAMKLLLSEMLDRNVQPDVYVFATLIDGFIRNGELD 502

Query: 481 --------------------YRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLA 520
                               Y A+I+ FCK  K+  A    N M       D   Y+++ 
Sbjct: 503 EAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNEMNSVHHAPDEYTYSTVI 562

Query: 521 YAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEIL 565
             Y +  +  +   +   M + +    +  Y S    + K  +++
Sbjct: 563 DGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMI 607


>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
 gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
          Length = 1056

 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 131/438 (29%), Positives = 202/438 (46%), Gaps = 35/438 (7%)

Query: 157 RVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQL-GVVANIHLYNVLIHACCKSSD 215
           R     P++   + L+  L      +  W+VY++MV + G+  N   Y  L+   CK+ D
Sbjct: 373 RTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGD 432

Query: 216 VDKVEKLLCEMEFKD---------------------VRADLFTYNTLIALYCKKGMHYEA 254
             ++E+   +M  ++                      R  L TYNTL+    K GM  +A
Sbjct: 433 SRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDA 492

Query: 255 LAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDG 312
           L + + M   G+SPD++T+NS++ G C+E R+ +A  +F+    +G  PN VTY+TLIDG
Sbjct: 493 LGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDG 552

Query: 313 YCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPD 372
             +   ++EAL+L   M   G     VTY++++  L K GR+ DA  +L +M +    PD
Sbjct: 553 LSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPD 612

Query: 373 NVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLF 432
            VT NTLI+ + K      A+ +   MLEAG      TY  L HG C++   D A E+L 
Sbjct: 613 AVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILD 672

Query: 433 GMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVD-VSVYRALIRRFCKK 491
            M   G +P+  +YS +VDG C        L   ++     +    V  Y ALI   CK 
Sbjct: 673 YMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKA 732

Query: 492 EKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIY 551
            ++D A      M   G + D V ++ L      AG      ++   M  R     +  Y
Sbjct: 733 GRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAY 792

Query: 552 RS----------FSASYA 559
            +          FSA+YA
Sbjct: 793 NAMINAYCLKGEFSAAYA 810



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 156/570 (27%), Positives = 252/570 (44%), Gaps = 57/570 (10%)

Query: 43  IHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLE 102
           IH VLL  +  C +  +  A+F + +  +  +     ++ TM+  L K    ++A  +L+
Sbjct: 143 IHTVLL--HALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGLYKAGRLEAAGMVLQ 200

Query: 103 KIALRDFLSTPSVLNALVKIHDDPDGNSHV--LSWLVIFYANLKMTQ------------D 148
            +A  +  S+P+V    + +    DG S    L+    F+ ++  T             D
Sbjct: 201 LLA--ESFSSPTVFTFTIAV----DGLSKAGNLTGAYEFFDSMPQTGVSPNTVTYDALID 254

Query: 149 GL-------QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIH 201
           GL            +R  N    + A + LL+ L +    +   ++ K M     V N+ 
Sbjct: 255 GLCKAGKLDIALGLLRDKNSQAGMFAFSSLLHGLCQAHRLEEAIQLLKAMP---CVPNVV 311

Query: 202 LYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRM 261
            +N L++  C++  VD+  +L   M+     AD+ TYN L+   CK     EA    + M
Sbjct: 312 CFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAYRHVELM 371

Query: 262 ER-EGISPDIVTYNSLIHGFCREGRMREARRLFR---DIKGATPNHVTYTTLIDGYCRAN 317
            R EG SP++VT+++LI G C  GR+ +A  ++     ++G +PN  TY  L++G C+A 
Sbjct: 372 RRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAG 431

Query: 318 D---LE---EALRLRE---------------VMAAKGVYPGVVTYNSILRKLCKEGRIRD 356
           D   LE   E +  RE                +  +   P +VTYN+++  L K G +RD
Sbjct: 432 DSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRD 491

Query: 357 ANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIH 416
           A  LL  M E  ++PD +T N++++  CK      A  V  R LE G   +  TY  LI 
Sbjct: 492 ALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLID 551

Query: 417 GFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCV 476
           G  K  +MD A +LL  M++ G   +  +YS +VDG       E  + +L +    G   
Sbjct: 552 GLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLP 611

Query: 477 DVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDIL 536
           D   Y  LI  F K++++  A  L   M   G     V YT+L +   R+G      +IL
Sbjct: 612 DAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEIL 671

Query: 537 DDMYRRRLMITLKIYRSFSASYAKDNEILD 566
           D M  R        Y S      K   + +
Sbjct: 672 DYMAARGCAPNAITYSSIVDGLCKAGRVTE 701



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 105/366 (28%), Positives = 178/366 (48%), Gaps = 3/366 (0%)

Query: 154 DQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKS 213
           D + V    P L     L+  L+K  +      + + M++ G+  ++  +N ++   CK 
Sbjct: 462 DFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKE 521

Query: 214 SDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTY 273
             +     +      +  R ++ TY+TLI    K     EAL +  +M   G   + VTY
Sbjct: 522 QRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTY 581

Query: 274 NSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAA 331
           ++++ G  + GRM +A  + R ++  G  P+ VTY TLIDG+ +   L EA+ L   M  
Sbjct: 582 STVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLE 641

Query: 332 KGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTAS 391
            G +P VVTY ++   LC+ GR  +A  +L+ M  +  AP+ +T +++++  CK G    
Sbjct: 642 AGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTE 701

Query: 392 AMKVKNRMLEAGLMLDQ-FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLV 450
           A+    +M    ++      Y ALI G CKA  +D A E L  M+ AG  P   ++S L+
Sbjct: 702 ALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILI 761

Query: 451 DGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGIL 510
           +G C+    +  L+L      RG   D+  Y A+I  +C K +   A  L   M+ +GI 
Sbjct: 762 NGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIA 821

Query: 511 GDSVIY 516
            ++V +
Sbjct: 822 KNTVTH 827



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 115/434 (26%), Positives = 198/434 (45%), Gaps = 21/434 (4%)

Query: 73   NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHV 132
             +  S+ ++ T+ H L ++  F  A  +L+ +A R     P               N+  
Sbjct: 643  GFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARG--CAP---------------NAIT 685

Query: 133  LSWLVIFYANLKMTQDGLQVFDQM-RVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKM 191
             S +V          + L  F++M R   + PH+ A + L++ L K    D  ++  ++M
Sbjct: 686  YSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERM 745

Query: 192  VQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMH 251
            ++ G + ++  +++LI+  C +  +D   +L C M  +  +AD++ YN +I  YC KG  
Sbjct: 746  IRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEF 805

Query: 252  YEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLID 311
              A A+ + M+  GI+ + VT+  +I   C   R+ EA   F  I     + ++Y TLI 
Sbjct: 806  SAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPEDCRDEISYNTLIT 865

Query: 312  GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAP 371
                +   E+AL L   M A G  P    Y +++  L K G    A +LL EM  +  +P
Sbjct: 866  SLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSP 925

Query: 372  DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
            D  T   +I+   K      A      ML   L  D   Y +LI  FCKA ++D A +LL
Sbjct: 926  DLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVDDAWKLL 985

Query: 432  FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
                 +G  P+   YS +VD  C     +  L+++ E  S+     + ++ +L   +  +
Sbjct: 986  ---RSSGIEPTITMYSTMVDSLCKNRGTDKALEVIREMKSKNCEPGIHIWTSLATAYVAE 1042

Query: 492  EKVDYAQRLFNLMQ 505
             +VD A +L N +Q
Sbjct: 1043 GRVDEAVKLVNDLQ 1056



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 141/542 (26%), Positives = 227/542 (41%), Gaps = 103/542 (19%)

Query: 75  KHSLQSHWTMIHILTKNKHFKSA----QNMLEKIALRDFLSTPSVLNALVKIHDDPDGNS 130
           + +L ++ T++  L+K+   + A    + M+E     D ++  SVL+ L K         
Sbjct: 470 RPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCK-------EQ 522

Query: 131 HVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKK 190
            +L              D   VF +       P++   + L++ L+K    D   ++  K
Sbjct: 523 RIL--------------DAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAK 568

Query: 191 MVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGM 250
           MV+LG  AN   Y+ ++    K   ++    +L +M       D  TYNTLI  + K+  
Sbjct: 569 MVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQR 628

Query: 251 HYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRL--FRDIKGATPNHVTYTT 308
             EA+ +   M   G  P +VTY +L HG CR GR  EA  +  +   +G  PN +TY++
Sbjct: 629 LREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSS 688

Query: 309 LIDGYCRANDLEEALRLREVMAA-KGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEK 367
           ++DG C+A  + EAL   E MA  + V P V+ Y++++  LCK GRI +A   L  M   
Sbjct: 689 IVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRA 748

Query: 368 KIAPDNVT----------------------------C-------NTLINAYCKIGDTASA 392
              PD VT                            C       N +INAYC  G+ ++A
Sbjct: 749 GRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAA 808

Query: 393 MKVKNRMLEAGLM---------------------------------LDQFTYKALIHGFC 419
             +   M   G+                                   D+ +Y  LI    
Sbjct: 809 YALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPEDCRDEISYNTLITSLV 868

Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
            ++  + A ELL  M+  G SP  C+Y  ++DG     + E   KLL E  SRG   D+ 
Sbjct: 869 ASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLR 928

Query: 480 VYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
            Y  +I    K +++  A   F  M    +  D+++Y+SL  A+ +A       D +DD 
Sbjct: 929 TYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKA-------DKVDDA 981

Query: 540 YR 541
           ++
Sbjct: 982 WK 983



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/354 (29%), Positives = 176/354 (49%), Gaps = 12/354 (3%)

Query: 170 VLLNSLAK-DRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEF 228
           VL+N L K  R+ D  +  ++K +Q G    +  Y+ +I   C+ ++VDK  KLL EM  
Sbjct: 6   VLINGLCKAGRVCD-AFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEMAG 64

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
           +    +  TYNTL+     +G   EA ++ +RM   G  P+++T+  +I G C+EG +  
Sbjct: 65  RGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEIEA 124

Query: 289 ARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILR 346
           A R+  ++  +G  P+   +T L+   C    ++EA    + +   G  P  VTYN+++ 
Sbjct: 125 AFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVD 184

Query: 347 KLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLML 406
            L K GR+  A  +L  + E   +P   T    ++   K G+   A +  + M + G+  
Sbjct: 185 GLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSP 244

Query: 407 DQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLL 466
           +  TY ALI G CKA ++DIA  LL    D        ++S L+ G C  +  E  ++LL
Sbjct: 245 NTVTYDALIDGLCKAGKLDIALGLL---RDKNSQAGMFAFSSLLHGLCQAHRLEEAIQLL 301

Query: 467 DEFVSRGLCV-DVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
                   CV +V  + +L+   C+  +VD A  LF++M+ +G   D + Y  L
Sbjct: 302 KAMP----CVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNIL 351



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 103/384 (26%), Positives = 174/384 (45%), Gaps = 11/384 (2%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D    F +       P +   + +++ L +D   D   K+ ++M   G   N   YN L+
Sbjct: 19  DAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEMAGRGCAPNAVTYNTLV 78

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           +A        +   LL  M       +L T+  +I   CK+G    A  V D M   G  
Sbjct: 79  NALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMVDRGFV 138

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
           PD+  +  L+H  C  GR+ EA   F+ +   G TP+ VTY T++DG  +A  LE A  +
Sbjct: 139 PDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGLYKAGRLEAAGMV 198

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
            +++A     P V T+   +  L K G +  A    + M +  ++P+ VT + LI+  CK
Sbjct: 199 LQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPNTVTYDALIDGLCK 258

Query: 386 IGDTASAMK-VKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
            G    A+  ++++  +AG+    F + +L+HG C+A  ++ A +LL  M      P+  
Sbjct: 259 AGKLDIALGLLRDKNSQAGM----FAFSSLLHGLCQAHRLEEAIQLLKAM---PCVPNVV 311

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
            ++ L++G C     +   +L D     G   DV  Y  L++  CK  ++  A R   LM
Sbjct: 312 CFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAYRHVELM 371

Query: 505 -QGNGILGDSVIYTSLAYAYWRAG 527
            +  G   + V +++L      AG
Sbjct: 372 RRTEGCSPNVVTFSTLIQGLCNAG 395



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 127/565 (22%), Positives = 226/565 (40%), Gaps = 108/565 (19%)

Query: 44  HKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEK 103
           + VL+N    C    +  AF  + ++    ++ ++ ++ T+I  L ++        +LE+
Sbjct: 4   YNVLIN--GLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEE 61

Query: 104 IALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMP 163
           +A R         N LV                          ++   + ++M  +   P
Sbjct: 62  MAGRGCAPNAVTYNTLVNA-----------------LLGQGRAKEAFSLLERMAANGCPP 104

Query: 164 HLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLL 223
            L    +++  L K+   +  ++V  +MV  G V ++ ++ VL+HA C+   VD+     
Sbjct: 105 ELITFGLIIKGLCKEGEIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFF 164

Query: 224 CEMEFKDVRADLFTYNTLI-ALYCKKGMHYEALAVQ------------------------ 258
            ++       D  TYNT++  LY    +    + +Q                        
Sbjct: 165 QQVLLIGFTPDAVTYNTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKA 224

Query: 259 ----------DRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKG---------- 298
                     D M + G+SP+ VTY++LI G C+ G++  A  L RD             
Sbjct: 225 GNLTGAYEFFDSMPQTGVSPNTVTYDALIDGLCKAGKLDIALGLLRDKNSQAGMFAFSSL 284

Query: 299 ---------------------ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPG 337
                                  PN V + +L++G C+A  ++EA  L +VM   G    
Sbjct: 285 LHGLCQAHRLEEAIQLLKAMPCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSAD 344

Query: 338 VVTYNSILRKLCKEGRIRDANRLLNEMNEKK-IAPDNVTCNTLINAYCKIGDTASAMKVK 396
           V+TYN +L+ LCK  RI +A R +  M   +  +P+ VT +TLI   C  G    A +V 
Sbjct: 345 VITYNILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVY 404

Query: 397 NRMLEA-GLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGF---------------- 439
            RM+   G+  ++FTY  L+ G CKA +    ++    ML+  +                
Sbjct: 405 ERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFL 464

Query: 440 -----SPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKV 494
                 P+  +Y+ LV G          L LL+  +  GL  DV  + +++   CK++++
Sbjct: 465 MVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRI 524

Query: 495 DYAQRLFNLMQGNGILGDSVIYTSL 519
             A  +F      G   + V Y++L
Sbjct: 525 LDAHNVFKRALERGCRPNVVTYSTL 549



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 83/269 (30%), Positives = 133/269 (49%), Gaps = 2/269 (0%)

Query: 235 LFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR 294
           + TYN LI   CK G   +A     +  + G  P +VTY+++I G CR+  + +  +L  
Sbjct: 1   MVTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLE 60

Query: 295 DI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEG 352
           ++  +G  PN VTY TL++        +EA  L E MAA G  P ++T+  I++ LCKEG
Sbjct: 61  EMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEG 120

Query: 353 RIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYK 412
            I  A R+++EM ++   PD      L++A C++G    A     ++L  G   D  TY 
Sbjct: 121 EIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYN 180

Query: 413 ALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSR 472
            ++ G  KA  ++ A  +L  + ++  SP+  +++  VDG     N     +  D     
Sbjct: 181 TMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQT 240

Query: 473 GLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
           G+  +   Y ALI   CK  K+D A  L 
Sbjct: 241 GVSPNTVTYDALIDGLCKAGKLDIALGLL 269



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/263 (26%), Positives = 112/263 (42%), Gaps = 41/263 (15%)

Query: 304 VTYTTL-----------------------------------IDGYCRANDLEEALRLREV 328
           VTY  L                                   IDG CR N++++  +L E 
Sbjct: 2   VTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEE 61

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           MA +G  P  VTYN+++  L  +GR ++A  LL  M      P+ +T   +I   CK G+
Sbjct: 62  MAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGE 121

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
             +A +V + M++ G + D   +  L+H  C+   +D A      +L  GF+P   +Y+ 
Sbjct: 122 IEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNT 181

Query: 449 LVDGYCNKNNEEA---LLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           +VDG       EA   +L+LL E  S      V  +   +    K   +  A   F+ M 
Sbjct: 182 MVDGLYKAGRLEAAGMVLQLLAESFSS---PTVFTFTIAVDGLSKAGNLTGAYEFFDSMP 238

Query: 506 GNGILGDSVIYTSLAYAYWRAGE 528
             G+  ++V Y +L     +AG+
Sbjct: 239 QTGVSPNTVTYDALIDGLCKAGK 261



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 90/199 (45%)

Query: 338 VVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKN 397
           +VTYN ++  LCK GR+ DA     +  +    P  VT +T+I+  C+  +     K+  
Sbjct: 1   MVTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLE 60

Query: 398 RMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKN 457
            M   G   +  TY  L++          A  LL  M   G  P   ++  ++ G C + 
Sbjct: 61  EMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEG 120

Query: 458 NEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYT 517
             EA  +++DE V RG   DV ++  L+   C+  +VD A   F  +   G   D+V Y 
Sbjct: 121 EIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYN 180

Query: 518 SLAYAYWRAGEPKACSDIL 536
           ++    ++AG  +A   +L
Sbjct: 181 TMVDGLYKAGRLEAAGMVL 199



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 64/142 (45%)

Query: 410 TYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEF 469
           TY  LI+G CKA  +  A       +  GF P+  +YS ++DG C  N  +   KLL+E 
Sbjct: 3   TYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEM 62

Query: 470 VSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEP 529
             RG   +   Y  L+     + +   A  L   M  NG   + + +  +     + GE 
Sbjct: 63  AGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEI 122

Query: 530 KACSDILDDMYRRRLMITLKIY 551
           +A   ++D+M  R  +  ++I+
Sbjct: 123 EAAFRVVDEMVDRGFVPDVEIH 144


>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 577

 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 119/433 (27%), Positives = 213/433 (49%), Gaps = 4/433 (0%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           S  N ++ +H  P       + L+I    +K     L +  QM    + P+++   +L+N
Sbjct: 45  SSFNRMLHMHPPPSIAD--FTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILIN 102

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
           S    +     + V  K+++LG   NI  +N LI   C    + +V  L  +M  +  + 
Sbjct: 103 SFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQP 162

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           ++ TY TLI   CK G    A+ +   ME+    PD+V Y S+I   C++ ++ +A  LF
Sbjct: 163 NVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLF 222

Query: 294 RDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
            ++  +G +P+  TY +LI   C   + +    L   M    + P VV +++++  LCKE
Sbjct: 223 SEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKE 282

Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
           G++ +A+ +++ M ++ + P+ VT N L++ +C   +   A+KV + M+  G   D  +Y
Sbjct: 283 GKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSY 342

Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
             LI+G+CK + ++ A  L   M      P+  +YS L+ G C+    +  + L  E V+
Sbjct: 343 STLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVT 402

Query: 472 RGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKA 531
           RG   D   Y  L+   CK  ++D A  L   ++G+ +  D  IYT +     RAGE +A
Sbjct: 403 RGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEA 462

Query: 532 CSDILDDMYRRRL 544
             D+  ++  + L
Sbjct: 463 ARDLFSNLSSKGL 475



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 138/545 (25%), Positives = 249/545 (45%), Gaps = 37/545 (6%)

Query: 9   SDTKFIKTISAIMLKGHWAKLLNPNIASSLTSTAIHK------VLLNLYNCCHIPSLSCA 62
           S   F K + +I    H++ +L+  ++  + S  I        +L+N +  CH+  L  A
Sbjct: 58  SIADFTKLLISITKMKHYSTVLS--LSHQMDSFGIPPNIYTLNILINSF--CHLQRLGFA 113

Query: 63  FFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDF----LSTPSVLNA 118
           F   A+     ++ ++ +  T+I  L          ++ +K+    F    ++  +++N 
Sbjct: 114 FSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLING 173

Query: 119 LVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKD 178
           L K+                       T   +++   M   N  P +   T +++SL KD
Sbjct: 174 LCKVGS---------------------TSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKD 212

Query: 179 RLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTY 238
           R     + ++ +M+  G+  +I  YN LIHA C   +   V  LL EM    +  ++  +
Sbjct: 213 RQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIF 272

Query: 239 NTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI-- 296
           +T++   CK+G   EA  V D M + G+ P++VTYN+L+ G C    M EA ++F  +  
Sbjct: 273 STVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVC 332

Query: 297 KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRD 356
           KG  P+ V+Y+TLI+GYC+   +E+A+ L E M  K + P  VTY++++  LC  GR++D
Sbjct: 333 KGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQD 392

Query: 357 ANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIH 416
           A  L +EM  +   PD V+   L++  CK      A+ +   +  + +  D   Y  +I 
Sbjct: 393 AIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVID 452

Query: 417 GFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCV 476
           G C+A E++ A++L   +   G  P+  +Y+ +++G C +       KL  E   +G   
Sbjct: 453 GMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSP 512

Query: 477 DVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDIL 536
           +   Y  + R F +  +     +L   M   G   D    T L       G  ++   IL
Sbjct: 513 NGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVKQIL 572

Query: 537 DDMYR 541
            +  +
Sbjct: 573 SEFLQ 577



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 117/438 (26%), Positives = 208/438 (47%), Gaps = 14/438 (3%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           L +FD+M      P++     L+N L K   T    ++ + M Q     ++ +Y  +I +
Sbjct: 149 LHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDS 208

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
            CK   V +   L  EM  + +   +FTYN+LI   C         A+ + M    I P+
Sbjct: 209 LCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPN 268

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLRE 327
           +V +++++   C+EG++ EA  +   +  +G  PN VTY  L+DG+C  ++++EA+++ +
Sbjct: 269 VVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFD 328

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
            M  KG  P VV+Y++++   CK  RI  A  L  EM  K++ P+ VT +TL++  C +G
Sbjct: 329 TMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVG 388

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
               A+ + + M+  G + D  +Y  L+   CK + +D A  LL  +  +   P    Y+
Sbjct: 389 RLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYT 448

Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGN 507
            ++DG C     EA   L     S+GL  +V  Y  +I   C++  +  A +LF  M+  
Sbjct: 449 IVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRK 508

Query: 508 GILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDL 567
           G   +   Y  +   + R  E      +L +M          + R FSA  +    ++++
Sbjct: 509 GYSPNGCTYNLITRGFLRNNETLRGIQLLQEM----------LARGFSADVSTSTVLVEM 558

Query: 568 FWSHVVDRGLMSKHIFKE 585
                +D+ +  K I  E
Sbjct: 559 LSDDGLDQSV--KQILSE 574



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 92/307 (29%), Positives = 146/307 (47%), Gaps = 3/307 (0%)

Query: 251 HYEA-LAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYT 307
           HY   L++  +M+  GI P+I T N LI+ FC   R+  A  +   I   G  PN  T+ 
Sbjct: 74  HYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFN 133

Query: 308 TLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEK 367
           TLI G C    + E L L + M  +G  P VVTY +++  LCK G    A RLL  M + 
Sbjct: 134 TLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQG 193

Query: 368 KIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIA 427
              PD V   ++I++ CK      A  + + M+  G+    FTY +LIH  C   E    
Sbjct: 194 NCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHV 253

Query: 428 KELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRR 487
             LL  M+++   P+   +S +VD  C +        ++D  + RG+  +V  Y AL+  
Sbjct: 254 TALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDG 313

Query: 488 FCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMIT 547
            C + ++D A ++F+ M   G   D V Y++L   Y +    +    + ++M R+ L+  
Sbjct: 314 HCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPN 373

Query: 548 LKIYRSF 554
              Y + 
Sbjct: 374 TVTYSTL 380



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 81/314 (25%), Positives = 140/314 (44%), Gaps = 2/314 (0%)

Query: 253 EALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR--DIKGATPNHVTYTTLI 310
           +AL+  +RM      P I  +  L+    +         L    D  G  PN  T   LI
Sbjct: 42  DALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILI 101

Query: 311 DGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIA 370
           + +C    L  A  +   +   G  P + T+N+++R LC EG+I +   L ++M  +   
Sbjct: 102 NSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQ 161

Query: 371 PDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL 430
           P+ VT  TLIN  CK+G T++A+++   M +     D   Y ++I   CK +++  A  L
Sbjct: 162 PNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNL 221

Query: 431 LFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCK 490
              M+  G SPS  +Y+ L+   CN    + +  LL+E V+  +  +V ++  ++   CK
Sbjct: 222 FSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCK 281

Query: 491 KEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKI 550
           + KV  A  + ++M   G+  + V Y +L   +    E      + D M  +     +  
Sbjct: 282 EGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVS 341

Query: 551 YRSFSASYAKDNEI 564
           Y +    Y K   I
Sbjct: 342 YSTLINGYCKIQRI 355



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 64/250 (25%), Positives = 112/250 (44%)

Query: 317 NDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTC 376
           N L++AL     M      P +  +  +L  + K         L ++M+   I P+  T 
Sbjct: 38  NTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTL 97

Query: 377 NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD 436
           N LIN++C +     A  V  ++L+ G   +  T+  LI G C   ++     L   M+ 
Sbjct: 98  NILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIG 157

Query: 437 AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDY 496
            GF P+  +Y  L++G C   +  A ++LL          DV VY ++I   CK  +V  
Sbjct: 158 EGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQ 217

Query: 497 AQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSA 556
           A  LF+ M   GI      Y SL +A     E K  + +L++M   ++M  + I+ +   
Sbjct: 218 AFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVD 277

Query: 557 SYAKDNEILD 566
           +  K+ ++++
Sbjct: 278 ALCKEGKVME 287



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 50/233 (21%), Positives = 95/233 (40%), Gaps = 5/233 (2%)

Query: 340 TYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRM 399
           ++N+   K      + DA    N M      P       L+ +  K+   ++ + + ++M
Sbjct: 26  SHNTFHSKSLNFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQM 85

Query: 400 LEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNE 459
              G+  + +T   LI+ FC  + +  A  +L  +L  G  P+  +++ L+ G C +   
Sbjct: 86  DSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKI 145

Query: 460 EALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
             +L L D+ +  G   +V  Y  LI   CK      A RL   M+      D V+YTS+
Sbjct: 146 GEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSI 205

Query: 520 AYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHV 572
             +  +  +     ++  +M  + +  ++  Y S   +     E     W HV
Sbjct: 206 IDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCE-----WKHV 253


>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
 gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
          Length = 814

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 118/402 (29%), Positives = 196/402 (48%), Gaps = 37/402 (9%)

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
           P + A   +++   K+   +    ++K+MVQ G+  +   Y+ ++HA CK+  +DK E  
Sbjct: 217 PDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAF 276

Query: 223 LCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR 282
           L +M  K V  + +TYN LI  Y   G   EA+ V   M R+ I PD+VT+N L+   C+
Sbjct: 277 LRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCK 336

Query: 283 EGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVT 340
            G+++EAR +F  +  KG  P+  +Y  +++GY     L +   L ++M   G+ P + T
Sbjct: 337 YGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICT 396

Query: 341 YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML 400
           +N +++     G +  A  + NEM +  + P+ +T  T+I A C+IG    AM+  N+M+
Sbjct: 397 FNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMI 456

Query: 401 EAGLMLDQFTYKALIHGFCKAKEMDIAKELLF-----GM--------------------- 434
           + G+  D++ Y  LI GFC    +  AKEL+      GM                     
Sbjct: 457 DQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVM 516

Query: 435 ---------LDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
                    ++ G  P+   YS L+DGYC     E  L++ D  VS G+  +  VY  L+
Sbjct: 517 DAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLV 576

Query: 486 RRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
             +CK  ++D    LF  M   GI   +++Y  +    + AG
Sbjct: 577 NGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAG 618



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 120/429 (27%), Positives = 207/429 (48%), Gaps = 16/429 (3%)

Query: 162 MPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVV--ANIHLYNVLIHACCKSSDVDKV 219
           +P + + ++LL SL     +     + + M + G V   ++  YN +I    K  DV+K 
Sbjct: 179 VPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKA 238

Query: 220 EKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHG 279
             L  EM  + +  D  TY++++   CK     +A A   +M  +G+ P+  TYN+LI+G
Sbjct: 239 CDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYG 298

Query: 280 FCREGRMREARRLFRDIKGAT--PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPG 337
           +   G+ +EA R+F++++  +  P+ VT+  L+   C+   ++EA  + + MA KG  P 
Sbjct: 299 YSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPD 358

Query: 338 VVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKN 397
           V +YN +L     +G + D   L + M    IAP   T N LI AY   G    AM + N
Sbjct: 359 VFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFN 418

Query: 398 RMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKN 457
            M + G+  +  TY  +I   C+  +MD A E    M+D G +P   +Y  L+ G+C   
Sbjct: 419 EMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHG 478

Query: 458 NEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYT 517
           +     +L+ E ++ G+ +D+ ++ ++I   CK  +V  AQ +F+L    G+   +V+Y+
Sbjct: 479 SLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYS 538

Query: 518 SLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGL 577
            L   Y   G+ +    + D M    +     +Y +    Y K   I         D GL
Sbjct: 539 MLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRI---------DEGL 589

Query: 578 MSKHIFKEM 586
               +F+EM
Sbjct: 590 ---SLFREM 595



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 119/499 (23%), Positives = 221/499 (44%), Gaps = 19/499 (3%)

Query: 91  NKHFKSAQNMLEKIALRDFLSTPSVLNALVKIH--DDPDG------NSHVL--SW----L 136
           NK     + M+++    DF++  SV++AL K    D  +       N  VL  +W    L
Sbjct: 236 NKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNL 295

Query: 137 VIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGV 196
           +  Y++    ++ ++VF +MR  +++P +    +L+ SL K         V+  M   G 
Sbjct: 296 IYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQ 355

Query: 197 VANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALA 256
             ++  YN++++       +  +  L   M    +   + T+N LI  Y   GM  +A+ 
Sbjct: 356 NPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMI 415

Query: 257 VQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYC 314
           + + M   G+ P+++TY ++I   CR G+M +A   F  +  +G  P+   Y  LI G+C
Sbjct: 416 IFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFC 475

Query: 315 RANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNV 374
               L +A  L   +   G++  +V ++SI+  LCK GR+ DA  + +      + P  V
Sbjct: 476 THGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAV 535

Query: 375 TCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGM 434
             + L++ YC +G    A++V + M+ AG+  +   Y  L++G+CK   +D    L   M
Sbjct: 536 VYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREM 595

Query: 435 LDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKV 494
           L  G  PS   Y+ ++DG               E    G+ ++   Y  ++R   K    
Sbjct: 596 LQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCF 655

Query: 495 DYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSF 554
           D A  LF  ++   +  D +   ++    ++    +   D+   + R  L+  +  Y   
Sbjct: 656 DEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIM 715

Query: 555 SASYAKDN---EILDLFWS 570
             +  K+    E  D+F S
Sbjct: 716 ITNLIKEGLVEEAEDMFSS 734



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 114/449 (25%), Positives = 212/449 (47%), Gaps = 11/449 (2%)

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLA-KDRLTDMVWKVYKKMVQLGVVA 198
           Y  +K  +D   VFD M +    P + +  ++LN  A K  L DM   ++  M+  G+  
Sbjct: 337 YGKIKEARD---VFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMT-DLFDLMLGDGIAP 392

Query: 199 NIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQ 258
            I  +NVLI A      +DK   +  EM    V+ ++ TY T+IA  C+ G   +A+   
Sbjct: 393 VICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKF 452

Query: 259 DRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRA 316
           ++M  +G++PD   Y+ LI GFC  G + +A+ L  +I   G   + V ++++I+  C+ 
Sbjct: 453 NQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKL 512

Query: 317 NDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTC 376
             + +A  + ++    G++P  V Y+ ++   C  G++  A R+ + M    I P++V  
Sbjct: 513 GRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVY 572

Query: 377 NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD 436
            TL+N YCKIG     + +   ML+ G+      Y  +I G  +A     AK     M +
Sbjct: 573 GTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTE 632

Query: 437 AGFSPSYCSYSWLVDG-YCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVD 495
           +G + + C+YS ++ G + N+  +EA+  L  E  +  + +D+     +I    +  +V+
Sbjct: 633 SGIAMNKCTYSIVLRGLFKNRCFDEAIF-LFKELRAMNVKIDIITLNTMIAGMFQTRRVE 691

Query: 496 YAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFS 555
            A+ LF  +  +G++   V Y+ +     + G  +   D+   M         ++     
Sbjct: 692 EAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVV 751

Query: 556 ASYAKDNEIL--DLFWSHVVDRGLMSKHI 582
               K NEI+    + S + +R    +H+
Sbjct: 752 RELLKKNEIVRAGAYLSKIDERNFSLEHL 780



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 94/373 (25%), Positives = 175/373 (46%), Gaps = 5/373 (1%)

Query: 127 DGNSHVL---SWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDM 183
           DG + V+   + L+  YAN  M    + +F++MR H + P++   T ++ +L +    D 
Sbjct: 388 DGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDD 447

Query: 184 VWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIA 243
             + + +M+  GV  + + Y+ LI   C    + K ++L+ E+    +  D+  ++++I 
Sbjct: 448 AMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIIN 507

Query: 244 LYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATP 301
             CK G   +A  + D     G+ P  V Y+ L+ G+C  G+M +A R+F  +   G  P
Sbjct: 508 NLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEP 567

Query: 302 NHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLL 361
           N V Y TL++GYC+   ++E L L   M  KG+ P  + YN I+  L + GR   A    
Sbjct: 568 NDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKF 627

Query: 362 NEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKA 421
           +EM E  IA +  T + ++    K      A+ +   +    + +D  T   +I G  + 
Sbjct: 628 HEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQT 687

Query: 422 KEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVY 481
           + ++ AK+L   +  +G  P   +YS ++     +   E    +     + G   D  + 
Sbjct: 688 RRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLL 747

Query: 482 RALIRRFCKKEKV 494
             ++R   KK ++
Sbjct: 748 NHVVRELLKKNEI 760



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 83/315 (26%), Positives = 142/315 (45%), Gaps = 40/315 (12%)

Query: 254 ALAVQDRMEREGISPDIVTYNSLIHGFCR------------------------------- 282
           ALA   ++ R G+  DI+  N L+ GFC                                
Sbjct: 130 ALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILL 189

Query: 283 -----EGRMREARRLFRDIK--GA--TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKG 333
                +G+  +A  L R +   GA  +P+ V Y T+IDG+ +  D+ +A  L + M  +G
Sbjct: 190 KSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRG 249

Query: 334 VYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAM 393
           + P  VTY+S++  LCK   +  A   L +M  K + P+N T N LI  Y   G    A+
Sbjct: 250 IPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAV 309

Query: 394 KVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGY 453
           +V   M    ++ D  T+  L+   CK  ++  A+++   M   G +P   SY+ +++GY
Sbjct: 310 RVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGY 369

Query: 454 CNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDS 513
             K     +  L D  +  G+   +  +  LI+ +     +D A  +FN M+ +G+  + 
Sbjct: 370 ATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNV 429

Query: 514 VIYTSLAYAYWRAGE 528
           + YT++  A  R G+
Sbjct: 430 LTYTTVIAALCRIGK 444



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 73/278 (26%), Positives = 119/278 (42%), Gaps = 38/278 (13%)

Query: 300 TPNHVTYTTLID-----------------------------------GYCRANDLEEALR 324
           +P   TY  L+D                                   G+C A   +EAL 
Sbjct: 108 SPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALD 167

Query: 325 -LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI--APDNVTCNTLIN 381
            L       G  P V +Y+ +L+ LC +G+   A+ LL  M E     +PD V  NT+I+
Sbjct: 168 ILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVID 227

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
            + K GD   A  +   M++ G+  D  TY +++H  CKA+ MD A+  L  M++ G  P
Sbjct: 228 GFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLP 287

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
           +  +Y+ L+ GY +    +  +++  E   + +  DV  +  L+   CK  K+  A+ +F
Sbjct: 288 NNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVF 347

Query: 502 NLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
           + M   G   D   Y  +   Y   G     +D+ D M
Sbjct: 348 DTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLM 385



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 66/278 (23%), Positives = 118/278 (42%), Gaps = 2/278 (0%)

Query: 143 LKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHL 202
           L    D   +FD      L P     ++L++        +   +V+  MV  G+  N  +
Sbjct: 512 LGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVV 571

Query: 203 YNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRME 262
           Y  L++  CK   +D+   L  EM  K ++     YN +I    + G    A      M 
Sbjct: 572 YGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMT 631

Query: 263 REGISPDIVTYNSLIHGFCREGRMREARRLFRDIKG--ATPNHVTYTTLIDGYCRANDLE 320
             GI+ +  TY+ ++ G  +     EA  LF++++      + +T  T+I G  +   +E
Sbjct: 632 ESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVE 691

Query: 321 EALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLI 380
           EA  L   ++  G+ P VVTY+ ++  L KEG + +A  + + M      PD+   N ++
Sbjct: 692 EAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVV 751

Query: 381 NAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGF 418
               K  +   A    +++ E    L+  T   L+  F
Sbjct: 752 RELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLF 789



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 63/258 (24%), Positives = 118/258 (45%), Gaps = 2/258 (0%)

Query: 132 VLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKM 191
           V S L+  Y  +   +  L+VFD M    + P+      L+N   K    D    ++++M
Sbjct: 536 VYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREM 595

Query: 192 VQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMH 251
           +Q G+  +  LYN++I    ++      +    EM    +  +  TY+ ++    K    
Sbjct: 596 LQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCF 655

Query: 252 YEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTL 309
            EA+ +   +    +  DI+T N++I G  +  R+ EA+ LF  I   G  P  VTY+ +
Sbjct: 656 DEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIM 715

Query: 310 IDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI 369
           I    +   +EEA  +   M   G  P     N ++R+L K+  I  A   L++++E+  
Sbjct: 716 ITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNF 775

Query: 370 APDNVTCNTLINAYCKIG 387
           + +++T   L++ +   G
Sbjct: 776 SLEHLTTMLLVDLFSSKG 793



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/218 (22%), Positives = 84/218 (38%), Gaps = 41/218 (18%)

Query: 392 AMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLF------------------- 432
           A+    ++L  GL +D      L+ GFC+AK  D A ++L                    
Sbjct: 130 ALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILL 189

Query: 433 -GMLDAG------------------FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
             + D G                   SP   +Y+ ++DG+  + +      L  E V RG
Sbjct: 190 KSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRG 249

Query: 474 LCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACS 533
           +  D   Y +++   CK   +D A+     M   G+L ++  Y +L Y Y   G+ K   
Sbjct: 250 IPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAV 309

Query: 534 DILDDMYRRRLM---ITLKIYRSFSASYAKDNEILDLF 568
            +  +M R+ ++   +T  +       Y K  E  D+F
Sbjct: 310 RVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVF 347


>gi|356557251|ref|XP_003546931.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Glycine max]
          Length = 808

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 128/489 (26%), Positives = 226/489 (46%), Gaps = 55/489 (11%)

Query: 106 LRDFLSTPSVLNALVKIH---------------DDPDG---NSHVLSWLVIFYANLKMTQ 147
           L   +++ S+LN LVK                 DD  G   +++  S +V    NL   +
Sbjct: 159 LPTVVASNSLLNGLVKSGKVDVALQLYDKMLQTDDGTGAVVDNYTTSIVVKGLCNLGKIE 218

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           +G ++         +PH+    ++++   K        +  K++   GV+  +  Y  LI
Sbjct: 219 EGRRLVKDRWGKGCVPHVVFYNMIIDGYCKKGDLQCATRTLKELKMKGVLPTVETYGALI 278

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           +  CK+ + + V++LL EM  + +  ++  +N +I    K G+  +A     RM   G  
Sbjct: 279 NGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEFKYGLVTKAAETMRRMAEMGCG 338

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRAND------- 318
           PDI TYN++I+  C+ GR++EA       K  G  PN  +YT L+  YC+  D       
Sbjct: 339 PDITTYNTMINFSCKGGRIKEADEFLEKAKERGLLPNKFSYTPLMHAYCKQGDYVKAAGM 398

Query: 319 ----------------------------LEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
                                       ++ AL +RE M  KGV+P    YN ++  LCK
Sbjct: 399 LFRIAEIGEKPDLVSYGAFIHGVVVHGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCK 458

Query: 351 EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
            GR      LL+EM ++ + PD     TL++ + + G+   A+K+   ++  G+      
Sbjct: 459 NGRFPAMKLLLSEMLDRNVQPDVYVFATLMDGFIRNGELDEAIKIFKVIIRKGVDPGIVG 518

Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFV 470
           Y A+I GFCK  +M  A   L  M +   +P   +YS ++DGY  +++  + LK+  + +
Sbjct: 519 YNAMIKGFCKFGKMTDALSCLNKMKNVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMM 578

Query: 471 SRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPK 530
                 +V  Y +LI  FCKK  +  A+++F  M+   ++ + V YT+L   +++AG+P+
Sbjct: 579 KHKFKPNVITYTSLINGFCKKADMIRAEKVFRGMKSFDLVPNVVTYTTLVGGFFKAGKPE 638

Query: 531 ACSDILDDM 539
             + I + M
Sbjct: 639 KATSIFELM 647



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 144/583 (24%), Positives = 252/583 (43%), Gaps = 82/583 (14%)

Query: 21  MLKGHWAKLLNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQS 80
           ++K  W K   P++         + ++++ Y  C    L CA     E  +     ++++
Sbjct: 223 LVKDRWGKGCVPHVV-------FYNMIIDGY--CKKGDLQCATRTLKELKMKGVLPTVET 273

Query: 81  HWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFY 140
           +  +I+   K   F++   +L ++A R        LN  VK+ ++            +  
Sbjct: 274 YGALINGFCKAGEFEAVDQLLTEMAARG-------LNMNVKVFNN------------VID 314

Query: 141 ANLK--MTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVA 198
           A  K  +     +   +M      P +     ++N   K        +  +K  + G++ 
Sbjct: 315 AEFKYGLVTKAAETMRRMAEMGCGPDITTYNTMINFSCKGGRIKEADEFLEKAKERGLLP 374

Query: 199 NIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQ 258
           N   Y  L+HA CK  D  K   +L  +     + DL +Y   I      G    AL V+
Sbjct: 375 NKFSYTPLMHAYCKQGDYVKAAGMLFRIAEIGEKPDLVSYGAFIHGVVVHGEIDVALMVR 434

Query: 259 DRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRA 316
           ++M  +G+ PD   YN L+ G C+ GR    + L  ++  +   P+   + TL+DG+ R 
Sbjct: 435 EKMMEKGVFPDAQIYNVLMSGLCKNGRFPAMKLLLSEMLDRNVQPDVYVFATLMDGFIRN 494

Query: 317 NDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTC 376
            +L+EA+++ +V+  KGV PG+V YN++++  CK G++ DA   LN+M     APD  T 
Sbjct: 495 GELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNKMKNVHHAPDEYTY 554

Query: 377 NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD 436
           +T+I+ Y K  D +SA+K+  +M++     +  TY +LI+GFCK  +M  A+++  GM  
Sbjct: 555 STVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFRGMKS 614

Query: 437 AGFSPSYCSYSWLVDGY--------------------CNKN------------------- 457
               P+  +Y+ LV G+                    C  N                   
Sbjct: 615 FDLVPNVVTYTTLVGGFFKAGKPEKATSIFELMLMNGCPPNDATFHYLINGLTNTATSPV 674

Query: 458 ---------NEEAL-LKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGN 507
                    NE +L L      +S G    ++ Y ++I   CK   VD AQ L   M   
Sbjct: 675 LIEEKDSMENERSLILDFFTMMLSEGWDQVIAAYNSVIVCLCKHGMVDTAQLLLTKMLTK 734

Query: 508 GILGDSVIYTSLAYAYWRAGEPKACSDILD-DMYRRRLMITLK 549
           G L DSV +T++ +     G+ K   +I+  D+ +  L   +K
Sbjct: 735 GFLIDSVCFTAMLHGLCHKGKSKEWRNIISCDLNKIELQTAVK 777



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 141/604 (23%), Positives = 250/604 (41%), Gaps = 69/604 (11%)

Query: 21  MLKGH-WAKLLNPNIASS--LTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHS 77
           +LK H W   L    A S  + S   H V+    +  H   L+  FF WA +   +    
Sbjct: 35  ILKTHQWQDSLESRFAESKVVVSDVAHFVI----DRVHDAELALKFFDWASTRPFSCSLD 90

Query: 78  LQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLV 137
             +H +++ +L   + F   + +LE +  +    T    +AL+                 
Sbjct: 91  GVAHSSLLKLLASFRVFPEIELVLENMKAQHLKPTREAFSALI----------------- 133

Query: 138 IFYANLKMTQDGLQVFDQMR-VHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQL-- 194
           + Y         LQ+F  +R +HN +P + A   LLN L K    D+  ++Y KM+Q   
Sbjct: 134 LAYGESGSLDRALQLFHTVREMHNCLPTVVASNSLLNGLVKSGKVDVALQLYDKMLQTDD 193

Query: 195 --GVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHY 252
             G V + +  ++++   C    +++  +L+ +   K     +  YN +I  YCKKG   
Sbjct: 194 GTGAVVDNYTTSIVVKGLCNLGKIEEGRRLVKDRWGKGCVPHVVFYNMIIDGYCKKGDLQ 253

Query: 253 EALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLI 310
            A      ++ +G+ P + TY +LI+GFC+ G      +L  ++  +G   N   +  +I
Sbjct: 254 CATRTLKELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVI 313

Query: 311 DGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIA 370
           D   +   + +A      MA  G  P + TYN+++   CK GRI++A+  L +  E+ + 
Sbjct: 314 DAEFKYGLVTKAAETMRRMAEMGCGPDITTYNTMINFSCKGGRIKEADEFLEKAKERGLL 373

Query: 371 PDNVTCNTLINAYCKIGDTASA-----------------------------------MKV 395
           P+  +   L++AYCK GD   A                                   + V
Sbjct: 374 PNKFSYTPLMHAYCKQGDYVKAAGMLFRIAEIGEKPDLVSYGAFIHGVVVHGEIDVALMV 433

Query: 396 KNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCN 455
           + +M+E G+  D   Y  L+ G CK       K LL  MLD    P    ++ L+DG+  
Sbjct: 434 REKMMEKGVFPDAQIYNVLMSGLCKNGRFPAMKLLLSEMLDRNVQPDVYVFATLMDGFIR 493

Query: 456 KNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVI 515
               +  +K+    + +G+   +  Y A+I+ FCK  K+  A    N M+      D   
Sbjct: 494 NGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNKMKNVHHAPDEYT 553

Query: 516 YTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDR 575
           Y+++   Y +  +  +   +   M + +    +  Y S    + K     D+  +  V R
Sbjct: 554 YSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKA---DMIRAEKVFR 610

Query: 576 GLMS 579
           G+ S
Sbjct: 611 GMKS 614



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 61/260 (23%), Positives = 97/260 (37%), Gaps = 53/260 (20%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           S LN +  +H  PD   +  S ++  Y         L++F QM  H   P++   T L+N
Sbjct: 537 SCLNKMKNVHHAPD--EYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLIN 594

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLL-------CE- 225
              K        KV++ M    +V N+  Y  L+    K+   +K   +        C  
Sbjct: 595 GFCKKADMIRAEKVFRGMKSFDLVPNVVTYTTLVGGFFKAGKPEKATSIFELMLMNGCPP 654

Query: 226 ---------------------MEFKD-------VRADLFT-------------YNTLIAL 244
                                +E KD       +  D FT             YN++I  
Sbjct: 655 NDATFHYLINGLTNTATSPVLIEEKDSMENERSLILDFFTMMLSEGWDQVIAAYNSVIVC 714

Query: 245 YCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR-DI-KGATPN 302
            CK GM   A  +  +M  +G   D V + +++HG C +G+ +E R +   D+ K     
Sbjct: 715 LCKHGMVDTAQLLLTKMLTKGFLIDSVCFTAMLHGLCHKGKSKEWRNIISCDLNKIELQT 774

Query: 303 HVTYTTLIDGYCRANDLEEA 322
            V Y+  +D Y     L EA
Sbjct: 775 AVKYSLTLDKYLYQGRLSEA 794


>gi|224111362|ref|XP_002315826.1| predicted protein [Populus trichocarpa]
 gi|222864866|gb|EEF01997.1| predicted protein [Populus trichocarpa]
          Length = 636

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 142/592 (23%), Positives = 255/592 (43%), Gaps = 75/592 (12%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDF-LSTPSVLNALVKIHDDPDGNSH 131
            ++H+ +S+  ++HIL   + +  A N+L+++ L  + L    V   L    +       
Sbjct: 4   GFRHTTESYCILVHILFYARMYFHANNILKELVLSSWVLPGSDVFEILWTTRNVCVPGFG 63

Query: 132 VLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKM 191
           V   L      L M +   Q F +M    ++P   +C   L+ L+K    D+    ++ M
Sbjct: 64  VFDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDLSRDFFRDM 123

Query: 192 VQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMH 251
           V  G+   +  YN++I   CK  D+     L  +M+   +  D+ TYNTLI  Y K G+ 
Sbjct: 124 VGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGKIGLL 183

Query: 252 YEALAVQDRMEREGISPDIVTYNSLIHGF------------------------------- 280
            E++ + + M+  G  PD++TYN+LI+ F                               
Sbjct: 184 DESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVISYSTL 243

Query: 281 ----CREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGV 334
               C+EG M+ A + F D+   G  PN  TY++LID  C+A +L EA  L + M  + V
Sbjct: 244 IDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHV 303

Query: 335 YPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMK 394
              +VTY ++L  LC+EG + +A  L   M +  + P+      LI+ + K+     AM+
Sbjct: 304 DLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAME 363

Query: 395 VKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYC 454
           + N M E  +  D   +  ++ G C   +++  K ++  M ++G   +   Y+ L+D Y 
Sbjct: 364 LFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYF 423

Query: 455 NKNNEEALLKLLDEF--------------VSRGLC---------------------VDVS 479
              N    + LL+E               +  GLC                      +V+
Sbjct: 424 KAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVA 483

Query: 480 VYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
           VY ALI   CK   +  A++LF+ MQ   ++ D + YT++     + G  +   ++ + M
Sbjct: 484 VYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKM 543

Query: 540 YRRRLMITLKIYRSFSASYAKDNEILDL--FWSHVVDRGLMSKHIFKEMQLR 589
               + + L  Y S     ++  ++     F + ++ +G++         LR
Sbjct: 544 MEMGIELDLYAYTSLVWGLSQCGQVQQARKFLAEMIGKGIIPDETLCTRLLR 595



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 119/475 (25%), Positives = 215/475 (45%), Gaps = 39/475 (8%)

Query: 108 DFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHA 167
           D L+  S+   + K+   PD  ++  + L+  Y  + +  + + +F++M+     P +  
Sbjct: 147 DMLTARSLFEQMKKMGLTPDIVTY--NTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVIT 204

Query: 168 CTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEME 227
              L+NS  K +     ++ +++M    +  N+  Y+ LI A CK   +    K   +M 
Sbjct: 205 YNALINSFCKFKGMLRAFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMT 264

Query: 228 FKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMR 287
              +  + FTY++LI   CK G   EA  + D M +E +  +IVTY +L+ G C EG M 
Sbjct: 265 RVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMN 324

Query: 288 EARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSIL 345
           EA  LFR +   G TPN   YT LI G+ +   +++A+ L   M  K + P ++ + +I+
Sbjct: 325 EAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIV 384

Query: 346 RKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLM 405
             LC E ++ +   ++ EM E  I  + V   TL++AY K G+   A+ +   M + G  
Sbjct: 385 WGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTE 444

Query: 406 LDQFT-----------------------------------YKALIHGFCKAKEMDIAKEL 430
           +   T                                   Y ALI G CK   +  AK+L
Sbjct: 445 VTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKL 504

Query: 431 LFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCK 490
              M D    P   +Y+ ++DG     N +  L + ++ +  G+ +D+  Y +L+    +
Sbjct: 505 FDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGIELDLYAYTSLVWGLSQ 564

Query: 491 KEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
             +V  A++    M G GI+ D  + T L   ++  G      ++ +++  + L+
Sbjct: 565 CGQVQQARKFLAEMIGKGIIPDETLCTRLLRKHYELGNIDEAIELQNELVEKGLI 619



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 65/282 (23%), Positives = 120/282 (42%), Gaps = 37/282 (13%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N    + L+  +  ++     +++F++MR  ++ P +     ++  L  +   +    + 
Sbjct: 341 NLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIM 400

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
            +M + G+ AN  +Y  L+ A  K+ +  +   LL EM        + T+  LI   CK+
Sbjct: 401 TEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKR 460

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTY 306
           G+  EA+    RM    + P++  Y +LI G C+   + +A++LF ++  K   P+ + Y
Sbjct: 461 GLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAY 520

Query: 307 TTLIDGYCRANDLEEALRLRE-----------------------------------VMAA 331
           T +IDG  +  + +EAL +R                                     M  
Sbjct: 521 TAMIDGNLKHGNFQEALNMRNKMMEMGIELDLYAYTSLVWGLSQCGQVQQARKFLAEMIG 580

Query: 332 KGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDN 373
           KG+ P       +LRK  + G I +A  L NE+ EK +   N
Sbjct: 581 KGIIPDETLCTRLLRKHYELGNIDEAIELQNELVEKGLIHGN 622


>gi|242052075|ref|XP_002455183.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
 gi|241927158|gb|EES00303.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
          Length = 892

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 120/417 (28%), Positives = 203/417 (48%), Gaps = 2/417 (0%)

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
           Y  L+  +D   V        +    +  + +L +L K R   +   ++ +MVQ     +
Sbjct: 135 YLRLRRARDAADVLRLSLSSGIAMKQYTASQILFALIKIRQFALARDLFDEMVQCKFPLD 194

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
            ++Y   I A C+  ++D    LL  ME K V+     YN L+   C+     EA+ V++
Sbjct: 195 EYVYTAGIRAYCEIRNLDGARGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKN 254

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGA--TPNHVTYTTLIDGYCRAN 317
            M   GI  D VTY +L++GFCR   +  A  +  D+      P+  + + ++DG  +  
Sbjct: 255 SMVERGIVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRG 314

Query: 318 DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCN 377
            +++A RL   +   G+ P +   N+++ KLCK+ R R+A RL   M  + + P+ VT  
Sbjct: 315 HIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYA 374

Query: 378 TLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA 437
            LI++ CK G    A+ + +RM E G+ +  + Y +LI+G+C+      A+ LL  M++ 
Sbjct: 375 ILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEK 434

Query: 438 GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYA 497
           G +PS  SYS L+ G C K +  + ++L  E    G+  +V  +  LI  FCK   +D A
Sbjct: 435 GLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEA 494

Query: 498 QRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSF 554
            RLF+ M  + ++ + V +  +   Y R G  +    + D M  R L      YRS 
Sbjct: 495 ARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSL 551



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 127/496 (25%), Positives = 235/496 (47%), Gaps = 6/496 (1%)

Query: 92  KHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQ 151
           K + ++Q +   I +R F     + + +V+     D   +V +  +  Y  ++       
Sbjct: 159 KQYTASQILFALIKIRQFALARDLFDEMVQCKFPLD--EYVYTAGIRAYCEIRNLDGARG 216

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           +  +M    +        VL+  L ++       +V   MV+ G+VA+   Y  L++  C
Sbjct: 217 LLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSMVERGIVADEVTYRTLVYGFC 276

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           ++ +++   ++  +M        + + + ++    K+G   +A  +   +   G+ P++ 
Sbjct: 277 RTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLF 336

Query: 272 TYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
             N+LI   C++ R REA RLFR +  +G  PN VTY  LI   C+   +++AL + + M
Sbjct: 337 ACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRM 396

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
             KG+   V  YNS++   C+      A  LLNEM EK +AP   + + LI   C+ GD 
Sbjct: 397 REKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDL 456

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
           ASAM++   M   G+  + +T+  LI GFCK   MD A  L   M+D+   P+  +++ +
Sbjct: 457 ASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVM 516

Query: 450 VDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGI 509
           ++GYC   N     +L D+ V RGL  D   YR+LI   C       A+   + ++ N +
Sbjct: 517 IEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCV 576

Query: 510 LGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYR--SFSASYAKDNEILDL 567
           + +S   T+L Y + + G       I D+M  R + + L  +    ++A    D E + +
Sbjct: 577 VLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKISV 636

Query: 568 FWSHVVDRGLMSKHIF 583
            +  + ++G+   ++F
Sbjct: 637 LFREMKEKGVKPDNVF 652



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 119/466 (25%), Positives = 213/466 (45%), Gaps = 37/466 (7%)

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           LV  +   +  +  L++ D M   + +P + +C+ +++ L K    D  +++   + +LG
Sbjct: 271 LVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHIDKAFRLACHLGELG 330

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
           +V N+   N LI   CK     + E+L   M  + +  +  TY  LI   CK+GM  +AL
Sbjct: 331 MVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDAL 390

Query: 256 AVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGY 313
            + DRM  +GI   +  YNSLI+G+C+     +AR L  ++  KG  P+  +Y+ LI G 
Sbjct: 391 CMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGL 450

Query: 314 CRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDN 373
           CR  DL  A+ L   MA  GV   V T+ +++   CK+G + +A RL ++M +  + P+ 
Sbjct: 451 CRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNE 510

Query: 374 VTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKAL------------------- 414
           VT N +I  YC++G+   A ++ ++M++ GL  D +TY++L                   
Sbjct: 511 VTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMKAKEFVDD 570

Query: 415 ----------------IHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNN 458
                           ++GFCK   +     +   M   G      S++ +V      ++
Sbjct: 571 LENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIVYAALKLHD 630

Query: 459 EEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTS 518
            E +  L  E   +G+  D   +  +I    K+E +  A   ++ M  +G   + V YT 
Sbjct: 631 GEKISVLFREMKEKGVKPDNVFHTCMIDVHSKEENIVQALNCWDKMIADGCSPNVVTYTV 690

Query: 519 LAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
           L     ++G   +   + ++M   R +     Y  F    A + E+
Sbjct: 691 LINHLCKSGYLSSAQILCEEMLVGRFLPNSFTYNCFLDFLANEGEL 736



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 106/416 (25%), Positives = 190/416 (45%), Gaps = 40/416 (9%)

Query: 108 DFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHA 167
           +F     +LN +V+    P   S+  S L+            +++  +M  + +  +++ 
Sbjct: 420 NFHQARGLLNEMVEKGLAPSAASY--SPLIAGLCRKGDLASAMELHREMARNGVSGNVYT 477

Query: 168 CTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEME 227
            T L++   KD   D   +++ KM+   VV N   +NV+I   C+  +V K  +L  +M 
Sbjct: 478 FTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMV 537

Query: 228 FKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMR 287
            + +  D +TY +LI++ C      +A    D +E   +  +  +  +L++GFC+EGR+ 
Sbjct: 538 DRGLTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLT 597

Query: 288 EARR-----------------------------------LFRDIK--GATPNHVTYTTLI 310
           E                                      LFR++K  G  P++V +T +I
Sbjct: 598 ETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMI 657

Query: 311 DGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIA 370
           D + +  ++ +AL   + M A G  P VVTY  ++  LCK G +  A  L  EM   +  
Sbjct: 658 DVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFL 717

Query: 371 PDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL 430
           P++ T N  ++     G+   A  +   +LE G + +  T+  LI GFCKA ++  A +L
Sbjct: 718 PNSFTYNCFLDFLANEGELEKAKVLHATILE-GCLANTVTFNTLIKGFCKAGQIQGAIDL 776

Query: 431 LFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
           +    ++GF P   SYS +++  C   +     +L +E + +GL  D+  Y  LIR
Sbjct: 777 MQNNTESGFFPDCISYSTIINELCKVGDINKAFQLWNEMLYKGLKPDIVAYNILIR 832



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 118/508 (23%), Positives = 205/508 (40%), Gaps = 88/508 (17%)

Query: 83  TMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYAN 142
            +I  L K++ F+ A+ +   +A R     P+ +   + IH                   
Sbjct: 340 ALIDKLCKDRRFREAERLFRGMANRGL--EPNEVTYAILIHS---------------LCK 382

Query: 143 LKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHL 202
             M  D L +FD+MR   +   ++    L+N   +         +  +MV+ G+  +   
Sbjct: 383 RGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAAS 442

Query: 203 YNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRME 262
           Y+ LI   C+  D+    +L  EM    V  +++T+ TLI+ +CK G   EA  + D+M 
Sbjct: 443 YSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMI 502

Query: 263 REGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTY-------------- 306
              + P+ VT+N +I G+CR G +R+A +L+  +  +G TP++ TY              
Sbjct: 503 DSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAM 562

Query: 307 ---------------------TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSIL 345
                                TTL+ G+C+   L E   + + M A+GV   ++++  I+
Sbjct: 563 KAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIV 622

Query: 346 RKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLM 405
               K       + L  EM EK + PDNV    +I+ + K  +   A+   ++M+  G  
Sbjct: 623 YAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHSKEENIVQALNCWDKMIADGCS 682

Query: 406 LDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS------------------ 447
            +  TY  LI+  CK+  +  A+ L   ML   F P+  +Y+                  
Sbjct: 683 PNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSFTYNCFLDFLANEGELEKAKVL 742

Query: 448 ----------------WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
                            L+ G+C     +  + L+      G   D   Y  +I   CK 
Sbjct: 743 HATILEGCLANTVTFNTLIKGFCKAGQIQGAIDLMQNNTESGFFPDCISYSTIINELCKV 802

Query: 492 EKVDYAQRLFNLMQGNGILGDSVIYTSL 519
             ++ A +L+N M   G+  D V Y  L
Sbjct: 803 GDINKAFQLWNEMLYKGLKPDIVAYNIL 830



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 75/255 (29%), Positives = 125/255 (49%), Gaps = 39/255 (15%)

Query: 169 TVLLNSLAKD-RLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEME 227
           T L+    K+ RLT+  + ++ +M   GV  ++  + V+++A  K  D +K+  L  EM+
Sbjct: 584 TTLMYGFCKEGRLTE-TYHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMK 642

Query: 228 FKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMR 287
            K V+ D   +  +I ++ K+    +AL   D+M  +G SP++VTY  LI+  C+ G + 
Sbjct: 643 EKGVKPDNVFHTCMIDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLS 702

Query: 288 EARRL------------------FRD------------------IKGATPNHVTYTTLID 311
            A+ L                  F D                  ++G   N VT+ TLI 
Sbjct: 703 SAQILCEEMLVGRFLPNSFTYNCFLDFLANEGELEKAKVLHATILEGCLANTVTFNTLIK 762

Query: 312 GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAP 371
           G+C+A  ++ A+ L +     G +P  ++Y++I+ +LCK G I  A +L NEM  K + P
Sbjct: 763 GFCKAGQIQGAIDLMQNNTESGFFPDCISYSTIINELCKVGDINKAFQLWNEMLYKGLKP 822

Query: 372 DNVTCNTLINAYCKI 386
           D V  N LI  +C I
Sbjct: 823 DIVAYNILIR-WCNI 836



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 72/248 (29%), Positives = 120/248 (48%), Gaps = 11/248 (4%)

Query: 132 VLSWLVIFYANLKMTQDGLQV---FDQMRVHNLMPH--LHACTVLLNSLAKDRLTDMVWK 186
           ++S+ VI YA LK+  DG ++   F +M+   + P    H C + ++S  K+        
Sbjct: 615 LISFTVIVYAALKL-HDGEKISVLFREMKEKGVKPDNVFHTCMIDVHS--KEENIVQALN 671

Query: 187 VYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYC 246
            + KM+  G   N+  Y VLI+  CKS  +   + L  EM       + FTYN  +    
Sbjct: 672 CWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSFTYNCFLDFLA 731

Query: 247 KKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHV 304
            +G   E   V      EG   + VT+N+LI GFC+ G+++ A  L ++    G  P+ +
Sbjct: 732 NEG-ELEKAKVLHATILEGCLANTVTFNTLIKGFCKAGQIQGAIDLMQNNTESGFFPDCI 790

Query: 305 TYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM 364
           +Y+T+I+  C+  D+ +A +L   M  KG+ P +V YN ++R     G       + ++M
Sbjct: 791 SYSTIINELCKVGDINKAFQLWNEMLYKGLKPDIVAYNILIRWCNIHGEFDKGLGIYSDM 850

Query: 365 NEKKIAPD 372
              K A D
Sbjct: 851 VNLKYADD 858


>gi|12324355|gb|AAG52147.1|AC022355_8 hypothetical protein; 57683-56685 [Arabidopsis thaliana]
          Length = 332

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 100/315 (31%), Positives = 167/315 (53%), Gaps = 6/315 (1%)

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
           P +   T L+N L  +        +  +MV+ G       Y  +I+  CK  D +    L
Sbjct: 8   PDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGH----QPYGTIINGLCKMGDTESALNL 63

Query: 223 LCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR 282
           L +ME   ++A +  YN +I   CK G H  A  +   M  +GI PD++TY+ +I  FCR
Sbjct: 64  LSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCR 123

Query: 283 EGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVT 340
            GR  +A +L RD+  +   P+ VT++ LI+   +   + EA  +   M  +G++P  +T
Sbjct: 124 SGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTIT 183

Query: 341 YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML 400
           YNS++   CK+ R+ DA R+L+ M  K  +PD VT +TLIN YCK     + M++   M 
Sbjct: 184 YNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMH 243

Query: 401 EAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEE 460
             G++ +  TY  LIHGFC+  ++D A++LL  M+ +G +P+Y ++  ++   C+K    
Sbjct: 244 RRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELR 303

Query: 461 ALLKLLDEFVSRGLC 475
               +L++     +C
Sbjct: 304 KAFAILEDLQKSEVC 318



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 99/315 (31%), Positives = 160/315 (50%), Gaps = 6/315 (1%)

Query: 232 RADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARR 291
           R D+ T+ TL+   C +G   +ALA+ DRM  EG  P    Y ++I+G C+ G    A  
Sbjct: 7   RPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESALN 62

Query: 292 LFRDIKGA--TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLC 349
           L   ++      + V Y  +ID  C+      A  L   M  KG++P V+TY+ ++   C
Sbjct: 63  LLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFC 122

Query: 350 KEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQF 409
           + GR  DA +LL +M E++I PD VT + LINA  K G  + A ++   ML  G+     
Sbjct: 123 RSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTI 182

Query: 410 TYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEF 469
           TY ++I GFCK   ++ AK +L  M     SP   ++S L++GYC     +  +++  E 
Sbjct: 183 TYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEM 242

Query: 470 VSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEP 529
             RG+  +   Y  LI  FC+   +D AQ L N+M  +G+  + + + S+  +     E 
Sbjct: 243 HRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKEL 302

Query: 530 KACSDILDDMYRRRL 544
           +    IL+D+ +  +
Sbjct: 303 RKAFAILEDLQKSEV 317



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 160/308 (51%), Gaps = 2/308 (0%)

Query: 261 MEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLE 320
           M   G  PD+VT+ +L++G C EGR+ +A  L    +     H  Y T+I+G C+  D E
Sbjct: 1   MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVD--RMVEEGHQPYGTIINGLCKMGDTE 58

Query: 321 EALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLI 380
            AL L   M    +   VV YN+I+ +LCK+G    A  L  EM++K I PD +T + +I
Sbjct: 59  SALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMI 118

Query: 381 NAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFS 440
           +++C+ G    A ++   M+E  +  D  T+ ALI+   K  ++  A+E+   ML  G  
Sbjct: 119 DSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIF 178

Query: 441 PSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRL 500
           P+  +Y+ ++DG+C ++      ++LD   S+    DV  +  LI  +CK ++VD    +
Sbjct: 179 PTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEI 238

Query: 501 FNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAK 560
           F  M   GI+ ++V YT+L + + + G+  A  D+L+ M    +      ++S  AS   
Sbjct: 239 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCS 298

Query: 561 DNEILDLF 568
             E+   F
Sbjct: 299 KKELRKAF 306



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 68/241 (28%), Positives = 129/241 (53%), Gaps = 2/241 (0%)

Query: 146 TQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNV 205
           T+  L +  +M   ++  H+     +++ L KD        ++ +M   G+  ++  Y+ 
Sbjct: 57  TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116

Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
           +I + C+S      E+LL +M  + +  D+ T++ LI    K+G   EA  +   M R G
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176

Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEAL 323
           I P  +TYNS+I GFC++ R+ +A+R+   +  K  +P+ VT++TLI+GYC+A  ++  +
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGM 236

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
            +   M  +G+    VTY +++   C+ G +  A  LLN M    +AP+ +T  +++ + 
Sbjct: 237 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASL 296

Query: 384 C 384
           C
Sbjct: 297 C 297



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 76/269 (28%), Positives = 147/269 (54%), Gaps = 15/269 (5%)

Query: 112 TPSVLNALVKIHDDPDGNSHVLSWLVIFYANL-KMTQDGLQV-----FDQMRVHNLMPHL 165
           T S LN L K+ +     +H+ + +VI+ A + ++ +DG  +     F +M    + P +
Sbjct: 57  TESALNLLSKMEE-----THIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDV 111

Query: 166 HACTVLLNSLAKD-RLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLC 224
              + +++S  +  R TD   ++ + M++  +  ++  ++ LI+A  K   V + E++  
Sbjct: 112 ITYSGMIDSFCRSGRWTD-AEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYG 170

Query: 225 EMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREG 284
           +M  + +     TYN++I  +CK+    +A  + D M  +  SPD+VT+++LI+G+C+  
Sbjct: 171 DMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAK 230

Query: 285 RMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYN 342
           R+     +F ++  +G   N VTYTTLI G+C+  DL+ A  L  VM + GV P  +T+ 
Sbjct: 231 RVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQ 290

Query: 343 SILRKLCKEGRIRDANRLLNEMNEKKIAP 371
           S+L  LC +  +R A  +L ++ + ++ P
Sbjct: 291 SMLASLCSKKELRKAFAILEDLQKSEVCP 319



 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 71/283 (25%), Positives = 128/283 (45%), Gaps = 24/283 (8%)

Query: 79  QSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALV-----------------K 121
           Q + T+I+ L K    +SA N+L K+      +   + NA++                 +
Sbjct: 42  QPYGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTE 101

Query: 122 IHDD---PDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKD 178
           +HD    PD  ++  S ++  +       D  Q+   M    + P +   + L+N+L K+
Sbjct: 102 MHDKGIFPDVITY--SGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKE 159

Query: 179 RLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTY 238
                  ++Y  M++ G+      YN +I   CK   ++  +++L  M  K    D+ T+
Sbjct: 160 GKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTF 219

Query: 239 NTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI-- 296
           +TLI  YCK       + +   M R GI  + VTY +LIHGFC+ G +  A+ L   +  
Sbjct: 220 STLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMIS 279

Query: 297 KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVV 339
            G  PN++T+ +++   C   +L +A  + E +    V P +V
Sbjct: 280 SGVAPNYITFQSMLASLCSKKELRKAFAILEDLQKSEVCPRIV 322


>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
          Length = 586

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 119/433 (27%), Positives = 213/433 (49%), Gaps = 4/433 (0%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           S  N ++ +H  P       + L+I    +K     L +  QM    + P+++   +L+N
Sbjct: 54  SSFNRMLHMHPPPSIAD--FTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILIN 111

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
           S    +     + V  K+++LG   NI  +N LI   C    + +V  L  +M  +  + 
Sbjct: 112 SFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQP 171

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           ++ TY TLI   CK G    A+ +   ME+    PD+V Y S+I   C++ ++ +A  LF
Sbjct: 172 NVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLF 231

Query: 294 RDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
            ++  +G +P+  TY +LI   C   + +    L   M    + P VV +++++  LCKE
Sbjct: 232 SEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKE 291

Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
           G++ +A+ +++ M ++ + P+ VT N L++ +C   +   A+KV + M+  G   D  +Y
Sbjct: 292 GKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSY 351

Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
             LI+G+CK + ++ A  L   M      P+  +YS L+ G C+    +  + L  E V+
Sbjct: 352 STLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVT 411

Query: 472 RGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKA 531
           RG   D   Y  L+   CK  ++D A  L   ++G+ +  D  IYT +     RAGE +A
Sbjct: 412 RGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEA 471

Query: 532 CSDILDDMYRRRL 544
             D+  ++  + L
Sbjct: 472 ARDLFSNLSSKGL 484



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 130/502 (25%), Positives = 232/502 (46%), Gaps = 29/502 (5%)

Query: 46  VLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIA 105
           +L+N +  CH+  L  AF   A+     ++ ++ +  T+I  L          ++ +K+ 
Sbjct: 108 ILINSF--CHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMI 165

Query: 106 LRDF----LSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNL 161
              F    ++  +++N L K+                       T   +++   M   N 
Sbjct: 166 GEGFQPNVVTYGTLINGLCKVGS---------------------TSAAIRLLRSMEQGNC 204

Query: 162 MPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEK 221
            P +   T +++SL KDR     + ++ +M+  G+  +I  YN LIHA C   +   V  
Sbjct: 205 QPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTA 264

Query: 222 LLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFC 281
           LL EM    +  ++  ++T++   CK+G   EA  V D M + G+ P++VTYN+L+ G C
Sbjct: 265 LLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHC 324

Query: 282 REGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVV 339
               M EA ++F  +  KG  P+ V+Y+TLI+GYC+   +E+A+ L E M  K + P  V
Sbjct: 325 LRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTV 384

Query: 340 TYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRM 399
           TY++++  LC  GR++DA  L +EM  +   PD V+   L++  CK      A+ +   +
Sbjct: 385 TYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAI 444

Query: 400 LEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNE 459
             + +  D   Y  +I G C+A E++ A++L   +   G  P+  +Y+ +++G C +   
Sbjct: 445 EGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLL 504

Query: 460 EALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
               KL  E   +G   +   Y  + R F +  +     +L   M   G   D    T L
Sbjct: 505 AEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVL 564

Query: 520 AYAYWRAGEPKACSDILDDMYR 541
                  G  ++   IL +  +
Sbjct: 565 VEMLSDDGLDQSVKQILSEFLQ 586



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 117/438 (26%), Positives = 208/438 (47%), Gaps = 14/438 (3%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           L +FD+M      P++     L+N L K   T    ++ + M Q     ++ +Y  +I +
Sbjct: 158 LHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDS 217

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
            CK   V +   L  EM  + +   +FTYN+LI   C         A+ + M    I P+
Sbjct: 218 LCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPN 277

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLRE 327
           +V +++++   C+EG++ EA  +   +  +G  PN VTY  L+DG+C  ++++EA+++ +
Sbjct: 278 VVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFD 337

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
            M  KG  P VV+Y++++   CK  RI  A  L  EM  K++ P+ VT +TL++  C +G
Sbjct: 338 TMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVG 397

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
               A+ + + M+  G + D  +Y  L+   CK + +D A  LL  +  +   P    Y+
Sbjct: 398 RLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYT 457

Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGN 507
            ++DG C     EA   L     S+GL  +V  Y  +I   C++  +  A +LF  M+  
Sbjct: 458 IVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRK 517

Query: 508 GILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDL 567
           G   +   Y  +   + R  E      +L +M          + R FSA  +    ++++
Sbjct: 518 GYSPNGCTYNLITRGFLRNNETLRGIQLLQEM----------LARGFSADVSTSTVLVEM 567

Query: 568 FWSHVVDRGLMSKHIFKE 585
                +D+ +  K I  E
Sbjct: 568 LSDDGLDQSV--KQILSE 583



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 92/307 (29%), Positives = 146/307 (47%), Gaps = 3/307 (0%)

Query: 251 HYEA-LAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYT 307
           HY   L++  +M+  GI P+I T N LI+ FC   R+  A  +   I   G  PN  T+ 
Sbjct: 83  HYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFN 142

Query: 308 TLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEK 367
           TLI G C    + E L L + M  +G  P VVTY +++  LCK G    A RLL  M + 
Sbjct: 143 TLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQG 202

Query: 368 KIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIA 427
              PD V   ++I++ CK      A  + + M+  G+    FTY +LIH  C   E    
Sbjct: 203 NCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHV 262

Query: 428 KELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRR 487
             LL  M+++   P+   +S +VD  C +        ++D  + RG+  +V  Y AL+  
Sbjct: 263 TALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDG 322

Query: 488 FCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMIT 547
            C + ++D A ++F+ M   G   D V Y++L   Y +    +    + ++M R+ L+  
Sbjct: 323 HCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPN 382

Query: 548 LKIYRSF 554
              Y + 
Sbjct: 383 TVTYSTL 389



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 81/314 (25%), Positives = 140/314 (44%), Gaps = 2/314 (0%)

Query: 253 EALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR--DIKGATPNHVTYTTLI 310
           +AL+  +RM      P I  +  L+    +         L    D  G  PN  T   LI
Sbjct: 51  DALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILI 110

Query: 311 DGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIA 370
           + +C    L  A  +   +   G  P + T+N+++R LC EG+I +   L ++M  +   
Sbjct: 111 NSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQ 170

Query: 371 PDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL 430
           P+ VT  TLIN  CK+G T++A+++   M +     D   Y ++I   CK +++  A  L
Sbjct: 171 PNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNL 230

Query: 431 LFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCK 490
              M+  G SPS  +Y+ L+   CN    + +  LL+E V+  +  +V ++  ++   CK
Sbjct: 231 FSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCK 290

Query: 491 KEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKI 550
           + KV  A  + ++M   G+  + V Y +L   +    E      + D M  +     +  
Sbjct: 291 EGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVS 350

Query: 551 YRSFSASYAKDNEI 564
           Y +    Y K   I
Sbjct: 351 YSTLINGYCKIQRI 364



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 64/250 (25%), Positives = 112/250 (44%)

Query: 317 NDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTC 376
           N L++AL     M      P +  +  +L  + K         L ++M+   I P+  T 
Sbjct: 47  NTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTL 106

Query: 377 NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD 436
           N LIN++C +     A  V  ++L+ G   +  T+  LI G C   ++     L   M+ 
Sbjct: 107 NILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIG 166

Query: 437 AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDY 496
            GF P+  +Y  L++G C   +  A ++LL          DV VY ++I   CK  +V  
Sbjct: 167 EGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQ 226

Query: 497 AQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSA 556
           A  LF+ M   GI      Y SL +A     E K  + +L++M   ++M  + I+ +   
Sbjct: 227 AFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVD 286

Query: 557 SYAKDNEILD 566
           +  K+ ++++
Sbjct: 287 ALCKEGKVME 296



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 50/233 (21%), Positives = 95/233 (40%), Gaps = 5/233 (2%)

Query: 340 TYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRM 399
           ++N+   K      + DA    N M      P       L+ +  K+   ++ + + ++M
Sbjct: 35  SHNTFHSKSLNFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQM 94

Query: 400 LEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNE 459
              G+  + +T   LI+ FC  + +  A  +L  +L  G  P+  +++ L+ G C +   
Sbjct: 95  DSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKI 154

Query: 460 EALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
             +L L D+ +  G   +V  Y  LI   CK      A RL   M+      D V+YTS+
Sbjct: 155 GEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSI 214

Query: 520 AYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHV 572
             +  +  +     ++  +M  + +  ++  Y S   +     E     W HV
Sbjct: 215 IDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCE-----WKHV 262


>gi|449438586|ref|XP_004137069.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Cucumis sativus]
          Length = 505

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 116/387 (29%), Positives = 196/387 (50%), Gaps = 9/387 (2%)

Query: 149 GLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIH 208
           G ++  QM    + P++   T+L+ +  ++   D    ++ +M  LG+ AN ++Y ++I+
Sbjct: 126 GFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIYTIMIN 185

Query: 209 ACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISP 268
              K        +L  +M+   V  +L+TYN+LI  YC+ G    A  V D + + G++ 
Sbjct: 186 GFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKRGVAC 245

Query: 269 DIVTYNSLIHGFCREGRMREARRLFRDIKGA--TPNHVTYTTLIDGYCRANDLEEALRLR 326
           + VTYN LI G CR+G++ +A  L   +K A   P   T+  L+DG C    L++AL   
Sbjct: 246 NAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKALSYL 305

Query: 327 EVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKI 386
           E +   G+ P +VTYN ++    K G     + L+ EM ++ I+P  VT   L+N + + 
Sbjct: 306 EKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTFVRS 365

Query: 387 GDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSY 446
            D   A ++ + M   GL+ DQ TY  LIHG C    M  A +L   M++    P+   Y
Sbjct: 366 DDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVEMHLQPNDVIY 425

Query: 447 SWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQG 506
           + +++GYC + N    LK L+E V  G+  +V+ Y + I+  CK  K   A+RL   M  
Sbjct: 426 NTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQILCKDGKSIEAKRLLKEMTE 485

Query: 507 NGILGDSVIYTSLAYAYWRAGEPKACS 533
            G+     + +       + G+ K+C+
Sbjct: 486 AGLKPPESLCS-------KVGQAKSCA 505



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 95/321 (29%), Positives = 172/321 (53%), Gaps = 4/321 (1%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N ++ + ++  +      +DG +++ +M++  ++P+L+    L+    +D    + +KV+
Sbjct: 176 NQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVF 235

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
            ++ + GV  N   YN+LI   C+   V K E LL  M+   +     T+N L+   C  
Sbjct: 236 DEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNT 295

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTY 306
           G   +AL+  ++++  G+ P +VTYN LI GF + G       L R++  +G +P+ VTY
Sbjct: 296 GQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTY 355

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
           T L++ + R++D+E+A  +  +M   G+ P   TY  ++  LC +G + +A++L   M E
Sbjct: 356 TILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVE 415

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
             + P++V  NT+IN YCK  ++  A+K    M++ G+  +  +Y + I   CK  +   
Sbjct: 416 MHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQILCKDGKSIE 475

Query: 427 AKELLFGMLDAGFSP--SYCS 445
           AK LL  M +AG  P  S CS
Sbjct: 476 AKRLLKEMTEAGLKPPESLCS 496



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 113/426 (26%), Positives = 194/426 (45%), Gaps = 5/426 (1%)

Query: 144 KMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVA-NIHL 202
           ++ +  L  F  M +    P   +    L+ LAK    D  W  + +   LG    +++ 
Sbjct: 52  QLLEQSLDSFKLMVLKGHSPSSFSFNNALDLLAKSGNLDRTWGFFTEY--LGRTQFDVYS 109

Query: 203 YNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRME 262
           + + I A C++ +V K  +LL +ME   V  ++F Y  LI   C+ G   +A  +  RM+
Sbjct: 110 FGITIKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMD 169

Query: 263 REGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLE 320
             G++ +   Y  +I+GF ++G  ++   L++ +K  G  PN  TY +LI  YCR   L 
Sbjct: 170 DLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLS 229

Query: 321 EALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLI 380
            A ++ + ++ +GV    VTYN ++  LC++G++  A  LL  M    I P   T N L+
Sbjct: 230 LAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLM 289

Query: 381 NAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFS 440
           +  C  G    A+    ++   GL     TY  LI GF K     +  EL+  M D G S
Sbjct: 290 DGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGIS 349

Query: 441 PSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRL 500
           PS  +Y+ L++ +   ++ E   ++       GL  D   Y  LI   C K  +  A +L
Sbjct: 350 PSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKL 409

Query: 501 FNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAK 560
           +  M    +  + VIY ++   Y +          L++M +  +   +  Y S      K
Sbjct: 410 YKSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQILCK 469

Query: 561 DNEILD 566
           D + ++
Sbjct: 470 DGKSIE 475



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 96/393 (24%), Positives = 182/393 (46%), Gaps = 3/393 (0%)

Query: 171 LLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKD 230
           ++N+  + +L +     +K MV  G   +   +N  +    KS ++D+      E     
Sbjct: 44  VINASFQSQLLEQSLDSFKLMVLKGHSPSSFSFNNALDLLAKSGNLDRTWGFFTEY-LGR 102

Query: 231 VRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREAR 290
            + D++++   I  +C+ G   +   +  +ME  G+SP++  Y  LI   CR G + +A+
Sbjct: 103 TQFDVYSFGITIKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAK 162

Query: 291 RLFR--DIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
            +F   D  G   N   YT +I+G+ +    ++   L + M   GV P + TYNS++ + 
Sbjct: 163 VMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEY 222

Query: 349 CKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ 408
           C++G++  A ++ +E++++ +A + VT N LI   C+ G  + A  +  RM  A +    
Sbjct: 223 CRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTT 282

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
            T+  L+ G C   ++D A   L  +   G  P+  +Y+ L+ G+    N   + +L+ E
Sbjct: 283 RTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVRE 342

Query: 469 FVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
              RG+      Y  L+  F + + ++ A  +F+LM+  G++ D   Y  L +     G 
Sbjct: 343 MEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGN 402

Query: 529 PKACSDILDDMYRRRLMITLKIYRSFSASYAKD 561
               S +   M    L     IY +    Y K+
Sbjct: 403 MVEASKLYKSMVEMHLQPNDVIYNTMINGYCKE 435


>gi|317106735|dbj|BAJ53231.1| JHL06P13.11 [Jatropha curcas]
          Length = 826

 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 156/628 (24%), Positives = 263/628 (41%), Gaps = 131/628 (20%)

Query: 16  TISAIMLKGHWAKLLNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYK 75
           TI  I  +  W + L   I  S T T + ++   +++  H P L   FF+WA S      
Sbjct: 35  TIRIIKTETLWQEALE--IRFSETDTRVSEIAHFVFDQIHDPRLGLNFFEWA-SKQSTLS 91

Query: 76  HSLQSH--WTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVL 133
           +SL      +++ +L + + FK  +N+LE +  ++ + T                    L
Sbjct: 92  NSLDGFVCSSLLKLLARFRVFKEIENLLETMKSKELIPT-----------------CEAL 134

Query: 134 SWLVIFYANLKMTQDGLQVFDQ-MRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMV 192
           S+++  YA   + ++ L++++  + VHN +P + AC  LLN L      ++  KVY +MV
Sbjct: 135 SFVISAYAGSGLVKEALELYNTVIDVHNCVPDVFACNSLLNLLVHHGKVEIARKVYDEMV 194

Query: 193 QL-----------------------------------GVVANIHLYNVLIHACCKSSDVD 217
                                                G V NI  YN LI   CK+ D++
Sbjct: 195 DRNGDVDNYTVCIVTKGLCKEGKVEEGRHLIEKRWGKGCVPNIVFYNTLIDGYCKNGDIE 254

Query: 218 KVEKLLCEMEFKDVRADLFTYNTLIALYCKKG-----------MHYEALAVQDR------ 260
           +   L  E++ K     + TY  +I  +CKKG           M    LAV  +      
Sbjct: 255 RANLLFKELKVKGFLPTVKTYGAMINAFCKKGKFEAVDKLLVEMKERGLAVSLQIFNGII 314

Query: 261 ------------------MEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGAT 300
                             M   G  PD+ TYN+LI+G C +G++REA  L      +G  
Sbjct: 315 DARFKHGCEIEAADAVRWMIESGCEPDMATYNTLINGSCSKGKVREAEELLEHAIRRGLF 374

Query: 301 PNHVTYTTLIDGYCR-----------------------------------ANDLEEALRL 325
           PN  +YT LI  + +                                   A +++ AL +
Sbjct: 375 PNKFSYTPLIHAFSKNGEYVRASELLIEMSERGHTLDLIAYGALVHGLVVAGEVDVALTV 434

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
           R+ M  +G+ P    YN ++  LCK+GR   A +LL EM ++ + PD     TL++ + +
Sbjct: 435 RDKMMERGILPDANIYNVLMSGLCKKGRFPAAKQLLVEMLDQNVTPDAFVNATLVDGFIR 494

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            G+   A K+    +E G+        A+I G+CK   M+ A      M +   SP   +
Sbjct: 495 HGNLDEAKKLFQLTIERGIDTSVVECNAMIKGYCKYGMMNDALLCFKRMFNGVHSPDEFT 554

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           YS ++DGY  +N+    L++    + +    +V  + +LI  FC+   ++ A+++F  M+
Sbjct: 555 YSTIIDGYVKQNDLRGALRMFGLMLKKTCKPNVVTFTSLINGFCRNGDLNRAEKVFEEMR 614

Query: 506 GNGILGDSVIYTSLAYAYWRAGE-PKAC 532
             G   + V YT L   + + G+  KAC
Sbjct: 615 SFGFEPNVVTYTILIGYFCKEGKLTKAC 642



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 98/348 (28%), Positives = 165/348 (47%), Gaps = 19/348 (5%)

Query: 157 RVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDV 216
           R H L   L A   L++ L      D+   V  KM++ G++ + ++YNVL+   CK    
Sbjct: 406 RGHTL--DLIAYGALVHGLVVAGEVDVALTVRDKMMERGILPDANIYNVLMSGLCKKGRF 463

Query: 217 DKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSL 276
              ++LL EM  ++V  D F   TL+  + + G   EA  +       GI   +V  N++
Sbjct: 464 PAAKQLLVEMLDQNVTPDAFVNATLVDGFIRHGNLDEAKKLFQLTIERGIDTSVVECNAM 523

Query: 277 IHGFCREGRMREA----RRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAK 332
           I G+C+ G M +A    +R+F  +   +P+  TY+T+IDGY + NDL  ALR+  +M  K
Sbjct: 524 IKGYCKYGMMNDALLCFKRMFNGVH--SPDEFTYSTIIDGYVKQNDLRGALRMFGLMLKK 581

Query: 333 GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
              P VVT+ S++   C+ G +  A ++  EM      P+ VT   LI  +CK G    A
Sbjct: 582 TCKPNVVTFTSLINGFCRNGDLNRAEKVFEEMRSFGFEPNVVTYTILIGYFCKEGKLTKA 641

Query: 393 MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL----------LFGMLDA-GFSP 441
                +ML    + +  T+  L++G      + I+ +            FGM+ + G+  
Sbjct: 642 CFFFEQMLINKCIPNDATFNYLVNGLTNNNGIAISSKRSNSQPNLTLEFFGMMISDGWDW 701

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFC 489
              +Y+ ++   C     +  L+L D+ +S+G   D   + AL+   C
Sbjct: 702 RIAAYNSILLCLCQHKMVKPALQLHDKMMSKGFPPDPVSFIALLHGLC 749



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 89/378 (23%), Positives = 156/378 (41%), Gaps = 74/378 (19%)

Query: 80  SHWTMIHILTKNKHFKSAQNMLEKIALR----DFLSTPSVLNALV---------KIHDD- 125
           S+  +IH  +KN  +  A  +L +++ R    D ++  ++++ LV          + D  
Sbjct: 379 SYTPLIHAFSKNGEYVRASELLIEMSERGHTLDLIAYGALVHGLVVAGEVDVALTVRDKM 438

Query: 126 ------PDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDR 179
                 PD N  + + L+             Q+  +M   N+ P       L++   +  
Sbjct: 439 MERGILPDAN--IYNVLMSGLCKKGRFPAAKQLLVEMLDQNVTPDAFVNATLVDGFIRHG 496

Query: 180 LTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLC-EMEFKDVRA-DLFT 237
             D   K+++  ++ G+  ++   N +I   CK   ++  + LLC +  F  V + D FT
Sbjct: 497 NLDEAKKLFQLTIERGIDTSVVECNAMIKGYCKYGMMN--DALLCFKRMFNGVHSPDEFT 554

Query: 238 YNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK 297
           Y+T+I  Y K+     AL +   M ++   P++VT+ SLI+GFCR G +  A ++F +++
Sbjct: 555 YSTIIDGYVKQNDLRGALRMFGLMLKKTCKPNVVTFTSLINGFCRNGDLNRAEKVFEEMR 614

Query: 298 --GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPG------------------ 337
             G  PN VTYT LI  +C+   L +A    E M      P                   
Sbjct: 615 SFGFEPNVVTYTILIGYFCKEGKLTKACFFFEQMLINKCIPNDATFNYLVNGLTNNNGIA 674

Query: 338 ----------------------------VVTYNSILRKLCKEGRIRDANRLLNEMNEKKI 369
                                       +  YNSIL  LC+   ++ A +L ++M  K  
Sbjct: 675 ISSKRSNSQPNLTLEFFGMMISDGWDWRIAAYNSILLCLCQHKMVKPALQLHDKMMSKGF 734

Query: 370 APDNVTCNTLINAYCKIG 387
            PD V+   L++  C  G
Sbjct: 735 PPDPVSFIALLHGLCLEG 752



 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 56/251 (22%), Positives = 103/251 (41%), Gaps = 49/251 (19%)

Query: 168 CTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEME 227
           C  ++    K  + +     +K+M       +   Y+ +I    K +D+    ++   M 
Sbjct: 520 CNAMIKGYCKYGMMNDALLCFKRMFNGVHSPDEFTYSTIIDGYVKQNDLRGALRMFGLML 579

Query: 228 FKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMR 287
            K  + ++ T+ +LI  +C+ G    A  V + M   G  P++VTY  LI  FC+EG++ 
Sbjct: 580 KKTCKPNVVTFTSLINGFCRNGDLNRAEKVFEEMRSFGFEPNVVTYTILIGYFCKEGKLT 639

Query: 288 EARRLFRD--IKGATPNHVTYTTLIDGY-------------------------------- 313
           +A   F    I    PN  T+  L++G                                 
Sbjct: 640 KACFFFEQMLINKCIPNDATFNYLVNGLTNNNGIAISSKRSNSQPNLTLEFFGMMISDGW 699

Query: 314 --------------CRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
                         C+   ++ AL+L + M +KG  P  V++ ++L  LC EGR++D N 
Sbjct: 700 DWRIAAYNSILLCLCQHKMVKPALQLHDKMMSKGFPPDPVSFIALLHGLCLEGRLQDWNN 759

Query: 360 LLN-EMNEKKI 369
           ++    NE+++
Sbjct: 760 VIPCNFNERQL 770



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/150 (23%), Positives = 72/150 (48%), Gaps = 13/150 (8%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           +VF++MR     P++   T+L+    K+         +++M+    + N   +N L++  
Sbjct: 608 KVFEEMRSFGFEPNVVTYTILIGYFCKEGKLTKACFFFEQMLINKCIPNDATFNYLVNGL 667

Query: 211 CKSSDV-------DKVEKLLCEMEFKDVRAD-----LFTYNTLIALYCKKGMHYEALAVQ 258
             ++ +       +    L  E  F  + +D     +  YN+++   C+  M   AL + 
Sbjct: 668 TNNNGIAISSKRSNSQPNLTLEF-FGMMISDGWDWRIAAYNSILLCLCQHKMVKPALQLH 726

Query: 259 DRMEREGISPDIVTYNSLIHGFCREGRMRE 288
           D+M  +G  PD V++ +L+HG C EGR+++
Sbjct: 727 DKMMSKGFPPDPVSFIALLHGLCLEGRLQD 756


>gi|255572426|ref|XP_002527150.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533489|gb|EEF35232.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 874

 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 126/492 (25%), Positives = 230/492 (46%), Gaps = 37/492 (7%)

Query: 84  MIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANL 143
           +I +L  + H + A+ + +K+  R                   + N      LV  Y   
Sbjct: 153 LIGLLCDSGHLEDARELFDKMPARGC-----------------EPNEFTFGILVRGYCRA 195

Query: 144 KMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLY 203
            +   GL++  QMR   ++P+      L++S  K+  T    K+  KM + G+V ++  +
Sbjct: 196 GLASKGLELLGQMRTMGILPNNVLYNTLISSFCKEGKTHDAEKLVDKMREDGLVPHVETF 255

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFKD----VRADLFTYNTLIALYCKKGMHYEALAVQD 259
           N  I A C S  + +  ++  +M+  +       ++ TY  ++  +CK+GM  EA  + D
Sbjct: 256 NSRISALCGSGKILEASRIFRDMQIDEELGLPHPNVITYKLMLMGFCKEGMLEEAKTLVD 315

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGA--TPNHVTYTTLIDGYCRAN 317
            M+R     ++ +YN  + G  R G++ EA  + +++ G    P+  +Y  ++DG C+  
Sbjct: 316 TMKRNANFINLESYNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNG 375

Query: 318 DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCN 377
            L +A  L  +M   G+ P  VTY+++L   C +G++ +AN LL+EM     +P+  TCN
Sbjct: 376 MLSDARMLMGLMIRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCN 435

Query: 378 TLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA 437
            L+++  K G  + A  +  +M E G  +D  T   +I+  C   ++D A E++ GM   
Sbjct: 436 VLLHSLWKEGRISEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGM--- 492

Query: 438 GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCV-DVSVYRALIRRFCKKEKVDY 496
                     W        N   + + L+D+ +S   C  D+  Y  +I   CK  ++D 
Sbjct: 493 ----------WTHGSAALGNLGNSFIGLVDDTISGKKCTPDLVTYSTIISGLCKAGRLDD 542

Query: 497 AQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSA 556
           A++ F  M   G+  DS IY +  +++ R G+  +   +L DM +R    TL+ Y S   
Sbjct: 543 AKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQVLKDMEKRGCNKTLQTYNSLIL 602

Query: 557 SYAKDNEILDLF 568
                N+I +L+
Sbjct: 603 GLGSKNQIFELY 614



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 104/403 (25%), Positives = 188/403 (46%), Gaps = 25/403 (6%)

Query: 126 PDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVW 185
           P  N      +++ +    M ++   + D M+ +    +L +  + L  L ++      W
Sbjct: 287 PHPNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAW 346

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
            V K+M+ +G+  +I+ YN+++   CK+  +     L+  M    +  D  TY+TL+  Y
Sbjct: 347 IVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGY 406

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNH 303
           C KG  +EA  +   M     SP+  T N L+H   +EGR+ EA  L + +  KG   + 
Sbjct: 407 CSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDT 466

Query: 304 VTYTTLIDGYCRANDLEEALRL-----------------------REVMAAKGVYPGVVT 340
           VT   +I+  C    L++A+ +                        + ++ K   P +VT
Sbjct: 467 VTCNIIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTISGKKCTPDLVT 526

Query: 341 YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML 400
           Y++I+  LCK GR+ DA +   EM  K + PD+   +T I+++C+ G  +SA +V   M 
Sbjct: 527 YSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQVLKDME 586

Query: 401 EAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEE 460
           + G      TY +LI G     ++     L+  M + G SP  C+Y+ +++  C      
Sbjct: 587 KRGCNKTLQTYNSLILGLGSKNQIFELYGLIDEMREKGVSPDVCTYNHMLNCLCEGGRIN 646

Query: 461 ALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNL 503
               +LDE + +G+  ++S +R LI+ FCK      +  +F +
Sbjct: 647 DAPSVLDEMLQKGISPNISSFRILIKAFCKACDFKASHEVFEI 689



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 106/364 (29%), Positives = 166/364 (45%), Gaps = 32/364 (8%)

Query: 155 QMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSS 214
           +M  +N  P+ + C VLL+SL K+        + +KM + G   +    N++I+A C + 
Sbjct: 421 EMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDTVTCNIIINALCNNG 480

Query: 215 DVDKVEKLLCEM-----------------------EFKDVRADLFTYNTLIALYCKKGMH 251
            +DK  +++  M                         K    DL TY+T+I+  CK G  
Sbjct: 481 QLDKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTISGKKCTPDLVTYSTIISGLCKAGRL 540

Query: 252 YEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTL 309
            +A      M  +G+ PD   Y++ IH FCREG++  A ++ +D+  +G      TY +L
Sbjct: 541 DDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQVLKDMEKRGCNKTLQTYNSL 600

Query: 310 IDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI 369
           I G    N + E   L + M  KGV P V TYN +L  LC+ GRI DA  +L+EM +K I
Sbjct: 601 ILGLGSKNQIFELYGLIDEMREKGVSPDVCTYNHMLNCLCEGGRINDAPSVLDEMLQKGI 660

Query: 370 APDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLML---DQFTYKALIHGFCKAKEMDI 426
           +P+  +   LI A+CK    A   K  + + E  L +    +  Y  + +      ++  
Sbjct: 661 SPNISSFRILIKAFCK----ACDFKASHEVFEIALNVCGHKEALYTLMFNELLVGGKVAE 716

Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
           AKEL    LD  F      Y  L+D  C     EA   +L   + +G   D + +  +I 
Sbjct: 717 AKELFETALDRSFDIGNFLYKDLIDRLCKDEKLEAASDVLHRLIDKGYQFDPASFMPVID 776

Query: 487 RFCK 490
            F K
Sbjct: 777 GFGK 780



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 88/364 (24%), Positives = 166/364 (45%), Gaps = 13/364 (3%)

Query: 83  TMIHILTKNKHFKSAQNMLEKIALR----DFLSTPSVLNALVKIHDDPDGNSHVLSWL-- 136
            ++H L K      A+N+L+K+  +    D ++   ++NAL   +   D    +++ +  
Sbjct: 436 VLLHSLWKEGRISEAENLLQKMNEKGYGVDTVTCNIIINALCN-NGQLDKAIEIVNGMWT 494

Query: 137 --VIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQL 194
                  NL  +  GL V D +      P L   + +++ L K    D   K + +M+  
Sbjct: 495 HGSAALGNLGNSFIGL-VDDTISGKKCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSK 553

Query: 195 GVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEA 254
           G+  +  +Y+  IH+ C+   +    ++L +ME +     L TYN+LI     K   +E 
Sbjct: 554 GLQPDSAIYDTFIHSFCREGKISSAFQVLKDMEKRGCNKTLQTYNSLILGLGSKNQIFEL 613

Query: 255 LAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDG 312
             + D M  +G+SPD+ TYN +++  C  GR+ +A  +  ++  KG +PN  ++  LI  
Sbjct: 614 YGLIDEMREKGVSPDVCTYNHMLNCLCEGGRINDAPSVLDEMLQKGISPNISSFRILIKA 673

Query: 313 YCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPD 372
           +C+A D + +  + E+ A          Y  +  +L   G++ +A  L     ++     
Sbjct: 674 FCKACDFKASHEVFEI-ALNVCGHKEALYTLMFNELLVGGKVAEAKELFETALDRSFDIG 732

Query: 373 NVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLF 432
           N     LI+  CK     +A  V +R+++ G   D  ++  +I GF K     +A EL  
Sbjct: 733 NFLYKDLIDRLCKDEKLEAASDVLHRLIDKGYQFDPASFMPVIDGFGKMGNKHVADELAE 792

Query: 433 GMLD 436
            M++
Sbjct: 793 RMME 796



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 58/235 (24%), Positives = 106/235 (45%), Gaps = 4/235 (1%)

Query: 336 PGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKV 395
           P +  YN +L+   +E R+   + L  +M   +++P+  T N LI   C  G    A ++
Sbjct: 110 PSIYLYNVLLKSCIRENRVELVSWLYKDMVLARVSPEAYTFNLLIGLLCDSGHLEDAREL 169

Query: 396 KNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCN 455
            ++M   G   ++FT+  L+ G+C+A       ELL  M   G  P+   Y+ L+  +C 
Sbjct: 170 FDKMPARGCEPNEFTFGILVRGYCRAGLASKGLELLGQMRTMGILPNNVLYNTLISSFCK 229

Query: 456 KNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILG---- 511
           +       KL+D+    GL   V  + + I   C   K+  A R+F  MQ +  LG    
Sbjct: 230 EGKTHDAEKLVDKMREDGLVPHVETFNSRISALCGSGKILEASRIFRDMQIDEELGLPHP 289

Query: 512 DSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
           + + Y  +   + + G  +    ++D M R    I L+ Y  +     ++ ++L+
Sbjct: 290 NVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLE 344


>gi|125542535|gb|EAY88674.1| hypothetical protein OsI_10149 [Oryza sativa Indica Group]
          Length = 333

 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 109/325 (33%), Positives = 169/325 (52%), Gaps = 2/325 (0%)

Query: 155 QMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSS 214
           +MR   L+P     T+++    +  L     +V  +MV  G + ++  YN L++  CK  
Sbjct: 6   EMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKER 65

Query: 215 DVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYN 274
            +   E LL EM  + V  DL T+ TLI  YC +G   +AL + D M  + + PDIVTYN
Sbjct: 66  RLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYN 125

Query: 275 SLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAK 332
           +LI G CR+G + +A  L+ D+  +   PNHVTY+ LID +C    +E+A    + M  K
Sbjct: 126 TLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINK 185

Query: 333 GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
           G+ P ++TYNSI++  C+ G +    + L +M   K++PD +T NTLI+ Y K      A
Sbjct: 186 GILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDA 245

Query: 393 MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
            K+ N M +  +  D  TY  LI+GF     +  A  +   M   G  P   +Y  +++G
Sbjct: 246 FKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMING 305

Query: 453 YCNKNNEEALLKLLDEFVSRGLCVD 477
           +    N +   +L DE + RG   D
Sbjct: 306 HVTAGNSKEAFQLHDEMLQRGFAPD 330



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 101/322 (31%), Positives = 173/322 (53%), Gaps = 2/322 (0%)

Query: 223 LCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR 282
           L EM    +  D   Y  +I  +C+ G+  +AL V+D M   G  PD+VTYN+L++G C+
Sbjct: 4   LREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCK 63

Query: 283 EGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVT 340
           E R+ +A  L  +++  G  P+  T+TTLI GYC    L++AL+L + M  + + P +VT
Sbjct: 64  ERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVT 123

Query: 341 YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML 400
           YN+++  +C++G +  AN L ++M+ ++I P++VT + LI+++C+ G    A    + M+
Sbjct: 124 YNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMI 183

Query: 401 EAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEE 460
             G++ +  TY ++I G+C++  +   ++ L  M+    SP   +Y+ L+ GY  ++   
Sbjct: 184 NKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMH 243

Query: 461 ALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLA 520
              KLL+      +  DV  Y  LI  F     V  A  +F  M   GI  D   Y S+ 
Sbjct: 244 DAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMI 303

Query: 521 YAYWRAGEPKACSDILDDMYRR 542
             +  AG  K    + D+M +R
Sbjct: 304 NGHVTAGNSKEAFQLHDEMLQR 325



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 87/272 (31%), Positives = 141/272 (51%)

Query: 298 GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDA 357
           G  P+ V YT +I G+CRA  + +ALR+R+ M   G  P VVTYN++L  LCKE R+ DA
Sbjct: 11  GLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDA 70

Query: 358 NRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHG 417
             LLNEM E+ + PD  T  TLI+ YC  G    A+++ + ML   L  D  TY  LI G
Sbjct: 71  EGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDG 130

Query: 418 FCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVD 477
            C+  ++D A +L   M      P++ +YS L+D +C K   E     LDE +++G+  +
Sbjct: 131 MCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPN 190

Query: 478 VSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILD 537
           +  Y ++I+ +C+   V   Q+    M  N +  D + Y +L + Y +  +      +L+
Sbjct: 191 IMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLN 250

Query: 538 DMYRRRLMITLKIYRSFSASYAKDNEILDLFW 569
            M + ++   +  Y      ++    + +  W
Sbjct: 251 MMEKEKVQPDVVTYNMLINGFSVHGNVQEAGW 282



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 92/299 (30%), Positives = 164/299 (54%), Gaps = 2/299 (0%)

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
           ++M   G+V +  +Y ++I   C++  +    ++  EM       D+ TYNTL+   CK+
Sbjct: 5   REMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKE 64

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTY 306
               +A  + + M   G+ PD+ T+ +LIHG+C EG++ +A +LF  +  +   P+ VTY
Sbjct: 65  RRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTY 124

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
            TLIDG CR  DL++A  L + M ++ ++P  VTY+ ++   C++G++ DA   L+EM  
Sbjct: 125 NTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMIN 184

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
           K I P+ +T N++I  YC+ G+ +   K   +M+   +  D  TY  LIHG+ K  +M  
Sbjct: 185 KGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHD 244

Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
           A +LL  M      P   +Y+ L++G+    N +    + ++  ++G+  D   Y ++I
Sbjct: 245 AFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMI 303



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 100/319 (31%), Positives = 166/319 (52%), Gaps = 4/319 (1%)

Query: 126 PDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVW 185
           PDG   + + ++  +    +  D L+V D+M     +P +     LLN L K+R      
Sbjct: 14  PDG--VIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAE 71

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
            +  +M + GV  ++  +  LIH  C    +DK  +L   M  + +R D+ TYNTLI   
Sbjct: 72  GLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGM 131

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNH 303
           C++G   +A  + D M    I P+ VTY+ LI   C +G++ +A     ++  KG  PN 
Sbjct: 132 CRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNI 191

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
           +TY ++I GYCR+ ++ +  +  + M    V P ++TYN+++    KE ++ DA +LLN 
Sbjct: 192 MTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNM 251

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
           M ++K+ PD VT N LIN +   G+   A  +  +M   G+  D++TY ++I+G   A  
Sbjct: 252 MEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGN 311

Query: 424 MDIAKELLFGMLDAGFSPS 442
              A +L   ML  GF+P 
Sbjct: 312 SKEAFQLHDEMLQRGFAPD 330



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 68/226 (30%), Positives = 118/226 (52%), Gaps = 2/226 (0%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           LQ+FD M    L P +     L++ + +    D    ++  M    +  N   Y++LI +
Sbjct: 106 LQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDS 165

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
            C+   V+     L EM  K +  ++ TYN++I  YC+ G   +      +M    +SPD
Sbjct: 166 HCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPD 225

Query: 270 IVTYNSLIHGFCREGRMREARRLFR--DIKGATPNHVTYTTLIDGYCRANDLEEALRLRE 327
           ++TYN+LIHG+ +E +M +A +L    + +   P+ VTY  LI+G+    +++EA  + E
Sbjct: 226 LITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFE 285

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDN 373
            M AKG+ P   TY S++      G  ++A +L +EM ++  APD+
Sbjct: 286 KMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPDD 331



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 76/244 (31%), Positives = 116/244 (47%), Gaps = 1/244 (0%)

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           LRE M   G+ P  V Y  ++   C+ G + DA R+ +EM      PD VT NTL+N  C
Sbjct: 4   LRE-MRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLC 62

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           K      A  + N M E G+  D  T+  LIHG+C   ++D A +L   ML+    P   
Sbjct: 63  KERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIV 122

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
           +Y+ L+DG C + + +    L D+  SR +  +   Y  LI   C+K +V+ A    + M
Sbjct: 123 TYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEM 182

Query: 505 QGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
              GIL + + Y S+   Y R+G        L  M   ++   L  Y +    Y K++++
Sbjct: 183 INKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKM 242

Query: 565 LDLF 568
            D F
Sbjct: 243 HDAF 246


>gi|125561029|gb|EAZ06477.1| hypothetical protein OsI_28715 [Oryza sativa Indica Group]
          Length = 621

 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 119/461 (25%), Positives = 213/461 (46%), Gaps = 16/461 (3%)

Query: 83  TMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWL------ 136
           T++  L +++ F   +++  ++  R+  +  +++NA     D P    H+ S L      
Sbjct: 46  TLLMALARHRMFPDMESLASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAP 105

Query: 137 --------VIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
                   V+ Y    M     +VF  M +   +      T LL+ L    +      V+
Sbjct: 106 DSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMTVF 165

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
             M       + H+Y  ++H  C++   ++ E LL E        ++  YN LI  YC  
Sbjct: 166 VGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNA 225

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTY 306
           G    AL V + M+    SP++ TY  LIHG C+ G++  A  LF  +   G  PN VTY
Sbjct: 226 GEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTY 285

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
           T LI G C    L+ A RL  +M   G+ P   T++ ++  LCK  ++ +A   L  + +
Sbjct: 286 TALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVK 345

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
           K +  + V   +LI+  CK G   +A ++  +M+  G + D  +Y +LI G C+ K++  
Sbjct: 346 KGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQ 405

Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
           A  +L  M++ G   S  +Y+ ++D    +   E   K+ D+ ++ G+  D+  Y   +R
Sbjct: 406 ATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVR 465

Query: 487 RFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
            +C++ +++ A+ +   M   G+  + V Y +L   Y   G
Sbjct: 466 SYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLG 506



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 119/455 (26%), Positives = 192/455 (42%), Gaps = 43/455 (9%)

Query: 162 MPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEK 221
           +P L     LL +LA+ R+   +  +  +M       N+  Y  LI+A C + D+   ++
Sbjct: 38  LPPLRCLNTLLMALARHRMFPDMESLASRMP----ARNLRTYTTLINAYCLAGDIPAAKQ 93

Query: 222 LLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFC 281
            L  +    +  D + Y + +  YC+ GM   A  V   M   G      TY +L+HG  
Sbjct: 94  HLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLL 153

Query: 282 REGRMREARRLFRDIK-------------------------------------GATPNHV 304
             G +REA  +F  ++                                     G  PN V
Sbjct: 154 GAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIV 213

Query: 305 TYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM 364
            Y  LIDGYC A ++E AL++ E M      P V TY  ++  LCK G++  A  L + M
Sbjct: 214 VYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRM 273

Query: 365 NEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEM 424
            E  + P+ VT   LI   C  G    A ++ + M   GL+ + +T+  LI   CK +++
Sbjct: 274 VEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKV 333

Query: 425 DIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRAL 484
           + A+  L  ++  G   +   Y+ L+DG C     +A  +L+ + +S G   D   Y +L
Sbjct: 334 EEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSL 393

Query: 485 IRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL 544
           I   C+++K+  A  +   M   GI    V YT +     R    +    I D M    +
Sbjct: 394 IDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGI 453

Query: 545 MITLKIYRSFSASYAKDNEILDL--FWSHVVDRGL 577
              +  Y  F  SY ++  + D       +VDRG+
Sbjct: 454 NPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGV 488



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 116/483 (24%), Positives = 200/483 (41%), Gaps = 72/483 (14%)

Query: 145 MTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYN 204
           M ++ + VF  MR  +  P  H    +++ L +   T+    + ++ +  G   NI +YN
Sbjct: 157 MVREAMTVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYN 216

Query: 205 VLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMERE 264
            LI   C + +++   K+   M+      ++ TY  LI   CK G    A+ +  RM   
Sbjct: 217 ALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEA 276

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDI---------------------------- 296
           G+ P++VTY +LI G C EG ++ A RL   +                            
Sbjct: 277 GLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEA 336

Query: 297 ---------KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRK 347
                    KG   N V YT+LIDG C+   ++ A  L + M ++G  P   +Y+S++  
Sbjct: 337 QLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDG 396

Query: 348 LCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLD 407
           LC++ ++  A  +L +M EK I    VT   +I+   +   +    K+ ++M+  G+  D
Sbjct: 397 LCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPD 456

Query: 408 QFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLD 467
             TY   +  +C+   M+ A+ ++  M+D G  P+  +Y+ L+ GY N           +
Sbjct: 457 IVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFE 516

Query: 468 EFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
             V +G   +   Y  L+R   KK   D +  +                       W+  
Sbjct: 517 VMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDI-----------------------WKIA 553

Query: 528 EPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKEMQ 587
           + K    +L+D+  R+L +   IY  F     +            VDR   +KH F  MQ
Sbjct: 554 DMKDLQVLLEDITERQLPLAADIYSCFIRCLCR------------VDRLEEAKHFFMGMQ 601

Query: 588 LRN 590
             N
Sbjct: 602 NAN 604



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 102/409 (24%), Positives = 170/409 (41%), Gaps = 84/409 (20%)

Query: 127 DGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWK 186
           + N  V + L+  Y N    +  L+VF+ M  +   P++   T L++ L K    +    
Sbjct: 209 EPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMV 268

Query: 187 VYKKMVQLGVVANI-----------------------HL------------YNVLIHACC 211
           ++ +MV+ G+  N+                       HL            ++VLI A C
Sbjct: 269 LFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALC 328

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           K   V++ +  L  +  K V+ +   Y +LI   CK G    A  +  +M  EG  PD  
Sbjct: 329 KREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAH 388

Query: 272 TYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           +Y+SLI G CR+ ++ +A  +  D+  KG   + VTYT +ID   R    E   ++ + M
Sbjct: 389 SYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKM 448

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
            A G+ P +VTY   +R  C+EGR+ DA  ++ +M ++ + P+ VT NTLI  Y  +G  
Sbjct: 449 IATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLV 508

Query: 390 ASAMKVKNRMLEAG-------------------------------------LMLDQFT-- 410
           + A      M+  G                                     ++L+  T  
Sbjct: 509 SQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITER 568

Query: 411 --------YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVD 451
                   Y   I   C+   ++ AK    GM +A  +PS   Y+ ++D
Sbjct: 569 QLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIID 617


>gi|414882130|tpg|DAA59261.1| TPA: hypothetical protein ZEAMMB73_845952 [Zea mays]
          Length = 1603

 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 157/596 (26%), Positives = 244/596 (40%), Gaps = 89/596 (14%)

Query: 38   LTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSA 97
            L +  +H  L  L      P L+   F+WAE+    +  S  +   ++  L +  H ++A
Sbjct: 955  LATGDVHSALRGL------PGLARQLFRWAETTPCGFPRSASAFAAVLIPLARANHIRAA 1008

Query: 98   QNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDG-------- 149
              +  +    D L     L +   +   P     +L  L   Y+     +D         
Sbjct: 1009 YPVSLRALHLDLLLPLVSLLS-APLSTAPRSLLSLLLRLSTKYSKECKARDATLDTCSTL 1067

Query: 150  -LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIH 208
             L  F +M  H + P +  C  +L  L      D +  V+++M++LG+  +I  YN L+ 
Sbjct: 1068 CLSAFREMASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLD 1127

Query: 209  ACCKSSDVDKVEKLLCEMEFK-------DV-----------------------------R 232
            +  K    DKV  LL EME +       DV                             +
Sbjct: 1128 SFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSKK 1187

Query: 233  ADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISP------------------------ 268
            A  FTYN LI     +G   +   +Q  ME EGI P                        
Sbjct: 1188 ASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVK 1247

Query: 269  -----------DIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCR 315
                       D++TYNSL++G+C+ G ++EA  LF D++  G  P  +TY  LIDGYCR
Sbjct: 1248 FAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCR 1307

Query: 316  ANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVT 375
              DLEEA  L+E M  +G  P V TY  +++       +  A    +EM  K + PD   
Sbjct: 1308 LGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFA 1367

Query: 376  CNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGML 435
             NT I A   +GD A A +++  ++  G+  D  TY  LIHG CK   +  AKEL   M+
Sbjct: 1368 YNTRICAELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMV 1427

Query: 436  DAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVD 495
              G  P   +Y+ L+  +C +       K+ +  +S GL      +  +I  +C++  + 
Sbjct: 1428 SNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLY 1487

Query: 496  YAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIY 551
             A   F  M   G+  + + Y  L +A  R G  +  S    +M  R L+     Y
Sbjct: 1488 SAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTY 1543



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 113/380 (29%), Positives = 175/380 (46%), Gaps = 40/380 (10%)

Query: 184  VWKVYKKMVQL---GVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNT 240
            V KVY   +++   G++  +  YN +IH   +S  V+  +    EM    +  D+ TYN+
Sbjct: 1206 VKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNS 1265

Query: 241  LIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KG 298
            L+  YCK G   EAL +   + R G++P ++TYN LI G+CR G + EAR L  ++  +G
Sbjct: 1266 LLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQG 1325

Query: 299  ATPNHVTYTTLIDGY------------------------CRA-----------NDLEEAL 323
              PN  TYT L+ G                         C A            D+  A 
Sbjct: 1326 CLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARAF 1385

Query: 324  RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
             LREV+  +G+    VTYN ++  LCK G ++DA  L  +M    + PD +T   LI+A+
Sbjct: 1386 ELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAH 1445

Query: 384  CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY 443
            C+ G    A K+ N M+  GL+    T+  +IH +C+   +  A      ML+ G  P+ 
Sbjct: 1446 CERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNE 1505

Query: 444  CSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNL 503
             +Y+ L+   C     +       E + RGL  +   Y  LI   CK    + A R +  
Sbjct: 1506 ITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFE 1565

Query: 504  MQGNGILGDSVIYTSLAYAY 523
            M  NGI  D + + +L   +
Sbjct: 1566 MHQNGIHPDYLTHKALLKGF 1585



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 94/378 (24%), Positives = 173/378 (45%), Gaps = 40/378 (10%)

Query: 151  QVFD---QMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
            +V+D   +M    +MP +     +++ L +  L +     + +M  +G++ ++  YN L+
Sbjct: 1208 KVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLL 1267

Query: 208  HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
            +  CK+ ++ +   L  ++    +   + TYN LI  YC+ G   EA  +++ M  +G  
Sbjct: 1268 NGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGCL 1327

Query: 268  PDIVTYNSLIHGFCREGRMREARRLFRD-------------------------------- 295
            P++ TY  L+ G      +  AR  F +                                
Sbjct: 1328 PNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARAFEL 1387

Query: 296  -----IKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
                 ++G + + VTY  LI G C+  +L++A  L+  M + G+ P  +TY  ++   C+
Sbjct: 1388 REVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCE 1447

Query: 351  EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
             G +R+A ++ N M    + P  VT   +I+AYC+ G+  SA     +MLE G+  ++ T
Sbjct: 1448 RGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEIT 1507

Query: 411  YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFV 470
            Y  LIH  C+     +A      ML+ G   +  +Y+ L+DG C   N E  ++   E  
Sbjct: 1508 YNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMH 1567

Query: 471  SRGLCVDVSVYRALIRRF 488
              G+  D   ++AL++ F
Sbjct: 1568 QNGIHPDYLTHKALLKGF 1585



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 87/285 (30%), Positives = 144/285 (50%), Gaps = 2/285 (0%)

Query: 136  LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
            L+  Y  L   ++   + ++M     +P++   T+L+      R   M  + + +M+  G
Sbjct: 1301 LIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKG 1360

Query: 196  VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
            +  +   YN  I A     D+ +  +L   +  + + +D  TYN LI   CK G   +A 
Sbjct: 1361 LQPDCFAYNTRICAELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAK 1420

Query: 256  AVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGY 313
             +Q +M   G+ PD +TY  LIH  C  G +REAR++F ++   G  P+ VT+T +I  Y
Sbjct: 1421 ELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAY 1480

Query: 314  CRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDN 373
            CR  +L  A      M  +GV P  +TYN ++  LC+ GR + A+   +EM E+ +  + 
Sbjct: 1481 CRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANK 1540

Query: 374  VTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGF 418
             T   LI+  CK+G+   AM+    M + G+  D  T+KAL+ GF
Sbjct: 1541 YTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALLKGF 1585


>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
          Length = 817

 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 129/460 (28%), Positives = 213/460 (46%), Gaps = 56/460 (12%)

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
           P++ A   +++   K+   +    ++K+MVQ G+  ++  YN ++HA CK+  +DK E  
Sbjct: 220 PNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAF 279

Query: 223 LCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR 282
           L +M  K V  + +TYN LI  Y   G   EA+ V   M R  I PD+VT + L+   C+
Sbjct: 280 LRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCK 339

Query: 283 EGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVT 340
            G+++EAR +F  +  KG  P+  +Y  +++GY     L +   L ++M   G+ P   T
Sbjct: 340 YGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYT 399

Query: 341 YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML 400
           +N +++     G +  A  + NEM +  + PD VT  T+I A C+IG    AM+  N+M+
Sbjct: 400 FNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMI 459

Query: 401 EAGLMLDQFTYKALIHGFCKAKEMDIAKELLF-----GM--------------------- 434
           + G+  D++ Y  LI GFC    +  AKEL+      GM                     
Sbjct: 460 DQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVM 519

Query: 435 ---------LDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
                    ++ G  P    Y+ L+DGYC     E  L++ D  VS G+  +V  Y  L+
Sbjct: 520 DAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLV 579

Query: 486 RRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
             +CK  ++D    LF  M   GI   +++Y+ +    + AG              R + 
Sbjct: 580 NGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAG--------------RTVP 625

Query: 546 ITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKE 585
             +K +    +  A     +D+   ++V RGL     F E
Sbjct: 626 AKMKFHEMTESGIA-----MDICTYNIVLRGLFKNRCFDE 660



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 126/433 (29%), Positives = 209/433 (48%), Gaps = 16/433 (3%)

Query: 162 MPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVV--ANIHLYNVLIHACCKSSDVDKV 219
           +P + + ++LL SL     +     + + M + G V   N+  YN +I    K  DV+K 
Sbjct: 182 VPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKA 241

Query: 220 EKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHG 279
             L  EM  + +  DL TYN+++   CK     +A A   +M  + + P+  TYN+LI+G
Sbjct: 242 CDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYG 301

Query: 280 FCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPG 337
           +   G+ +EA R+F++++     P+ VT + L+   C+   ++EA  + + MA KG  P 
Sbjct: 302 YSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPD 361

Query: 338 VVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKN 397
           V +YN +L     +G + D   L + M    IAPD  T N LI AY   G    AM + N
Sbjct: 362 VFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFN 421

Query: 398 RMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKN 457
            M + G+  D  TY+ +I   C+  +MD A E    M+D G +P   +Y+ L+ G+C   
Sbjct: 422 EMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHG 481

Query: 458 NEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYT 517
           +     +L+ E ++ G+ +D+  + ++I   CK  +V  AQ +F+L    G+  D+V+Y 
Sbjct: 482 SLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYN 541

Query: 518 SLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGL 577
            L   Y   G+ +    + D M    +   +  Y +    Y K   I         D GL
Sbjct: 542 MLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRI---------DEGL 592

Query: 578 MSKHIFKEMQLRN 590
               +F+EM  R 
Sbjct: 593 ---SLFREMLQRG 602



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 126/517 (24%), Positives = 228/517 (44%), Gaps = 26/517 (5%)

Query: 60  SCAFFK-WAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNA 118
           +C  FK   +  +P     L ++ +++H L K +    A+  L ++  +  L      N 
Sbjct: 241 ACDLFKEMVQRGIP---PDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNN 297

Query: 119 LVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKD 178
           L+       G S    W           ++ ++VF +MR H+++P +   ++L+ SL K 
Sbjct: 298 LIY------GYSSTGQW-----------KEAVRVFKEMRRHSILPDVVTLSMLMGSLCKY 340

Query: 179 RLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTY 238
                   V+  M   G   ++  YN++++       +  +  L   M    +  D +T+
Sbjct: 341 GKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTF 400

Query: 239 NTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI-- 296
           N LI  Y   GM  +A+ + + M   G+ PD+VTY ++I   CR G+M +A   F  +  
Sbjct: 401 NVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMID 460

Query: 297 KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRD 356
           +G  P+   Y  LI G+C    L +A  L   +   G++  +V ++SI+  LCK GR+ D
Sbjct: 461 QGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMD 520

Query: 357 ANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIH 416
           A  + +      + PD V  N L++ YC +G    A++V + M+ AG+  +   Y  L++
Sbjct: 521 AQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVN 580

Query: 417 GFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCV 476
           G+CK   +D    L   ML  G  PS   YS ++DG               E    G+ +
Sbjct: 581 GYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAM 640

Query: 477 DVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDIL 536
           D+  Y  ++R   K    D A  LF  ++   +  + +   ++    ++    +   D+ 
Sbjct: 641 DICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLF 700

Query: 537 DDMYRRRLMITLKIYRSFSASYAKDN---EILDLFWS 570
             + R RL+ ++  Y     +  K+    E  D+F S
Sbjct: 701 ASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSS 737



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 113/449 (25%), Positives = 210/449 (46%), Gaps = 11/449 (2%)

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLA-KDRLTDMVWKVYKKMVQLGVVA 198
           Y  +K  +D   VFD M +    P + +  ++LN  A K  L DM   ++  M+  G+  
Sbjct: 340 YGKIKEARD---VFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMT-DLFDLMLGDGIAP 395

Query: 199 NIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQ 258
           + + +NVLI A      +DK   +  EM    V+ D+ TY T+IA  C+ G   +A+   
Sbjct: 396 DFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKF 455

Query: 259 DRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRA 316
           ++M  +G++PD   YN LI GFC  G + +A+ L  +I   G   + V ++++I+  C+ 
Sbjct: 456 NQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKL 515

Query: 317 NDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTC 376
             + +A  + ++    G++P  V YN ++   C  G++  A R+ + M    I P+ V  
Sbjct: 516 GRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGY 575

Query: 377 NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD 436
            TL+N YCKIG     + +   ML+ G+      Y  +I G  +A     AK     M +
Sbjct: 576 GTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTE 635

Query: 437 AGFSPSYCSYSWLVDG-YCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVD 495
           +G +   C+Y+ ++ G + N+  +EA+  L  E  +  + +++     +I    +  +V+
Sbjct: 636 SGIAMDICTYNIVLRGLFKNRCFDEAIF-LFKELRAMNVKINIITLNTMIDGMFQTRRVE 694

Query: 496 YAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFS 555
            A+ LF  +  + ++   V Y+ +     + G  +   D+   M         ++     
Sbjct: 695 EAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVV 754

Query: 556 ASYAKDNEIL--DLFWSHVVDRGLMSKHI 582
               K NEI+    + S + +R    +H+
Sbjct: 755 RELLKKNEIVRAGAYLSKIDERNFSLEHL 783



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 91/366 (24%), Positives = 170/366 (46%), Gaps = 2/366 (0%)

Query: 131 HVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKK 190
           +  + L+  YAN  M    + +F++MR H + P +     ++ +L +    D   + + +
Sbjct: 398 YTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQ 457

Query: 191 MVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGM 250
           M+  GV  + + YN LI   C    + K ++L+ E+    +  D+  ++++I   CK G 
Sbjct: 458 MIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGR 517

Query: 251 HYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTT 308
             +A  + D     G+ PD V YN L+ G+C  G+M +A R+F  +   G  PN V Y T
Sbjct: 518 VMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGT 577

Query: 309 LIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKK 368
           L++GYC+   ++E L L   M  +G+ P  + Y+ I+  L + GR   A    +EM E  
Sbjct: 578 LVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESG 637

Query: 369 IAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAK 428
           IA D  T N ++    K      A+ +   +    + ++  T   +I G  + + ++ AK
Sbjct: 638 IAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAK 697

Query: 429 ELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRF 488
           +L   +  +   PS  +YS ++     +   E    +     + G   +  +   ++R  
Sbjct: 698 DLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVREL 757

Query: 489 CKKEKV 494
            KK ++
Sbjct: 758 LKKNEI 763



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 86/315 (27%), Positives = 142/315 (45%), Gaps = 40/315 (12%)

Query: 254 ALAVQDRMEREGISPDIVTYNSLIHGFCR------------------------------- 282
           ALA   ++ R G+  +I+  N L+ GFC                                
Sbjct: 133 ALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILL 192

Query: 283 -----EGRMREARRLFRDIK--GA--TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKG 333
                +G+  +A  L R +   GA  +PN V Y T+IDG+ +  D+ +A  L + M  +G
Sbjct: 193 KSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRG 252

Query: 334 VYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAM 393
           + P +VTYNS++  LCK   +  A   L +M  K++ P+N T N LI  Y   G    A+
Sbjct: 253 IPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAV 312

Query: 394 KVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGY 453
           +V   M    ++ D  T   L+   CK  ++  A+++   M   G +P   SY+ +++GY
Sbjct: 313 RVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGY 372

Query: 454 CNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDS 513
             K     +  L D  +  G+  D   +  LI+ +     +D A  +FN M+ +G+  D 
Sbjct: 373 ATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDV 432

Query: 514 VIYTSLAYAYWRAGE 528
           V Y ++  A  R G+
Sbjct: 433 VTYRTVIAALCRIGK 447



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 71/278 (25%), Positives = 116/278 (41%), Gaps = 38/278 (13%)

Query: 300 TPNHVTYTTLID-----------------------------------GYCRANDLEEALR 324
           +P   TY  L+D                                   G+C A   +EAL 
Sbjct: 111 SPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALD 170

Query: 325 -LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI--APDNVTCNTLIN 381
            L       G  P V +Y+ +L+ LC +G+   A+ LL  M E     +P+ V  NT+I+
Sbjct: 171 ILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVID 230

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
            + K GD   A  +   M++ G+  D  TY +++H  CKA+ MD A+  L  M++    P
Sbjct: 231 GFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLP 290

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
           +  +Y+ L+ GY +    +  +++  E     +  DV     L+   CK  K+  A+ +F
Sbjct: 291 NNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVF 350

Query: 502 NLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
           + M   G   D   Y  +   Y   G     +D+ D M
Sbjct: 351 DTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLM 388



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 73/291 (25%), Positives = 126/291 (43%), Gaps = 15/291 (5%)

Query: 143 LKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHL 202
           L    D   +FD      L P      +L++        +   +V+  MV  G+  N+  
Sbjct: 515 LGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVG 574

Query: 203 YNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRME 262
           Y  L++  CK   +D+   L  EM  + ++     Y+ +I    + G    A      M 
Sbjct: 575 YGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMT 634

Query: 263 REGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGATP--NHVTYTTLIDGYCRANDLE 320
             GI+ DI TYN ++ G  +     EA  LF++++      N +T  T+IDG  +   +E
Sbjct: 635 ESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVE 694

Query: 321 EALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLI 380
           EA  L   ++   + P VVTY+ ++  L KEG + +A  + + M      P++   N ++
Sbjct: 695 EAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVV 754

Query: 381 ------NAYCKIGDTASAMKVKNRMLE---AGLMLDQFTYKALIHGFCKAK 422
                 N   + G   S +  +N  LE   A L++D F+ K    G C+ +
Sbjct: 755 RELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSK----GTCREQ 801



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 69/296 (23%), Positives = 136/296 (45%), Gaps = 6/296 (2%)

Query: 94  FKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVF 153
           F S  N L K+     +   ++ +  V +   PD  + V + L+  Y  +   +  L+VF
Sbjct: 505 FSSIINNLCKLG--RVMDAQNIFDLTVNVGLHPD--AVVYNMLMDGYCLVGKMEKALRVF 560

Query: 154 DQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKS 213
           D M    + P++     L+N   K    D    ++++M+Q G+  +  LY+++I    ++
Sbjct: 561 DAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEA 620

Query: 214 SDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTY 273
                 +    EM    +  D+ TYN ++    K     EA+ +   +    +  +I+T 
Sbjct: 621 GRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITL 680

Query: 274 NSLIHGFCREGRMREARRLFRDIKGA--TPNHVTYTTLIDGYCRANDLEEALRLREVMAA 331
           N++I G  +  R+ EA+ LF  I  +   P+ VTY+ +I    +   +EEA  +   M  
Sbjct: 681 NTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQN 740

Query: 332 KGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
            G  P     N ++R+L K+  I  A   L++++E+  + +++T   L++ +   G
Sbjct: 741 AGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKG 796



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/243 (20%), Positives = 95/243 (39%), Gaps = 41/243 (16%)

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
           + ++P + T   L++   +      A+    ++L  GL ++      L+ GFC+AK  D 
Sbjct: 108 RVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDE 167

Query: 427 AKELLF--------------------GMLDAG------------------FSPSYCSYSW 448
           A ++L                      + D G                   SP+  +Y+ 
Sbjct: 168 ALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNT 227

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG 508
           ++DG+  + +      L  E V RG+  D+  Y +++   CK   +D A+     M    
Sbjct: 228 VIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKR 287

Query: 509 ILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM---ITLKIYRSFSASYAKDNEIL 565
           +L ++  Y +L Y Y   G+ K    +  +M R  ++   +TL +       Y K  E  
Sbjct: 288 VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEAR 347

Query: 566 DLF 568
           D+F
Sbjct: 348 DVF 350


>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 506

 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 101/308 (32%), Positives = 166/308 (53%), Gaps = 3/308 (0%)

Query: 260 RMEREGISP-DIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRA 316
           RM R+G  P +  +YN +I G  R GR  +A  +F ++  +   PNH+TY T+IDG+ + 
Sbjct: 4   RMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKG 63

Query: 317 NDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTC 376
            DLE   RLR+ M   G+ P  +TYN +L  LC+ GR+ + + LL+EM  +K+ PD  T 
Sbjct: 64  GDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTY 123

Query: 377 NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD 436
           + L +   + GD+ + + +  + L+ G+ +  +T   L++G CK  ++ IA+E+L  +++
Sbjct: 124 SILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVN 183

Query: 437 AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDY 496
           AG  P+   Y+ L++GYC     E       +  SR +  D   Y ALI   CK E++  
Sbjct: 184 AGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITN 243

Query: 497 AQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSA 556
           AQ L   MQ NG+      + +L  AY R G+ + C  +L +M    L   +  Y S   
Sbjct: 244 AQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVN 303

Query: 557 SYAKDNEI 564
           ++ K+ +I
Sbjct: 304 AFCKNGKI 311



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 106/409 (25%), Positives = 199/409 (48%), Gaps = 2/409 (0%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D ++VFD+M    ++P+      +++   K    +  +++  +MV  G+  N   YNVL+
Sbjct: 33  DAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLL 92

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
              C++  + +   LL EM  + +  D FTY+ L     + G     L++  +  + G++
Sbjct: 93  SGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVT 152

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
               T + L++G C++G++  A  + + +   G  P  V Y TLI+GYC+  +LE A   
Sbjct: 153 IGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFST 212

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
              M ++ + P  +TYN+++  LCK  RI +A  LL EM +  + P   T NTLI+AY +
Sbjct: 213 FGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGR 272

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            G       V + M E GL  +  +Y ++++ FCK  ++  A  +L  M      P+   
Sbjct: 273 TGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQV 332

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+ ++D Y      +    L+++  S G+   +  Y  LI+  C + ++  A+ + N + 
Sbjct: 333 YNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLS 392

Query: 506 GNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSF 554
            + ++ D+V Y +L  A    G      D+   M++  +  T++ Y   
Sbjct: 393 NHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQL 441



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 104/394 (26%), Positives = 188/394 (47%), Gaps = 2/394 (0%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           + D+M    ++P     ++L + L+++  +  +  ++ K ++ GV    +  ++L++  C
Sbjct: 107 LLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLC 166

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           K   V   E++L  +    +      YNTLI  YC+ G    A +   +M+   I PD +
Sbjct: 167 KDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHI 226

Query: 272 TYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           TYN+LI+G C+  R+  A+ L  +++  G  P   T+ TLID Y R   LE+   +   M
Sbjct: 227 TYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEM 286

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
              G+ P VV+Y SI+   CK G+I +A  +L++M  K + P+    N +I+AY + G  
Sbjct: 287 QENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPN 346

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
             A  +  +M   G+     TY  LI G C   ++  A+E++  + +    P   SY+ L
Sbjct: 347 DQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTL 406

Query: 450 VDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGI 509
           +   C + N +  L L       G+   V  Y  LI       +++  + L+  M  N +
Sbjct: 407 ISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNV 466

Query: 510 LGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRR 543
           +  + I+  +  AY + G      D+  +M ++R
Sbjct: 467 VPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKR 500



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 102/331 (30%), Positives = 161/331 (48%), Gaps = 2/331 (0%)

Query: 199 NIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQ 258
           N   YNV+I    ++       ++  EM  + V  +  TYNT+I  + K G       ++
Sbjct: 14  NAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLR 73

Query: 259 DRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRA 316
           D+M   G+ P+ +TYN L+ G CR GRM E   L  ++  +   P+  TY+ L DG  R 
Sbjct: 74  DQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRN 133

Query: 317 NDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTC 376
            D +  L L       GV  G  T + +L  LCK+G++  A  +L  +    + P  V  
Sbjct: 134 GDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIY 193

Query: 377 NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD 436
           NTLIN YC+ G+   A     +M    +  D  TY ALI+G CKA+ +  A++LL  M D
Sbjct: 194 NTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQD 253

Query: 437 AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDY 496
            G +P+  +++ L+D Y      E    +L E    GL  +V  Y +++  FCK  K+  
Sbjct: 254 NGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPE 313

Query: 497 AQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
           A  + + M    +L ++ +Y ++  AY   G
Sbjct: 314 AVAILDDMFHKDVLPNAQVYNAIIDAYVEHG 344



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 71/318 (22%), Positives = 142/318 (44%), Gaps = 22/318 (6%)

Query: 35  ASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHF 94
           A  + +  I+  L+N Y  C    L  AF  + +    + K    ++  +I+ L K +  
Sbjct: 184 AGLVPTRVIYNTLINGY--CQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERI 241

Query: 95  KSAQNMLEKIALRDFLSTPSVLNALVKIHD---------------DPDG-NSHVLSWLVI 138
            +AQ++L ++       T    N L+  +                  +G   +V+S+  I
Sbjct: 242 TNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSI 301

Query: 139 FYANLKMTQ--DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGV 196
             A  K  +  + + + D M   +++P+      ++++  +    D  + + +KM   G+
Sbjct: 302 VNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGI 361

Query: 197 VANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALA 256
             +I  YN+LI   C  S + + E+++  +    +  D  +YNTLI+  C +G   +AL 
Sbjct: 362 SPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALD 421

Query: 257 VQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYC 314
           +Q RM + GI   + TY+ LI G    GR+ E   L++ +      P++  +  +++ Y 
Sbjct: 422 LQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYS 481

Query: 315 RANDLEEALRLREVMAAK 332
           +  +  +A  LR+ M  K
Sbjct: 482 KYGNEIKAEDLRKEMLQK 499


>gi|115475796|ref|NP_001061494.1| Os08g0300700 [Oryza sativa Japonica Group]
 gi|34015356|gb|AAQ56545.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|34015369|gb|AAQ56557.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|35215067|dbj|BAC92425.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113623463|dbj|BAF23408.1| Os08g0300700 [Oryza sativa Japonica Group]
 gi|215678779|dbj|BAG95216.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|258644436|dbj|BAI39696.1| putative fertility restorer [Oryza sativa Indica Group]
          Length = 735

 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 119/461 (25%), Positives = 213/461 (46%), Gaps = 16/461 (3%)

Query: 83  TMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWL------ 136
           T++  L +++ F   +++  ++  R+  +  +++NA     D P    H+ S L      
Sbjct: 46  TLLMALARHRMFPDMESLASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAP 105

Query: 137 --------VIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
                   V+ Y    M     +VF  M +   +      T LL+ L    +      V+
Sbjct: 106 DSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVF 165

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
             M       + H+Y  ++H  C++   ++ E LL E        ++  YN LI  YC  
Sbjct: 166 VGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNA 225

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTY 306
           G    AL V + M+    SP++ TY  LIHG C+ G++  A  LF  +   G  PN VTY
Sbjct: 226 GEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTY 285

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
           T LI G C    L+ A RL  +M   G+ P   T++ ++  LCK  ++ +A   L  + +
Sbjct: 286 TALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVK 345

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
           K +  + V   +LI+  CK G   +A ++  +M+  G + D  +Y +LI G C+ K++  
Sbjct: 346 KGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQ 405

Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
           A  +L  M++ G   S  +Y+ ++D    +   E   K+ D+ ++ G+  D+  Y   +R
Sbjct: 406 ATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVR 465

Query: 487 RFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
            +C++ +++ A+ +   M   G+  + V Y +L   Y   G
Sbjct: 466 SYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLG 506



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 121/455 (26%), Positives = 195/455 (42%), Gaps = 43/455 (9%)

Query: 162 MPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEK 221
           +P L     LL +LA+ R+   +  +  +M       N+  Y  LI+A C + D+   ++
Sbjct: 38  LPPLRCLNTLLMALARHRMFPDMESLASRMP----ARNLRTYTTLINAYCLAGDIPAAKQ 93

Query: 222 LLCEMEFKDVRADLFTYNTLIALYCKKGMHY----------------------------- 252
            L  +    +  D + Y + +  YC+ GM                               
Sbjct: 94  HLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLL 153

Query: 253 ------EALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHV 304
                 EA+AV   M  +  +PD   Y +++HG C  GR  EA  L  +    G  PN V
Sbjct: 154 GAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIV 213

Query: 305 TYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM 364
            Y  LIDGYC A ++E AL++ E M      P V TY  ++  LCK G++  A  L + M
Sbjct: 214 VYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRM 273

Query: 365 NEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEM 424
            E  + P+ VT   LI   C  G    A ++ + M   GL+ + +T+  LI   CK +++
Sbjct: 274 VEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKV 333

Query: 425 DIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRAL 484
           + A+  L  ++  G   +   Y+ L+DG C     +A  +L+ + +S G   D   Y +L
Sbjct: 334 EEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSL 393

Query: 485 IRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL 544
           I   C+++K+  A  +   M   GI    V YT +     R    +    I D M    +
Sbjct: 394 IDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGI 453

Query: 545 MITLKIYRSFSASYAKDNEILDL--FWSHVVDRGL 577
              +  Y  F  SY ++  + D       +VDRG+
Sbjct: 454 NPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGV 488



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 116/483 (24%), Positives = 200/483 (41%), Gaps = 72/483 (14%)

Query: 145 MTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYN 204
           M ++ + VF  MR  +  P  H    +++ L +   T+    + ++ +  G   NI +YN
Sbjct: 157 MVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYN 216

Query: 205 VLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMERE 264
            LI   C + +++   K+   M+      ++ TY  LI   CK G    A+ +  RM   
Sbjct: 217 ALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEA 276

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDI---------------------------- 296
           G+ P++VTY +LI G C EG ++ A RL   +                            
Sbjct: 277 GLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEA 336

Query: 297 ---------KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRK 347
                    KG   N V YT+LIDG C+   ++ A  L + M ++G  P   +Y+S++  
Sbjct: 337 QLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDG 396

Query: 348 LCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLD 407
           LC++ ++  A  +L +M EK I    VT   +I+   +   +    K+ ++M+  G+  D
Sbjct: 397 LCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPD 456

Query: 408 QFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLD 467
             TY   +  +C+   M+ A+ ++  M+D G  P+  +Y+ L+ GY N           +
Sbjct: 457 IVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFE 516

Query: 468 EFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
             V +G   +   Y  L+R   KK   D +  +                       W+  
Sbjct: 517 VMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDI-----------------------WKIA 553

Query: 528 EPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKEMQ 587
           + K    +L+D+  R+L +   IY  F     +            VDR   +KH F  MQ
Sbjct: 554 DMKDLQVLLEDITERQLPLAADIYSCFIRCLCR------------VDRLEEAKHFFMGMQ 601

Query: 588 LRN 590
             N
Sbjct: 602 NAN 604



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 124/525 (23%), Positives = 208/525 (39%), Gaps = 84/525 (16%)

Query: 127 DGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWK 186
           + N  V + L+  Y N    +  L+VF+ M  +   P++   T L++ L K    +    
Sbjct: 209 EPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMV 268

Query: 187 VYKKMVQLGVVANI-----------------------HL------------YNVLIHACC 211
           ++ +MV+ G+  N+                       HL            ++VLI A C
Sbjct: 269 LFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALC 328

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           K   V++ +  L  +  K V+ +   Y +LI   CK G    A  +  +M  EG  PD  
Sbjct: 329 KREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAH 388

Query: 272 TYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           +Y+SLI G CR+ ++ +A  +  D+  KG   + VTYT +ID   R    E   ++ + M
Sbjct: 389 SYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKM 448

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
            A G+ P +VTY   +R  C+EGR+ DA  ++ +M ++ + P+ VT NTLI  Y  +G  
Sbjct: 449 IATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLV 508

Query: 390 ASAMKVKNRMLEAG-------------------------------------LMLDQFT-- 410
           + A      M+  G                                     ++L+  T  
Sbjct: 509 SQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITER 568

Query: 411 --------YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEAL 462
                   Y   I   C+   ++ AK    GM +A  +PS   Y+ ++D  C        
Sbjct: 569 QLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIIDCCCRLKILTDA 628

Query: 463 LKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYA 522
           L LLD     G    +  YR +I   C+      A+ +F  +       D +++  L Y 
Sbjct: 629 LTLLDSMTKSGYLPHLESYRIIISSLCEGGNFRTAKEVFGDLLLKESNYDEIVWKILIYG 688

Query: 523 YWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDL 567
             + G     S +L  M       +  I    +      NE+ ++
Sbjct: 689 LLQKGSVAEFSSLLSVMKEHGYQPSNTINAMITGEITVTNEVQEI 733


>gi|357505881|ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498244|gb|AES79447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 770

 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 132/490 (26%), Positives = 236/490 (48%), Gaps = 22/490 (4%)

Query: 72  PNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSH 131
           PN   S  S  T+I  L K KH+    ++  K+A        + L+AL++   +    S 
Sbjct: 53  PNSIPSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSF 112

Query: 132 VLSWLVI-----FYANL--------KMTQDG-----LQVFDQMRVHNLMPHLHACTVLLN 173
               L +     F+ N+           Q G     + +F  M+ + L+P   +   ++N
Sbjct: 113 AFGVLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVIN 172

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
            L K +      +++K+M       N   ++ LI   CK+ DV++   LL EME   +  
Sbjct: 173 GLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEG 232

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           D+F Y+ LI+ +C KG       + + M R+ ++P++VTY+ L++  C++ + +EA ++ 
Sbjct: 233 DVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQML 292

Query: 294 RDIKG--ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
             + G    P+ V YT L DG  +     +A+++ ++M  +G  P  VTYN+I+  LCKE
Sbjct: 293 DTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKE 352

Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML--EAGLMLDQF 409
           GR+ DA  +L  M +K   PD VT +TL+   C +G    A+ + N ++  E  +  D F
Sbjct: 353 GRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVF 412

Query: 410 TYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEF 469
            +  +I   CK + +  AK + + M++ GF  +  +Y+ L+DGY +       L+L  + 
Sbjct: 413 AFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDA 472

Query: 470 VSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEP 529
           V  G+  + + Y  LI   CK + +  A+ LFN  + +G       Y +L  +  R    
Sbjct: 473 VDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSV 532

Query: 530 KACSDILDDM 539
           +   ++  +M
Sbjct: 533 EQARNLFQEM 542



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 122/489 (24%), Positives = 221/489 (45%), Gaps = 45/489 (9%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           NS   S L+  +      ++G  + ++M    L   +   + L++        +   +++
Sbjct: 198 NSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELF 257

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
            +M++  V  N+  Y+ L++A CK     +  ++L  M    VR D+  Y  L     K 
Sbjct: 258 NEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKN 317

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTY 306
           G   +A+ V D M + G  P+ VTYN++I+G C+EGR+ +A  +   +  KG  P+ VTY
Sbjct: 318 GRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTY 377

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKG--VYPGVVTYNSILRKLCKEGRIRDANRLLNEM 364
           +TL+ G C    ++EA+ L  ++ +K   + P V  +N ++++LCK+ R+R A R+   M
Sbjct: 378 STLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTM 437

Query: 365 NEKK-----------------------------------IAPDNVTCNTLINAYCKIGDT 389
            E+                                    I+P+  T   LIN  CK+   
Sbjct: 438 VERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQML 497

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
           + A  + N+   +G       Y  L+   C+   ++ A+ L   M +A   P   S++ +
Sbjct: 498 SIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNII 557

Query: 450 VDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGI 509
           +DG     + E+  +LL E ++  L  D   +  LI RF K  ++D A  L+  M   G 
Sbjct: 558 IDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYERMVSCGH 617

Query: 510 LGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSA---SYAKD---NE 563
           + D+V++ SL   Y   G+ +    +L  M  + +++  K+  +  A   + +KD    +
Sbjct: 618 VPDAVLFDSLLKGYSLKGKTEKVVSMLQQMADKDVVLDSKLTSTILACLCNMSKDVDIEK 677

Query: 564 ILDLFWSHV 572
           IL  F  H 
Sbjct: 678 ILPKFSQHT 686



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 99/394 (25%), Positives = 166/394 (42%), Gaps = 37/394 (9%)

Query: 160 NLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKV 219
           N +P   +C  L+++L K +  D V  V+ KM  + V       + LI +          
Sbjct: 54  NSIPSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIES---------- 103

Query: 220 EKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHG 279
                   F + +   F +  L  L  K+G H                 ++  +N L+ G
Sbjct: 104 --------FVNTQKPSFAFGVL-GLIMKRGFHL----------------NVYNFNLLLKG 138

Query: 280 FCREGRMREARRLFRDIKGA--TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPG 337
           FC+ G   +A  LF  +K     P+ V+Y T+I+G C+   L EA  L + M      P 
Sbjct: 139 FCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCKGKRLVEAKELFKEMKGGECKPN 198

Query: 338 VVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKN 397
            VT+++++   CK G + +   LL EM +  +  D    + LI+ +C  GD     ++ N
Sbjct: 199 SVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFN 258

Query: 398 RMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKN 457
            ML   +  +  TY  L++  CK ++   A ++L  M      P   +Y+ L DG     
Sbjct: 259 EMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNG 318

Query: 458 NEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYT 517
                +K+LD  V RG   +   Y A+I   CK+ +VD A  +   M   G   D V Y+
Sbjct: 319 RASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYS 378

Query: 518 SLAYAYWRAGEPKACSDILDDMYRRRLMITLKIY 551
           +L       G+     D+L+ +  +   I   ++
Sbjct: 379 TLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVF 412



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 71/274 (25%), Positives = 126/274 (45%)

Query: 293 FRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEG 352
            +D   + P++ +  TLID   +A   +  + +   MA+  V+P   + ++++       
Sbjct: 49  LQDYPNSIPSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQ 108

Query: 353 RIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYK 412
           +   A  +L  + ++    +    N L+  +C+ GD+  AM +   M    L+ D  +Y 
Sbjct: 109 KPSFAFGVLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYN 168

Query: 413 ALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSR 472
            +I+G CK K +  AKEL   M      P+  ++S L+DG+C   + E    LL+E    
Sbjct: 169 TVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKM 228

Query: 473 GLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKAC 532
           GL  DV VY ALI  FC K  ++  + LFN M    +  + V Y+ L  A  +  + K  
Sbjct: 229 GLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEA 288

Query: 533 SDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
           + +LD M   ++   +  Y   +   +K+    D
Sbjct: 289 AQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASD 322



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 59/243 (24%), Positives = 111/243 (45%), Gaps = 2/243 (0%)

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
           P+    TVL+N L K ++  +   ++ K    G    +  YN L+ + C+ S V++   L
Sbjct: 479 PNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNL 538

Query: 223 LCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR 282
             EM   +   D+ ++N +I    K G    A  +   M    + PD +T++ LI+ F +
Sbjct: 539 FQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINRFLK 598

Query: 283 EGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVT 340
            G++ EA  L+  +   G  P+ V + +L+ GY      E+ + + + MA K V      
Sbjct: 599 LGQLDEAASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQMADKDVVLDSKL 658

Query: 341 YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML 400
            ++IL  LC   +  D  ++L + ++      ++ CN L+    K+    + + V N  +
Sbjct: 659 TSTILACLCNMSKDVDIEKILPKFSQHTSVGASIKCNELLMKLNKVHPDNANILVANTAM 718

Query: 401 EAG 403
             G
Sbjct: 719 GTG 721


>gi|242069901|ref|XP_002450227.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
 gi|241936070|gb|EES09215.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
          Length = 894

 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 117/373 (31%), Positives = 189/373 (50%), Gaps = 2/373 (0%)

Query: 149 GLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIH 208
           GL +  +M +  +MP +     +++ L +      +  +  +M + G+  N+ +YN +I+
Sbjct: 330 GLLLLGEMEMKGIMPTVVTYGAIIHWLGRKSDLTKIESLLWEMKERGLSPNVQIYNTVIY 389

Query: 209 ACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISP 268
           A CK     +   +L +M       D+ T+NTLIA +C++G   EAL +     R  + P
Sbjct: 390 ALCKCRSASQALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVEEALKLLREAIRRELEP 449

Query: 269 DIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLR 326
           + ++Y  LIHGFC  G +  A  L  ++  +G TP+ VT   LI G   +  ++EAL +R
Sbjct: 450 NQLSYTPLIHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGALIHGLVVSGQVDEALMVR 509

Query: 327 EVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKI 386
           E MA + V P    YN ++  LCK+  +  A  LL EM E+K+ PD     TLI+ + + 
Sbjct: 510 EKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRS 569

Query: 387 GDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSY 446
              + A K+   M E G   D   Y A+I G+CK+  M+ A   +  M   G  P   +Y
Sbjct: 570 DKLSDARKIFEFMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTY 629

Query: 447 SWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQG 506
           + L+DGY  K + +A L+ L + + R    ++  Y +LI  +C     D A+ LF  MQ 
Sbjct: 630 TTLIDGYAKKGDIKAALRFLCDMMKRRCKPNIVTYASLICGYCNIGNTDSAEVLFASMQS 689

Query: 507 NGILGDSVIYTSL 519
            G+  + V YT L
Sbjct: 690 EGLFPNVVHYTVL 702



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 109/366 (29%), Positives = 173/366 (47%), Gaps = 2/366 (0%)

Query: 195 GVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEA 254
           G V     YNVLI   C+  DV +   LL EME K +   + TY  +I    +K    + 
Sbjct: 306 GCVPGAVFYNVLIDGYCRRGDVGRGLLLLGEMEMKGIMPTVVTYGAIIHWLGRKSDLTKI 365

Query: 255 LAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGA--TPNHVTYTTLIDG 312
            ++   M+  G+SP++  YN++I+  C+     +A  +   +  +   P+ VT+ TLI  
Sbjct: 366 ESLLWEMKERGLSPNVQIYNTVIYALCKCRSASQALAVLNQMVASRFDPDVVTFNTLIAA 425

Query: 313 YCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPD 372
           +CR  D+EEAL+L      + + P  ++Y  ++   C  G +  A+ LL EM  +   PD
Sbjct: 426 FCREGDVEEALKLLREAIRRELEPNQLSYTPLIHGFCVRGEVMVASDLLVEMIGRGHTPD 485

Query: 373 NVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLF 432
            VT   LI+     G    A+ V+ +M E  +M D   Y  LI G CK + +  AK LL 
Sbjct: 486 VVTLGALIHGLVVSGQVDEALMVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLV 545

Query: 433 GMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKE 492
            ML+    P    Y+ L+DG+   +      K+ +    +G   D+  Y A+I+ +CK  
Sbjct: 546 EMLEQKVQPDKFVYTTLIDGFIRSDKLSDARKIFEFMEEKGGYRDIVAYNAMIKGYCKSG 605

Query: 493 KVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYR 552
            ++ A    + M+  G + D   YT+L   Y + G+ KA    L DM +RR    +  Y 
Sbjct: 606 MMNEAVMCMSSMRKVGCIPDEFTYTTLIDGYAKKGDIKAALRFLCDMMKRRCKPNIVTYA 665

Query: 553 SFSASY 558
           S    Y
Sbjct: 666 SLICGY 671



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 115/461 (24%), Positives = 190/461 (41%), Gaps = 60/461 (13%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N  + + ++      +     L V +QM      P +     L+ +  ++   +   K+ 
Sbjct: 380 NVQIYNTVIYALCKCRSASQALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVEEALKLL 439

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
           ++ ++  +  N   Y  LIH  C   +V     LL EM  +    D+ T   LI      
Sbjct: 440 REAIRRELEPNQLSYTPLIHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGALIHGLVVS 499

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTY 306
           G   EAL V+++M    + PD   YN LI G C++  +  A+ L  ++  +   P+   Y
Sbjct: 500 GQVDEALMVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQPDKFVY 559

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
           TTLIDG+ R++ L +A ++ E M  KG Y  +V YN++++  CK G + +A   ++ M +
Sbjct: 560 TTLIDGFIRSDKLSDARKIFEFMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMCMSSMRK 619

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
               PD  T  TLI+ Y K GD  +A++    M++     +  TY +LI G+C     D 
Sbjct: 620 VGCIPDEFTYTTLIDGYAKKGDIKAALRFLCDMMKRRCKPNIVTYASLICGYCNIGNTDS 679

Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDG--------------------YCNKNN-------- 458
           A+ L   M   G  P+   Y+ L+                      +C+ N+        
Sbjct: 680 AEVLFASMQSEGLFPNVVHYTVLIGSLFKKDKAIQAAAYFEHMLLNHCSPNDATMHYLVN 739

Query: 459 ----------------------EEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDY 496
                                 + ALL +    +S GL   +S Y A+I   C+   +  
Sbjct: 740 GLTNCRYGMINSNCSDTDQAHKKSALLDVFKGLISDGLDPRISAYNAIIFSLCRHNMLGK 799

Query: 497 AQRLFNLMQGNGILGDSVIYTSLAYAY--------WRAGEP 529
           A  L   M   G L D V + SL Y +        WR+  P
Sbjct: 800 AMELKEKMSNKGCLPDPVTFLSLLYGFSSVGKSGKWRSALP 840



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 103/354 (29%), Positives = 153/354 (43%), Gaps = 42/354 (11%)

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF--RDIKGATPNH 303
           C + ++ E LA     +REG + D  T   ++ G C EGR+ E RRL   R  +G  P  
Sbjct: 257 CARRLYGEMLA----RDREGGADDYSTC-VMVRGLCLEGRVEEGRRLIEARWGEGCVPGA 311

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTY---------------------- 341
           V Y  LIDGYCR  D+   L L   M  KG+ P VVTY                      
Sbjct: 312 VFYNVLIDGYCRRGDVGRGLLLLGEMEMKGIMPTVVTYGAIIHWLGRKSDLTKIESLLWE 371

Query: 342 -------------NSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
                        N+++  LCK      A  +LN+M   +  PD VT NTLI A+C+ GD
Sbjct: 372 MKERGLSPNVQIYNTVIYALCKCRSASQALAVLNQMVASRFDPDVVTFNTLIAAFCREGD 431

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
              A+K+    +   L  +Q +Y  LIHGFC   E+ +A +LL  M+  G +P   +   
Sbjct: 432 VEEALKLLREAIRRELEPNQLSYTPLIHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGA 491

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG 508
           L+ G       +  L + ++   R +  D ++Y  LI   CKK  +  A+ L   M    
Sbjct: 492 LIHGLVVSGQVDEALMVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQK 551

Query: 509 ILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDN 562
           +  D  +YT+L   + R+ +      I + M  +     +  Y +    Y K  
Sbjct: 552 VQPDKFVYTTLIDGFIRSDKLSDARKIFEFMEEKGGYRDIVAYNAMIKGYCKSG 605



 Score = 40.0 bits (92), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 45/244 (18%), Positives = 85/244 (34%), Gaps = 42/244 (17%)

Query: 361 LNEMNEKKIA------------------------------------PDNVTCNTLINAYC 384
           L  M+   +                                     PD   CN L+    
Sbjct: 191 LRSMSLAGVTPTRGSLGALAAAYADAGMEAKAAEACARARDLHGALPDAPHCNRLLRLLV 250

Query: 385 KIGDTASAMKVKNRML----EAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFS 440
                  A ++   ML    E G   D ++   ++ G C    ++  + L+      G  
Sbjct: 251 DRRRWECARRLYGEMLARDREGG--ADDYSTCVMVRGLCLEGRVEEGRRLIEARWGEGCV 308

Query: 441 PSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRL 500
           P    Y+ L+DGYC + +    L LL E   +G+   V  Y A+I    +K  +   + L
Sbjct: 309 PGAVFYNVLIDGYCRRGDVGRGLLLLGEMEMKGIMPTVVTYGAIIHWLGRKSDLTKIESL 368

Query: 501 FNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAK 560
              M+  G+  +  IY ++ YA  +         +L+ M   R    +  + +  A++ +
Sbjct: 369 LWEMKERGLSPNVQIYNTVIYALCKCRSASQALAVLNQMVASRFDPDVVTFNTLIAAFCR 428

Query: 561 DNEI 564
           + ++
Sbjct: 429 EGDV 432


>gi|255541126|ref|XP_002511627.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548807|gb|EEF50296.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1163

 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 139/496 (28%), Positives = 224/496 (45%), Gaps = 65/496 (13%)

Query: 57  PSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVL 116
           PS +  FF WA      + H+ QS++ M+ IL + ++   A+N L  I  R         
Sbjct: 99  PSKALQFFNWAPEL--GFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRRS-------- 148

Query: 117 NALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLA 176
           N  VK+ D         + L+  Y    + Q+ +QVF+ M+   + P +     LL  L 
Sbjct: 149 NGTVKLED------RFFNSLIRSYGKAGLFQESVQVFNSMKSVGVSPSVVTFNSLLLILL 202

Query: 177 KDRLTDMVWKVYKKMVQL-GVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADL 235
           K   T+M   V+ +M+   GV  + + +N+LI   CK+S VD+  +   EM       DL
Sbjct: 203 KRGRTNMAQSVFDEMLSTYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFKCDPDL 262

Query: 236 FTYNTLIALYCKKGMHYEALAVQDRMEREG--ISPDIVTYNSLIHGFCREGRMREARRLF 293
            TYNTL+   C+ G    A  V + M ++   ++PD+VTY +L+ G+C +  + EA  +F
Sbjct: 263 VTYNTLVDGLCRAGKVNIAHNVVNGMVKKSTNLNPDVVTYTTLVRGYCMKHEIDEALVVF 322

Query: 294 RDI--KGATPNHVTYTTLIDG------------------------------------YCR 315
            ++  KG  PN +TY TLI G                                    +C 
Sbjct: 323 EEMVSKGLKPNEITYNTLIKGLCEVQKIDKIKQIFEGALGGGGFIPDTCTLNTLMNAHCN 382

Query: 316 ANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVT 375
           A +L +AL + E M    V P   TY+ ++R LC+ G    A +L +E++EK+I   +  
Sbjct: 383 AGNLNDALEVFEKMMVLNVRPDSATYSVLIRNLCQRGNFERAEQLFDELSEKEILLRDDG 442

Query: 376 CNTLINAY-------CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAK 428
           C  L+ AY       C+ G TA A +V  ++++ G   D  ++K LI G C+    +   
Sbjct: 443 CTPLVAAYKSMFEFLCRNGKTAKAERVFRQLMKRGTQ-DPLSFKILIKGHCREGTFEAGY 501

Query: 429 ELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRF 488
           ELL  ML   F P   +Y  L+DG   K       + L++ +      + S + +++ R 
Sbjct: 502 ELLVLMLRRDFVPDLETYQSLIDGLLQKGEPLVAYQTLEKMIKSSHVPETSTFHSILARL 561

Query: 489 CKKEKVDYAQRLFNLM 504
             K     + R   LM
Sbjct: 562 LAKGCAHESARFIMLM 577



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 97/340 (28%), Positives = 179/340 (52%), Gaps = 9/340 (2%)

Query: 193 QLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKD---VRADLFTYNTLIALYCKKG 249
           +LG   N   Y +++    ++ +++     L  ++ +    V+ +   +N+LI  Y K G
Sbjct: 111 ELGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRRSNGTVKLEDRFFNSLIRSYGKAG 170

Query: 250 MHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI---KGATPNHVTY 306
           +  E++ V + M+  G+SP +VT+NSL+    + GR   A+ +F ++    G TP+  T+
Sbjct: 171 LFQESVQVFNSMKSVGVSPSVVTFNSLLLILLKRGRTNMAQSVFDEMLSTYGVTPDTYTF 230

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
             LI G+C+ + ++E  R  + M+     P +VTYN+++  LC+ G++  A+ ++N M +
Sbjct: 231 NILIRGFCKNSMVDEGFRFFKEMSRFKCDPDLVTYNTLVDGLCRAGKVNIAHNVVNGMVK 290

Query: 367 KK--IAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEM 424
           K   + PD VT  TL+  YC   +   A+ V   M+  GL  ++ TY  LI G C+ +++
Sbjct: 291 KSTNLNPDVVTYTTLVRGYCMKHEIDEALVVFEEMVSKGLKPNEITYNTLIKGLCEVQKI 350

Query: 425 DIAKELLFGMLDAG-FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRA 483
           D  K++  G L  G F P  C+ + L++ +CN  N    L++ ++ +   +  D + Y  
Sbjct: 351 DKIKQIFEGALGGGGFIPDTCTLNTLMNAHCNAGNLNDALEVFEKMMVLNVRPDSATYSV 410

Query: 484 LIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAY 523
           LIR  C++   + A++LF+ +    IL      T L  AY
Sbjct: 411 LIRNLCQRGNFERAEQLFDELSEKEILLRDDGCTPLVAAY 450



 Score =  118 bits (295), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 71/238 (29%), Positives = 120/238 (50%), Gaps = 4/238 (1%)

Query: 306 YTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM- 364
           + +LI  Y +A   +E++++   M + GV P VVT+NS+L  L K GR   A  + +EM 
Sbjct: 159 FNSLIRSYGKAGLFQESVQVFNSMKSVGVSPSVVTFNSLLLILLKRGRTNMAQSVFDEML 218

Query: 365 NEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEM 424
           +   + PD  T N LI  +CK        +    M       D  TY  L+ G C+A ++
Sbjct: 219 STYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFKCDPDLVTYNTLVDGLCRAGKV 278

Query: 425 DIAKELLFGML--DAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYR 482
           +IA  ++ GM+      +P   +Y+ LV GYC K+  +  L + +E VS+GL  +   Y 
Sbjct: 279 NIAHNVVNGMVKKSTNLNPDVVTYTTLVRGYCMKHEIDEALVVFEEMVSKGLKPNEITYN 338

Query: 483 ALIRRFCKKEKVDYAQRLF-NLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
            LI+  C+ +K+D  +++F   + G G + D+    +L  A+  AG      ++ + M
Sbjct: 339 TLIKGLCEVQKIDKIKQIFEGALGGGGFIPDTCTLNTLMNAHCNAGNLNDALEVFEKM 396



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 90/405 (22%), Positives = 166/405 (40%), Gaps = 49/405 (12%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           +V+N +VK   + + +    + LV  Y       + L VF++M    L P+      L+ 
Sbjct: 283 NVVNGMVKKSTNLNPDVVTYTTLVRGYCMKHEIDEALVVFEEMVSKGLKPNEITYNTLIK 342

Query: 174 SLAKDRLTDMVWKVYKKMVQLG-VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVR 232
            L + +  D + ++++  +  G  + +    N L++A C + +++   ++  +M   +VR
Sbjct: 343 GLCEVQKIDKIKQIFEGALGGGGFIPDTCTLNTLMNAHCNAGNLNDALEVFEKMMVLNVR 402

Query: 233 ADLFTYNTLIALYCKKGMHYEALAVQDRM-ERE------GISPDIVTYNSLIHGFCREGR 285
            D  TY+ LI   C++G    A  + D + E+E      G +P +  Y S+    CR G+
Sbjct: 403 PDSATYSVLIRNLCQRGNFERAEQLFDELSEKEILLRDDGCTPLVAAYKSMFEFLCRNGK 462

Query: 286 MREARRLFRD---------------IKGA---------------------TPNHVTYTTL 309
             +A R+FR                IKG                       P+  TY +L
Sbjct: 463 TAKAERVFRQLMKRGTQDPLSFKILIKGHCREGTFEAGYELLVLMLRRDFVPDLETYQSL 522

Query: 310 IDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI 369
           IDG  +  +   A +  E M      P   T++SIL +L  +G   ++ R +  M E KI
Sbjct: 523 IDGLLQKGEPLVAYQTLEKMIKSSHVPETSTFHSILARLLAKGCAHESARFIMLMLEGKI 582

Query: 370 APD-NVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAK 428
             + N++ +T +      G    A K+   +   G ++D    + LI      ++  +A 
Sbjct: 583 RQNINLSTHT-VRLLFGSGLRDKAFKIVGLLYANGYVVDM---EELIGFLSHNRKFLLAH 638

Query: 429 ELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
           +LL   L+   +        +++G C          L  E V +G
Sbjct: 639 KLLLFCLEKHQNVDIDMCDTVIEGLCKMKRHSEAFGLYYELVEKG 683



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 44/181 (24%), Positives = 77/181 (42%), Gaps = 6/181 (3%)

Query: 407 DQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLL 466
           D+F + +LI  + KA     + ++   M   G SPS  +++ L+     +        + 
Sbjct: 156 DRF-FNSLIRSYGKAGLFQESVQVFNSMKSVGVSPSVVTFNSLLLILLKRGRTNMAQSVF 214

Query: 467 DEFVSR-GLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWR 525
           DE +S  G+  D   +  LIR FCK   VD   R F  M       D V Y +L     R
Sbjct: 215 DEMLSTYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFKCDPDLVTYNTLVDGLCR 274

Query: 526 AGEPKACSDILDDMYRRRLMITLKI--YRSFSASYAKDNEILD--LFWSHVVDRGLMSKH 581
           AG+     ++++ M ++   +   +  Y +    Y   +EI +  + +  +V +GL    
Sbjct: 275 AGKVNIAHNVVNGMVKKSTNLNPDVVTYTTLVRGYCMKHEIDEALVVFEEMVSKGLKPNE 334

Query: 582 I 582
           I
Sbjct: 335 I 335


>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
 gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
          Length = 814

 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 140/528 (26%), Positives = 241/528 (45%), Gaps = 33/528 (6%)

Query: 11  TKFIKTISAIMLKGH-WA-----KLLNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFF 64
           T  ++TI  + L G  W+      +L P +   +  + +  VL +L     +   + +FF
Sbjct: 52  TSIVETIKDVRLDGSSWSVHNIRNVLGP-VHGQVLGSHVAAVLRSL----KVTGTAISFF 106

Query: 65  KWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHD 124
           +WA      ++H + ++  ++++L   K++     + E+               ++K   
Sbjct: 107 RWAGEQA-GFQHDVFTYNCLMNLLVAEKNYSQCYAIHEE---------------MLKAGI 150

Query: 125 DPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMV 184
            P  N+   + L+  +A  +   D +  F+ M+     P LH   +L++ L K  + +  
Sbjct: 151 AP--NTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKA 208

Query: 185 WKVYKKMVQLGVVA-NIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIA 243
           ++V+ +M+ +G V  +  L+  ++    K+  V +  ++  +ME      D   YNT+I 
Sbjct: 209 FEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMID 268

Query: 244 LYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATP 301
              K G   EAL V D M  +   P  VTY  L++  C+ G +  A  LFR +   G  P
Sbjct: 269 GLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRP 328

Query: 302 NHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLL 361
           N V YT+LI G+ ++  ++EA  L + M   G  P V+T+  ++  LCK G    A +  
Sbjct: 329 NSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSF 388

Query: 362 NEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKA 421
            EM      P+ VT  T+I    KIG  A+A ++   M+  G   D  TY  L+ GFCK 
Sbjct: 389 EEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKL 448

Query: 422 KEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNN-EEALLKLLDEFVSRGLCVDVSV 480
             +D A +LL  +     SP+   YS LV G C+  + E  L  L ++  +    +D  +
Sbjct: 449 GRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGL 508

Query: 481 YRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
             ++I   CK  ++D A R+F  M   G   D+  Y  L     R+ E
Sbjct: 509 CCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRE 556



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 131/481 (27%), Positives = 213/481 (44%), Gaps = 26/481 (5%)

Query: 81  HWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFY 140
           H  M+  L K K  K A+ +  ++    F       N ++      DG            
Sbjct: 228 HTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMI------DG-----------L 270

Query: 141 ANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANI 200
           A     Q+ L+V D M     +P      +L+NSL K    +   ++++ M   G   N 
Sbjct: 271 AKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNS 330

Query: 201 HLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDR 260
            +Y  LIH   KS  + +   L  EM     R D+ T+  +I   CK G   +A    + 
Sbjct: 331 VIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEE 390

Query: 261 MEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRAND 318
           M R G  P++VTY ++I G  + GR+  A R+ + +   G  P+ VTY  L+DG+C+   
Sbjct: 391 MMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGR 450

Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVT--- 375
           L+EA +L + +      P +  Y+S+++ LC  G +   N L +   + K A +N+    
Sbjct: 451 LDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVE--NTLDDLFEQSKAAAENLDPGL 508

Query: 376 CNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE--MDIAKELLFG 433
           C ++I   CK G    A ++  RM+  G   D  TY  LI+G C+++E  ++ A  LL  
Sbjct: 509 CCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHD 568

Query: 434 MLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEK 493
           +   G+ P   +Y+ L  G C     +  +K+L+E  SRG   DV  Y AL    C + +
Sbjct: 569 LEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQ 628

Query: 494 VDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRS 553
           VD A  LF  M   G   D+  Y  +     +  + +      D+M  +    T+  Y +
Sbjct: 629 VDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTA 688

Query: 554 F 554
            
Sbjct: 689 L 689



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 129/484 (26%), Positives = 211/484 (43%), Gaps = 24/484 (4%)

Query: 83  TMIHILTKNKHFKSA----QNMLEKIALRDFLSTPSVLNALVKIHDDPDG---------- 128
           TMI  L K  H + A     NML K  +   ++   ++N+L K                 
Sbjct: 265 TMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAAS 324

Query: 129 ----NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMV 184
               NS + + L+  +A     ++   +FD+M      P +   TV+++ L K    +  
Sbjct: 325 GFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQA 384

Query: 185 WKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIAL 244
            K +++M++ G   N+  Y  +I    K   V    +++  M       D  TY  L+  
Sbjct: 385 AKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDG 444

Query: 245 YCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA-RRLFRDIKGATPN- 302
           +CK G   EA  + D +++   SP++  Y+SL+ G C  G +      LF   K A  N 
Sbjct: 445 FCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENL 504

Query: 303 -HVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK--EGRIRDANR 359
                 ++I G C+   L+EA R+ + M ++G  P   TYN ++  LC+  E R+  A  
Sbjct: 505 DPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFA 564

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
           LL+++      PD VT   L    CKIG+   A+K+       G   D   Y AL  G C
Sbjct: 565 LLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLC 624

Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
              ++D A  L   M+  G +P   +Y  +++G       E   K  DE + +G    V+
Sbjct: 625 YQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVA 684

Query: 480 VYRALIRRFCKKEKVDYAQRLFNLMQGNG-ILGDSVIYTSLAYAYWRAGEPKACSDILDD 538
            Y AL++  C    VD A   F  M   G ++G  +IY +L + + +A +  A   + +D
Sbjct: 685 TYTALVQALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFED 744

Query: 539 MYRR 542
           M  R
Sbjct: 745 MISR 748



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 119/466 (25%), Positives = 196/466 (42%), Gaps = 25/466 (5%)

Query: 60  SCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNAL 119
           +C+ F   E     Y+  + +H  MI  L K+ +F+ A    E++ +R     P+V+   
Sbjct: 349 ACSLFD--EMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEM-MRGGCK-PNVVT-- 402

Query: 120 VKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDR 179
                         + ++   + +    +  ++   M  H   P       LL+   K  
Sbjct: 403 -------------YTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLG 449

Query: 180 LTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDK-VEKLLCEMEFKDVRADLFTY 238
             D   ++  ++ +     N+ LY+ L+   C    V+  ++ L  + +      D    
Sbjct: 450 RLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLC 509

Query: 239 NTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR--EGRMREARRLFRDI 296
            ++I   CK G   EA  +  RM  EG  PD  TYN LI+G CR  E R+  A  L  D+
Sbjct: 510 CSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDL 569

Query: 297 K--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRI 354
           +  G  P+ VTYT L  G C+  +++ A+++ E  +++G    VV Y ++   LC +G++
Sbjct: 570 EMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQV 629

Query: 355 RDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKAL 414
             A  L  EM  +  APD      +IN   K      A K  + M+  G      TY AL
Sbjct: 630 DRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTAL 689

Query: 415 IHGFCKAKEMDIAKELLFGMLDAG-FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
           +   C A  +D A     GML  G    S   Y  L+ G+C     +A LKL ++ +SRG
Sbjct: 690 VQALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRG 749

Query: 474 LCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
                    +L     +  K + AQ L   M   G    +  +T++
Sbjct: 750 NVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAI 795



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 96/383 (25%), Positives = 175/383 (45%), Gaps = 7/383 (1%)

Query: 193 QLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHY 252
           Q G   ++  YN L++      +  +   +  EM    +  + F++N LI  + +     
Sbjct: 112 QAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRAD 171

Query: 253 EALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKG---ATPNHVTYTTL 309
           +A+   + M+R+   PD+ T+  L+   C+ G   +A  +F ++       P+   +T +
Sbjct: 172 DAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAM 231

Query: 310 IDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI 369
           +    +A  ++EA  +   M   G  P  + YN+++  L K G  ++A ++L+ M  K  
Sbjct: 232 VRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKAC 291

Query: 370 APDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKE 429
            P  VT   L+N+ CK G    A ++   M  +G   +   Y +LIHGF K+  M  A  
Sbjct: 292 VPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACS 351

Query: 430 LLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFC 489
           L   M++AG+ P   +++ ++DG C   N E   K  +E +  G   +V  Y  +I+   
Sbjct: 352 LFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLS 411

Query: 490 KKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLK 549
           K  +V  A R+   M  +G   DSV Y  L   + + G     + +LD++ +      L+
Sbjct: 412 KIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQ 471

Query: 550 IYRSFSASY----AKDNEILDLF 568
           +Y S         + +N + DLF
Sbjct: 472 LYSSLVKGLCDGGSVENTLDDLF 494



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 158/324 (48%), Gaps = 9/324 (2%)

Query: 152 VFDQMRV--HNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           +F+Q +    NL P L  C  ++  L K    D   +++++MV  G   +   YN+LI+ 
Sbjct: 493 LFEQSKAAAENLDPGL--CCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILING 550

Query: 210 CCKSSD--VDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
            C+S +  V++   LL ++E      D  TY  L    CK G    A+ + +     G +
Sbjct: 551 LCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWN 610

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
            D+V Y +L  G C +G++  A  LF+++  +G  P+   Y  +I+G  +   LE+A + 
Sbjct: 611 ADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKF 670

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDA-NRLLNEMNEKKIAPDNVTCNTLINAYC 384
            + M  KG  P V TY ++++ LC  G + +A +R    +   ++    +  + LI+ +C
Sbjct: 671 FDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFC 730

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           K     +A+K+   M+  G +    T  +L  G  ++ + + A+ELL  M   G  P   
Sbjct: 731 KALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAA 790

Query: 445 SYSWLVDGYCNKNNEEALLKLLDE 468
           +++ ++DG    +    LLKL+ E
Sbjct: 791 TFTAILDGLRKSDESGKLLKLVQE 814


>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 118/429 (27%), Positives = 200/429 (46%), Gaps = 7/429 (1%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           Q+   +   +  ++  P+    T L+    ++   D+ + ++ +MV+ G   N   Y+ L
Sbjct: 219 QEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTL 278

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           I+  C    +++   +L EM  K +   ++TY   +   C  G   EA+ +  +M++ G 
Sbjct: 279 INGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGC 338

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
            P+I T+ +LI G  R+G+   A  L+  +   G  P  VTY  LI+  C     E A  
Sbjct: 339 VPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFT 398

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           + + M + G  P   TYN I++  C  G I+ A  + ++M +   +P+ +T NTLI  YC
Sbjct: 399 IFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYC 458

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           K G+  +AM++   M   GL  D +TY  LI GF +  +++ A  L +GM++ G SP++ 
Sbjct: 459 KQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHV 518

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
           +Y+ ++DGY N    +  L L  + V  G       Y  +I  F K   +  A+     M
Sbjct: 519 TYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKM 578

Query: 505 QGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSF-----SASYA 559
              G+L + + YTS      R G       I  +M +R     L  Y S          A
Sbjct: 579 VKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRA 638

Query: 560 KDNEILDLF 568
           +D E+ +L 
Sbjct: 639 EDAEMYNLL 647



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 122/451 (27%), Positives = 196/451 (43%), Gaps = 44/451 (9%)

Query: 145 MTQDG-----LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
           +++DG     + ++ +M    L+P       L+N L  +   +  + ++K M+  G + +
Sbjct: 352 LSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPS 411

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
              YN +I   C   D+ K   +  +M       ++ TYNTLI  YCK+G    A+ + +
Sbjct: 412 TQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLE 471

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGY---- 313
            M+  G+ PD  TY  LI GF R G++  A  LF  +   G +PNHVTYT +IDGY    
Sbjct: 472 IMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLA 531

Query: 314 -------------------------------CRANDLEEALRLREVMAAKGVYPGVVTYN 342
                                           + N + EA      M  +G+ P V+TY 
Sbjct: 532 KVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYT 591

Query: 343 SILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG--DTASAMKVKNRML 400
           S +  LC+ GR   A ++ +EM ++   P+  T ++LI   C+ G  + A    +  R+ 
Sbjct: 592 SFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLT 651

Query: 401 EAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEE 460
             G   +  TY  L+ G C       A +L+  M   G  PS   Y  L+ G C     E
Sbjct: 652 HYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVE 711

Query: 461 ALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLA 520
           + L +     + G  + +S Y+ALI   CK+  ++ AQ +F  M       D V++T L 
Sbjct: 712 SALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVVWTVLL 771

Query: 521 YAYWRAGEPKACSDILDDMYRRRLMITLKIY 551
               + GE   C  +L  M  R   +  + Y
Sbjct: 772 DGLLKEGETDLCLKLLHVMESRNCTLNFQTY 802



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 115/455 (25%), Positives = 215/455 (47%), Gaps = 19/455 (4%)

Query: 75  KHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLS 134
           + SL +  TMI+IL K    + A+ ++  I   D         +L+  H      +H   
Sbjct: 199 RPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGH----CRNH--- 251

Query: 135 WLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQL 194
                  NL +      +FD+M      P+    + L+N L  +   +    + ++MVQ 
Sbjct: 252 -------NLDL---AFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQK 301

Query: 195 GVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEA 254
           G+   ++ Y + + + C +    +  +LL +M+ +    ++ T+  LI+   + G    A
Sbjct: 302 GIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIA 361

Query: 255 LAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDG 312
           + +  +M  +G+ P  VTYN+LI+  C EGR   A  +F+ +   G+ P+  TY  +I  
Sbjct: 362 IGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKC 421

Query: 313 YCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPD 372
           +C   D+++A+ + + M   G  P V+TYN+++   CK+G + +A RLL  M    + PD
Sbjct: 422 FCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPD 481

Query: 373 NVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLF 432
             T   LI+ + + G    A  +   M+E G+  +  TY A+I G+    ++D A  L +
Sbjct: 482 AWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFW 541

Query: 433 GMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKE 492
            M+++G  PS  +Y+ ++ G+   N+         + V +GL  +V  Y + I   C+  
Sbjct: 542 KMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNG 601

Query: 493 KVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
           +   A ++F+ M+      +   Y+SL Y   + G
Sbjct: 602 RTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEG 636



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 102/404 (25%), Positives = 183/404 (45%), Gaps = 13/404 (3%)

Query: 115 VLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQ--DGLQVFDQMRVHNLMPHLHACTVLL 172
           + + ++K    P+    V+++  + Y   K     + +++ + M+ + L P     T L+
Sbjct: 434 IFDKMLKAGSSPN----VITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELI 489

Query: 173 NSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVR 232
           +  ++    +    ++  M++ G+  N   Y  +I      + VD    L  +M      
Sbjct: 490 SGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNL 549

Query: 233 ADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRL 292
               TYN +I+ + K     EA     +M ++G+ P+++TY S I G CR GR   A ++
Sbjct: 550 PSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKI 609

Query: 293 FRDI--KGATPNHVTYTTLIDGYCRANDLEEA--LRLREVMAAKGVYPGVVTYNSILRKL 348
           F ++  +   PN  TY++LI G C+    E+A    L   +   G  P V TY ++++ L
Sbjct: 610 FHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGL 669

Query: 349 CKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ 408
           C EGR  +A++L+  M +K + P       L+   CK     SA+ +   M   G  L  
Sbjct: 670 CGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHL 729

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
             YKALI   CK   ++ A+ +   ML+  ++     ++ L+DG   +   +  LKLL  
Sbjct: 730 SDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVVWTVLLDGLLKEGETDLCLKLLHV 789

Query: 469 FVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGD 512
             SR   ++   Y  L R       +D A ++  + Q  GI+ D
Sbjct: 790 MESRNCTLNFQTYVMLAREL---SALDCAIKIPQISQQLGIVKD 830


>gi|357499719|ref|XP_003620148.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|217074978|gb|ACJ85849.1| unknown [Medicago truncatula]
 gi|355495163|gb|AES76366.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 465

 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 114/397 (28%), Positives = 196/397 (49%), Gaps = 6/397 (1%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D + +F+ +   N  P       +L SL K +    V  + KKM   G+  N+   N+LI
Sbjct: 70  DAVSLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHTVLYLSKKMEFRGIKPNLVNCNILI 129

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           +  C+   +     +  ++       +  T+ TLI   C KG  ++AL   D++   G  
Sbjct: 130 NCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVALGFQ 189

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDIKG--ATPNHVTYTTLIDGYCRANDLEEALRL 325
            + ++Y +LI G C+ G  R A  L R + G    PN V Y+T+IDG C+   + +A  L
Sbjct: 190 FNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFDL 249

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
              M +KG+ P VVTY++++      G+++DA  L N+M  + I PD  T N L++ +CK
Sbjct: 250 YSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCK 309

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            G  + A+K+ + M + G   +  TY +++   CK   +D A  LL  + D G  P+  +
Sbjct: 310 SGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNMHT 369

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+ L+DG C     E    + ++ + +G  + V  Y  +   FCKK   D A  L + M+
Sbjct: 370 YTILIDGLCTSGKLEDARNIFEDLLVKGYDITVVTYIVMFYGFCKKGLFDEASALLSKME 429

Query: 506 GNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRR 542
            NG + D+  Y  +  + ++ GE    +D+ + ++R 
Sbjct: 430 ENGCIPDAKTYELIKLSLFKKGE----NDMAEKLHRE 462



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 100/364 (27%), Positives = 167/364 (45%), Gaps = 19/364 (5%)

Query: 88  LTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQ 147
           L K+KH+ +   + +K+  R     P+++N                + L+  +  L +  
Sbjct: 97  LVKSKHYHTVLYLSKKMEFRGI--KPNLVNC---------------NILINCFCQLGLIP 139

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
               VF ++      P+    T L+  L            + K+V LG   N   Y  LI
Sbjct: 140 FAFSVFAKILKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVALGFQFNQISYGTLI 199

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
              CK  +      LL  ++ K V+ ++  Y+T+I   CK     +A  +   M  +GIS
Sbjct: 200 DGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGIS 259

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
           P++VTY++LI GF   G++++A  LF  +  +   P+  T+  L+D +C++  +  AL+L
Sbjct: 260 PNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKISYALKL 319

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
            + M  +G  P +VTY+SIL  LCK  R+  A  LL ++ ++ I P+  T   LI+  C 
Sbjct: 320 VDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCT 379

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            G    A  +   +L  G  +   TY  + +GFCK    D A  LL  M + G  P   +
Sbjct: 380 SGKLEDARNIFEDLLVKGYDITVVTYIVMFYGFCKKGLFDEASALLSKMEENGCIPDAKT 439

Query: 446 YSWL 449
           Y  +
Sbjct: 440 YELI 443



 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 80/324 (24%), Positives = 139/324 (42%), Gaps = 13/324 (4%)

Query: 269 DIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLR 326
           +++ Y+S    F     + +A  LF  +  +  TP  + +  ++    ++      L L 
Sbjct: 51  NLIPYSSTSTTFHSNNDVDDAVSLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHTVLYLS 110

Query: 327 EVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKI 386
           + M  +G+ P +V  N ++   C+ G I  A  +  ++ +    P+ +T  TLI   C  
Sbjct: 111 KKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLK 170

Query: 387 GDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSY 446
           G    A+   ++++  G   +Q +Y  LI G CK  E   A +LL  +      P+   Y
Sbjct: 171 GQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMY 230

Query: 447 SWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQG 506
           S ++DG C   +      L  E VS+G+  +V  Y ALI  F    K+  A  LFN M  
Sbjct: 231 STIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMIS 290

Query: 507 NGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
             I  D   +  L   + ++G+      ++D+M+ R     +  Y S          ILD
Sbjct: 291 ENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSS----------ILD 340

Query: 567 -LFWSHVVDRGLMSKHIFKEMQLR 589
            L  +H VD+ +      K+  +R
Sbjct: 341 ALCKTHRVDKAVALLTKLKDQGIR 364



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 88/377 (23%), Positives = 170/377 (45%), Gaps = 28/377 (7%)

Query: 12  KFIKTISAIMLKGHWAKLLNPNIASSLTSTAIHKVLLN---LYNC-CHIPSLSCAFFKWA 67
           +F K + +++   H+  +L   ++  +    I   L+N   L NC C +  +  AF  +A
Sbjct: 89  EFNKILGSLVKSKHYHTVLY--LSKKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFA 146

Query: 68  ESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDF----LSTPSVLNALVKIH 123
           +     Y  +  +  T+I  L        A N  +K+    F    +S  ++++ L K+ 
Sbjct: 147 KILKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVG 206

Query: 124 DDPDG-------NSHVLSWLVIFYANL-------KMTQDGLQVFDQMRVHNLMPHLHACT 169
           +           +  ++   V+ Y+ +       K   D   ++ +M    + P++   +
Sbjct: 207 ETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYS 266

Query: 170 VLLNSL-AKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEF 228
            L++      +L D V  ++ KM+   +  +++ +N+L+   CKS  +    KL+ EM  
Sbjct: 267 ALISGFFTVGKLKDAV-DLFNKMISENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHD 325

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
           +    ++ TY++++   CK     +A+A+  +++ +GI P++ TY  LI G C  G++ +
Sbjct: 326 RGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLED 385

Query: 289 ARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILR 346
           AR +F D  +KG     VTY  +  G+C+    +EA  L   M   G  P   TY  I  
Sbjct: 386 ARNIFEDLLVKGYDITVVTYIVMFYGFCKKGLFDEASALLSKMEENGCIPDAKTYELIKL 445

Query: 347 KLCKEGRIRDANRLLNE 363
            L K+G    A +L  E
Sbjct: 446 SLFKKGENDMAEKLHRE 462


>gi|186478651|ref|NP_173362.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806505|sp|Q9LN69.2|PPR50_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g19290
 gi|332191705|gb|AEE29826.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 904

 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 146/565 (25%), Positives = 278/565 (49%), Gaps = 19/565 (3%)

Query: 12  KFIKTISAIMLKGHWAKL--LNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAES 69
           + ++ +S +++ G +  L  L+ + +  L ++ + ++ LN   C  I +L+    K+   
Sbjct: 44  ELLERVSRLLVLGRYEALHDLSLDFSDELLNSILRRLRLNPEACLEIFNLASKQQKFR-- 101

Query: 70  AVPNYKHSLQSHWTMIHILTKNKHFKSAQNML-EKIALRDFLSTPSVLNALVKIHDDPDG 128
             P+YK    ++  M+HIL++ ++++  ++ L E +AL    S   V   LV++  +   
Sbjct: 102 --PDYK----AYCKMVHILSRARNYQQTKSYLCELVALNH--SGFVVWGELVRVFKEFSF 153

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           +  V   ++  YA   + ++ L VFD M  +  +P L +C  LL++L +     +   VY
Sbjct: 154 SPTVFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVY 213

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFK-DVRADLFTYNTLIALYCK 247
            +M+   V  ++   +++++A C+S +VDK      E E    +  ++ TYN+LI  Y  
Sbjct: 214 DQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAM 273

Query: 248 KGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGA--TPNHVT 305
            G       V   M   G+S ++VTY SLI G+C++G M EA  +F  +K      +   
Sbjct: 274 IGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHM 333

Query: 306 YTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMN 365
           Y  L+DGYCR   + +A+R+ + M   GV       NS++   CK G++ +A ++ + MN
Sbjct: 334 YGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMN 393

Query: 366 EKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMD 425
           +  + PD+ T NTL++ YC+ G    A+K+ ++M +  ++    TY  L+ G+ +     
Sbjct: 394 DWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFH 453

Query: 426 IAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
               L   ML  G +    S S L++      +    +KL +  ++RGL  D      +I
Sbjct: 454 DVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMI 513

Query: 486 RRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
              CK EKV+ A+ + + +           Y +L++ Y++ G  K    + + M R+ + 
Sbjct: 514 SGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIF 573

Query: 546 ITLKIYRSFSAS---YAKDNEILDL 567
            T+++Y +  +    Y   N++ DL
Sbjct: 574 PTIEMYNTLISGAFKYRHLNKVADL 598



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 92/364 (25%), Positives = 181/364 (49%), Gaps = 2/364 (0%)

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           L+  Y    + ++   VF+ ++   L+   H   VL++   +        +V+  M+++G
Sbjct: 302 LIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIG 361

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
           V  N  + N LI+  CKS  + + E++   M    ++ D  TYNTL+  YC+ G   EAL
Sbjct: 362 VRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEAL 421

Query: 256 AVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGY 313
            + D+M ++ + P ++TYN L+ G+ R G   +   L++ +  +G   + ++ +TL++  
Sbjct: 422 KLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEAL 481

Query: 314 CRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDN 373
            +  D  EA++L E + A+G+    +T N ++  LCK  ++ +A  +L+ +N  +  P  
Sbjct: 482 FKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAV 541

Query: 374 VTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFG 433
            T   L + Y K+G+   A  VK  M   G+      Y  LI G  K + ++   +L+  
Sbjct: 542 QTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIE 601

Query: 434 MLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEK 493
           +   G +P+  +Y  L+ G+CN    +       E + +G+ ++V++   +     + +K
Sbjct: 602 LRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDK 661

Query: 494 VDYA 497
           +D A
Sbjct: 662 IDEA 665



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 86/289 (29%), Positives = 151/289 (52%), Gaps = 26/289 (8%)

Query: 155 QMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSS 214
           ++R   L P +     L+       + D  +    +M++ G+  N+++ + + ++  +  
Sbjct: 601 ELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLD 660

Query: 215 DVDKVEKLLCEMEFKDVRADLF--TYNTL------IALYCKKGMHYEALAVQDRMEREGI 266
            +D+     C +  K V  DL    Y +L       A  C K     A +V++   ++ +
Sbjct: 661 KIDEA----CLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKI-AESVENSTPKKLL 715

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDIKGA---TPNHVTYTTLIDGYCRANDLEEAL 323
            P+ + YN  I G C+ G++ +AR+LF D+  +    P+  TYT LI G   A D+ +A 
Sbjct: 716 VPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAF 775

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
            LR+ MA KG+ P +VTYN++++ LCK G +  A RLL+++ +K I P+ +T NTLI+  
Sbjct: 776 TLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGL 835

Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLF 432
            K G+ A AM++K +M+E G          L+ G  K  ++DI KE++ 
Sbjct: 836 VKSGNVAEAMRLKEKMIEKG----------LVRGSDKQGDVDIPKEVVL 874



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 104/412 (25%), Positives = 188/412 (45%), Gaps = 6/412 (1%)

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
           Y+ +    D L ++  M    +     +C+ LL +L K    +   K+++ ++  G++ +
Sbjct: 446 YSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTD 505

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
               NV+I   CK   V++ +++L  +     +  + TY  L   Y K G   EA AV++
Sbjct: 506 TITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKE 565

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRAN 317
            MER+GI P I  YN+LI G  +   + +   L  +++  G TP   TY  LI G+C   
Sbjct: 566 YMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIG 625

Query: 318 DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE-KKIAPDNVTC 376
            +++A      M  KG+   V   + I   L +  +I +A  LL ++ +   + P   + 
Sbjct: 626 MIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSL 685

Query: 377 NTLINAYCK--IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGM 434
              + A     +     A  V+N   +  L+ +   Y   I G CKA +++ A++L   +
Sbjct: 686 KEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDL 745

Query: 435 LDAG-FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEK 493
           L +  F P   +Y+ L+ G     +      L DE   +G+  ++  Y ALI+  CK   
Sbjct: 746 LSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGN 805

Query: 494 VDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
           VD AQRL + +   GI  +++ Y +L     ++G       + + M  + L+
Sbjct: 806 VDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGLV 857



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 96/405 (23%), Positives = 176/405 (43%), Gaps = 37/405 (9%)

Query: 83  TMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYAN 142
           T++  L K   F  A  + E +  R  L+    LN ++             S L      
Sbjct: 476 TLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMI-------------SGL----CK 518

Query: 143 LKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHL 202
           ++   +  ++ D + +    P +     L +   K       + V + M + G+   I +
Sbjct: 519 MEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEM 578

Query: 203 YNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRME 262
           YN LI    K   ++KV  L+ E+  + +   + TY  LI  +C  GM  +A A    M 
Sbjct: 579 YNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMI 638

Query: 263 REGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEA 322
            +GI+ ++   + + +   R  ++ EA  L + I       V +  L+ GY    +  EA
Sbjct: 639 EKGITLNVNICSKIANSLFRLDKIDEACLLLQKI-------VDFDLLLPGYQSLKEFLEA 691

Query: 323 -----LRLREVMAA-------KGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM-NEKKI 369
                L+ +++  +       K + P  + YN  +  LCK G++ DA +L +++ +  + 
Sbjct: 692 SATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRF 751

Query: 370 APDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKE 429
            PD  T   LI+     GD   A  +++ M   G++ +  TY ALI G CK   +D A+ 
Sbjct: 752 IPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQR 811

Query: 430 LLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGL 474
           LL  +   G +P+  +Y+ L+DG     N    ++L ++ + +GL
Sbjct: 812 LLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGL 856



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 104/470 (22%), Positives = 196/470 (41%), Gaps = 45/470 (9%)

Query: 128 GNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKV 187
            + H+   L+  Y      +D ++V D M    +  +   C  L+N   K        ++
Sbjct: 329 ADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQI 388

Query: 188 YKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCK 247
           + +M    +  + H YN L+   C++  VD+  KL  +M  K+V   + TYN L+  Y +
Sbjct: 389 FSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSR 448

Query: 248 KGMHYEALAVQDRMEREGISP-----------------------------------DIVT 272
            G  ++ L++   M + G++                                    D +T
Sbjct: 449 IGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTIT 508

Query: 273 YNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMA 330
            N +I G C+  ++ EA+ +  ++      P   TY  L  GY +  +L+EA  ++E M 
Sbjct: 509 LNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYME 568

Query: 331 AKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTA 390
            KG++P +  YN+++    K   +     L+ E+  + + P   T   LI  +C IG   
Sbjct: 569 RKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMID 628

Query: 391 SAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAG-FSPSYCSYSWL 449
            A      M+E G+ L+      + +   +  ++D A  LL  ++D     P Y S    
Sbjct: 629 KAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEF 688

Query: 450 VDG---YCNKNNEEALLKLLDEFVSRGLCVDVS-VYRALIRRFCKKEKVDYAQRLF-NLM 504
           ++     C K  + A  + ++    + L V  + VY   I   CK  K++ A++LF +L+
Sbjct: 689 LEASATTCLKTQKIA--ESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLL 746

Query: 505 QGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSF 554
             +  + D   YT L +    AG+      + D+M  + ++  +  Y + 
Sbjct: 747 SSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNAL 796


>gi|297833514|ref|XP_002884639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297330479|gb|EFH60898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 864

 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 129/402 (32%), Positives = 198/402 (49%), Gaps = 4/402 (0%)

Query: 150 LQVFDQMRVHNLMPHLHAC-TVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIH 208
           +  FD++R  +     + C + LL SLAK  L  + +  Y++M   G V  +  Y  +++
Sbjct: 144 ISCFDELREVSGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVN 203

Query: 209 ACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI-S 267
           A CK+   +  E  +C++       D     +L+  +C+     +AL V D M REG  +
Sbjct: 204 ALCKNGYTEAAEMFMCKILKVGFLLDSHIVTSLLLGFCRGLNLRDALKVFDLMSREGTCA 263

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
           P+ V+Y+ LIHG C  GR+ EA  L   +  KG  P+  TYT LI   C    +++A  L
Sbjct: 264 PNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNL 323

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
            + M A+G  P V TY  ++  LC++G+I +AN +  +M +  I P  +T N LIN YCK
Sbjct: 324 FDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCK 383

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            G    A ++   M +     +  T+  L+ G C+  +   A  LL  MLD G SP   S
Sbjct: 384 DGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVS 443

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+ L+DG C + +     KLL    S  L  D   + A+I  FCK+ K D A     LM 
Sbjct: 444 YNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVASAFLGLML 503

Query: 506 GNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMIT 547
             GI  D V  T+L       G+ +    IL+ + + R++ T
Sbjct: 504 RKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRMLTT 545



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 126/514 (24%), Positives = 230/514 (44%), Gaps = 21/514 (4%)

Query: 62  AFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALV- 120
           A+  +       +   +  + T+++ L KN + ++A+  + KI    FL    ++ +L+ 
Sbjct: 179 AYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMCKILKVGFLLDSHIVTSLLL 238

Query: 121 ------------KIHD--DPDG----NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLM 162
                       K+ D    +G    NS   S L+     +   ++   + DQM      
Sbjct: 239 GFCRGLNLRDALKVFDLMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQ 298

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
           P     TVL+ +L    L D  + ++ +M+  G   N+H Y VLI   C+   +++   +
Sbjct: 299 PSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGV 358

Query: 223 LCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR 282
             +M    +   + TYN LI  YCK G    A  +   ME+    P++ T+N L+ G CR
Sbjct: 359 CRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCR 418

Query: 283 EGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVT 340
            G+  +A  L + +   G +P+ V+Y  LIDG CR   +  A +L   M +  + P  +T
Sbjct: 419 VGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLT 478

Query: 341 YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML 400
           + +I+   CK+G+   A+  L  M  K I+ D VT  TLI+  C +G T  A+ +   ++
Sbjct: 479 FTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLV 538

Query: 401 EAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEE 460
           +  ++    +   ++    K  ++     +L  +   G  PS  +Y+ LVDG     +  
Sbjct: 539 KMRMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDIS 598

Query: 461 ALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLA 520
              ++L+     G   +V  Y  +I   C+  +V+ A++L + MQ +G+  + V YT + 
Sbjct: 599 GSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMV 658

Query: 521 YAYWRAGEPKACSDILDDMYRRRLMITLKIYRSF 554
             Y   G+     + +  M  R   +  +IY S 
Sbjct: 659 KGYVNNGKLDRALETVRAMVERGYELNDRIYSSL 692



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 109/386 (28%), Positives = 188/386 (48%), Gaps = 37/386 (9%)

Query: 145 MTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYN 204
           +      +FD+M      P++H  TVL++ L +D   +    V +KMV+ G+  ++  YN
Sbjct: 316 LIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYN 375

Query: 205 VLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMERE 264
            LI+  CK   V    +LL  ME +  + ++ T+N L+   C+ G  Y+A+ +  RM   
Sbjct: 376 ALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDN 435

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDI---------------------------- 296
           G+SPDIV+YN LI G CREG M  A +L   +                            
Sbjct: 436 GLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVA 495

Query: 297 ---------KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRK 347
                    KG + + VT TTLIDG C      +AL + E +    +     + N IL  
Sbjct: 496 SAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRMLTTPHSLNVILDM 555

Query: 348 LCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLD 407
           L K  ++++   +L ++N+  + P  VT  TL++   + GD + + ++   M  +G + +
Sbjct: 556 LSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDISGSFRMLELMKLSGCLPN 615

Query: 408 QFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLD 467
            + Y  +I+G C+   ++ A++LL  M D+G SP++ +Y+ +V GY N    +  L+ + 
Sbjct: 616 VYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVR 675

Query: 468 EFVSRGLCVDVSVYRALIRRFCKKEK 493
             V RG  ++  +Y +L+R F   +K
Sbjct: 676 AMVERGYELNDRIYSSLLRGFVLSQK 701



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 73/301 (24%), Positives = 146/301 (48%), Gaps = 10/301 (3%)

Query: 187 VYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYC 246
           + + +V++ ++   H  NV++    K   + +   +L ++    +   + TY TL+    
Sbjct: 533 ILETLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLI 592

Query: 247 KKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHV 304
           + G    +  + + M+  G  P++  Y  +I+G C+ GR+ EA +L   ++  G +PNHV
Sbjct: 593 RSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHV 652

Query: 305 TYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRK--LCKEGRIRDAN---- 358
           TYT ++ GY     L+ AL     M  +G       Y+S+LR   L ++G IR+ +    
Sbjct: 653 TYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLRGFVLSQKG-IRETDPECI 711

Query: 359 RLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGF 418
           + L  + E+     +  C  L+   CK G T  +  +   +L++G+ L++     ++  +
Sbjct: 712 KELISVVEQLGGSTSGLCIFLVTRLCKEGRTDESNGLVQTILKSGVFLEK-AIDIIMESY 770

Query: 419 CKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDV 478
           C  K+     EL+  +L +GF PS+ S+  ++ G   + + E   +L+ E ++    V+ 
Sbjct: 771 CSKKKHTKCVELITLVLKSGFVPSFKSFCLVIQGLKKEGDTERARELVMELLTSNGVVEK 830

Query: 479 S 479
           S
Sbjct: 831 S 831



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/245 (26%), Positives = 102/245 (41%), Gaps = 4/245 (1%)

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           LREV   +  YP    Y+S+L  L K      A      M         +   T++NA C
Sbjct: 150 LREVSGFRLNYP---CYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALC 206

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGF-SPSY 443
           K G T +A     ++L+ G +LD     +L+ GFC+   +  A ++   M   G  +P+ 
Sbjct: 207 KNGYTEAAEMFMCKILKVGFLLDSHIVTSLLLGFCRGLNLRDALKVFDLMSREGTCAPNS 266

Query: 444 CSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNL 503
            SYS L+ G C     E    L D+   +G       Y  LI+  C +  +D A  LF+ 
Sbjct: 267 VSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDE 326

Query: 504 MQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNE 563
           M   G   +   YT L     R G+ +  + +   M +  +  ++  Y +    Y KD  
Sbjct: 327 MIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCKDGR 386

Query: 564 ILDLF 568
           ++  F
Sbjct: 387 VVPAF 391


>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
          Length = 902

 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 107/328 (32%), Positives = 176/328 (53%), Gaps = 3/328 (0%)

Query: 195 GVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFK-DVRADLFTYNTLIALYCKKGMHYE 253
           G+  N + Y  +I   CK   VD+  K+  EM  K +V+ +   YN LI  YC +G    
Sbjct: 550 GIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDT 609

Query: 254 ALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLID 311
           AL  +DRM   G++  + TYN L+H    +GR  EA  L  ++  KG  P+  TY  LI+
Sbjct: 610 ALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILIN 669

Query: 312 GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAP 371
           G+C+  ++++AL + E M+ +GV   VVTY +++  L K+G++++ ++L +E   + I P
Sbjct: 670 GHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRP 729

Query: 372 DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
           D V  N LIN++   G+   A ++   M +  +  D  TY  L+ G C    +D A++L+
Sbjct: 730 DLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLI 789

Query: 432 FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
             M + G  P   +Y+ L+ GY  K + +  L++ +E +++G    +  Y ALI+  CK 
Sbjct: 790 DEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKN 849

Query: 492 EKVDYAQRLFNLMQGNGILGDSVIYTSL 519
            + D A+ +   M  NGI  D   Y SL
Sbjct: 850 GQGDDAENMVKEMVENGITPDDSTYISL 877



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 101/332 (30%), Positives = 175/332 (52%), Gaps = 3/332 (0%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHN-LMPHLHACTVLLNSLAKDRLTDMVWKV 187
           N +    ++  +  +    + ++VFD+M     + P       L+         D     
Sbjct: 554 NQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLY 613

Query: 188 YKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCK 247
             +MV+ GV   +  YN+L+HA        +  +L+ EM  K +  D+FTYN LI  +CK
Sbjct: 614 RDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCK 673

Query: 248 KGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVT 305
           +G   +AL + + M R G+   +VTY +LI+   ++G+++E  +LF +   +G  P+ V 
Sbjct: 674 EGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVL 733

Query: 306 YTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMN 365
           Y  LI+ +  + +++ A  +   M  K + P  VTYN+++R LC  GR+ +A +L++EM 
Sbjct: 734 YNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMT 793

Query: 366 EKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMD 425
           E+ I PD VT NTLI+ Y   GD   A++++N M+  G      TY ALI G CK  + D
Sbjct: 794 ERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGD 853

Query: 426 IAKELLFGMLDAGFSPSYCSYSWLVDGYCNKN 457
            A+ ++  M++ G +P   +Y  L++G   ++
Sbjct: 854 DAENMVKEMVENGITPDDSTYISLIEGLTTED 885



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 128/462 (27%), Positives = 218/462 (47%), Gaps = 12/462 (2%)

Query: 106 LRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHL 165
            +  LS    L+ L  +       S + + L+   A ++     L+++ +M+  +L    
Sbjct: 398 FKSVLSADKALSPLAVLPHLDGAPSSLPNLLLTASAAVRPHATSLRLYSRMKSLSLPIST 457

Query: 166 HACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCE 225
            +   LL++L     +   + ++  M +L +      +N+++   C +    +  +LL +
Sbjct: 458 ASLHPLLSALP----SAPAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQ 513

Query: 226 MEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRM-EREGISPDIVTYNSLIHGFCREG 284
           M     R +  TYNT+IA +C +G    AL +   M ER GI+P+  TY ++I G+C+ G
Sbjct: 514 MP----RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVG 569

Query: 285 RMREARRLFRDI--KGAT-PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTY 341
           R+ EA ++F ++  KG   P  V Y  LI GYC    L+ AL  R+ M  +GV   V TY
Sbjct: 570 RVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATY 629

Query: 342 NSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLE 401
           N ++  L  +GR  +A  L+ EM  K +APD  T N LIN +CK G+   A+++   M  
Sbjct: 630 NLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSR 689

Query: 402 AGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEA 461
            G+     TY ALI+   K  ++    +L    +  G  P    Y+ L++ +    N + 
Sbjct: 690 RGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDR 749

Query: 462 LLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAY 521
             +++ E   + +  D   Y  L+R  C   +VD A++L + M   GI  D V Y +L  
Sbjct: 750 AFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLIS 809

Query: 522 AYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNE 563
            Y   G+ K    I ++M  +    TL  Y +      K+ +
Sbjct: 810 GYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQ 851



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 114/421 (27%), Positives = 190/421 (45%), Gaps = 29/421 (6%)

Query: 161 LMPHLHACT-----VLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKS-- 213
           ++PHL         +LL + A  R      ++Y +M  L +  +    + L+ A   +  
Sbjct: 413 VLPHLDGAPSSLPNLLLTASAAVRPHATSLRLYSRMKSLSLPISTASLHPLLSALPSAPA 472

Query: 214 ----SDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
               +D+ ++   LC            T+N ++   C  G    AL +  +M R    P+
Sbjct: 473 FALFADMFRLRLPLCTT----------TFNIMLRHLCSAGKPARALELLRQMPR----PN 518

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDIK---GATPNHVTYTTLIDGYCRANDLEEALRLR 326
            VTYN++I GFC  GR++ A  + R+++   G  PN  TY T+I G+C+   ++EA+++ 
Sbjct: 519 AVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVF 578

Query: 327 EVMAAKG-VYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
           + M  KG V P  V YN+++   C +G++  A    + M E+ +A    T N L++A   
Sbjct: 579 DEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFM 638

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            G    A ++   M   GL  D FTY  LI+G CK   +  A E+   M   G   +  +
Sbjct: 639 DGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVT 698

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+ L+     K   +   KL DE V RG+  D+ +Y ALI        +D A  +   M+
Sbjct: 699 YTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEME 758

Query: 506 GNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEIL 565
              I  D V Y +L       G       ++D+M  R +   L  Y +  + Y+   ++ 
Sbjct: 759 KKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVK 818

Query: 566 D 566
           D
Sbjct: 819 D 819



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 87/264 (32%), Positives = 135/264 (51%), Gaps = 2/264 (0%)

Query: 170 VLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFK 229
           +L+++L  D      +++ ++M   G+  ++  YN+LI+  CK  +V K  ++   M  +
Sbjct: 631 LLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRR 690

Query: 230 DVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA 289
            VRA + TY  LI    KKG   E   + D   R GI PD+V YN+LI+     G +  A
Sbjct: 691 GVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRA 750

Query: 290 RRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRK 347
             +  ++  K   P+ VTY TL+ G C    ++EA +L + M  +G+ P +VTYN+++  
Sbjct: 751 FEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISG 810

Query: 348 LCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLD 407
              +G ++DA R+ NEM  K   P  +T N LI   CK G    A  +   M+E G+  D
Sbjct: 811 YSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPD 870

Query: 408 QFTYKALIHGFCKAKEMDIAKELL 431
             TY +LI G     E  I  E L
Sbjct: 871 DSTYISLIEGLTTEDERAIDDERL 894



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 50/209 (23%), Positives = 81/209 (38%), Gaps = 17/209 (8%)

Query: 75  KHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLS 134
           + ++ ++  +I+ L+K    +    + ++   R       + NAL+        NSH  S
Sbjct: 693 RATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALI--------NSHSTS 744

Query: 135 WLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQL 194
             +             ++  +M    + P       L+  L      D   K+  +M + 
Sbjct: 745 GNI---------DRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTER 795

Query: 195 GVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEA 254
           G+  ++  YN LI       DV    ++  EM  K     L TYN LI   CK G   +A
Sbjct: 796 GIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDA 855

Query: 255 LAVQDRMEREGISPDIVTYNSLIHGFCRE 283
             +   M   GI+PD  TY SLI G   E
Sbjct: 856 ENMVKEMVENGITPDDSTYISLIEGLTTE 884


>gi|326510773|dbj|BAJ91734.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 711

 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 120/443 (27%), Positives = 209/443 (47%), Gaps = 21/443 (4%)

Query: 80  SHWTMIHILTKNKHFKSAQN----MLEKIALRDFLSTPSVLNALVK-------------- 121
           ++ T+IH   K      A N    M+++  + D ++  S++NAL K              
Sbjct: 118 TYNTVIHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQM 177

Query: 122 IHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLT 181
           + +    N    + ++  Y+ L   ++  ++F +M    L+P + +    ++SL K   +
Sbjct: 178 VDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRS 237

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
               +++  M   G   NI  Y +L+H          +      M+   + A+   +  L
Sbjct: 238 KEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTIL 297

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGA 299
           I  Y K+GM  EA+ +   M+ +G+SPD+ TY++LI   CR GR+ +A   F  +   G 
Sbjct: 298 IDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGV 357

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGV-YPGVVTYNSILRKLCKEGRIRDAN 358
            PN V Y +LI G+C   DL +A  L   M   G+  P +  +NSI+  +CKEGR+ DA+
Sbjct: 358 QPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAH 417

Query: 359 RLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGF 418
            + + + +     D +  NTLI+ YC +G+   A  V + M+ AG+  D FTY  L++G+
Sbjct: 418 HIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGY 477

Query: 419 CKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDV 478
            K+  +D    L   M D    P+  +Y+ ++DG        A  K+L E +  G  V +
Sbjct: 478 FKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSL 537

Query: 479 SVYRALIRRFCKKEKVDYAQRLF 501
             Y  +++  C+    D A  +F
Sbjct: 538 PTYNIILKGLCRNNCTDEAIVMF 560



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 118/486 (24%), Positives = 213/486 (43%), Gaps = 18/486 (3%)

Query: 80  SHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIF 139
           S+  ++  L  +   + A ++L  +A  + + +P V+     IH               F
Sbjct: 81  SYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHG--------------F 126

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
           +   K+ +    ++ +M     +P +     ++N+L K R  D    + ++MV  GV  N
Sbjct: 127 FKEGKIGK-ACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPN 185

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
              Y  +IH        ++  K+  EM  + +  D+ ++N+ +   CK G   EA  +  
Sbjct: 186 KVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFY 245

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKG--ATPNHVTYTTLIDGYCRAN 317
            M  +G  P+IVTY  L+HG+  EG   +    F  +KG     N + +T LID Y +  
Sbjct: 246 SMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRG 305

Query: 318 DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCN 377
            ++EA+ +   M  +G+ P V TY++++  LC+ GR+ DA    N+M    + P+ V  +
Sbjct: 306 MMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYH 365

Query: 378 TLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY-KALIHGFCKAKEMDIAKELLFGMLD 436
           +LI  +C  GD   A ++   M+  G+      +  +++H  CK   +  A  +   + D
Sbjct: 366 SLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKD 425

Query: 437 AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDY 496
            G       ++ L+DGYC          +LD  +S G+  D   Y  L+  + K  ++D 
Sbjct: 426 IGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDD 485

Query: 497 AQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSA 556
              LF  M    I   +V Y  +    +RAG   A   +L +M      ++L  Y     
Sbjct: 486 GLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIILK 545

Query: 557 SYAKDN 562
              ++N
Sbjct: 546 GLCRNN 551



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 129/480 (26%), Positives = 213/480 (44%), Gaps = 53/480 (11%)

Query: 149 GLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY-KKMVQLGVVANIHLYNVLI 207
           GL  F ++    L     A   +L  L   + TD   KV  ++M +LG V +   Y +++
Sbjct: 27  GLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKVLLRRMTELGCVPDAFSYAIVL 86

Query: 208 HACCKSSDVDKVEKLLCEMEFKD--VRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
              C  +   +   LL  M  ++     D+ TYNT+I  + K+G   +A  +   M ++G
Sbjct: 87  KRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHGFFKEGKIGKACNLYHEMMQQG 146

Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEAL 323
             PD+VT+NS+I+  C+   +  A  L R +   G  PN VTYT++I GY      EEA 
Sbjct: 147 FVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPNKVTYTSMIHGYSTLGRWEEAT 206

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVT-------- 375
           ++   M  +G+ P +V++NS +  LCK GR ++A  +   M  K   P+ VT        
Sbjct: 207 KMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGY 266

Query: 376 ----C--------NT---------------LINAYCKIGDTASAMKVKNRMLEAGLMLDQ 408
               C        NT               LI+AY K G    AM + + M   GL  D 
Sbjct: 267 ATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDV 326

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
           FTY  LI   C+   +  A +    M+  G  P+   Y  L+ G+C   +     +L+ E
Sbjct: 327 FTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYE 386

Query: 469 FVSRGLC-VDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
            ++ G+   +++ + +++   CK+ +V  A  +F+L++  G   D +++ +L   Y   G
Sbjct: 387 MMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVG 446

Query: 528 EPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKEMQ 587
           E      +LD M    +      Y +    Y         F S  +D GL   ++F+EM 
Sbjct: 447 EMGKAFSVLDAMISAGIGPDTFTYNTLVNGY---------FKSGRIDDGL---NLFREMS 494



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 107/461 (23%), Positives = 196/461 (42%), Gaps = 97/461 (21%)

Query: 65  KWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHD 124
           +  ++ VP  K    ++ +MIH  +    ++ A  M  ++  R  +              
Sbjct: 176 QMVDNGVPPNK---VTYTSMIHGYSTLGRWEEATKMFREMTGRGLI-------------- 218

Query: 125 DPDGNSHVLSWLVIFYANLK--MTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTD 182
            PD    ++SW     +  K   +++  ++F  M      P++    +LL+  A +    
Sbjct: 219 -PD----IVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFA 273

Query: 183 MVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLI 242
            +   +  M   G+VAN  ++ +LI A  K   +D+   +L EM+ + +  D+FTY+TLI
Sbjct: 274 DMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLI 333

Query: 243 ALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFC--------------------- 281
           +  C+ G   +A+   ++M   G+ P+ V Y+SLI GFC                     
Sbjct: 334 SALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIP 393

Query: 282 ---------------REGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALR 324
                          +EGR+ +A  +F  +K  G   + + + TLIDGYC   ++ +A  
Sbjct: 394 RPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFS 453

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           + + M + G+ P   TYN+++    K GRI D   L  EM++KKI P  VT N +++   
Sbjct: 454 VLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLF 513

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCK------------------------ 420
           + G T +A K+ + M+  G  +   TY  ++ G C+                        
Sbjct: 514 RAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNIT 573

Query: 421 -----------AKEMDIAKELLFGMLDAGFSPSYCSYSWLV 450
                       +  + AK+L   + D+G  P+  +Y  ++
Sbjct: 574 TLNTMINSMYTVQRREEAKDLFSAISDSGLVPNASTYGIMI 614



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 92/371 (24%), Positives = 164/371 (44%), Gaps = 5/371 (1%)

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLI-ALYCKKGMHYEALAVQ 258
           I  Y V+++ CC++   +        +    ++AD    NT++  L C K        + 
Sbjct: 8   IFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKVLL 67

Query: 259 DRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKG----ATPNHVTYTTLIDGYC 314
            RM   G  PD  +Y  ++   C + R ++A  L R +       +P+ VTY T+I G+ 
Sbjct: 68  RRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHGFF 127

Query: 315 RANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNV 374
           +   + +A  L   M  +G  P VVT+NSI+  LCK   + +A  LL +M +  + P+ V
Sbjct: 128 KEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPNKV 187

Query: 375 TCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGM 434
           T  ++I+ Y  +G    A K+   M   GL+ D  ++ + +   CK      A E+ + M
Sbjct: 188 TYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSM 247

Query: 435 LDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKV 494
              G  P+  +Y  L+ GY  +     ++   +     G+  +  V+  LI  + K+  +
Sbjct: 248 AAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMM 307

Query: 495 DYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSF 554
           D A  + + MQG G+  D   Y++L  A  R G      D  + M    +     +Y S 
Sbjct: 308 DEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSL 367

Query: 555 SASYAKDNEIL 565
              +    +++
Sbjct: 368 IQGFCTHGDLV 378



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 94/352 (26%), Positives = 160/352 (45%), Gaps = 40/352 (11%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAK-DRLTDMVWKV 187
           N  V + L+  YA   M  + + +  +M+   L P +   + L+++L +  RL D V K 
Sbjct: 290 NCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDK- 348

Query: 188 YKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEME-------------------- 227
           + +M+  GV  N  +Y+ LI   C   D+ K ++L+ EM                     
Sbjct: 349 FNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSIC 408

Query: 228 --------------FKDV--RADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
                          KD+  R+D+  +NTLI  YC  G   +A +V D M   GI PD  
Sbjct: 409 KEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTF 468

Query: 272 TYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           TYN+L++G+ + GR+ +   LFR++  K   P  VTY  ++DG  RA     A ++   M
Sbjct: 469 TYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEM 528

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
              G    + TYN IL+ LC+     +A  +  ++    +  +  T NT+IN+   +   
Sbjct: 529 IGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRR 588

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
             A  + + + ++GL+ +  TY  +I    K   ++ A  +   M  +G +P
Sbjct: 589 EEAKDLFSAISDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSMEKSGCAP 640



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 87/337 (25%), Positives = 159/337 (47%), Gaps = 5/337 (1%)

Query: 235 LFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARR-LF 293
           +FTY  ++   C+       LA   R+ R G+  D    N+++   C   R  +A + L 
Sbjct: 8   IFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKVLL 67

Query: 294 RDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMA-AKGV-YPGVVTYNSILRKLC 349
           R +   G  P+  +Y  ++   C  N  ++AL L  +MA  +GV  P VVTYN+++    
Sbjct: 68  RRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHGFF 127

Query: 350 KEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQF 409
           KEG+I  A  L +EM ++   PD VT N++INA CK     +A  +  +M++ G+  ++ 
Sbjct: 128 KEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPNKV 187

Query: 410 TYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEF 469
           TY ++IHG+      + A ++   M   G  P   S++  +D  C     +   ++    
Sbjct: 188 TYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSM 247

Query: 470 VSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEP 529
            ++G   ++  Y  L+  +  +         FN M+G+GI+ + +++T L  AY + G  
Sbjct: 248 AAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMM 307

Query: 530 KACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
                IL +M  + L   +  Y +  ++  +   + D
Sbjct: 308 DEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLAD 344



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 74/265 (27%), Positives = 122/265 (46%), Gaps = 5/265 (1%)

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR- 324
           P I TY  +++G CR  R       F  +   G   +     T++   C     ++A++ 
Sbjct: 6   PTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKV 65

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM--NEKKIAPDNVTCNTLINA 382
           L   M   G  P   +Y  +L++LC + R + A  LL  M   E   +PD VT NT+I+ 
Sbjct: 66  LLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHG 125

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           + K G    A  + + M++ G + D  T+ ++I+  CKA+ +D A+ LL  M+D G  P+
Sbjct: 126 FFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPN 185

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ ++ GY      E   K+  E   RGL  D+  + + +   CK  +   A  +F 
Sbjct: 186 KVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFY 245

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAG 527
            M   G   + V Y  L + Y   G
Sbjct: 246 SMAAKGHRPNIVTYGILLHGYATEG 270



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/286 (23%), Positives = 120/286 (41%), Gaps = 5/286 (1%)

Query: 299 ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDAN 358
           A P   TY  +++G CRA   E  L     +   G+       N++L+ LC   R  DA 
Sbjct: 4   APPTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAV 63

Query: 359 R-LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML--EAGLMLDQFTYKALI 415
           + LL  M E    PD  +   ++   C    +  A+ +   M   E     D  TY  +I
Sbjct: 64  KVLLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVI 123

Query: 416 HGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLC 475
           HGF K  ++  A  L   M+  GF P   +++ +++  C     +    LL + V  G+ 
Sbjct: 124 HGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVP 183

Query: 476 VDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDI 535
            +   Y ++I  +    + + A ++F  M G G++ D V + S   +  + G  K  ++I
Sbjct: 184 PNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEI 243

Query: 536 LDDMYRRRLMITLKIYRSFSASYAKDNEILDL--FWSHVVDRGLMS 579
              M  +     +  Y      YA +    D+  F++ +   G+++
Sbjct: 244 FYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVA 289



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 52/222 (23%), Positives = 91/222 (40%), Gaps = 2/222 (0%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
             V D M    + P       L+N   K    D    ++++M    +      YN+++  
Sbjct: 452 FSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDG 511

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
             ++      +K+L EM        L TYN ++   C+     EA+ +  ++    +  +
Sbjct: 512 LFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFN 571

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLRE 327
           I T N++I+      R  EA+ LF  I   G  PN  TY  +I    +   +EEA  +  
Sbjct: 572 ITTLNTMINSMYTVQRREEAKDLFSAISDSGLVPNASTYGIMIRNLLKEGSVEEADNMFS 631

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI 369
            M   G  P     N  +R L ++G I  A   +++++ K I
Sbjct: 632 SMEKSGCAPCSRLLNDTIRTLLEKGEIVKAGNYMSKVDGKSI 673


>gi|297746072|emb|CBI16128.3| unnamed protein product [Vitis vinifera]
          Length = 563

 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 137/505 (27%), Positives = 238/505 (47%), Gaps = 8/505 (1%)

Query: 66  WAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDD 125
           +  SA+  ++H+ QS   ++H+L  +  F  +Q++L K+      S+    ++L      
Sbjct: 26  FTSSALQGFQHTHQSISFILHLLISSNLFSHSQSLLLKLISGQISSSSFTPSSLFHELTQ 85

Query: 126 PDGNS---HVLSWLVIFYANLK--MTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRL 180
           P  +S   HVL    I  A+++  + +  L  F+QM    L+P  +    LL  L K   
Sbjct: 86  PHLDSFPTHVLIHEAIINAHVRSQLPEQALFYFNQMIGRGLVPGSNTFNNLLILLIKSNF 145

Query: 181 TDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNT 240
            +  W+V+ +  +  V  +++ + ++I  CC+   +DK  ++L +ME   +  ++  Y T
Sbjct: 146 FEKAWRVFNE-TKGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTT 204

Query: 241 LIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--G 298
           LI   CK G       +  +M    +  +  TY  LI+GF + G  ++   L+  +K  G
Sbjct: 205 LIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTG 264

Query: 299 ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDAN 358
             PN  TY ++I   C    L  A  L + M  +GV   VVTYN+++  LC+E R+ +A 
Sbjct: 265 IVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAE 324

Query: 359 RLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGF 418
           RL+  M    ++P+ ++ NTLI+ YC IG+   A  + N+M  +G      TY  LI GF
Sbjct: 325 RLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGF 384

Query: 419 CKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDV 478
            +AK      +++  M   G SPS  +Y+ L+D     +N E   ++       GL  D+
Sbjct: 385 SEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADI 444

Query: 479 SVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDD 538
            +Y  LI   C    +  A +LF  +    +  + VIY ++ Y Y + G       +L +
Sbjct: 445 YIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKE 504

Query: 539 MYRRRLMITLKIYRSFSASYAKDNE 563
           M    ++  +  Y S      KD +
Sbjct: 505 MGENGMVPNVASYNSTIQILCKDEK 529



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 51/172 (29%), Positives = 88/172 (51%), Gaps = 3/172 (1%)

Query: 128 GNSHVLSWLVIFYANLKMTQDGLQVFD---QMRVHNLMPHLHACTVLLNSLAKDRLTDMV 184
           G S  L+   I  A     ++   V D   +M    L P     T+L+++L +    +  
Sbjct: 369 GQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKA 428

Query: 185 WKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIAL 244
           +++Y  M + G+VA+I++Y VLIH  C   D+ +  KL   ++   ++ +   YNT+I  
Sbjct: 429 FQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYG 488

Query: 245 YCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI 296
           YCK+G  Y AL +   M   G+ P++ +YNS I   C++ +  EA  L +D+
Sbjct: 489 YCKEGSSYRALRLLKEMGENGMVPNVASYNSTIQILCKDEKWTEAEVLLKDM 540


>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 118/429 (27%), Positives = 200/429 (46%), Gaps = 7/429 (1%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           Q+   +   +  ++  P+    T L+    ++   D+ + ++ +MV+ G   N   Y+ L
Sbjct: 219 QEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTL 278

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           I+  C    +++   +L EM  K +   ++TY   +   C  G   EA+ +  +M++ G 
Sbjct: 279 INGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGC 338

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
            P+I T+ +LI G  R+G+   A  L+  +   G  P  VTY  LI+  C     E A  
Sbjct: 339 VPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFT 398

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           + + M + G  P   TYN I++  C  G I+ A  + ++M +   +P+ +T NTLI  YC
Sbjct: 399 IFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYC 458

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           K G+  +AM++   M   GL  D +TY  LI GF +  +++ A  L +GM++ G SP++ 
Sbjct: 459 KQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHV 518

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
           +Y+ ++DGY N    +  L L  + V  G       Y  +I  F K   +  A+     M
Sbjct: 519 TYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKM 578

Query: 505 QGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSF-----SASYA 559
              G+L + + YTS      R G       I  +M +R     L  Y S          A
Sbjct: 579 VKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRA 638

Query: 560 KDNEILDLF 568
           +D E+ +L 
Sbjct: 639 EDAEMYNLL 647



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 122/451 (27%), Positives = 195/451 (43%), Gaps = 44/451 (9%)

Query: 145 MTQDG-----LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
           +++DG     + ++ +M    L+P       L+N L  +   +  + ++K M+  G + +
Sbjct: 352 LSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPS 411

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
              YN +I   C   D+ K   +  +M       ++ TYNTLI  YCK+G    A+ + +
Sbjct: 412 TQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLE 471

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGY---- 313
            M+  G+ PD  TY  LI GF R G++  A  LF  +   G +PNHVTYT +IDGY    
Sbjct: 472 IMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLA 531

Query: 314 -------------------------------CRANDLEEALRLREVMAAKGVYPGVVTYN 342
                                           + N + EA      M  +G+ P V+TY 
Sbjct: 532 KVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYT 591

Query: 343 SILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG--DTASAMKVKNRML 400
           S +  LC+ GR   A ++ +EM ++   P+  T ++LI   C+ G  + A    +  R+ 
Sbjct: 592 SFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLT 651

Query: 401 EAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEE 460
             G   +  TY  L+ G C       A +L+  M   G  PS   Y  L+ G C     E
Sbjct: 652 HYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVE 711

Query: 461 ALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLA 520
           + L +     + G  + +S Y+ALI   CK+  ++ AQ +F  M       D V +T L 
Sbjct: 712 SALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVAWTVLL 771

Query: 521 YAYWRAGEPKACSDILDDMYRRRLMITLKIY 551
               + GE   C  +L  M  R   +  + Y
Sbjct: 772 DGLLKEGETDLCLKLLHVMESRNCTLNFQTY 802



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 115/455 (25%), Positives = 215/455 (47%), Gaps = 19/455 (4%)

Query: 75  KHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLS 134
           + SL +  TMI+IL K    + A+ ++  I   D         +L+  H      +H   
Sbjct: 199 RPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGH----CRNH--- 251

Query: 135 WLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQL 194
                  NL +      +FD+M      P+    + L+N L  +   +    + ++MVQ 
Sbjct: 252 -------NLDL---AFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQK 301

Query: 195 GVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEA 254
           G+   ++ Y + + + C +    +  +LL +M+ +    ++ T+  LI+   + G    A
Sbjct: 302 GIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIA 361

Query: 255 LAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDG 312
           + +  +M  +G+ P  VTYN+LI+  C EGR   A  +F+ +   G+ P+  TY  +I  
Sbjct: 362 IGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKC 421

Query: 313 YCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPD 372
           +C   D+++A+ + + M   G  P V+TYN+++   CK+G + +A RLL  M    + PD
Sbjct: 422 FCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPD 481

Query: 373 NVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLF 432
             T   LI+ + + G    A  +   M+E G+  +  TY A+I G+    ++D A  L +
Sbjct: 482 AWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFW 541

Query: 433 GMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKE 492
            M+++G  PS  +Y+ ++ G+   N+         + V +GL  +V  Y + I   C+  
Sbjct: 542 KMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNG 601

Query: 493 KVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
           +   A ++F+ M+      +   Y+SL Y   + G
Sbjct: 602 RTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEG 636



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 102/404 (25%), Positives = 184/404 (45%), Gaps = 13/404 (3%)

Query: 115 VLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQ--DGLQVFDQMRVHNLMPHLHACTVLL 172
           + + ++K    P+    V+++  + Y   K     + +++ + M+ + L P     T L+
Sbjct: 434 IFDKMLKAGSSPN----VITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELI 489

Query: 173 NSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVR 232
           +  ++    +    ++  M++ G+  N   Y  +I      + VD    L  +M      
Sbjct: 490 SGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNL 549

Query: 233 ADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRL 292
               TYN +I+ + K     EA     +M ++G+ P+++TY S I G CR GR   A ++
Sbjct: 550 PSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKI 609

Query: 293 FRDI--KGATPNHVTYTTLIDGYCRANDLEEA--LRLREVMAAKGVYPGVVTYNSILRKL 348
           F ++  +   PN  TY++LI G C+    E+A    L   +   G  P V TY ++++ L
Sbjct: 610 FHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGL 669

Query: 349 CKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ 408
           C EGR  +A++L+  M +K + P       L+   CK     SA+ +   M   G  L  
Sbjct: 670 CGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHL 729

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
             YKALI   CK   ++ A+ +   ML+  ++    +++ L+DG   +   +  LKLL  
Sbjct: 730 SDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVAWTVLLDGLLKEGETDLCLKLLHV 789

Query: 469 FVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGD 512
             SR   ++   Y  L R       +D A ++  + Q  GI+ D
Sbjct: 790 MESRNCTLNFQTYVMLAREL---SALDCAIKIPQISQQLGIVKD 830


>gi|357137687|ref|XP_003570431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Brachypodium distachyon]
          Length = 938

 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 109/375 (29%), Positives = 194/375 (51%), Gaps = 2/375 (0%)

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
           +  + V ++M   GV  ++  YN L+   C++ +VD    ++  M+   V  ++ TY   
Sbjct: 191 ETAFAVAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMF 250

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GA 299
           I  YC++    +A ++ + M R+G+ PD+VT ++L+ G C++GR  EA  LFR+++  GA
Sbjct: 251 IVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGA 310

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
            PNHVTY  LID   +A    E+L L   + ++GV   ++ Y +++  LCKEG+I +A  
Sbjct: 311 APNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKD 370

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
           +          P+ VT   LI+A CK G+   A +V + M E  +  +  T+ ++I+G  
Sbjct: 371 MFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLV 430

Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
           K   +  A + +  M + G  P+  +Y  ++DG      +EA L +  E +  G+ V+  
Sbjct: 431 KRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKF 490

Query: 480 VYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
           +  +L+    K  K++ A+ LF  M   G+L D V YT+L    ++ G   A   +  ++
Sbjct: 491 IVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQEL 550

Query: 540 YRRRLMITLKIYRSF 554
             + L+    +Y  F
Sbjct: 551 TEKNLLPDAVVYNVF 565



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 130/492 (26%), Positives = 224/492 (45%), Gaps = 49/492 (9%)

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           L+   A  +   + L +  ++    ++  L   T L++ L K+   D    +++  +   
Sbjct: 320 LIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDN 379

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
              N   Y VLI A CK+ +VD  E++L EME K +  ++ T++++I    K+G   +A 
Sbjct: 380 HTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKAT 439

Query: 256 AVQDRMEREGISPDIVTY-----------------------------------NSLIHGF 280
                M+  GI P++VTY                                   +SL++G 
Sbjct: 440 DYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGL 499

Query: 281 CREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGV 338
            + G++ +A  LFR++  +G   +HV YTTLIDG  +  +L  A ++ + +  K + P  
Sbjct: 500 KKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDA 559

Query: 339 VTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNR 398
           V YN  +  LC  G+ ++A   L EM    + PD VT NT+I A  + G TA A+K+ N 
Sbjct: 560 VVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNG 619

Query: 399 MLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNN 458
           M  + +  +  TY  LI G  +A  ++ AK LL  M  +GFSP+  ++  ++        
Sbjct: 620 MKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRR 679

Query: 459 EEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTS 518
            + +L++ +  ++ GLC D++VY  L+R  C       A  +   M G GI  D++ + +
Sbjct: 680 SDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNA 739

Query: 519 LAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLM 578
           L   ++++G         D M          +Y   S + A  N +L    S    R   
Sbjct: 740 LILGHFKSGHLDNAFSTYDQM----------LYHGISPNVATFNTLLGGLES--AGRIGE 787

Query: 579 SKHIFKEMQLRN 590
           S  +  EM+ R 
Sbjct: 788 SDMVLNEMKKRG 799



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 120/436 (27%), Positives = 206/436 (47%), Gaps = 14/436 (3%)

Query: 154 DQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKS 213
           D M+   + P++   T+ +    +    D  + +Y++MV+ GV+ ++   + L+   CK 
Sbjct: 233 DTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKD 292

Query: 214 SDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTY 273
               +   L  EME      +  TY  LI    K     E+L++   +   G+  D++ Y
Sbjct: 293 GRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMY 352

Query: 274 NSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAA 331
            +L+   C+EG++ EA+ +FR       TPN VTYT LID  C+A +++ A ++   M  
Sbjct: 353 TALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEE 412

Query: 332 KGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTAS 391
           K + P VVT++SI+  L K G +  A   + EM E+ I P+ VT  T+I+   K     +
Sbjct: 413 KSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEA 472

Query: 392 AMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVD 451
           A+ V + ML  G+ +++F   +L++G  K  +++ A+ L   M + G    + +Y+ L+D
Sbjct: 473 ALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLID 532

Query: 452 GYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILG 511
           G     N  A  K+  E   + L  D  VY   I   C   K   A+     MQ  G+  
Sbjct: 533 GLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKP 592

Query: 512 DSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSH 571
           D V Y ++  A  R G+      +L+ M R  +   L  Y +          I+ LF + 
Sbjct: 593 DQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTL---------IVGLFEAG 643

Query: 572 VVDRGLMSKHIFKEMQ 587
            V++   +K++  EM 
Sbjct: 644 AVEK---AKYLLNEMS 656



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 113/394 (28%), Positives = 191/394 (48%), Gaps = 2/394 (0%)

Query: 169 TVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEF 228
           T L++ L K       +KV +++ +  ++ +  +YNV I+  C      + E  L EM+ 
Sbjct: 528 TTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQS 587

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
             ++ D  TYNT+IA   ++G   +AL + + M+R  I P+++TY++LI G    G + +
Sbjct: 588 TGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEK 647

Query: 289 ARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILR 346
           A+ L  ++   G +P  +T+  ++    +    +  L + E M   G+   +  YN+++R
Sbjct: 648 AKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLCADITVYNTLVR 707

Query: 347 KLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLML 406
            LC  G  R A  +L EM+ + IAPD +T N LI  + K G   +A    ++ML  G+  
Sbjct: 708 VLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISP 767

Query: 407 DQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLL 466
           +  T+  L+ G   A  +  +  +L  M   G  PS  +Y  LV GY  ++N+   ++L 
Sbjct: 768 NVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLY 827

Query: 467 DEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRA 526
            E V +G    VS Y ALI  F K   +  A+ LFN MQ  G+L  S  Y  L   + + 
Sbjct: 828 CEMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILVSGWSKL 887

Query: 527 GEPKACSDILDDMYRRRLMITLKIYRSFSASYAK 560
                    L DM  +    +     S S +++K
Sbjct: 888 RNGTEVRKFLKDMKEKGFSPSKGTLSSISRAFSK 921



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 115/403 (28%), Positives = 196/403 (48%), Gaps = 14/403 (3%)

Query: 190 KMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA------DLFTYNTLIA 243
           +M + GV  +    N ++   C+   VD+   L   M    VR       D+  +N+L+ 
Sbjct: 127 EMCKRGVPFDAVTVNTVLVGLCRDGRVDRAAALAEVM----VRGGGIGGLDVVGWNSLVD 182

Query: 244 LYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATP 301
            YCK G    A AV +RM+ +G+  D+V YNSL+ G CR G +  AR +   +K  G  P
Sbjct: 183 GYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTMKRDGVEP 242

Query: 302 NHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLL 361
           N VTYT  I  YCR N +++A  L E M  KGV P VVT ++++  LCK+GR  +A  L 
Sbjct: 243 NVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALF 302

Query: 362 NEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKA 421
            EM +   AP++VT   LI+   K      ++ +   ++  G+++D   Y AL+   CK 
Sbjct: 303 REMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKE 362

Query: 422 KEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVY 481
            ++D AK++    L    +P+  +Y+ L+D  C   N +   ++L E   + +  +V  +
Sbjct: 363 GKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTF 422

Query: 482 RALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
            ++I    K+  V  A      M+  GI  + V Y ++    ++    +A  D+  +M  
Sbjct: 423 SSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLC 482

Query: 542 RRLMITLKIYRSFSASYAKDNEI--LDLFWSHVVDRGLMSKHI 582
             + +   I  S      K+ +I   +  +  + +RG++  H+
Sbjct: 483 EGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHV 525



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 97/326 (29%), Positives = 160/326 (49%), Gaps = 7/326 (2%)

Query: 234 DLFTYNTLIALYCKKG-MHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRL 292
           D  +YN +++ + ++G +  EAL  +  M + G+  D VT N+++ G CR+GR+  A  L
Sbjct: 102 DTVSYNVVMSGFSEQGGLAPEALLAE--MCKRGVPFDAVTVNTVLVGLCRDGRVDRAAAL 159

Query: 293 FRD-IKGATPNH---VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
               ++G        V + +L+DGYC+  D+E A  + E M A+GV   VV YNS++  L
Sbjct: 160 AEVMVRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGL 219

Query: 349 CKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ 408
           C+ G +  A  +++ M    + P+ VT    I  YC+      A  +   M+  G++ D 
Sbjct: 220 CRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDV 279

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
            T  AL+ G CK      A  L   M   G +P++ +Y  L+D           L LL E
Sbjct: 280 VTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGE 339

Query: 469 FVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
            VSRG+ +D+ +Y AL+   CK+ K+D A+ +F     +    + V YT L  A  +AG 
Sbjct: 340 VVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGN 399

Query: 529 PKACSDILDDMYRRRLMITLKIYRSF 554
                 +L +M  + +   +  + S 
Sbjct: 400 VDGAEQVLSEMEEKSISPNVVTFSSI 425



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 109/440 (24%), Positives = 201/440 (45%), Gaps = 22/440 (5%)

Query: 83  TMIHILTKNKHFKSAQ----NMLEKIALRDFLSTPSVLNALVKIHDDPDG--------NS 130
           ++++ L KN   + A+     M E+  L D ++  ++++ L K  + P            
Sbjct: 494 SLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEK 553

Query: 131 HVLSWLVIF--YAN----LKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMV 184
           ++L   V++  + N    L  +++     ++M+   L P       ++ + +++  T   
Sbjct: 554 NLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKA 613

Query: 185 WKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIAL 244
            K+   M +  +  N+  Y+ LI    ++  V+K + LL EM          T+  ++  
Sbjct: 614 LKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQ- 672

Query: 245 YCKKGMHYE-ALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATP 301
            C +G   +  L + + M   G+  DI  YN+L+   C  G  R+A  +  ++  +G  P
Sbjct: 673 ACSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAP 732

Query: 302 NHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLL 361
           + +T+  LI G+ ++  L+ A    + M   G+ P V T+N++L  L   GRI +++ +L
Sbjct: 733 DTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVL 792

Query: 362 NEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKA 421
           NEM ++ I P N+T + L+  Y K  +   A+++   M+  G +    TY ALI  F K 
Sbjct: 793 NEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKV 852

Query: 422 KEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVY 481
             M  AKEL   M + G  P+ C+Y  LV G+    N   + K L +   +G        
Sbjct: 853 GMMSQAKELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFLKDMKEKGFSPSKGTL 912

Query: 482 RALIRRFCKKEKVDYAQRLF 501
            ++ R F K      A+RL 
Sbjct: 913 SSISRAFSKPGMSWEARRLL 932



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 100/423 (23%), Positives = 177/423 (41%), Gaps = 37/423 (8%)

Query: 123 HDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTD 182
            D  + N    +  ++ Y       D   ++++M    ++P +   + L+  L KD    
Sbjct: 237 RDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFS 296

Query: 183 MVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLI 242
             + ++++M ++G   N   Y +LI    K+   ++   LL E+  + V  DL  Y  L+
Sbjct: 297 EAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALM 356

Query: 243 ALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGAT 300
              CK+G   EA  +      +  +P+ VTY  LI   C+ G +  A ++  ++  K  +
Sbjct: 357 DWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSIS 416

Query: 301 PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTY------------------- 341
           PN VT++++I+G  +   + +A      M  +G+ P VVTY                   
Sbjct: 417 PNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDV 476

Query: 342 ----------------NSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
                           +S++  L K G+I  A  L  EMNE+ +  D+V   TLI+   K
Sbjct: 477 YHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFK 536

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            G+  +A KV   + E  L+ D   Y   I+  C   +   A+  L  M   G  P   +
Sbjct: 537 TGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVT 596

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+ ++     +      LKLL+      +  ++  Y  LI    +   V+ A+ L N M 
Sbjct: 597 YNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMS 656

Query: 506 GNG 508
            +G
Sbjct: 657 SSG 659


>gi|222640310|gb|EEE68442.1| hypothetical protein OsJ_26820 [Oryza sativa Japonica Group]
          Length = 621

 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 119/461 (25%), Positives = 213/461 (46%), Gaps = 16/461 (3%)

Query: 83  TMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWL------ 136
           T++  L +++ F   +++  ++  R+  +  +++NA     D P    H+ S L      
Sbjct: 46  TLLMALARHRMFPDMESLASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAP 105

Query: 137 --------VIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
                   V+ Y    M     +VF  M +   +      T LL+ L    +      V+
Sbjct: 106 DSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVF 165

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
             M       + H+Y  ++H  C++   ++ E LL E        ++  YN LI  YC  
Sbjct: 166 VGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNA 225

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTY 306
           G    AL V + M+    SP++ TY  LIHG C+ G++  A  LF  +   G  PN VTY
Sbjct: 226 GEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTY 285

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
           T LI G C    L+ A RL  +M   G+ P   T++ ++  LCK  ++ +A   L  + +
Sbjct: 286 TALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVK 345

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
           K +  + V   +LI+  CK G   +A ++  +M+  G + D  +Y +LI G C+ K++  
Sbjct: 346 KGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQ 405

Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
           A  +L  M++ G   S  +Y+ ++D    +   E   K+ D+ ++ G+  D+  Y   +R
Sbjct: 406 ATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVR 465

Query: 487 RFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
            +C++ +++ A+ +   M   G+  + V Y +L   Y   G
Sbjct: 466 SYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLG 506



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 121/455 (26%), Positives = 195/455 (42%), Gaps = 43/455 (9%)

Query: 162 MPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEK 221
           +P L     LL +LA+ R+   +  +  +M       N+  Y  LI+A C + D+   ++
Sbjct: 38  LPPLRCLNTLLMALARHRMFPDMESLASRMP----ARNLRTYTTLINAYCLAGDIPAAKQ 93

Query: 222 LLCEMEFKDVRADLFTYNTLIALYCKKGMHY----------------------------- 252
            L  +    +  D + Y + +  YC+ GM                               
Sbjct: 94  HLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLL 153

Query: 253 ------EALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHV 304
                 EA+AV   M  +  +PD   Y +++HG C  GR  EA  L  +    G  PN V
Sbjct: 154 GAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIV 213

Query: 305 TYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM 364
            Y  LIDGYC A ++E AL++ E M      P V TY  ++  LCK G++  A  L + M
Sbjct: 214 VYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRM 273

Query: 365 NEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEM 424
            E  + P+ VT   LI   C  G    A ++ + M   GL+ + +T+  LI   CK +++
Sbjct: 274 VEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKV 333

Query: 425 DIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRAL 484
           + A+  L  ++  G   +   Y+ L+DG C     +A  +L+ + +S G   D   Y +L
Sbjct: 334 EEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSL 393

Query: 485 IRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL 544
           I   C+++K+  A  +   M   GI    V YT +     R    +    I D M    +
Sbjct: 394 IDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGI 453

Query: 545 MITLKIYRSFSASYAKDNEILDL--FWSHVVDRGL 577
              +  Y  F  SY ++  + D       +VDRG+
Sbjct: 454 NPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGV 488



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 110/466 (23%), Positives = 198/466 (42%), Gaps = 46/466 (9%)

Query: 145 MTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYN 204
           M ++ + VF  MR  +  P  H    +++ L +   T+    + ++ +  G   NI +YN
Sbjct: 157 MVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYN 216

Query: 205 VLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMERE 264
            LI   C + +++   K+   M+      ++ TY  LI   CK G    A+ +  RM   
Sbjct: 217 ALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEA 276

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDI---------------------------- 296
           G+ P++VTY +LI G C EG ++ A RL   +                            
Sbjct: 277 GLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEA 336

Query: 297 ---------KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRK 347
                    KG   N V YT+LIDG C+   ++ A  L + M ++G  P   +Y+S++  
Sbjct: 337 QLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDG 396

Query: 348 LCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLD 407
           LC++ ++  A  +L +M EK I    VT   +I+   +   +    K+ ++M+  G+  D
Sbjct: 397 LCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPD 456

Query: 408 QFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLD 467
             TY   +  +C+   M+ A+ ++  M+D G  P+  +Y+ L+ GY N           +
Sbjct: 457 IVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFE 516

Query: 468 EFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF------NLMQGNGILGDSVIYTSLAY 521
             V +G   +   Y  L+R   KK   D +  ++      +L + N    D +++  L Y
Sbjct: 517 VMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQESN---YDEIVWKILIY 573

Query: 522 AYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDL 567
              + G     S +L  M       +  I    +      NE+ ++
Sbjct: 574 GLLQKGSVAEFSSLLSVMKEHGYQPSNTINAMITGEITVTNEVQEI 619


>gi|15234349|ref|NP_194530.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75208278|sp|Q9SUD8.1|PP340_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g28010
 gi|4455360|emb|CAB36770.1| putative protein [Arabidopsis thaliana]
 gi|7269655|emb|CAB79603.1| putative protein [Arabidopsis thaliana]
 gi|332660020|gb|AEE85420.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 704

 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 165/612 (26%), Positives = 262/612 (42%), Gaps = 65/612 (10%)

Query: 28  KLLNPNIASSLTSTAIHKVLLNLYNCCHI--PSLSCAFFKWAESAVPNYKHSLQSHWTMI 85
           KLLNP + S L + A  +    L + C    P L  A   + ++       +   +  M 
Sbjct: 22  KLLNPRVYSKLVN-AFSETETKLRSLCEDSNPQLKNAVSVFQQAVDSGSSLAFAGNNLMA 80

Query: 86  HILTKNKH---FKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYA- 141
            ++    H   F   + MLE     +F+S   +L   V++         +   L   +A 
Sbjct: 81  KLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAF 140

Query: 142 ---NLKMTQDGL----------QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
              N  +   GL           +  +MR ++LMP + +   ++    + +  +   ++ 
Sbjct: 141 NVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELA 200

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
            +M   G   ++  + +LI A CK+  +D+    L EM+F  + ADL  Y +LI  +C  
Sbjct: 201 NEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDC 260

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTY 306
           G      A+ D +   G SP  +TYN+LI GFC+ G+++EA  +F  +  +G  PN  TY
Sbjct: 261 GELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTY 320

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
           T LIDG C     +EAL+L  +M  K   P  VTYN I+ KLCK+G + DA  ++  M +
Sbjct: 321 TGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKK 380

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ--FTYKALIHGFCK---- 420
           ++  PDN+T N L+   C  GD   A K+   ML+     D    +Y ALIHG CK    
Sbjct: 381 RRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRL 440

Query: 421 -------------------------------AKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
                                          A +++ A EL   + D+    +  +Y+ +
Sbjct: 441 HQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAM 500

Query: 450 VDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGI 509
           +DG+C          LL +     L   V  Y  L+   CK+  +D A RLF  MQ +  
Sbjct: 501 IDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNN 560

Query: 510 LGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAK----DNEIL 565
             D V +  +     +AG+ K+   +L  M R  L   L  Y      + K    D  I 
Sbjct: 561 FPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAI- 619

Query: 566 DLFWSHVVDRGL 577
             F+  +VD G 
Sbjct: 620 -SFFDKMVDSGF 630



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 114/382 (29%), Positives = 179/382 (46%), Gaps = 13/382 (3%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N +  + L+     +  T++ LQ+ + M   +  P+     +++N L KD L     ++ 
Sbjct: 316 NVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIV 375

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKD---VRADLFTYNTLIALY 245
           + M +     +   YN+L+   C   D+D+  KLL  M  KD      D+ +YN LI   
Sbjct: 376 ELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLM-LKDSSYTDPDVISYNALIHGL 434

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGA--TPNH 303
           CK+   ++AL + D +  +  + D VT N L++   + G + +A  L++ I  +    N 
Sbjct: 435 CKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNS 494

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
            TYT +IDG+C+   L  A  L   M    + P V  YN +L  LCKEG +  A RL  E
Sbjct: 495 DTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEE 554

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
           M      PD V+ N +I+   K GD  SA  +   M  AGL  D FTY  LI+ F K   
Sbjct: 555 MQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGY 614

Query: 424 MDIAKELLFGMLDAGFSPS--YCSYSWLVDGYCNKNNE-EALLKLLDEFVSRGLCVDVSV 480
           +D A      M+D+GF P    C     V  YC    E + L +L+ + V + + +D  +
Sbjct: 615 LDEAISFFDKMVDSGFEPDAHICDS---VLKYCISQGETDKLTELVKKLVDKDIVLDKEL 671

Query: 481 YRALIRRFCKKE-KVDYAQRLF 501
              ++   C     +D A+RL 
Sbjct: 672 TCTVMDYMCNSSANMDLAKRLL 693



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 104/402 (25%), Positives = 180/402 (44%), Gaps = 4/402 (0%)

Query: 149 GLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIH 208
           G  +FD++      P       L+    K        ++++ M++ GV  N++ Y  LI 
Sbjct: 266 GKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLID 325

Query: 209 ACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISP 268
             C      +  +LL  M  KD   +  TYN +I   CK G+  +A+ + + M++    P
Sbjct: 326 GLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRP 385

Query: 269 DIVTYNSLIHGFCREGRMREARRLF----RDIKGATPNHVTYTTLIDGYCRANDLEEALR 324
           D +TYN L+ G C +G + EA +L     +D     P+ ++Y  LI G C+ N L +AL 
Sbjct: 386 DNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALD 445

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           + +++  K      VT N +L    K G +  A  L  ++++ KI  ++ T   +I+ +C
Sbjct: 446 IYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFC 505

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           K G    A  +  +M  + L    F Y  L+   CK   +D A  L   M      P   
Sbjct: 506 KTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVV 565

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
           S++ ++DG     + ++   LL      GL  D+  Y  LI RF K   +D A   F+ M
Sbjct: 566 SFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKM 625

Query: 505 QGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMI 546
             +G   D+ I  S+       GE    ++++  +  + +++
Sbjct: 626 VDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVL 667



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 88/355 (24%), Positives = 168/355 (47%), Gaps = 4/355 (1%)

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           L+  +  L   ++  ++F+ M    + P+++  T L++ L     T    ++   M++  
Sbjct: 288 LIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKD 347

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
              N   YN++I+  CK   V    +++  M+ +  R D  TYN L+   C KG   EA 
Sbjct: 348 EEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEAS 407

Query: 256 AVQDRMEREG--ISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLID 311
            +   M ++     PD+++YN+LIHG C+E R+ +A  ++  +  K    + VT   L++
Sbjct: 408 KLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLN 467

Query: 312 GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAP 371
              +A D+ +A+ L + ++   +     TY +++   CK G +  A  LL +M   ++ P
Sbjct: 468 STLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQP 527

Query: 372 DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
                N L+++ CK G    A ++   M       D  ++  +I G  KA ++  A+ LL
Sbjct: 528 SVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLL 587

Query: 432 FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
            GM  AG SP   +YS L++ +      +  +   D+ V  G   D  +  ++++
Sbjct: 588 VGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLK 642


>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
 gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
          Length = 698

 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 138/506 (27%), Positives = 233/506 (46%), Gaps = 40/506 (7%)

Query: 46  VLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIA 105
            ++ ++ C     L+   F+   S    ++HS+ +   ++ +  + K  + A N+L+   
Sbjct: 87  AVVKIFQCLKDADLAWELFQCLSSPRFGFQHSVHTGNALLDVFARTKRHREAGNLLK--- 143

Query: 106 LRDFLSTPSVLNALVKIHDDPDGNSHVLSW--LVIFYANLKMTQDGLQVFDQMRVH-NLM 162
                      N L  I   PD    V +W  L+  Y   +  ++   V  +M     + 
Sbjct: 144 -----------NELATIFR-PD----VETWNVLITGYCLAREPEEAFAVIREMEEDFGVA 187

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKM-----VQLGVVANIHLYNVLIHACCKSSDVD 217
           P L    ++L+ L K        KV   M     V+  +  +   +++LI+   K+  + 
Sbjct: 188 PSLKTHNLVLHGLCKS------GKVLAAMDHFEAVRRSMPVSAATFSILINGLVKAGMMI 241

Query: 218 KVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLI 277
           +   L  E        D+ TY  ++    K     EA+A+ +++   G +P I TYN+L+
Sbjct: 242 QAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALL 301

Query: 278 HGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVY 335
           +G C+ GR+ EA  L R I   G TP+ VTYT+LIDG  +     EA +L + MA++G+ 
Sbjct: 302 NGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLA 361

Query: 336 PGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKV 395
              V Y +++R L + G+I  A+ +   M      PD VT +T+I+   K G   +A+++
Sbjct: 362 LDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRI 421

Query: 396 KNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCN 455
              M   GL  ++  Y ALIHG CKA++MD A E+L  M  A  +P   +Y+ L+DG C 
Sbjct: 422 FKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCK 481

Query: 456 KNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVI 515
             + EA     DE +  G   DV  Y  LI   CK    D A  + + M  +       +
Sbjct: 482 SGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDMSSS-----RFV 536

Query: 516 YTSLAYAYWRAGEPKACSDILDDMYR 541
           Y+SL     ++G+ +    +  +M R
Sbjct: 537 YSSLVDGLCKSGKLEGGCMLFHEMER 562



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 144/525 (27%), Positives = 239/525 (45%), Gaps = 39/525 (7%)

Query: 21  MLKGHWAKLLNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQS 80
           +LK   A +  P++ +         VL+  Y     P  + A  +  E        SL++
Sbjct: 141 LLKNELATIFRPDVET-------WNVLITGYCLAREPEEAFAVIREMEEDF-GVAPSLKT 192

Query: 81  HWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFY 140
           H  ++H L K+    +A +  E +  R    + +  + L+        N  V + ++I  
Sbjct: 193 HNLVLHGLCKSGKVLAAMDHFEAVR-RSMPVSAATFSILI--------NGLVKAGMMIQA 243

Query: 141 ANL--KMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVA 198
            +L  + T +G  +            +H  T ++N LAK++       + +K+   G   
Sbjct: 244 HSLAQETTTNGCTI-----------DIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTP 292

Query: 199 NIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQ 258
            I  YN L++  CK   +++   LL ++       D+ TY +LI    K+   +EA  + 
Sbjct: 293 TIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLF 352

Query: 259 DRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRA 316
             M   G++ D V Y +LI G  + G++ +A  +++ +   G  P+ VT +T+IDG  +A
Sbjct: 353 KEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKA 412

Query: 317 NDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTC 376
             +  A+R+ + M A+G+ P  V Y++++  LCK  ++  A  +L +M +    PD +T 
Sbjct: 413 GRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITY 472

Query: 377 NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD 436
           N LI+  CK GD  +A    + MLEAG   D +TY  LI G CKA   D A     G+LD
Sbjct: 473 NILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAA----CGVLD 528

Query: 437 AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDY 496
              S S   YS LVDG C     E    L  E    G+    +  R LI   CK  +VD 
Sbjct: 529 -DMSSSRFVYSSLVDGLCKSGKLEGGCMLFHEMERSGVANSQTRTR-LIFHLCKANRVDE 586

Query: 497 AQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
           A  LFN ++  G +     Y S+  A  ++G+      +  +M R
Sbjct: 587 AVSLFNAIRKEG-MPHPYAYNSIISALIKSGKVNEGQAVYQEMTR 630



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 94/377 (24%), Positives = 164/377 (43%), Gaps = 39/377 (10%)

Query: 182 DMVWKVYKKM--VQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYN 239
           D+ W++++ +   + G   ++H  N L+    ++    +   LL        R D+ T+N
Sbjct: 99  DLAWELFQCLSSPRFGFQHSVHTGNALLDVFARTKRHREAGNLLKNELATIFRPDVETWN 158

Query: 240 TLIALYCKKGMHYEALAVQDRMERE-GISPDIVTYNSLIHGFCREGRMREARRLFRDIKG 298
            LI  YC      EA AV   ME + G++P + T+N ++HG C+ G++  A   F  ++ 
Sbjct: 159 VLITGYCLAREPEEAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMDHFEAVRR 218

Query: 299 ATP-NHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDA 357
           + P +  T++ LI+G  +A  + +A  L +     G    + TY +I+  L K  +I++A
Sbjct: 219 SMPVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEA 278

Query: 358 NRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHG 417
             L+ ++      P   T                                   Y AL++G
Sbjct: 279 VALMEKITANGCTPTIAT-----------------------------------YNALLNG 303

Query: 418 FCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVD 477
            CK   ++ A +LL  ++D G +P   +Y+ L+DG   +       KL  E  SRGL +D
Sbjct: 304 LCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALD 363

Query: 478 VSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILD 537
              Y ALIR   +  K+  A  ++  M  +G + D V  +++     +AG   A   I  
Sbjct: 364 TVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFK 423

Query: 538 DMYRRRLMITLKIYRSF 554
            M  R L     +Y + 
Sbjct: 424 SMEARGLAPNEVVYSAL 440



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 85/291 (29%), Positives = 131/291 (45%), Gaps = 6/291 (2%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
            V+  M  H  +P +   + +++ L+K        +++K M   G+  N  +Y+ LIH  
Sbjct: 385 SVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGL 444

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           CK+  +D   ++L +M+      D  TYN LI   CK G    A A  D M   G  PD+
Sbjct: 445 CKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDV 504

Query: 271 VTYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMA 330
            TYN LI G C+ G    A  +  D+   + +   Y++L+DG C++  LE    L   M 
Sbjct: 505 YTYNILISGLCKAGNTDAACGVLDDM---SSSRFVYSSLVDGLCKSGKLEGGCMLFHEME 561

Query: 331 AKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTA 390
             GV     T   ++  LCK  R+ +A  L N + ++ + P     N++I+A  K G   
Sbjct: 562 RSGV-ANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGM-PHPYAYNSIISALIKSGKVN 619

Query: 391 SAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
               V   M       D+ TY AL++G   A  MD A      M   G+ P
Sbjct: 620 EGQAVYQEMTR-WWKPDRVTYNALLNGMIGANRMDRAHYYYLEMTGRGYVP 669


>gi|224132422|ref|XP_002328265.1| predicted protein [Populus trichocarpa]
 gi|222837780|gb|EEE76145.1| predicted protein [Populus trichocarpa]
          Length = 742

 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 126/463 (27%), Positives = 210/463 (45%), Gaps = 55/463 (11%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D  ++FD+M      P+ ++  +L+    +   T    ++  +M +LG   N  +YN LI
Sbjct: 74  DARELFDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLI 133

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI- 266
            + CK    D  EKL+ EM    +  D+ T+N  I+  C  G   EA  +   M+ + + 
Sbjct: 134 SSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVL 193

Query: 267 ---SPDIVTYNSLIHGFCREGRMREARRLFRDIK-------------------------- 297
               P+I+TYN ++ GFC+EG + EAR LF  +K                          
Sbjct: 194 GLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLE 253

Query: 298 -----------GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILR 346
                      G  PN  +Y  ++DG C+   L +A  L  +M + GV P  VTY ++L 
Sbjct: 254 AQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLH 313

Query: 347 KLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLML 406
             C  G++ +AN +L EM     +P+N TCN L+ +  K G  + A ++  +M E G ++
Sbjct: 314 GYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVI 373

Query: 407 DQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLL 466
           D  T   +I G C   ++D A E++ GM             W        N   + + L+
Sbjct: 374 DTVTCNIVIDGLCNNGKLDKAIEIVNGM-------------WTHGSAALGNLGNSYIGLV 420

Query: 467 DEFVSRGLCV-DVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWR 525
           D+  SR  C+ D+  Y  +I   CK  +V  A++ F  M G  +  DS IY    +++ +
Sbjct: 421 DDSDSRKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCK 480

Query: 526 AGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLF 568
            G+  +   +L DM ++    TL+ Y S        N+I +++
Sbjct: 481 EGKISSAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIY 523



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 108/404 (26%), Positives = 185/404 (45%), Gaps = 27/404 (6%)

Query: 126 PDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRV-HNLMPHLHACTVLLNSLAKDRLTDMV 184
           P  N    + ++  +    M ++   +F++M+V  NLM        LL  +   +L +  
Sbjct: 196 PQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLE-A 254

Query: 185 WKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIAL 244
             V K+MV +G+  N++ YN+++   CK+  +     L+  M    V  D  TY TL+  
Sbjct: 255 QLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHG 314

Query: 245 YCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPN 302
           YC  G   EA  V   M R+G SP+  T N L++   +EGR+ EA  L + +  KG   +
Sbjct: 315 YCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVID 374

Query: 303 HVTYTTLIDGYCRANDLEEALRLREVM-----------------------AAKGVYPGVV 339
            VT   +IDG C    L++A+ +   M                       + K   P ++
Sbjct: 375 TVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLI 434

Query: 340 TYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRM 399
           +Y++I+  LCK GR+ +A +   EM  K + PD+   +  I+++CK G  +SA +V   M
Sbjct: 435 SYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKDM 494

Query: 400 LEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNE 459
            + G      TY +LI G     ++     L+  M + G SP    Y+ ++   C     
Sbjct: 495 EKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEGGRV 554

Query: 460 EALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNL 503
           +    +LDE + +G+  ++S +  LI+ FCK         +F +
Sbjct: 555 KDAPSVLDEMLQKGISPNISSFSILIKAFCKACDFSAVDEIFEI 598



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 103/396 (26%), Positives = 171/396 (43%), Gaps = 62/396 (15%)

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
           Y +     +   V  +M      P+ + C +LL SL K+       ++ +KM + G V +
Sbjct: 315 YCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVID 374

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEM-----------------------EFKDVRADLF 236
               N++I   C +  +DK  +++  M                         K    DL 
Sbjct: 375 TVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLI 434

Query: 237 TYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI 296
           +Y+T+I+  CK G   EA      M  + + PD   Y+  IH FC+EG++  A R+ +D+
Sbjct: 435 SYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKDM 494

Query: 297 --KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRI 354
             KG      TY +LI G    N + E   L + M  +GV P V  YN++L  LC+ GR+
Sbjct: 495 EKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEGGRV 554

Query: 355 RDANRLLNEMNEKKIAPDNVTCNTLINAYCKI---------------------------- 386
           +DA  +L+EM +K I+P+  + + LI A+CK                             
Sbjct: 555 KDAPSVLDEMLQKGISPNISSFSILIKAFCKACDFSAVDEIFEIALNVCGHKEALYSLTF 614

Query: 387 ------GDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFS 440
                 G+   A ++    L+    +  F YK LI   CK +++D A  +L  ++D G+ 
Sbjct: 615 NELLVGGEVVKAKELFETALDRSFDVGNFLYKDLIDHLCKDEKLDDASGILHKLIDKGYW 674

Query: 441 PSYCSYSWLVDGY---CNKNNEEALLKLLDEFVSRG 473
               S+  ++DG     NK+  + L + + E  S G
Sbjct: 675 FDPASFMPVIDGLGKRGNKHEADELAEKMMEMASEG 710



 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 88/176 (50%)

Query: 336 PGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKV 395
           P +  YN +LR   KEGR+   + L  +M    ++P+  T N LI   C  G    A ++
Sbjct: 19  PSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDAREL 78

Query: 396 KNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCN 455
            ++M E G   +++++  L+ G+C+A       ELL  M   GFSP+   Y+ L+  +C 
Sbjct: 79  FDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCK 138

Query: 456 KNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILG 511
           +   +   KL+DE    GL  DV  + A I   C   KV  A R+F  MQ + +LG
Sbjct: 139 EGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLG 194


>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
 gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
          Length = 457

 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 113/358 (31%), Positives = 171/358 (47%), Gaps = 2/358 (0%)

Query: 171 LLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKD 230
           LL  LAK    D V+  Y  M+  G V N + Y  L+ + C++   ++   +   M  + 
Sbjct: 23  LLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQG 82

Query: 231 VRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREAR 290
              ++F+Y+ LIA  C+     EA  + + M   G  P++VTY SL+ G C+ G+++EA 
Sbjct: 83  CSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAV 142

Query: 291 RLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
            LF  +  +G  P+ V Y  LIDG+ +  D+ EA RL E M  KG  P V TYNS+L   
Sbjct: 143 DLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGF 202

Query: 349 CKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ 408
            ++G       L  +M  +   P+  T N L++ +CK+GD   A ++   M   G   D 
Sbjct: 203 SRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDV 262

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
            +Y  L+ G C   +   A+ LL  M+ +G  P   SY+ L+DGY      +  +KL  E
Sbjct: 263 VSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYE 322

Query: 469 FVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRA 526
               GL  D   Y  +I   C+  KV  A  +F  M  NG   D+ +   L     R 
Sbjct: 323 IPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRG 380



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 127/459 (27%), Positives = 209/459 (45%), Gaps = 26/459 (5%)

Query: 62  AFFKWAESAVPNYKHSLQSHWTMIHILTKNK---HFKSAQNMLEKIALRDFLSTPSVLNA 118
           AFF+WA S V +Y H   S+  ++ +L K+    H     N        D L    V N 
Sbjct: 2   AFFQWAGSQV-HYNHGTLSYNYLLEVLAKSGRCDHVYGTYN--------DMLGAGCVPN- 51

Query: 119 LVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKD 178
                      ++   +L+      +  ++   VF  M      P++ + ++L+  L + 
Sbjct: 52  -----------TYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRG 100

Query: 179 RLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTY 238
           +  D   ++  +M+  G   N+  Y  L+   CK   + +   L   M ++    D   Y
Sbjct: 101 QKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVY 160

Query: 239 NTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI-- 296
           N LI  + KKG   EA  + + M  +G  P + TYNSL+ GF R+G     + LF+D+  
Sbjct: 161 NVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLR 220

Query: 297 KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRD 356
           +G  PN  T+  L+DG+C+  D+ EA RL   M + G  P VV+YN+++R +C +G+  +
Sbjct: 221 QGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHE 280

Query: 357 ANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIH 416
           A RLL EM    + PD V+ N LI+ Y K G    A+K+   + ++GL  D F+Y  +I 
Sbjct: 281 AQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIID 340

Query: 417 GFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCV 476
             C+A ++  A  +   M+  G +P       LV G C         +L    V      
Sbjct: 341 CLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVP 400

Query: 477 DVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVI 515
            +  Y  L+ + CK ++ D    +F+ +   G   D  I
Sbjct: 401 LIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEI 439



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 100/294 (34%), Positives = 144/294 (48%), Gaps = 2/294 (0%)

Query: 236 FTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD 295
            +YN L+ +  K G         + M   G  P+  TY  L+   C+  R  EAR +FR 
Sbjct: 18  LSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRG 77

Query: 296 I--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGR 353
           +  +G +PN  +Y+ LI G CR   ++EA  L   M   G  P VVTY S+L  LCK G+
Sbjct: 78  MAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGK 137

Query: 354 IRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKA 413
           +++A  L + M  +   PD V  N LI+ + K GD   A ++   MLE G +   FTY +
Sbjct: 138 LKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNS 197

Query: 414 LIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
           L+ GF +  E    + L   ML  G  P+  +++ L+DG+C   +     +L  E  S G
Sbjct: 198 LLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLG 257

Query: 474 LCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
              DV  Y  L+R  C K K   AQRL   M  +G+  D V Y  L   Y ++G
Sbjct: 258 CPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSG 311



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 105/339 (30%), Positives = 164/339 (48%), Gaps = 2/339 (0%)

Query: 203 YNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRME 262
           YN L+    KS   D V     +M       + +TY  L+   C+     EA +V   M 
Sbjct: 20  YNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMA 79

Query: 263 REGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLE 320
            +G SP++ +Y+ LI G CR  ++ EA  L  ++   G  PN VTY +L+ G C+   L+
Sbjct: 80  AQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLK 139

Query: 321 EALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLI 380
           EA+ L   M  +G  P  V YN ++    K+G + +A RL  EM EK   P   T N+L+
Sbjct: 140 EAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLL 199

Query: 381 NAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFS 440
           + + + G+      +   ML  G + + FT+  L+ GFCK  +M  A  L   M   G  
Sbjct: 200 SGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCP 259

Query: 441 PSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRL 500
           P   SY+ L+ G C+K       +LL E +  G+  D+  Y  LI  + K   +D+A +L
Sbjct: 260 PDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKL 319

Query: 501 FNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
           F  +  +G+  D+  Y+++     RAG+  A   +  DM
Sbjct: 320 FYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDM 358



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 88/304 (28%), Positives = 143/304 (47%), Gaps = 5/304 (1%)

Query: 271 VTYNSLIHGFCREGRMREARRLFRDIKGA--TPNHVTYTTLIDGYCRANDLEEALRLREV 328
           ++YN L+    + GR       + D+ GA   PN  TY  L+   C+A   EEA  +   
Sbjct: 18  LSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRG 77

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           MAA+G  P V +Y+ ++  LC+  ++ +A  LLNEM +    P+ VT  +L++  CK+G 
Sbjct: 78  MAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGK 137

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
              A+ + +RM+  G   D   Y  LI GF K  +M  A  L   ML+ G  P+  +Y+ 
Sbjct: 138 LKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNS 197

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG 508
           L+ G+  K     +  L  + + +G   ++  +  L+  FCK   +  A RLF  M+  G
Sbjct: 198 LLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLG 257

Query: 509 ILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI---L 565
              D V Y +L       G+P     +L +M R  +   +  Y      Y+K   +   +
Sbjct: 258 CPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAI 317

Query: 566 DLFW 569
            LF+
Sbjct: 318 KLFY 321



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 81/305 (26%), Positives = 144/305 (47%), Gaps = 4/305 (1%)

Query: 126 PDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVW 185
           PDG   V + L+  ++      +  ++F++M     +P +     LL+  ++      V 
Sbjct: 155 PDGV--VYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQ 212

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
            ++K M++ G V NI  +N L+   CK  D+ +  +L  EM       D+ +YNTL+   
Sbjct: 213 SLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGM 272

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNH 303
           C KG  +EA  +   M R G+ PDIV+YN LI G+ + G +  A +LF +I   G  P+ 
Sbjct: 273 CSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDA 332

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
            +Y+T+ID  CRA  +  A  + + M A G  P       ++  LC+  R+ ++  L   
Sbjct: 333 FSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQA 392

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
           M + +  P     N L+   CK   +    ++ + + E G   D    K ++    ++ +
Sbjct: 393 MVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETLRRSDD 452

Query: 424 MDIAK 428
            + A+
Sbjct: 453 KEAAE 457



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 99/230 (43%)

Query: 337 GVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVK 396
           G ++YN +L  L K GR        N+M      P+  T   L+ + C+      A  V 
Sbjct: 16  GTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVF 75

Query: 397 NRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNK 456
             M   G   + F+Y  LI G C+ +++D A ELL  M+D G  P+  +Y  L+ G C  
Sbjct: 76  RGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKM 135

Query: 457 NNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIY 516
              +  + L    V RG   D  VY  LI  F KK  +  A RLF  M   G +     Y
Sbjct: 136 GKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTY 195

Query: 517 TSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
            SL   + R GE      +  DM R+  +  +  + +    + K  ++++
Sbjct: 196 NSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVE 245


>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 504

 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 120/378 (31%), Positives = 190/378 (50%), Gaps = 2/378 (0%)

Query: 191 MVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGM 250
           MVQ   + +I  ++ L+ A  K    D V  L  +M+   +  +L T N L+  +C+   
Sbjct: 72  MVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQ 131

Query: 251 HYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTT 308
              AL+   +M + G  PDIVT+ SL++GFCR  R+ +A  +F  +   G  PN V Y T
Sbjct: 132 LSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNT 191

Query: 309 LIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKK 368
           +IDG C++  ++ AL L   M   G+ P  VTYNS++  LC  GR  DA R+++ M +++
Sbjct: 192 IIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKRE 251

Query: 369 IAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAK 428
           I PD  T N LI+A  K G  + A ++   M+   L  D  TY  LI+G C    +D A+
Sbjct: 252 IYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAE 311

Query: 429 ELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRF 488
           ++   M+  G  P   +YS L++GYC     E  +KL  E   RG+  +   Y  LI+ +
Sbjct: 312 QMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGY 371

Query: 489 CKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITL 548
           C+  K++ A+ +F  M   G+  + + Y  L +     G+ +    IL DM +  +   +
Sbjct: 372 CRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADI 431

Query: 549 KIYRSFSASYAKDNEILD 566
             Y        K  E+ D
Sbjct: 432 VTYNIIIRGMCKAGEVAD 449



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 115/417 (27%), Positives = 202/417 (48%), Gaps = 37/417 (8%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D L +F  M     +P +   + LL++++K +  D+V  ++++M  LG+  N+   N+L+
Sbjct: 64  DSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILL 123

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           +  C+ S +      L +M       D+ T+ +L+  +C+    Y+AL + DRM   G  
Sbjct: 124 NCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYE 183

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFR--DIKGATPNHVTYTTLIDGYCRANDLEEALRL 325
           P++V YN++I G C+  ++  A  L    ++ G  P+ VTY +LI G C +   ++A R+
Sbjct: 184 PNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRM 243

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVT---------- 375
              M  + +YP V T+N+++    KEGRI +A  L  EM  + + PD VT          
Sbjct: 244 VSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCM 303

Query: 376 ------------------C-------NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
                             C       + LIN YCK       MK+   M + G++ +  T
Sbjct: 304 YSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVT 363

Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFV 470
           Y  LI G+C+A ++++A+E+   M+  G  P+  +Y+ L+ G C+    E  L +L +  
Sbjct: 364 YTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQ 423

Query: 471 SRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
             G+  D+  Y  +IR  CK  +V  A  L+  +   G+  D   YT++    ++ G
Sbjct: 424 KSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKG 480



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 109/351 (31%), Positives = 178/351 (50%), Gaps = 4/351 (1%)

Query: 163 PHLHACTVLLNSLAK-DRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEK 221
           P +     LLN   + DR+ D ++ ++ +MV++G   N+ +YN +I   CKS  VD    
Sbjct: 149 PDIVTFGSLLNGFCRGDRIYDALY-MFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALD 207

Query: 222 LLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFC 281
           LL  ME   +R D  TYN+LI+  C  G   +A  +   M +  I PD+ T+N+LI    
Sbjct: 208 LLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACV 267

Query: 282 REGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVV 339
           +EGR+ EA  L+ ++  +   P+ VTY+ LI G C  + L+EA ++   M +KG +P VV
Sbjct: 268 KEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVV 327

Query: 340 TYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRM 399
           TY+ ++   CK  ++    +L  EM+++ +  + VT   LI  YC+ G    A ++   M
Sbjct: 328 TYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWM 387

Query: 400 LEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNE 459
           +  G+  +  TY  L+HG C   +++ A  +L  M  +G      +Y+ ++ G C     
Sbjct: 388 VFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEV 447

Query: 460 EALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGIL 510
                L      +GL  D+  Y A++    KK     A  LF  M+ +GIL
Sbjct: 448 ADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEADALFRKMKEDGIL 498



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 102/360 (28%), Positives = 177/360 (49%), Gaps = 7/360 (1%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           S L  ++K+  +PD        L+  +       D L +FD+M      P++     +++
Sbjct: 137 SFLGKMMKLGHEPD--IVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIID 194

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
            L K +  D    +  +M   G+  +   YN LI   C S   D   +++  M  +++  
Sbjct: 195 GLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYP 254

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           D+FT+N LI    K+G   EA  + + M R  + PDIVTY+ LI+G C   R+ EA ++F
Sbjct: 255 DVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMF 314

Query: 294 RDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
             +  KG  P+ VTY+ LI+GYC++  +E  ++L   M+ +GV    VTY  +++  C+ 
Sbjct: 315 GFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRA 374

Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
           G++  A  +   M    + P+ +T N L++  C  G    A+ +   M ++G+  D  TY
Sbjct: 375 GKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTY 434

Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNK---NNEEALLKLLDE 468
             +I G CKA E+  A +L   +   G +P   +Y+ ++ G   K      +AL + + E
Sbjct: 435 NIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEADALFRKMKE 494



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 94/303 (31%), Positives = 147/303 (48%), Gaps = 2/303 (0%)

Query: 144 KMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLY 203
           K   + L + ++M V  + P       L++ L      D   ++   M +  +  ++  +
Sbjct: 200 KQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTF 259

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER 263
           N LI AC K   + + E+L  EM  + +  D+ TY+ LI   C      EA  +   M  
Sbjct: 260 NALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVS 319

Query: 264 EGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEE 321
           +G  PD+VTY+ LI+G+C+  ++    +LF ++  +G   N VTYT LI GYCRA  L  
Sbjct: 320 KGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNV 379

Query: 322 ALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
           A  + + M   GV P ++TYN +L  LC  G+I  A  +L +M +  +  D VT N +I 
Sbjct: 380 AEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIR 439

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
             CK G+ A A  +   +   GL  D +TY A++ G  K      A  L   M + G  P
Sbjct: 440 GMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEADALFRKMKEDGILP 499

Query: 442 SYC 444
           + C
Sbjct: 500 NEC 502



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 91/172 (52%), Gaps = 2/172 (1%)

Query: 134 SWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQ 193
           S L+  Y   K  + G+++F +M    ++ +    TVL+    +    ++  +++K MV 
Sbjct: 330 SILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVF 389

Query: 194 LGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYE 253
            GV  NI  YNVL+H  C +  ++K   +L +M+   + AD+ TYN +I   CK G   +
Sbjct: 390 CGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVAD 449

Query: 254 ALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNH 303
           A  +   +  +G++PDI TY +++ G  ++G   EA  LFR +K  G  PN 
Sbjct: 450 AWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEADALFRKMKEDGILPNE 501



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 57/239 (23%), Positives = 106/239 (44%)

Query: 306 YTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMN 365
           Y  ++    R   L+++L L   M      P +  ++ +L  + K  +      L  +M 
Sbjct: 49  YREMLRNGIRYMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQ 108

Query: 366 EKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMD 425
              I  +  TCN L+N +C+    + A+    +M++ G   D  T+ +L++GFC+   + 
Sbjct: 109 MLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIY 168

Query: 426 IAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
            A  +   M++ G+ P+   Y+ ++DG C     +  L LL+     G+  D   Y +LI
Sbjct: 169 DALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLI 228

Query: 486 RRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL 544
              C   + D A R+ + M    I  D   + +L  A  + G      ++ ++M RR L
Sbjct: 229 SGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSL 287



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 53/234 (22%), Positives = 104/234 (44%)

Query: 331 AKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTA 390
           ++  Y G   Y  +LR   +  ++ D+  L   M + +  P     + L++A  K+    
Sbjct: 39  SRRAYSGGSDYREMLRNGIRYMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYD 98

Query: 391 SAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLV 450
             + +  +M   G+  +  T   L++ FC+  ++ +A   L  M+  G  P   ++  L+
Sbjct: 99  VVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLL 158

Query: 451 DGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGIL 510
           +G+C  +     L + D  V  G   +V +Y  +I   CK ++VD A  L N M+ +GI 
Sbjct: 159 NGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIR 218

Query: 511 GDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
            D+V Y SL      +G     + ++  M +R +   +  + +   +  K+  I
Sbjct: 219 PDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRI 272


>gi|225454948|ref|XP_002277434.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Vitis vinifera]
          Length = 835

 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 118/392 (30%), Positives = 194/392 (49%), Gaps = 38/392 (9%)

Query: 169 TVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEF 228
           T L++ L K  + +    +++ +++  +V N   Y+ LI   CK  DV+K E LL EME 
Sbjct: 196 TALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEE 255

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFC------- 281
           K +  ++  Y++++  Y KKG+  EA+ V  +M +  I P++  Y +LI G+        
Sbjct: 256 KHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGI 315

Query: 282 ----------------------------REGRMREARRLFRDI--KGATPNHVTYTTLID 311
                                       R GRM EA  LF+D+  +G  P+ V YT+++D
Sbjct: 316 ALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMD 375

Query: 312 GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAP 371
           G+ +A    +A  + + M  K     VV YN ++  L K G+  ++      M +  +AP
Sbjct: 376 GFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKY-ESESFHTGMRQLGLAP 434

Query: 372 DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
           D+ T NT+INAYCK G+  +A+K+ N M   GL  +  T   L+   C A E++   +LL
Sbjct: 435 DSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLL 494

Query: 432 FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
             ML  GF P+  ++  ++D        + +L + D+ V  G+ +D+S Y  LI  FC+ 
Sbjct: 495 NDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRL 554

Query: 492 EKVDYAQRLFNLMQGNGILGDSVIYTSLAYAY 523
             +  A  +F  M G GIL D + Y +L + Y
Sbjct: 555 GMIRRATLVFKDMMGKGILADIITYNALIHGY 586



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 113/365 (30%), Positives = 193/365 (52%), Gaps = 18/365 (4%)

Query: 230 DVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA 289
           ++R  +  +N LI  YC+ G    A+ + + M+ EG +PDIVTYN+L++GFC+ G +  A
Sbjct: 12  EIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTA 71

Query: 290 RRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRK 347
           ++L  +I      PN +TYTTLID YC++  LE+AL + + M  K + P VVTY  I+  
Sbjct: 72  KKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNG 131

Query: 348 LCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLD 407
           LCK G++ +A  +  EM E  + P+  +  TLI++  K G+ A A  ++ RM+  G+  D
Sbjct: 132 LCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFD 191

Query: 408 QFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLD 467
              Y AL+ G  KA   + A+++   +L+    P+  +YS L+DG+C   +      LL 
Sbjct: 192 VVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQ 251

Query: 468 EFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
           E   + +  +V VY +++  + KK  ++ A  +   M    IL +  +Y +L   Y++A 
Sbjct: 252 EMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKAD 311

Query: 528 EPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSK--HIFKE 585
           +     D+  +M  R L               ++N ++D F +++   G M +   +FK+
Sbjct: 312 QRGIALDLFKEMKSRGL--------------EENNFVIDSFVNNLKRSGRMEEADELFKD 357

Query: 586 MQLRN 590
           M  R 
Sbjct: 358 MMSRG 362



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 104/375 (27%), Positives = 190/375 (50%), Gaps = 2/375 (0%)

Query: 170 VLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFK 229
           VL++   ++       ++ + M   G   +I  YN L++  CK  D+   +KL+ E+   
Sbjct: 22  VLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISLV 81

Query: 230 DVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA 289
           ++  ++ TY TLI  YCK     +AL + D M  + + PD+VTY  +++G C+ G++ EA
Sbjct: 82  NLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEA 141

Query: 290 RRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRK 347
           + +FR+++  G  PN  +Y TLID   +  ++ EA  L+  M  +G+   VV Y +++  
Sbjct: 142 KSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDG 201

Query: 348 LCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLD 407
           L K G   +A  +   + E+ + P+ VT + LI+ +CK+GD      +   M E  +  +
Sbjct: 202 LFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPN 261

Query: 408 QFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLD 467
              Y +++ G+ K   ++ A +++  M+     P+   Y  L+DGY   +     L L  
Sbjct: 262 VIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFK 321

Query: 468 EFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
           E  SRGL  +  V  + +    +  +++ A  LF  M   G+L D V YTS+   +++AG
Sbjct: 322 EMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAG 381

Query: 528 EPKACSDILDDMYRR 542
           +     +I  +M  +
Sbjct: 382 KESDAFNIAQEMTEK 396



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 113/488 (23%), Positives = 210/488 (43%), Gaps = 56/488 (11%)

Query: 72  PNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALR----DFLSTPSVLNALVKIHD--- 124
           P  + S++    +I    +N     A  +LE +       D ++  +++N   KI D   
Sbjct: 11  PEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFT 70

Query: 125 -----------DPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
                      + + N    + L+  Y   +  +D L ++D+M V +L+P +   T ++N
Sbjct: 71  AKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMN 130

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
            L K    +    V+++M ++GVV N   Y  LI +  K  +V +   L   M  + +  
Sbjct: 131 GLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGF 190

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           D+  Y  L+    K GM   A  +   +  E + P+ VTY++LI G C+ G + +   L 
Sbjct: 191 DVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLL 250

Query: 294 RDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTY---------- 341
           +++  K   PN + Y++++DGY +   L EA+ +   M  + + P V  Y          
Sbjct: 251 QEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKA 310

Query: 342 -------------------------NSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTC 376
                                    +S +  L + GR+ +A+ L  +M  + + PD V  
Sbjct: 311 DQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNY 370

Query: 377 NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD 436
            ++++ + K G  + A  +   M E     D   Y  LI+G  K  + + ++    GM  
Sbjct: 371 TSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYE-SESFHTGMRQ 429

Query: 437 AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDY 496
            G +P   +++ +++ YC + N    LKLL+E  S GL  +      L++R C   +++ 
Sbjct: 430 LGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEK 489

Query: 497 AQRLFNLM 504
              L N M
Sbjct: 490 TMDLLNDM 497



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 104/392 (26%), Positives = 178/392 (45%), Gaps = 6/392 (1%)

Query: 139 FYANLKMT---QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           F  NLK +   ++  ++F  M    L+P     T +++   K       + + ++M +  
Sbjct: 338 FVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKS 397

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
              ++  YNVLI+   K    +  E     M    +  D  T+NT+I  YCK+G    AL
Sbjct: 398 SGFDVVAYNVLINGLFKLGKYES-ESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNAL 456

Query: 256 AVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGY 313
            + + M+  G+ P+ +T N L+   C  G + +   L  D  + G  P   T+  ++D  
Sbjct: 457 KLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDAS 516

Query: 314 CRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDN 373
            ++   +  L + + +   GV   + TYN+++   C+ G IR A  +  +M  K I  D 
Sbjct: 517 SKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADI 576

Query: 374 VTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFG 433
           +T N LI+ YC       A  V ++ML  G+  +  TY  L+ G   A+ +  A  L+  
Sbjct: 577 ITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQ 636

Query: 434 MLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEK 493
           M + G  P+  +Y  LV G+    N +  +KL  E +++G       Y  LI  F K +K
Sbjct: 637 MKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKK 696

Query: 494 VDYAQRLFNLMQGNGILGDSVIYTSLAYAYWR 525
           +  A+ L   MQ  GI  +S  Y  L   +++
Sbjct: 697 MSQAKELMQEMQVRGIPPNSSTYDILICGWYK 728



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 101/464 (21%), Positives = 207/464 (44%), Gaps = 15/464 (3%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N  V S +V  Y    +  + + V  +M   N++P++     L++   K     +   ++
Sbjct: 261 NVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLF 320

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
           K+M   G+  N  + +  ++   +S  +++ ++L  +M  + +  D   Y +++  + K 
Sbjct: 321 KEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKA 380

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTY 306
           G   +A  +   M  +    D+V YN LI+G  + G+  E+      ++  G  P+  T+
Sbjct: 381 GKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKY-ESESFHTGMRQLGLAPDSATF 439

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
            T+I+ YC+  +L  AL+L   M + G+ P  +T N ++++LC  G I     LLN+M  
Sbjct: 440 NTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLV 499

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
               P   T   +++A  K       + + ++++  G+ LD  TY  LI  FC+   +  
Sbjct: 500 MGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRR 559

Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
           A  +   M+  G      +Y+ L+ GYC  ++ +    +  + ++ G+  +V  Y  L+ 
Sbjct: 560 ATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLG 619

Query: 487 RFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMI 546
                  +  A  L N M+  G++ ++  Y  L   + + G  K C  +  +M  +  + 
Sbjct: 620 GLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVP 679

Query: 547 TLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKEMQLRN 590
             + Y    + +AK  ++              +K + +EMQ+R 
Sbjct: 680 KTRTYNVLISCFAKGKKMSQ------------AKELMQEMQVRG 711



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 130/270 (48%), Gaps = 4/270 (1%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           + + + M V    P       +L++ +K R  D++  ++ ++V +GV  ++  YN LI  
Sbjct: 491 MDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLIST 550

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
            C+   + +   +  +M  K + AD+ TYN LI  YC      +A AV  +M  EG+SP+
Sbjct: 551 FCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPN 610

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLRE 327
           + TYN L+ G      ++EA  L   +K  G  PN  TY  L+ G+ +  +++E ++L  
Sbjct: 611 VETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYC 670

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
            M  KG  P   TYN ++    K  ++  A  L+ EM  + I P++ T + LI  + K+ 
Sbjct: 671 EMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLS 730

Query: 388 DTASAMKVKNR--MLEAGLMLDQFTYKALI 415
                 K   R    EA  + ++   K  I
Sbjct: 731 KQPELNKSLKRSYQAEAKRLFEEMNEKGFI 760



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 112/251 (44%), Gaps = 14/251 (5%)

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           L+  +  L M +    VF  M    ++  +     L++           + V+ +M+  G
Sbjct: 547 LISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEG 606

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
           V  N+  YN+L+     +  + +   L+ +M+ + +  +  TY+ L++ + K G   E +
Sbjct: 607 VSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECV 666

Query: 256 AVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGY 313
            +   M  +G  P   TYN LI  F +  +M +A+ L ++  ++G  PN  TY  LI G+
Sbjct: 667 KLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGW 726

Query: 314 CRANDLEE------------ALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLL 361
            + +   E            A RL E M  KG  P   T   I   L K G+  DA R+L
Sbjct: 727 YKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIPCENTLACISFTLAKPGKKADAQRIL 786

Query: 362 NEMNEKKIAPD 372
           N++ +KK   +
Sbjct: 787 NKLYKKKTVQE 797


>gi|15219974|ref|NP_173709.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806406|sp|P0C7Q9.1|PPR56_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g22960, mitochondrial; Flags: Precursor
 gi|332192194|gb|AEE30315.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 718

 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 141/567 (24%), Positives = 240/567 (42%), Gaps = 108/567 (19%)

Query: 57  PSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVL 116
           P ++  FF W +    + K S Q+   M+ IL +N     A  + E+      L    + 
Sbjct: 99  PEIAFRFFNWIQRQ-SDVKQSRQAFAAMLEILAENDLMSEAYLVAERSID---LGMHEID 154

Query: 117 NALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLA 176
           + L+    D      +L  L+  Y    M +  L  F++M     +P +  C ++L  L 
Sbjct: 155 DLLIDGSFDKLIALKLLDLLLWVYTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLR 214

Query: 177 KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEM-----EFKDV 231
             R+ +    VY+ M++ G++  +  +N ++ +C K+ D+++V+K+  EM     EF +V
Sbjct: 215 DSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEV 274

Query: 232 RADL------------------------------FTYNTLIALYCKKGMHYEALAVQDRM 261
             ++                              +++N LI  YCK+G+  +A  V D M
Sbjct: 275 TYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEM 334

Query: 262 EREGI-------------------------------SPDIVTYNSLIHGFCREGRMREAR 290
              GI                               +PD+V+YN+L+HG+ + G+  EA 
Sbjct: 335 LNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEAS 394

Query: 291 RLFRDIKGAT--PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
            LF D++     P+ VTY TLIDG C + +LE A RL+E M  + ++P V+TY ++++  
Sbjct: 395 LLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGF 454

Query: 349 CKEGRIRDANRLLNEMNEKKI------------------------------------APD 372
            K G +  A  + +EM  K I                                    APD
Sbjct: 455 VKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPD 514

Query: 373 NVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLF 432
               N  I+  CK+G+   A++ + ++   GL+ D  TY  +I G+ +  +  +A+ L  
Sbjct: 515 LTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYD 574

Query: 433 GMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKE 492
            ML     PS  +Y  L+ G+      E   +   E   RG+  +V  + AL+   CK  
Sbjct: 575 EMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAG 634

Query: 493 KVDYAQRLFNLMQGNGILGDSVIYTSL 519
            +D A R    M+  GI  +   YT L
Sbjct: 635 NIDEAYRYLCKMEEEGIPPNKYSYTML 661



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 116/476 (24%), Positives = 196/476 (41%), Gaps = 62/476 (13%)

Query: 66  WAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDD 125
           W E    N + S  ++  +I+  +KN   + A+     +    F  TP   N L++    
Sbjct: 261 WLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIE---- 316

Query: 126 PDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVW 185
                         Y    +  D   V D+M    + P      + + +L      D   
Sbjct: 317 -------------GYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDAR 363

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
           ++   M    VV+    YN L+H   K     +   L  ++   D+   + TYNTLI   
Sbjct: 364 ELLSSMAAPDVVS----YNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGL 419

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNH 303
           C+ G    A  +++ M  + I PD++TY +L+ GF + G +  A  ++ ++  KG  P+ 
Sbjct: 420 CESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDG 479

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAK------------------------------- 332
             YTT   G  R  D ++A RL E M A                                
Sbjct: 480 YAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQR 539

Query: 333 -----GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
                G+ P  VTY +++R   + G+ + A  L +EM  K++ P  +T   LI  + K G
Sbjct: 540 KIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAG 599

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
               A +    M + G+  +  T+ AL++G CKA  +D A   L  M + G  P+  SY+
Sbjct: 600 RLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYT 659

Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCK---KEKVDYAQRL 500
            L+   C+    E ++KL  E + + +  D   +RAL +   K     +V++ +RL
Sbjct: 660 MLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKDHESREVEFLERL 715



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 115/419 (27%), Positives = 170/419 (40%), Gaps = 43/419 (10%)

Query: 139 FYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVA 198
           F  N KM ++  +    MR        ++   L+    K  L D  W V  +M+  G+  
Sbjct: 283 FSKNGKM-EEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYP 341

Query: 199 NIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQ 258
               YN+ I A C    +D   +LL  M   DV     +YNTL+  Y K G   EA  + 
Sbjct: 342 TTSTYNIYICALCDFGRIDDARELLSSMAAPDV----VSYNTLMHGYIKMGKFVEASLLF 397

Query: 259 DRMEREGISPDIVTYNSLIHGFCREGRMREARRL---------FRDI------------- 296
           D +    I P IVTYN+LI G C  G +  A+RL         F D+             
Sbjct: 398 DDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKN 457

Query: 297 ---------------KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVY-PGVVT 340
                          KG  P+   YTT   G  R  D ++A RL E M A   + P +  
Sbjct: 458 GNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTI 517

Query: 341 YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML 400
           YN  +  LCK G +  A     ++    + PD+VT  T+I  Y + G    A  + + ML
Sbjct: 518 YNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEML 577

Query: 401 EAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEE 460
              L     TY  LI+G  KA  ++ A +    M   G  P+  +++ L+ G C   N +
Sbjct: 578 RKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNID 637

Query: 461 ALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
              + L +    G+  +   Y  LI + C  EK +   +L+  M    I  D   + +L
Sbjct: 638 EAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRAL 696


>gi|242051246|ref|XP_002463367.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
 gi|241926744|gb|EER99888.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
          Length = 543

 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 116/374 (31%), Positives = 189/374 (50%), Gaps = 2/374 (0%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D   + D+M  H +  +      LL+   + +    V ++ + M   G+ A +  Y +L+
Sbjct: 150 DARALLDEMPRHGVRLNALCYNSLLDCYVRRKDDARVQELLEIMENGGIEATVGTYTILV 209

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
            +   + D+ KVE ++ EM+ K+V  D++ Y  +I  YC+ G    A  V D     GI 
Sbjct: 210 DSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCRAGNVRRASEVFDECVGNGIE 269

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
           P+  TY  LI+GFC+ G+M  A  L  D+  +G   N + + T+IDGYCR   ++ AL++
Sbjct: 270 PNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFNTMIDGYCRQGMVDNALKV 329

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
           +  M   G+   V TYN++   LC+  R+ +A  LL+ M EK + P+ VT  TLI+ +CK
Sbjct: 330 KAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKGVPPNYVTYTTLISIHCK 389

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            GD   A ++   M   G M    TY  ++ G+ K   +  A+     M   G  P   +
Sbjct: 390 EGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAERFRKEMEKKGLVPDVYT 449

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+ LV G+C     +  LKL +E   RG   +V  Y ALI    K+ + + A +L++ M 
Sbjct: 450 YASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALISGLAKEGRSEEAFQLYDDML 509

Query: 506 GNGILGDSVIYTSL 519
             G+  D  +Y++L
Sbjct: 510 KAGLTPDDSLYSAL 523



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 112/311 (36%), Positives = 164/311 (52%), Gaps = 2/311 (0%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           V D+M+  N+   ++  T ++N+  +        +V+ + V  G+  N   Y VLI+  C
Sbjct: 224 VVDEMKAKNVAGDVYLYTAVINAYCRAGNVRRASEVFDECVGNGIEPNERTYGVLINGFC 283

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           K   ++  E LL +M+ + V  +   +NT+I  YC++GM   AL V+  ME+ GI  D+ 
Sbjct: 284 KIGQMEAAEMLLADMQGRGVGHNQIIFNTMIDGYCRQGMVDNALKVKAAMEKMGIELDVY 343

Query: 272 TYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           TYN+L  G CR  RM EA+ L   +  KG  PN+VTYTTLI  +C+  D+ EA RL   M
Sbjct: 344 TYNTLACGLCRVNRMAEAKTLLHIMIEKGVPPNYVTYTTLISIHCKEGDMVEARRLFREM 403

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
           A KG  P VVTYN ++    K+G IR+A R   EM +K + PD  T  +L++ +C  G  
Sbjct: 404 AGKGAMPSVVTYNVMMDGYIKKGSIREAERFRKEMEKKGLVPDVYTYASLVHGHCVNGKV 463

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
             A+K+   M   G   +   Y ALI G  K    + A +L   ML AG +P    YS L
Sbjct: 464 DVALKLFEEMKHRGTEPNVVAYTALISGLAKEGRSEEAFQLYDDMLKAGLTPDDSLYSAL 523

Query: 450 VDGYCNKNNEE 460
           V      N ++
Sbjct: 524 VGSLHTDNRKD 534



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 114/398 (28%), Positives = 187/398 (46%), Gaps = 2/398 (0%)

Query: 167 ACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEM 226
           A +V+++   K    D    +  +M + GV  N   YN L+    +  D  +V++LL  M
Sbjct: 134 AASVVVDGFCKSGRVDDARALLDEMPRHGVRLNALCYNSLLDCYVRRKDDARVQELLEIM 193

Query: 227 EFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRM 286
           E   + A + TY  L+      G   +  AV D M+ + ++ D+  Y ++I+ +CR G +
Sbjct: 194 ENGGIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCRAGNV 253

Query: 287 REARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSI 344
           R A  +F +    G  PN  TY  LI+G+C+   +E A  L   M  +GV    + +N++
Sbjct: 254 RRASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFNTM 313

Query: 345 LRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGL 404
           +   C++G + +A ++   M +  I  D  T NTL    C++   A A  + + M+E G+
Sbjct: 314 IDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKGV 373

Query: 405 MLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLK 464
             +  TY  LI   CK  +M  A+ L   M   G  PS  +Y+ ++DGY  K +     +
Sbjct: 374 PPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAER 433

Query: 465 LLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYW 524
              E   +GL  DV  Y +L+   C   KVD A +LF  M+  G   + V YT+L     
Sbjct: 434 FRKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALISGLA 493

Query: 525 RAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDN 562
           + G  +    + DDM +  L     +Y +   S   DN
Sbjct: 494 KEGRSEEAFQLYDDMLKAGLTPDDSLYSALVGSLHTDN 531



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 97/368 (26%), Positives = 170/368 (46%), Gaps = 2/368 (0%)

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER 263
           +V++   CKS  VD    LL EM    VR +   YN+L+  Y ++        + + ME 
Sbjct: 136 SVVVDGFCKSGRVDDARALLDEMPRHGVRLNALCYNSLLDCYVRRKDDARVQELLEIMEN 195

Query: 264 EGISPDIVTYNSLIHGFCREGRMREARRLFRDIKG--ATPNHVTYTTLIDGYCRANDLEE 321
            GI   + TY  L+      G + +   +  ++K      +   YT +I+ YCRA ++  
Sbjct: 196 GGIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCRAGNVRR 255

Query: 322 ALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
           A  + +     G+ P   TY  ++   CK G++  A  LL +M  + +  + +  NT+I+
Sbjct: 256 ASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFNTMID 315

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
            YC+ G   +A+KVK  M + G+ LD +TY  L  G C+   M  AK LL  M++ G  P
Sbjct: 316 GYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKGVPP 375

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
           +Y +Y+ L+  +C + +     +L  E   +G    V  Y  ++  + KK  +  A+R  
Sbjct: 376 NYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAERFR 435

Query: 502 NLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKD 561
             M+  G++ D   Y SL + +   G+      + ++M  R     +  Y +  +  AK+
Sbjct: 436 KEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALISGLAKE 495

Query: 562 NEILDLFW 569
               + F 
Sbjct: 496 GRSEEAFQ 503



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 44/191 (23%), Positives = 88/191 (46%)

Query: 374 VTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFG 433
           +  + +++ +CK G    A  + + M   G+ L+   Y +L+  + + K+    +ELL  
Sbjct: 133 LAASVVVDGFCKSGRVDDARALLDEMPRHGVRLNALCYNSLLDCYVRRKDDARVQELLEI 192

Query: 434 MLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEK 493
           M + G   +  +Y+ LVD      +   +  ++DE  ++ +  DV +Y A+I  +C+   
Sbjct: 193 MENGGIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCRAGN 252

Query: 494 VDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRS 553
           V  A  +F+   GNGI  +   Y  L   + + G+ +A   +L DM  R +     I+ +
Sbjct: 253 VRRASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFNT 312

Query: 554 FSASYAKDNEI 564
               Y +   +
Sbjct: 313 MIDGYCRQGMV 323


>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 556

 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 109/395 (27%), Positives = 197/395 (49%), Gaps = 4/395 (1%)

Query: 199 NIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQ 258
           + + YN LI   C     D    +L +M  +    D+ TY  L+   CK+  + +A+ + 
Sbjct: 151 DTYTYNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLL 210

Query: 259 DRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRA 316
           D M  +G +PDIVTYN +++G C+EGR+ +A    + +   G  PN V+Y  ++ G C A
Sbjct: 211 DEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTA 270

Query: 317 NDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTC 376
              E+A +L   M+ KG  P VVT+N ++  LC+ G +  A  +L+++ +    P++++ 
Sbjct: 271 ERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSY 330

Query: 377 NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD 436
           N +++A+CK      AM     M+ +G   D  +Y  L+   C+  E+D A ELL  + D
Sbjct: 331 NPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKD 390

Query: 437 AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDY 496
            G +P   SY+ ++DG       E  L+LL+E V++GL  D+  Y  +    C++ +++ 
Sbjct: 391 KGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEE 450

Query: 497 AQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSA 556
           A + F  +Q  GI  ++V+Y ++     +     +  D+   M     M     Y     
Sbjct: 451 AIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIE 510

Query: 557 SYAKDNEILDL--FWSHVVDRGLMSKHIFKEMQLR 589
             A +  + +     + +  RG++SK +  +  +R
Sbjct: 511 GLAYEGLVKEAREMMAELCSRGVVSKTLVNKGAIR 545



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 97/377 (25%), Positives = 194/377 (51%), Gaps = 8/377 (2%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMT--QDGLQVFDQMRVHNLMPHLHACTVL 171
           +VL+ +++    PD    V+++ ++  A  K +  +  +++ D+MR     P +    V+
Sbjct: 173 AVLDDMLRRGCVPD----VVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVV 228

Query: 172 LNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDV 231
           +N + ++   D   +  K +   G   N   YN+++   C +   +  EKL+ EM  K  
Sbjct: 229 VNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGR 288

Query: 232 RADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARR 291
             ++ T+N LI+  C++G+   A+ + D++ + G +P+ ++YN ++H FC++ +M  A  
Sbjct: 289 PPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMA 348

Query: 292 LFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLC 349
               +   G  P+ V+Y TL+   CR  +++ A+ L   +  KG  P +++YN+++  L 
Sbjct: 349 FVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLT 408

Query: 350 KEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQF 409
           K G+  +A  LLNEM  K + PD +T +T+ +  C+ G    A+K   ++ + G+  +  
Sbjct: 409 KAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTV 468

Query: 410 TYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEF 469
            Y A++ G CK +    A +L   M+  G  P+  +Y+ L++G   +   +   +++ E 
Sbjct: 469 LYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEAREMMAEL 528

Query: 470 VSRGLCVDVSVYRALIR 486
            SRG+     V +  IR
Sbjct: 529 CSRGVVSKTLVNKGAIR 545



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 97/372 (26%), Positives = 175/372 (47%), Gaps = 2/372 (0%)

Query: 146 TQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNV 205
           T + L V D M     +P +   T+LL +  K        K+  +M   G   +I  YNV
Sbjct: 168 TDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNV 227

Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
           +++  C+   VD   + L  +       +  +YN ++   C      +A  +   M R+G
Sbjct: 228 VVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKG 287

Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEAL 323
             P++VT+N LI   CR G +  A  +   I   G TPN ++Y  ++  +C+   ++ A+
Sbjct: 288 RPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAM 347

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
              E+M + G YP +V+YN++L  LC+ G +  A  LL+++ +K   P  ++ NT+I+  
Sbjct: 348 AFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGL 407

Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY 443
            K G T  A+++ N M+  GL  D  TY  +  G C+   ++ A +    + D G  P+ 
Sbjct: 408 TKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNT 467

Query: 444 CSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNL 503
             Y+ ++ G C +    + + L    VS G   + S Y  LI     +  V  A+ +   
Sbjct: 468 VLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEAREMMAE 527

Query: 504 MQGNGILGDSVI 515
           +   G++  +++
Sbjct: 528 LCSRGVVSKTLV 539



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 106/382 (27%), Positives = 178/382 (46%), Gaps = 2/382 (0%)

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
           P  +    L+  L     TD    V   M++ G V ++  Y +L+ A CK S   +  KL
Sbjct: 150 PDTYTYNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKL 209

Query: 223 LCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR 282
           L EM  K    D+ TYN ++   C++G   +A+     +   G  P+ V+YN ++ G C 
Sbjct: 210 LDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCT 269

Query: 283 EGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVT 340
             R  +A +L  ++  KG  PN VT+  LI   CR   +E A+ + + +   G  P  ++
Sbjct: 270 AERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLS 329

Query: 341 YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML 400
           YN IL   CK+ ++  A   +  M      PD V+ NTL+ A C+ G+  +A+++ +++ 
Sbjct: 330 YNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLK 389

Query: 401 EAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEE 460
           + G      +Y  +I G  KA + + A ELL  M+  G  P   +YS +  G C +   E
Sbjct: 390 DKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIE 449

Query: 461 ALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLA 520
             +K   +    G+  +  +Y A++   CK+     A  LF  M  NG + +   YT L 
Sbjct: 450 EAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILI 509

Query: 521 YAYWRAGEPKACSDILDDMYRR 542
                 G  K   +++ ++  R
Sbjct: 510 EGLAYEGLVKEAREMMAELCSR 531



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 102/345 (29%), Positives = 163/345 (47%), Gaps = 10/345 (2%)

Query: 241 LIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGAT 300
           LI   C  G   EA  V    E     PD+++YN+++ G+C  G++  ARRL   +    
Sbjct: 96  LIKKLCASGRTAEARRVLASCE-----PDVMSYNAMVAGYCVTGQLDNARRLVAAMP-ME 149

Query: 301 PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRL 360
           P+  TY TLI G C     + AL + + M  +G  P VVTY  +L   CK    + A +L
Sbjct: 150 PDTYTYNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKL 209

Query: 361 LNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCK 420
           L+EM +K  APD VT N ++N  C+ G    AM+    +   G   +  +Y  ++ G C 
Sbjct: 210 LDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCT 269

Query: 421 AKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSV 480
           A+  + A++L+  M   G  P+  +++ L+   C +   E  +++LD+    G   +   
Sbjct: 270 AERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLS 329

Query: 481 YRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMY 540
           Y  ++  FCK++K+D A     LM  +G   D V Y +L  A  R GE  A  ++L  + 
Sbjct: 330 YNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLK 389

Query: 541 RRRLMITLKIYRSFS---ASYAKDNEILDLFWSHVVDRGLMSKHI 582
            +     L  Y +         K  E L+L  + +V +GL    I
Sbjct: 390 DKGCTPVLISYNTVIDGLTKAGKTEEALELL-NEMVTKGLQPDII 433



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/257 (24%), Positives = 111/257 (43%), Gaps = 37/257 (14%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N    + L+ F     + +  +++ DQ+  +   P+  +   +L++  K +  D      
Sbjct: 291 NVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFV 350

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
           + MV  G   +I  YN L+ A C+  +VD   +LL +++ K     L +YNT+I    K 
Sbjct: 351 ELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKA 410

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK----------- 297
           G   EAL + + M  +G+ PDI+TY+++  G CREGR+ EA + F  ++           
Sbjct: 411 GKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLY 470

Query: 298 --------------------------GATPNHVTYTTLIDGYCRANDLEEALRLREVMAA 331
                                     G  PN  TYT LI+G      ++EA  +   + +
Sbjct: 471 NAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEAREMMAELCS 530

Query: 332 KGVYPGVVTYNSILRKL 348
           +GV    +     +R L
Sbjct: 531 RGVVSKTLVNKGAIRLL 547



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 97/203 (47%), Gaps = 11/203 (5%)

Query: 315 RANDLEEALRLREVMAAKGVYPGVV-TYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDN 373
           R  DLEEA+RL E MA  G+ P       ++++KLC  GR  +A R+L         PD 
Sbjct: 68  RRGDLEEAIRLVESMA--GLEPSAAGPCAALIKKLCASGRTAEARRVL-----ASCEPDV 120

Query: 374 VTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFG 433
           ++ N ++  YC  G   +A ++   M    +  D +TY  LI G C     D A  +L  
Sbjct: 121 MSYNAMVAGYCVTGQLDNARRLVAAM---PMEPDTYTYNTLIRGLCGRGRTDNALAVLDD 177

Query: 434 MLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEK 493
           ML  G  P   +Y+ L++  C ++  +  +KLLDE   +G   D+  Y  ++   C++ +
Sbjct: 178 MLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGR 237

Query: 494 VDYAQRLFNLMQGNGILGDSVIY 516
           VD A      +   G   ++V Y
Sbjct: 238 VDDAMEFLKSLPSYGCEPNTVSY 260


>gi|2462828|gb|AAB72163.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1152

 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 143/579 (24%), Positives = 246/579 (42%), Gaps = 109/579 (18%)

Query: 46  VLLNLYNCCHI-PSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKI 104
           +L+ + N   + P ++  FF W +    + K S Q+   M+ IL +N     A  + E+ 
Sbjct: 124 LLIRVLNMIRVKPEIAFRFFNWIQRQ-SDVKQSRQAFAAMLEILAENDLMSEAYLVAERS 182

Query: 105 ALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPH 164
                L    + + L+    D      +L  L+  Y    M +  L  F++M     +P 
Sbjct: 183 ID---LGMHEIDDLLIDGSFDKLIALKLLDLLLWVYTKKSMAEKFLLSFEKMIRKGFLPS 239

Query: 165 LHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLC 224
           +  C ++L  L   R+ +    VY+ M++ G++  +  +N ++ +C K+ D+++V+K+  
Sbjct: 240 VRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWL 299

Query: 225 EM-----EFKDVRADL------------------------------FTYNTLIALYCKKG 249
           EM     EF +V  ++                              +++N LI  YCK+G
Sbjct: 300 EMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQG 359

Query: 250 MHYEALAVQDRMEREGI-------------------------------SPDIVTYNSLIH 278
           +  +A  V D M   GI                               +PD+V+YN+L+H
Sbjct: 360 LFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMH 419

Query: 279 GFCREGRMREARRLFRDIKGAT--PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYP 336
           G+ + G+  EA  LF D++     P+ VTY TLIDG C + +LE A RL+E M  + ++P
Sbjct: 420 GYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFP 479

Query: 337 GVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI--------------------------- 369
            V+TY ++++   K G +  A  + +EM  K I                           
Sbjct: 480 DVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLH 539

Query: 370 ---------APDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCK 420
                    APD    N  I+  CK+G+   A++ + ++   GL+ D  TY  +I G+ +
Sbjct: 540 EEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLE 599

Query: 421 AKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSV 480
             +  +A+ L   ML     PS  +Y  L+ G+      E   +   E   RG+  +V  
Sbjct: 600 NGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMT 659

Query: 481 YRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
           + AL+   CK   +D A R    M+  GI  +   YT L
Sbjct: 660 HNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTML 698



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 109/421 (25%), Positives = 173/421 (41%), Gaps = 70/421 (16%)

Query: 139 FYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVA 198
           F  N KM ++  +    MR        ++   L+    K  L D  W V  +M+  G+  
Sbjct: 320 FSKNGKM-EEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYP 378

Query: 199 NIHLYNVLIHACCKSSDVDKVEKLLCEME--------------------------FKDVR 232
               YN+ I A C    +D   +LL  M                           F D+R
Sbjct: 379 TTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLR 438

Query: 233 A-----DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMR 287
           A      + TYNTLI   C+ G    A  +++ M  + I PD++TY +L+ GF + G + 
Sbjct: 439 AGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLS 498

Query: 288 EARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAK------------- 332
            A  ++ ++  KG  P+   YTT   G  R  D ++A RL E M A              
Sbjct: 499 MATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVR 558

Query: 333 -----------------------GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI 369
                                  G+ P  VTY +++R   + G+ + A  L +EM  K++
Sbjct: 559 IDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRL 618

Query: 370 APDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKE 429
            P  +T   LI  + K G    A +    M + G+  +  T+ AL++G CKA  +D A  
Sbjct: 619 YPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYR 678

Query: 430 LLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFC 489
            L  M + G  P+  SY+ L+   C+    E ++KL  E + + +  D   +RAL +   
Sbjct: 679 YLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLE 738

Query: 490 K 490
           K
Sbjct: 739 K 739



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/298 (22%), Positives = 135/298 (45%), Gaps = 25/298 (8%)

Query: 77  SLQSHWTMIHILTKNKHFKSAQNMLEKIALR----DFLSTPSVLNALVK---------IH 123
           S+ ++ T+I  L ++ + + AQ + E++  +    D ++  +++   VK         ++
Sbjct: 445 SIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVY 504

Query: 124 DD-------PDGNSHVLSWLVIFYANLKMTQDGLQVFDQM-RVHNLMPHLHACTVLLNSL 175
           D+       PDG ++      +    L  +    ++ ++M    +  P L    V ++ L
Sbjct: 505 DEMLRKGIKPDGYAYTTR--AVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGL 562

Query: 176 AKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADL 235
            K        +  +K+ ++G+V +   Y  +I    ++        L  EM  K +   +
Sbjct: 563 CKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSV 622

Query: 236 FTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF-- 293
            TY  LI  + K G   +A      M++ G+ P+++T+N+L++G C+ G + EA R    
Sbjct: 623 ITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCK 682

Query: 294 RDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
            + +G  PN  +YT LI   C     EE ++L + M  K + P   T+ ++ + L K+
Sbjct: 683 MEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKD 740


>gi|414881815|tpg|DAA58946.1| TPA: hypothetical protein ZEAMMB73_360564 [Zea mays]
          Length = 792

 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 126/462 (27%), Positives = 215/462 (46%), Gaps = 44/462 (9%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           L +FD++    + P      VL+     + +TD  +K+ ++M++ G++ + + +N++I  
Sbjct: 311 LDLFDEVVSDGVTPTNVTYGVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKG 370

Query: 210 CCKSS---DVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
             +     D   + KL+ +    DV    FTY  LI   CK    +EA+ + D+M+  G+
Sbjct: 371 LLRDKRWKDAIGLLKLVVDTGVPDV----FTYGCLIHWLCKHQKLHEAVNLWDKMKEAGV 426

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
            P IVTY+SL+ G+C +GRM EA +L+ ++  KG  PN VTYTTL+ GY +    + A  
Sbjct: 427 KPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYA 486

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           L   M   GV  G  TYN ++  L    R+ + + +L     +   P  +T N++IN + 
Sbjct: 487 LLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFV 546

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           K G   SA  +  +M + G+  +  TY + I G+C+    D+A +LL  +   G  P   
Sbjct: 547 KAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIA 606

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRA--------------------- 483
           +Y+  +D +C + N    L  L   +  GL  DV+VY +                     
Sbjct: 607 AYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSM 666

Query: 484 --------------LIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEP 529
                         LI  F K   V +A  L++ M  N ++ D   +T+L +   R+G+ 
Sbjct: 667 IKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTALTHGLCRSGDI 726

Query: 530 KACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSH 571
                +LDDM R  +   +  Y     +  +D ++ + F  H
Sbjct: 727 DGAKRLLDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLH 768



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 109/404 (26%), Positives = 187/404 (46%), Gaps = 12/404 (2%)

Query: 187 VYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYC 246
           ++ ++V  GV      Y VLI  C      D+  KL  +M  + +    + +N +I    
Sbjct: 313 LFDEVVSDGVTPTNVTYGVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLL 372

Query: 247 KKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHV 304
           +     +A+ +   +   G+ PD+ TY  LIH  C+  ++ EA  L+  +K  G  P+ V
Sbjct: 373 RDKRWKDAIGLLKLVVDTGV-PDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIV 431

Query: 305 TYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM 364
           TY +L+ GYC    ++EAL+L   M  KG  P  VTY ++++   K+    +A  LLNEM
Sbjct: 432 TYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEM 491

Query: 365 NEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEM 424
            +  ++  + T N LIN    +       ++  R L  G +    TY ++I+GF KA  M
Sbjct: 492 RQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMM 551

Query: 425 DIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRAL 484
             A  +   M   G +P+  +Y+  +DGYC  N  +  +KLL      G+  D++ Y A 
Sbjct: 552 GSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAF 611

Query: 485 IRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL 544
           I  FCK+  +  A     L+  +G+  D  +Y S    Y         S     M ++R+
Sbjct: 612 IDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRV 671

Query: 545 MITLKIYRSFSASYAKDNEI---LDLFWSHVVDRGLMSKHIFKE 585
           +   +IY +    ++K   +   L+L+        +M+ H+  +
Sbjct: 672 VADTEIYTTLIDGFSKVGNVAFALELYSE------MMANHVIPD 709



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 106/421 (25%), Positives = 198/421 (47%), Gaps = 23/421 (5%)

Query: 68  ESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPD 127
           ++ VP+    + ++  +IH L K++    A N+ +K      +    V  ++V  H    
Sbjct: 389 DTGVPD----VFTYGCLIHWLCKHQKLHEAVNLWDK------MKEAGVKPSIVTYHS--- 435

Query: 128 GNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKV 187
                   L++ Y       + L+++ +M      P+    T L+    K +  D  + +
Sbjct: 436 --------LLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYAL 487

Query: 188 YKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCK 247
             +M Q GV    + YN+LI+     + V +V+++L     +       TYN++I  + K
Sbjct: 488 LNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVK 547

Query: 248 KGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVT 305
            GM   A  +  +M ++GI+P+IVTY S I G+CR      A +L   ++  G  P+   
Sbjct: 548 AGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAA 607

Query: 306 YTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMN 365
           Y   ID +C+  ++  AL    ++   G+ P V  YNS +        + +A++    M 
Sbjct: 608 YNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMI 667

Query: 366 EKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMD 425
           ++++  D     TLI+ + K+G+ A A+++ + M+   ++ D  T+ AL HG C++ ++D
Sbjct: 668 KQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTALTHGLCRSGDID 727

Query: 426 IAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
            AK LL  M     SP+  +Y+ L++        +   +L DE +S G+  D + Y  L 
Sbjct: 728 GAKRLLDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLHDEMLSSGVVPDDTTYDILP 787

Query: 486 R 486
           R
Sbjct: 788 R 788



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 118/440 (26%), Positives = 191/440 (43%), Gaps = 18/440 (4%)

Query: 153 FDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCK 212
           + +M    ++P   + T LL + A          ++ +M   G  A+  +Y+V+I AC +
Sbjct: 138 YSRMVTRGVVPDAKSRTDLLVTTALGASAADALTLFDEMRGKGCYADAKMYDVVIRACVR 197

Query: 213 SSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVT 272
                   +L  EM    V+ D   Y   I+  CK      AL V  +M   G  P  +T
Sbjct: 198 GGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELT 257

Query: 273 YNSLIHGFCREGRMREARRLFRDI---KGATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           Y+S++    +  RM EA RL   +    G   + V  T L+ GYC   ++ +AL L + +
Sbjct: 258 YSSVVDVLVKVRRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLNGEVGKALDLFDEV 317

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
            + GV P  VTY  +++    EG   +  +L  +M E+ + P     N +I    +    
Sbjct: 318 VSDGVTPTNVTYGVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRDKRW 377

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
             A+ +   +++ G+  D FTY  LIH  CK +++  A  L   M +AG  PS  +Y  L
Sbjct: 378 KDAIGLLKLVVDTGVP-DVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSL 436

Query: 450 VDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGI 509
           + GYC K   +  LKL  E   +G   +   Y  L++ + KK+  D A  L N M+ NG+
Sbjct: 437 LLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGV 496

Query: 510 LGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFW 569
                 Y  L    +     + C   +D+M +R L         F  +    N I++ F 
Sbjct: 497 SCGDYTYNILINGLYMVN--RVCE--VDEMLKRFL------SEGFVPTTMTYNSIINGF- 545

Query: 570 SHVVDRGLMSKHIFKEMQLR 589
              V  G+M        Q+R
Sbjct: 546 ---VKAGMMGSAFGMYRQMR 562


>gi|297803282|ref|XP_002869525.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315361|gb|EFH45784.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 707

 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 138/466 (29%), Positives = 213/466 (45%), Gaps = 45/466 (9%)

Query: 155 QMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSS 214
           +MR ++LMP + +   ++    + +  +   ++  +M   G   ++  + +LI A CK+ 
Sbjct: 167 EMRQNSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAG 226

Query: 215 DVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYN 274
            +D+   LL EM+ K + ADL  Y +LI  +C  G      A+ D +   G SP  +TYN
Sbjct: 227 KMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYN 286

Query: 275 SLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAK 332
           +LI GFC+ GR++EA  +F  +  +G  PN  TYT LIDG C     +EAL+L  +M  K
Sbjct: 287 TLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQK 346

Query: 333 GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
              P VVTYN I+ KLCK+  + DA  ++  M +++  PDN+T N+L+   C  GD   A
Sbjct: 347 DEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEA 406

Query: 393 MKVKNRMLEAGLMLDQ--FTYKALIHGFCKAKEMDIA---KELLFGMLDAG--------- 438
            K+   ML+     D    ++ ALIHG CK   +  A    +LL   L AG         
Sbjct: 407 SKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILL 466

Query: 439 -----------------------FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLC 475
                                    P+  +Y+ ++DG+C          LL +     L 
Sbjct: 467 NSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELP 526

Query: 476 VDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDI 535
             V  Y  L+   CKK  +D A RLF  MQ +    D + +  +     +AG+ K+   +
Sbjct: 527 PSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESL 586

Query: 536 LDDMYRRRLMITLKIYRSFSASYAK----DNEILDLFWSHVVDRGL 577
           L  M    L   L  Y      + K    D  I   F+  ++D G 
Sbjct: 587 LVGMSHAGLSPDLFTYSKLINRFLKLGYLDEAI--SFFDKMIDSGF 630



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 128/463 (27%), Positives = 219/463 (47%), Gaps = 16/463 (3%)

Query: 133 LSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMV 192
           LS L+  +  ++ T     V   M       +++   +LL  L ++        + ++M 
Sbjct: 110 LSGLLECFVQMRKTGFAHGVLALMLKRGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMR 169

Query: 193 QLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHY 252
           Q  ++ ++  YN +I   C+  +++K  +L  EM+       L T+  LI  +CK G   
Sbjct: 170 QNSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMD 229

Query: 253 EALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLI 310
           EA+ +   M+ +G+  D++ Y SLI GFC  G +   + LF ++  +G +P  +TY TLI
Sbjct: 230 EAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLI 289

Query: 311 DGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIA 370
            G+C+   L+EA  + E M  +GV P V TY  ++  LC  G+ ++A +LLN M +K   
Sbjct: 290 RGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEE 349

Query: 371 PDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL 430
           P+ VT N +IN  CK    A A+++   M +     D  TY +L+ G C   ++D A +L
Sbjct: 350 PNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKL 409

Query: 431 LFGML-DAGFS-PSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRF 488
           L+ ML D+ ++ P   S++ L+ G C  N     L + D  V +    D+     L+   
Sbjct: 410 LYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNST 469

Query: 489 CKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITL 548
            K   V+ A  L+  +  + I+ +S  YT++   + + G       +L  M    L  ++
Sbjct: 470 LKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSV 529

Query: 549 KIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKEMQLRNS 591
             Y    +S  K    LD  W            +F+EMQ  +S
Sbjct: 530 FDYNCLLSSLCKKG-TLDQAW-----------RLFEEMQRDDS 560



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 113/423 (26%), Positives = 190/423 (44%), Gaps = 39/423 (9%)

Query: 144 KMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLY 203
           K  +  LQ+ ++M+       L    +L+++  K    D    + K+M   G+ A++ +Y
Sbjct: 191 KELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVY 250

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER 263
             LI   C   ++D+ + L  E+  +       TYNTLI  +CK G   EA  + + M  
Sbjct: 251 TSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMME 310

Query: 264 EGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEE 321
            G+ P++ TY  LI G C  G+ +EA +L   +  K   PN VTY  +I+  C+ + + +
Sbjct: 311 RGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVAD 370

Query: 322 ALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLL-------------------- 361
           AL + E+M  +   P  +TYNS+L  LC +G + +A++LL                    
Sbjct: 371 ALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNAL 430

Query: 362 -----------------NEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGL 404
                            + + EK  A D VT N L+N+  K GD   AM++  ++  + +
Sbjct: 431 IHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSKI 490

Query: 405 MLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLK 464
           + +  TY  +I GFCK   +++AK LL  M  +   PS   Y+ L+   C K   +   +
Sbjct: 491 VPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAWR 550

Query: 465 LLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYW 524
           L +E        DV  +  +I    K   +  A+ L   M   G+  D   Y+ L   + 
Sbjct: 551 LFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLFTYSKLINRFL 610

Query: 525 RAG 527
           + G
Sbjct: 611 KLG 613



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 111/409 (27%), Positives = 190/409 (46%), Gaps = 18/409 (4%)

Query: 149 GLQVFDQMRVHNLMPHLHACTVLLNSLAKD-----RLTDMVWKVYKKMVQLGVVANIHLY 203
           G  +FD++      P    C +  N+L +      RL +   ++++ M++ GV  N++ Y
Sbjct: 266 GKALFDEVLERGDSP----CAITYNTLIRGFCKLGRLKE-ASEIFEFMMERGVRPNVYTY 320

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER 263
             LI   C      +  +LL  M  KD   ++ TYN +I   CK  +  +AL + + M++
Sbjct: 321 TGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKK 380

Query: 264 EGISPDIVTYNSLIHGFCREGRMREARRLF----RDIKGATPNHVTYTTLIDGYCRANDL 319
               PD +TYNSL+ G C +G + EA +L     +D     P+ +++  LI G C+ N L
Sbjct: 381 RRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRL 440

Query: 320 EEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTL 379
            +AL + +++  K     +VT N +L    K G +  A  L  +++  KI P++ T  T+
Sbjct: 441 HQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTM 500

Query: 380 INAYCKIG--DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA 437
           I+ +CK G  + A  +  K R+ E  L    F Y  L+   CK   +D A  L   M   
Sbjct: 501 IDGFCKTGMLNVAKGLLCKMRLSE--LPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRD 558

Query: 438 GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYA 497
              P   S++ ++DG     + ++   LL      GL  D+  Y  LI RF K   +D A
Sbjct: 559 DSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLFTYSKLINRFLKLGYLDEA 618

Query: 498 QRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMI 546
              F+ M  +G   D+ I  S+       GE    ++ +  +  + +++
Sbjct: 619 ISFFDKMIDSGFEPDAHICDSVLKYCISQGETDKLTEFVKKLVDKDVVL 667



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 113/382 (29%), Positives = 180/382 (47%), Gaps = 13/382 (3%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N +  + L+     +  T++ LQ+ + M   +  P++    +++N L KD L     ++ 
Sbjct: 316 NVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIV 375

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKD---VRADLFTYNTLIALY 245
           + M +     +   YN L+   C   D+D+  KLL  M  KD      D+ ++N LI   
Sbjct: 376 ELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLM-LKDSSYTDPDVISFNALIHGL 434

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGA--TPNH 303
           CK    ++AL + D +  +  + DIVT N L++   + G + +A  L++ I  +   PN 
Sbjct: 435 CKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNS 494

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
            TYTT+IDG+C+   L  A  L   M    + P V  YN +L  LCK+G +  A RL  E
Sbjct: 495 DTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEE 554

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
           M      PD ++ N +I+   K GD  SA  +   M  AGL  D FTY  LI+ F K   
Sbjct: 555 MQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLFTYSKLINRFLKLGY 614

Query: 424 MDIAKELLFGMLDAGFSPS--YCSYSWLVDGYCNKNNE-EALLKLLDEFVSRGLCVDVSV 480
           +D A      M+D+GF P    C     V  YC    E + L + + + V + + +D  +
Sbjct: 615 LDEAISFFDKMIDSGFEPDAHICDS---VLKYCISQGETDKLTEFVKKLVDKDVVLDKEL 671

Query: 481 YRALIRRFCKKE-KVDYAQRLF 501
              ++   C     +D A+RL 
Sbjct: 672 TCTVMDYMCSSSGNMDIAKRLL 693



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 88/336 (26%), Positives = 169/336 (50%), Gaps = 2/336 (0%)

Query: 171 LLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKD 230
           L+ +L + R  ++ +  Y+KM++     N    + L+    +         +L  M  + 
Sbjct: 78  LMATLVRSRNHEVAFSFYRKMLETDTFINFVSLSGLLECFVQMRKTGFAHGVLALMLKRG 137

Query: 231 VRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREAR 290
              +++ YN L+   C+     +A+++   M +  + PD+V+YN++I GFC    + +A 
Sbjct: 138 FAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEKAL 197

Query: 291 RLFRDIKGA--TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
           +L  +++G+  + + VT+  LID +C+A  ++EA+ L + M  KG+   ++ Y S++R  
Sbjct: 198 QLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGF 257

Query: 349 CKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ 408
           C  G +     L +E+ E+  +P  +T NTLI  +CK+G    A ++   M+E G+  + 
Sbjct: 258 CDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNV 317

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
           +TY  LI G C   +   A +LL  ML     P+  +Y+ +++  C  +     L++++ 
Sbjct: 318 YTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVEL 377

Query: 469 FVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
              R    D   Y +L+   C K  +D A +L  LM
Sbjct: 378 MKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLM 413



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 73/265 (27%), Positives = 117/265 (44%)

Query: 302 NHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLL 361
           N V+ + L++ + +      A  +  +M  +G    V  YN +L+ LC+      A  LL
Sbjct: 106 NFVSLSGLLECFVQMRKTGFAHGVLALMLKRGFAFNVYNYNILLKGLCRNLEFGKAVSLL 165

Query: 362 NEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKA 421
            EM +  + PD V+ NT+I  +C+  +   A+++ N M  +G      T+  LI  FCKA
Sbjct: 166 REMRQNSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKA 225

Query: 422 KEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVY 481
            +MD A  LL  M   G       Y+ L+ G+C+    +    L DE + RG       Y
Sbjct: 226 GKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITY 285

Query: 482 RALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
             LIR FCK  ++  A  +F  M   G+  +   YT L       G+ K    +L+ M +
Sbjct: 286 NTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQ 345

Query: 542 RRLMITLKIYRSFSASYAKDNEILD 566
           +     +  Y        KD+ + D
Sbjct: 346 KDEEPNVVTYNIIINKLCKDSLVAD 370



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/228 (25%), Positives = 106/228 (46%)

Query: 315 RANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNV 374
           R+ + E A      M     +   V+ + +L    +  +   A+ +L  M ++  A +  
Sbjct: 84  RSRNHEVAFSFYRKMLETDTFINFVSLSGLLECFVQMRKTGFAHGVLALMLKRGFAFNVY 143

Query: 375 TCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGM 434
             N L+   C+  +   A+ +   M +  LM D  +Y  +I GFC+ KE++ A +L   M
Sbjct: 144 NYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEKALQLANEM 203

Query: 435 LDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKV 494
             +G S S  ++  L+D +C     +  + LL E   +GL  D+ VY +LIR FC   ++
Sbjct: 204 QGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGEL 263

Query: 495 DYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRR 542
           D  + LF+ +   G    ++ Y +L   + + G  K  S+I + M  R
Sbjct: 264 DRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMER 311



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 53/208 (25%), Positives = 91/208 (43%), Gaps = 18/208 (8%)

Query: 80  SHWTMIHILTKNKHFKSAQN----MLEKIALRDFLSTPSVLNALVKIHDDPDG------- 128
           S   +IH L K      A +    ++EK+   D ++T  +LN+ +K  D           
Sbjct: 426 SFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQI 485

Query: 129 -------NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLT 181
                  NS   + ++  +    M      +  +MR+  L P +     LL+SL K    
Sbjct: 486 SNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTL 545

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
           D  W+++++M +     ++  +N++I    K+ D+   E LL  M    +  DLFTY+ L
Sbjct: 546 DQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLFTYSKL 605

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPD 269
           I  + K G   EA++  D+M   G  PD
Sbjct: 606 INRFLKLGYLDEAISFFDKMIDSGFEPD 633



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 84/181 (46%), Gaps = 2/181 (1%)

Query: 398 RMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKN 457
           +MLE    ++  +   L+  F + ++   A  +L  ML  GF+ +  +Y+ L+ G C   
Sbjct: 97  KMLETDTFINFVSLSGLLECFVQMRKTGFAHGVLALMLKRGFAFNVYNYNILLKGLCRNL 156

Query: 458 NEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYT 517
                + LL E     L  DV  Y  +IR FC+ ++++ A +L N MQG+G     V + 
Sbjct: 157 EFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSWSLVTWG 216

Query: 518 SLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI--LDLFWSHVVDR 575
            L  A+ +AG+      +L +M  + L   L +Y S    +    E+      +  V++R
Sbjct: 217 ILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLER 276

Query: 576 G 576
           G
Sbjct: 277 G 277


>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 639

 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 109/377 (28%), Positives = 197/377 (52%), Gaps = 3/377 (0%)

Query: 170 VLLNSLAKDRLTDMVWKVYKKMVQLGVV-ANIHLYNVLIHACCKSSDVDKVEKLLCEMEF 228
            L+N L K   T    ++ +K+  L +V  ++ +Y  +I + CK   V     L  EM  
Sbjct: 163 TLINGLCKSGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIV 222

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
           K +  ++ T+N+LI  +C  G   EA+ + + M    ++P++ T+N LI G C+EG +++
Sbjct: 223 KKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKK 282

Query: 289 ARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILR 346
           A  +   +  +G  PN VTYT+L+DGY    ++ +A  +   ++ +GV P V +Y+ ++ 
Sbjct: 283 ATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMIN 342

Query: 347 KLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLML 406
            LCK   + +A +L  EM+ K + P+ VT ++LI+  CK G  +    + + +   G   
Sbjct: 343 GLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPA 402

Query: 407 DQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLL 466
           +  TY +L++G CK  ++D A  LL  M D G  P   +Y+ LVDG C     +   ++ 
Sbjct: 403 NIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIY 462

Query: 467 DEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRA 526
            + + +G  +++ +Y  +I   CK+   D A  L + M+ NG + D+V Y +L  A ++ 
Sbjct: 463 QDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAVTYETLISALFKN 522

Query: 527 GEPKACSDILDDMYRRR 543
            +      +L +M  R 
Sbjct: 523 NKNGKAVKLLREMIARE 539



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 120/439 (27%), Positives = 208/439 (47%), Gaps = 11/439 (2%)

Query: 155 QMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSS 214
           QM +  + P +    +L+N  +     +  + +  K+++LG   +    N L+   C + 
Sbjct: 78  QMELKGIQPEMFTFNILINCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLNG 137

Query: 215 DVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG---ISPDIV 271
            V +       +  K    D  +Y TLI   CK G    AL +  ++E  G   + PD++
Sbjct: 138 KVKEALNFHDHVIRKRFHLDQVSYGTLINGLCKSGETRAALQLLRKIE--GLLLVRPDVI 195

Query: 272 TYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
            Y ++I  FC++  + +A  L+ +  +K   PN VT+ +LI G+C    L+EA+ L   M
Sbjct: 196 MYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEM 255

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
           +   V P V T+N ++  LCKEG ++ A  +L+ M ++ + P+ VT  +L++ Y  + + 
Sbjct: 256 SLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEV 315

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
             A  V N +   G+  +  +Y  +I+G CK K +D A +L   M     +P+  +YS L
Sbjct: 316 NKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSL 375

Query: 450 VDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGI 509
           +DG C       +  L+DE  +RG   ++  Y +L+   CK  +VD A  L   M+  GI
Sbjct: 376 IDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGI 435

Query: 510 LGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKD---NEILD 566
             D   YT+L     + G  K    I  D+  +   + +++Y        K+   +E L 
Sbjct: 436 QPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALS 495

Query: 567 LFWSHVVDRGLMSKHIFKE 585
           L  S + D G M   +  E
Sbjct: 496 LL-SQMEDNGCMPDAVTYE 513



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 97/368 (26%), Positives = 168/368 (45%), Gaps = 38/368 (10%)

Query: 235 LFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI------------------------ 270
           +F +N +++   K      A++   +ME +GI P++                        
Sbjct: 53  IFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNILINCFSHLCQLNFAFSMVA 112

Query: 271 -----------VTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRAN 317
                      VT N+L+ G C  G+++EA      +  K    + V+Y TLI+G C++ 
Sbjct: 113 KILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLINGLCKSG 172

Query: 318 DLEEALR-LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTC 376
           +   AL+ LR++     V P V+ Y +I+   CK+  + DA  L +EM  KKI P+ VT 
Sbjct: 173 ETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTF 232

Query: 377 NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD 436
           N+LI  +C +G    A+ + N M    +  + +T+  LI G CK  E+  A  +L  M+ 
Sbjct: 233 NSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIK 292

Query: 437 AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDY 496
            G  P+  +Y+ L+DGY           + +    RG+  +V  Y  +I   CK + VD 
Sbjct: 293 QGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDE 352

Query: 497 AQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSA 556
           A +LF  M    +  ++V Y+SL     ++G      D++D++  R     +  Y S   
Sbjct: 353 AVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLN 412

Query: 557 SYAKDNEI 564
              K++++
Sbjct: 413 GLCKNHQV 420



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 81/253 (32%), Positives = 140/253 (55%), Gaps = 4/253 (1%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           SVL+ ++K   +P  N    + L+  Y  +K       VF+ + +  + P++H+ +V++N
Sbjct: 285 SVLSVMIKQGVEP--NVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMIN 342

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
            L K+++ D   K++K+M    +  N   Y+ LI   CKS  +  V  L+ E+  +   A
Sbjct: 343 GLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPA 402

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           ++ TYN+L+   CK     +A+A+  +M+ EGI PD+ TY +L+ G C+ GR+++A+R++
Sbjct: 403 NIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIY 462

Query: 294 RDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
           +D+  KG   N   YT +I+G C+    +EAL L   M   G  P  VTY +++  L K 
Sbjct: 463 QDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAVTYETLISALFKN 522

Query: 352 GRIRDANRLLNEM 364
            +   A +LL EM
Sbjct: 523 NKNGKAVKLLREM 535



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 77/329 (23%), Positives = 138/329 (41%), Gaps = 52/329 (15%)

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGV--------------------- 338
           TP    +  ++    + N  + A+   + M  KG+ P +                     
Sbjct: 50  TPPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNILINCFSHLCQLNFAFS 109

Query: 339 --------------VTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
                         VT N++LR LC  G++++A    + +  K+   D V+  TLIN  C
Sbjct: 110 MVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLINGLC 169

Query: 385 KIGDTASAMKVKNRMLEAGLML---DQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
           K G+T +A+++  ++   GL+L   D   Y A+I  FCK K +  A +L   M+     P
Sbjct: 170 KSGETRAALQLLRKI--EGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYP 227

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
           +  +++ L+ G+C     +  + LL+E     +  +V  +  LI   CK+ +V  A  + 
Sbjct: 228 NVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVL 287

Query: 502 NLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKD 561
           ++M   G+  + V YTSL   Y+   E      + + +  R +   +  Y        K+
Sbjct: 288 SVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKN 347

Query: 562 NEILDLFWSHVVDRGLMSKHIFKEMQLRN 590
                     +VD  +    +FKEM L+N
Sbjct: 348 K---------MVDEAV---KLFKEMHLKN 364


>gi|297744958|emb|CBI38550.3| unnamed protein product [Vitis vinifera]
          Length = 795

 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 118/392 (30%), Positives = 194/392 (49%), Gaps = 38/392 (9%)

Query: 169 TVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEF 228
           T L++ L K  + +    +++ +++  +V N   Y+ LI   CK  DV+K E LL EME 
Sbjct: 196 TALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEE 255

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFC------- 281
           K +  ++  Y++++  Y KKG+  EA+ V  +M +  I P++  Y +LI G+        
Sbjct: 256 KHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGI 315

Query: 282 ----------------------------REGRMREARRLFRDI--KGATPNHVTYTTLID 311
                                       R GRM EA  LF+D+  +G  P+ V YT+++D
Sbjct: 316 ALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMD 375

Query: 312 GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAP 371
           G+ +A    +A  + + M  K     VV YN ++  L K G+  ++      M +  +AP
Sbjct: 376 GFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKY-ESESFHTGMRQLGLAP 434

Query: 372 DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
           D+ T NT+INAYCK G+  +A+K+ N M   GL  +  T   L+   C A E++   +LL
Sbjct: 435 DSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLL 494

Query: 432 FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
             ML  GF P+  ++  ++D        + +L + D+ V  G+ +D+S Y  LI  FC+ 
Sbjct: 495 NDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRL 554

Query: 492 EKVDYAQRLFNLMQGNGILGDSVIYTSLAYAY 523
             +  A  +F  M G GIL D + Y +L + Y
Sbjct: 555 GMIRRATLVFKDMMGKGILADIITYNALIHGY 586



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 113/365 (30%), Positives = 193/365 (52%), Gaps = 18/365 (4%)

Query: 230 DVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA 289
           ++R  +  +N LI  YC+ G    A+ + + M+ EG +PDIVTYN+L++GFC+ G +  A
Sbjct: 12  EIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTA 71

Query: 290 RRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRK 347
           ++L  +I      PN +TYTTLID YC++  LE+AL + + M  K + P VVTY  I+  
Sbjct: 72  KKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNG 131

Query: 348 LCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLD 407
           LCK G++ +A  +  EM E  + P+  +  TLI++  K G+ A A  ++ RM+  G+  D
Sbjct: 132 LCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFD 191

Query: 408 QFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLD 467
              Y AL+ G  KA   + A+++   +L+    P+  +YS L+DG+C   +      LL 
Sbjct: 192 VVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQ 251

Query: 468 EFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
           E   + +  +V VY +++  + KK  ++ A  +   M    IL +  +Y +L   Y++A 
Sbjct: 252 EMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKAD 311

Query: 528 EPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSK--HIFKE 585
           +     D+  +M  R L               ++N ++D F +++   G M +   +FK+
Sbjct: 312 QRGIALDLFKEMKSRGL--------------EENNFVIDSFVNNLKRSGRMEEADELFKD 357

Query: 586 MQLRN 590
           M  R 
Sbjct: 358 MMSRG 362



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 104/375 (27%), Positives = 190/375 (50%), Gaps = 2/375 (0%)

Query: 170 VLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFK 229
           VL++   ++       ++ + M   G   +I  YN L++  CK  D+   +KL+ E+   
Sbjct: 22  VLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISLV 81

Query: 230 DVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA 289
           ++  ++ TY TLI  YCK     +AL + D M  + + PD+VTY  +++G C+ G++ EA
Sbjct: 82  NLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEA 141

Query: 290 RRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRK 347
           + +FR+++  G  PN  +Y TLID   +  ++ EA  L+  M  +G+   VV Y +++  
Sbjct: 142 KSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDG 201

Query: 348 LCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLD 407
           L K G   +A  +   + E+ + P+ VT + LI+ +CK+GD      +   M E  +  +
Sbjct: 202 LFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPN 261

Query: 408 QFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLD 467
              Y +++ G+ K   ++ A +++  M+     P+   Y  L+DGY   +     L L  
Sbjct: 262 VIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFK 321

Query: 468 EFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
           E  SRGL  +  V  + +    +  +++ A  LF  M   G+L D V YTS+   +++AG
Sbjct: 322 EMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAG 381

Query: 528 EPKACSDILDDMYRR 542
           +     +I  +M  +
Sbjct: 382 KESDAFNIAQEMTEK 396



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 113/488 (23%), Positives = 210/488 (43%), Gaps = 56/488 (11%)

Query: 72  PNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALR----DFLSTPSVLNALVKIHD--- 124
           P  + S++    +I    +N     A  +LE +       D ++  +++N   KI D   
Sbjct: 11  PEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFT 70

Query: 125 -----------DPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
                      + + N    + L+  Y   +  +D L ++D+M V +L+P +   T ++N
Sbjct: 71  AKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMN 130

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
            L K    +    V+++M ++GVV N   Y  LI +  K  +V +   L   M  + +  
Sbjct: 131 GLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGF 190

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           D+  Y  L+    K GM   A  +   +  E + P+ VTY++LI G C+ G + +   L 
Sbjct: 191 DVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLL 250

Query: 294 RDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTY---------- 341
           +++  K   PN + Y++++DGY +   L EA+ +   M  + + P V  Y          
Sbjct: 251 QEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKA 310

Query: 342 -------------------------NSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTC 376
                                    +S +  L + GR+ +A+ L  +M  + + PD V  
Sbjct: 311 DQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNY 370

Query: 377 NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD 436
            ++++ + K G  + A  +   M E     D   Y  LI+G  K  + + ++    GM  
Sbjct: 371 TSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYE-SESFHTGMRQ 429

Query: 437 AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDY 496
            G +P   +++ +++ YC + N    LKLL+E  S GL  +      L++R C   +++ 
Sbjct: 430 LGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEK 489

Query: 497 AQRLFNLM 504
              L N M
Sbjct: 490 TMDLLNDM 497



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 104/392 (26%), Positives = 178/392 (45%), Gaps = 6/392 (1%)

Query: 139 FYANLKMT---QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           F  NLK +   ++  ++F  M    L+P     T +++   K       + + ++M +  
Sbjct: 338 FVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKS 397

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
              ++  YNVLI+   K    +  E     M    +  D  T+NT+I  YCK+G    AL
Sbjct: 398 SGFDVVAYNVLINGLFKLGKYES-ESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNAL 456

Query: 256 AVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGY 313
            + + M+  G+ P+ +T N L+   C  G + +   L  D  + G  P   T+  ++D  
Sbjct: 457 KLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDAS 516

Query: 314 CRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDN 373
            ++   +  L + + +   GV   + TYN+++   C+ G IR A  +  +M  K I  D 
Sbjct: 517 SKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADI 576

Query: 374 VTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFG 433
           +T N LI+ YC       A  V ++ML  G+  +  TY  L+ G   A+ +  A  L+  
Sbjct: 577 ITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQ 636

Query: 434 MLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEK 493
           M + G  P+  +Y  LV G+    N +  +KL  E +++G       Y  LI  F K +K
Sbjct: 637 MKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKK 696

Query: 494 VDYAQRLFNLMQGNGILGDSVIYTSLAYAYWR 525
           +  A+ L   MQ  GI  +S  Y  L   +++
Sbjct: 697 MSQAKELMQEMQVRGIPPNSSTYDILICGWYK 728



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 101/464 (21%), Positives = 207/464 (44%), Gaps = 15/464 (3%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N  V S +V  Y    +  + + V  +M   N++P++     L++   K     +   ++
Sbjct: 261 NVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLF 320

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
           K+M   G+  N  + +  ++   +S  +++ ++L  +M  + +  D   Y +++  + K 
Sbjct: 321 KEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKA 380

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTY 306
           G   +A  +   M  +    D+V YN LI+G  + G+  E+      ++  G  P+  T+
Sbjct: 381 GKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKY-ESESFHTGMRQLGLAPDSATF 439

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
            T+I+ YC+  +L  AL+L   M + G+ P  +T N ++++LC  G I     LLN+M  
Sbjct: 440 NTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLV 499

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
               P   T   +++A  K       + + ++++  G+ LD  TY  LI  FC+   +  
Sbjct: 500 MGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRR 559

Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
           A  +   M+  G      +Y+ L+ GYC  ++ +    +  + ++ G+  +V  Y  L+ 
Sbjct: 560 ATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLG 619

Query: 487 RFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMI 546
                  +  A  L N M+  G++ ++  Y  L   + + G  K C  +  +M  +  + 
Sbjct: 620 GLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVP 679

Query: 547 TLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKEMQLRN 590
             + Y    + +AK  ++              +K + +EMQ+R 
Sbjct: 680 KTRTYNVLISCFAKGKKMSQ------------AKELMQEMQVRG 711



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 130/270 (48%), Gaps = 4/270 (1%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           + + + M V    P       +L++ +K R  D++  ++ ++V +GV  ++  YN LI  
Sbjct: 491 MDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLIST 550

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
            C+   + +   +  +M  K + AD+ TYN LI  YC      +A AV  +M  EG+SP+
Sbjct: 551 FCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPN 610

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLRE 327
           + TYN L+ G      ++EA  L   +K  G  PN  TY  L+ G+ +  +++E ++L  
Sbjct: 611 VETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYC 670

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
            M  KG  P   TYN ++    K  ++  A  L+ EM  + I P++ T + LI  + K+ 
Sbjct: 671 EMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLS 730

Query: 388 DTASAMKVKNR--MLEAGLMLDQFTYKALI 415
                 K   R    EA  + ++   K  I
Sbjct: 731 KQPELNKSLKRSYQAEAKRLFEEMNEKGFI 760



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 64/248 (25%), Positives = 112/248 (45%), Gaps = 14/248 (5%)

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           L+  +  L M +    VF  M    ++  +     L++           + V+ +M+  G
Sbjct: 547 LISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEG 606

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
           V  N+  YN+L+     +  + +   L+ +M+ + +  +  TY+ L++ + K G   E +
Sbjct: 607 VSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECV 666

Query: 256 AVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGY 313
            +   M  +G  P   TYN LI  F +  +M +A+ L ++  ++G  PN  TY  LI G+
Sbjct: 667 KLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGW 726

Query: 314 CRANDLEE------------ALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLL 361
            + +   E            A RL E M  KG  P   T   I   L K G+  DA R+L
Sbjct: 727 YKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIPCENTLACISFTLAKPGKKADAQRIL 786

Query: 362 NEMNEKKI 369
           N++ +KK+
Sbjct: 787 NKLYKKKV 794


>gi|326510071|dbj|BAJ87252.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 825

 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 132/422 (31%), Positives = 190/422 (45%), Gaps = 45/422 (10%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D  +VF +M      P +H  TVLL+ L K R       +  +MV  GVV N+  YN LI
Sbjct: 179 DACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALI 238

Query: 208 HACCKSSDVDKVEKLLCEMEF-----------------------------------KDVR 232
              C+    D V KLL +ME                                    K V 
Sbjct: 239 GGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVA 298

Query: 233 ADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRL 292
            ++ TYN LI  YCK G    AL V   M+R  ++P + T+N +IHGFC  G++ +A   
Sbjct: 299 LEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAF 358

Query: 293 FRDIKGA--TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
              + GA  +PN VT+ +LI G C   + + ALRL ++M   GV P   TY   +  LC 
Sbjct: 359 LTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCD 418

Query: 351 EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
           EG++ +A+ L + +  K I   NV   +L++ YC++GD  SA  +  +M     M D  T
Sbjct: 419 EGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHT 478

Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFV 470
           Y  LI G CK K +D A +LL  M   G  P+ C+++ L+             K+ ++ +
Sbjct: 479 YNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQMI 538

Query: 471 SRGLCVDVSVYRALI-----RRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWR 525
           S G   D   Y   I         K+E +D A      M   G+  D   Y ++  AY  
Sbjct: 539 SSGCKPDKQTYTLKISTDWFEGATKEENIDMA---VVEMHEAGVFPDVETYNAIIKAYVD 595

Query: 526 AG 527
           AG
Sbjct: 596 AG 597



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 104/343 (30%), Positives = 173/343 (50%), Gaps = 2/343 (0%)

Query: 169 TVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEF 228
           T+L+  L      D   +V+ KM +      +H Y VL+   CK   V + E LL EM  
Sbjct: 165 TILIKGLCAAGRIDDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVN 224

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
           K V  ++ TYN LI   C++G   +   + ++ME +  SPD  TY  ++HG C+ G++  
Sbjct: 225 KGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGH 284

Query: 289 ARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILR 346
             ++  +   KG     +TY  LI+GYC+  D++ AL + ++M    V PGV T+N ++ 
Sbjct: 285 GAKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIH 344

Query: 347 KLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLML 406
             C  G++  A   L +M    ++P+ VT N+LI+  C +G+   A+++ + M E G++ 
Sbjct: 345 GFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLP 404

Query: 407 DQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLL 466
           D+ TY   I   C   +++ A  L   +   G       Y+ LV GYC   + ++   L+
Sbjct: 405 DRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLM 464

Query: 467 DEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGI 509
           ++  S     DV  Y  LI   CK +++D A  L + M+  GI
Sbjct: 465 EKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGI 507



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 120/405 (29%), Positives = 186/405 (45%), Gaps = 38/405 (9%)

Query: 188 YKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCK 247
           +  M++ G   N   YN LI+A CK + +      L  M    +  D FTYN L+   C+
Sbjct: 78  FGAMLKSGAPPNRCTYNTLINAHCKLALLADARAALVRMREAGLAPDTFTYNCLMLGLCR 137

Query: 248 KGMHYEALAVQDRMERE-GISPDIVTYNSLIHGFCREGRMREARRLFRDIKGA--TPNHV 304
            G+   A  +  +M R  G   D  +Y  LI G C  GR+ +A R+F  +      P   
Sbjct: 138 AGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAKMSRGWCRPGVH 197

Query: 305 TYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM 364
           TYT L+DG C+   + EA  L   M  KGV P VVTYN+++  LC+EGR  D  +LL +M
Sbjct: 198 TYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKM 257

Query: 365 NEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEM 424
             ++ +PD  T   +++  CK G      KV +  +  G+ L+  TY ALI+G+CK  +M
Sbjct: 258 EIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYCKGGDM 317

Query: 425 DIA-------------------KELLFG----------------MLDAGFSPSYCSYSWL 449
             A                    E++ G                M  AG SP+  +++ L
Sbjct: 318 KAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSL 377

Query: 450 VDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGI 509
           + G C+    +  L+LLD     G+  D   Y   I   C + +++ A  LF+ +   GI
Sbjct: 378 ISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGI 437

Query: 510 LGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSF 554
              +VIYTSL + Y + G+  +   +++ M     M  +  Y + 
Sbjct: 438 KAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTL 482



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 112/396 (28%), Positives = 171/396 (43%), Gaps = 53/396 (13%)

Query: 170 VLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFK 229
            L+N   K         V + M +  V   +  +N +IH  C    V K    L +M   
Sbjct: 306 ALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGA 365

Query: 230 DVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA 289
            +  +  T+N+LI+  C  G    AL + D ME  G+ PD  TY   I   C EG++ EA
Sbjct: 366 GLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEA 425

Query: 290 RRLFR--DIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRK 347
             LF    +KG   ++V YT+L+ GYC+  D++ A  L E MA++   P V TYN+++  
Sbjct: 426 HSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLIDG 485

Query: 348 LCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLI--------------------NAYCKIG 387
           LCK  R+  A  LL++M ++ I P   T N LI                    ++ CK  
Sbjct: 486 LCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQMISSGCKPD 545

Query: 388 DTASAMKVKN-----------------RMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL 430
                +K+                    M EAG+  D  TY A+I  +  A   + A   
Sbjct: 546 KQTYTLKISTDWFEGATKEENIDMAVVEMHEAGVFPDVETYNAIIKAYVDAGLKEKAFFA 605

Query: 431 LFGMLDAGFSPSYCSYSWLVDGYCNKNNEEA--------------LLKLLDEFVSRGLCV 476
              ML     P   +YS L++  CNK++ +A              L +L ++        
Sbjct: 606 HVKMLSVPIDPDCTTYSILLNYMCNKDDSDAFDNEKIWKMVDVRNLQELFEQMCESDAAP 665

Query: 477 DVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGD 512
            +S Y+AL+R  C + +++  + L   MQGN IL D
Sbjct: 666 GISTYKALLRGLCNQCRLEEVEWLLLKMQGNSILLD 701



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 95/423 (22%), Positives = 170/423 (40%), Gaps = 53/423 (12%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           L++ D M  + ++P      + +++L  +   +    ++  +   G+ A+  +Y  L+H 
Sbjct: 391 LRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHG 450

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
            C+  D+D    L+ +M  ++   D+ TYNTLI   CK      A+ + D+M+++GI P 
Sbjct: 451 YCQVGDIDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPT 510

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLID-GYCRANDLEEALRLR 326
             T+N LI     + +  +A +++  +   G  P+  TYT  I   +      EE + + 
Sbjct: 511 TCTFNILIKQMLWDKKHADAAKMYEQMISSGCKPDKQTYTLKISTDWFEGATKEENIDMA 570

Query: 327 EV-MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC- 384
            V M   GV+P V TYN+I++     G    A     +M    I PD  T + L+N  C 
Sbjct: 571 VVEMHEAGVFPDVETYNAIIKAYVDAGLKEKAFFAHVKMLSVPIDPDCTTYSILLNYMCN 630

Query: 385 -------------KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
                        K+ D  +  ++  +M E+       TYKAL+ G C    ++  + LL
Sbjct: 631 KDDSDAFDNEKIWKMVDVRNLQELFEQMCESDAAPGISTYKALLRGLCNQCRLEEVEWLL 690

Query: 432 FGM------LD-----------------------------AGFSPSYCSYSWLVDGYCNK 456
             M      LD                               F P   S   L+ G C+ 
Sbjct: 691 LKMQGNSILLDEDMSDYLLGCYCNLEMYREACEQFRSMAHQSFQPGLKSCCLLLSGLCDS 750

Query: 457 NNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIY 516
            +    + +  + +  G   D  V++ LI    +K        + ++M     +  +  Y
Sbjct: 751 GDHGMAVSIFSDMLGLGYNYDEVVWKLLIDCLHEKGHAGACLEMLSVMDAKKCVASTRTY 810

Query: 517 TSL 519
            SL
Sbjct: 811 ASL 813



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 84/376 (22%), Positives = 148/376 (39%), Gaps = 24/376 (6%)

Query: 132 VLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKM 191
           + + LV  Y  +        + ++M   N MP +H    L++ L K +  D    +  KM
Sbjct: 443 IYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKM 502

Query: 192 VQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMH 251
            + G+      +N+LI             K+  +M     + D  TY   I+    +G  
Sbjct: 503 KKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQMISSGCKPDKQTYTLKISTDWFEGAT 562

Query: 252 YEA---LAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGAT----PNHV 304
            E    +AV + M   G+ PD+ TYN++I  +   G   +A   F  +K  +    P+  
Sbjct: 563 KEENIDMAVVE-MHEAGVFPDVETYNAIIKAYVDAGLKEKA--FFAHVKMLSVPIDPDCT 619

Query: 305 TYTTLIDGYCRAND--------------LEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
           TY+ L++  C  +D              +     L E M      PG+ TY ++LR LC 
Sbjct: 620 TYSILLNYMCNKDDSDAFDNEKIWKMVDVRNLQELFEQMCESDAAPGISTYKALLRGLCN 679

Query: 351 EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
           + R+ +   LL +M    I  D    + L+  YC +     A +    M          +
Sbjct: 680 QCRLEEVEWLLLKMQGNSILLDEDMSDYLLGCYCNLEMYREACEQFRSMAHQSFQPGLKS 739

Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFV 470
              L+ G C + +  +A  +   ML  G++     +  L+D    K +  A L++L    
Sbjct: 740 CCLLLSGLCDSGDHGMAVSIFSDMLGLGYNYDEVVWKLLIDCLHEKGHAGACLEMLSVMD 799

Query: 471 SRGLCVDVSVYRALIR 486
           ++        Y +L+R
Sbjct: 800 AKKCVASTRTYASLVR 815



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 108/251 (43%), Gaps = 1/251 (0%)

Query: 315 RANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNV 374
           RA  L   L     M   G  P   TYN+++   CK   + DA   L  M E  +APD  
Sbjct: 67  RAPRLAHLLASFGAMLKSGAPPNRCTYNTLINAHCKLALLADARAALVRMREAGLAPDTF 126

Query: 375 TCNTLINAYCKIGDTASAMKVKNRMLEA-GLMLDQFTYKALIHGFCKAKEMDIAKELLFG 433
           T N L+   C+ G  A+A  +  +M    G   D+++Y  LI G C A  +D A  +   
Sbjct: 127 TYNCLMLGLCRAGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAK 186

Query: 434 MLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEK 493
           M      P   +Y+ L+DG C          LL E V++G+  +V  Y ALI   C++ +
Sbjct: 187 MSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGR 246

Query: 494 VDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRS 553
            D   +L   M+      D   YT + +   + G+    + +L +   + + + +  Y +
Sbjct: 247 FDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNA 306

Query: 554 FSASYAKDNEI 564
               Y K  ++
Sbjct: 307 LINGYCKGGDM 317



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 82/378 (21%), Positives = 132/378 (34%), Gaps = 66/378 (17%)

Query: 54  CHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTP 113
           C +  +  AF    + A  N    + ++ T+I  L K K    A ++L+K+  +    T 
Sbjct: 452 CQVGDIDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTT 511

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
              N L+K           + W        K   D  ++++QM      P     T+ ++
Sbjct: 512 CTFNILIK----------QMLW-------DKKHADAAKMYEQMISSGCKPDKQTYTLKIS 554

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
                  TD      K+        NI +  V +H      DV+                
Sbjct: 555 -------TDWFEGATKE-------ENIDMAVVEMHEAGVFPDVE---------------- 584

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREG--------- 284
              TYN +I  Y   G+  +A     +M    I PD  TY+ L++  C +          
Sbjct: 585 ---TYNAIIKAYVDAGLKEKAFFAHVKMLSVPIDPDCTTYSILLNYMCNKDDSDAFDNEK 641

Query: 285 -----RMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPG 337
                 +R  + LF  +    A P   TY  L+ G C    LEE   L   M    +   
Sbjct: 642 IWKMVDVRNLQELFEQMCESDAAPGISTYKALLRGLCNQCRLEEVEWLLLKMQGNSILLD 701

Query: 338 VVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKN 397
               + +L   C     R+A      M  +   P   +C  L++  C  GD   A+ + +
Sbjct: 702 EDMSDYLLGCYCNLEMYREACEQFRSMAHQSFQPGLKSCCLLLSGLCDSGDHGMAVSIFS 761

Query: 398 RMLEAGLMLDQFTYKALI 415
            ML  G   D+  +K LI
Sbjct: 762 DMLGLGYNYDEVVWKLLI 779


>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
          Length = 897

 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 107/328 (32%), Positives = 176/328 (53%), Gaps = 3/328 (0%)

Query: 195 GVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFK-DVRADLFTYNTLIALYCKKGMHYE 253
           G+  N + Y  +I   CK   VD+  K+  EM  K +V+ +   YN LI  YC +G    
Sbjct: 545 GIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDT 604

Query: 254 ALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLID 311
           AL  +DRM   G++  + TYN L+H    +GR  EA  L  ++  KG  P+  TY  LI+
Sbjct: 605 ALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILIN 664

Query: 312 GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAP 371
           G+C+  ++++AL + E M+ +GV   VVTY +++  L K+G++++ ++L +E   + I P
Sbjct: 665 GHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRP 724

Query: 372 DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
           D V  N LIN++   G+   A ++   M +  +  D  TY  L+ G C    +D A++L+
Sbjct: 725 DLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLI 784

Query: 432 FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
             M + G  P   +Y+ L+ GY  K + +  L++ +E +++G    +  Y ALI+  CK 
Sbjct: 785 DEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKN 844

Query: 492 EKVDYAQRLFNLMQGNGILGDSVIYTSL 519
            + D A+ +   M  NGI  D   Y SL
Sbjct: 845 GQGDDAENMVKEMVENGITPDDSTYISL 872



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 101/332 (30%), Positives = 175/332 (52%), Gaps = 3/332 (0%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHN-LMPHLHACTVLLNSLAKDRLTDMVWKV 187
           N +    ++  +  +    + ++VFD+M     + P       L+         D     
Sbjct: 549 NQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLY 608

Query: 188 YKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCK 247
             +MV+ GV   +  YN+L+HA        +  +L+ EM  K +  D+FTYN LI  +CK
Sbjct: 609 RDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCK 668

Query: 248 KGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVT 305
           +G   +AL + + M R G+   +VTY +LI+   ++G+++E  +LF +   +G  P+ V 
Sbjct: 669 EGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVL 728

Query: 306 YTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMN 365
           Y  LI+ +  + +++ A  +   M  K + P  VTYN+++R LC  GR+ +A +L++EM 
Sbjct: 729 YNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMT 788

Query: 366 EKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMD 425
           E+ I PD VT NTLI+ Y   GD   A++++N M+  G      TY ALI G CK  + D
Sbjct: 789 ERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGD 848

Query: 426 IAKELLFGMLDAGFSPSYCSYSWLVDGYCNKN 457
            A+ ++  M++ G +P   +Y  L++G   ++
Sbjct: 849 DAENMVKEMVENGITPDDSTYISLIEGLTTED 880



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 128/462 (27%), Positives = 218/462 (47%), Gaps = 12/462 (2%)

Query: 106 LRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHL 165
            +  LS    L+ L  +       S + + L+   A ++     L+++ +M+  +L    
Sbjct: 393 FKSVLSADKALSPLAVLPHLDGAPSSLPNLLLTASAAVRPHATSLRLYSRMKSLSLPIST 452

Query: 166 HACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCE 225
            +   LL++L     +   + ++  M +L +      +N+++   C +    +  +LL +
Sbjct: 453 ASLHPLLSALP----SAPAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQ 508

Query: 226 MEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRM-EREGISPDIVTYNSLIHGFCREG 284
           M     R +  TYNT+IA +C +G    AL +   M ER GI+P+  TY ++I G+C+ G
Sbjct: 509 MP----RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVG 564

Query: 285 RMREARRLFRDI--KGAT-PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTY 341
           R+ EA ++F ++  KG   P  V Y  LI GYC    L+ AL  R+ M  +GV   V TY
Sbjct: 565 RVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATY 624

Query: 342 NSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLE 401
           N ++  L  +GR  +A  L+ EM  K +APD  T N LIN +CK G+   A+++   M  
Sbjct: 625 NLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSR 684

Query: 402 AGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEA 461
            G+     TY ALI+   K  ++    +L    +  G  P    Y+ L++ +    N + 
Sbjct: 685 RGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDR 744

Query: 462 LLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAY 521
             +++ E   + +  D   Y  L+R  C   +VD A++L + M   GI  D V Y +L  
Sbjct: 745 AFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLIS 804

Query: 522 AYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNE 563
            Y   G+ K    I ++M  +    TL  Y +      K+ +
Sbjct: 805 GYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQ 846



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 114/421 (27%), Positives = 190/421 (45%), Gaps = 29/421 (6%)

Query: 161 LMPHLHACT-----VLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKS-- 213
           ++PHL         +LL + A  R      ++Y +M  L +  +    + L+ A   +  
Sbjct: 408 VLPHLDGAPSSLPNLLLTASAAVRPHATSLRLYSRMKSLSLPISTASLHPLLSALPSAPA 467

Query: 214 ----SDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
               +D+ ++   LC            T+N ++   C  G    AL +  +M R    P+
Sbjct: 468 FALFADMFRLRLPLCTT----------TFNIMLRHLCSAGKPARALELLRQMPR----PN 513

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDIK---GATPNHVTYTTLIDGYCRANDLEEALRLR 326
            VTYN++I GFC  GR++ A  + R+++   G  PN  TY T+I G+C+   ++EA+++ 
Sbjct: 514 AVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVF 573

Query: 327 EVMAAKG-VYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
           + M  KG V P  V YN+++   C +G++  A    + M E+ +A    T N L++A   
Sbjct: 574 DEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFM 633

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            G    A ++   M   GL  D FTY  LI+G CK   +  A E+   M   G   +  +
Sbjct: 634 DGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVT 693

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+ L+     K   +   KL DE V RG+  D+ +Y ALI        +D A  +   M+
Sbjct: 694 YTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEME 753

Query: 506 GNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEIL 565
              I  D V Y +L       G       ++D+M  R +   L  Y +  + Y+   ++ 
Sbjct: 754 KKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVK 813

Query: 566 D 566
           D
Sbjct: 814 D 814



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 87/264 (32%), Positives = 135/264 (51%), Gaps = 2/264 (0%)

Query: 170 VLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFK 229
           +L+++L  D      +++ ++M   G+  ++  YN+LI+  CK  +V K  ++   M  +
Sbjct: 626 LLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRR 685

Query: 230 DVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA 289
            VRA + TY  LI    KKG   E   + D   R GI PD+V YN+LI+     G +  A
Sbjct: 686 GVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRA 745

Query: 290 RRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRK 347
             +  ++  K   P+ VTY TL+ G C    ++EA +L + M  +G+ P +VTYN+++  
Sbjct: 746 FEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISG 805

Query: 348 LCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLD 407
              +G ++DA R+ NEM  K   P  +T N LI   CK G    A  +   M+E G+  D
Sbjct: 806 YSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPD 865

Query: 408 QFTYKALIHGFCKAKEMDIAKELL 431
             TY +LI G     E  I  E L
Sbjct: 866 DSTYISLIEGLTTEDERAIDDERL 889



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 50/209 (23%), Positives = 81/209 (38%), Gaps = 17/209 (8%)

Query: 75  KHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLS 134
           + ++ ++  +I+ L+K    +    + ++   R       + NAL+        NSH  S
Sbjct: 688 RATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALI--------NSHSTS 739

Query: 135 WLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQL 194
             +             ++  +M    + P       L+  L      D   K+  +M + 
Sbjct: 740 GNI---------DRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTER 790

Query: 195 GVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEA 254
           G+  ++  YN LI       DV    ++  EM  K     L TYN LI   CK G   +A
Sbjct: 791 GIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDA 850

Query: 255 LAVQDRMEREGISPDIVTYNSLIHGFCRE 283
             +   M   GI+PD  TY SLI G   E
Sbjct: 851 ENMVKEMVENGITPDDSTYISLIEGLTTE 879


>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
 gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
          Length = 528

 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 107/328 (32%), Positives = 176/328 (53%), Gaps = 3/328 (0%)

Query: 195 GVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFK-DVRADLFTYNTLIALYCKKGMHYE 253
           G+  N + Y  +I   CK   VD+  K+  EM  K +V+ +   YN LI  YC +G    
Sbjct: 176 GIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDT 235

Query: 254 ALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLID 311
           AL  +DRM   G++  + TYN L+H    +GR  EA  L  ++  KG  P+  TY  LI+
Sbjct: 236 ALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILIN 295

Query: 312 GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAP 371
           G+C+  ++++AL + E M+ +GV   VVTY +++  L K+G++++ ++L +E   + I P
Sbjct: 296 GHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRP 355

Query: 372 DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
           D V  N LIN++   G+   A ++   M +  +  D  TY  L+ G C    +D A++L+
Sbjct: 356 DLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLI 415

Query: 432 FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
             M + G  P   +Y+ L+ GY  K + +  L++ +E +++G    +  Y ALI+  CK 
Sbjct: 416 DEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKN 475

Query: 492 EKVDYAQRLFNLMQGNGILGDSVIYTSL 519
            + D A+ +   M  NGI  D   Y SL
Sbjct: 476 GQGDDAENMVKEMVENGITPDDSTYISL 503



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 101/332 (30%), Positives = 175/332 (52%), Gaps = 3/332 (0%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHN-LMPHLHACTVLLNSLAKDRLTDMVWKV 187
           N +    ++  +  +    + ++VFD+M     + P       L+         D     
Sbjct: 180 NQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLY 239

Query: 188 YKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCK 247
             +MV+ GV   +  YN+L+HA        +  +L+ EM  K +  D+FTYN LI  +CK
Sbjct: 240 RDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCK 299

Query: 248 KGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVT 305
           +G   +AL + + M R G+   +VTY +LI+   ++G+++E  +LF +   +G  P+ V 
Sbjct: 300 EGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVL 359

Query: 306 YTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMN 365
           Y  LI+ +  + +++ A  +   M  K + P  VTYN+++R LC  GR+ +A +L++EM 
Sbjct: 360 YNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMT 419

Query: 366 EKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMD 425
           E+ I PD VT NTLI+ Y   GD   A++++N M+  G      TY ALI G CK  + D
Sbjct: 420 ERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGD 479

Query: 426 IAKELLFGMLDAGFSPSYCSYSWLVDGYCNKN 457
            A+ ++  M++ G +P   +Y  L++G   ++
Sbjct: 480 DAENMVKEMVENGITPDDSTYISLIEGLTTED 511



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 128/462 (27%), Positives = 218/462 (47%), Gaps = 12/462 (2%)

Query: 106 LRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHL 165
            +  LS    L+ L  +       S + + L+   A ++     L+++ +M+  +L    
Sbjct: 24  FKSVLSADKALSPLAVLPHLDGAPSSLPNLLLTASAAVRPHATSLRLYSRMKSLSLPIST 83

Query: 166 HACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCE 225
            +   LL++L     +   + ++  M +L +      +N+++   C +    +  +LL +
Sbjct: 84  ASLHPLLSALP----SAPAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQ 139

Query: 226 MEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRM-EREGISPDIVTYNSLIHGFCREG 284
           M     R +  TYNT+IA +C +G    AL +   M ER GI+P+  TY ++I G+C+ G
Sbjct: 140 MP----RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVG 195

Query: 285 RMREARRLFRDI--KGAT-PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTY 341
           R+ EA ++F ++  KG   P  V Y  LI GYC    L+ AL  R+ M  +GV   V TY
Sbjct: 196 RVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATY 255

Query: 342 NSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLE 401
           N ++  L  +GR  +A  L+ EM  K +APD  T N LIN +CK G+   A+++   M  
Sbjct: 256 NLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSR 315

Query: 402 AGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEA 461
            G+     TY ALI+   K  ++    +L    +  G  P    Y+ L++ +    N + 
Sbjct: 316 RGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDR 375

Query: 462 LLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAY 521
             +++ E   + +  D   Y  L+R  C   +VD A++L + M   GI  D V Y +L  
Sbjct: 376 AFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLIS 435

Query: 522 AYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNE 563
            Y   G+ K    I ++M  +    TL  Y +      K+ +
Sbjct: 436 GYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQ 477



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 117/421 (27%), Positives = 193/421 (45%), Gaps = 29/421 (6%)

Query: 161 LMPHLHACT-----VLLNSLAKDRLTDMVWKVYKKMVQLGV---VANIH-LYNVLIHACC 211
           ++PHL         +LL + A  R      ++Y +M  L +    A++H L + L  A  
Sbjct: 39  VLPHLDGAPSSLPNLLLTASAAVRPHATSLRLYSRMKSLSLPISTASLHPLLSALPSAPA 98

Query: 212 KS--SDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
            +  +D+ ++   LC            T+N ++   C  G    AL +  +M R    P+
Sbjct: 99  FALFADMFRLRLPLCTT----------TFNIMLRHLCSAGKPARALELLRQMPR----PN 144

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDIK---GATPNHVTYTTLIDGYCRANDLEEALRLR 326
            VTYN++I GFC  GR++ A  + R+++   G  PN  TY T+I G+C+   ++EA+++ 
Sbjct: 145 AVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVF 204

Query: 327 EVMAAKG-VYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
           + M  KG V P  V YN+++   C +G++  A    + M E+ +A    T N L++A   
Sbjct: 205 DEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFM 264

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            G    A ++   M   GL  D FTY  LI+G CK   +  A E+   M   G   +  +
Sbjct: 265 DGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVT 324

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+ L+     K   +   KL DE V RG+  D+ +Y ALI        +D A  +   M+
Sbjct: 325 YTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEME 384

Query: 506 GNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEIL 565
              I  D V Y +L       G       ++D+M  R +   L  Y +  + Y+   ++ 
Sbjct: 385 KKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVK 444

Query: 566 D 566
           D
Sbjct: 445 D 445



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 87/264 (32%), Positives = 135/264 (51%), Gaps = 2/264 (0%)

Query: 170 VLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFK 229
           +L+++L  D      +++ ++M   G+  ++  YN+LI+  CK  +V K  ++   M  +
Sbjct: 257 LLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRR 316

Query: 230 DVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA 289
            VRA + TY  LI    KKG   E   + D   R GI PD+V YN+LI+     G +  A
Sbjct: 317 GVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRA 376

Query: 290 RRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRK 347
             +  ++  K   P+ VTY TL+ G C    ++EA +L + M  +G+ P +VTYN+++  
Sbjct: 377 FEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISG 436

Query: 348 LCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLD 407
              +G ++DA R+ NEM  K   P  +T N LI   CK G    A  +   M+E G+  D
Sbjct: 437 YSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPD 496

Query: 408 QFTYKALIHGFCKAKEMDIAKELL 431
             TY +LI G     E  I  E L
Sbjct: 497 DSTYISLIEGLTTEDERAIDDERL 520



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/209 (23%), Positives = 81/209 (38%), Gaps = 17/209 (8%)

Query: 75  KHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLS 134
           + ++ ++  +I+ L+K    +    + ++   R       + NAL+        NSH  S
Sbjct: 319 RATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALI--------NSHSTS 370

Query: 135 WLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQL 194
             +             ++  +M    + P       L+  L      D   K+  +M + 
Sbjct: 371 GNI---------DRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTER 421

Query: 195 GVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEA 254
           G+  ++  YN LI       DV    ++  EM  K     L TYN LI   CK G   +A
Sbjct: 422 GIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDA 481

Query: 255 LAVQDRMEREGISPDIVTYNSLIHGFCRE 283
             +   M   GI+PD  TY SLI G   E
Sbjct: 482 ENMVKEMVENGITPDDSTYISLIEGLTTE 510


>gi|356519743|ref|XP_003528529.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Glycine max]
          Length = 556

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 112/370 (30%), Positives = 192/370 (51%), Gaps = 2/370 (0%)

Query: 149 GLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIH 208
           G ++   +    L P++   T L++   KD    +   ++ KM +LG+V N H Y+VL++
Sbjct: 177 GFRLLAMLEEFGLSPNVVIYTTLIDGCCKDGNVMLAKNLFCKMNRLGLVPNPHTYSVLMN 236

Query: 209 ACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISP 268
              K     +  ++   M+   +  + + YN LI+ YC  GM  +A  V   M  +GI+ 
Sbjct: 237 GFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIAC 296

Query: 269 DIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLR 326
            ++TYN LI G CR  +  EA +L   +   G +PN VTY  LI+G+C    ++ A+RL 
Sbjct: 297 GVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLF 356

Query: 327 EVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKI 386
             + + G+ P +VTYN+++    K   +  A  L+ EM E+ IAP  VT   LI+A+ ++
Sbjct: 357 NQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARL 416

Query: 387 GDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSY 446
             T  A ++ + M ++GL+ D +TY  L+HG C    M  A +L   + +    P+   Y
Sbjct: 417 NHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQPNSVIY 476

Query: 447 SWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQG 506
           + ++ GYC + +    L+LL+E V  G+  +V+ + + I   C+ EK   A+ L   M  
Sbjct: 477 NTMIHGYCKEGSSYRALRLLNEMVQSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMIN 536

Query: 507 NGILGDSVIY 516
           +G+     +Y
Sbjct: 537 SGLKPSVSLY 546



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 114/442 (25%), Positives = 216/442 (48%), Gaps = 5/442 (1%)

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
           Y +   T   L     M     +P  +    LL  L +    D  W ++ ++ +  VV +
Sbjct: 99  YVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLLCLLIRSNYFDKAWWIFNEL-KSKVVLD 157

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
            + + ++I  CC++    K  +LL  +E   +  ++  Y TLI   CK G    A  +  
Sbjct: 158 AYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKDGNVMLAKNLFC 217

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRAN 317
           +M R G+ P+  TY+ L++GF ++G  RE  +++ ++K  G  PN   Y  LI  YC   
Sbjct: 218 KMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNDG 277

Query: 318 DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCN 377
            +++A ++   M  KG+  GV+TYN ++  LC+  +  +A +L++++N+  ++P+ VT N
Sbjct: 278 MVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYN 337

Query: 378 TLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA 437
            LIN +C +    SA+++ N++  +GL     TY  LI G+ K + +  A +L+  M + 
Sbjct: 338 ILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEER 397

Query: 438 GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYA 497
             +PS  +Y+ L+D +   N+ E   ++       GL  DV  Y  L+   C    +  A
Sbjct: 398 CIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEA 457

Query: 498 QRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSAS 557
            +LF  +    +  +SVIY ++ + Y + G       +L++M +  ++  +  + S    
Sbjct: 458 SKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQSGMVPNVASFCSTIGL 517

Query: 558 YAKDNEI--LDLFWSHVVDRGL 577
             +D +    +L    +++ GL
Sbjct: 518 LCRDEKWKEAELLLGQMINSGL 539



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 106/395 (26%), Positives = 184/395 (46%), Gaps = 3/395 (0%)

Query: 171 LLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKD 230
           ++N+      TD        M+  G V   + +N L+    +S+  DK   +  E++ K 
Sbjct: 95  VVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLLCLLIRSNYFDKAWWIFNELKSK- 153

Query: 231 VRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREAR 290
           V  D +++  +I   C+ G   +   +   +E  G+SP++V Y +LI G C++G +  A+
Sbjct: 154 VVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKDGNVMLAK 213

Query: 291 RLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
            LF  +   G  PN  TY+ L++G+ +     E  ++ E M   G+ P    YN ++ + 
Sbjct: 214 NLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEY 273

Query: 349 CKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ 408
           C +G +  A ++  EM EK IA   +T N LI   C+      A+K+ +++ + GL  + 
Sbjct: 274 CNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNI 333

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
            TY  LI+GFC  ++MD A  L   +  +G SP+  +Y+ L+ GY    N    L L+ E
Sbjct: 334 VTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKE 393

Query: 469 FVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
              R +      Y  LI  F +    + A  + +LM+ +G++ D   Y+ L +     G 
Sbjct: 394 MEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGN 453

Query: 529 PKACSDILDDMYRRRLMITLKIYRSFSASYAKDNE 563
            K  S +   +    L     IY +    Y K+  
Sbjct: 454 MKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGS 488



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/288 (24%), Positives = 111/288 (38%), Gaps = 72/288 (25%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N++  + L+  Y N  M     +VF +MR   +   +    +L+  L + +      K+ 
Sbjct: 262 NAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLV 321

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCK- 247
            K+ ++G+  NI  YN+LI+  C    +D   +L  +++   +   L TYNTLIA Y K 
Sbjct: 322 HKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKV 381

Query: 248 ----------KGMHYEALA------------------------VQDRMEREGISPDIVTY 273
                     K M    +A                        +   ME+ G+ PD+ TY
Sbjct: 382 ENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTY 441

Query: 274 NSLIHGFCREGRMREARRLFRDIKGA--TPNHVTYTTLIDGYCRANDLEEALRLREVMAA 331
           + L+HG C  G M+EA +LF+ +      PN V Y T+I GYC+      ALRL   M  
Sbjct: 442 SVLLHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQ 501

Query: 332 KGVYP-----------------------------------GVVTYNSI 344
            G+ P                                    V  Y  +
Sbjct: 502 SGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSVSLYKMV 549


>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 123/468 (26%), Positives = 235/468 (50%), Gaps = 28/468 (5%)

Query: 50  LYNC-CHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRD 108
           L NC CH+  ++  F   A+     Y     +  T+I  L      K A +  +K+  + 
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 159

Query: 109 F----LSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPH 164
           F    +S  +++N + KI D                     T+  +++  ++      P+
Sbjct: 160 FQLNQVSYATLINGVCKIGD---------------------TRGAIKLLRKIDGRLTKPN 198

Query: 165 LHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLC 224
           +   + ++++L K +L    + ++ +M   G+ A++  Y+ LI+  C    + +   LL 
Sbjct: 199 VEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLN 258

Query: 225 EMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREG 284
           EM  K +  +++TYN L+   CK+G   EA +V   M +  + PD++TY++L+ G+    
Sbjct: 259 EMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVY 318

Query: 285 RMREARRLFR--DIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYN 342
            +++A+ +F    + G TP+  TYT LI+G+C+   ++EAL L + M  K + PG+VTY+
Sbjct: 319 EVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYS 378

Query: 343 SILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEA 402
           S++  LCK GRI     L++EM ++    D +T ++LI+  CK G    A+ + N+M + 
Sbjct: 379 SLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQ 438

Query: 403 GLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEAL 462
            +  + FT+  L+ G CK   +  A+E+   +L  G+  +  +Y+ +++G+C +   E  
Sbjct: 439 EIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEA 498

Query: 463 LKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGIL 510
           L +L +    G   +   +  +I    KK++ D A++L   M   G+L
Sbjct: 499 LTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGLL 546



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 118/434 (27%), Positives = 214/434 (49%), Gaps = 4/434 (0%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           SVL  ++K    PD  +  L+ L+         +  L   D++       +  +   L+N
Sbjct: 115 SVLAKILKRGYPPD--TVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLIN 172

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
            + K   T    K+ +K+       N+ +Y+ +I A CK   V +   L  EM  K + A
Sbjct: 173 GVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISA 232

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           D+ TY+TLI  +C +G   EA+ + + M  + I+P++ TYN L+   C+EG+++EA+ + 
Sbjct: 233 DVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVL 292

Query: 294 RDIKGA--TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
             +  A   P+ +TY+TL+DGY    ++++A  +   M+  GV P V TY  ++   CK 
Sbjct: 293 AVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKN 352

Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
             + +A  L  EM++K + P  VT ++LI+  CK G       + + M + G   D  TY
Sbjct: 353 KMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITY 412

Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
            +LI G CK   +D A  L   M D    P+  +++ L+DG C     +   ++  + ++
Sbjct: 413 SSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLT 472

Query: 472 RGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKA 531
           +G  ++V  Y  +I   CK+  ++ A  + + M+ NG + ++  + ++  A ++  E   
Sbjct: 473 KGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDK 532

Query: 532 CSDILDDMYRRRLM 545
              +L  M  R L+
Sbjct: 533 AEKLLRQMIARGLL 546



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 127/439 (28%), Positives = 194/439 (44%), Gaps = 37/439 (8%)

Query: 141 ANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANI 200
            +++   D +  F++M      P +     +L+S AK +       +  ++   G+  ++
Sbjct: 35  PSIQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDL 94

Query: 201 HLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDR 260
              N+LI+  C    +     +L ++  +    D  T NTLI   C KG   +AL   D+
Sbjct: 95  ITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDK 154

Query: 261 MEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKG--ATPNHVTYTTLIDGYCRAND 318
           +  +G   + V+Y +LI+G C+ G  R A +L R I G    PN   Y+T+ID  C+   
Sbjct: 155 LLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQL 214

Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT 378
           + EA  L   M  KG+   VVTY++++   C EG++++A  LLNEM  K I P+  T N 
Sbjct: 215 VSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNI 274

Query: 379 LINAYCKIGDTASAMKVKNRMLEA-----------------------------------G 403
           L++A CK G    A  V   ML+A                                   G
Sbjct: 275 LVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMG 334

Query: 404 LMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALL 463
           +  D  TY  LI+GFCK K +D A  L   M      P   +YS L+DG C       + 
Sbjct: 335 VTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVW 394

Query: 464 KLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAY 523
            L+DE   RG   DV  Y +LI   CK   +D A  LFN M+   I  +   +T L    
Sbjct: 395 DLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGL 454

Query: 524 WRAGEPKACSDILDDMYRR 542
            + G  K   ++  D+  +
Sbjct: 455 CKGGRLKDAQEVFQDLLTK 473



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 103/229 (44%)

Query: 336 PGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKV 395
           P ++ +N IL    K      A  L + +  K I PD +T N LIN +C +G       V
Sbjct: 57  PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSV 116

Query: 396 KNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCN 455
             ++L+ G   D  T   LI G C   ++  A      +L  GF  +  SY+ L++G C 
Sbjct: 117 LAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCK 176

Query: 456 KNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVI 515
             +    +KLL +   R    +V +Y  +I   CK + V  A  LF+ M   GI  D V 
Sbjct: 177 IGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVT 236

Query: 516 YTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
           Y++L Y +   G+ K    +L++M  + +   +  Y     +  K+ ++
Sbjct: 237 YSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKV 285


>gi|42562903|ref|NP_176512.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|114050643|gb|ABI49471.1| At1g63230 [Arabidopsis thaliana]
 gi|332195952|gb|AEE34073.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 323

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 165/309 (53%), Gaps = 6/309 (1%)

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
           P +   T L+N L  +        +  +MV+ G       Y  +I+  CK  D +    L
Sbjct: 8   PDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGH----QPYGTIINGLCKMGDTESALNL 63

Query: 223 LCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR 282
           L +ME   ++A +  YN +I   CK G H  A  +   M  +GI PD++TY+ +I  FCR
Sbjct: 64  LSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCR 123

Query: 283 EGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVT 340
            GR  +A +L RD+  +   P+ VT++ LI+   +   + EA  +   M  +G++P  +T
Sbjct: 124 SGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTIT 183

Query: 341 YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML 400
           YNS++   CK+ R+ DA R+L+ M  K  +PD VT +TLIN YCK     + M++   M 
Sbjct: 184 YNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMH 243

Query: 401 EAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEE 460
             G++ +  TY  LIHGFC+  ++D A++LL  M+ +G +P+Y ++  ++   C+K    
Sbjct: 244 RRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELR 303

Query: 461 ALLKLLDEF 469
               +L++ 
Sbjct: 304 KAFAILEDL 312



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 99/312 (31%), Positives = 159/312 (50%), Gaps = 6/312 (1%)

Query: 232 RADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARR 291
           R D+ T+ TL+   C +G   +ALA+ DRM  EG  P    Y ++I+G C+ G    A  
Sbjct: 7   RPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESALN 62

Query: 292 LFRDIKGA--TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLC 349
           L   ++      + V Y  +ID  C+      A  L   M  KG++P V+TY+ ++   C
Sbjct: 63  LLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFC 122

Query: 350 KEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQF 409
           + GR  DA +LL +M E++I PD VT + LINA  K G  + A ++   ML  G+     
Sbjct: 123 RSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTI 182

Query: 410 TYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEF 469
           TY ++I GFCK   ++ AK +L  M     SP   ++S L++GYC     +  +++  E 
Sbjct: 183 TYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEM 242

Query: 470 VSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEP 529
             RG+  +   Y  LI  FC+   +D AQ L N+M  +G+  + + + S+  +     E 
Sbjct: 243 HRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKEL 302

Query: 530 KACSDILDDMYR 541
           +    IL+D+ +
Sbjct: 303 RKAFAILEDLQK 314



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 160/308 (51%), Gaps = 2/308 (0%)

Query: 261 MEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLE 320
           M   G  PD+VT+ +L++G C EGR+ +A  L    +     H  Y T+I+G C+  D E
Sbjct: 1   MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVD--RMVEEGHQPYGTIINGLCKMGDTE 58

Query: 321 EALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLI 380
            AL L   M    +   VV YN+I+ +LCK+G    A  L  EM++K I PD +T + +I
Sbjct: 59  SALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMI 118

Query: 381 NAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFS 440
           +++C+ G    A ++   M+E  +  D  T+ ALI+   K  ++  A+E+   ML  G  
Sbjct: 119 DSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIF 178

Query: 441 PSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRL 500
           P+  +Y+ ++DG+C ++      ++LD   S+    DV  +  LI  +CK ++VD    +
Sbjct: 179 PTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEI 238

Query: 501 FNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAK 560
           F  M   GI+ ++V YT+L + + + G+  A  D+L+ M    +      ++S  AS   
Sbjct: 239 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCS 298

Query: 561 DNEILDLF 568
             E+   F
Sbjct: 299 KKELRKAF 306



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 68/241 (28%), Positives = 129/241 (53%), Gaps = 2/241 (0%)

Query: 146 TQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNV 205
           T+  L +  +M   ++  H+     +++ L KD        ++ +M   G+  ++  Y+ 
Sbjct: 57  TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116

Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
           +I + C+S      E+LL +M  + +  D+ T++ LI    K+G   EA  +   M R G
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176

Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEAL 323
           I P  +TYNS+I GFC++ R+ +A+R+   +  K  +P+ VT++TLI+GYC+A  ++  +
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGM 236

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
            +   M  +G+    VTY +++   C+ G +  A  LLN M    +AP+ +T  +++ + 
Sbjct: 237 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASL 296

Query: 384 C 384
           C
Sbjct: 297 C 297



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 75/266 (28%), Positives = 145/266 (54%), Gaps = 15/266 (5%)

Query: 112 TPSVLNALVKIHDDPDGNSHVLSWLVIFYANL-KMTQDGLQV-----FDQMRVHNLMPHL 165
           T S LN L K+ +     +H+ + +VI+ A + ++ +DG  +     F +M    + P +
Sbjct: 57  TESALNLLSKMEE-----THIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDV 111

Query: 166 HACTVLLNSLAKD-RLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLC 224
              + +++S  +  R TD   ++ + M++  +  ++  ++ LI+A  K   V + E++  
Sbjct: 112 ITYSGMIDSFCRSGRWTD-AEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYG 170

Query: 225 EMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREG 284
           +M  + +     TYN++I  +CK+    +A  + D M  +  SPD+VT+++LI+G+C+  
Sbjct: 171 DMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAK 230

Query: 285 RMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYN 342
           R+     +F ++  +G   N VTYTTLI G+C+  DL+ A  L  VM + GV P  +T+ 
Sbjct: 231 RVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQ 290

Query: 343 SILRKLCKEGRIRDANRLLNEMNEKK 368
           S+L  LC +  +R A  +L ++ + +
Sbjct: 291 SMLASLCSKKELRKAFAILEDLQKSE 316



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/208 (21%), Positives = 96/208 (46%), Gaps = 23/208 (11%)

Query: 98  QNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMR 157
           ++M+E+    D ++  +++NALVK     +G                   +  +++  M 
Sbjct: 135 RDMIERQINPDVVTFSALINALVK-----EGK----------------VSEAEEIYGDML 173

Query: 158 VHNLMPHLHACTVLLNSLAK-DRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDV 216
              + P       +++   K DRL D   ++   M       ++  ++ LI+  CK+  V
Sbjct: 174 RRGIFPTTITYNSMIDGFCKQDRLND-AKRMLDSMASKSCSPDVVTFSTLINGYCKAKRV 232

Query: 217 DKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSL 276
           D   ++ CEM  + + A+  TY TLI  +C+ G    A  + + M   G++P+ +T+ S+
Sbjct: 233 DNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSM 292

Query: 277 IHGFCREGRMREARRLFRDIKGATPNHV 304
           +   C +  +R+A  +  D++ +  +H+
Sbjct: 293 LASLCSKKELRKAFAILEDLQKSEGHHL 320


>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
 gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
          Length = 552

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 133/451 (29%), Positives = 215/451 (47%), Gaps = 23/451 (5%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHV 132
            ++ ++ ++ T+I  L ++        +LE++A R         N LV        +   
Sbjct: 96  GFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEA 155

Query: 133 LSWLVIFYAN--------LKMTQDGL----------QVFDQMRV--HNLMPHLHACTVLL 172
            S L    AN          +   GL          +V D+M +    L P +     +L
Sbjct: 156 FSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVL 215

Query: 173 NSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVR 232
           + L K++       V+K+ ++ G   N+  Y+ LI    K + +D+  +LL +M     R
Sbjct: 216 DGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCR 275

Query: 233 ADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRL 292
           A+  TY+T++    K G   +A+ V  +M   G  PD VTYN+LI GF +  R+REA  L
Sbjct: 276 ANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGL 335

Query: 293 FRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
            R++   G  P+ VTYTTL  G CR+   +EA+ + + MAA+G  P  +TY+SI+  LCK
Sbjct: 336 LREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCK 395

Query: 351 EGRIRDANRLLNEM-NEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQF 409
            GR+ +A     +M  ++ +AP  +  + LI+  CK G    A +   RM+ AG + D  
Sbjct: 396 AGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVV 455

Query: 410 TYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEF 469
           T+  LI+G C A  +D   EL  GM + G  P   +Y+ LVD  C  +  +    L  + 
Sbjct: 456 TFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQM 515

Query: 470 VSRGLCVDVSVYRALIRRFCKKEKVDYAQRL 500
            S GL  D S  R +I    +  + + A+R+
Sbjct: 516 RSDGLSPDRSTRRTMIHGLLEVNRDEDAKRI 546



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 140/500 (28%), Positives = 222/500 (44%), Gaps = 26/500 (5%)

Query: 80  SHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIF 139
           ++  +I  L K +  K A ++ E+   +    T    N ++      DG           
Sbjct: 32  TYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMI------DG----------- 74

Query: 140 YANLKMTQDGLQVFDQMRVH-NLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVA 198
                  ++ L ++D M +H    P +   + L++ L +D   D   K+ ++M   G   
Sbjct: 75  LCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAP 134

Query: 199 NIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQ 258
           N   YN L++A        +   LL +M       +L T+  +I   CK+G    A  V 
Sbjct: 135 NAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVV 194

Query: 259 DRM--EREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYC 314
           D M     G+SPD++T+NS++ G C+E R+ +A  +F+    +G  PN VTY+TLIDG  
Sbjct: 195 DEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLS 254

Query: 315 RANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNV 374
           +   ++EAL+L   M   G     VTY++++  L K GR+ DA  +L +M +    PD V
Sbjct: 255 KMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAV 314

Query: 375 TCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGM 434
           T NTLI+ + K      A+ +   MLEAG      TY  L HG C++   D A E+L  M
Sbjct: 315 TYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYM 374

Query: 435 LDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVD-VSVYRALIRRFCKKEK 493
              G +P+  +YS +VDG C        L   ++     +    V  Y ALI   CK  K
Sbjct: 375 AARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGK 434

Query: 494 VDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRS 553
           +D A      M   G + D V ++ L      AG      ++   M  R  +  +  Y +
Sbjct: 435 IDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYAT 494

Query: 554 FS---ASYAKDNEILDLFWS 570
                   ++ +E  DLF  
Sbjct: 495 LVDRLCRASRVDEAFDLFQQ 514



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 122/377 (32%), Positives = 182/377 (48%), Gaps = 5/377 (1%)

Query: 171 LLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKD 230
           +++ L K R  D    ++K+MV   +  ++  Y  LI    K   V +   L  E   K 
Sbjct: 1   MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60

Query: 231 VRADLFTYNTLIALYCKKGMHYEALAVQDRMERE-GISPDIVTYNSLIHGFCREGRMREA 289
               + TYNT+I   CK G    AL + D M    G  P +VTY++LI G CR+  + + 
Sbjct: 61  CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120

Query: 290 RRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRK 347
            +L  ++  +G  PN VTY TL++        +EA  L E MAA G  P ++T+  I++ 
Sbjct: 121 CKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKG 180

Query: 348 LCKEGRIRDANRLLNEMN--EKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLM 405
           LCKEG I  A R+++EM   E  ++PD +T N++++  CK      A  V  R LE G  
Sbjct: 181 LCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCR 240

Query: 406 LDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKL 465
            +  TY  LI G  K  +MD A +LL  M++ G   +  +YS +VDG       E  + +
Sbjct: 241 PNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVV 300

Query: 466 LDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWR 525
           L +    G   D   Y  LI  F K++++  A  L   M   G     V YT+L +   R
Sbjct: 301 LRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCR 360

Query: 526 AGEPKACSDILDDMYRR 542
           +G      +ILD M  R
Sbjct: 361 SGRFDEAVEILDYMAAR 377



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 105/383 (27%), Positives = 181/383 (47%), Gaps = 5/383 (1%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           + +F QM    + P +     L++ L K R     + ++++    G    +  YN +I  
Sbjct: 15  ITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDG 74

Query: 210 CCKSSDVDKVEKLLCEMEFK-DVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISP 268
            CK   ++    L  +M      R  + TY+TLI   C+     +   + + M   G +P
Sbjct: 75  LCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAP 134

Query: 269 DIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLR 326
           + VTYN+L++    +GR +EA  L   +   G  P  +T+  +I G C+  ++E A R+ 
Sbjct: 135 NAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVV 194

Query: 327 E--VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           +   M   G+ P V+T+NS+L  LCKE RI DA+ +     E+   P+ VT +TLI+   
Sbjct: 195 DEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLS 254

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           K+     A+++  +M+E G   +  TY  ++ G  K   M+ A  +L  M DAG  P   
Sbjct: 255 KMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAV 314

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
           +Y+ L+DG+  +      + LL E +  G    V  Y  L    C+  + D A  + + M
Sbjct: 315 TYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYM 374

Query: 505 QGNGILGDSVIYTSLAYAYWRAG 527
              G   +++ Y+S+     +AG
Sbjct: 375 AARGCAPNAITYSSIVDGLCKAG 397



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 101/324 (31%), Positives = 157/324 (48%), Gaps = 3/324 (0%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D   VF +       P++   + L++ L+K    D   ++  KMV+LG  AN   Y+ ++
Sbjct: 226 DAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVV 285

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
               K   ++    +L +M       D  TYNTLI  + K+    EA+ +   M   G  
Sbjct: 286 DGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFH 345

Query: 268 PDIVTYNSLIHGFCREGRMREARRL--FRDIKGATPNHVTYTTLIDGYCRANDLEEALRL 325
           P +VTY +L HG CR GR  EA  +  +   +G  PN +TY++++DG C+A  + EAL  
Sbjct: 346 PSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGY 405

Query: 326 REVMAAKGVY-PGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
            E MA   V  P V+ Y++++  LCK G+I +A   L  M      PD VT + LIN  C
Sbjct: 406 FEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLC 465

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
             G   + +++   M E G + D  TY  L+   C+A  +D A +L   M   G SP   
Sbjct: 466 DAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRS 525

Query: 445 SYSWLVDGYCNKNNEEALLKLLDE 468
           +   ++ G    N +E   ++ DE
Sbjct: 526 TRRTMIHGLLEVNRDEDAKRIQDE 549



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 69/243 (28%), Positives = 116/243 (47%), Gaps = 5/243 (2%)

Query: 126 PDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVW 185
           PD  ++  + L+  +   +  ++ + +  +M      P +   T L + L +    D   
Sbjct: 311 PDAVTY--NTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAV 368

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRAD-LFTYNTLIAL 244
           ++   M   G   N   Y+ ++   CK+  V +      +M   +V A  +  Y+ LI  
Sbjct: 369 EILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDG 428

Query: 245 YCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPN 302
            CK G   EA    +RM R G  PD+VT++ LI+G C  GR+     LFR +  +G  P+
Sbjct: 429 LCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPD 488

Query: 303 HVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLN 362
            VTY TL+D  CRA+ ++EA  L + M + G+ P   T  +++  L +  R  DA R+ +
Sbjct: 489 MVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLLEVNRDEDAKRIQD 548

Query: 363 EMN 365
           E N
Sbjct: 549 EEN 551


>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
 gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
          Length = 624

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 112/382 (29%), Positives = 194/382 (50%), Gaps = 9/382 (2%)

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
           P      +LL  L +    +   ++  +M ++G V +  +YN LI    K+ D  +  K 
Sbjct: 8   PDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKF 67

Query: 223 LCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR 282
           L EM        + TY  ++   CK G   +A+ + D M  +G SP+I TYN ++ G C 
Sbjct: 68  LAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCE 127

Query: 283 EGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVT 340
           E ++ EA+++  +  ++G  P+ VTY + I G C+ + ++EA   R+ +A   V P VV+
Sbjct: 128 ERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEA---RKFLARMPVTPDVVS 184

Query: 341 YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML 400
           Y +++  LCK G +  A+R+L++M  +   PD VT ++LI+ +CK G+   AM + + ML
Sbjct: 185 YTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSML 244

Query: 401 EAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEE 460
           + G   +   Y +L+    +   +  A+++L  M   GF+P   SY+  +DG C     +
Sbjct: 245 KLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVK 304

Query: 461 ALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLA 520
               + D  V RG   + S Y  L+   CKK+++D A  L    +    + D ++YT L 
Sbjct: 305 KAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLL 364

Query: 521 YAYWRAGE-PKAC---SDILDD 538
               + G   +AC   S +LD+
Sbjct: 365 DGLCKGGRFDEACALFSKVLDE 386



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 118/398 (29%), Positives = 192/398 (48%), Gaps = 9/398 (2%)

Query: 191 MVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGM 250
           M+      +   + +L+   C+S+ ++K  +LL  M+      D   YN LI+ Y K   
Sbjct: 1   MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60

Query: 251 HYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTT 308
             +A      M +    P +VTY +++ G C+ GR ++A +L  ++  KG +PN  TY  
Sbjct: 61  FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNV 120

Query: 309 LIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKK 368
           +++G C    L+EA ++ E MA +G +P VVTYNS ++ LCK  R+ +A + L  M    
Sbjct: 121 IVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM---P 177

Query: 369 IAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAK 428
           + PD V+  T+IN  CK GD  SA ++ ++M   G   D  TY +LI GFCK  E++ A 
Sbjct: 178 VTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAM 237

Query: 429 ELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRF 488
            LL  ML  G  P+  +Y+ L+       +      +L E   RG   DV  Y A I   
Sbjct: 238 GLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGL 297

Query: 489 CKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITL 548
           CK E+V  A+ +F+ M   G   ++  Y+ L     +  E      +++    +  ++ +
Sbjct: 298 CKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDI 357

Query: 549 KIYRSFSASYAKD---NEILDLFWSHVVDRGLMSKHIF 583
            +Y        K    +E   LF S V+D  +    +F
Sbjct: 358 LLYTVLLDGLCKGGRFDEACALF-SKVLDEKICEPDVF 394



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 107/352 (30%), Positives = 179/352 (50%), Gaps = 1/352 (0%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           Q+  +M+    +P       L++  +K +     +K   +MV+   +  +  Y  ++   
Sbjct: 31  QLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGL 90

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           CK+       KLL EM  K    +++TYN ++   C++    EA  + + M   G  PD+
Sbjct: 91  CKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDV 150

Query: 271 VTYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMA 330
           VTYNS I G C+  R+ EAR+    +   TP+ V+YTT+I+G C++ DL+ A R+ + M 
Sbjct: 151 VTYNSFIKGLCKCDRVDEARKFLARMP-VTPDVVSYTTVINGLCKSGDLDSASRMLDQMT 209

Query: 331 AKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTA 390
            +G  P VVTY+S++   CK G +  A  LL+ M +    P+ V  N+L+ A  ++G   
Sbjct: 210 NRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIG 269

Query: 391 SAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLV 450
            A  +   M   G   D  +Y A I G CKA+ +  AK +   M++ G +P+  SYS LV
Sbjct: 270 KAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLV 329

Query: 451 DGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
           +  C K   +  + L+++   +   VD+ +Y  L+   CK  + D A  LF+
Sbjct: 330 EELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFS 381



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 125/475 (26%), Positives = 218/475 (45%), Gaps = 44/475 (9%)

Query: 126 PDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVW 185
           PD    + + L+  Y+  K      +   +M  ++ +P +   T +++ L K   T    
Sbjct: 43  PD--DAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAV 100

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
           K+  +M   G   NI+ YNV++   C+   +D+ +K+L EM  +    D+ TYN+ I   
Sbjct: 101 KLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGL 160

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNH 303
           CK     EA     RM    ++PD+V+Y ++I+G C+ G +  A R+   +  +G TP+ 
Sbjct: 161 CKCDRVDEARKFLARMP---VTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDV 217

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
           VTY++LIDG+C+  ++E A+ L + M   G  P +V YNS+L  L + G I  A  +L E
Sbjct: 218 VTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVE 277

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
           M  +   PD V+ N  I+  CK      A  V +RM+E G   +  +Y  L+   CK KE
Sbjct: 278 MERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKE 337

Query: 424 MD-------IAKE------------LLFGMLDAG--------FS---------PSYCSYS 447
           +D        A+E            LL G+   G        FS         P    Y+
Sbjct: 338 LDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYN 397

Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGN 507
            ++D +C +   +  L++  + + R  C +V  +  L+   C  +++  A+ +   M   
Sbjct: 398 VMLDSHCKRRQIDKALQIHKQMLERN-CCNVVTWNILVHGLCVDDRLSDAETMLLTMVDE 456

Query: 508 GILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDN 562
           G + D V Y +L  A  + G+  A  ++ ++  +   +  +  Y +       +N
Sbjct: 457 GFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHEN 511



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 127/503 (25%), Positives = 214/503 (42%), Gaps = 73/503 (14%)

Query: 68  ESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALR-DFLSTPSVLNALVKIHDDP 126
           E AV  Y   + ++ + I  L K      A+  L ++ +  D +S  +V+N L K   D 
Sbjct: 140 EMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVTPDVVSYTTVINGLCK-SGDL 198

Query: 127 DGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWK 186
           D  S +L                    DQM      P +   + L++   K    +    
Sbjct: 199 DSASRML--------------------DQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMG 238

Query: 187 VYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYC 246
           +   M++LG   N+  YN L+ A  +   + K E +L EME +    D+ +YN  I   C
Sbjct: 239 LLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLC 298

Query: 247 KKGMHYEALAVQDRMEREGISP-----------------------------------DIV 271
           K     +A AV DRM   G +P                                   DI+
Sbjct: 299 KAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDIL 358

Query: 272 TYNSLIHGFCREGRMREARRLFR---DIKGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
            Y  L+ G C+ GR  EA  LF    D K   P+   Y  ++D +C+   +++AL++ + 
Sbjct: 359 LYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQ 418

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M  +     VVT+N ++  LC + R+ DA  +L  M ++   PD VT  TL++A CK G 
Sbjct: 419 MLERNCC-NVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGK 477

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKE--LLFGMLDAGFSPSYCSY 446
           +A+A+++    ++ G + D  TY ALI G       ++A+E  LLF  LD         +
Sbjct: 478 SAAALELFEEAVKGGCVPDVVTYSALITGLVHE---NMAEEAYLLFTKLDVAL------W 528

Query: 447 SWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVY-RALIRRFCKKEKVDYAQRLFNLMQ 505
           + ++ GY    + +  LKL  E +   +  +   + + +  +  K E +  A+ LF+   
Sbjct: 529 NAMILGYAENGSGDLGLKLFVELIESDVEPNARTFGKEISGKLVKAESLGKARGLFDRAV 588

Query: 506 GNGILGDSVIYTSLAYAYWRAGE 528
             G   D  +  +L   + + G+
Sbjct: 589 KGGFFPDLFVANTLIDVFAKCGD 611



 Score = 88.6 bits (218), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 66/234 (28%), Positives = 103/234 (44%), Gaps = 7/234 (2%)

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
           P +    V+L+S  K R  D   +++K+M++     N+  +N+L+H  C    +   E +
Sbjct: 391 PDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNC-CNVVTWNILVHGLCVDDRLSDAETM 449

Query: 223 LCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR 282
           L  M  +    D  TY TL+   CK G    AL + +   + G  PD+VTY++LI G   
Sbjct: 450 LLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVH 509

Query: 283 EGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYN 342
           E    EA  LF  +  A      +  +I GY      +  L+L   +    V P   T+ 
Sbjct: 510 ENMAEEAYLLFTKLDVAL-----WNAMILGYAENGSGDLGLKLFVELIESDVEPNARTFG 564

Query: 343 -SILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKV 395
             I  KL K   +  A  L +   +    PD    NTLI+ + K GD   A ++
Sbjct: 565 KEISGKLVKAESLGKARGLFDRAVKGGFFPDLFVANTLIDVFAKCGDLEEARRI 618



 Score = 47.8 bits (112), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 46/219 (21%), Positives = 94/219 (42%), Gaps = 33/219 (15%)

Query: 84  MIHILTKNKHFKSAQNML----EKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIF 139
           ++H L  +     A+ ML    ++  + DF++  ++++A+ K      G S         
Sbjct: 433 LVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKC-----GKSAA------- 480

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
                     L++F++      +P +   + L+  L  + + +  + ++ K+       +
Sbjct: 481 ---------ALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKL-------D 524

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHY-EALAVQ 258
           + L+N +I    ++   D   KL  E+   DV  +  T+   I+    K     +A  + 
Sbjct: 525 VALWNAMILGYAENGSGDLGLKLFVELIESDVEPNARTFGKEISGKLVKAESLGKARGLF 584

Query: 259 DRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK 297
           DR  + G  PD+   N+LI  F + G + EARR+F  +K
Sbjct: 585 DRAVKGGFFPDLFVANTLIDVFAKCGDLEEARRIFYSMK 623


>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g16640, mitochondrial; Flags: Precursor
 gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
 gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 504

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 121/378 (32%), Positives = 189/378 (50%), Gaps = 2/378 (0%)

Query: 191 MVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGM 250
           MVQ   + +I  ++ L+ A  K    D V  L  +M+   +  +L T N L+  +C+   
Sbjct: 72  MVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQ 131

Query: 251 HYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGAT--PNHVTYTT 308
              AL+   +M + G  P IVT+ SL++GFCR  R+ +A  +F  + G    PN V Y T
Sbjct: 132 LSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNT 191

Query: 309 LIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKK 368
           +IDG C++  ++ AL L   M   G+ P VVTYNS++  LC  GR  DA R+++ M +++
Sbjct: 192 IIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKRE 251

Query: 369 IAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAK 428
           I PD  T N LI+A  K G  + A +    M+   L  D  TY  LI+G C    +D A+
Sbjct: 252 IYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAE 311

Query: 429 ELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRF 488
           E+   M+  G  P   +YS L++GYC     E  +KL  E   RG+  +   Y  LI+ +
Sbjct: 312 EMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGY 371

Query: 489 CKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITL 548
           C+  K++ A+ +F  M   G+  + + Y  L +     G+ +    IL DM +  +   +
Sbjct: 372 CRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADI 431

Query: 549 KIYRSFSASYAKDNEILD 566
             Y        K  E+ D
Sbjct: 432 VTYNIIIRGMCKAGEVAD 449



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 110/380 (28%), Positives = 191/380 (50%), Gaps = 2/380 (0%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           + +++QM++  +  +L  C +LLN   +     +      KM++LG   +I  +  L++ 
Sbjct: 101 IYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNG 160

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
            C+   V     +  +M     + ++  YNT+I   CK      AL + +RME++GI PD
Sbjct: 161 FCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPD 220

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLRE 327
           +VTYNSLI G C  GR  +A R+   +  +   P+  T+  LID   +   + EA    E
Sbjct: 221 VVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYE 280

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
            M  + + P +VTY+ ++  LC   R+ +A  +   M  K   PD VT + LIN YCK  
Sbjct: 281 EMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSK 340

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
                MK+   M + G++ +  TY  LI G+C+A ++++A+E+   M+  G  P+  +Y+
Sbjct: 341 KVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYN 400

Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGN 507
            L+ G C+    E  L +L +    G+  D+  Y  +IR  CK  +V  A  ++  +   
Sbjct: 401 VLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQ 460

Query: 508 GILGDSVIYTSLAYAYWRAG 527
           G++ D   YT++    ++ G
Sbjct: 461 GLMPDIWTYTTMMLGLYKKG 480



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 108/390 (27%), Positives = 190/390 (48%), Gaps = 2/390 (0%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D L +F  M     +P +   + LL++++K +  D+V  ++++M  LG+  N+   N+L+
Sbjct: 64  DSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILL 123

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           +  C+ S +      L +M        + T+ +L+  +C+    Y+AL + D+M   G  
Sbjct: 124 NCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYK 183

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRL 325
           P++V YN++I G C+  ++  A  L   ++  G  P+ VTY +LI G C +    +A R+
Sbjct: 184 PNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRM 243

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
              M  + +YP V T+N+++    KEGR+ +A     EM  + + PD VT + LI   C 
Sbjct: 244 VSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCM 303

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
                 A ++   M+  G   D  TY  LI+G+CK+K+++   +L   M   G   +  +
Sbjct: 304 YSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVT 363

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+ L+ GYC         ++    V  G+  ++  Y  L+   C   K++ A  +   MQ
Sbjct: 364 YTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQ 423

Query: 506 GNGILGDSVIYTSLAYAYWRAGEPKACSDI 535
            NG+  D V Y  +     +AGE     DI
Sbjct: 424 KNGMDADIVTYNIIIRGMCKAGEVADAWDI 453



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 106/351 (30%), Positives = 174/351 (49%), Gaps = 4/351 (1%)

Query: 163 PHLHACTVLLNSLAK-DRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEK 221
           P +     LLN   + DR+ D ++ ++ +MV +G   N+ +YN +I   CKS  VD    
Sbjct: 149 PSIVTFGSLLNGFCRGDRVYDALY-MFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALD 207

Query: 222 LLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFC 281
           LL  ME   +  D+ TYN+LI+  C  G   +A  +   M +  I PD+ T+N+LI    
Sbjct: 208 LLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACV 267

Query: 282 REGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVV 339
           +EGR+ EA   + ++  +   P+ VTY+ LI G C  + L+EA  +   M +KG +P VV
Sbjct: 268 KEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVV 327

Query: 340 TYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRM 399
           TY+ ++   CK  ++    +L  EM+++ +  + VT   LI  YC+ G    A ++  RM
Sbjct: 328 TYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRM 387

Query: 400 LEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNE 459
           +  G+  +  TY  L+HG C   +++ A  +L  M   G      +Y+ ++ G C     
Sbjct: 388 VFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEV 447

Query: 460 EALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGIL 510
                +      +GL  D+  Y  ++    KK     A  LF  M+ +GIL
Sbjct: 448 ADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGIL 498



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 105/368 (28%), Positives = 161/368 (43%), Gaps = 39/368 (10%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           S L  ++K+  +P  +      L+  +       D L +FDQM      P++     +++
Sbjct: 137 SFLGKMIKLGHEP--SIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIID 194

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
            L K +  D    +  +M + G+  ++  YN LI   C S       +++  M  +++  
Sbjct: 195 GLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYP 254

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           D+FT+N LI    K+G   EA    + M R  + PDIVTY+ LI+G C   R+ EA  +F
Sbjct: 255 DVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMF 314

Query: 294 ---------RDI----------------------------KGATPNHVTYTTLIDGYCRA 316
                     D+                            +G   N VTYT LI GYCRA
Sbjct: 315 GFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRA 374

Query: 317 NDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTC 376
             L  A  +   M   GV+P ++TYN +L  LC  G+I  A  +L +M +  +  D VT 
Sbjct: 375 GKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTY 434

Query: 377 NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD 436
           N +I   CK G+ A A  +   +   GLM D +TY  ++ G  K      A  L   M +
Sbjct: 435 NIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKE 494

Query: 437 AGFSPSYC 444
            G  P+ C
Sbjct: 495 DGILPNEC 502



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 64/281 (22%), Positives = 121/281 (43%), Gaps = 4/281 (1%)

Query: 299 ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDAN 358
           A  N   Y  ++    R   L+++L L   M      P +  ++ +L  + K  +     
Sbjct: 42  AYSNGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVI 101

Query: 359 RLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGF 418
            L  +M    I  +  TCN L+N +C+    + A+    +M++ G      T+ +L++GF
Sbjct: 102 YLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGF 161

Query: 419 CKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDV 478
           C+   +  A  +   M+  G+ P+   Y+ ++DG C     +  L LL+     G+  DV
Sbjct: 162 CRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDV 221

Query: 479 SVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDD 538
             Y +LI   C   +   A R+ + M    I  D   + +L  A  + G      +  ++
Sbjct: 222 VTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEE 281

Query: 539 MYRRRL---MITLKIYRSFSASYAKDNEILDLFWSHVVDRG 576
           M RR L   ++T  +       Y++ +E  ++F   +V +G
Sbjct: 282 MIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMF-GFMVSKG 321



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 55/249 (22%), Positives = 111/249 (44%), Gaps = 2/249 (0%)

Query: 331 AKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTA 390
           ++  Y     Y  +LR   +  ++ D+  L   M + +  P     + L++A  K+    
Sbjct: 39  SRRAYSNGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYD 98

Query: 391 SAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLV 450
             + +  +M   G+  +  T   L++ FC+  ++ +A   L  M+  G  PS  ++  L+
Sbjct: 99  VVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLL 158

Query: 451 DGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGIL 510
           +G+C  +     L + D+ V  G   +V +Y  +I   CK ++VD A  L N M+ +GI 
Sbjct: 159 NGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIG 218

Query: 511 GDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDL--F 568
            D V Y SL      +G     + ++  M +R +   +  + +   +  K+  + +   F
Sbjct: 219 PDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEF 278

Query: 569 WSHVVDRGL 577
           +  ++ R L
Sbjct: 279 YEEMIRRSL 287


>gi|413922833|gb|AFW62765.1| hypothetical protein ZEAMMB73_408366 [Zea mays]
          Length = 820

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 122/393 (31%), Positives = 190/393 (48%), Gaps = 17/393 (4%)

Query: 171 LLNSLAKDRLTDMVWKVYKKMVQLGVVANIH-LYNVLIHACCKSSDVDKVEKLLCEMEFK 229
           LL   ++  LT ++ +++  M +    A     YN LI A C+ +D+   ++ L  M   
Sbjct: 99  LLTHFSRYALTPLMLRLFAHMYRHAPPAPTGATYNALIRALCRRADLRHAQRYLSLMVRS 158

Query: 230 DVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA 289
             R D FT+N+LI  YC+      A  +  +M   G S D V+Y +LI GFC  GR+ EA
Sbjct: 159 GWRPDAFTFNSLILGYCRTQQLEVAHDLFCKMPFRGFSQDAVSYAALIEGFCEAGRIDEA 218

Query: 290 RRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLC 349
             LFR++    P+  T+  L+ G C A   EE L + + M   G  P    Y +++   C
Sbjct: 219 LELFREM--TQPDMYTHAALVKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWC 276

Query: 350 KEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQF 409
           +E +  +A ++LNEM +  + P  VTC  ++NAYC+ G  + A++V   M   G   + +
Sbjct: 277 REQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVW 336

Query: 410 TYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEF 469
           TY A++ GFC A ++  A  LL  M + G  P   +Y+ L+ G C   +  +  +LL   
Sbjct: 337 TYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLM 396

Query: 470 VSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEP 529
              GL  D   Y  LI   CK  KVD A  LF+ ++  GI  +SV + ++     +AG+ 
Sbjct: 397 EGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKF 456

Query: 530 KACSDILDDMYRRRLMITLKIYRSFSASYAKDN 562
                 L++M               SA YA D 
Sbjct: 457 DVACTFLENM--------------ISAGYAPDT 475



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 117/444 (26%), Positives = 207/444 (46%), Gaps = 14/444 (3%)

Query: 116 LNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSL 175
           L+ +V+    PD  +   + L++ Y   +  +    +F +M          +   L+   
Sbjct: 152 LSLMVRSGWRPD--AFTFNSLILGYCRTQQLEVAHDLFCKMPFRGFSQDAVSYAALIEGF 209

Query: 176 AKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEME-FKDV--R 232
            +    D   +++++M Q     +++ +  L+   C   D  + E+ LC ++  K++  R
Sbjct: 210 CEAGRIDEALELFREMTQ----PDMYTHAALVKGLC---DAGRGEEGLCMLQKMKELGWR 262

Query: 233 ADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRL 292
                Y  L+ L+C++    EA  + + M   G+ P +VT   +++ +CREGRM  A R+
Sbjct: 263 PTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRV 322

Query: 293 FRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
           F  +  KG  PN  TY  ++ G+C A  + +A+ L + M   GV P VVTYN ++R  C 
Sbjct: 323 FESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCI 382

Query: 351 EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
           +G I  A RLL  M    +A D  T N LI+A CK G    A  + + +   G+  +  T
Sbjct: 383 DGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVT 442

Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFV 470
           +  +I+G CKA + D+A   L  M+ AG++P   +YS  ++  C     +  L  +DE +
Sbjct: 443 FNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEML 502

Query: 471 SRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPK 530
            + +      Y  +I R   +     A R++  M   G   D V YT+   AY   G   
Sbjct: 503 QKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLD 562

Query: 531 ACSDILDDMYRRRLMITLKIYRSF 554
              +++ +M + R ++    Y + 
Sbjct: 563 EAENVVTEMKKCRTIVDAMAYNTL 586



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 106/394 (26%), Positives = 183/394 (46%), Gaps = 6/394 (1%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           + L++F +M      P ++    L+  L      +    + +KM +LG       Y  L+
Sbjct: 217 EALELFREMT----QPDMYTHAALVKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAALV 272

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
              C+    ++ EK+L EM    +   + T   ++  YC++G    A+ V + M  +G  
Sbjct: 273 DLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCE 332

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRL 325
           P++ TYN+++ GFC  G++ +A  L   ++  G  P+ VTY  LI G C    +  A RL
Sbjct: 333 PNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRL 392

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
             +M   G+     TYN ++  LCK G++ +A  L + +  + I P++VT NT+IN  CK
Sbjct: 393 LRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCK 452

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            G    A      M+ AG   D +TY   I   CK K        +  ML     PS  +
Sbjct: 453 AGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVN 512

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+ +++   N+ N     ++  + VS+G   DV  Y   +R +C + ++D A+ +   M+
Sbjct: 513 YTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMK 572

Query: 506 GNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
               + D++ Y +L   +   G+      IL  M
Sbjct: 573 KCRTIVDAMAYNTLIDGHTSIGQTDRAVTILKHM 606



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 99/390 (25%), Positives = 175/390 (44%), Gaps = 4/390 (1%)

Query: 119 LVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKD 178
           L +    PD  +H  + LV    +    ++GL +  +M+     P   A   L++   ++
Sbjct: 221 LFREMTQPDMYTH--AALVKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCRE 278

Query: 179 RLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTY 238
           +  +   K+  +M   G++  +    ++++A C+   +    ++   M FK    +++TY
Sbjct: 279 QKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTY 338

Query: 239 NTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR--DI 296
           N ++  +C  G  Y+A+A+ D+M   G+ PD+VTYN LI G C +G +  A RL R  + 
Sbjct: 339 NAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEG 398

Query: 297 KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRD 356
            G   +  TY  LID  C+   ++EA  L + +  +G+ P  VT+N+++  LCK G+   
Sbjct: 399 NGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDV 458

Query: 357 ANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIH 416
           A   L  M     APD  T +  I   CK   +   +   + ML+  +      Y  +I+
Sbjct: 459 ACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVIN 518

Query: 417 GFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCV 476
                +   +A  +   M+  G SP   +Y+  V  YCN+   +    ++ E       V
Sbjct: 519 RLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIV 578

Query: 477 DVSVYRALIRRFCKKEKVDYAQRLFNLMQG 506
           D   Y  LI       + D A  +   M G
Sbjct: 579 DAMAYNTLIDGHTSIGQTDRAVTILKHMTG 608



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 101/454 (22%), Positives = 182/454 (40%), Gaps = 53/454 (11%)

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           +V  + N       + + DQMR   + P +    +L+     D      +++ + M   G
Sbjct: 341 IVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNG 400

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
           + A+ + YNVLI A CK+  VD+   L   +E++ +R +  T+NT+I   CK G    A 
Sbjct: 401 LAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVAC 460

Query: 256 AVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGY 313
              + M   G +PD  TY+  I   C+    +E      ++  K   P+ V YT +I+  
Sbjct: 461 TFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRL 520

Query: 314 CRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDN 373
               +   A R+   M ++G  P VVTY + +R  C EGR+ +A  ++ EM + +   D 
Sbjct: 521 FNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDA 580

Query: 374 VTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT----------------------- 410
           +  NTLI+ +  IG T  A+ +   M     M + FT                       
Sbjct: 581 MAYNTLIDGHTSIGQTDRAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEHVPLKATS 640

Query: 411 ----------------------------YKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
                                       Y +++ GF + + +D    L+  M +     +
Sbjct: 641 VWKTIELADVFELFELMKKNSVPSSARTYLSILEGFSEERRLDEVTSLVSLMKEENLPLN 700

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
              Y+ LV+ +C          LL   +  G   ++  Y+ L+     + + D A+ +F 
Sbjct: 701 EDIYNALVNCFCKLRMYSDAWALLCSMIGHGFLPNLIFYQYLLSGLTAEGQADRAKEIFR 760

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDIL 536
             +      D +++  +   + R G    C D++
Sbjct: 761 SSRWKEYNTDEIVWKVIIDGFIRKGHADMCHDMI 794



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 71/270 (26%), Positives = 121/270 (44%), Gaps = 7/270 (2%)

Query: 273 YNSLIHGFCREGRMREARRLFRDI---KGATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           + SL+  F R        RLF  +       P   TY  LI   CR  DL  A R   +M
Sbjct: 96  FRSLLTHFSRYALTPLMLRLFAHMYRHAPPAPTGATYNALIRALCRRADLRHAQRYLSLM 155

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
              G  P   T+NS++   C+  ++  A+ L  +M  +  + D V+   LI  +C+ G  
Sbjct: 156 VRSGWRPDAFTFNSLILGYCRTQQLEVAHDLFCKMPFRGFSQDAVSYAALIEGFCEAGRI 215

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
             A+++   M +     D +T+ AL+ G C A   +    +L  M + G+ P+  +Y+ L
Sbjct: 216 DEALELFREMTQP----DMYTHAALVKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAAL 271

Query: 450 VDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGI 509
           VD +C +   E   K+L+E    GL   V     ++  +C++ ++  A R+F  M+  G 
Sbjct: 272 VDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGC 331

Query: 510 LGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
             +   Y ++   +  AG+      +LD M
Sbjct: 332 EPNVWTYNAIVQGFCNAGKVYKAMALLDQM 361



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 75/392 (19%), Positives = 140/392 (35%), Gaps = 88/392 (22%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           +   +FD +    + P+      ++N L K    D+     + M+  G   + + Y+  I
Sbjct: 423 EACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFI 482

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
              CK+    +    + EM  KDV+     Y  +I     +  +  A  +  +M  +G S
Sbjct: 483 ENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCS 542

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDIKGATP--NHVTYTTLIDGYC----------- 314
           PD+VTY + +  +C EGR+ EA  +  ++K      + + Y TLIDG+            
Sbjct: 543 PDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTI 602

Query: 315 ----------------------------------------RANDLEEALRLREVMAAKGV 334
                                                   +  +L +   L E+M    V
Sbjct: 603 LKHMTGVASMPNHFTFFILLRHLLQRRLAEHVPLKATSVWKTIELADVFELFELMKKNSV 662

Query: 335 YPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMK 394
                TY SIL    +E R+ +   L++ M E+ +  +    N L+N +CK+   + A  
Sbjct: 663 PSSARTYLSILEGFSEERRLDEVTSLVSLMKEENLPLNEDIYNALVNCFCKLRMYSDAWA 722

Query: 395 VKNRMLEAGLM-----------------------------------LDQFTYKALIHGFC 419
           +   M+  G +                                    D+  +K +I GF 
Sbjct: 723 LLCSMIGHGFLPNLIFYQYLLSGLTAEGQADRAKEIFRSSRWKEYNTDEIVWKVIIDGFI 782

Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVD 451
           +    D+  +++  +      PS  +Y+ L +
Sbjct: 783 RKGHADMCHDMISMLEQMKCKPSDETYAMLTE 814


>gi|224136366|ref|XP_002326842.1| predicted protein [Populus trichocarpa]
 gi|222835157|gb|EEE73592.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 144/526 (27%), Positives = 231/526 (43%), Gaps = 50/526 (9%)

Query: 68  ESAVPNYKHSLQSHW-TMIHILTKNKHFKSAQNMLEKIALRDFLS----------TPSVL 116
           E+A   +K + Q     M+       H   AQN+  K   +D +S          +  V+
Sbjct: 8   ETAFGFFKFAFQDDSDEMVKSSCVAAHVLGAQNL--KFLAQDVVSWVIRRVGVDRSREVV 65

Query: 117 NALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLA 176
             + K H + + +  VL  L+  +  ++M  + L++  +MR   L P   A T+L   L 
Sbjct: 66  EFMWKRHAEFESDFSVLDTLMRGFLKVEMGCEALEIVGRMREVGLRPSSSAITILFKLLL 125

Query: 177 KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLF 236
           +      VWK+ + M+  G       +N +I   C+   V   E LLC M+    + D++
Sbjct: 126 RIGDHGSVWKLLRGMIHQGPRPCNRNFNAVILGFCRKGHVKVGESLLCVMQKFKCQPDVY 185

Query: 237 TYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI 296
            YN LI  YC +G  ++AL     M   G +P +VT+ ++I+ FC +G M EAR LF  +
Sbjct: 186 AYNILINAYCTRGQTFDALGWMRFMIDNGCTPSLVTFGTVINAFCNQGNMMEARNLFDGM 245

Query: 297 K--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVT-------------- 340
           K  G  PN V Y TL++GY +A D+ +A  L E M +K V P   T              
Sbjct: 246 KEAGHIPNVVCYNTLMNGYVKARDIGQANMLYEEMKSKAVAPDCTTFNILVAGHYRYGRE 305

Query: 341 ---------------------YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTL 379
                                YN  +  LC  G + +A + L +M EK I P  V  N++
Sbjct: 306 EDRDRLLRDLSQSGSLSISSLYNICVSGLCWAGWLDEAMKFLEDMLEKGITPTVVAFNSI 365

Query: 380 INAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGF 439
           I AY + G    A K    M++ GL     T  +LI G  K   +  A++LL+ M+  G 
Sbjct: 366 IAAYSRAGLEEKAYKAYRMMVKFGLFPSSLTCSSLIMGLSKLWRLQEARDLLYEMIVEGL 425

Query: 440 SPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQR 499
             +  +++ L+DGY    +      L +E   RG+  D   + A I        VD A  
Sbjct: 426 PINKAAFTLLLDGYFRMGDVAGAYSLWNEMEGRGIHPDAVAFSAFINGLSIVGLVDEAYD 485

Query: 500 LFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
           +F  M   G + ++ +Y SL   +  +G  +    +  +M R+ L+
Sbjct: 486 VFLQMSKKGFMPNNFVYNSLIRGFCNSGRLQEALMLEREMARKGLL 531



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 103/346 (29%), Positives = 175/346 (50%), Gaps = 3/346 (0%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           + ++  + M    + P + A   ++ + ++  L +  +K Y+ MV+ G+  +    + LI
Sbjct: 342 EAMKFLEDMLEKGITPTVVAFNSIIAAYSRAGLEEKAYKAYRMMVKFGLFPSSLTCSSLI 401

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
               K   + +   LL EM  + +  +   +  L+  Y + G    A ++ + ME  GI 
Sbjct: 402 MGLSKLWRLQEARDLLYEMIVEGLPINKAAFTLLLDGYFRMGDVAGAYSLWNEMEGRGIH 461

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
           PD V +++ I+G    G + EA  +F  +  KG  PN+  Y +LI G+C +  L+EAL L
Sbjct: 462 PDAVAFSAFINGLSIVGLVDEAYDVFLQMSKKGFMPNNFVYNSLIRGFCNSGRLQEALML 521

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
              MA KG+ P + T N I+  LCKEGR++ A+ +   M+   + PD VT NTLI+ YCK
Sbjct: 522 EREMARKGLLPDIFTTNIIINGLCKEGRMKSASDVFRNMHHTGLIPDIVTYNTLIDGYCK 581

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
             DT S  +V N+M   G   D  TY   +HG C  ++M  A  +L  ++ AG  P   +
Sbjct: 582 AFDTVSTDEVVNKMYATGWDPDITTYNIRLHGLCTGRKMSRAVMMLEELISAGVVPDTVT 641

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
           Y+ +++G C    E A++ +  + +      +V     L+  FCK+
Sbjct: 642 YNTVMNGVCTDVLERAMI-VTAKLLKMAFVPNVVTANLLLSHFCKQ 686



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 98/382 (25%), Positives = 185/382 (48%), Gaps = 17/382 (4%)

Query: 203 YNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRME 262
           YN+ +   C +  +D+  K L +M  K +   +  +N++IA Y + G+  +A      M 
Sbjct: 327 YNICVSGLCWAGWLDEAMKFLEDMLEKGITPTVVAFNSIIAAYSRAGLEEKAYKAYRMMV 386

Query: 263 REGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLE 320
           + G+ P  +T +SLI G  +  R++EAR L  +  ++G   N   +T L+DGY R  D+ 
Sbjct: 387 KFGLFPSSLTCSSLIMGLSKLWRLQEARDLLYEMIVEGLPINKAAFTLLLDGYFRMGDVA 446

Query: 321 EALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLI 380
            A  L   M  +G++P  V +++ +  L   G + +A  +  +M++K   P+N   N+LI
Sbjct: 447 GAYSLWNEMEGRGIHPDAVAFSAFINGLSIVGLVDEAYDVFLQMSKKGFMPNNFVYNSLI 506

Query: 381 NAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFS 440
             +C  G    A+ ++  M   GL+ D FT   +I+G CK   M  A ++   M   G  
Sbjct: 507 RGFCNSGRLQEALMLEREMARKGLLPDIFTTNIIINGLCKEGRMKSASDVFRNMHHTGLI 566

Query: 441 PSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRL 500
           P   +Y+ L+DGYC   +  +  +++++  + G   D++ Y   +   C   K+  A  +
Sbjct: 567 PDIVTYNTLIDGYCKAFDTVSTDEVVNKMYATGWDPDITTYNIRLHGLCTGRKMSRAVMM 626

Query: 501 FNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAK 560
              +   G++ D+V Y ++            C+D+L+    R +++T K+ +    ++  
Sbjct: 627 LEELISAGVVPDTVTYNTVMNG--------VCTDVLE----RAMIVTAKLLK---MAFVP 671

Query: 561 DNEILDLFWSHVVDRGLMSKHI 582
           +    +L  SH   +G+  K I
Sbjct: 672 NVVTANLLLSHFCKQGMPEKTI 693



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 113/433 (26%), Positives = 198/433 (45%), Gaps = 12/433 (2%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           S+L  + K    PD   +  + L+  Y     T D L     M  +   P L     ++N
Sbjct: 170 SLLCVMQKFKCQPD--VYAYNILINAYCTRGQTFDALGWMRFMIDNGCTPSLVTFGTVIN 227

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
           +            ++  M + G + N+  YN L++   K+ D+ +   L  EM+ K V  
Sbjct: 228 AFCNQGNMMEARNLFDGMKEAGHIPNVVCYNTLMNGYVKARDIGQANMLYEEMKSKAVAP 287

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVT----YNSLIHGFCREGRMREA 289
           D  T+N L+A + + G   +    +DR+ R+      ++    YN  + G C  G + EA
Sbjct: 288 DCTTFNILVAGHYRYGREED----RDRLLRDLSQSGSLSISSLYNICVSGLCWAGWLDEA 343

Query: 290 RRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRK 347
            +   D+  KG TP  V + ++I  Y RA   E+A +   +M   G++P  +T +S++  
Sbjct: 344 MKFLEDMLEKGITPTVVAFNSIIAAYSRAGLEEKAYKAYRMMVKFGLFPSSLTCSSLIMG 403

Query: 348 LCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLD 407
           L K  R+++A  LL EM  + +  +      L++ Y ++GD A A  + N M   G+  D
Sbjct: 404 LSKLWRLQEARDLLYEMIVEGLPINKAAFTLLLDGYFRMGDVAGAYSLWNEMEGRGIHPD 463

Query: 408 QFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLD 467
              + A I+G      +D A ++   M   GF P+   Y+ L+ G+CN    +  L L  
Sbjct: 464 AVAFSAFINGLSIVGLVDEAYDVFLQMSKKGFMPNNFVYNSLIRGFCNSGRLQEALMLER 523

Query: 468 EFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
           E   +GL  D+     +I   CK+ ++  A  +F  M   G++ D V Y +L   Y +A 
Sbjct: 524 EMARKGLLPDIFTTNIIINGLCKEGRMKSASDVFRNMHHTGLIPDIVTYNTLIDGYCKAF 583

Query: 528 EPKACSDILDDMY 540
           +  +  ++++ MY
Sbjct: 584 DTVSTDEVVNKMY 596



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 87/322 (27%), Positives = 142/322 (44%), Gaps = 36/322 (11%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           +S   S L++  + L   Q+   +  +M V  L  +  A T+LL+   +       + ++
Sbjct: 393 SSLTCSSLIMGLSKLWRLQEARDLLYEMIVEGLPINKAAFTLLLDGYFRMGDVAGAYSLW 452

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
            +M   G+  +   ++  I+       VD+   +  +M  K    + F YN+LI  +C  
Sbjct: 453 NEMEGRGIHPDAVAFSAFINGLSIVGLVDEAYDVFLQMSKKGFMPNNFVYNSLIRGFCNS 512

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTY 306
           G   EAL ++  M R+G+ PDI T N +I+G C+EGRM+ A  +FR++   G  P+ VTY
Sbjct: 513 GRLQEALMLEREMARKGLLPDIFTTNIIINGLCKEGRMKSASDVFRNMHHTGLIPDIVTY 572

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
            TLIDGYC+A D      +   M A G  P + TYN  L  LC   ++  A  +L E+  
Sbjct: 573 NTLIDGYCKAFDTVSTDEVVNKMYATGWDPDITTYNIRLHGLCTGRKMSRAVMMLEELIS 632

Query: 367 KKIAPDNVTCNT----------------------------------LINAYCKIGDTASA 392
             + PD VT NT                                  L++ +CK G     
Sbjct: 633 AGVVPDTVTYNTVMNGVCTDVLERAMIVTAKLLKMAFVPNVVTANLLLSHFCKQGMPEKT 692

Query: 393 MKVKNRMLEAGLMLDQFTYKAL 414
           +    ++ E     D+ + K +
Sbjct: 693 IMWGQKLNEISFGFDEISIKLM 714



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 79/344 (22%), Positives = 143/344 (41%), Gaps = 10/344 (2%)

Query: 241 LIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKG-- 298
           L  L  + G H     +   M  +G  P    +N++I GFCR+G ++    L   ++   
Sbjct: 120 LFKLLLRIGDHGSVWKLLRGMIHQGPRPCNRNFNAVILGFCRKGHVKVGESLLCVMQKFK 179

Query: 299 ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDAN 358
             P+   Y  LI+ YC      +AL     M   G  P +VT+ +++   C +G + +A 
Sbjct: 180 CQPDVYAYNILINAYCTRGQTFDALGWMRFMIDNGCTPSLVTFGTVINAFCNQGNMMEAR 239

Query: 359 RLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGF 418
            L + M E    P+ V  NTL+N Y K  D   A  +   M    +  D  T+  L+ G 
Sbjct: 240 NLFDGMKEAGHIPNVVCYNTLMNGYVKARDIGQANMLYEEMKSKAVAPDCTTFNILVAGH 299

Query: 419 CKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDV 478
            +    +    LL  +  +G       Y+  V G C     +  +K L++ + +G+   V
Sbjct: 300 YRYGREEDRDRLLRDLSQSGSLSISSLYNICVSGLCWAGWLDEAMKFLEDMLEKGITPTV 359

Query: 479 SVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYA---YWRAGEPKACSDI 535
             + ++I  + +    + A + + +M   G+   S+  +SL       WR  E +   D+
Sbjct: 360 VAFNSIIAAYSRAGLEEKAYKAYRMMVKFGLFPSSLTCSSLIMGLSKLWRLQEAR---DL 416

Query: 536 LDDMYRRRLMITLKIYRSFSASYAKDNEILDLF--WSHVVDRGL 577
           L +M    L I    +      Y +  ++   +  W+ +  RG+
Sbjct: 417 LYEMIVEGLPINKAAFTLLLDGYFRMGDVAGAYSLWNEMEGRGI 460



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 79/305 (25%), Positives = 128/305 (41%), Gaps = 24/305 (7%)

Query: 269 DIVTYNSLIHGFCRE----------GRMREARRLFRDIKGATPNHVTYTTLIDGYCRAND 318
           D    ++L+ GF +           GRMRE         G  P+    T L     R  D
Sbjct: 78  DFSVLDTLMRGFLKVEMGCEALEIVGRMREV--------GLRPSSSAITILFKLLLRIGD 129

Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT 378
                +L   M  +G  P    +N+++   C++G ++    LL  M + K  PD    N 
Sbjct: 130 HGSVWKLLRGMIHQGPRPCNRNFNAVILGFCRKGHVKVGESLLCVMQKFKCQPDVYAYNI 189

Query: 379 LINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAG 438
           LINAYC  G T  A+     M++ G      T+  +I+ FC    M  A+ L  GM +AG
Sbjct: 190 LINAYCTRGQTFDALGWMRFMIDNGCTPSLVTFGTVINAFCNQGNMMEARNLFDGMKEAG 249

Query: 439 FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR---RFCKKEKVD 495
             P+   Y+ L++GY    +      L +E  S+ +  D + +  L+    R+ ++E  D
Sbjct: 250 HIPNVVCYNTLMNGYVKARDIGQANMLYEEMKSKAVAPDCTTFNILVAGHYRYGREEDRD 309

Query: 496 YAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFS 555
              RL   +  +G L  S +Y         AG        L+DM  + +  T+  + S  
Sbjct: 310 ---RLLRDLSQSGSLSISSLYNICVSGLCWAGWLDEAMKFLEDMLEKGITPTVVAFNSII 366

Query: 556 ASYAK 560
           A+Y++
Sbjct: 367 AAYSR 371


>gi|147841407|emb|CAN66681.1| hypothetical protein VITISV_005087 [Vitis vinifera]
          Length = 882

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 113/365 (30%), Positives = 193/365 (52%), Gaps = 18/365 (4%)

Query: 230 DVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA 289
           ++R  +  +N LI  YC+ G    A+ + + M+ EG +PDIVTYN+L++GFC+ G +  A
Sbjct: 12  EIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTA 71

Query: 290 RRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRK 347
           ++L  +I      PN +TYTTLID YC++  LE+AL + + M  K + P VVTY  I+  
Sbjct: 72  KKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNG 131

Query: 348 LCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLD 407
           LCK G++ +A  +  EM E  + P+  +  TLI++  K G+ A A  ++ RM+  G+  D
Sbjct: 132 LCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFD 191

Query: 408 QFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLD 467
              Y AL+ G  KA   + A+++   +L+    P+  +YS L+DG+C   +      LL 
Sbjct: 192 VVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQ 251

Query: 468 EFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
           E   + +  +V VY +++  + KK  ++ A  +   M    IL +  +Y +L   Y++A 
Sbjct: 252 EMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKAD 311

Query: 528 EPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSK--HIFKE 585
           +     D+  +M  R L               ++N ++D F +++   G M +   +FK+
Sbjct: 312 QRGIALDLFKEMKSRGL--------------EENNFVIDSFVNNLKRSGRMEEADELFKD 357

Query: 586 MQLRN 590
           M  R 
Sbjct: 358 MMSRG 362



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 104/375 (27%), Positives = 190/375 (50%), Gaps = 2/375 (0%)

Query: 170 VLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFK 229
           VL++   ++       ++ + M   G   +I  YN L++  CK  D+   +KL+ E+   
Sbjct: 22  VLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISLV 81

Query: 230 DVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA 289
           ++  ++ TY TLI  YCK     +AL + D M  + + PD+VTY  +++G C+ G++ EA
Sbjct: 82  NLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEA 141

Query: 290 RRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRK 347
           + +FR+++  G  PN  +Y TLID   +  ++ EA  L+  M  +G+   VV Y +++  
Sbjct: 142 KSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDG 201

Query: 348 LCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLD 407
           L K G   +A  +   + E+ + P+ VT + LI+ +CK+GD      +   M E  +  +
Sbjct: 202 LFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPN 261

Query: 408 QFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLD 467
              Y +++ G+ K   ++ A +++  M+     P+   Y  L+DGY   +     L L  
Sbjct: 262 VIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFK 321

Query: 468 EFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
           E  SRGL  +  V  + +    +  +++ A  LF  M   G+L D V YTS+   +++AG
Sbjct: 322 EMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAG 381

Query: 528 EPKACSDILDDMYRR 542
           +     +I  +M  +
Sbjct: 382 KESDAFNIAQEMTEK 396



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 117/474 (24%), Positives = 216/474 (45%), Gaps = 28/474 (5%)

Query: 72  PNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALR----DFLSTPSVLNALVKIHDDPD 127
           P  + S++    +I    +N     A  +LE +       D ++  +++N   KI D   
Sbjct: 11  PEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGD--- 67

Query: 128 GNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKV 187
                     +F A         ++  ++ + NL P++   T L+++  K +  +    +
Sbjct: 68  ----------LFTAK--------KLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYM 109

Query: 188 YKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCK 247
           Y +M    +V ++  Y  +++  CKS  V++ + +  EME   V  + F+Y TLI    K
Sbjct: 110 YDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFK 169

Query: 248 KGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVT 305
           +G   EA  +Q RM   GI  D+V Y +L+ G  + G    A  +F+ +  +   PN VT
Sbjct: 170 EGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVT 229

Query: 306 YTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMN 365
           Y+ LIDG+C+  D+ +   L + M  K ++P V+ Y+SI+    K+G + +A  ++ +M 
Sbjct: 230 YSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMV 289

Query: 366 EKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMD 425
           ++ I P+     TLI+ Y K      A+ +   M   GL  + F   + ++   ++  M+
Sbjct: 290 QRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRME 349

Query: 426 IAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
            A EL   M+  G  P   +Y+ ++DG+     E     +  E   +    DV  Y  LI
Sbjct: 350 EADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLI 409

Query: 486 RRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
               K  K + ++     M+  G+  DS  + ++  AY + G       +L++M
Sbjct: 410 NGLFKLGKYE-SESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEM 462



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 104/392 (26%), Positives = 177/392 (45%), Gaps = 6/392 (1%)

Query: 139 FYANLKMT---QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           F  NLK +   ++  ++F  M    L+P     T +++   K       + + ++M +  
Sbjct: 338 FVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKS 397

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
              ++  YNVLI+   K    +  E     M    +  D  T+NT+I  YCK+G    AL
Sbjct: 398 SGFDVVAYNVLINGLFKLGKYES-ESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNAL 456

Query: 256 AVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGY 313
            + + M+  G+ P+ +T N L+   C  G + +   L  D  + G  P   T+  ++D  
Sbjct: 457 KLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDAS 516

Query: 314 CRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDN 373
            ++   +  L   + +   GV   + TYN+++   C+ G IR A  +  +M  K I  D 
Sbjct: 517 SKSRRADVILHXHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADI 576

Query: 374 VTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFG 433
           +T N LI+ YC       A  V ++ML  G+  +  TY  L+ G   A+ +  A  L+  
Sbjct: 577 ITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQ 636

Query: 434 MLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEK 493
           M + G  P+  +Y  LV G+    N +  +KL  E +++G       Y  LI  F K +K
Sbjct: 637 MKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKK 696

Query: 494 VDYAQRLFNLMQGNGILGDSVIYTSLAYAYWR 525
           +  A+ L   MQ  GI  +S  Y  L   +++
Sbjct: 697 MSQAKELMQEMQVRGIPPNSSTYDILICGWYK 728



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 101/464 (21%), Positives = 206/464 (44%), Gaps = 15/464 (3%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N  V S +V  Y    +  + + V  +M   N++P++     L++   K     +   ++
Sbjct: 261 NVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLF 320

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
           K+M   G+  N  + +  ++   +S  +++ ++L  +M  + +  D   Y +++  + K 
Sbjct: 321 KEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKA 380

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTY 306
           G   +A  +   M  +    D+V YN LI+G  + G+  E+      ++  G  P+  T+
Sbjct: 381 GKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKY-ESESFHTGMRQLGLAPDSATF 439

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
            T+I+ YC+  +L  AL+L   M + G+ P  +T N ++++LC  G I     LLN+M  
Sbjct: 440 NTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLV 499

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
               P   T   +++A  K       +   ++++  G+ LD  TY  LI  FC+   +  
Sbjct: 500 MGFHPTPTTHKAVLDASSKSRRADVILHXHDQLVGMGVKLDLSTYNTLISTFCRLGMIRR 559

Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
           A  +   M+  G      +Y+ L+ GYC  ++ +    +  + ++ G+  +V  Y  L+ 
Sbjct: 560 ATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLG 619

Query: 487 RFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMI 546
                  +  A  L N M+  G++ ++  Y  L   + + G  K C  +  +M  +  + 
Sbjct: 620 GLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVP 679

Query: 547 TLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKEMQLRN 590
             + Y    + +AK  ++              +K + +EMQ+R 
Sbjct: 680 KTRTYNVLISCFAKGKKMSQ------------AKELMQEMQVRG 711



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 129/270 (47%), Gaps = 4/270 (1%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           + + + M V    P       +L++ +K R  D++   + ++V +GV  ++  YN LI  
Sbjct: 491 MDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHXHDQLVGMGVKLDLSTYNTLIST 550

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
            C+   + +   +  +M  K + AD+ TYN LI  YC      +A AV  +M  EG+SP+
Sbjct: 551 FCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPN 610

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLRE 327
           + TYN L+ G      ++EA  L   +K  G  PN  TY  L+ G+ +  +++E ++L  
Sbjct: 611 VETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYC 670

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
            M  KG  P   TYN ++    K  ++  A  L+ EM  + I P++ T + LI  + K+ 
Sbjct: 671 EMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLS 730

Query: 388 DTASAMKVKNR--MLEAGLMLDQFTYKALI 415
                 K   R    EA  + ++   K  I
Sbjct: 731 KQPELNKSLKRSYQAEAKRLFEEMNEKGFI 760



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 64/247 (25%), Positives = 111/247 (44%), Gaps = 14/247 (5%)

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           L+  +  L M +    VF  M    ++  +     L++           + V+ +M+  G
Sbjct: 547 LISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEG 606

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
           V  N+  YN+L+     +  + +   L+ +M+ + +  +  TY+ L++ + K G   E +
Sbjct: 607 VSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECV 666

Query: 256 AVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGY 313
            +   M  +G  P   TYN LI  F +  +M +A+ L ++  ++G  PN  TY  LI G+
Sbjct: 667 KLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGW 726

Query: 314 CRANDLEE------------ALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLL 361
            + +   E            A RL E M  KG  P   T   I   L K G+  DA R+L
Sbjct: 727 YKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIPCENTLACISFTLAKPGKKADAQRIL 786

Query: 362 NEMNEKK 368
           N++ +KK
Sbjct: 787 NKLYKKK 793


>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 124/468 (26%), Positives = 232/468 (49%), Gaps = 28/468 (5%)

Query: 50  LYNC-CHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALR- 107
           L NC CH+  ++  F   A+     Y+    +  T+I  L        A +  +K+  + 
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQG 159

Query: 108 ---DFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPH 164
              D +S  +++N + KI D                     T+  +++  ++      P+
Sbjct: 160 IKFDQVSYGTLINGVCKIGD---------------------TRGAIKLVRKIDGRLTKPN 198

Query: 165 LHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLC 224
           +     ++++L K +L    + ++ +M   G+ A++  Y  LI+  C +S + +   LL 
Sbjct: 199 VEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLN 258

Query: 225 EMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREG 284
           EM  K +  +++TYN L+   CK+G   EA  V   M +  + PD++TY++L+ G+    
Sbjct: 259 EMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVY 318

Query: 285 RMREARRLFR--DIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYN 342
            +++A+ +F    + G TP+  +YT LI+G+C+   ++EAL L + M  K + PG+VTY+
Sbjct: 319 ELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYS 378

Query: 343 SILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEA 402
           S++  LCK GRI     L++EM ++ I  + +T N+LI+  CK G    A+ + N+M + 
Sbjct: 379 SLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQ 438

Query: 403 GLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEAL 462
           G+    FT+  L+ G CK   +  A+E    +L  G+      Y+ +++G+C +   E  
Sbjct: 439 GIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEA 498

Query: 463 LKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGIL 510
           L +L +    G   +   +  +I    KK++ D A++L   M   G+L
Sbjct: 499 LTMLSKMEENGCVPNAVTFDIIINALFKKDENDKAEKLLRQMICRGLL 546



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 119/405 (29%), Positives = 195/405 (48%), Gaps = 2/405 (0%)

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
           +A +K     + +  ++ +  + P L    +L+N           + V  K+++ G   +
Sbjct: 69  FAKIKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYQPH 128

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
              +  LI   C    V+K      ++  + ++ D  +Y TLI   CK G    A+ +  
Sbjct: 129 TITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVR 188

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRAN 317
           +++     P++  YN++I   C+   + EA  LF ++  KG + + VTYTTLI G+C A+
Sbjct: 189 KIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIAS 248

Query: 318 DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCN 377
            L+EA+ L   M  K + P V TYN ++  LCKEG++++A  +L  M +  + PD +T +
Sbjct: 249 KLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYS 308

Query: 378 TLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA 437
           TL++ Y  + +   A  V N M   G+  D  +Y  LI+GFCK K +D A  L   M   
Sbjct: 309 TLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQK 368

Query: 438 GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYA 497
              P   +YS L+DG C       +  L+DE   RG+  +V  Y +LI   CK   +D A
Sbjct: 369 NMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRA 428

Query: 498 QRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRR 542
             LFN M+  GI   S  +T L     + G  K   +   D+  +
Sbjct: 429 IALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTK 473



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 110/377 (29%), Positives = 192/377 (50%), Gaps = 2/377 (0%)

Query: 171 LLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKD 230
           L+N + K   T    K+ +K+       N+ +YN +I A CK   V +   L  EM  K 
Sbjct: 170 LINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKG 229

Query: 231 VRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREAR 290
           + AD+ TY TLI  +C      EA+ + + M  + I+P++ TYN L+   C+EG+++EA+
Sbjct: 230 ISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAK 289

Query: 291 RLFRDIKGA--TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
            +   +  A   P+ +TY+TL+DGY    +L++A  +   M+  GV P V +Y  ++   
Sbjct: 290 NVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGF 349

Query: 349 CKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ 408
           CK   + +A  L  EM++K + P  VT ++LI+  CK G  +    + + M + G+  + 
Sbjct: 350 CKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANV 409

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
            TY +LI G CK   +D A  L   M D G  P   +++ L+DG C     +   +   +
Sbjct: 410 ITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQD 469

Query: 469 FVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
            +++G  +DV  Y  +I   CK+  ++ A  + + M+ NG + ++V +  +  A ++  E
Sbjct: 470 LLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEENGCVPNAVTFDIIINALFKKDE 529

Query: 529 PKACSDILDDMYRRRLM 545
                 +L  M  R L+
Sbjct: 530 NDKAEKLLRQMICRGLL 546



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 102/342 (29%), Positives = 162/342 (47%), Gaps = 4/342 (1%)

Query: 226 MEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGR 285
           +E K ++ DL T N LI  +C  G      +V  ++ + G  P  +T+ +LI G C +G+
Sbjct: 85  LELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQ 144

Query: 286 MREARRLFRD---IKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYN 342
           + +A   F D    +G   + V+Y TLI+G C+  D   A++L   +  +   P V  YN
Sbjct: 145 VNKALH-FHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYN 203

Query: 343 SILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEA 402
           +I+  LCK   + +A  L +EM  K I+ D VT  TLI  +C       A+ + N M+  
Sbjct: 204 TIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLK 263

Query: 403 GLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEAL 462
            +  + +TY  L+   CK  ++  AK +L  ML A   P   +YS L+DGY      +  
Sbjct: 264 TINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKA 323

Query: 463 LKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYA 522
             + +     G+  DV  Y  LI  FCK + VD A  LF  M    ++   V Y+SL   
Sbjct: 324 QHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDG 383

Query: 523 YWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
             ++G      D++D+M  R +   +  Y S      K+  +
Sbjct: 384 LCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHL 425



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 101/229 (44%)

Query: 336 PGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKV 395
           P ++ +N IL    K      A  L + +  K I PD +T N LIN +C +G       V
Sbjct: 57  PPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSV 116

Query: 396 KNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCN 455
             ++L+ G      T+  LI G C   +++ A      +L  G      SY  L++G C 
Sbjct: 117 LAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCK 176

Query: 456 KNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVI 515
             +    +KL+ +   R    +V +Y  +I   CK + V  A  LF+ M   GI  D V 
Sbjct: 177 IGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVT 236

Query: 516 YTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
           YT+L Y +  A + K    +L++M  + +   +  Y     +  K+ ++
Sbjct: 237 YTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKV 285



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 61/242 (25%), Positives = 106/242 (43%)

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
           TP  + +  ++D + +      A+ L   +  KG+ P ++T N ++   C  G+I     
Sbjct: 56  TPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFS 115

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
           +L ++ ++   P  +T  TLI   C  G    A+   +++L  G+  DQ +Y  LI+G C
Sbjct: 116 VLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVC 175

Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
           K  +   A +L+  +      P+   Y+ ++D  C          L  E  ++G+  DV 
Sbjct: 176 KIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVV 235

Query: 480 VYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
            Y  LI  FC   K+  A  L N M    I  +   Y  L  A  + G+ K   ++L  M
Sbjct: 236 TYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVM 295

Query: 540 YR 541
            +
Sbjct: 296 LK 297


>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
 gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
          Length = 948

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 124/429 (28%), Positives = 200/429 (46%), Gaps = 5/429 (1%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           VF  M    + P ++   V++ +       D    + + M + G V N  +Y +LIHA  
Sbjct: 187 VFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALS 246

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           +++ V++  KLL EM       D+ T+N +I   CK G  +EA  + DRM     + D +
Sbjct: 247 ENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADAL 306

Query: 272 TYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRL-REVMA 330
               L+HG CR G++ EAR +   I    PN V Y TLI+GY  +   EEA  L  + M 
Sbjct: 307 IQGYLMHGLCRMGKVDEARAMLSKI--PNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMV 364

Query: 331 AKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTA 390
             G  P   T+N ++  LCK+G +  A   L+EM +K   P+ +T   LI+ +CK G   
Sbjct: 365 IAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFE 424

Query: 391 SAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLV 450
            A KV N M   GL L+   Y  LI   CK  ++  A ++   M   G  P   +++ L+
Sbjct: 425 EASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLI 484

Query: 451 DGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGIL 510
            G C  +  E  L L  + +  G+  +   Y  LI  F + E +  A +L   M+  G  
Sbjct: 485 YGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCP 544

Query: 511 GDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDL--F 568
            D++ Y  L  A  + G  + C  +++ M+   +  ++        S+ +  ++ D   F
Sbjct: 545 LDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQF 604

Query: 569 WSHVVDRGL 577
              ++ RGL
Sbjct: 605 LRDMIQRGL 613



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 127/449 (28%), Positives = 205/449 (45%), Gaps = 24/449 (5%)

Query: 78  LQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTP--------------SVLNALVKIH 123
           +Q+   +IH L K      A  + +++ LRDF +                 V  A   + 
Sbjct: 270 VQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLS 329

Query: 124 DDPDGNSHVLSWLVIFY---ANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRL 180
             P+ N+ + + L+  Y      +  +D L  +  M +    P      ++++ L K   
Sbjct: 330 KIPNPNTVLYNTLINGYVVSGRFEEAKDLL--YKNMVIAGFEPDAFTFNIMIDGLCKKGY 387

Query: 181 TDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNT 240
                +   +MV+ G   N+  Y +LI   CK    ++  K++  M  K +  +   YN 
Sbjct: 388 LVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNC 447

Query: 241 LIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKG 298
           LI   CK G   +AL +   M  +G  PDI T+NSLI+G C+  +M EA  L+RD  ++G
Sbjct: 448 LIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEG 507

Query: 299 ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDAN 358
              N VTY TLI  + R   +++A +L   M  +G     +TYN +++ LCK G      
Sbjct: 508 VIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCL 567

Query: 359 RLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGF 418
            L+ +M  ++I P   +CN LIN++C+ G    A++    M++ GL  D  TY +LI+G 
Sbjct: 568 GLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGL 627

Query: 419 CKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDV 478
           CK      A  L  G+   G  P   +Y+ L+  YC +       +LL + VS G   + 
Sbjct: 628 CKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNE 687

Query: 479 SVYRALIRRFCKKEKVDYAQRLFNLMQGN 507
             +  LI  F K    D  Q  F ++ GN
Sbjct: 688 ITWSILINYFVKNNS-DSEQ--FTILMGN 713



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 108/333 (32%), Positives = 165/333 (49%), Gaps = 3/333 (0%)

Query: 198 ANIHLYNVLIHACCKSSDVDKVEKLLCE-MEFKDVRADLFTYNTLIALYCKKGMHYEALA 256
            N  LYN LI+    S   ++ + LL + M       D FT+N +I   CKKG    AL 
Sbjct: 334 PNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALE 393

Query: 257 VQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYC 314
             D M ++G  P+++TY  LI GFC++G   EA ++   +  KG + N V Y  LI   C
Sbjct: 394 FLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALC 453

Query: 315 RANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNV 374
           +   +++AL++   M++KG  P + T+NS++  LCK  ++ +A  L  +M  + +  + V
Sbjct: 454 KDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTV 513

Query: 375 TCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGM 434
           T NTLI+A+ ++     A K+   M   G  LD  TY  LI   CK    +    L+  M
Sbjct: 514 TYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQM 573

Query: 435 LDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKV 494
                 PS  S + L++ +C        L+ L + + RGL  D+  Y +LI   CK  + 
Sbjct: 574 FGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRF 633

Query: 495 DYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
             A  LFN +Q  GI  D+V Y +L   Y   G
Sbjct: 634 QEALNLFNGLQAKGIHPDAVTYNTLISRYCYEG 666



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 104/358 (29%), Positives = 180/358 (50%), Gaps = 7/358 (1%)

Query: 169 TVLLNSL-----AKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLL 223
           TVL N+L        R  +    +YK MV  G   +   +N++I   CK   +    + L
Sbjct: 336 TVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFL 395

Query: 224 CEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCRE 283
            EM  K    ++ TY  LI  +CK+G   EA  V + M  +G+S + V YN LI   C++
Sbjct: 396 DEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKD 455

Query: 284 GRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTY 341
           G++++A +++ ++  KG  P+  T+ +LI G C+ + +EEAL L   M  +GV    VTY
Sbjct: 456 GKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTY 515

Query: 342 NSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLE 401
           N+++    +   I+ A++L+ EM  +    DN+T N LI A CK G T   + +  +M  
Sbjct: 516 NTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFG 575

Query: 402 AGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEA 461
             +     +   LI+ FC+  +++ A + L  M+  G +P   +Y+ L++G C     + 
Sbjct: 576 EEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQE 635

Query: 462 LLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
            L L +   ++G+  D   Y  LI R+C +   + A +L      NG + + + ++ L
Sbjct: 636 ALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSIL 693



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 100/379 (26%), Positives = 167/379 (44%), Gaps = 43/379 (11%)

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEME-----FKD------------- 230
           K  +Q G + + H+Y +LI       +   ++KLL +M+     FK+             
Sbjct: 83  KAGLQRGYIHSFHVYYLLIDKLGNVGEFKMIDKLLKQMKDEGCVFKESLFILIMRYYGKA 142

Query: 231 ------------------VRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVT 272
                                   +YN ++ +         A  V   M   GISP + T
Sbjct: 143 GLPGQATRLLLDMWGVYCFEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYT 202

Query: 273 YNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMA 330
           +  ++  FC    +  A  L RD+   G  PN + Y  LI      N + EA++L E M 
Sbjct: 203 FGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMF 262

Query: 331 AKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTA 390
             G  P V T+N ++  LCK GRI +A +L + M  +    D +    L++  C++G   
Sbjct: 263 LMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVD 322

Query: 391 SAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLF-GMLDAGFSPSYCSYSWL 449
            A  + +++     +L    Y  LI+G+  +   + AK+LL+  M+ AGF P   +++ +
Sbjct: 323 EARAMLSKIPNPNTVL----YNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIM 378

Query: 450 VDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGI 509
           +DG C K    + L+ LDE V +G   +V  Y  LI  FCK+   + A ++ N M   G+
Sbjct: 379 IDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGL 438

Query: 510 LGDSVIYTSLAYAYWRAGE 528
             ++V Y  L  A  + G+
Sbjct: 439 SLNTVGYNCLIGALCKDGK 457



 Score = 44.3 bits (103), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 43/209 (20%), Positives = 85/209 (40%), Gaps = 13/209 (6%)

Query: 341 YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML 400
           Y  ++ KL   G  +  ++LL +M ++           ++  Y K G    A ++   M 
Sbjct: 97  YYLLIDKLGNVGEFKMIDKLLKQMKDEGCVFKESLFILIMRYYGKAGLPGQATRLLLDMW 156

Query: 401 EAGLMLDQFTYKA-------LIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGY 453
             G+   + T+K+       L+ G C      +A  + + ML  G SP+  ++  ++  +
Sbjct: 157 --GVYCFEPTFKSYNVVLEILVAGNCPK----VAPNVFYDMLSRGISPTVYTFGVVMKAF 210

Query: 454 CNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDS 513
           C  N  ++   LL +    G   +  +Y+ LI    +  +V+ A +L   M   G   D 
Sbjct: 211 CMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDV 270

Query: 514 VIYTSLAYAYWRAGEPKACSDILDDMYRR 542
             +  + +   +AG     + + D M  R
Sbjct: 271 QTFNDVIHGLCKAGRIHEAAKLHDRMLLR 299


>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 977

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 117/402 (29%), Positives = 197/402 (49%), Gaps = 20/402 (4%)

Query: 155 QMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSS 214
           +M    ++P+   CT L+N   K          ++ MV+ G++ +   Y VL++   K+ 
Sbjct: 550 EMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNG 609

Query: 215 DVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYN 274
            V+  E++  EM  K +  D+F+Y TLI  + K G   +A ++ D M + G++ +++ YN
Sbjct: 610 KVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYN 669

Query: 275 SLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAK 332
            L+ GFCR G + +A+ L  ++  KG  PN VTY T+IDGYC++ DL EA +L + M  K
Sbjct: 670 MLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLK 729

Query: 333 GVYPGVVTYNSILRKLCKEGRIRDANRLLN--EMNEKKIAPDNVTCNTLINAYCKIGDTA 390
           G+ P    Y +++   C   R+ D  R +   E NEK  A  +   N LIN   K G T 
Sbjct: 730 GLVPDSFVYTTLVDGCC---RLNDVERAITIFETNEKGCASSSAPFNALINWVFKFGKTE 786

Query: 391 SAMKVKNRMLEAGLMLDQF------TYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
               + NR+++     D+F      TY  +I   CK   ++ AKEL   M  A   P+  
Sbjct: 787 LTTDMINRLMDGSF--DKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVI 844

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
           +Y+ L++GY        +  + DE ++ G+  D  +Y  +I  F K+     A  L + M
Sbjct: 845 TYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQM 904

Query: 505 QGNGILGDSVIYT-----SLAYAYWRAGEPKACSDILDDMYR 541
                + D    +     +L   + + GE +    ++++M R
Sbjct: 905 FAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVVENMVR 946



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 121/419 (28%), Positives = 192/419 (45%), Gaps = 2/419 (0%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           + L++   M    L+P   +  +L++ L K +  +    +  +M  +G+ A+   Y++LI
Sbjct: 263 EALELKKSMSCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILI 322

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
               K  + D    L+ EM       D   Y+  I +  K+G   +A A+ D M   G++
Sbjct: 323 DGLLKGRNADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVT 382

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRL 325
           P    Y SLI GF RE  +R+   L  +IK      +  TY T + G C + DL+ A  +
Sbjct: 383 PGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNI 442

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
            + M A G  P VV Y ++++   ++ R  DA R+L EM E+ IAPD    N+LI    K
Sbjct: 443 VKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSK 502

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
                 A      M+E G   D FTY A I G+ +A E   A + +  ML+ G  P+   
Sbjct: 503 AKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVL 562

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
            + L++ YC K             V +G+  D   Y  L+    K  KV+ A+ +F+ M+
Sbjct: 563 CTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMR 622

Query: 506 GNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
           G GI  D   Y +L   + + G  +  S I D+M +  L   + IY      + +  EI
Sbjct: 623 GKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEI 681



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 131/516 (25%), Positives = 229/516 (44%), Gaps = 56/516 (10%)

Query: 77  SLQSHWTMIHILTKNKHFKSAQNMLEKI----ALRDFLSTPSVLNALVKIHDDPDGN--- 129
           S QS+  +I  L K K  + A+++L ++       D ++   +++ L+K  +    N   
Sbjct: 279 SRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNADAANGLV 338

Query: 130 ----SHVLSWLVIFYANL--KMTQDGLQ-----VFDQMRVHNLMPHLHACTVLLNSLAKD 178
               SH  S   + Y      M+++G       +FD M    + P   A   L+    ++
Sbjct: 339 HEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEGFFRE 398

Query: 179 RLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTY 238
           +     +++  ++ +  +V + + Y   +   C S D+D    ++ EM     R ++  Y
Sbjct: 399 KNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIY 458

Query: 239 NTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK- 297
            TLI  + +K    +A+ V   M  +GI+PD   YNSLI G  +  +M EAR    ++  
Sbjct: 459 TTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVE 518

Query: 298 ------------------------------------GATPNHVTYTTLIDGYCRANDLEE 321
                                               G  PN V  T LI+ YC+   + E
Sbjct: 519 NGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIE 578

Query: 322 ALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
           A      M  +G+     TY  ++  L K G++ DA  + +EM  K IAPD  +  TLI+
Sbjct: 579 ACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLID 638

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
            + K+G+   A  + + M++AGL  +   Y  L+ GFC++ E++ AKELL  M   GF P
Sbjct: 639 GFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPP 698

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
           +  +Y  ++DGYC   +     +L DE   +GL  D  VY  L+   C+   V+ A  +F
Sbjct: 699 NAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF 758

Query: 502 NLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILD 537
              +  G    S  + +L    ++ G+ +  +D+++
Sbjct: 759 ETNE-KGCASSSAPFNALINWVFKFGKTELTTDMIN 793



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 106/414 (25%), Positives = 193/414 (46%), Gaps = 7/414 (1%)

Query: 158 VHNLMPHLHACTVLLNS-----LAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCK 212
           VH ++ H  +   ++       ++K+   +    ++  M+  GV      Y  LI    +
Sbjct: 338 VHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEGFFR 397

Query: 213 SSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVT 272
             +V K  +LL E++ +++    +TY T +   C  G    A  +   M   G  P++V 
Sbjct: 398 EKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVI 457

Query: 273 YNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMA 330
           Y +LI  F ++ R  +A R+ ++++  G  P+   Y +LI G  +A  ++EA      M 
Sbjct: 458 YTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMV 517

Query: 331 AKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTA 390
             G  P   TY + +    + G    A++ + EM E  + P+ V C  LIN YCK G   
Sbjct: 518 ENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVI 577

Query: 391 SAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLV 450
            A      M+E G++ D  TY  L++G  K  +++ A+E+   M   G +P   SY  L+
Sbjct: 578 EACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLI 637

Query: 451 DGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGIL 510
           DG+    N +    + DE V  GL  +V +Y  L+  FC+  +++ A+ L + M G G  
Sbjct: 638 DGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFP 697

Query: 511 GDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
            ++V Y ++   Y ++G+      + D+M  + L+    +Y +      + N++
Sbjct: 698 PNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDV 751



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 130/549 (23%), Positives = 236/549 (42%), Gaps = 63/549 (11%)

Query: 79  QSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVK---IHDDPDGNSHVLSW 135
           +++ ++I    + K+ +    +L +I  R+ + +P      VK      D DG  +++  
Sbjct: 386 RAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKE 445

Query: 136 L--------VIFYANLKMT-------QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRL 180
           +        V+ Y  L  T        D ++V  +MR   + P       L+  L+K + 
Sbjct: 446 MGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKK 505

Query: 181 TDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNT 240
            D       +MV+ G   +   Y   I    ++ +    +K + EM    V  +      
Sbjct: 506 MDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTG 565

Query: 241 LIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KG 298
           LI  YCKKG   EA +    M  +GI  D  TY  L++G  + G++ +A  +F ++  KG
Sbjct: 566 LINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKG 625

Query: 299 ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDAN 358
             P+  +Y TLIDG+ +  ++++A  + + M   G+   V+ YN +L   C+ G I  A 
Sbjct: 626 IAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAK 685

Query: 359 RLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGF 418
            LL+EM+ K   P+ VT  T+I+ YCK GD A A ++ + M   GL+ D F Y  L+ G 
Sbjct: 686 ELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGC 745

Query: 419 CKAKEM--------------------------------------DIAKELLFGMLDAGFS 440
           C+  ++                                      D+   L+ G  D    
Sbjct: 746 CRLNDVERAITIFETNEKGCASSSAPFNALINWVFKFGKTELTTDMINRLMDGSFDKFGK 805

Query: 441 PSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRL 500
           P+  +Y+ ++D  C + N EA  +L        L   V  Y +L+  + K  +      +
Sbjct: 806 PNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSV 865

Query: 501 FNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM-----ITLKIYRSFS 555
           F+ +   GI  D+++Y+ +  A+ + G       +LD M+ +  +     +++   R+  
Sbjct: 866 FDEVIAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAKNAVDDGCKLSISTCRALL 925

Query: 556 ASYAKDNEI 564
           + +AK  E+
Sbjct: 926 SGFAKVGEM 934



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 155/639 (24%), Positives = 264/639 (41%), Gaps = 71/639 (11%)

Query: 17  ISAIMLKGHWAKLLNPNIASSLTSTAIHKVLLNLYNCCHI--PSLSCAFFKWAESAVPNY 74
           I+ I+ +G+W + L   ++S+L+     +V+L++     +  PS   +FF   +S     
Sbjct: 38  IAGILNQGNWRETL---VSSNLSIEINPEVVLSVLRSKRVDDPSKLLSFFNLVDSQKVT- 93

Query: 75  KHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLST---PSVLNALVKIHDDPDGNSH 131
           +  L S   +   L      + A +++ ++  R +       S++  L +     D    
Sbjct: 94  EQKLDSFSFLALDLCNFGSIEKAHSVVIRMIERKWPVAEVWSSIVRCLREFVGKSDDRVL 153

Query: 132 VLSWLVIFYANLKMTQDGLQVFDQMRVHNL--MPHLHACTVLLNSLAKDRLTDMVWKVYK 189
           +   L+  Y       + + VF   +  +L  +P L  C  LL++L K    D+ W VYK
Sbjct: 154 LFGILIDGYIEKGFLDEAVFVFSSTKDLDLDLVPSLARCNHLLDALLKRNRLDLFWDVYK 213

Query: 190 KMVQLGVVANIHLYNVLIHACCKSS---------------------DVDKVEKLLCEMEF 228
            MV+  VV ++  Y +LI A C+                       +VD+  +L   M  
Sbjct: 214 GMVERNVVFDVQSYEMLIGAHCRDGNVQLAKDVLLKTEEELGTATLNVDEALELKKSMSC 273

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLI----------- 277
           K +     +YN LI   CK+    +A ++   M   G+  D V Y+ LI           
Sbjct: 274 KGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNADA 333

Query: 278 ----------HGF--------------CREGRMREARRLFRDIK--GATPNHVTYTTLID 311
                     HGF               +EG M +A+ LF  +   G TP    Y +LI+
Sbjct: 334 ANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIE 393

Query: 312 GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAP 371
           G+ R  ++ +   L   +  + +     TY + ++ +C  G +  A  ++ EM      P
Sbjct: 394 GFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRP 453

Query: 372 DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
           + V   TLI  + +      A++V   M E G+  D F Y +LI G  KAK+MD A+  L
Sbjct: 454 NVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFL 513

Query: 432 FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
             M++ GF P   +Y   + GY       +  K + E +  G+  +  +   LI  +CKK
Sbjct: 514 LEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKK 573

Query: 492 EKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIY 551
            KV  A   F  M   GILGD+  YT L     + G+     +I  +M  + +   +  Y
Sbjct: 574 GKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSY 633

Query: 552 RSFSASYAK--DNEILDLFWSHVVDRGLMSKHIFKEMQL 588
            +    ++K  + +     +  +V  GL S  I   M L
Sbjct: 634 GTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLL 672



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 99/363 (27%), Positives = 181/363 (49%), Gaps = 12/363 (3%)

Query: 153 FDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCK 212
           F  M    ++      TVL+N L K+   +   +++ +M   G+  ++  Y  LI    K
Sbjct: 583 FRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSK 642

Query: 213 SSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVT 272
             ++ K   +  EM    + +++  YN L+  +C+ G   +A  + D M  +G  P+ VT
Sbjct: 643 LGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVT 702

Query: 273 YNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEALRLREVMA 330
           Y ++I G+C+ G + EA +LF +  +KG  P+   YTTL+DG CR ND+E A+ + E   
Sbjct: 703 YCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFET-N 761

Query: 331 AKGVYPGVVTYNSILRKLCKEGRIRDA----NRLLNEMNEKKIAPDNVTCNTLINAYCKI 386
            KG       +N+++  + K G+        NRL++   +K   P++VT N +I+  CK 
Sbjct: 762 EKGCASSSAPFNALINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKE 821

Query: 387 GDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSY 446
           G+  +A ++ + M +A LM    TY +L++G+ K         +   ++ AG  P    Y
Sbjct: 822 GNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMY 881

Query: 447 SWLVDGYCNKNNEEALLKLLDEFVSR-----GLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
           S +++ +  +      L LLD+  ++     G  + +S  RAL+  F K  +++ A+++ 
Sbjct: 882 SVIINAFLKEGMTTKALVLLDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVV 941

Query: 502 NLM 504
             M
Sbjct: 942 ENM 944



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 98/359 (27%), Positives = 168/359 (46%), Gaps = 45/359 (12%)

Query: 146 TQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNV 205
             D  ++F +MR   + P + +   L++  +K         ++ +MVQ G+ +N+ +YN+
Sbjct: 611 VNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNM 670

Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
           L+   C+S +++K ++LL EM  K    +  TY T+I  YCK G   EA  + D M+ +G
Sbjct: 671 LLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKG 730

Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFR-DIKG-------------------------- 298
           + PD   Y +L+ G CR   +  A  +F  + KG                          
Sbjct: 731 LVPDSFVYTTLVDGCCRLNDVERAITIFETNEKGCASSSAPFNALINWVFKFGKTELTTD 790

Query: 299 -------------ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSIL 345
                          PN VTY  +ID  C+  +LE A  L   M    + P V+TY S+L
Sbjct: 791 MINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLL 850

Query: 346 RKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRM-----L 400
               K GR  +   + +E+    I PDN+  + +INA+ K G T  A+ + ++M     +
Sbjct: 851 NGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAKNAV 910

Query: 401 EAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNE 459
           + G  L   T +AL+ GF K  EM++A++++  M+   + P   +   L++  C  +N+
Sbjct: 911 DDGCKLSISTCRALLSGFAKVGEMEVAEKVVENMVRLKYIPDSSTVIELINESCISSNQ 969


>gi|449454285|ref|XP_004144886.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Cucumis sativus]
 gi|449472527|ref|XP_004153621.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Cucumis sativus]
          Length = 875

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 129/495 (26%), Positives = 220/495 (44%), Gaps = 63/495 (12%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N   L  LV  Y    +   G+ + D+MR    +P+  A   +++SL  +  T    K+ 
Sbjct: 187 NEFSLGILVRGYCRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEKLV 246

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKD----VRADLFTYNTLIAL 244
           +KM ++G+  +I  +N  I A CKS  + +  ++  +M+  +     + +  TYN ++  
Sbjct: 247 EKMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEG 306

Query: 245 YCKKGMHYEALAVQDRME------------------REG----------------ISPDI 270
           +C +GM  EA A+ D M+                  R G                I P++
Sbjct: 307 FCSEGMFEEARAIFDSMKNSETLSLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNL 366

Query: 271 VTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREV 328
            +YN L+HG C+ G   +AR +   ++  G  P+ VTY+TL+ GYCR   + EA  +   
Sbjct: 367 YSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLRE 426

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M   G +P + T N +L  L KEGR  +A  LL  MNE+    DNVTCNT+IN  CK G+
Sbjct: 427 MIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGN 486

Query: 389 TASAMKVKNRMLEAG-----------------------LMLDQFTYKALIHGFCKAKEMD 425
              A+++ + M   G                        + D  TY  +I G CK   +D
Sbjct: 487 LDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVD 546

Query: 426 IAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
            AK+ L  M+    SP    +   +  YC +    +  ++L E   +G    +  Y +LI
Sbjct: 547 EAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLI 606

Query: 486 RRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
           +    + ++     L + M+  GI  +   Y ++       G+ K  + +LD+M ++ + 
Sbjct: 607 QGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGIS 666

Query: 546 ITLKIYRSFSASYAK 560
             +  +R    ++ K
Sbjct: 667 PNIYTFRILIGAFFK 681



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 142/586 (24%), Positives = 256/586 (43%), Gaps = 74/586 (12%)

Query: 56  IPSLSCAFFKWAESAVPNYKHSL---QSHWTMIHI----LTKNKHFKSAQNMLEKIALRD 108
           IP+ S +FFK +  +VP     L   + H  + H+    L++++ F           L D
Sbjct: 35  IPA-SSSFFKPSLQSVPAIARILITAKMHPQIDHLHQLLLSQHRDFAHPSGFSLVRTLAD 93

Query: 109 FLSTPSVLNALVKIHDD-PDGNSHVLSWLVIFYANLKMTQDG--LQVFDQMRVHNLMPHL 165
                + ++    + D  P     +  + ++F  +LK ++    + ++  M V  + P  
Sbjct: 94  LGLLENAISQFRSLRDRFPHDPPPISFYNLLFRCSLKESRVDCVIWLYKDMAVARVKPQT 153

Query: 166 HACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCE 225
           +   +L+++L +    +   +V+ KM + G   N     +L+   C++        LL E
Sbjct: 154 YTFNLLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDE 213

Query: 226 MEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGR 285
           M       +   YNT+I+  C +G   EA  + ++M   G+SPDIVT+N  I   C+ G+
Sbjct: 214 MRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQ 273

Query: 286 MREARRLFRDIKG------ATPNHVTYTTLIDGYCRANDLEEA------------LRLRE 327
           + EA R+FRD++         PN VTY  +++G+C     EEA            L LR 
Sbjct: 274 ILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIFDSMKNSETLSLRS 333

Query: 328 V----------------------MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMN 365
                                  MA K + P + +YN ++  LCK G   DA  +L  M 
Sbjct: 334 YNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMR 393

Query: 366 EKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMD 425
           E  +APD VT +TL++ YC+ G    A  V   M++ G   + +T   L+H   K     
Sbjct: 394 ESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRAS 453

Query: 426 IAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGL----------- 474
            A++LL  M + G+     + + +++G C   N +  ++++    +RG            
Sbjct: 454 EAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFI 513

Query: 475 -----------CVDVSV-YRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYA 522
                      C+  S+ Y  +I   CK  +VD A++    M G  +  DS+I+ +  Y 
Sbjct: 514 DLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYN 573

Query: 523 YWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLF 568
           Y + G+  +   +L +M ++    +L+ Y S       +N+I +++
Sbjct: 574 YCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIY 619



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 108/416 (25%), Positives = 186/416 (44%), Gaps = 30/416 (7%)

Query: 115 VLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNS 174
           +LN + + +  P  N +  + LV       M  D   +   MR   + P     + LL+ 
Sbjct: 353 ILNEMAEKNIKP--NLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHG 410

Query: 175 LAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRAD 234
             +         V ++M+Q+G   N++  N+L+H+  K     + E LL  M  +    D
Sbjct: 411 YCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLD 470

Query: 235 LFTYNTLIALYCKKGMHYEALAVQDRMEREGIS-----------------------PDIV 271
             T NT+I   CK G   +A+ +   M   G +                       PD +
Sbjct: 471 NVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSI 530

Query: 272 TYNSLIHGFCREGRMREARRLFRDIKGA--TPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           TY ++I G C+ GR+ EA++   ++ G   +P+ + + T I  YC+   L  A R+ + M
Sbjct: 531 TYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEM 590

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
             KG    + TYNS+++ L  E +I +   L++EM E+ I P+  T N +I+   + G  
Sbjct: 591 EKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKL 650

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD-AGFSPSYCSYSW 448
             A  + + ML+ G+  + +T++ LI  F KA +   A+EL    L   G   S   YS+
Sbjct: 651 KDATCLLDEMLQKGISPNIYTFRILIGAFFKACDFGAAQELFEIALSLCGHKESL--YSF 708

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
           + +            +L +  + R L +   +YR LI + CK  K+D A  + + M
Sbjct: 709 MFNELLAGGETLKAKELFEAALDRSLALKNFLYRDLIEKLCKDGKLDDASFILHKM 764



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 66/276 (23%), Positives = 122/276 (44%), Gaps = 36/276 (13%)

Query: 162 MPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEK 221
           +P       ++  L K    D   K   +M+   +  +  +++  I+  CK   +    +
Sbjct: 526 LPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFR 585

Query: 222 LLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFC 281
           +L EME K     L TYN+LI     +   +E   + D M+  GI P++ TYN++I    
Sbjct: 586 VLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLS 645

Query: 282 REGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREV----------- 328
             G++++A  L  ++  KG +PN  T+  LI  + +A D   A  L E+           
Sbjct: 646 EGGKLKDATCLLDEMLQKGISPNIYTFRILIGAFFKACDFGAAQELFEIALSLCGHKESL 705

Query: 329 --------------MAAKGVYPGVVT---------YNSILRKLCKEGRIRDANRLLNEMN 365
                         + AK ++   +          Y  ++ KLCK+G++ DA+ +L++M 
Sbjct: 706 YSFMFNELLAGGETLKAKELFEAALDRSLALKNFLYRDLIEKLCKDGKLDDASFILHKMM 765

Query: 366 EKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLE 401
           +K+ + D  +   +I+   K G   +A +   RM+E
Sbjct: 766 DKQYSFDPASFMPVIDELGKRGSKHAADEFAERMME 801



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/251 (23%), Positives = 116/251 (46%), Gaps = 8/251 (3%)

Query: 336 PGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKV 395
           P +  YN + R   KE R+     L  +M   ++ P   T N LI+A C++G   +A +V
Sbjct: 116 PPISFYNLLFRCSLKESRVDCVIWLYKDMAVARVKPQTYTFNLLISALCEMGYLENAREV 175

Query: 396 KNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCN 455
            ++M E G   ++F+   L+ G+C+A       +LL  M  +G  P+  +Y+ ++   C 
Sbjct: 176 FDKMSEKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCG 235

Query: 456 KNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILG---- 511
           +       KL+++    GL  D+  +   I   CK  ++  A R+F  MQ +  +G    
Sbjct: 236 EGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKP 295

Query: 512 DSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSH 571
           ++V Y  +   +   G  +    I D M +    ++L+ Y  +     +  ++L+   +H
Sbjct: 296 NTVTYNLMLEGFCSEGMFEEARAIFDSM-KNSETLSLRSYNIWMLGLVRSGKLLE---AH 351

Query: 572 VVDRGLMSKHI 582
           ++   +  K+I
Sbjct: 352 LILNEMAEKNI 362


>gi|449476381|ref|XP_004154721.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Cucumis sativus]
          Length = 875

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 129/495 (26%), Positives = 220/495 (44%), Gaps = 63/495 (12%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N   L  LV  Y    +   G+ + D+MR    +P+  A   +++SL  +  T    K+ 
Sbjct: 187 NEFSLGILVRGYCRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEKLV 246

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKD----VRADLFTYNTLIAL 244
           +KM ++G+  +I  +N  I A CKS  + +  ++  +M+  +     + +  TYN ++  
Sbjct: 247 EKMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEG 306

Query: 245 YCKKGMHYEALAVQDRME------------------REG----------------ISPDI 270
           +C +GM  EA A+ D M+                  R G                I P++
Sbjct: 307 FCSEGMFEEARAIFDSMKNSETLSLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNL 366

Query: 271 VTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREV 328
            +YN L+HG C+ G   +AR +   ++  G  P+ VTY+TL+ GYCR   + EA  +   
Sbjct: 367 YSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLRE 426

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M   G +P + T N +L  L KEGR  +A  LL  MNE+    DNVTCNT+IN  CK G+
Sbjct: 427 MIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGN 486

Query: 389 TASAMKVKNRMLEAG-----------------------LMLDQFTYKALIHGFCKAKEMD 425
              A+++ + M   G                        + D  TY  +I G CK   +D
Sbjct: 487 LDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVD 546

Query: 426 IAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
            AK+ L  M+    SP    +   +  YC +    +  ++L E   +G    +  Y +LI
Sbjct: 547 EAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLI 606

Query: 486 RRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
           +    + ++     L + M+  GI  +   Y ++       G+ K  + +LD+M ++ + 
Sbjct: 607 QGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGIS 666

Query: 546 ITLKIYRSFSASYAK 560
             +  +R    ++ K
Sbjct: 667 PNIYTFRILIGAFFK 681



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 142/586 (24%), Positives = 256/586 (43%), Gaps = 74/586 (12%)

Query: 56  IPSLSCAFFKWAESAVPNYKHSL---QSHWTMIHI----LTKNKHFKSAQNMLEKIALRD 108
           IP+ S +FFK +  +VP     L   + H  + H+    L++++ F           L D
Sbjct: 35  IPA-SSSFFKPSLQSVPAIARILITAKMHPQIDHLHQLLLSQHRDFAHPSGFSLVRTLAD 93

Query: 109 FLSTPSVLNALVKIHDD-PDGNSHVLSWLVIFYANLKMTQDG--LQVFDQMRVHNLMPHL 165
                + ++    + D  P     +  + ++F  +LK ++    + ++  M V  + P  
Sbjct: 94  LGLLENAISQFRSLRDRFPHDPPPISFYNLLFRCSLKESRVDCVIWLYKDMAVAKVKPQT 153

Query: 166 HACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCE 225
           +   +L+++L +    +   +V+ KM + G   N     +L+   C++        LL E
Sbjct: 154 YTFNLLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDE 213

Query: 226 MEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGR 285
           M       +   YNT+I+  C +G   EA  + ++M   G+SPDIVT+N  I   C+ G+
Sbjct: 214 MRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQ 273

Query: 286 MREARRLFRDIKG------ATPNHVTYTTLIDGYCRANDLEEA------------LRLRE 327
           + EA R+FRD++         PN VTY  +++G+C     EEA            L LR 
Sbjct: 274 ILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIFDSMKNSETLSLRS 333

Query: 328 V----------------------MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMN 365
                                  MA K + P + +YN ++  LCK G   DA  +L  M 
Sbjct: 334 YNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMR 393

Query: 366 EKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMD 425
           E  +APD VT +TL++ YC+ G    A  V   M++ G   + +T   L+H   K     
Sbjct: 394 ESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRAS 453

Query: 426 IAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGL----------- 474
            A++LL  M + G+     + + +++G C   N +  ++++    +RG            
Sbjct: 454 EAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFI 513

Query: 475 -----------CVDVSV-YRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYA 522
                      C+  S+ Y  +I   CK  +VD A++    M G  +  DS+I+ +  Y 
Sbjct: 514 DLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYN 573

Query: 523 YWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLF 568
           Y + G+  +   +L +M ++    +L+ Y S       +N+I +++
Sbjct: 574 YCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIY 619



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 108/416 (25%), Positives = 186/416 (44%), Gaps = 30/416 (7%)

Query: 115 VLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNS 174
           +LN + + +  P  N +  + LV       M  D   +   MR   + P     + LL+ 
Sbjct: 353 ILNEMAEKNIKP--NLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHG 410

Query: 175 LAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRAD 234
             +         V ++M+Q+G   N++  N+L+H+  K     + E LL  M  +    D
Sbjct: 411 YCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLD 470

Query: 235 LFTYNTLIALYCKKGMHYEALAVQDRMEREGIS-----------------------PDIV 271
             T NT+I   CK G   +A+ +   M   G +                       PD +
Sbjct: 471 NVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSI 530

Query: 272 TYNSLIHGFCREGRMREARRLFRDIKGA--TPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           TY ++I G C+ GR+ EA++   ++ G   +P+ + + T I  YC+   L  A R+ + M
Sbjct: 531 TYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEM 590

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
             KG    + TYNS+++ L  E +I +   L++EM E+ I P+  T N +I+   + G  
Sbjct: 591 EKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKL 650

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD-AGFSPSYCSYSW 448
             A  + + ML+ G+  + +T++ LI  F KA +   A+EL    L   G   S   YS+
Sbjct: 651 KDATCLLDEMLQKGISPNIYTFRILIGAFFKACDFGAAQELFEIALSLCGHKESL--YSF 708

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
           + +            +L +  + R L +   +YR LI + CK  K+D A  + + M
Sbjct: 709 MFNELLAGGETLKAKELFEAALDRSLALKNFLYRDLIEKLCKDGKLDDASFILHKM 764



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 66/276 (23%), Positives = 122/276 (44%), Gaps = 36/276 (13%)

Query: 162 MPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEK 221
           +P       ++  L K    D   K   +M+   +  +  +++  I+  CK   +    +
Sbjct: 526 LPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFR 585

Query: 222 LLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFC 281
           +L EME K     L TYN+LI     +   +E   + D M+  GI P++ TYN++I    
Sbjct: 586 VLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLS 645

Query: 282 REGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREV----------- 328
             G++++A  L  ++  KG +PN  T+  LI  + +A D   A  L E+           
Sbjct: 646 EGGKLKDATCLLDEMLQKGISPNIYTFRILIGAFFKACDFGAAQELFEIALSLCGHKESL 705

Query: 329 --------------MAAKGVYPGVVT---------YNSILRKLCKEGRIRDANRLLNEMN 365
                         + AK ++   +          Y  ++ KLCK+G++ DA+ +L++M 
Sbjct: 706 YSFMFNELLAGGETLKAKELFEAALDRSLALKNFLYRDLIEKLCKDGKLDDASFILHKMM 765

Query: 366 EKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLE 401
           +K+ + D  +   +I+   K G   +A +   RM+E
Sbjct: 766 DKQYSFDPASFMPVIDELGKRGSKHAADEFAERMME 801



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 61/251 (24%), Positives = 116/251 (46%), Gaps = 8/251 (3%)

Query: 336 PGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKV 395
           P +  YN + R   KE R+     L  +M   K+ P   T N LI+A C++G   +A +V
Sbjct: 116 PPISFYNLLFRCSLKESRVDCVIWLYKDMAVAKVKPQTYTFNLLISALCEMGYLENAREV 175

Query: 396 KNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCN 455
            ++M E G   ++F+   L+ G+C+A       +LL  M  +G  P+  +Y+ ++   C 
Sbjct: 176 FDKMSEKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCG 235

Query: 456 KNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILG---- 511
           +       KL+++    GL  D+  +   I   CK  ++  A R+F  MQ +  +G    
Sbjct: 236 EGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKP 295

Query: 512 DSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSH 571
           ++V Y  +   +   G  +    I D M +    ++L+ Y  +     +  ++L+   +H
Sbjct: 296 NTVTYNLMLEGFCSEGMFEEARAIFDSM-KNSETLSLRSYNIWMLGLVRSGKLLE---AH 351

Query: 572 VVDRGLMSKHI 582
           ++   +  K+I
Sbjct: 352 LILNEMAEKNI 362


>gi|255573471|ref|XP_002527661.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532966|gb|EEF34732.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 766

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 140/539 (25%), Positives = 249/539 (46%), Gaps = 26/539 (4%)

Query: 63  FFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVK- 121
           FFK    +   + HS+ +   +IH+L       +   M  +I LRD +S    +N  V  
Sbjct: 108 FFKAV--SFHGFSHSIYAFKIIIHVLAS-----AGLQMEVQIFLRDIISYYKEVNLDVSE 160

Query: 122 ----IHDDPD-----GNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLL 172
               + D P      G+  V + L+  +A   M  D   VF Q R   L  ++ +C  LL
Sbjct: 161 LFSTLLDSPQDAHMGGSIIVANVLIKVFAENNMLVDAADVFVQARRFGLELNILSCNFLL 220

Query: 173 NSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSS-----DVDKVEKLLCEME 227
           N  A+   T+ +  +++++   G   N+  Y ++++  CK S     D+ K  ++L EME
Sbjct: 221 NCFAEANQTEFIRSLFEELKDSGPSPNVFTYTIMMNYYCKGSFGKNIDIVKATEVLEEME 280

Query: 228 FKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMR 287
                  + TY   I   C+ G    AL +   +       +   YN++IH FCR G + 
Sbjct: 281 MNGESPTVVTYGAYIHGLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELH 340

Query: 288 EARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSIL 345
           EA  L  D++  G +P   +Y+ LIDG C+   +E+AL L E M    V P +VTY+S+ 
Sbjct: 341 EAFELLEDMRSHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLF 400

Query: 346 RKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLM 405
             LCK G    +  + + +  +    D ++ NTLIN +    D  SA K+ + M   G +
Sbjct: 401 DGLCKSGLTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSV 460

Query: 406 LDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKL 465
            + FT+  LIHGFCK + +D A E+   ML  G   +  + + + D +  + +    LKL
Sbjct: 461 PNSFTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALKL 520

Query: 466 LDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWR 525
           ++E    G+  +   Y  +I+  CK++K + A  +  +M  N +   ++ Y +L   Y +
Sbjct: 521 INEVQDLGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAK 580

Query: 526 AGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFW--SHVVDRGLMSKHI 582
              P     +   M +  +  ++  Y      ++  +++ + ++    ++ +GL+   I
Sbjct: 581 QSNPTKALLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEMIKKGLVPDEI 639



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 105/395 (26%), Positives = 189/395 (47%), Gaps = 2/395 (0%)

Query: 149 GLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIH 208
            L++   +R+ N   + +    +++   ++      +++ + M   G+    + Y++LI 
Sbjct: 307 ALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFELLEDMRSHGISPTAYSYSILID 366

Query: 209 ACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISP 268
             CK   V+K   L+ EM   +V+  L TY++L    CK G+   +L++   +  EG   
Sbjct: 367 GLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTEISLSMFHNLGAEGYKH 426

Query: 269 DIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLR 326
           D+++YN+LI+GF  +  M  A +L  +++  G+ PN  T+  LI G+C+   L++AL + 
Sbjct: 427 DVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFCKRQRLDKALEVF 486

Query: 327 EVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKI 386
            +M   GV   + T N +  +  +EG   +A +L+NE+ +  I P++ T N +I   CK 
Sbjct: 487 TIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQDLGIVPNSYTYNIVIKWLCKE 546

Query: 387 GDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSY 446
             T  A +V   ML+  +      Y  LI G+ K      A  L   ML  G  PS  +Y
Sbjct: 547 QKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQSNPTKALLLYAKMLKVGIPPSIVTY 606

Query: 447 SWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQG 506
           + L++ + N++  +    L  E + +GL  D  ++  +I  FCK   +  A  L+  M  
Sbjct: 607 TMLINMFSNRSKMQEAYYLFKEMIKKGLVPDEIIFTCIIAGFCKVGDMKSAWALYEEMSQ 666

Query: 507 NGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
            G   + V YT L   Y++         + + M R
Sbjct: 667 WGKSPNVVTYTCLIDGYFKIKRMDKADFLFNKMKR 701



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 96/391 (24%), Positives = 188/391 (48%), Gaps = 2/391 (0%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           +V ++M ++   P +      ++ L +    +   ++ + +       N + YN +IH  
Sbjct: 274 EVLEEMEMNGESPTVVTYGAYIHGLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEF 333

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           C++ ++ +  +LL +M    +    ++Y+ LI   CKKG   +AL + + M +  + P +
Sbjct: 334 CRNGELHEAFELLEDMRSHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSL 393

Query: 271 VTYNSLIHGFCREGRMREARRLFRDIKGATPNH--VTYTTLIDGYCRANDLEEALRLREV 328
           VTY+SL  G C+ G    +  +F ++      H  ++Y TLI+G+    D+  A +L   
Sbjct: 394 VTYSSLFDGLCKSGLTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHE 453

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M   G  P   T+N ++   CK  R+  A  +   M +  +  +  TCN + + + + G 
Sbjct: 454 MRMNGSVPNSFTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGH 513

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
              A+K+ N + + G++ + +TY  +I   CK ++ + A E+L  ML     P    Y+ 
Sbjct: 514 FWEALKLINEVQDLGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNT 573

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG 508
           L+DGY  ++N    L L  + +  G+   +  Y  LI  F  + K+  A  LF  M   G
Sbjct: 574 LIDGYAKQSNPTKALLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEMIKKG 633

Query: 509 ILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
           ++ D +I+T +   + + G+ K+   + ++M
Sbjct: 634 LVPDEIIFTCIIAGFCKVGDMKSAWALYEEM 664



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 103/395 (26%), Positives = 185/395 (46%), Gaps = 2/395 (0%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
            +  ++ + MR H + P  ++ ++L++ L K    +    + ++MVQ  V  ++  Y+ L
Sbjct: 340 HEAFELLEDMRSHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSL 399

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
               CKS   +    +   +  +  + D+ +YNTLI  +  +     A  +   M   G 
Sbjct: 400 FDGLCKSGLTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGS 459

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
            P+  T+N LIHGFC+  R+ +A  +F  +   G   N  T   + D + R     EAL+
Sbjct: 460 VPNSFTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALK 519

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           L   +   G+ P   TYN +++ LCKE +   A  +L  M +  + P  +  NTLI+ Y 
Sbjct: 520 LINEVQDLGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYA 579

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           K  +   A+ +  +ML+ G+     TY  LI+ F    +M  A  L   M+  G  P   
Sbjct: 580 KQSNPTKALLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEMIKKGLVPDEI 639

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
            ++ ++ G+C   + ++   L +E    G   +V  Y  LI  + K +++D A  LFN M
Sbjct: 640 IFTCIIAGFCKVGDMKSAWALYEEMSQWGKSPNVVTYTCLIDGYFKIKRMDKADFLFNKM 699

Query: 505 QGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
           + + +  D + YT+L + Y   G      ++ ++M
Sbjct: 700 KRDNVTPDGLTYTALIFGYQSLGYSDRVREMFNEM 734



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 104/377 (27%), Positives = 170/377 (45%), Gaps = 2/377 (0%)

Query: 146 TQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNV 205
            +  L + ++M   N+ P L   + L + L K  LT++   ++  +   G   ++  YN 
Sbjct: 374 VEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTEISLSMFHNLGAEGYKHDVISYNT 433

Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
           LI+      D+    KL+ EM       + FT+N LI  +CK+    +AL V   M + G
Sbjct: 434 LINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFCKRQRLDKALEVFTIMLKVG 493

Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEAL 323
           +  +I T N +   F REG   EA +L  +++  G  PN  TY  +I   C+    E+A 
Sbjct: 494 VQLNIFTCNIMADEFNREGHFWEALKLINEVQDLGIVPNSYTYNIVIKWLCKEQKTEKAW 553

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
            +  VM    V+P  + YN+++    K+     A  L  +M +  I P  VT   LIN +
Sbjct: 554 EVLPVMLKNNVFPCAIHYNTLIDGYAKQSNPTKALLLYAKMLKVGIPPSIVTYTMLINMF 613

Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY 443
                   A  +   M++ GL+ D+  +  +I GFCK  +M  A  L   M   G SP+ 
Sbjct: 614 SNRSKMQEAYYLFKEMIKKGLVPDEIIFTCIIAGFCKVGDMKSAWALYEEMSQWGKSPNV 673

Query: 444 CSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNL 503
            +Y+ L+DGY      +    L ++     +  D   Y ALI  +      D  + +FN 
Sbjct: 674 VTYTCLIDGYFKIKRMDKADFLFNKMKRDNVTPDGLTYTALIFGYQSLGYSDRVREMFNE 733

Query: 504 MQGNGILGDSVIYTSLA 520
           M+ NG+  +   Y +L 
Sbjct: 734 MKENGVFPNYTAYATLG 750



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 92/342 (26%), Positives = 160/342 (46%), Gaps = 2/342 (0%)

Query: 145 MTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYN 204
           +T+  L +F  +        + +   L+N     R      K+  +M   G V N   +N
Sbjct: 408 LTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFN 467

Query: 205 VLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMERE 264
            LIH  CK   +DK  ++   M    V+ ++FT N +   + ++G  +EAL + + ++  
Sbjct: 468 RLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQDL 527

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEA 322
           GI P+  TYN +I   C+E +  +A  +   +      P  + Y TLIDGY + ++  +A
Sbjct: 528 GIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQSNPTKA 587

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
           L L   M   G+ P +VTY  ++       ++++A  L  EM +K + PD +    +I  
Sbjct: 588 LLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEMIKKGLVPDEIIFTCIIAG 647

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +CK+GD  SA  +   M + G   +  TY  LI G+ K K MD A  L   M     +P 
Sbjct: 648 FCKVGDMKSAWALYEEMSQWGKSPNVVTYTCLIDGYFKIKRMDKADFLFNKMKRDNVTPD 707

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRAL 484
             +Y+ L+ GY +    + + ++ +E    G+  + + Y  L
Sbjct: 708 GLTYTALIFGYQSLGYSDRVREMFNEMKENGVFPNYTAYATL 749



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 45/172 (26%), Positives = 82/172 (47%), Gaps = 2/172 (1%)

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
           YA        L ++ +M    + P +   T+L+N  +        + ++K+M++ G+V +
Sbjct: 578 YAKQSNPTKALLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEMIKKGLVPD 637

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
             ++  +I   CK  D+     L  EM       ++ TY  LI  Y K     +A  + +
Sbjct: 638 EIIFTCIIAGFCKVGDMKSAWALYEEMSQWGKSPNVVTYTCLIDGYFKIKRMDKADFLFN 697

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTL 309
           +M+R+ ++PD +TY +LI G+   G     R +F ++K  G  PN+  Y TL
Sbjct: 698 KMKRDNVTPDGLTYTALIFGYQSLGYSDRVREMFNEMKENGVFPNYTAYATL 749


>gi|224131362|ref|XP_002328520.1| predicted protein [Populus trichocarpa]
 gi|222838235|gb|EEE76600.1| predicted protein [Populus trichocarpa]
          Length = 501

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 121/422 (28%), Positives = 202/422 (47%), Gaps = 12/422 (2%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D +  F +M   N  P        L S+AK +    V  +  +M   GV  N +  N+LI
Sbjct: 69  DAMASFYRMIHMNPRPSFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLNILI 128

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           ++ C+ S +     +L +M    ++ D  T+ TLI   C +G   EA+ + + M      
Sbjct: 129 NSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRDAM 188

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
           P+ VT+  L+   C++G + EAR +F  +  KG  PN  TY  L++GYC   ++ +A ++
Sbjct: 189 PNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKV 248

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
            E+M  KG  P V +Y+ ++   CK  RI +A  LL +M+EK++ P+ VT NTL+   C 
Sbjct: 249 FEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCH 308

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
                 A ++  +M  +G++ +  TY  L+ G CK   ++ A +LL  M +    P    
Sbjct: 309 ASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVL 368

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+ L+ G       E   +L  +  + G+   V  Y  +I+   K+   D A +LF  M+
Sbjct: 369 YNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKME 428

Query: 506 GNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEIL 565
            +G L DS  Y  +   + +  +P     ++D+M  RR          FSA  +    +L
Sbjct: 429 DDGFLPDSCSYNVIIQGFLQNQDPSTAIQLIDEMVGRR----------FSADSSTFKMLL 478

Query: 566 DL 567
           DL
Sbjct: 479 DL 480



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 111/400 (27%), Positives = 192/400 (48%), Gaps = 2/400 (0%)

Query: 122 IHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLT 181
           IH +P  +   L   +   A  K     + + +QM +  +  + +   +L+NSL +    
Sbjct: 78  IHMNPRPSFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLNILINSLCRLSHI 137

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
                V  KM +LG+  +   +  LI+  C    + +  +L  EM  +D   +  T+  L
Sbjct: 138 HFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRDAMPNTVTFTIL 197

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGA 299
           + + CKKGM  EA  V + M  +G+ P+I TYN+L++G+C    M +A ++F  +  KG 
Sbjct: 198 VDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKGC 257

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
            P+  +Y+ LI+GYC++  ++EA  L   M+ K + P  VTYN++++ LC    + +A  
Sbjct: 258 APSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQE 317

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
           L  +M    + P+  T + L++  CK G    A+K+   M E  L  D   Y  LI G  
Sbjct: 318 LFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMF 377

Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
            A ++++AKEL   +   G  PS  +Y+ ++ G   +   +   KL  +    G   D  
Sbjct: 378 IAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLPDSC 437

Query: 480 VYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
            Y  +I+ F + +    A +L + M G     DS  +  L
Sbjct: 438 SYNVIIQGFLQNQDPSTAIQLIDEMVGRRFSADSSTFKML 477



 Score = 40.0 bits (92), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 27/131 (20%), Positives = 57/131 (43%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           ++ L++   M+   L P +    +L+  +      ++  +++ K+   G+  ++  YN++
Sbjct: 348 EEALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIM 407

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           I    K    D+  KL  +ME      D  +YN +I  + +      A+ + D M     
Sbjct: 408 IKGLLKEGLSDEAYKLFRKMEDDGFLPDSCSYNVIIQGFLQNQDPSTAIQLIDEMVGRRF 467

Query: 267 SPDIVTYNSLI 277
           S D  T+  L+
Sbjct: 468 SADSSTFKMLL 478


>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
 gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
          Length = 545

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 130/399 (32%), Positives = 191/399 (47%), Gaps = 7/399 (1%)

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
           P + A TV++N L +++  D  + V ++ V+ G   +   YNV I   CK+  VD   +L
Sbjct: 5   PDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQL 64

Query: 223 LCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR 282
           L +M+ K       TY  L+    K G   EA+AV ++M  +G SP + TY  +I G  +
Sbjct: 65  LKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSK 124

Query: 283 EGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL-REVMAAK---GVYP 336
            GR+ EARR+F D+   G  P+   YT LI G C++   EEA  L +E  A K      P
Sbjct: 125 AGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVP 184

Query: 337 GVVTYNSILRKLCKEGRIRDANRLL-NEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKV 395
            VVTY S++  LCK GRI +A ++  +E  E+   PD VT  ++I+  CK+G      + 
Sbjct: 185 DVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCER 244

Query: 396 KNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCN 455
            + M   G   D  TY ALI GF KAK +  A  +   ML +G   S  +Y+ ++DG C 
Sbjct: 245 FHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCK 304

Query: 456 KNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVI 515
                           RG    V  Y AL+  FC +  V  A  LF  M   G   + V 
Sbjct: 305 AGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVS 364

Query: 516 YTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSF 554
           Y  +     RAG+        + + +RRL   +  + +F
Sbjct: 365 YNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAF 403



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 133/486 (27%), Positives = 213/486 (43%), Gaps = 22/486 (4%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           SVL   V+   +PD  ++  +  +      +   D  Q+  +M     +P     T L++
Sbjct: 28  SVLERAVRAGCEPDYVTY--NVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVD 85

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
            L K    D    V ++MV+ G    +  Y V+I    K+  V++  ++  +M     R 
Sbjct: 86  GLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRP 145

Query: 234 DLFTYNTLIALYCKKGMHYEALAV----QDRMEREGISPDIVTYNSLIHGFCREGRMREA 289
           D F Y  LI   CK G   EA A+      R       PD+VTY SLI G C+ GR+ EA
Sbjct: 146 DAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTYTSLIDGLCKAGRILEA 205

Query: 290 RRLFRDI---KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILR 346
           R++F D    +G  P+ VTYT++IDG C+   +EE       M  +G  P  VTY +++ 
Sbjct: 206 RQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALID 265

Query: 347 KLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLML 406
              K   I  A+R+  +M +       VT N +++  CK G  A A      M E G + 
Sbjct: 266 GFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVA 325

Query: 407 DQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLL 466
              TY AL+ GFC    +  A EL   MLD G  P+  SY+ ++ G C            
Sbjct: 326 TVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYF 385

Query: 467 DEFVSRGLCVDVSVYRALIRRFCKK-EKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWR 525
           ++ + R LC DV  + A +   C++ + V     LF  M   G   +   Y+ L     R
Sbjct: 386 EKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQGTSPNLHSYSILMDGICR 445

Query: 526 AGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKE 585
           AG  +   +I  +M  R +   + ++ +             + W  +  R   +  +F+E
Sbjct: 446 AGGLEVALEIFREMVSRGVAPDVVVFNTL------------IRWLCIAGRVDEALEVFRE 493

Query: 586 MQLRNS 591
           ++ R++
Sbjct: 494 LERRSA 499



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 92/273 (33%), Positives = 136/273 (49%), Gaps = 8/273 (2%)

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLF-RDIK-GATPNHVTYTTLIDGYCRANDLEEALR 324
           SPD+V +  +I+G CRE R+ EA  +  R ++ G  P++VTY   IDG C+A  +++A +
Sbjct: 4   SPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQ 63

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           L + M  K   P  VTY +++  L K GR+ +A  +L +M EK  +P   T   +I+   
Sbjct: 64  LLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLS 123

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIA----KELLFGMLDAGFS 440
           K G    A ++   ML  G   D F Y ALI G CK+ + + A    KE       A   
Sbjct: 124 KAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAV 183

Query: 441 PSYCSYSWLVDGYCNKNN-EEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQR 499
           P   +Y+ L+DG C      EA     DE V RG   D   Y ++I   CK  +V+    
Sbjct: 184 PDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCE 243

Query: 500 LFNLMQGNGILGDSVIYTSLAYAYWRAGE-PKA 531
            F+ M+  G   D+V Y +L   + +A   PKA
Sbjct: 244 RFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKA 276



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 97/190 (51%), Gaps = 4/190 (2%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           +++F +M      P+L +  +++  L +       +  ++K++Q  +  +++ +N  +H 
Sbjct: 347 VELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHG 406

Query: 210 CCKSSDV--DKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
            C+  D   D VE L   M  +    +L +Y+ L+   C+ G    AL +   M   G++
Sbjct: 407 LCQRLDTVSDGVE-LFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVA 465

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI-KGATPNHVTYTTLIDGYCRANDLEEALRLR 326
           PD+V +N+LI   C  GR+ EA  +FR++ + + P+  +Y +L+DG  R   +EEA  L 
Sbjct: 466 PDVVVFNTLIRWLCIAGRVDEALEVFRELERRSAPDAWSYWSLLDGLSRCERMEEARLLS 525

Query: 327 EVMAAKGVYP 336
             M  +G  P
Sbjct: 526 FHMKLQGCAP 535



 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 49/112 (43%)

Query: 440 SPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQR 499
           SP   +++ +++G C +   +    +L+  V  G   D   Y   I   CK E+VD A +
Sbjct: 4   SPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQ 63

Query: 500 LFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIY 551
           L   M     L  +V YT+L     +AG       +L+ M  +    TLK Y
Sbjct: 64  LLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTY 115


>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62680, mitochondrial; Flags: Precursor
 gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 548

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 123/417 (29%), Positives = 197/417 (47%), Gaps = 37/417 (8%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D + +F  M      P +     LL+++ K +  D+V  + KKM  LG+  +++ +N++I
Sbjct: 68  DAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVI 127

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           +  C    V     +L +M       D  T  +L+  +C++    +A+++ D+M   G  
Sbjct: 128 NCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYK 187

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
           PDIV YN++I   C+  R+ +A   F++I  KG  PN VTYT L++G C ++   +A RL
Sbjct: 188 PDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARL 247

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVT---------- 375
              M  K + P V+TY+++L    K G++ +A  L  EM    I PD VT          
Sbjct: 248 LSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCL 307

Query: 376 ------------------C-------NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
                             C       NTLIN +CK       MK+   M + GL+ +  T
Sbjct: 308 HDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVT 367

Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFV 470
           Y  LI GF +A ++D A+E    M   G SP   +Y+ L+ G C+    E  L + ++  
Sbjct: 368 YNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQ 427

Query: 471 SRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
            R + +D+  Y  +IR  CK  KV+ A  LF  +   G+  D V YT++       G
Sbjct: 428 KREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKG 484



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 125/406 (30%), Positives = 197/406 (48%), Gaps = 7/406 (1%)

Query: 171 LLNSLAKDRLTDM----VWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEM 226
           L   L+K RL D+       ++  MV+     +I  +N L+ A  K    D V  L  +M
Sbjct: 52  LRERLSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKM 111

Query: 227 EFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRM 286
           E   +R DL+T+N +I  +C       AL++  +M + G  PD VT  SL++GFCR  R+
Sbjct: 112 EVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRV 171

Query: 287 REARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSI 344
            +A  L   +   G  P+ V Y  +ID  C+   + +A    + +  KG+ P VVTY ++
Sbjct: 172 SDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTAL 231

Query: 345 LRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGL 404
           +  LC   R  DA RLL++M +KKI P+ +T + L++A+ K G    A ++   M+   +
Sbjct: 232 VNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSI 291

Query: 405 MLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLK 464
             D  TY +LI+G C    +D A ++   M+  G      SY+ L++G+C     E  +K
Sbjct: 292 DPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMK 351

Query: 465 LLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYW 524
           L  E   RGL  +   Y  LI+ F +   VD AQ  F+ M   GI  D   Y  L     
Sbjct: 352 LFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLC 411

Query: 525 RAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWS 570
             GE +    I +DM +R + + +  Y +      K  ++ +  WS
Sbjct: 412 DNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEA-WS 456



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 99/346 (28%), Positives = 177/346 (51%), Gaps = 4/346 (1%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           S+L  ++K+  +PD     +  LV  +       D + + D+M      P + A   +++
Sbjct: 141 SILGKMLKLGYEPD--RVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIID 198

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
           SL K +  +  +  +K++ + G+  N+  Y  L++  C SS      +LL +M  K +  
Sbjct: 199 SLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITP 258

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           ++ TY+ L+  + K G   EA  + + M R  I PDIVTY+SLI+G C   R+ EA ++F
Sbjct: 259 NVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMF 318

Query: 294 RDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
             +  KG   + V+Y TLI+G+C+A  +E+ ++L   M+ +G+    VTYN++++   + 
Sbjct: 319 DLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQA 378

Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
           G +  A    ++M+   I+PD  T N L+   C  G+   A+ +   M +  + LD  TY
Sbjct: 379 GDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTY 438

Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKN 457
             +I G CK  +++ A  L   +   G  P   +Y+ ++ G C K 
Sbjct: 439 TTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKG 484



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 98/365 (26%), Positives = 183/365 (50%), Gaps = 4/365 (1%)

Query: 149 GLQVFDQMRVHNLMPHLHACTVLLNSLAK-DRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
            L +  +M      P       L+N   + +R++D V  +  KMV++G   +I  YN +I
Sbjct: 139 ALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAV-SLVDKMVEIGYKPDIVAYNAII 197

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
            + CK+  V+       E+E K +R ++ TY  L+   C      +A  +   M ++ I+
Sbjct: 198 DSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKIT 257

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
           P+++TY++L+  F + G++ EA+ LF ++      P+ VTY++LI+G C  + ++EA ++
Sbjct: 258 PNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQM 317

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
            ++M +KG    VV+YN+++   CK  R+ D  +L  EM+++ +  + VT NTLI  + +
Sbjct: 318 FDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQ 377

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            GD   A +  ++M   G+  D +TY  L+ G C   E++ A  +   M          +
Sbjct: 378 AGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVT 437

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+ ++ G C     E    L      +GL  D+  Y  ++   C K  +   + L+  M+
Sbjct: 438 YTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMK 497

Query: 506 GNGIL 510
             G++
Sbjct: 498 QEGLM 502



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 81/308 (26%), Positives = 147/308 (47%), Gaps = 34/308 (11%)

Query: 54  CHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSA----QNMLEKIALRDF 109
           C    ++ AF  + E      + ++ ++  +++ L  +  +  A     +M++K    + 
Sbjct: 201 CKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNV 260

Query: 110 LSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQD-----------GL-------- 150
           ++  ++L+A VK       N  VL    +F   ++M+ D           GL        
Sbjct: 261 ITYSALLDAFVK-------NGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDE 313

Query: 151 --QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIH 208
             Q+FD M     +  + +   L+N   K +  +   K++++M Q G+V+N   YN LI 
Sbjct: 314 ANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQ 373

Query: 209 ACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISP 268
              ++ DVDK ++   +M+F  +  D++TYN L+   C  G   +AL + + M++  +  
Sbjct: 374 GFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDL 433

Query: 269 DIVTYNSLIHGFCREGRMREARRLF--RDIKGATPNHVTYTTLIDGYCRANDLEEALRLR 326
           DIVTY ++I G C+ G++ EA  LF    +KG  P+ VTYTT++ G C    L E   L 
Sbjct: 434 DIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALY 493

Query: 327 EVMAAKGV 334
             M  +G+
Sbjct: 494 TKMKQEGL 501


>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
          Length = 548

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 123/417 (29%), Positives = 197/417 (47%), Gaps = 37/417 (8%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D + +F  M      P +     LL+++ K +  D+V  + KKM  LG+  +++ +N++I
Sbjct: 68  DAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVI 127

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           +  C    V     +L +M       D  T  +L+  +C++    +A+++ D+M   G  
Sbjct: 128 NCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYK 187

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
           PDIV YN++I   C+  R+ +A   F++I  KG  PN VTYT L++G C ++   +A RL
Sbjct: 188 PDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARL 247

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVT---------- 375
              M  K + P V+TY+++L    K G++ +A  L  EM    I PD VT          
Sbjct: 248 LSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCL 307

Query: 376 ------------------C-------NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
                             C       NTLIN +CK       MK+   M + GL+ +  T
Sbjct: 308 HDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVT 367

Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFV 470
           Y  LI GF +A ++D A+E    M   G SP   +Y+ L+ G C+    E  L + ++  
Sbjct: 368 YNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQ 427

Query: 471 SRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
            R + +D+  Y  +IR  CK  KV+ A  LF  +   G+  D V YT++       G
Sbjct: 428 KREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKG 484



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 124/406 (30%), Positives = 197/406 (48%), Gaps = 7/406 (1%)

Query: 171 LLNSLAKDRLTDM----VWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEM 226
           L   L+K RL D+       ++  MV+     +I  +N L+ A  K    D V  L  +M
Sbjct: 52  LRERLSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKM 111

Query: 227 EFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRM 286
           E   +R DL+T+N +I  +C       AL++  +M + G  PD VT  SL++GFCR  R+
Sbjct: 112 EVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRV 171

Query: 287 REARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSI 344
            +A  L   +   G  P+ V Y  +ID  C+   + +A    + +  KG+ P VVTY ++
Sbjct: 172 SDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTAL 231

Query: 345 LRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGL 404
           +  LC   R  DA RLL++M +KKI P+ +T + L++A+ K G    A ++   M+   +
Sbjct: 232 VNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSI 291

Query: 405 MLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLK 464
             D  TY +L++G C    +D A ++   M+  G      SY+ L++G+C     E  +K
Sbjct: 292 DPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMK 351

Query: 465 LLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYW 524
           L  E   RGL  +   Y  LI+ F +   VD AQ  F+ M   GI  D   Y  L     
Sbjct: 352 LFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLC 411

Query: 525 RAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWS 570
             GE +    I +DM +R + + +  Y +      K  ++ +  WS
Sbjct: 412 DNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEA-WS 456



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 98/346 (28%), Positives = 177/346 (51%), Gaps = 4/346 (1%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           S+L  ++K+  +PD     +  LV  +       D + + D+M      P + A   +++
Sbjct: 141 SILGKMLKLGYEPD--RVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIID 198

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
           SL K +  +  +  +K++ + G+  N+  Y  L++  C SS      +LL +M  K +  
Sbjct: 199 SLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITP 258

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           ++ TY+ L+  + K G   EA  + + M R  I PDIVTY+SL++G C   R+ EA ++F
Sbjct: 259 NVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMF 318

Query: 294 RDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
             +  KG   + V+Y TLI+G+C+A  +E+ ++L   M+ +G+    VTYN++++   + 
Sbjct: 319 DLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQA 378

Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
           G +  A    ++M+   I+PD  T N L+   C  G+   A+ +   M +  + LD  TY
Sbjct: 379 GDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTY 438

Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKN 457
             +I G CK  +++ A  L   +   G  P   +Y+ ++ G C K 
Sbjct: 439 TTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKG 484



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 97/365 (26%), Positives = 183/365 (50%), Gaps = 4/365 (1%)

Query: 149 GLQVFDQMRVHNLMPHLHACTVLLNSLAK-DRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
            L +  +M      P       L+N   + +R++D V  +  KMV++G   +I  YN +I
Sbjct: 139 ALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAV-SLVDKMVEIGYKPDIVAYNAII 197

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
            + CK+  V+       E+E K +R ++ TY  L+   C      +A  +   M ++ I+
Sbjct: 198 DSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKIT 257

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
           P+++TY++L+  F + G++ EA+ LF ++      P+ VTY++L++G C  + ++EA ++
Sbjct: 258 PNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQM 317

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
            ++M +KG    VV+YN+++   CK  R+ D  +L  EM+++ +  + VT NTLI  + +
Sbjct: 318 FDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQ 377

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            GD   A +  ++M   G+  D +TY  L+ G C   E++ A  +   M          +
Sbjct: 378 AGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVT 437

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+ ++ G C     E    L      +GL  D+  Y  ++   C K  +   + L+  M+
Sbjct: 438 YTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMK 497

Query: 506 GNGIL 510
             G++
Sbjct: 498 QEGLM 502



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 80/266 (30%), Positives = 132/266 (49%), Gaps = 12/266 (4%)

Query: 79  QSHWT-MIHILTKNKHFKSAQNMLEKIALRD-FLSTPSVLNA------LVKIHDDPDGNS 130
            S W+    +L+     K   N++   AL D F+    VL A      +V++  DPD  +
Sbjct: 238 SSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVT 297

Query: 131 HVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKK 190
           +  S LV          +  Q+FD M     +  + +   L+N   K +  +   K++++
Sbjct: 298 Y--SSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFRE 355

Query: 191 MVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGM 250
           M Q G+V+N   YN LI    ++ DVDK ++   +M+F  +  D++TYN L+   C  G 
Sbjct: 356 MSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGE 415

Query: 251 HYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF--RDIKGATPNHVTYTT 308
             +AL + + M++  +  DIVTY ++I G C+ G++ EA  LF    +KG  P+ VTYTT
Sbjct: 416 LEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTT 475

Query: 309 LIDGYCRANDLEEALRLREVMAAKGV 334
           ++ G C    L E   L   M  +G+
Sbjct: 476 MMSGLCTKGLLHEVEALYTKMKQEGL 501


>gi|222628656|gb|EEE60788.1| hypothetical protein OsJ_14372 [Oryza sativa Japonica Group]
          Length = 748

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 121/465 (26%), Positives = 215/465 (46%), Gaps = 38/465 (8%)

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           L+  Y  +   +  L VF ++    L P + +   L++  +K+   D  ++++ KM++  
Sbjct: 128 LIDCYRRMHRPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYELFYKMIEQS 187

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
           V  ++  YN LI   CK+ ++ K E++L +M    +R +  TYN+LI  Y   GM  E++
Sbjct: 188 VSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYSTAGMWKESV 247

Query: 256 AVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGY 313
            V   M   G+ P +V  NS IH  CR  R++EA+ +F    +KG  PN ++Y+TL+ GY
Sbjct: 248 RVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGY 307

Query: 314 CRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDN 373
                      L  +M +KG+ P    +N ++    + G +  A  +  +M  K + PD 
Sbjct: 308 AAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDT 367

Query: 374 VTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFG 433
           VT  T+I++ C+IG    A+   N M++ G+   +  Y+ LI G C   E+  AKEL+  
Sbjct: 368 VTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISE 427

Query: 434 MLD------------------------------------AGFSPSYCSYSWLVDGYCNKN 457
           M++                                     G  P+  +++ L++GYC   
Sbjct: 428 MMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVG 487

Query: 458 NEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYT 517
           N E    LLD   S G+  +  +Y  L+  +CK  ++D A  +F  M   G+   SV+Y 
Sbjct: 488 NMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYN 547

Query: 518 SLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDN 562
            + +  ++A    A   +  +M      ++++ Y        ++N
Sbjct: 548 IILHGLFQARRTTAAKKMFHEMIESGTTVSIQTYGVVLGGLCRNN 592



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 113/407 (27%), Positives = 194/407 (47%), Gaps = 3/407 (0%)

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
           P ++   +L++   +    ++   V+ ++++ G+  ++  YN LI    K  +VDK  +L
Sbjct: 120 PTIYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYEL 179

Query: 223 LCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR 282
             +M  + V  D+ TYN+LI   CK     ++  V ++M   GI P+  TYNSLI+G+  
Sbjct: 180 FYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYST 239

Query: 283 EGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVT 340
            G  +E+ R+F+++   G  P  V   + I   CR N ++EA  + + M  KG  P +++
Sbjct: 240 AGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNIIS 299

Query: 341 YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML 400
           Y+++L     EG   + N L+N M  K I P++   N LINAY + G    AM +   M 
Sbjct: 300 YSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQ 359

Query: 401 EAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEE 460
             G++ D  T+  +I   C+   +D A      M+D G  PS   Y  L+ G CN     
Sbjct: 360 NKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELV 419

Query: 461 ALLKLLDEFVSRGLCVD-VSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
              +L+ E +++ +    V  + ++I    K+ +V   + + +LM   G   + V + SL
Sbjct: 420 KAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSL 479

Query: 520 AYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
              Y   G  +    +LD M    +     IY +    Y K+  I D
Sbjct: 480 MEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDD 526



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 127/542 (23%), Positives = 236/542 (43%), Gaps = 25/542 (4%)

Query: 32  PNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTK- 90
           P+ A+   +   + +L++ Y   H P L+ A F             + S+ T+I   +K 
Sbjct: 113 PHAAADAPTIYTYNILIDCYRRMHRPELALAVFGRLLRT--GLGPDVCSYNTLIDGFSKE 170

Query: 91  ---NKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHD--------------DPDGNSHVL 133
              +K ++    M+E+    D ++  S+++ L K  +                  N+   
Sbjct: 171 GEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTY 230

Query: 134 SWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQ 193
           + L+  Y+   M ++ ++VF +M    L+P +  C   +++L +         ++  MV 
Sbjct: 231 NSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVL 290

Query: 194 LGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYE 253
            G   NI  Y+ L+H          +  L+  M  K +  +   +N LI  Y + GM  +
Sbjct: 291 KGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDK 350

Query: 254 ALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR---DIKGATPNHVTYTTLI 310
           A+ + + M+ +G+ PD VT+ ++I   CR GR+ +A   F    DI G  P+   Y  LI
Sbjct: 351 AMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDI-GVPPSEAVYRCLI 409

Query: 311 DGYCRANDLEEALRLREVMAAKGV-YPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI 369
            G C   +L +A  L   M  K +  PGV  ++SI+  L KEGR+ +   +++ M +   
Sbjct: 410 QGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQ 469

Query: 370 APDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKE 429
            P+ VT N+L+  YC +G+   A  + + M   G+  + + Y  L+ G+CK   +D A  
Sbjct: 470 RPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALT 529

Query: 430 LLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFC 489
           +   ML  G  P+   Y+ ++ G        A  K+  E +  G  V +  Y  ++   C
Sbjct: 530 VFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIESGTTVSIQTYGVVLGGLC 589

Query: 490 KKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLK 549
           +    D A  L   +    +  D + +  +  A  + G  +   ++   +    L+ T+ 
Sbjct: 590 RNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQEAKELFAAISTYGLVPTVH 649

Query: 550 IY 551
            Y
Sbjct: 650 TY 651



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 118/470 (25%), Positives = 206/470 (43%), Gaps = 27/470 (5%)

Query: 83  TMIHILTKNKHFKSAQNMLEKIALRD--------------------FLSTPSVLNALVKI 122
           + IH L ++   K A+++ + + L+                     F +  S++N +V  
Sbjct: 267 SFIHALCRHNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSK 326

Query: 123 HDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAK-DRLT 181
              P  N    + L+  YA   M    + +F+ M+   ++P       +++SL +  RL 
Sbjct: 327 GIVP--NHRFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLD 384

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTY-NT 240
           D + K +  MV +GV  +  +Y  LI  CC   ++ K ++L+ EM  KD+      Y ++
Sbjct: 385 DALHK-FNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSS 443

Query: 241 LIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--G 298
           +I    K+G   E   + D M + G  P++VT+NSL+ G+C  G M EA  L   +   G
Sbjct: 444 IINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIG 503

Query: 299 ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDAN 358
             PN   Y TL+DGYC+   +++AL +   M  KGV P  V YN IL  L +  R   A 
Sbjct: 504 IEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAK 563

Query: 359 RLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGF 418
           ++ +EM E        T   ++   C+   T  A  +  ++    +  D  T+  +I   
Sbjct: 564 KMFHEMIESGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAM 623

Query: 419 CKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDV 478
            K      AKEL   +   G  P+  +Y+ ++     + + E    L       G   D 
Sbjct: 624 LKVGRRQEAKELFAAISTYGLVPTVHTYNLMISNLIKEESYEEADNLFISVEKSGRAPDS 683

Query: 479 SVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
            +   ++R   KK +V  A    +++  N +  ++   + LA  + R G+
Sbjct: 684 RLLNHIVRMLLKKAEVAKASNYLSIIDENNLTLEASTISLLASLFSREGK 733



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 72/280 (25%), Positives = 128/280 (45%), Gaps = 2/280 (0%)

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
            P   TY  LID Y R +  E AL +   +   G+ P V +YN+++    KEG +  A  
Sbjct: 119 APTIYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYE 178

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
           L  +M E+ ++PD VT N+LI+  CK  +   + +V  +M++AG+  +  TY +LI+G+ 
Sbjct: 179 LFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYS 238

Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
            A     +  +   M  +G  P   + +  +   C  N  +    + D  V +G   ++ 
Sbjct: 239 TAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNII 298

Query: 480 VYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
            Y  L+  +  +        L NLM   GI+ +   +  L  AY R G       I +DM
Sbjct: 299 SYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDM 358

Query: 540 YRRRLMITLKIYRSFSASYAKDNEILDLF--WSHVVDRGL 577
             + ++     + +  +S  +   + D    ++H+VD G+
Sbjct: 359 QNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGV 398



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 61/220 (27%), Positives = 99/220 (45%), Gaps = 10/220 (4%)

Query: 370 APDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKE 429
           AP   T N LI+ Y ++     A+ V  R+L  GL  D  +Y  LI GF K  E+D A E
Sbjct: 119 APTIYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYE 178

Query: 430 LLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFC 489
           L + M++   SP   +Y+ L+DG C         ++L++ V  G+  +   Y +LI  + 
Sbjct: 179 LFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYS 238

Query: 490 KKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLK 549
                  + R+F  M  +G++   V   S  +A  R    K   DI D M  +     + 
Sbjct: 239 TAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNII 298

Query: 550 IYRSFSASYAKD------NEILDLFWSHVVDRGLMSKHIF 583
            Y +    YA +      N +++L    +V +G++  H F
Sbjct: 299 SYSTLLHGYAAEGCFANMNSLVNL----MVSKGIVPNHRF 334


>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
          Length = 455

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 108/328 (32%), Positives = 175/328 (53%), Gaps = 3/328 (0%)

Query: 195 GVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFK-DVRADLFTYNTLIALYCKKGMHYE 253
           G+  N + Y  +I   CK   VD+  K+  EM  K +V+ +   YN LI  YC +G    
Sbjct: 103 GIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDT 162

Query: 254 ALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLID 311
           AL  +DRM   G++  + TYN L+H    +GR  EA  L  ++  KG  P+  TY  LI+
Sbjct: 163 ALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILIN 222

Query: 312 GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAP 371
           G+C+  ++++AL + E M+ +GV   VVTY S++  L K+G++++ ++L +E   + I P
Sbjct: 223 GHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRP 282

Query: 372 DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
           D V  N LIN++   G+   A ++   M +  +  D  TY  L+ G C    +D A++L+
Sbjct: 283 DLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLI 342

Query: 432 FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
             M   G  P   +Y+ L+ GY  K + +  L++ +E +++G    +  Y ALI+  CK 
Sbjct: 343 DEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKN 402

Query: 492 EKVDYAQRLFNLMQGNGILGDSVIYTSL 519
            + D A+ +   M  NGI  D   Y SL
Sbjct: 403 GQGDDAENMVKEMVENGITPDDSTYISL 430



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 101/332 (30%), Positives = 175/332 (52%), Gaps = 3/332 (0%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHN-LMPHLHACTVLLNSLAKDRLTDMVWKV 187
           N +    ++  +  +    + ++VFD+M     + P       L+         D     
Sbjct: 107 NQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLY 166

Query: 188 YKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCK 247
             +MV+ GV   +  YN+L+HA        +  +L+ EM  K +  D+FTYN LI  +CK
Sbjct: 167 RDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCK 226

Query: 248 KGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVT 305
           +G   +AL + + M R G+   +VTY SLI+   ++G+++E  +LF +   +G  P+ V 
Sbjct: 227 EGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVL 286

Query: 306 YTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMN 365
           Y  LI+ +  + +++ A  +   M  K + P  VTYN+++R LC  GR+ +A +L++EM 
Sbjct: 287 YNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMT 346

Query: 366 EKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMD 425
           ++ I PD VT NTLI+ Y   GD   A++++N M+  G      TY ALI G CK  + D
Sbjct: 347 KRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGD 406

Query: 426 IAKELLFGMLDAGFSPSYCSYSWLVDGYCNKN 457
            A+ ++  M++ G +P   +Y  L++G   ++
Sbjct: 407 DAENMVKEMVENGITPDDSTYISLIEGLTTED 438



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 114/383 (29%), Positives = 187/383 (48%), Gaps = 8/383 (2%)

Query: 185 WKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIAL 244
           + ++  M +L +      +N+++   C +    +  +LL +M     R +  TYNT+IA 
Sbjct: 26  FALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIAG 81

Query: 245 YCKKGMHYEALAVQDRM-EREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGAT- 300
           +C +G    AL +   M ER GI+P+  TY ++I G+C+ GR+ EA ++F ++  KG   
Sbjct: 82  FCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVK 141

Query: 301 PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRL 360
           P  V Y  LI GYC    L+ AL  R+ M  +GV   V TYN ++  L  +GR  +A  L
Sbjct: 142 PEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYEL 201

Query: 361 LNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCK 420
           + EM  K +APD  T N LIN +CK G+   A+++   M   G+     TY +LI+   K
Sbjct: 202 VEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSK 261

Query: 421 AKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSV 480
             ++    +L    +  G  P    Y+ L++ +    N +   +++ E   + +  D   
Sbjct: 262 KGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVT 321

Query: 481 YRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMY 540
           Y  L+R  C   +VD A++L + M   GI  D V Y +L   Y   G+ K    I ++M 
Sbjct: 322 YNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMM 381

Query: 541 RRRLMITLKIYRSFSASYAKDNE 563
            +    TL  Y +      K+ +
Sbjct: 382 NKGFNPTLLTYNALIQGLCKNGQ 404



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 99/334 (29%), Positives = 160/334 (47%), Gaps = 8/334 (2%)

Query: 237 TYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI 296
           T+N ++   C  G    AL +  +M R    P+ VTYN++I GFC  GR++ A  + R++
Sbjct: 43  TFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREM 98

Query: 297 K---GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKG-VYPGVVTYNSILRKLCKEG 352
           +   G  PN  TY T+I G+C+   ++EA+++ + M  KG V P  V YN+++   C +G
Sbjct: 99  RERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQG 158

Query: 353 RIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYK 412
           ++  A    + M E+ +A    T N L++A    G    A ++   M   GL  D FTY 
Sbjct: 159 KLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYN 218

Query: 413 ALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSR 472
            LI+G CK   +  A E+   M   G   +  +Y+ L+     K   +   KL DE V R
Sbjct: 219 ILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRR 278

Query: 473 GLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKAC 532
           G+  D+ +Y ALI        +D A  +   M+   I  D V Y +L       G     
Sbjct: 279 GIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEA 338

Query: 533 SDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
             ++D+M +R +   L  Y +  + Y+   ++ D
Sbjct: 339 RKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKD 372



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 87/264 (32%), Positives = 136/264 (51%), Gaps = 2/264 (0%)

Query: 170 VLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFK 229
           +L+++L  D      +++ ++M   G+  ++  YN+LI+  CK  +V K  ++   M  +
Sbjct: 184 LLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRR 243

Query: 230 DVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA 289
            VRA + TY +LI    KKG   E   + D   R GI PD+V YN+LI+     G +  A
Sbjct: 244 GVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRA 303

Query: 290 RRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRK 347
             +  ++  K   P+ VTY TL+ G C    ++EA +L + M  +G+ P +VTYN+++  
Sbjct: 304 FEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISG 363

Query: 348 LCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLD 407
              +G ++DA R+ NEM  K   P  +T N LI   CK G    A  +   M+E G+  D
Sbjct: 364 YSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPD 423

Query: 408 QFTYKALIHGFCKAKEMDIAKELL 431
             TY +LI G     E  I  E L
Sbjct: 424 DSTYISLIEGLTTEDERAIDDERL 447



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/209 (23%), Positives = 82/209 (39%), Gaps = 17/209 (8%)

Query: 75  KHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLS 134
           + ++ ++ ++I+ L+K    +    + ++   R       + NAL+        NSH  S
Sbjct: 246 RATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALI--------NSHSTS 297

Query: 135 WLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQL 194
             +             ++  +M    + P       L+  L      D   K+  +M + 
Sbjct: 298 GNI---------DRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKR 348

Query: 195 GVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEA 254
           G+  ++  YN LI       DV    ++  EM  K     L TYN LI   CK G   +A
Sbjct: 349 GIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDA 408

Query: 255 LAVQDRMEREGISPDIVTYNSLIHGFCRE 283
             +   M   GI+PD  TY SLI G   E
Sbjct: 409 ENMVKEMVENGITPDDSTYISLIEGLTTE 437


>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
 gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
          Length = 448

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 109/362 (30%), Positives = 184/362 (50%), Gaps = 3/362 (0%)

Query: 169 TVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEF 228
           + L+N   K R     +++  +M + G+V +  +YN +I   C +  VD       +M+ 
Sbjct: 37  STLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQ- 95

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
           +     + TY  L+   CK     +A  + + M   G +P++VTYN+LI+GFC+ G M E
Sbjct: 96  RHCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDE 155

Query: 289 ARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILR 346
           A  LF  +     +P+  TY  LIDGYC+    ++  +L + M   G  P  +TYN+++ 
Sbjct: 156 AVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMD 215

Query: 347 KLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLML 406
            L K G+  DA  L   M  +   P + T N +I+ +CK+G    A ++   M + G + 
Sbjct: 216 SLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLP 275

Query: 407 DQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLL 466
           D +TY  +I G C+A  +D A++LL  M +AG  P   +Y+ +V G C  +  +   ++ 
Sbjct: 276 DIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVY 335

Query: 467 DEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRA 526
           +   + G  +DV     LI   CK  ++D A++L   M+ NG   D V YT L + + +A
Sbjct: 336 EVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKA 395

Query: 527 GE 528
            +
Sbjct: 396 DQ 397



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 115/421 (27%), Positives = 190/421 (45%), Gaps = 40/421 (9%)

Query: 126 PDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVW 185
           PD  ++  S L+  +   +  Q   ++ D+M    ++PH      ++  L  +   D   
Sbjct: 31  PDSITY--STLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSAL 88

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
             Y+ M Q     ++  Y +L+ A CKS+ +     +L +M       ++ TYNTLI  +
Sbjct: 89  VHYRDM-QRHCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGF 147

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNH 303
           CK G   EA+ + ++M     SPD+ TYN LI G+C++ R ++  +L +++   G  PN 
Sbjct: 148 CKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNF 207

Query: 304 VTYTTL-----------------------------------IDGYCRANDLEEALRLREV 328
           +TY TL                                   ID +C+   L+ A  L ++
Sbjct: 208 ITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQL 267

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M  +G  P + TYN ++   C+  RI DA +LL  M E    PD VT N++++  CK   
Sbjct: 268 MTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQ 327

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
              A +V   +   G  LD  T   LI G CK++ +D A++LL  M   G +P   +Y+ 
Sbjct: 328 VDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTI 387

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG 508
           L+ G+C  +  +  L    E + +G    V  Y  +I + CK  +V     L   M   G
Sbjct: 388 LIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERG 447

Query: 509 I 509
           +
Sbjct: 448 V 448



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/227 (25%), Positives = 98/227 (43%), Gaps = 1/227 (0%)

Query: 342 NSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLE 401
           N +L    ++ + ++A  L         +PD++T +TLIN +CK  D   A ++ + M +
Sbjct: 2   NCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 61

Query: 402 AGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEA 461
            G++     Y  +I G C    +D A  + +  +    +PS  +Y+ LVD  C       
Sbjct: 62  RGIVPHNAVYNTIIKGLCDNGRVDSAL-VHYRDMQRHCAPSVITYTILVDALCKSARISD 120

Query: 462 LLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAY 521
              +L++ +  G   +V  Y  LI  FCK   +D A  LFN M  N    D   Y  L  
Sbjct: 121 ASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILID 180

Query: 522 AYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLF 568
            Y +   P+  + +L +M +         Y +   S  K  + +D F
Sbjct: 181 GYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAF 227


>gi|255569207|ref|XP_002525572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223535151|gb|EEF36831.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 687

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 140/578 (24%), Positives = 257/578 (44%), Gaps = 47/578 (8%)

Query: 26  WAKLLNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMI 85
           W+   +    + L+  ++  VL +L+      + +  FF+ ++      +H+++S   +I
Sbjct: 75  WSLGCSTRFITDLSQVSVLGVLNDLFGESFNAAFALYFFRLSQ-CCSGLEHTIRSLCRLI 133

Query: 86  HILTKNKHFKSAQNMLEKIA--LRDFLSTPSVLNALVK-IHDDPDGNSH---VLSWLVIF 139
           HIL   K      +++  +   +   +    + + L K ++D   G      V S LV  
Sbjct: 134 HILVYGKRNYRVMDLILFLVRNIGGAVGEEELCDLLFKLVYDTGFGTKDLETVYSMLVDC 193

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
           Y         L +  ++++ N+ P +  C  LL +L +    D+ W + + M   G+  N
Sbjct: 194 YVTESKVSLALNLIHEIKLLNIFPSMGVCNSLLKALLRSHQLDLAWDILEGMQSFGMHLN 253

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLI-AL-------------- 244
             + ++ I + C   ++    K+L EM+   ++AD+  Y  +I AL              
Sbjct: 254 ASILSLFIESYCAEGNIQSGWKILMEMKNYGIKADVIAYTIVIDALCKISCVKVATSLLF 313

Query: 245 --------------------YCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREG 284
                               YCKKG   +A+ + +      + P+I  Y+S +   C++G
Sbjct: 314 KMIHCGISVDSVSVSSVIDGYCKKGRSDKAINLLNFFN---VRPNIFVYSSFMTKLCKDG 370

Query: 285 RMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYN 342
            M EA + F+++   G  P+   YT +I GYC+  D+ +A +    M   G+ P V TY 
Sbjct: 371 NMLEASKTFQEMSEFGLYPDCFCYTIIIGGYCKVGDINKAFQYLGEMLKFGITPSVTTYT 430

Query: 343 SILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEA 402
            ++   CK G +  A  LL  M  + + PD VT N LI+ + K G    A ++ + M  A
Sbjct: 431 LLINACCKSGDMAMAEYLLQRMMLEGLIPDVVTFNCLIDGFGKKGYLQKAFELLDIMRSA 490

Query: 403 GLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEAL 462
           G+  D  TY ALIH        + AK++L  ++  G SP   +++ ++DG+  K N E  
Sbjct: 491 GMSPDTVTYNALIHSLIARGYPNEAKDILHELIRRGLSPDVMTFTDVIDGFSKKGNFEEA 550

Query: 463 LKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYA 522
             +      R +  DV    AL+  +C+  ++D A  LF  M   G+  D V+Y +L + 
Sbjct: 551 FLVWSYMSERHVKPDVVTCSALLNGYCRARRMDEANALFLKMLDAGLKPDLVLYNNLIHG 610

Query: 523 YWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAK 560
           +  AG   A  +++  M     +  +  +R+F+  + K
Sbjct: 611 FCSAGNMNAACNLVAMMIDDGFLPNITTHRAFALGFEK 648



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 118/447 (26%), Positives = 203/447 (45%), Gaps = 52/447 (11%)

Query: 97  AQNMLEKIALRDFLSTPSVLNALVKI----------HDDPDG--------NSHVLSWLVI 138
           A N++ +I L +   +  V N+L+K            D  +G        N+ +LS  + 
Sbjct: 203 ALNLIHEIKLLNIFPSMGVCNSLLKALLRSHQLDLAWDILEGMQSFGMHLNASILSLFIE 262

Query: 139 FYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG--- 195
            Y      Q G ++  +M+ + +   + A T+++++L K     +   +  KM+  G   
Sbjct: 263 SYCAEGNIQSGWKILMEMKNYGIKADVIAYTIVIDALCKISCVKVATSLLFKMIHCGISV 322

Query: 196 -----------------------------VVANIHLYNVLIHACCKSSDVDKVEKLLCEM 226
                                        V  NI +Y+  +   CK  ++ +  K   EM
Sbjct: 323 DSVSVSSVIDGYCKKGRSDKAINLLNFFNVRPNIFVYSSFMTKLCKDGNMLEASKTFQEM 382

Query: 227 EFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRM 286
               +  D F Y  +I  YCK G   +A      M + GI+P + TY  LI+  C+ G M
Sbjct: 383 SEFGLYPDCFCYTIIIGGYCKVGDINKAFQYLGEMLKFGITPSVTTYTLLINACCKSGDM 442

Query: 287 REARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSI 344
             A  L +   ++G  P+ VT+  LIDG+ +   L++A  L ++M + G+ P  VTYN++
Sbjct: 443 AMAEYLLQRMMLEGLIPDVVTFNCLIDGFGKKGYLQKAFELLDIMRSAGMSPDTVTYNAL 502

Query: 345 LRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGL 404
           +  L   G   +A  +L+E+  + ++PD +T   +I+ + K G+   A  V + M E  +
Sbjct: 503 IHSLIARGYPNEAKDILHELIRRGLSPDVMTFTDVIDGFSKKGNFEEAFLVWSYMSERHV 562

Query: 405 MLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLK 464
             D  T  AL++G+C+A+ MD A  L   MLDAG  P    Y+ L+ G+C+  N  A   
Sbjct: 563 KPDVVTCSALLNGYCRARRMDEANALFLKMLDAGLKPDLVLYNNLIHGFCSAGNMNAACN 622

Query: 465 LLDEFVSRGLCVDVSVYRALIRRFCKK 491
           L+   +  G   +++ +RA    F KK
Sbjct: 623 LVAMMIDDGFLPNITTHRAFALGFEKK 649



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 102/408 (25%), Positives = 187/408 (45%), Gaps = 10/408 (2%)

Query: 173 NSLAKDRLTDMVWK-VYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDV 231
            ++ ++ L D+++K VY      G      +Y++L+      S V     L+ E++  ++
Sbjct: 158 GAVGEEELCDLLFKLVYD--TGFGTKDLETVYSMLVDCYVTESKVSLALNLIHEIKLLNI 215

Query: 232 RADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARR 291
              +   N+L+    +      A  + + M+  G+  +    +  I  +C EG ++   +
Sbjct: 216 FPSMGVCNSLLKALLRSHQLDLAWDILEGMQSFGMHLNASILSLFIESYCAEGNIQSGWK 275

Query: 292 LFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLC 349
           +  ++K  G   + + YT +ID  C+ + ++ A  L   M   G+    V+ +S++   C
Sbjct: 276 ILMEMKNYGIKADVIAYTIVIDALCKISCVKVATSLLFKMIHCGISVDSVSVSSVIDGYC 335

Query: 350 KEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQF 409
           K+GR   A  LLN  N   + P+    ++ +   CK G+   A K    M E GL  D F
Sbjct: 336 KKGRSDKAINLLNFFN---VRPNIFVYSSFMTKLCKDGNMLEASKTFQEMSEFGLYPDCF 392

Query: 410 TYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEF 469
            Y  +I G+CK  +++ A + L  ML  G +PS  +Y+ L++  C   +      LL   
Sbjct: 393 CYTIIIGGYCKVGDINKAFQYLGEMLKFGITPSVTTYTLLINACCKSGDMAMAEYLLQRM 452

Query: 470 VSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEP 529
           +  GL  DV  +  LI  F KK  +  A  L ++M+  G+  D+V Y +L ++    G P
Sbjct: 453 MLEGLIPDVVTFNCLIDGFGKKGYLQKAFELLDIMRSAGMSPDTVTYNALIHSLIARGYP 512

Query: 530 KACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLF--WSHVVDR 575
               DIL ++ RR L   +  +      ++K     + F  WS++ +R
Sbjct: 513 NEAKDILHELIRRGLSPDVMTFTDVIDGFSKKGNFEEAFLVWSYMSER 560


>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 894

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 148/576 (25%), Positives = 260/576 (45%), Gaps = 31/576 (5%)

Query: 17  ISAIMLKGHWAKLLNPNIASSLTS-TAIHKVLLNLYNCCHI-PSLSCAFFKWAESAVPNY 74
           I  I+L+  W K  NP+  + + S T  H  L +L+N  ++ P  +  FFKW       +
Sbjct: 45  IFTILLQPQWRK--NPSFNTLIPSLTPTH--LSSLFNNPNLHPLTALNFFKWIHYQ-HGF 99

Query: 75  KHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS---VLNALVKIHDDPDGNSH 131
            H++ S+  ++ IL +N   ++A+N+   + ++  +S+     VLN L           H
Sbjct: 100 IHTVHSYQPLLFILVRNGFLRAAENVRNSM-IKSCVSSHEARFVLNLLTH---------H 149

Query: 132 VLSWLVIFYANLKMTQDGLQVFDQMRV-------HNLMPHLHACTVLLNSLAKDRLTDMV 184
             S  V  Y  L M      + D++           + P+L +   ++N+  K     + 
Sbjct: 150 EFSLSVTSYNRLFMVLSRFGLIDELNCLFKDMLNDGVEPNLISFNTMVNAHCKIGNVVVA 209

Query: 185 WKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIAL 244
              +  +++ G   +   Y  LI   CK  ++    K+   M  +    +  +Y  LI  
Sbjct: 210 KAYFCGLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHG 269

Query: 245 YCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPN 302
           +C+ G   EAL +  +M+ +G  PD+ TY  L+  FC  G+  EA + F ++   G  PN
Sbjct: 270 FCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPN 329

Query: 303 HVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLN 362
             TYT LID +C+   ++E + +   M  KG+   VV +N+++   CK G + DA  +L+
Sbjct: 330 VYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLD 389

Query: 363 EMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAK 422
            M   K+ P++ T N LI  +C+      AM + N+M E  L  +  TY  LIHG CKA+
Sbjct: 390 SMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKAR 449

Query: 423 EMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYR 482
            +D A  L   M+  GF P   ++   +D  C     E   ++ +    +    +  +Y 
Sbjct: 450 VVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYT 509

Query: 483 ALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRR 542
           ALI  +CK EK   A  LF  M   G   +S+ +  L     + G+ +    ++D M + 
Sbjct: 510 ALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKF 569

Query: 543 RLMITLKIYRSFSASYAKDNEI--LDLFWSHVVDRG 576
               T+  Y        ++++    ++F   ++  G
Sbjct: 570 DAKPTVHTYTILIEEILRESDFDRANMFLDQMISSG 605



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 118/397 (29%), Positives = 200/397 (50%), Gaps = 6/397 (1%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           + L++F QM+     P +   TVL+ +  +        K +++MV+ G+  N++ Y VLI
Sbjct: 278 EALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLI 337

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
              CK   +D+  ++L  M  K + + +  +N LI  YCK+GM  +A+ V D M+   + 
Sbjct: 338 DYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVC 397

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
           P+  TYN LI GFCR+  M  A  L   +     +PN VTY TLI G C+A  ++ A RL
Sbjct: 398 PNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRL 457

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
             +M   G  P   T+ + +  LCK G++  A+++   + EK    +      LI+ YCK
Sbjct: 458 HHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCK 517

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL--LFGMLDAGFSPSY 443
               + A  +  RML  G   +  T+  L+ G  K  +++ A  L  + G  DA   P+ 
Sbjct: 518 AEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDA--KPTV 575

Query: 444 CSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNL 503
            +Y+ L++    +++ +     LD+ +S G   +V  Y A I+ +C++ ++  A+ +   
Sbjct: 576 HTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVK 635

Query: 504 MQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMY 540
           ++  GIL DS IY  L  AY   G+  +   +L  M+
Sbjct: 636 IKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMF 672



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 134/525 (25%), Positives = 228/525 (43%), Gaps = 100/525 (19%)

Query: 126 PDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVW 185
           PD  ++ +  LV  +  +    + L+ F++M  + + P+++  TVL++   K    D   
Sbjct: 293 PDVPTYTV--LVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGM 350

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
           ++   M++ G+V+++  +N LI   CK   ++    +L  M+   V  +  TYN LI  +
Sbjct: 351 EMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGF 410

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCRE---------------------- 283
           C+K     A+A+ ++M    +SP++VTYN+LIHG C+                       
Sbjct: 411 CRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQ 470

Query: 284 -------------GRMREARRLFRDIKG--ATPNHVTYTTLIDGYCRANDLEEALRLREV 328
                        G++ +A ++F  +K   A  N   YT LIDGYC+A    +A  L + 
Sbjct: 471 RTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKR 530

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDA------------------------------- 357
           M  +G +P  +T+N +L  L KEG++ DA                               
Sbjct: 531 MLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESD 590

Query: 358 ----NRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKA 413
               N  L++M      P+ VT    I AYC+ G    A ++  ++ E G++LD F Y  
Sbjct: 591 FDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDV 650

Query: 414 LIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYC-NKNNEEAL---------- 462
           L++ +    ++D A  +L  M D G  PS  +YS L+      K N+E +          
Sbjct: 651 LVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNIS 710

Query: 463 ---------------LKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGN 507
                            L ++ V +G   +V+ Y  LI+  CK E +  A RLFN M+ +
Sbjct: 711 VDNANIWKIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKES 770

Query: 508 GILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYR 552
           GI     I+ SL  +  + G  +    +LD M     +  L+ Y+
Sbjct: 771 GISPSENIHNSLLSSCCKLGMHEEALRLLDSMMEYNHLAHLESYK 815



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 115/477 (24%), Positives = 198/477 (41%), Gaps = 65/477 (13%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           NS   + L+  +   K     + + ++M  + L P+L     L++ L K R+ D  W+++
Sbjct: 399 NSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLH 458

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
             M++ G V +   +   I   CK   V++  ++   ++ K   A+ F Y  LI  YCK 
Sbjct: 459 HLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKA 518

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKG---ATPNHVT 305
               +A  +  RM  EG  P+ +T+N L+ G  +EG++ +A  L  D+ G   A P   T
Sbjct: 519 EKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLV-DVMGKFDAKPTVHT 577

Query: 306 YTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE-------------- 351
           YT LI+   R +D + A    + M + G  P VVTY + ++  C++              
Sbjct: 578 YTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIK 637

Query: 352 ---------------------GRIRDANRLLNEMNEKKIAPDNVTCNTLI-----NAYCK 385
                                G++  A  +L  M +    P   T + L+       Y K
Sbjct: 638 EEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNK 697

Query: 386 IG------------DTASAMKVKN---------RMLEAGLMLDQFTYKALIHGFCKAKEM 424
            G            D A+  K+ +         +M+E G + +  TY  LI G CK + +
Sbjct: 698 EGMGLDLNSTNISVDNANIWKIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHL 757

Query: 425 DIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRAL 484
            +A  L   M ++G SPS   ++ L+   C     E  L+LLD  +       +  Y+ L
Sbjct: 758 SLAFRLFNHMKESGISPSENIHNSLLSSCCKLGMHEEALRLLDSMMEYNHLAHLESYKLL 817

Query: 485 IRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
           +    ++   + A+ +F  +   G   D V++  L     R G    CS + D M +
Sbjct: 818 VCGLFEQGNQEKAEEIFRSLLSCGYNYDEVVWKVLLDGLVRKGYVDECSQLRDIMEK 874


>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
 gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
          Length = 436

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 121/421 (28%), Positives = 197/421 (46%), Gaps = 38/421 (9%)

Query: 156 MRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSD 215
           M +  ++P       + +  AK    + V +VY+ MV+ G       Y +LI   CK  +
Sbjct: 1   MALRRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGN 60

Query: 216 VDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNS 275
            D+  KLL  M  K  +     Y+T+I   CK     EA  + ++M R    PD +TY  
Sbjct: 61  FDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYA-PPDALTYGP 119

Query: 276 LIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKG 333
           ++   C+  R+ +A     ++  +G  P+   Y  ++ G C+   +EEA  L E M  + 
Sbjct: 120 IVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQR 179

Query: 334 VYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAM 393
           + P VVTYN+++  LCK  RI  A  L  EM  K   P  V+ NTLI+ +CK  D  +A 
Sbjct: 180 INPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAK 239

Query: 394 KVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGY 453
            V ++M+ +  + +  TY  LI G  K+ ++  A E+L GM+  G +P+  +YS L+DG+
Sbjct: 240 DVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGF 299

Query: 454 CNKNNEEALLKLLDEFVSRG--------------LC---------------------VDV 478
           C     +   KLL++ V++G              LC                       V
Sbjct: 300 CKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTV 359

Query: 479 SVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDD 538
             Y  L+R  C  +++D A RL+  M   G   D++ Y +LA+   RAG+     ++++ 
Sbjct: 360 VTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEK 419

Query: 539 M 539
           M
Sbjct: 420 M 420



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/363 (29%), Positives = 177/363 (48%), Gaps = 20/363 (5%)

Query: 74  YKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVL 133
           +K    ++ T+I+ L K    + A+ ++EK+A                 +  PD  ++  
Sbjct: 76  FKRKAIAYSTIINWLCKLNRVEEARELIEKMAR----------------YAPPDALTY-- 117

Query: 134 SWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQ 193
             +V      K   D L   ++M    + P       +L+ L ++   +    +++KMV+
Sbjct: 118 GPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVK 177

Query: 194 LGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYE 253
             +  N+  YN LI+  CK+  ++   +L  EM  K       +YNTLI  +CKK     
Sbjct: 178 QRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVA 237

Query: 254 ALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLID 311
           A  V D+M R    P++VTY +LI G  + G+++ A  +   +  KG TPN  TY+ LID
Sbjct: 238 AKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLID 297

Query: 312 GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAP 371
           G+C+   ++EA +L E M  +G+ P VVTYN +L  LC+  ++ DA +L   M +++  P
Sbjct: 298 GFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHP 357

Query: 372 DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
             VT NTL+ A C       A ++   M+  G   D  TY  L  G  +A ++  A+EL+
Sbjct: 358 TVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELM 417

Query: 432 FGM 434
             M
Sbjct: 418 EKM 420



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 98/360 (27%), Positives = 182/360 (50%), Gaps = 3/360 (0%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           +  ++   MR+        A + ++N L K    +   ++ +KM +     +   Y  ++
Sbjct: 63  EAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYAP-PDALTYGPIV 121

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
              CK+  +D     + EM  + ++ D F YN +++  C++    EA  + ++M ++ I+
Sbjct: 122 ERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRIN 181

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
           P++VTYN+LI+G C+  R+  A  LF+++  KG  P  V+Y TLIDG+C+  DL  A  +
Sbjct: 182 PNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDV 241

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
            + M      P VVTY +++  L K G+++ A  +L+ M +K + P+  T + LI+ +CK
Sbjct: 242 FDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCK 301

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
           +     A K+  +M+  G+     TY  L++  C+A +++ A +L  GM      P+  +
Sbjct: 302 VRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVT 361

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+ L+   C+    +   +L  E +++G   D   Y  L     +  KV  AQ L   M+
Sbjct: 362 YNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMK 421



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 101/366 (27%), Positives = 157/366 (42%), Gaps = 38/366 (10%)

Query: 226 MEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGR 285
           M  + V     T+NT+   + K G   +   V   M   G +     Y  LI   C+ G 
Sbjct: 1   MALRRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGN 60

Query: 286 MREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNS 343
             EA +L     +K      + Y+T+I+  C+ N +EEA  L E MA +   P  +TY  
Sbjct: 61  FDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMA-RYAPPDALTYGP 119

Query: 344 ILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAG 403
           I+ +LCK  RI DA   + EM  + I PD    N +++  C+      A  +  +M++  
Sbjct: 120 IVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQR 179

Query: 404 LMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNN----- 458
           +  +  TY  LI+G CKA  ++ A EL   M   G+ P+  SY+ L+DG+C K +     
Sbjct: 180 INPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAK 239

Query: 459 ------------------------------EEALLKLLDEFVSRGLCVDVSVYRALIRRF 488
                                          +A  ++LD  V +G+  +V+ Y  LI  F
Sbjct: 240 DVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGF 299

Query: 489 CKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITL 548
           CK  +VD A +L   M   GI    V Y  L  +  RA + +    +   M +RR   T+
Sbjct: 300 CKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTV 359

Query: 549 KIYRSF 554
             Y + 
Sbjct: 360 VTYNTL 365



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 113/227 (49%), Gaps = 2/227 (0%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           +   ++F +M     +P   +   L++   K +       V+ KMV+   V N+  Y  L
Sbjct: 201 ETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTL 260

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           I    KS  V    ++L  M  K V  ++ TY+ LI  +CK     EA  + ++M  +GI
Sbjct: 261 IDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGI 320

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
           +P +VTYN L++  CR  ++ +A +LFR +  +   P  VTY TL+   C    L+ A R
Sbjct: 321 APTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHR 380

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAP 371
           L   M AKG  P  +TY+++   L + G++ +A  L+ +M   K  P
Sbjct: 381 LYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLTKRNP 427



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 66/272 (24%), Positives = 119/272 (43%), Gaps = 34/272 (12%)

Query: 30  LNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILT 89
           +NPN+ +       +  L+N    C    +  A+  + E A   Y  +  S+ T+I    
Sbjct: 180 INPNVVT-------YNTLIN--GLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFC 230

Query: 90  KNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDG 149
           K K   +A+++ +K+   +    P+V+     I    DG S                Q  
Sbjct: 231 KKKDLVAAKDVFDKMVRSN--CVPNVVTYTTLI----DGLSKS-----------GKVQAA 273

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
            +V D M    + P++   + L++   K R  D   K+ ++MV  G+   +  YN+L+++
Sbjct: 274 AEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNS 333

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMERE----G 265
            C++  ++   KL   M  +     + TYNTL+   C    H++ L    R+  E    G
Sbjct: 334 LCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALC----HHKQLDGAHRLYAEMIAKG 389

Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRDIK 297
             PD +TY++L  G  R G++ EA+ L   +K
Sbjct: 390 CPPDAITYDTLAWGLTRAGKVHEAQELMEKMK 421


>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
           restorer; AltName: Full=Protein PPR; AltName:
           Full=Restorer for CMS; Flags: Precursor
 gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
 gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
 gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
 gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
 gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
          Length = 791

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 130/462 (28%), Positives = 214/462 (46%), Gaps = 53/462 (11%)

Query: 167 ACTVLLNSLAKD-RLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC-------------- 211
           A T LL  L  D R +D +  V ++M +LG + N+  YN+L+   C              
Sbjct: 124 AFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHM 183

Query: 212 ------------------------KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCK 247
                                   K  D DK      EM  + +  D+ TYN++IA  CK
Sbjct: 184 MADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCK 243

Query: 248 KGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVT 305
                +A+ V + M + G+ PD +TYNS++HG+C  G+ +EA    + ++  G  P+ VT
Sbjct: 244 AQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVT 303

Query: 306 YTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMN 365
           Y+ L+D  C+     EA ++ + M  +G+ P + TY ++L+    +G + + + LL+ M 
Sbjct: 304 YSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMV 363

Query: 366 EKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMD 425
              I PD+   + LI AY K G    AM V ++M + GL  +  TY A+I   CK+  ++
Sbjct: 364 RNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVE 423

Query: 426 IAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
            A      M+D G SP    Y+ L+ G C  N  E   +L+ E + RG+C++   + ++I
Sbjct: 424 DAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSII 483

Query: 486 RRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
              CK+ +V  +++LF LM   G+  + + Y +L   Y  AG+      +L  M    L 
Sbjct: 484 DSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLK 543

Query: 546 ITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKEMQ 587
                Y +    Y K + + D               +FKEM+
Sbjct: 544 PNTVTYSTLINGYCKISRMEDALV------------LFKEME 573



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 118/446 (26%), Positives = 207/446 (46%), Gaps = 40/446 (8%)

Query: 146 TQDGLQVFDQM---RVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHL 202
           +Q+ L++   M   R     P + + T ++N   K+  +D  +  Y +M+  G++ ++  
Sbjct: 174 SQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVT 233

Query: 203 YNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRME 262
           YN +I A CK+  +DK  ++L  M    V  D  TYN+++  YC  G   EA+    +M 
Sbjct: 234 YNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMR 293

Query: 263 REGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLE 320
            +G+ PD+VTY+ L+   C+ GR  EAR++F  +  +G  P   TY TL+ GY     L 
Sbjct: 294 SDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALV 353

Query: 321 EALRLREVMAAKGVYP-----------------------------------GVVTYNSIL 345
           E   L ++M   G++P                                     VTY +++
Sbjct: 354 EMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVI 413

Query: 346 RKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLM 405
             LCK GR+ DA     +M ++ ++P N+  N+LI+  C       A ++   ML+ G+ 
Sbjct: 414 GILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGIC 473

Query: 406 LDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKL 465
           L+   + ++I   CK   +  +++L   M+  G  P+  +Y+ L++GYC     +  +KL
Sbjct: 474 LNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKL 533

Query: 466 LDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWR 525
           L   VS GL  +   Y  LI  +CK  +++ A  LF  M+ +G+  D + Y  +    ++
Sbjct: 534 LSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQ 593

Query: 526 AGEPKACSDILDDMYRRRLMITLKIY 551
                A  ++   +      I L  Y
Sbjct: 594 TRRTAAAKELYVRITESGTQIELSTY 619



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 120/448 (26%), Positives = 211/448 (47%), Gaps = 19/448 (4%)

Query: 62  AFFKWAES--AVPNYKHSLQSHWTMIHILTKNKHFKS---AQNMLEKIALRDFLSTPSVL 116
            FFK  +S  A   Y H +     +  ++T N    +   AQ M + +          VL
Sbjct: 205 GFFKEGDSDKAYSTY-HEMLDRGILPDVVTYNSIIAALCKAQAMDKAM---------EVL 254

Query: 117 NALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLA 176
           N +VK    PD  ++  + ++  Y +    ++ +    +MR   + P +   ++L++ L 
Sbjct: 255 NTMVKNGVMPDCMTY--NSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLC 312

Query: 177 KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLF 236
           K+       K++  M + G+   I  Y  L+        + ++  LL  M    +  D +
Sbjct: 313 KNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHY 372

Query: 237 TYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI 296
            ++ LI  Y K+G   +A+ V  +M ++G++P+ VTY ++I   C+ GR+ +A   F  +
Sbjct: 373 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQM 432

Query: 297 --KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRI 354
             +G +P ++ Y +LI G C  N  E A  L   M  +G+    + +NSI+   CKEGR+
Sbjct: 433 IDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRV 492

Query: 355 RDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKAL 414
            ++ +L   M    + P+ +T NTLIN YC  G    AMK+ + M+  GL  +  TY  L
Sbjct: 493 IESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTL 552

Query: 415 IHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGL 474
           I+G+CK   M+ A  L   M  +G SP   +Y+ ++ G        A  +L       G 
Sbjct: 553 INGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGT 612

Query: 475 CVDVSVYRALIRRFCKKEKVDYAQRLFN 502
            +++S Y  ++   CK +  D A ++F 
Sbjct: 613 QIELSTYNIILHGLCKNKLTDDALQMFQ 640



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 108/393 (27%), Positives = 193/393 (49%), Gaps = 4/393 (1%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
            +L+ +V+    PD   +V S L+  YA        + VF +MR   L P+      ++ 
Sbjct: 357 GLLDLMVRNGIHPD--HYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIG 414

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
            L K    +     +++M+  G+     +YN LIH  C  +  ++ E+L+ EM  + +  
Sbjct: 415 ILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICL 474

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           +   +N++I  +CK+G   E+  + + M R G+ P+++TYN+LI+G+C  G+M EA +L 
Sbjct: 475 NTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLL 534

Query: 294 RDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
             +   G  PN VTY+TLI+GYC+ + +E+AL L + M + GV P ++TYN IL+ L + 
Sbjct: 535 SGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQT 594

Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
            R   A  L   + E     +  T N +++  CK   T  A+++   +    L L+  T+
Sbjct: 595 RRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTF 654

Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
             +I    K    D AK+L       G  P+Y +Y  + +    +   E L +L      
Sbjct: 655 NIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMED 714

Query: 472 RGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
            G  VD  +   ++R   ++ ++  A    +++
Sbjct: 715 NGCTVDSGMLNFIVRELLQRGEITRAGTYLSMI 747



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 112/390 (28%), Positives = 184/390 (47%), Gaps = 10/390 (2%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG---VVANIHLY 203
           +D   VFD++        ++     L  +A+D     V + Y +M + G   V  ++  Y
Sbjct: 32  EDARHVFDELLRRGRGASIYGLNRALADVARDSPAAAVSR-YNRMARAGADEVTPDLCTY 90

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL-AVQDRME 262
            +LI  CC++  +D     L  +  K  R D   +  L+   C      +A+  V  RM 
Sbjct: 91  GILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 150

Query: 263 REGISPDIVTYNSLIHGFCREGRMREARRLFRDIK-----GATPNHVTYTTLIDGYCRAN 317
             G  P++ +YN L+ G C E R +EA  L   +      G+ P+ V+YTT+I+G+ +  
Sbjct: 151 ELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEG 210

Query: 318 DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCN 377
           D ++A      M  +G+ P VVTYNSI+  LCK   +  A  +LN M +  + PD +T N
Sbjct: 211 DSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYN 270

Query: 378 TLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA 437
           ++++ YC  G    A+    +M   G+  D  TY  L+   CK      A+++   M   
Sbjct: 271 SILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKR 330

Query: 438 GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYA 497
           G  P   +Y  L+ GY  K     +  LLD  V  G+  D  V+  LI  + K+ KVD A
Sbjct: 331 GLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQA 390

Query: 498 QRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
             +F+ M+  G+  ++V Y ++     ++G
Sbjct: 391 MLVFSKMRQQGLNPNAVTYGAVIGILCKSG 420



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 112/416 (26%), Positives = 191/416 (45%), Gaps = 39/416 (9%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLA-KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           ++FD M    L P +     LL   A K  L +M   +   MV+ G+  + +++++LI A
Sbjct: 322 KIFDSMTKRGLKPEITTYGTLLQGYATKGALVEM-HGLLDLMVRNGIHPDHYVFSILICA 380

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
             K   VD+   +  +M  + +  +  TY  +I + CK G   +A+   ++M  EG+SP 
Sbjct: 381 YAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPG 440

Query: 270 IVTYNSLIHGFC-----------------------------------REGRMREARRLFR 294
            + YNSLIHG C                                   +EGR+ E+ +LF 
Sbjct: 441 NIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFE 500

Query: 295 DIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEG 352
            +   G  PN +TY TLI+GYC A  ++EA++L   M + G+ P  VTY++++   CK  
Sbjct: 501 LMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKIS 560

Query: 353 RIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYK 412
           R+ DA  L  EM    ++PD +T N ++    +   TA+A ++  R+ E+G  ++  TY 
Sbjct: 561 RMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYN 620

Query: 413 ALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSR 472
            ++HG CK K  D A ++   +          +++ ++D        +    L   F S 
Sbjct: 621 IILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSN 680

Query: 473 GLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
           GL  +   YR +      +  ++   +LF  M+ NG   DS +   +     + GE
Sbjct: 681 GLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGE 736



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 77/322 (23%), Positives = 132/322 (40%), Gaps = 42/322 (13%)

Query: 254 ALAVQDRMEREG---ISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTT 308
           A++  +RM R G   ++PD+ TY  LI   CR GR+        ++  KG   + + +T 
Sbjct: 68  AVSRYNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTP 127

Query: 309 LIDGYC---RANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMN 365
           L+ G C   R +D  + +  R  M   G  P V +YN +L+ LC E R ++A  LL+ M 
Sbjct: 128 LLKGLCADKRTSDAMDIVLRR--MTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMA 185

Query: 366 EKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMD 425
           + +                                  G   D  +Y  +I+GF K  + D
Sbjct: 186 DDR--------------------------------GGGSPPDVVSYTTVINGFFKEGDSD 213

Query: 426 IAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
            A      MLD G  P   +Y+ ++   C     +  +++L+  V  G+  D   Y +++
Sbjct: 214 KAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSIL 273

Query: 486 RRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
             +C   +   A      M+ +G+  D V Y+ L     + G       I D M +R L 
Sbjct: 274 HGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLK 333

Query: 546 ITLKIYRSFSASYAKDNEILDL 567
             +  Y +    YA    ++++
Sbjct: 334 PEITTYGTLLQGYATKGALVEM 355



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 68/268 (25%), Positives = 104/268 (38%), Gaps = 72/268 (26%)

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
           K+++ MV++GV  N+  YN LI+  C +  +D+  KLL  M    ++ +  TY+TLI  Y
Sbjct: 497 KLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGY 556

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVT--------------------------------- 272
           CK     +AL +   ME  G+SPDI+T                                 
Sbjct: 557 CKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIEL 616

Query: 273 --YNSLIHGFCRE-----------------------------------GRMREARRLFRD 295
             YN ++HG C+                                    GR  EA+ LF  
Sbjct: 617 STYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVA 676

Query: 296 IK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGR 353
               G  PN+ TY  + +       LEE  +L   M   G        N I+R+L + G 
Sbjct: 677 FSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGE 736

Query: 354 IRDANRLLNEMNEKKIAPDNVTCNTLIN 381
           I  A   L+ ++EK  + +  T +  I+
Sbjct: 737 ITRAGTYLSMIDEKHFSLEASTASLFID 764


>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
 gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
          Length = 716

 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 132/468 (28%), Positives = 199/468 (42%), Gaps = 73/468 (15%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           L  F +M  H + P +  C ++L +L  +   D +  VY +M+QLG+  +I  YN L+ +
Sbjct: 181 LAAFREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDS 240

Query: 210 CCKSSDVDKVEKLLCEMEFK-------DV-----------------------------RA 233
             +   VD+  KLL EME +       DV                             +A
Sbjct: 241 FFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSKKA 300

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISP------------------------- 268
             FT+N LI  Y  +G   +A A+Q  ME EGI P                         
Sbjct: 301 SAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKF 360

Query: 269 ----------DIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRA 316
                     D++TYNSLI+G+C+ G ++EA  LF D+K  G  P+ +TY  L+DGYCR 
Sbjct: 361 VEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRL 420

Query: 317 NDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTC 376
            DLEEA R ++ M  +G  P V TY  ++    K   +       +EM  K + PD    
Sbjct: 421 GDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAY 480

Query: 377 NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD 436
           NT I+A   +G T+ A ++   M+  G+  D  TY   + G CK+  +  A  L   M+ 
Sbjct: 481 NTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVS 540

Query: 437 AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDY 496
            G  P   +Y+ L+  +C +        + D  +  GL      Y   I  +C++  +  
Sbjct: 541 DGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYS 600

Query: 497 AQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL 544
           A   F  M   G+  + V Y  L +A  R G          +M  R L
Sbjct: 601 AYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGL 648



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 111/367 (30%), Positives = 172/367 (46%), Gaps = 37/367 (10%)

Query: 190 KMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKG 249
           +M   G+V  +  YN +IH   +S +V+       EM    +  DL TYN+LI  YCK G
Sbjct: 327 EMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAG 386

Query: 250 MHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYT 307
              EAL +   ++R G++P ++TYN L+ G+CR G + EARR  +++  +G  P+  TYT
Sbjct: 387 NLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYT 446

Query: 308 TLIDGYCRANDL-----------------------------------EEALRLREVMAAK 332
            L++G  +  +L                                    EA +L EVM ++
Sbjct: 447 ILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISR 506

Query: 333 GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
           G+    VTYN  L  LCK G ++DA  L  +M    + PD +T   LI+A+C+ G    A
Sbjct: 507 GISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREA 566

Query: 393 MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
             + + ML +GL     TY   IH +C+   +  A      ML+ G  P+  +Y+ L+  
Sbjct: 567 RDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHA 626

Query: 453 YCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGD 512
            C         +   E + RGL  +   Y  LI   CK+   + A RL++ M  +GI  D
Sbjct: 627 LCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIHPD 686

Query: 513 SVIYTSL 519
              + +L
Sbjct: 687 HCTHNAL 693



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 100/357 (28%), Positives = 175/357 (49%), Gaps = 4/357 (1%)

Query: 153 FDQMRVHNLMPHLHACTVLLNSLAK-DRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           F +MR   L+P L     L+N   K   L + +W ++  + + G+  ++  YN+L+   C
Sbjct: 360 FVEMRAMGLLPDLITYNSLINGYCKAGNLKEALW-LFGDLKRAGLAPSVLTYNILLDGYC 418

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           +  D+++  +   EM  +  + D+ TY  L+    K           D M  +G+ PD  
Sbjct: 419 RLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCF 478

Query: 272 TYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
            YN+ I      G   EA +L   +  +G + + VTY   +DG C++ +L++A  L   M
Sbjct: 479 AYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKM 538

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
            + G+ P  +TY  ++   C+ GR+R+A  + + M    + P  VT    I+AYC+ G+ 
Sbjct: 539 VSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNL 598

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
            SA     +MLE G+  ++ TY  LIH  C+    ++A +    ML+ G SP+  +Y+ L
Sbjct: 599 YSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLL 658

Query: 450 VDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQG 506
           +DG C + N E  ++L  E    G+  D   + AL + F + +     Q + N++ G
Sbjct: 659 IDGNCKEGNWEEAIRLYSEMHQHGIHPDHCTHNALFKGFDEGQSKHAIQYMENVVLG 715



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 90/291 (30%), Positives = 144/291 (49%), Gaps = 4/291 (1%)

Query: 132 VLSWLVIF--YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYK 189
           VL++ ++   Y  L   ++  +   +M      P +   T+L+N   K R   MV + + 
Sbjct: 407 VLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFD 466

Query: 190 KMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKG 249
           +M+  G+  +   YN  I A        +  +L   M  + + +D  TYN  +   CK G
Sbjct: 467 EMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSG 526

Query: 250 MHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYT 307
              +A  +  +M  +G+ PD +TY  LIH  C  GR+REAR +F    + G  P+ VTYT
Sbjct: 527 NLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYT 586

Query: 308 TLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEK 367
             I  YCR  +L  A    + M  +GV P  VTYN ++  LC+ GR   A +  +EM E+
Sbjct: 587 VFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLER 646

Query: 368 KIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGF 418
            ++P+  T   LI+  CK G+   A+++ + M + G+  D  T+ AL  GF
Sbjct: 647 GLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIHPDHCTHNALFKGF 697



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/212 (23%), Positives = 84/212 (39%), Gaps = 5/212 (2%)

Query: 361 LNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCK 420
             EM    + P    CN ++ A            V   ML+ G+     TY  L+  F +
Sbjct: 184 FREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFR 243

Query: 421 AKEMDIAKELLFGM--LDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEF-VSRGLCVD 477
              +D A +LL  M     G  PS  +Y+ +++G   K   E   +L+D   +S+     
Sbjct: 244 EGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSKK--AS 301

Query: 478 VSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILD 537
              +  LI  +  +  V+ A  L   M+  GI+   V Y ++ +  +R+G  +A      
Sbjct: 302 AFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFV 361

Query: 538 DMYRRRLMITLKIYRSFSASYAKDNEILDLFW 569
           +M    L+  L  Y S    Y K   + +  W
Sbjct: 362 EMRAMGLLPDLITYNSLINGYCKAGNLKEALW 393


>gi|296088147|emb|CBI35592.3| unnamed protein product [Vitis vinifera]
          Length = 883

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 120/396 (30%), Positives = 196/396 (49%), Gaps = 3/396 (0%)

Query: 169 TVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEF 228
           + LL  LAK  +  + + VY++MV  G V     Y  +++A CK+  V   E   C++  
Sbjct: 163 STLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLR 222

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMERE-GISPDIVTYNSLIHGFCREGRMR 287
                D     +L+   C++    EA  V ++M +E    P+ VTY+ LIHG C  GR+ 
Sbjct: 223 LGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLE 282

Query: 288 EARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSIL 345
           EA +L +++  KG  P+  TYT LI   C     ++A+++ + MA K   P V TY  ++
Sbjct: 283 EAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILI 342

Query: 346 RKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLM 405
            +LC+EG+I +AN +  +M +  + P  +T N LIN YCK G   SA ++ + M +    
Sbjct: 343 DRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCK 402

Query: 406 LDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKL 465
            +  TY  L+ G C+  +   A  LL  ++D G  P   +Y+ LVDG+C +        +
Sbjct: 403 PNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNI 462

Query: 466 LDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWR 525
            +   S GL  D   + ALI   CK  +++ A  +   M   GI  D V +T+L   + +
Sbjct: 463 FNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCK 522

Query: 526 AGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKD 561
            G+ K    + ++M   R + T   +  F  +  KD
Sbjct: 523 IGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKD 558



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 127/472 (26%), Positives = 214/472 (45%), Gaps = 38/472 (8%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQM-RVHNLMPHLHACTVLLNSLAKDRLTDMVWKV 187
           ++HV + LV+         +  +VF++M +  N  P+    ++L++ L +    +  +++
Sbjct: 228 DTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQL 287

Query: 188 YKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCK 247
            ++MV+ G   +   Y VLI A C     DK  K+L EM  K    ++ TY  LI   C+
Sbjct: 288 KQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCR 347

Query: 248 KGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGAT--PNHVT 305
           +G   EA  V  +M + G+ P I+T+N+LI+G+C+EG +  A +L   ++     PN  T
Sbjct: 348 EGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRT 407

Query: 306 YTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMN 365
           Y  L++G CR +   +A  L   +   G+ P  VTYN ++   CKEG++  A  + N MN
Sbjct: 408 YNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMN 467

Query: 366 EKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCK-AKEM 424
              + PD  T   LI+  CK+G    A  +   M++ G+ LD+ T+ ALI G CK  K  
Sbjct: 468 SAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAK 527

Query: 425 DI----------------------------------AKELLFGMLDAGFSPSYCSYSWLV 450
           D+                                  A  +L  M+  G  PS  +++ L+
Sbjct: 528 DVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILI 587

Query: 451 DGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGIL 510
           +G+C        LK+L+     G   +V  Y  +I   C   +V+ A+ +   M   G+ 
Sbjct: 588 EGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVS 647

Query: 511 GDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDN 562
            +   Y  L  A+ +AG       I+  M +        IY +  + +   N
Sbjct: 648 PNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSN 699



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 121/454 (26%), Positives = 194/454 (42%), Gaps = 49/454 (10%)

Query: 179 RLTDMVWKVYKKMVQLGVVANIHLYNV-------LIHACCKSSD-VDKVEKLLCEMEFKD 230
           R +   + +  ++  LGV+ +  L+ V       LI  C  S + V K+   L  M    
Sbjct: 95  RQSSYCYDLDGRIQLLGVLVSRDLFGVAQKAVVLLIQECEDSENGVVKLMGALDGMTELG 154

Query: 231 VRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMR--- 287
            R     Y+TL+    K  M + A  V  RM  EG     + Y ++++  C+ G ++   
Sbjct: 155 FRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAE 214

Query: 288 --------------------------------EARRLFRDI---KGATPNHVTYTTLIDG 312
                                           EA R+F  +   +   PN VTY+ LI G
Sbjct: 215 MFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHG 274

Query: 313 YCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPD 372
            C A  LEEA +L++ M  KG  P   TY  +++  C  G    A ++L+EM  K   P+
Sbjct: 275 LCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPN 334

Query: 373 NVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLF 432
             T   LI+  C+ G    A  V  +ML+ GL     T+ ALI+G+CK   +  A +LL 
Sbjct: 335 VHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLS 394

Query: 433 GMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKE 492
            M      P+  +Y+ L++G C  +       LL   V  GL  D   Y  L+  FCK+ 
Sbjct: 395 VMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEG 454

Query: 493 KVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYR 552
           +++ A  +FN M   G+  D   +T+L     + G  +  + IL  M ++ + +    + 
Sbjct: 455 QLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFT 514

Query: 553 SFSASYAKDNEILD---LFWSHVVDRGLMSKHIF 583
           +    + K  +  D   LF + V +R L + H F
Sbjct: 515 ALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTF 548



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 91/361 (25%), Positives = 166/361 (45%), Gaps = 28/361 (7%)

Query: 169 TVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEF 228
           T L++   K      V  +++ MV+   +   H +N  + A  K   +++   +L +M  
Sbjct: 514 TALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMK 573

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
             +   + T+  LI  +C+ G    +L + +RM++ G SP++ TY  +I+G C  GR+ E
Sbjct: 574 YGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEE 633

Query: 289 ARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSIL- 345
           A  +   +   G +PNH TY  L+  + +A  L+ A ++   M   G  P    Y+++L 
Sbjct: 634 AETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLS 693

Query: 346 -----------RKLCKEGRI---------RDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
                      R L   G +          D N L NE+ +  +  +++  N L+   CK
Sbjct: 694 GFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSNEIKKCGVPTEDLY-NFLVVGLCK 752

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            G    A ++   M++ GL  D+    ++I  +CK  + D   E +  +LD  F PS+ S
Sbjct: 753 EGRIIEADQLTQDMVKHGLFPDK-AISSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFAS 811

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSR-GLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
           Y W++ G  N+   +   KL+ + V   G+  +V V  ++   F  KE+ D   +   L+
Sbjct: 812 YCWVIHGLRNEGRVQEAQKLVSDLVRHTGIEEEVEVTPSI--EFLMKEEEDDPDKCLKLI 869

Query: 505 Q 505
           +
Sbjct: 870 K 870


>gi|357458533|ref|XP_003599547.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355488595|gb|AES69798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 636

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 113/381 (29%), Positives = 192/381 (50%), Gaps = 2/381 (0%)

Query: 171 LLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKD 230
           L+N L K   T    ++ +K+    V  N+ +YN +I + CK   V    +L  +M  K 
Sbjct: 179 LINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKK 238

Query: 231 VRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREAR 290
           +  D+ T++ LI  +C  G   EA  +   M  + I+PD  T+N L+   C+EG ++ A+
Sbjct: 239 ISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAK 298

Query: 291 RLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
            +   +  +G  PN VTY++L+DGYC  N + +A  +   ++  G  P   +Y +++   
Sbjct: 299 NMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGF 358

Query: 349 CKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ 408
           CK   + +A  L N+M  K IAPD VT N+LI+  CK G  + A ++ + M + G   + 
Sbjct: 359 CKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANI 418

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
           FTY  LI   CK   +D A  L+  + D G  P   +++ L+ G C     +    +  +
Sbjct: 419 FTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQD 478

Query: 469 FVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
            +S+G  V+   Y  ++   CK+   D A+ L + M  NGI+ D+V Y +L  A +   E
Sbjct: 479 LLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTYETLIQALFHKDE 538

Query: 529 PKACSDILDDMYRRRLMITLK 549
            +    +L +M  R ++  L+
Sbjct: 539 NEKAEKLLREMIARDVVYALE 559



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 103/317 (32%), Positives = 160/317 (50%), Gaps = 2/317 (0%)

Query: 226 MEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGR 285
           +EF  +  D+FT+N LI  YC       A ++  ++ + G  PD +T+N+LI G C  G+
Sbjct: 94  LEFHGITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGK 153

Query: 286 MREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNS 343
           ++EA      +   G   +  +Y TLI+G C+  +   AL++   +  K V   VV YN+
Sbjct: 154 VKEALHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNT 213

Query: 344 ILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAG 403
           I+  LCK   + DA  L ++M  KKI+PD VT + LI  +C +G    A  +   M+   
Sbjct: 214 IIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKN 273

Query: 404 LMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALL 463
           +  D +T+  L+   CK   +  AK +L  M+  G  P+  +YS L+DGYC  N      
Sbjct: 274 INPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAK 333

Query: 464 KLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAY 523
            +L+     G   +   Y  +I  FCK + VD A  LFN MQ  GI  D V Y SL    
Sbjct: 334 HVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGL 393

Query: 524 WRAGEPKACSDILDDMY 540
            ++G      +++D+M+
Sbjct: 394 CKSGRISYAWELVDEMH 410



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 105/390 (26%), Positives = 182/390 (46%), Gaps = 2/390 (0%)

Query: 155 QMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSS 214
           ++  H + P +    +L+N        +  + +  K++++G   +   +N LI   C + 
Sbjct: 93  RLEFHGITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNG 152

Query: 215 DVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYN 274
            V +       +       D F+Y TLI   CK G    AL +  +++ + +  ++V YN
Sbjct: 153 KVKEALHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYN 212

Query: 275 SLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAK 332
           ++I   C+   + +A  L+  +  K  +P+ VT++ LI G+C    LEEA  L   M  K
Sbjct: 213 TIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLK 272

Query: 333 GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
            + P   T+N ++  LCKEG ++ A  +L  M ++ + P+ VT ++L++ YC +     A
Sbjct: 273 NINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKA 332

Query: 393 MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
             V N + + G   +  +Y  +I+GFCK K +D A  L   M   G +P   +Y+ L+DG
Sbjct: 333 KHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDG 392

Query: 453 YCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGD 512
            C         +L+DE    G   ++  Y  LI   CK   VD A  L   ++  GI  D
Sbjct: 393 LCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPD 452

Query: 513 SVIYTSLAYAYWRAGEPKACSDILDDMYRR 542
              +  L Y   + G  K   D+  D+  +
Sbjct: 453 MYTFNILIYGLCKVGRLKNAQDVFQDLLSK 482



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 117/447 (26%), Positives = 212/447 (47%), Gaps = 22/447 (4%)

Query: 46  VLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIA 105
           +L+N Y  CH+  ++ AF   A+     Y+    +  T+I  L  N   K A +  + + 
Sbjct: 108 ILINCY--CHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHVL 165

Query: 106 LRDF----LSTPSVLNALVKIHDDPDG-------NSHVLSWLVIFYANL-------KMTQ 147
              F     S  +++N L KI +           +  ++   V+ Y  +       K+  
Sbjct: 166 ALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVI 225

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D  +++ QM    + P +   + L+         +  + ++++MV   +  + + +N+L+
Sbjct: 226 DAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILV 285

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
            A CK  ++   + +L  M  + V  ++ TY++L+  YC      +A  V + + + G +
Sbjct: 286 DALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAA 345

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
           P+  +Y ++I+GFC+   + EA  LF D+  KG  P+ VTY +LIDG C++  +  A  L
Sbjct: 346 PNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWEL 405

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
            + M   G    + TYN ++  LCK   +  A  L+ ++ ++ I PD  T N LI   CK
Sbjct: 406 VDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCK 465

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
           +G   +A  V   +L  G  ++ +TY  +++G CK    D A+ LL  M D G  P   +
Sbjct: 466 VGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAVT 525

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSR 472
           Y  L+    +K+  E   KLL E ++R
Sbjct: 526 YETLIQALFHKDENEKAEKLLREMIAR 552



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 90/332 (27%), Positives = 156/332 (46%), Gaps = 34/332 (10%)

Query: 27  AKLLNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIH 86
           AK ++P++   +T +A+      +Y  C +  L  AF  + E  + N      +   ++ 
Sbjct: 236 AKKISPDV---VTFSAL------IYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVD 286

Query: 87  ILTKNKHFKSAQNML----EKIALRDFLSTPS----------------VLNALVKIHDDP 126
            L K  + K A+NML    ++  + + ++  S                VLN + ++   P
Sbjct: 287 ALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAP 346

Query: 127 DGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWK 186
             N+H    ++  +  +KM  + L +F+ M+   + P       L++ L K       W+
Sbjct: 347 --NAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWE 404

Query: 187 VYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYC 246
           +  +M   G  ANI  YN LI A CK+  VD+   L+ +++ + ++ D++T+N LI   C
Sbjct: 405 LVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLC 464

Query: 247 KKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR--DIKGATPNHV 304
           K G    A  V   +  +G S +  TYN +++G C+EG   EA  L    D  G  P+ V
Sbjct: 465 KVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAV 524

Query: 305 TYTTLIDGYCRANDLEEALR-LREVMAAKGVY 335
           TY TLI      ++ E+A + LRE++A   VY
Sbjct: 525 TYETLIQALFHKDENEKAEKLLREMIARDVVY 556


>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
 gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
          Length = 773

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 120/426 (28%), Positives = 207/426 (48%), Gaps = 5/426 (1%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D L+V D+M      P      V+L +  +        +V + M   G   +    N+++
Sbjct: 129 DALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVL 188

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           +A C+   VD+   LL ++ F    AD+ +YN ++   C      +   + D M R   +
Sbjct: 189 NAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCA 248

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRL 325
           P+IVT+N+LI   CR G       +   +   G TP+   Y T+IDG C+   LE A  +
Sbjct: 249 PNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEI 308

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
              M + G+ P VV YN++L+ LC   R ++A  LL+EM +K    D+VT N L++ +C+
Sbjct: 309 LNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQ 368

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            G     +++  +ML  G M D  TY  +I+GFCK   +D A  LL  M   G  P+  S
Sbjct: 369 NGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVS 428

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+ ++ G C+        +L+ + + +G   +   +  LI   CKK  V+ A  L   M 
Sbjct: 429 YTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQML 488

Query: 506 GNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKD---N 562
            NG   D + Y+++     +AG+ +   ++L+ M  + +     IY S + + +++   N
Sbjct: 489 VNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVN 548

Query: 563 EILDLF 568
           +++ +F
Sbjct: 549 KVIQMF 554



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 110/394 (27%), Positives = 193/394 (48%), Gaps = 2/394 (0%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           ++ D+M   +  P++     L+  L ++ L + V +V  +M + G   +I +Y  +I   
Sbjct: 237 ELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGI 296

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           CK   ++   ++L  M    ++ ++  YNT++   C      EA  +   M ++    D 
Sbjct: 297 CKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDD 356

Query: 271 VTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
           VT+N L+  FC+ G +     L   +   G  P+ +TYTT+I+G+C+   ++EA+ L + 
Sbjct: 357 VTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKS 416

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M++ G  P  V+Y  +L+ LC  GR  DA  L+++M ++   P+ VT NTLIN  CK G 
Sbjct: 417 MSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGL 476

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
              A+++  +ML  G   D  +Y  +I G  KA + + A ELL  M++ G SP+   YS 
Sbjct: 477 VEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSS 536

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG 508
           +      +     ++++ D      +  D  +Y A+I   CK+ + D A   F  M  NG
Sbjct: 537 IACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNG 596

Query: 509 ILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRR 542
            + +   YT L       G  K   ++L ++  R
Sbjct: 597 CMPNESTYTMLIKGLASEGLAKEAQELLSELCSR 630



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 117/440 (26%), Positives = 202/440 (45%), Gaps = 6/440 (1%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           ++ ++V + M           C ++LN++ +    D    + +K+   G  A+I  YN +
Sbjct: 163 RNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAV 222

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           +   C +     VE+L+ EM   D   ++ T+NTLI   C+ G+      V  +M   G 
Sbjct: 223 LKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGC 282

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALR 324
           +PDI  Y ++I G C+EG +  A  +   +   G  PN V Y T++ G C A   +EA  
Sbjct: 283 TPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEE 342

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           L   M  K      VT+N ++   C+ G +     LL +M      PD +T  T+IN +C
Sbjct: 343 LLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFC 402

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           K G    A+ +   M   G   +  +Y  ++ G C A     A+EL+  M+  G  P+  
Sbjct: 403 KEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPV 462

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
           +++ L++  C K   E  ++LL + +  G   D+  Y  +I    K  K + A  L N+M
Sbjct: 463 TFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVM 522

Query: 505 QGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAK---D 561
              GI  +++IY+S+A A  R G       + D++    +     +Y +  +S  K    
Sbjct: 523 VNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWET 582

Query: 562 NEILDLFWSHVVDRGLMSKH 581
           +  +D F++++V  G M   
Sbjct: 583 DRAID-FFAYMVSNGCMPNE 601



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 101/375 (26%), Positives = 176/375 (46%), Gaps = 42/375 (11%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           +V  QM  H   P +     +++ + K+   ++  ++  +M   G+  N+  YN ++   
Sbjct: 272 EVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGL 331

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           C +    + E+LL EM  KD   D  T+N L+  +C+ G+    + + ++M   G  PD+
Sbjct: 332 CSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDV 391

Query: 271 VTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREV 328
           +TY ++I+GFC+EG + EA  L + +   G  PN V+YT ++ G C A    +A  L   
Sbjct: 392 ITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQ 451

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M  +G  P  VT+N+++  LCK+G +  A  LL +M     +PD ++ +T+I+   K G 
Sbjct: 452 MIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGK 511

Query: 389 TASAMKVKNRMLEAGL-------------------------MLDQFT----------YKA 413
           T  A+++ N M+  G+                         M D             Y A
Sbjct: 512 TEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNA 571

Query: 414 LIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
           +I   CK  E D A +    M+  G  P+  +Y+ L+ G  ++   +   +LL E  SRG
Sbjct: 572 VISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631

Query: 474 LCVDVSVYRALIRRF 488
                ++ + L+R F
Sbjct: 632 -----ALRKHLMRHF 641



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 82/299 (27%), Positives = 140/299 (46%), Gaps = 2/299 (0%)

Query: 231 VRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREAR 290
           V  + +T+  ++   C +G   +AL V D M  +G +P    Y+ ++   CR G  R + 
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166

Query: 291 RLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
           R+   +  KG T +      +++  C    ++EA+ L   +A  G    +V+YN++L+ L
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226

Query: 349 CKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ 408
           C   R  D   L++EM     AP+ VT NTLI   C+ G      +V  +M E G   D 
Sbjct: 227 CMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDI 286

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
             Y  +I G CK   +++A E+L  M   G  P+   Y+ ++ G C+    +   +LL E
Sbjct: 287 RMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSE 346

Query: 469 FVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
              +   +D   +  L+  FC+   VD    L   M  +G + D + YT++   + + G
Sbjct: 347 MFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEG 405



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 72/273 (26%), Positives = 134/273 (49%), Gaps = 1/273 (0%)

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           +V YN+++ G+CR G++  ARRL   +    PN  T+  ++ G C    + +AL + + M
Sbjct: 79  VVAYNAMVAGYCRAGQLAAARRLAAAVP-VPPNAYTFFPVVRGLCTRGRIADALEVLDEM 137

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
           + KG  P    Y+ IL   C+ G  R++ R+L  M+ K    D   CN ++NA C+ G  
Sbjct: 138 SFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCV 197

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
             A+ +  ++   G   D  +Y A++ G C AK     +EL+  M+    +P+  +++ L
Sbjct: 198 DEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTL 257

Query: 450 VDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGI 509
           +   C     E + ++L +    G   D+ +Y  +I   CK+  ++ A  + N M   G+
Sbjct: 258 IGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGL 317

Query: 510 LGDSVIYTSLAYAYWRAGEPKACSDILDDMYRR 542
             + V Y ++      A   K   ++L +M+++
Sbjct: 318 KPNVVCYNTVLKGLCSAERWKEAEELLSEMFQK 350



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 87/372 (23%), Positives = 156/372 (41%), Gaps = 56/372 (15%)

Query: 71  VPNY--KHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDG 128
           +P+Y  K ++  + T++  L   + +K A+ +L ++  +D        N LV        
Sbjct: 312 MPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVD------- 364

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
                     F+    +    +++ +QM  H  MP +   T ++N   K+ L D    + 
Sbjct: 365 ----------FFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLL 414

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
           K M   G   N   Y +++   C +      E+L+ +M  +    +  T+NTLI   CKK
Sbjct: 415 KSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKK 474

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTY 306
           G+  +A+ +  +M   G SPD+++Y+++I G  + G+  EA  L   +  KG +PN    
Sbjct: 475 GLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPN---- 530

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
                                           + Y+SI   L +EGR+    ++ + + +
Sbjct: 531 -------------------------------TIIYSSIACALSREGRVNKVIQMFDNIKD 559

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
             I  D V  N +I++ CK  +T  A+     M+  G M ++ TY  LI G         
Sbjct: 560 TTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKE 619

Query: 427 AKELLFGMLDAG 438
           A+ELL  +   G
Sbjct: 620 AQELLSELCSRG 631



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/185 (24%), Positives = 84/185 (45%), Gaps = 2/185 (1%)

Query: 122 IHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLT 181
           I      N    + L+ F     + +  +++  QM V+   P L + + +++ L K   T
Sbjct: 453 IQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKT 512

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
           +   ++   MV  G+  N  +Y+ +  A  +   V+KV ++   ++   +R+D   YN +
Sbjct: 513 EEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAV 572

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGA 299
           I+  CK+     A+     M   G  P+  TY  LI G   EG  +EA+ L  ++  +GA
Sbjct: 573 ISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGA 632

Query: 300 TPNHV 304
              H+
Sbjct: 633 LRKHL 637


>gi|356560325|ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Glycine max]
          Length = 746

 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 126/433 (29%), Positives = 202/433 (46%), Gaps = 15/433 (3%)

Query: 106 LRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANL----KMTQDG--LQVFDQMRVH 159
           LR  L +    +AL  + + P  NS       I +  L    +   DG  + +  ++   
Sbjct: 181 LRVLLKSGRAGDALHVLDEMPQANSGFSVTGEIVFGELVRSGRSFPDGEVVGLVAKLGER 240

Query: 160 NLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKV 219
            + P     T L+  L  D+   + W+V   +++LG   +    N L+    +  D+ ++
Sbjct: 241 GVFPDGFKLTQLVGKLCGDQKNGVAWEVLHCVMRLGGAVDAASCNALLTWLGRGRDIKRM 300

Query: 220 EKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG------ISPDIVTY 273
            +LL EME + +R  + T+  L+   CK     EAL V DR+  +G      + PD+V +
Sbjct: 301 NELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLF 360

Query: 274 NSLIHGFCREGRMREARRLFRDIKGAT---PNHVTYTTLIDGYCRANDLEEALRLREVMA 330
           N+LI G C+ G+  +   L  ++K      PN VTY  LIDG+ +A + + A  L   M 
Sbjct: 361 NTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMN 420

Query: 331 AKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTA 390
            +GV P V+T N+++  LCK GR+  A    NEM  K +  +  T   LI+A+C + +  
Sbjct: 421 EEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNIN 480

Query: 391 SAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLV 450
            AM+    ML +G   D   Y +LI G C A  M+ A  ++  +  AGFS     Y+ L+
Sbjct: 481 RAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLI 540

Query: 451 DGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGIL 510
            G+C K   E + +LL E    G+  D   Y  LI    K      A ++   M   G+ 
Sbjct: 541 SGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLR 600

Query: 511 GDSVIYTSLAYAY 523
              V Y ++ +AY
Sbjct: 601 PSVVTYGAIIHAY 613



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 111/399 (27%), Positives = 185/399 (46%), Gaps = 45/399 (11%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQ------LGVVANIHLYN 204
           ++  +M    + P +    +L+N L K R  D   +V+ ++        +GV  ++ L+N
Sbjct: 302 ELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLFN 361

Query: 205 VLIHACCKSSDVDKVEKLLCEMEFKDV-RADLFTYNTLIALYCKKGMHYEALAVQDRMER 263
            LI   CK    +    LL EM+  ++ R +  TYN LI  + K G    A  +  +M  
Sbjct: 362 TLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNE 421

Query: 264 EGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGA--TPNHVTYTTLIDGYCRANDLEE 321
           EG+ P+++T N+L+ G C+ GR+  A   F ++KG     N  TYT LI  +C  N++  
Sbjct: 422 EGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINR 481

Query: 322 ALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDAN----------------------- 358
           A++  E M + G  P  V Y S++  LC  GR+ DA+                       
Sbjct: 482 AMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLIS 541

Query: 359 ------------RLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLML 406
                        LL EM E  + PD +T NTLI+   K GD A+A KV  +M++ GL  
Sbjct: 542 GFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRP 601

Query: 407 DQFTYKALIHGFCKAKEMDIAKELLFGMLDAG-FSPSYCSYSWLVDGYCNKNNEEALLKL 465
              TY A+IH +C  K +D   ++   M       P+   Y+ L+D  C  N+ +  + L
Sbjct: 602 SVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVDRAISL 661

Query: 466 LDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
           +++   + +  + + Y A+++    K+ +  A  L + M
Sbjct: 662 MEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAFELMDRM 700



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 90/328 (27%), Positives = 155/328 (47%), Gaps = 4/328 (1%)

Query: 147 QDGLQVFDQMRVHNL-MPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNV 205
           +DGL + ++M++ N+  P+      L++   K    D   +++++M + GV  N+   N 
Sbjct: 374 EDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNT 433

Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
           L+   CK   V +  +   EM+ K ++ +  TY  LI+ +C       A+   + M   G
Sbjct: 434 LVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSG 493

Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEAL 323
            SPD V Y SLI G C  GRM +A  +   +K  G + +   Y  LI G+C+   LE   
Sbjct: 494 CSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVY 553

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
            L   M   GV P  +TYN+++  L K G    A++++ +M ++ + P  VT   +I+AY
Sbjct: 554 ELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAY 613

Query: 384 CKIGDTASAMKVKNRMLEAG-LMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           C   +    MK+   M     +  +   Y  LI   C+  ++D A  L+  M      P+
Sbjct: 614 CSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVDRAISLMEDMKVKRVRPN 673

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFV 470
             +Y+ ++ G  +K       +L+D  V
Sbjct: 674 TTTYNAILKGVRDKKMLHKAFELMDRMV 701



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 83/265 (31%), Positives = 131/265 (49%), Gaps = 5/265 (1%)

Query: 128 GNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLA-KDRLTDMVWK 186
           GN+   + L+  +  +      +Q F++M      P       L++ L    R+ D    
Sbjct: 461 GNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMND-ASV 519

Query: 187 VYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYC 246
           V  K+   G   +   YNVLI   CK   +++V +LL EME   V+ D  TYNTLI+   
Sbjct: 520 VVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLG 579

Query: 247 KKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGAT---PNH 303
           K G    A  V ++M +EG+ P +VTY ++IH +C +  + E  ++F ++   +   PN 
Sbjct: 580 KTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNT 639

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
           V Y  LID  CR ND++ A+ L E M  K V P   TYN+IL+ +  +  +  A  L++ 
Sbjct: 640 VIYNILIDALCRNNDVDRAISLMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAFELMDR 699

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGD 388
           M E+   PD +T   L      +G+
Sbjct: 700 MVEEACRPDYITMEVLTEWLSAVGE 724



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 139/524 (26%), Positives = 214/524 (40%), Gaps = 81/524 (15%)

Query: 25  HW------AKLLNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVP-NYKHS 77
           HW      + L NP   S L+S    ++ L L +   IP  S  F K+  +  P ++ HS
Sbjct: 49  HWDHDKLHSILFNP---SPLSSHHFLQITLQLSS---IPK-SLQFLKYLSAKAPQHHPHS 101

Query: 78  LQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLV 137
           L S +    +   ++H  S  ++L     R   ST   L         P   S +L  L 
Sbjct: 102 LSSVFQG-SLELASRHPNSQTHLLSLHRFRK--STHPTLPL------TPKSASLLLQCL- 151

Query: 138 IFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQ---- 193
               N ++  D L +F+Q+   +  P L  C  LL  L K         V  +M Q    
Sbjct: 152 ---ENARLVNDSLLLFNQLDPSSKSPQL--CHGLLRVLLKSGRAGDALHVLDEMPQANSG 206

Query: 194 LGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYC---KKGM 250
             V   I ++  L+ +  +S    +V  L+ ++  + V  D F    L+   C   K G+
Sbjct: 207 FSVTGEI-VFGELVRSG-RSFPDGEVVGLVAKLGERGVFPDGFKLTQLVGKLCGDQKNGV 264

Query: 251 HYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLI 310
            +E L    R+   G + D  + N+L+    R           RDIK             
Sbjct: 265 AWEVLHCVMRL---GGAVDAASCNALLTWLGRG----------RDIK------------- 298

Query: 311 DGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKK-- 368
               R N+L     L E M  + + P VVT+  ++  LCK  RI +A ++ + +  K   
Sbjct: 299 ----RMNEL-----LAE-MEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGS 348

Query: 369 ----IAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGL-MLDQFTYKALIHGFCKAKE 423
               + PD V  NTLI+  CK+G     + +   M    +   +  TY  LI GF KA  
Sbjct: 349 NWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGN 408

Query: 424 MDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRA 483
            D A EL   M + G  P+  + + LVDG C        ++  +E   +GL  + + Y A
Sbjct: 409 FDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTA 468

Query: 484 LIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
           LI  FC    ++ A + F  M  +G   D+V+Y SL      AG
Sbjct: 469 LISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAG 512



 Score = 52.8 bits (125), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 45/207 (21%), Positives = 94/207 (45%), Gaps = 10/207 (4%)

Query: 342 NSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT---ASAMKVKNR 398
           + +LR L K GR  DA  +L+EM +   +  +VT   +     + G +      + +  +
Sbjct: 178 HGLLRVLLKSGRAGDALHVLDEMPQAN-SGFSVTGEIVFGELVRSGRSFPDGEVVGLVAK 236

Query: 399 MLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNN 458
           + E G+  D F    L+   C  ++  +A E+L  ++  G +    S + L+       +
Sbjct: 237 LGERGVFPDGFKLTQLVGKLCGDQKNGVAWEVLHCVMRLGGAVDAASCNALLTWLGRGRD 296

Query: 459 EEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGN------GILGD 512
            + + +LL E   R +   V  +  L+   CK  ++D A ++F+ ++G       G+  D
Sbjct: 297 IKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPD 356

Query: 513 SVIYTSLAYAYWRAGEPKACSDILDDM 539
            V++ +L     + G+ +    +L++M
Sbjct: 357 VVLFNTLIDGLCKVGKEEDGLSLLEEM 383


>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
 gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
          Length = 544

 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 109/330 (33%), Positives = 170/330 (51%), Gaps = 5/330 (1%)

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
           Y  +  T +   +  ++      P++   ++++N   K    +  W+V+ KM++   V N
Sbjct: 218 YCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPN 277

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK-GMHYEALAVQ 258
              +N LI   CK+  ++   KL  EME    +A + TYNTLI   CKK G  Y A+ + 
Sbjct: 278 AVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLF 337

Query: 259 DRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKG-ATPNHVTYTTLIDGYCRAN 317
           +++E  G++P IVTYNSLI GFC   R+ EA + F +++G   PN +TY+ LIDG C+  
Sbjct: 338 NKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEGKCAPNVITYSILIDGLCKVR 397

Query: 318 DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCN 377
            ++EA +  E M A G  P VVTY  ++   CK G ++ A     +M     AP+ V  N
Sbjct: 398 RMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFN 457

Query: 378 TLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA 437
           TLI+  CK       +++   M   G   D  TY  LI G C A  ++ A+ L  GM  A
Sbjct: 458 TLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFDGMACA 517

Query: 438 GFSPSYCSYSWLVDGYCNKNNEEALLKLLD 467
              P+  ++++L+ G C +   E    +LD
Sbjct: 518 ---PNVTTFNFLIRGLCAQKKVEEARNILD 544



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 124/412 (30%), Positives = 192/412 (46%), Gaps = 15/412 (3%)

Query: 104 IALRDFLSTPSVLNALVKIHDDPDGNSHV--------LSWLVIFYANLKMTQDGLQVFDQ 155
           I LR F     V +AL  + D    +S V        L  L     +    +  ++ F +
Sbjct: 107 ILLRGFFMAGRVRDALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKE 166

Query: 156 MRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSD 215
           M+   + P L +  +LL++L+          ++  M       +I  YNVL+   CK   
Sbjct: 167 MKASGVEPDLESYHILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQ 223

Query: 216 VDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNS 275
             + + L+ E+       ++FTY+ +I  YCK     EA  V  +M      P+ VT+N+
Sbjct: 224 TYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNT 283

Query: 276 LIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRA-NDLEEALRLREVMAAK 332
           LI GFC+ G + +A +LF +++  G     VTY TLID  C+    +  A+ L   +   
Sbjct: 284 LIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGA 343

Query: 333 GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
           G+ P +VTYNS+++  C   R+ +A +  +EM E K AP+ +T + LI+  CK+     A
Sbjct: 344 GLTPTIVTYNSLIQGFCDARRLSEAMQYFDEM-EGKCAPNVITYSILIDGLCKVRRMKEA 402

Query: 393 MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
            K    M   G      TY  LI+GFCK  E+  A      M  AG +P+   ++ L+DG
Sbjct: 403 AKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDG 462

Query: 453 YCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
            C        L+LL    + G   DV  Y  LI   C   +V+ AQRLF+ M
Sbjct: 463 LCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFDGM 514



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 109/343 (31%), Positives = 177/343 (51%), Gaps = 7/343 (2%)

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
           P +    VL++   K   T     + K++++ G   N+  Y+++I+  CK   V++  ++
Sbjct: 206 PDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEV 265

Query: 223 LCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR 282
             +M   +   +  T+NTLIA +CK GM  +A+ +   ME+ G    IVTYN+LI   C+
Sbjct: 266 FMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCK 325

Query: 283 E-GRMREARRLFRDIKGA--TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVV 339
           + G +  A  LF  ++GA  TP  VTY +LI G+C A  L EA++  + M  K   P V+
Sbjct: 326 KRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEGK-CAPNVI 384

Query: 340 TYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRM 399
           TY+ ++  LCK  R+++A + L +M      P  VT   LIN +CK G+  SA+    +M
Sbjct: 385 TYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKM 444

Query: 400 LEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNE 459
             AG   +   +  LI G CKA+  +    LL  M   G  P   +Y+ L+ G C+ N  
Sbjct: 445 KLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRV 504

Query: 460 EALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
           E   +L D         +V+ +  LIR  C ++KV+ A+ + +
Sbjct: 505 EDAQRLFDGMACA---PNVTTFNFLIRGLCAQKKVEEARNILD 544



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 103/361 (28%), Positives = 173/361 (47%), Gaps = 7/361 (1%)

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
           +   + +K+M   GV  ++  Y++L+ A   S  + +   L   M       D+ TYN L
Sbjct: 158 EQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAM---TCSPDIMTYNVL 214

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGA 299
           +  YCK G  YEA ++   + + G  P++ TY+ +I+ +C+  ++ EA  +F  +     
Sbjct: 215 MDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNC 274

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE-GRIRDAN 358
            PN VT+ TLI G+C+A  LE+A++L   M   G    +VTYN+++  LCK+ G +  A 
Sbjct: 275 VPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAV 334

Query: 359 RLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGF 418
            L N++    + P  VT N+LI  +C     + AM+  + M E     +  TY  LI G 
Sbjct: 335 DLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEM-EGKCAPNVITYSILIDGL 393

Query: 419 CKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDV 478
           CK + M  A + L  M   G++P+  +Y  L++G+C     ++ L   ++    G   + 
Sbjct: 394 CKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNT 453

Query: 479 SVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDD 538
            ++  LI   CK E+ +   RL   M   G   D + Y  L      A   +    + D 
Sbjct: 454 VIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFDG 513

Query: 539 M 539
           M
Sbjct: 514 M 514



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 110/377 (29%), Positives = 183/377 (48%), Gaps = 10/377 (2%)

Query: 170 VLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFK 229
            LL+ L   R  D   +++K+++      N H YNVLI   CK   + +   +  +M+  
Sbjct: 2   ALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSS 61

Query: 230 DVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA 289
            +  +  T NTL+   C+ G    AL +   M+     P   ++N L+ GF   GR+R+A
Sbjct: 62  GLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRDA 121

Query: 290 RRLFRDIKGATPNHV--TYTTLIDGYC----RANDLEEALRLREVMAAKGVYPGVVTYNS 343
               +D++ ++ +    TY  ++ G C     AN LE+A+   + M A GV P + +Y+ 
Sbjct: 122 LAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYHI 181

Query: 344 ILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAG 403
           +L  L   GR+ +A+ L + M     +PD +T N L++ YCKIG T  A  +   +L+AG
Sbjct: 182 LLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAG 238

Query: 404 LMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALL 463
              + FTY  +I+ +CK  +++ A E+   M+++   P+  +++ L+ G+C     E  +
Sbjct: 239 YEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAI 298

Query: 464 KLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDY-AQRLFNLMQGNGILGDSVIYTSLAYA 522
           KL  E    G    +  Y  LI   CKK    Y A  LFN ++G G+    V Y SL   
Sbjct: 299 KLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQG 358

Query: 523 YWRAGEPKACSDILDDM 539
           +  A          D+M
Sbjct: 359 FCDARRLSEAMQYFDEM 375



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 109/409 (26%), Positives = 177/409 (43%), Gaps = 9/409 (2%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N+H  + L+  +         + VF  M+   L+P+      LL  L +        K++
Sbjct: 31  NAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALKLF 90

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYC-- 246
           ++M     +     +N+L+     +  V      L +M          TYN ++   C  
Sbjct: 91  REMQAGPFLPTSASHNILLRGFFMAGRVRDALAHLQDMRKSSSSVATGTYNLVLKGLCWE 150

Query: 247 -KKGMHYE-ALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGATPNHV 304
            K     E A+     M+  G+ PD+ +Y+ L+      GRM EA  LF  +   +P+ +
Sbjct: 151 NKSANRLEQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAMT-CSPDIM 209

Query: 305 TYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM 364
           TY  L+DGYC+     EA  L + +   G  P V TY+ I+   CK  ++ +A  +  +M
Sbjct: 210 TYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKM 269

Query: 365 NEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEM 424
            E    P+ VT NTLI  +CK G    A+K+   M + G      TY  LI   CK +  
Sbjct: 270 IESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGG 329

Query: 425 DIAKELLFGMLD-AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCV-DVSVYR 482
                 LF  L+ AG +P+  +Y+ L+ G+C+       ++  DE    G C  +V  Y 
Sbjct: 330 VYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEM--EGKCAPNVITYS 387

Query: 483 ALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKA 531
            LI   CK  ++  A +    M+ +G     V Y  L   + + GE K+
Sbjct: 388 ILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKS 436



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 89/328 (27%), Positives = 146/328 (44%), Gaps = 9/328 (2%)

Query: 239 NTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK- 297
           N L++       H +AL +   +     +P+  TYN LI GFC+ G+M +A  +F D+K 
Sbjct: 1   NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKS 60

Query: 298 -GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRD 356
            G  PN  T  TL+ G C    +  AL+L   M A    P   ++N +LR     GR+RD
Sbjct: 61  SGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRD 120

Query: 357 ANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTAS----AMKVKNRMLEAGLMLDQFTYK 412
           A   L +M +   +    T N ++   C    +A+    AM+    M  +G+  D  +Y 
Sbjct: 121 ALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYH 180

Query: 413 ALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSR 472
            L+     +  M  A  L   M     SP   +Y+ L+DGYC          L+ E +  
Sbjct: 181 ILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKA 237

Query: 473 GLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKAC 532
           G   +V  Y  +I  +CK +KV+ A  +F  M  +  + ++V + +L   + +AG  +  
Sbjct: 238 GYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDA 297

Query: 533 SDILDDMYRRRLMITLKIYRSFSASYAK 560
             +  +M +     T+  Y +   S  K
Sbjct: 298 IKLFAEMEKIGCKATIVTYNTLIDSLCK 325


>gi|255570422|ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534547|gb|EEF36246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 504

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 112/412 (27%), Positives = 216/412 (52%), Gaps = 7/412 (1%)

Query: 170 VLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFK 229
           ++++SL KD L     K++++M+ +G+  N+ +Y+ LI+  C+   + +   L  EM  +
Sbjct: 84  LVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLCRVGKLREAVNLFDEMVSQ 143

Query: 230 DVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA 289
            ++A++ TYN+LI   C+ G+  EA     +M  EGI PD+VT+ +LI    ++G+++EA
Sbjct: 144 GIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVTFTTLIDHLSKKGKVQEA 203

Query: 290 RRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRK 347
            ++F  +  +G  PN VTY +L++G C  + ++ A+RL EVM  +G+   V++YN+++  
Sbjct: 204 YKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLING 263

Query: 348 LCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLD 407
            C  G+  +A  L  +M  +++ P   T   L+ A  + G   +A ++ N M   G    
Sbjct: 264 YCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKELFNNMQICGQSPS 323

Query: 408 QFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLD 467
             TY  L+ G CK   ++ A ++   +    + PS   YS L+ G       E+ +++ D
Sbjct: 324 LDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAMEIFD 383

Query: 468 EFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
           E  + GL  ++  Y  +I   CK+ K+  A+RLF  M+ +G   D + +  +   + +  
Sbjct: 384 EIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEESGCEQDEISFNFIIRGFLQEN 443

Query: 528 EPKACSDILDDMYRRRL----MITLKIYRSFSASYAKDNEILDLFWSHVVDR 575
           + +   + L  M  +       +TL +   ++A  A+ +E+ + F   +V +
Sbjct: 444 QVQKAMEFLKRMREKNFSPNDSVTLMLVNLYAAD-AQSSELPNNFLHELVQK 494



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 90/328 (27%), Positives = 171/328 (52%), Gaps = 4/328 (1%)

Query: 130 SHVLSWLVIFYANLKMT--QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKV 187
           ++V+++  + +A+ +    ++  + F QM    ++P +   T L++ L+K       +K+
Sbjct: 147 ANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVTFTTLIDHLSKKGKVQEAYKI 206

Query: 188 YKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCK 247
           ++ M++ G   NI  YN L++  C    +D   +L   M  + ++ D+ +YNTLI  YC 
Sbjct: 207 FELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLINGYCT 266

Query: 248 KGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVT 305
            G   EA+ +  +M+ E ++P I TY  L+    + GR+R A+ LF +++  G +P+  T
Sbjct: 267 SGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKELFNNMQICGQSPSLDT 326

Query: 306 YTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMN 365
           YT L+DG C+   +EEA+ +   + +    P +  Y+ ++  + +  R   A  + +E+ 
Sbjct: 327 YTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAMEIFDEIP 386

Query: 366 EKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMD 425
              + P+ VT N +IN  CK G    A ++  +M E+G   D+ ++  +I GF +  ++ 
Sbjct: 387 TVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEESGCEQDEISFNFIIRGFLQENQVQ 446

Query: 426 IAKELLFGMLDAGFSPSYCSYSWLVDGY 453
            A E L  M +  FSP+      LV+ Y
Sbjct: 447 KAMEFLKRMREKNFSPNDSVTLMLVNLY 474



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 99/359 (27%), Positives = 167/359 (46%), Gaps = 2/359 (0%)

Query: 195 GVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEA 254
           G   N+   + L+   C    V    +L  +M     + D+  Y  LI    K      A
Sbjct: 4   GYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQARRA 63

Query: 255 LAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDG 312
           + +  RM  E  S +  TY  +I   C++G   +  ++FR++   G  PN + Y++LI+G
Sbjct: 64  VELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLING 123

Query: 313 YCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPD 372
            CR   L EA+ L + M ++G+   V+TYNS++   C+ G  ++A R  ++M  + I PD
Sbjct: 124 LCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPD 183

Query: 373 NVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLF 432
            VT  TLI+   K G    A K+   M++ G   +  TY +L++G C   +MD A  L  
Sbjct: 184 VVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFE 243

Query: 433 GMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKE 492
            M++ G      SY+ L++GYC     E  + L  +     L   ++ Y  L++   +  
Sbjct: 244 VMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNG 303

Query: 493 KVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIY 551
           ++  A+ LFN MQ  G       YT L     + G  +   D+   +   +   +++IY
Sbjct: 304 RIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIY 362



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/375 (26%), Positives = 170/375 (45%), Gaps = 39/375 (10%)

Query: 149 GLQVFDQMRVHNLMPHLHACTVLLNSLAK-DRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           GL++F +M    + P++   + L+N L +  +L + V  ++ +MV  G+ AN+  YN LI
Sbjct: 98  GLKMFREMINMGICPNVIVYSSLINGLCRVGKLREAV-NLFDEMVSQGIKANVITYNSLI 156

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           HA C+     +  +   +M  + +  D+ T+ TLI    KKG   EA  + + M ++G +
Sbjct: 157 HASCRFGLWKEATRTFSQMVGEGILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEA 216

Query: 268 PDIVTYNSL-----------------------------------IHGFCREGRMREARRL 292
           P+IVTYNSL                                   I+G+C  G+  EA  L
Sbjct: 217 PNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTL 276

Query: 293 FRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
           FR ++    TP+  TYT L+    +   +  A  L   M   G  P + TY  +L  LCK
Sbjct: 277 FRKMQYEELTPSITTYTILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCK 336

Query: 351 EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
            G I +A  +   +   K  P     + LI    +     SAM++ + +   GL+ +  T
Sbjct: 337 NGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVT 396

Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFV 470
           Y  +I+G CK  ++  A+ L   M ++G      S+++++ G+  +N  +  ++ L    
Sbjct: 397 YNIMINGLCKEGKLLEAERLFVQMEESGCEQDEISFNFIIRGFLQENQVQKAMEFLKRMR 456

Query: 471 SRGLCVDVSVYRALI 485
            +    + SV   L+
Sbjct: 457 EKNFSPNDSVTLMLV 471



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 81/314 (25%), Positives = 148/314 (47%), Gaps = 37/314 (11%)

Query: 263 REGISPDIVTYNSLIHGFCREGRMREARRLF----------------------RDIKGA- 299
           + G  P++VT ++L+ G C EG++ +A  LF                      R  + A 
Sbjct: 2   KSGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQAR 61

Query: 300 --------------TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSIL 345
                         + N  TY  +ID  C+     + L++   M   G+ P V+ Y+S++
Sbjct: 62  RAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLI 121

Query: 346 RKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLM 405
             LC+ G++R+A  L +EM  + I  + +T N+LI+A C+ G    A +  ++M+  G++
Sbjct: 122 NGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGIL 181

Query: 406 LDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKL 465
            D  T+  LI    K  ++  A ++   M+  G +P+  +Y+ L++G C  +  +  ++L
Sbjct: 182 PDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRL 241

Query: 466 LDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWR 525
            +  V RG+ +DV  Y  LI  +C   K + A  LF  MQ   +      YT L  A ++
Sbjct: 242 FEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQ 301

Query: 526 AGEPKACSDILDDM 539
            G  +   ++ ++M
Sbjct: 302 NGRIRTAKELFNNM 315


>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 827

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 130/495 (26%), Positives = 231/495 (46%), Gaps = 25/495 (5%)

Query: 80  SHWTMIHILTKNKHFKSAQN----MLEKIALRDFLSTPSVLNALVKIHD----------- 124
           S  T+IH   K      A N    M++K  + D  +  S+++AL K              
Sbjct: 234 SFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQM 293

Query: 125 -----DPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDR 179
                +PDG ++  + ++  Y+     ++  ++F +M    L+P     +  ++SL K  
Sbjct: 294 VDKGVEPDGVTY--NAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHG 351

Query: 180 LTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYN 239
            +    ++++ M   G + +I  Y++L+H          +  L   M  K + ++    N
Sbjct: 352 RSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCIN 411

Query: 240 TLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK-- 297
            LI+ + K+GM  EA+ V   M+ +G+ P++VTY++LI  FCR GR+ +A   F  +   
Sbjct: 412 ILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISI 471

Query: 298 GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVY-PGVVTYNSILRKLCKEGRIRD 356
           G  PN   Y +LI G+C   DL +A      M +KG++ P +V ++SI+  LC EGR+ D
Sbjct: 472 GIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMD 531

Query: 357 ANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIH 416
           A  + N +      P  VT N+LI+ YC +G    A  V + M+  G+  D  T   L+ 
Sbjct: 532 AQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVS 591

Query: 417 GFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCV 476
           G+CK+ ++D    L   ML     P+  +Y+ ++DG        A  K+  E +  G  V
Sbjct: 592 GYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAV 651

Query: 477 DVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDIL 536
           D+  Y+ L++  C+ +  D A  LF+ +       D  I  ++  A ++    +  +D+ 
Sbjct: 652 DIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDLF 711

Query: 537 DDMYRRRLMITLKIY 551
             +    L+  +  Y
Sbjct: 712 AAISTSGLVPNVSTY 726



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 118/404 (29%), Positives = 196/404 (48%), Gaps = 44/404 (10%)

Query: 146 TQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKD-RLTDMVWKVYKKMVQLGVVANIHLYN 204
           ++D  ++F  M     MP + + ++LL+  A + R  DM   ++  M   G+V+N H  N
Sbjct: 353 SKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADM-NNLFHSMADKGIVSNCHCIN 411

Query: 205 VLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMERE 264
           +LI A  K   +D+   +  EM+ + VR ++ TY+TLI+ +C+ G   +A+    +M   
Sbjct: 412 ILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISI 471

Query: 265 GISPDIVTYNSLIHGFCR------------------------------------EGRMRE 288
           GI P+   Y+SLIHGFC                                     EGR+ +
Sbjct: 472 GIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMD 531

Query: 289 ARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILR 346
           A+ +F  +   G  P  VT+ +LIDGYC    +E+A  + + M + G+ P VVT N+++ 
Sbjct: 532 AQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVS 591

Query: 347 KLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLML 406
             CK G+I D   L  EM  KK+ P  VT N +++   + G T++A K+ + M+++G  +
Sbjct: 592 GYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAV 651

Query: 407 DQFTYKALIHGFCKAKEMDIAKELL--FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLK 464
           D  TYK L+ G C+    D A  L    G +D  F  +    + +++        E    
Sbjct: 652 DIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITI--LNTMINALYKVRRREEAND 709

Query: 465 LLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG 508
           L     + GL  +VS Y  +IR   K+  V+ A  +F+ M+ +G
Sbjct: 710 LFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSG 753



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 122/477 (25%), Positives = 222/477 (46%), Gaps = 20/477 (4%)

Query: 80  SHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIF 139
           S+ T+I  L  +   + A +M++++A      +P V++    IH               F
Sbjct: 197 SYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHG--------------F 242

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
           +   ++++    +F++M    ++P +     ++++L K R  D    V ++MV  GV  +
Sbjct: 243 FKQGEVSK-ACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPD 301

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
              YN +IH    S    +  K+  +M  K +  D  T+++ ++  CK G   +A  +  
Sbjct: 302 GVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQ 361

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRAN 317
            M  +G  PDIV+Y+ L+HG+  EGR  +   LF  +  KG   N      LI  + +  
Sbjct: 362 YMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRG 421

Query: 318 DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCN 377
            ++EA+ +   M  +GV P VVTY++++   C+ GR+ DA    ++M    I P+    +
Sbjct: 422 MMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYH 481

Query: 378 TLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT-YKALIHGFC-KAKEMDIAKELLFGML 435
           +LI+ +C  GD   A +  + M+  GL       + ++IH  C + + MD A+++   ++
Sbjct: 482 SLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMD-AQDVFNLVI 540

Query: 436 DAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVD 495
             G  P+  +++ L+DGYC     E    +LD  VS G+  DV     L+  +CK  K+D
Sbjct: 541 HIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKID 600

Query: 496 YAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYR 552
               LF  M    +   +V Y  +     RAG   A   +  +M      + +  Y+
Sbjct: 601 DGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYK 657



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 120/459 (26%), Positives = 200/459 (43%), Gaps = 53/459 (11%)

Query: 169 TVLLNSLAKDRLTDMVWKVY-KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEME 227
           T  L  L   + TD    V   +M +L  V +   YN +I + C  S   +   ++  M 
Sbjct: 163 TTFLKCLCHAKRTDEAVDVLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMA 222

Query: 228 FKDVR--ADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGR 285
            +  R   D+ ++NT+I  + K+G   +A  + + M ++G+ PD+ TYNS++   C+   
Sbjct: 223 KEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARA 282

Query: 286 MREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNS 343
           M +A  + R +  KG  P+ VTY  +I GY  +   +E+ ++   M +KG+ P  VT++S
Sbjct: 283 MDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSS 342

Query: 344 ILRKLCKEGRIRDANRLLNEMNEKKIAPDNVT---------------------------- 375
            +  LCK GR +DA  +   M  K   PD V+                            
Sbjct: 343 FMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKG 402

Query: 376 -------CNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAK 428
                   N LI+A+ K G    AM V   M   G+  +  TY  LI  FC+   +  A 
Sbjct: 403 IVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAM 462

Query: 429 ELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLC-VDVSVYRALIRR 487
           E    M+  G  P+   Y  L+ G+C   +     + + E +S+GL   ++  + ++I  
Sbjct: 463 EKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHS 522

Query: 488 FCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMIT 547
            C + +V  AQ +FNL+   G     V + SL   Y   G+ +    +LD M    +   
Sbjct: 523 LCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPD 582

Query: 548 LKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKEM 586
           +    +  + Y K  +I         D GL+   +F+EM
Sbjct: 583 VVTNNTLVSGYCKSGKI---------DDGLI---LFREM 609



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 104/397 (26%), Positives = 178/397 (44%), Gaps = 19/397 (4%)

Query: 199 NIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQ 258
            +  Y +L+  CC++   D     +  +    ++       T +   C      EA+ V 
Sbjct: 123 TVRTYGILMDCCCRARRPDLGPAFVARLLRAGLKTGTIQATTFLKCLCHAKRTDEAVDVL 182

Query: 259 -DRMEREGISPDIVTYNSLIHGFCREGRMREA----RRLFRDIKGATPNHVTYTTLIDGY 313
             RM      PD ++YN++I   C + R +EA    +R+ ++    +P+ V++ T+I G+
Sbjct: 183 LHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGF 242

Query: 314 CRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDN 373
            +  ++ +A  L   M  KGV P V TYNSI+  LCK   +  A  +L +M +K + PD 
Sbjct: 243 FKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDG 302

Query: 374 VTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFG 433
           VT N +I+ Y   G    + K+  +M   GL+ D  T+ + +   CK      A+E+   
Sbjct: 303 VTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQY 362

Query: 434 MLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEK 493
           M   G  P   SYS L+ GY  +     +  L      +G+  +      LI    K+  
Sbjct: 363 MTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGM 422

Query: 494 VDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKI--- 550
           +D A  +F  MQG G+  + V Y++L  A+ R G       + D M +   MI++ I   
Sbjct: 423 MDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGR------LADAMEKFSQMISIGIEPN 476

Query: 551 ---YRSFSASYAKDNEILDL--FWSHVVDRGLMSKHI 582
              Y S    +    +++    F S ++ +GL   +I
Sbjct: 477 TAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNI 513



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 89/374 (23%), Positives = 148/374 (39%), Gaps = 112/374 (29%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAK-DRLTDMVWKV 187
           N H ++ L+  +A   M  + + VF +M+   + P++   + L+++  +  RL D + K 
Sbjct: 406 NCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEK- 464

Query: 188 YKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEM--------------------- 226
           + +M+ +G+  N  +Y+ LIH  C   D+ K ++ + EM                     
Sbjct: 465 FSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLC 524

Query: 227 ------EFKDV---------RADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
                 + +DV         R  + T+N+LI  YC  G   +A  V D M   GI PD+V
Sbjct: 525 IEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVV 584

Query: 272 TYNSLIHGFCREGRMREARRLFRDI--KGATPNHVT------------------------ 305
           T N+L+ G+C+ G++ +   LFR++  K   P  VT                        
Sbjct: 585 TNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEM 644

Query: 306 -----------YTTLIDGYCRANDL----------------------------------- 319
                      Y  L+ G CR NDL                                   
Sbjct: 645 IDSGTAVDIDTYKILLKGLCR-NDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRR 703

Query: 320 -EEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT 378
            EEA  L   ++  G+ P V TY  ++R L KEG + +A+ + + M +   AP +   N 
Sbjct: 704 REEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSGCAPSSRLLND 763

Query: 379 LINAYCKIGDTASA 392
           +I    + GD   A
Sbjct: 764 IIRMLLQKGDIVKA 777



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 61/275 (22%), Positives = 113/275 (41%), Gaps = 4/275 (1%)

Query: 115 VLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNS 174
           V N ++ I D P       + L+  Y  +   +    V D M    + P +     L++ 
Sbjct: 535 VFNLVIHIGDRP--TIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSG 592

Query: 175 LAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRAD 234
             K    D    ++++M+   V      YN+++    ++      +K+  EM       D
Sbjct: 593 YCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVD 652

Query: 235 LFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR 294
           + TY  L+   C+  +  EA+ +  ++       DI   N++I+   +  R  EA  LF 
Sbjct: 653 IDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDLFA 712

Query: 295 DIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEG 352
            I   G  PN  TY  +I    +   +EEA  +   M   G  P     N I+R L ++G
Sbjct: 713 AISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKG 772

Query: 353 RIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
            I  A   +++++   I+ +  T + L++ +   G
Sbjct: 773 DIVKAGYYMSKVDGTIISLEASTTSLLMSLFSSKG 807


>gi|357438845|ref|XP_003589699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478747|gb|AES59950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 806

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 129/502 (25%), Positives = 236/502 (47%), Gaps = 25/502 (4%)

Query: 60  SCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNAL 119
           S  +FK + S    +KH+  ++ TMI  L +N        +L+++ L +   +  +   +
Sbjct: 57  SLEYFK-SLSNSGTFKHTHLTYETMIDKLGRNNEMDGVSYLLQQMKLENVPCSQELFQFV 115

Query: 120 VKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDR 179
           +K                  Y    + + GL++F ++R     P +    ++L++L    
Sbjct: 116 IKC-----------------YRRSNLGEQGLKMFYRIREFGCEPSVKIYNLVLDALLSQN 158

Query: 180 LTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYN 239
           L  M+  +Y  M   G+  N+  YNVL+ A C++  VD   KLL EM  K    D  +Y 
Sbjct: 159 LFKMINALYNNMKSEGLEPNVFTYNVLLKALCQNGKVDGACKLLVEMSNKGCDPDDVSYT 218

Query: 240 TLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--K 297
           T+I+  CK G   +A  +  + E     P +  YN+LIHG C+E R +EA  L  ++  +
Sbjct: 219 TVISSMCKLGDVDKARELAMKFE-----PVVPVYNALIHGVCKECRFKEAFDLMNEMVDR 273

Query: 298 GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDA 357
           G  PN ++Y+T+I       ++E +L +   M  +G  P V T+ S+++     GR+ DA
Sbjct: 274 GVDPNVISYSTVISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDA 333

Query: 358 NRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHG 417
             L N M  + ++P+ V  NTLI+  C  G+   A+ V N+M +  +  +  TY  +I+G
Sbjct: 334 VGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYG 393

Query: 418 FCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVD 477
           F K+ ++  A E    M++ G  P+   Y+ +VD  C  +  +    L+D  +S G    
Sbjct: 394 FAKSGDLVSACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPT 453

Query: 478 VSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILD 537
           V  +   I+  C+  +V++A  + + M+    L +   Y  L    +RA   +    ++ 
Sbjct: 454 VITFNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNIRTYNELLDGLFRANAFREACGLIR 513

Query: 538 DMYRRRLMITLKIYRSFSASYA 559
           ++  R++      Y +    ++
Sbjct: 514 ELEERKVEFDCVTYNTIMYGFS 535



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 109/428 (25%), Positives = 200/428 (46%), Gaps = 29/428 (6%)

Query: 68  ESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPD 127
           E  VP Y         +IH + K   FK A +++ ++  R     P+V++          
Sbjct: 241 EPVVPVYN-------ALIHGVCKECRFKEAFDLMNEMVDRGV--DPNVISY--------- 282

Query: 128 GNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSL-AKDRLTDMVWK 186
             S V+S L    +++   +  L VF +M V    P++   T L+     + R+ D V  
Sbjct: 283 --STVISCL----SDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAV-G 335

Query: 187 VYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYC 246
           ++  M++ GV  N+  YN LIH  C   ++D+   +  +ME   +R ++ TY+T+I  + 
Sbjct: 336 LWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFA 395

Query: 247 KKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHV 304
           K G    A    ++M   G  P++V Y  ++   C+     +A  L  ++   G  P  +
Sbjct: 396 KSGDLVSACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVI 455

Query: 305 TYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM 364
           T+   I G CRA  +E A+ + + M      P + TYN +L  L +    R+A  L+ E+
Sbjct: 456 TFNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNIRTYNELLDGLFRANAFREACGLIREL 515

Query: 365 NEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEM 424
            E+K+  D VT NT++  +   G     +++  +ML  G+ LD  T    ++ +CK  ++
Sbjct: 516 EERKVEFDCVTYNTIMYGFSFNGMHQQVLQLLGKMLVNGIKLDTITVNTTVNAYCKLGKV 575

Query: 425 DIAKELLFGM-LDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRA 483
             A ++L  +  +  F     +++ ++ G CN    E  +  L E + RG+  +++ +  
Sbjct: 576 KTAIKVLDNISAEKEFRADIITHTIILWGICNWLGTEEAVVYLHEMLKRGIFPNIATWNV 635

Query: 484 LIRRFCKK 491
           L+R F  K
Sbjct: 636 LVRGFFSK 643



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 96/392 (24%), Positives = 171/392 (43%), Gaps = 41/392 (10%)

Query: 188 YKKMVQLGVVANIHL-YNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYC 246
           +K +   G   + HL Y  +I    +++++D V  LL +M+ ++V      +  +I  Y 
Sbjct: 61  FKSLSNSGTFKHTHLTYETMIDKLGRNNEMDGVSYLLQQMKLENVPCSQELFQFVIKCYR 120

Query: 247 KKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGATPNHVTY 306
           +  +  + L +  R+   G  P +  YN ++           ++ LF+ I     N    
Sbjct: 121 RSNLGEQGLKMFYRIREFGCEPSVKIYNLVLDALL-------SQNLFKMINALYNN---- 169

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
                                 M ++G+ P V TYN +L+ LC+ G++  A +LL EM+ 
Sbjct: 170 ----------------------MKSEGLEPNVFTYNVLLKALCQNGKVDGACKLLVEMSN 207

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
           K   PD+V+  T+I++ CK+GD   A     R L          Y ALIHG CK      
Sbjct: 208 KGCDPDDVSYTTVISSMCKLGDVDKA-----RELAMKFEPVVPVYNALIHGVCKECRFKE 262

Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
           A +L+  M+D G  P+  SYS ++    +  N E  L +      RG   +V  + +LI+
Sbjct: 263 AFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIK 322

Query: 487 RFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMI 546
            F  + +V  A  L+NLM   G+  + V Y +L +     G       + + M +  +  
Sbjct: 323 GFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRP 382

Query: 547 TLKIYRSFSASYAKDNEILDL--FWSHVVDRG 576
            +  Y +    +AK  +++     W+ +++ G
Sbjct: 383 NVTTYSTIIYGFAKSGDLVSACETWNKMINCG 414



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 73/315 (23%), Positives = 135/315 (42%), Gaps = 33/315 (10%)

Query: 68  ESAVPNYKHSLQSHWTMIHILTKNKHFKSA---QNMLEKIALR----------------- 107
           E   PN    + ++ T+IH L  + +   A    N +EK ++R                 
Sbjct: 343 EGVSPN----VVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSG 398

Query: 108 DFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHA 167
           D +S     N ++     P  N  V + +V     + M      + D M      P +  
Sbjct: 399 DLVSACETWNKMINCGCRP--NVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVIT 456

Query: 168 CTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEME 227
               +  L +    +    V  +M +   + NI  YN L+    +++   +   L+ E+E
Sbjct: 457 FNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNIRTYNELLDGLFRANAFREACGLIRELE 516

Query: 228 FKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMR 287
            + V  D  TYNT++  +   GMH + L +  +M   GI  D +T N+ ++ +C+ G+++
Sbjct: 517 ERKVEFDCVTYNTIMYGFSFNGMHQQVLQLLGKMLVNGIKLDTITVNTTVNAYCKLGKVK 576

Query: 288 EARRLFRDI---KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSI 344
            A ++  +I   K    + +T+T ++ G C     EEA+     M  +G++P + T+N +
Sbjct: 577 TAIKVLDNISAEKEFRADIITHTIILWGICNWLGTEEAVVYLHEMLKRGIFPNIATWNVL 636

Query: 345 LR----KLCKEGRIR 355
           +R    KL   G IR
Sbjct: 637 VRGFFSKLGHMGPIR 651


>gi|147866209|emb|CAN83683.1| hypothetical protein VITISV_017537 [Vitis vinifera]
          Length = 833

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 141/507 (27%), Positives = 229/507 (45%), Gaps = 37/507 (7%)

Query: 59  LSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNA 118
           L   FFKW      +Y + L     ++ +L     F  AQ    K  +          N 
Sbjct: 19  LGVRFFKWV-CRQSSYCYDLDGRIQLLGVLVSRDLFGVAQ----KAVVLLIQECEDSENG 73

Query: 119 LVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHAC-TVLLNSLAK 177
           +VK+    DG                MT+ G ++             + C + LL  LAK
Sbjct: 74  VVKLMGALDG----------------MTELGFRLS------------YPCYSTLLMCLAK 105

Query: 178 DRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFT 237
             +  + + VY++MV  G V     Y  +++A CK+  V   E   C++       D   
Sbjct: 106 LNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHV 165

Query: 238 YNTLIALYCKKGMHYEALAVQDRMERE-GISPDIVTYNSLIHGFCREGRMREARRLFRDI 296
             +L+   C++    EA  V ++M +E    P+ VTY+ LIHG C  GR+ EA +L +++
Sbjct: 166 CTSLVLANCRRDDLGEAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEM 225

Query: 297 --KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRI 354
             KG  P+  TYT LI   C     ++A+++ + MA K   P V TY  ++ +LC+EG+I
Sbjct: 226 VEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKI 285

Query: 355 RDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKAL 414
            +AN +  +M +  + P  +T N LIN YCK G   SA ++ + M +     +  TY  L
Sbjct: 286 EEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNEL 345

Query: 415 IHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGL 474
           + G C+  +   A  LL  ++D G  P   +Y+ LVDG+C +        + +   S GL
Sbjct: 346 MEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGL 405

Query: 475 CVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSD 534
             D   + ALI   CK  +++ A  +   M   GI  D V +T+L   + + G+ K    
Sbjct: 406 EPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCF 465

Query: 535 ILDDMYRRRLMITLKIYRSFSASYAKD 561
           + ++M   R + T   +  F  +  KD
Sbjct: 466 LFENMVENRCLTTAHTFNCFLDALGKD 492



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 134/511 (26%), Positives = 227/511 (44%), Gaps = 51/511 (9%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQM-RVHNLMPHLHACTVLLNSLAKDRLTDMVWKV 187
           ++HV + LV+         +  +VF++M +  +  P+    ++L++ L +    +  +++
Sbjct: 162 DTHVCTSLVLANCRRDDLGEAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQL 221

Query: 188 YKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCK 247
            ++MV+ G   +   Y VLI A C     DK  K+L EM  K    ++ TY  LI   C+
Sbjct: 222 KQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCR 281

Query: 248 KGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGAT--PNHVT 305
           +G   EA  V  +M + G+ P I+T+N+LI+G+C+EG +  A +L   ++     PN  T
Sbjct: 282 EGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRT 341

Query: 306 YTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMN 365
           Y  L++G CR +   +A  L   +   G+ P  VTYN ++   CKEG++  A  + N MN
Sbjct: 342 YNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMN 401

Query: 366 EKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCK-AKEM 424
              + PD  T   LI+  CK+G    A  +   M++ G+ LD+ T+ ALI G CK  K  
Sbjct: 402 SAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAK 461

Query: 425 DI----------------------------------AKELLFGMLDAGFSPSYCSYSWLV 450
           D+                                  A  +L  M+  G  PS  +++ L+
Sbjct: 462 DVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILI 521

Query: 451 DGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGIL 510
           +G+C        LK+L+     G   +V  Y  +I   C   +V+ A+ +   M   G+ 
Sbjct: 522 EGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVS 581

Query: 511 GDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEIL----- 565
            +   Y  L  A+ +AG       I+  M +        IY +  + +   N  +     
Sbjct: 582 PNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARAL 641

Query: 566 ----DL----FWSHVVDRGLMSKHIFKEMQL 588
               DL      S   D   +S H+F+ M +
Sbjct: 642 SSTGDLDARSLSSEENDNNCLSSHVFRLMDV 672



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 94/377 (24%), Positives = 166/377 (44%), Gaps = 44/377 (11%)

Query: 169 TVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEF 228
           T L++   K      V  +++ MV+   +   H +N  + A  K   +++   +L +M  
Sbjct: 448 TALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMK 507

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
             +   + T+  LI  +C+ G    +L + +RM++ G SP++ TY  +I+G C  GR+ E
Sbjct: 508 YGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEE 567

Query: 289 ARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSIL- 345
           A  +   +   G +PNH TY  L+  + +A  L+ A ++   M   G  P    Y+++L 
Sbjct: 568 AETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLS 627

Query: 346 -----------RKLCKEGRIRDANRLLNEMNEK-----------------KIAPDNVTC- 376
                      R L   G + DA  L +E N+                  KI  +   C 
Sbjct: 628 GFVLSNTAIGARALSSTGDL-DARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIKKCG 686

Query: 377 -------NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKE 429
                  N L+   CK G    A ++   M++ GL  D+    ++I  +CK  + D   E
Sbjct: 687 VPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDK-AISSIIEHYCKTCKYDNCLE 745

Query: 430 LLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSR-GLCVDVSVYRALIRRF 488
            +  +LD  F PS+ SY W++ G  N+   +   KL+ + V   G+  +V V  ++   F
Sbjct: 746 FMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLVRHTGIEEEVEVTPSI--EF 803

Query: 489 CKKEKVDYAQRLFNLMQ 505
             KE+ D   +   L++
Sbjct: 804 LMKEEEDDPDKCLKLIK 820



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 68/280 (24%), Positives = 124/280 (44%), Gaps = 3/280 (1%)

Query: 306 YTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMN 365
           Y+TL+    + N    A  +   M  +G   G + Y +++  LCK G ++ A     ++ 
Sbjct: 96  YSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVL 155

Query: 366 EKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML-EAGLMLDQFTYKALIHGFCKAKEM 424
                 D   C +L+ A C+  D   A +V  +M  E     +  TY  LIHG C+A  +
Sbjct: 156 RLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRL 215

Query: 425 DIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRAL 484
           + A +L   M++ G  PS  +Y+ L+   C+    +  +K+LDE  ++    +V  Y  L
Sbjct: 216 EEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTIL 275

Query: 485 IRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL 544
           I R C++ K++ A  +F  M  +G+    + + +L   Y + G   +   +L  M +   
Sbjct: 276 IDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNC 335

Query: 545 MITLKIYRSFSASYAKDNEILDLF--WSHVVDRGLMSKHI 582
              ++ Y        + ++    F     VVD GL+   +
Sbjct: 336 KPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRV 375


>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
 gi|224030695|gb|ACN34423.1| unknown [Zea mays]
 gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
          Length = 756

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 122/418 (29%), Positives = 192/418 (45%), Gaps = 4/418 (0%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           + ++M  H + P     T L+    ++   +   +V  KM++ G        NVLI+  C
Sbjct: 217 MLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYC 276

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           K   V+     + +        D  TYNT +   C+ G    AL V D M +EG  PD+ 
Sbjct: 277 KMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVF 336

Query: 272 TYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           TYN++I+   + G + EA+ +   +  +G  P+  T+ TLI   C  N LEEAL L   +
Sbjct: 337 TYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLAREL 396

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
             KG+ P V T+N ++  LCK G      RL  EM     APD VT N LI+  C +G  
Sbjct: 397 TVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKL 456

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA-GFSPSYCSYSW 448
            +A+ +   M   G      TY  +I   CK   ++ A+E +F  +DA G S S  +++ 
Sbjct: 457 VNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEE-VFDQMDAHGISRSAVTFNT 515

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG 508
           L+DG C     +   +L+++ V  GL      Y +++  +CK+  +  A  +   M  NG
Sbjct: 516 LIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANG 575

Query: 509 ILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
              D V Y +L     +AG  +    +L  M  + +  T K Y     S  + N + D
Sbjct: 576 FEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRD 633



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 111/361 (30%), Positives = 179/361 (49%), Gaps = 7/361 (1%)

Query: 149 GLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIH 208
            L+V D M      P +     ++N L+K+   D    +  +MV  G + +   +N LI 
Sbjct: 319 ALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIV 378

Query: 209 ACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISP 268
           A C  + +++   L  E+  K +  D++T+N LI   CK G  +  + + + M+  G +P
Sbjct: 379 ALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAP 438

Query: 269 DIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLR 326
           D VTYN LI   C  G++  A  L ++++  G   + VTY T+ID  C+   +EEA  + 
Sbjct: 439 DEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVF 498

Query: 327 EVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKI 386
           + M A G+    VT+N+++  LCK  RI DA  L+ +M ++ + P N+T N+++  YCK 
Sbjct: 499 DQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQ 558

Query: 387 GDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSY 446
           GD   A  +   M   G  +D  TY  LI+G CKA    +A +LL GM   G  P+  +Y
Sbjct: 559 GDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAY 618

Query: 447 SWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCK-----KEKVDYAQRLF 501
           + ++     +NN    L L  E    G   D   Y+ + R  C+     KE  D+   + 
Sbjct: 619 NPVIQSLFRRNNLRDALSLFREMTEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFLVEMV 678

Query: 502 N 502
           N
Sbjct: 679 N 679



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 121/441 (27%), Positives = 207/441 (46%), Gaps = 3/441 (0%)

Query: 127 DGNSHVLSWLVIFYANLKMTQDGLQ-VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVW 185
           +  + V+   V  YA L+   D +  V +Q+    +         LLN LA+     ++ 
Sbjct: 121 EAGAGVVRSFVESYARLRRFDDAVDLVRNQLNTFGVQADTAVYNHLLNVLAEGSRMKLLE 180

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
            VY +M   G+  ++   N LI A C++  V     +L EM    V  D  T+ TL+  +
Sbjct: 181 SVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGF 240

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNH 303
            ++G    AL V+ +M   G SP  VT N LI+G+C+ GR+ +A    +     G  P+ 
Sbjct: 241 IEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQ 300

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
           VTY T +   C+   +  AL++ ++M  +G  P V TYN+++  L K G + +A  ++N+
Sbjct: 301 VTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQ 360

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
           M ++   PD  T NTLI A C       A+ +   +   GL  D +T+  LI+  CK  +
Sbjct: 361 MVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGD 420

Query: 424 MDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRA 483
             +   L   M  +G +P   +Y+ L+D  C+       L LL E  S G       Y  
Sbjct: 421 PHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNT 480

Query: 484 LIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRR 543
           +I   CK+ +++ A+ +F+ M  +GI   +V + +L     +A      +++++ M +  
Sbjct: 481 IIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEG 540

Query: 544 LMITLKIYRSFSASYAKDNEI 564
           L  +   Y S    Y K  ++
Sbjct: 541 LQPSNITYNSILTHYCKQGDL 561



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 129/435 (29%), Positives = 202/435 (46%), Gaps = 25/435 (5%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAK-DRLTDMVWKVYKKMVQLGVVANIHLYNV 205
           +  L+V  +M      P      VL+N   K  R+ D +  + K++   G   +   YN 
Sbjct: 247 EAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIAD-GFEPDQVTYNT 305

Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
            +H  C++  V    K++  M  +    D+FTYNT+I    K G   EA  + ++M   G
Sbjct: 306 FVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRG 365

Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEAL 323
             PD  T+N+LI   C + R+ EA  L R+  +KG +P+  T+  LI+  C+  D    +
Sbjct: 366 CLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGI 425

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
           RL E M + G  P  VTYN ++  LC  G++ +A  LL EM         VT NT+I+A 
Sbjct: 426 RLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDAL 485

Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY 443
           CK      A +V ++M   G+     T+  LI G CKAK +D A EL+  M+  G  PS 
Sbjct: 486 CKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSN 545

Query: 444 CSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNL 503
            +Y+ ++  YC + + +    +L+   + G  +DV  Y  LI   CK  +   A +L   
Sbjct: 546 ITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRG 605

Query: 504 MQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRR-RLMITLKIYRSFSASYAKDN 562
           M+  GI                   PKA + ++  ++RR  L   L ++R  +    +  
Sbjct: 606 MRIKGI----------------RPTPKAYNPVIQSLFRRNNLRDALSLFREMT----EVG 645

Query: 563 EILDLFWSHVVDRGL 577
           E  D     +V RGL
Sbjct: 646 EPPDALTYKIVFRGL 660



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 132/491 (26%), Positives = 222/491 (45%), Gaps = 21/491 (4%)

Query: 83  TMIHILTKNKHFKSAQNMLEKIA--------------LRDFLSTPSVLNAL-VKIHDDPD 127
           T+I  L +    ++A  MLE+++              ++ F+   S+  AL VK      
Sbjct: 200 TLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMET 259

Query: 128 GNSHV---LSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMV 184
           G S     ++ L+  Y  +   +D L    +       P        ++ L ++      
Sbjct: 260 GCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHA 319

Query: 185 WKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIAL 244
            KV   M+Q G   ++  YN +I+   K+ ++D+ + ++ +M  +    D  T+NTLI  
Sbjct: 320 LKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVA 379

Query: 245 YCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPN 302
            C +    EAL +   +  +G+SPD+ T+N LI+  C+ G      RLF ++K  G  P+
Sbjct: 380 LCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPD 439

Query: 303 HVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLN 362
            VTY  LID  C    L  AL L + M + G     VTYN+I+  LCK+ RI +A  + +
Sbjct: 440 EVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFD 499

Query: 363 EMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAK 422
           +M+   I+   VT NTLI+  CK      A ++  +M++ GL     TY +++  +CK  
Sbjct: 500 QMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQG 559

Query: 423 EMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYR 482
           ++  A ++L  M   GF     +Y  L++G C     +  LKLL     +G+      Y 
Sbjct: 560 DLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYN 619

Query: 483 ALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEP-KACSDILDDMYR 541
            +I+   ++  +  A  LF  M   G   D++ Y  +     R G P K   D L +M  
Sbjct: 620 PVIQSLFRRNNLRDALSLFREMTEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFLVEMVN 679

Query: 542 RRLMITLKIYR 552
           +  M     +R
Sbjct: 680 KGFMPEFSSFR 690



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/376 (26%), Positives = 164/376 (43%), Gaps = 38/376 (10%)

Query: 202 LYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL-AVQDR 260
           +Y  +I     +   D +E L+ EM  +   A      + +  Y +     +A+  V+++
Sbjct: 91  VYEEIIQKLGTAGAFDLMEGLVREMRREGHEAGAGVVRSFVESYARLRRFDDAVDLVRNQ 150

Query: 261 MEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRAND 318
           +   G+  D   YN L++      RM+    ++ ++  +G  P+ VT  TLI   CRA+ 
Sbjct: 151 LNTFGVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQ 210

Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT 378
           +  A+ + E M++  V P   T+ ++++   +EG I  A R+  +M E   +P  VT N 
Sbjct: 211 VRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNV 270

Query: 379 LINAYCKI-----------------------------------GDTASAMKVKNRMLEAG 403
           LIN YCK+                                   G  + A+KV + ML+ G
Sbjct: 271 LINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEG 330

Query: 404 LMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALL 463
              D FTY  +I+   K  E+D AK ++  M+D G  P   +++ L+   C++N  E  L
Sbjct: 331 HDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEAL 390

Query: 464 KLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAY 523
            L  E   +GL  DV  +  LI   CK        RLF  M+ +G   D V Y  L    
Sbjct: 391 DLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHL 450

Query: 524 WRAGEPKACSDILDDM 539
              G+     D+L +M
Sbjct: 451 CSMGKLVNALDLLKEM 466



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/318 (24%), Positives = 134/318 (42%), Gaps = 16/318 (5%)

Query: 261 MEREGISPDIVTYNSLIHGFCR-------EGRMREARRLFRDIKGATPNHVTYTTLIDGY 313
           + RE  +P    Y  +I            EG +RE RR     +G         + ++ Y
Sbjct: 80  LAREDFAPSRAVYEEIIQKLGTAGAFDLMEGLVREMRR-----EGHEAGAGVVRSFVESY 134

Query: 314 CRANDLEEALRL-REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPD 372
            R    ++A+ L R  +   GV      YN +L  L +  R++    + NEM ++ I PD
Sbjct: 135 ARLRRFDDAVDLVRNQLNTFGVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPD 194

Query: 373 NVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLF 432
            VT NTLI A C+     +A+ +   M    +  D+ T+  L+ GF +   ++ A  +  
Sbjct: 195 VVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKT 254

Query: 433 GMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKE 492
            M++ G SP+  + + L++GYC     E  L  + + ++ G   D   Y   +   C+  
Sbjct: 255 KMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNG 314

Query: 493 KVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYR 552
            V +A ++ +LM   G   D   Y ++     + GE      I++ M  R  +     + 
Sbjct: 315 HVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFN 374

Query: 553 SFSASYAKDN---EILDL 567
           +   +    N   E LDL
Sbjct: 375 TLIVALCSQNRLEEALDL 392


>gi|414881814|tpg|DAA58945.1| TPA: hypothetical protein ZEAMMB73_003881 [Zea mays]
          Length = 792

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 124/459 (27%), Positives = 213/459 (46%), Gaps = 38/459 (8%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           L +FD++    + P      VL+     + ++D  +K+ ++M++ G++ + + +N++I  
Sbjct: 311 LDLFDEVVSDGVTPTNVTYGVLIKGCDAEGMSDETYKLCRQMIEQGLLLSTYEFNLVIKG 370

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
             +         LL E+       D+FTY  LI   CK    +EA+ + D+M+  G+ P 
Sbjct: 371 LLRDKRWKDAIGLL-ELVVDTGVPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPS 429

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLRE 327
           IVTY+SL+ G+C +GRM EA +L+ ++  KG  PN VTYTTL+ GY +    + A  L  
Sbjct: 430 IVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLN 489

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
            M   GV  G  TYN ++  L    R+ + + +L     +   P  +T N++IN + K G
Sbjct: 490 EMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAG 549

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
              SA  +  +M + G+  +  TY + I G+C+    D+A +LL  +   G  P   +Y+
Sbjct: 550 MMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYN 609

Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRA------------------------ 483
             +D +C + N    L  L   +  GL  DV+VY +                        
Sbjct: 610 AFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQ 669

Query: 484 -----------LIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKAC 532
                      LI  F K   V +A  L++ M  N ++ D   +T+L +   R+G+    
Sbjct: 670 RVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGA 729

Query: 533 SDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSH 571
             +LDDM R  +   +  Y     +  +D ++ + F  H
Sbjct: 730 KRLLDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLH 768



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 106/421 (25%), Positives = 198/421 (47%), Gaps = 23/421 (5%)

Query: 68  ESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPD 127
           ++ VP+    + ++  +IH L K++    A N+ +K      +    V  ++V  H    
Sbjct: 389 DTGVPD----VFTYGCLIHWLCKHQKLHEAVNLWDK------MKEAGVKPSIVTYHS--- 435

Query: 128 GNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKV 187
                   L++ Y       + L+++ +M      P+    T L+    K +  D  + +
Sbjct: 436 --------LLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYAL 487

Query: 188 YKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCK 247
             +M Q GV    + YN+LI+     + V +V+++L     +       TYN++I  + K
Sbjct: 488 LNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVK 547

Query: 248 KGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVT 305
            GM   A  +  +M ++GI+P+IVTY S I G+CR      A +L   ++  G  P+   
Sbjct: 548 AGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAA 607

Query: 306 YTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMN 365
           Y   ID +C+  ++  AL    ++   G+ P V  YNS +        + +A++    M 
Sbjct: 608 YNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMI 667

Query: 366 EKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMD 425
           ++++  D     TLI+ + K+G+ A A+++ + M+   ++ D  T+ AL HG C++ ++D
Sbjct: 668 KQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTALTHGLCRSGDID 727

Query: 426 IAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
            AK LL  M     SP+  +Y+ L++        +   +L DE +S G+  D + Y  L 
Sbjct: 728 GAKRLLDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLHDEMLSSGVVPDDTTYDILP 787

Query: 486 R 486
           R
Sbjct: 788 R 788



 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 119/440 (27%), Positives = 192/440 (43%), Gaps = 18/440 (4%)

Query: 153 FDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCK 212
           + +M    ++P   + T LL + A+         ++ +M   G  A+  +Y+V+I AC +
Sbjct: 138 YSRMVTRGVVPDAKSRTDLLVTTARGASAADALTLFDEMRGKGCYADAKMYDVVIRACVR 197

Query: 213 SSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVT 272
                   +L  EM    V+ D   Y   I+  CK      AL V  +M   G  P  +T
Sbjct: 198 GGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELT 257

Query: 273 YNSLIHGFCREGRMREARRLFRDIKGATPNH---VTYTTLIDGYCRANDLEEALRLREVM 329
           Y+S++    + GRM EA RL   +  AT      V  T L+ GYC   ++ +AL L + +
Sbjct: 258 YSSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLHGEVGKALDLFDEV 317

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
            + GV P  VTY  +++    EG   +  +L  +M E+ +       N +I    +    
Sbjct: 318 VSDGVTPTNVTYGVLIKGCDAEGMSDETYKLCRQMIEQGLLLSTYEFNLVIKGLLRDKRW 377

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
             A+ +   +++ G+  D FTY  LIH  CK +++  A  L   M +AG  PS  +Y  L
Sbjct: 378 KDAIGLLELVVDTGVP-DVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSL 436

Query: 450 VDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGI 509
           + GYC K   +  LKL  E   +G   +   Y  L++ + KK+  D A  L N M+ NG+
Sbjct: 437 LLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGV 496

Query: 510 LGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFW 569
                 Y  L    +     + C   +D+M +R L         F  +    N I++ F 
Sbjct: 497 SCGDYTYNILINGLYMVN--RVCE--VDEMLKRFL------SEGFVPTTMTYNSIINGF- 545

Query: 570 SHVVDRGLMSKHIFKEMQLR 589
              V  G+M        Q+R
Sbjct: 546 ---VKAGMMGSAFGMYRQMR 562


>gi|357518651|ref|XP_003629614.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523636|gb|AET04090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 592

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 136/499 (27%), Positives = 227/499 (45%), Gaps = 23/499 (4%)

Query: 73  NYKHSLQSHWTMIHILT------KNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDP 126
           N  H +QSH      L       K+   KS    L      +F  T + +N L  + D  
Sbjct: 26  NINHEIQSHSNKTQFLNFMRNQCKSGKLKSIDEAL------NFFHTMAKMNPLPSVID-- 77

Query: 127 DGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVH-NLMPHLHACTVLLNSLAKDRLTDMVW 185
                  + L+ F   +K     + +  +M     + P      V++NSL   +L    +
Sbjct: 78  ------FTLLLGFIVKMKHYTTAISLVKEMHSSLGIKPDTFILNVVINSLCHLKLVAFGF 131

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
            V   M++LG+  ++  + +LI+  C   DV +  +L+  +E    R+D+ TY  LI   
Sbjct: 132 SVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVELVDHVEKTGYRSDVKTYGVLINGL 191

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNH 303
           CK G   EA+    +ME    +P++V Y++++ G C++G + EA  L  ++  KG  PN 
Sbjct: 192 CKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNL 251

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
           VTYT LI G C     +EA  L + M   GV P + + N ++  LCKEG+I  A  ++  
Sbjct: 252 VTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGF 311

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
           M      PD  T N+LI+ YC       A +V   M+  G + D   Y +LIHG+CK K 
Sbjct: 312 MILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKN 371

Query: 424 MDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRA 483
           ++ A  LL  M+  GF+P   +++ L+ G+C      A  +L       G   ++     
Sbjct: 372 INKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAI 431

Query: 484 LIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRR 543
           ++   CK + +  A  LF+ M+ + +  + VIY+ +      AG+     ++   +  + 
Sbjct: 432 ILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKG 491

Query: 544 LMITLKIYRSFSASYAKDN 562
           L I +  Y      +AK  
Sbjct: 492 LQINVYAYTIMINGFAKQG 510



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 126/430 (29%), Positives = 201/430 (46%), Gaps = 24/430 (5%)

Query: 141 ANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKM-VQLGVVAN 199
             LK   + L  F  M   N +P +   T+LL  + K +       + K+M   LG+  +
Sbjct: 51  GKLKSIDEALNFFHTMAKMNPLPSVIDFTLLLGFIVKMKHYTTAISLVKEMHSSLGIKPD 110

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
             + NV+I++ C    V     +L  M    +   + T+  LI   C KG    A+ + D
Sbjct: 111 TFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVELVD 170

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRAN 317
            +E+ G   D+ TY  LI+G C+ G+  EA    R +  +   PN V Y+T++DG C+  
Sbjct: 171 HVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDG 230

Query: 318 DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCN 377
            + EAL L   M+ KG+ P +VTY  +++ LC  GR ++A  LL+EM +  + PD  + N
Sbjct: 231 LVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLN 290

Query: 378 TLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA 437
            L++  CK G    A  V   M+  G + D FTY +LI  +C   +MD A  +   M+  
Sbjct: 291 ILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSR 350

Query: 438 GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYA 497
           G  P   +Y+ L+ G+C   N    + LLDE +  G   DV  +  LI  FC+  +   A
Sbjct: 351 GCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAA 410

Query: 498 QRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSAS 557
           + LF  M                + Y +    + C+ ILD + + +L+       + S  
Sbjct: 411 KELFLNM----------------HKYGQVPNLQTCAIILDGLCKSQLL-----SEALSLF 449

Query: 558 YAKDNEILDL 567
           +A +   LDL
Sbjct: 450 HAMEKSNLDL 459



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 108/349 (30%), Positives = 178/349 (51%), Gaps = 2/349 (0%)

Query: 170 VLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFK 229
           VL+N L K   T       +KM +     N+ +Y+ ++   CK   V +   L  EM  K
Sbjct: 186 VLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEMSGK 245

Query: 230 DVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA 289
            ++ +L TY  LI   C  G   EA ++ D M + G+ PD+ + N L+   C+EG++ +A
Sbjct: 246 GIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQA 305

Query: 290 RRL--FRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRK 347
           + +  F  + G  P+  TY +LID YC  N ++EA R+ E+M ++G  P +V Y S++  
Sbjct: 306 KSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHG 365

Query: 348 LCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLD 407
            CK   I  A  LL+EM +    PD VT  TLI  +C++G   +A ++   M + G + +
Sbjct: 366 WCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPN 425

Query: 408 QFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLD 467
             T   ++ G CK++ +  A  L   M  +    +   YS ++DG C+       L+L  
Sbjct: 426 LQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFS 485

Query: 468 EFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIY 516
              ++GL ++V  Y  +I  F K+  +D A+ L + M+ NG + DS  Y
Sbjct: 486 CLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTY 534



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 100/388 (25%), Positives = 182/388 (46%), Gaps = 4/388 (1%)

Query: 130 SHVLSWLVIFYANLKM--TQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKV 187
           S V ++ V+     KM  T + +    +M   N  P++   + +++ L KD L      +
Sbjct: 179 SDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGL 238

Query: 188 YKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCK 247
             +M   G+  N+  Y  LI   C      +   LL EM    V  DL + N L+ + CK
Sbjct: 239 CLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCK 298

Query: 248 KGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVT 305
           +G   +A +V   M   G  PD+ TYNSLI  +C + +M EA R+F  +  +G  P+ V 
Sbjct: 299 EGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVA 358

Query: 306 YTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMN 365
           YT+LI G+C+  ++ +A+ L + M   G  P VVT+ +++   C+ GR   A  L   M+
Sbjct: 359 YTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMH 418

Query: 366 EKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMD 425
           +    P+  TC  +++  CK    + A+ + + M ++ L L+   Y  ++ G C A +++
Sbjct: 419 KYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLN 478

Query: 426 IAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
            A EL   +   G   +  +Y+ +++G+  +   +    LL      G   D   Y   +
Sbjct: 479 TALELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFV 538

Query: 486 RRFCKKEKVDYAQRLFNLMQGNGILGDS 513
           +    + ++  + +   +M+  G   D+
Sbjct: 539 QGLVAEREIARSIKYLTMMRDKGFSVDA 566



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 109/406 (26%), Positives = 185/406 (45%), Gaps = 25/406 (6%)

Query: 101 LEKIALRDFLSTPSVL-NALVKIHDDPDGNSHVLSWL-----------VIFYANL----- 143
           +EK   R  + T  VL N L K+       S  + WL           V+ Y+ +     
Sbjct: 172 VEKTGYRSDVKTYGVLINGLCKMGK----TSEAVGWLRKMEERNWNPNVVVYSTVMDGLC 227

Query: 144 --KMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIH 201
              +  + L +  +M    + P+L   T L+  L           +  +M+++GV+ ++ 
Sbjct: 228 KDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQ 287

Query: 202 LYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRM 261
             N+L+   CK   + + + ++  M       D+FTYN+LI  YC +    EA  V + M
Sbjct: 288 SLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELM 347

Query: 262 EREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDL 319
              G  PDIV Y SLIHG+C+   + +A  L  ++   G TP+ VT+TTLI G+C+    
Sbjct: 348 VSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRP 407

Query: 320 EEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTL 379
             A  L   M   G  P + T   IL  LCK   + +A  L + M +  +  + V  + +
Sbjct: 408 LAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSII 467

Query: 380 INAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGF 439
           ++  C  G   +A+++ + +   GL ++ + Y  +I+GF K   +D A++LL  M + G 
Sbjct: 468 LDGMCSAGKLNTALELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGC 527

Query: 440 SPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
            P  C+Y+  V G   +      +K L     +G  VD +    +I
Sbjct: 528 MPDSCTYNVFVQGLVAEREIARSIKYLTMMRDKGFSVDATTTEMII 573


>gi|359494794|ref|XP_002267896.2| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
           mitochondrial [Vitis vinifera]
          Length = 876

 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 120/396 (30%), Positives = 196/396 (49%), Gaps = 3/396 (0%)

Query: 169 TVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEF 228
           + LL  LAK  +  + + VY++MV  G V     Y  +++A CK+  V   E   C++  
Sbjct: 140 STLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLR 199

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMERE-GISPDIVTYNSLIHGFCREGRMR 287
                D     +L+   C++    EA  V ++M +E    P+ VTY+ LIHG C  GR+ 
Sbjct: 200 LGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLE 259

Query: 288 EARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSIL 345
           EA +L +++  KG  P+  TYT LI   C     ++A+++ + MA K   P V TY  ++
Sbjct: 260 EAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILI 319

Query: 346 RKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLM 405
            +LC+EG+I +AN +  +M +  + P  +T N LIN YCK G   SA ++ + M +    
Sbjct: 320 DRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCK 379

Query: 406 LDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKL 465
            +  TY  L+ G C+  +   A  LL  ++D G  P   +Y+ LVDG+C +        +
Sbjct: 380 PNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNI 439

Query: 466 LDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWR 525
            +   S GL  D   + ALI   CK  +++ A  +   M   GI  D V +T+L   + +
Sbjct: 440 FNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCK 499

Query: 526 AGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKD 561
            G+ K    + ++M   R + T   +  F  +  KD
Sbjct: 500 IGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKD 535



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 135/511 (26%), Positives = 227/511 (44%), Gaps = 51/511 (9%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQM-RVHNLMPHLHACTVLLNSLAKDRLTDMVWKV 187
           ++HV + LV+         +  +VF++M +  N  P+    ++L++ L +    +  +++
Sbjct: 205 DTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQL 264

Query: 188 YKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCK 247
            ++MV+ G   +   Y VLI A C     DK  K+L EM  K    ++ TY  LI   C+
Sbjct: 265 KQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCR 324

Query: 248 KGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGAT--PNHVT 305
           +G   EA  V  +M + G+ P I+T+N+LI+G+C+EG +  A +L   ++     PN  T
Sbjct: 325 EGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRT 384

Query: 306 YTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMN 365
           Y  L++G CR +   +A  L   +   G+ P  VTYN ++   CKEG++  A  + N MN
Sbjct: 385 YNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMN 444

Query: 366 EKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCK-AKEM 424
              + PD  T   LI+  CK+G    A  +   M++ G+ LD+ T+ ALI G CK  K  
Sbjct: 445 SAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAK 504

Query: 425 DI----------------------------------AKELLFGMLDAGFSPSYCSYSWLV 450
           D+                                  A  +L  M+  G  PS  +++ L+
Sbjct: 505 DVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILI 564

Query: 451 DGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGIL 510
           +G+C        LK+L+     G   +V  Y  +I   C   +V+ A+ +   M   G+ 
Sbjct: 565 EGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVS 624

Query: 511 GDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEIL----- 565
            +   Y  L  A+ +AG       I+  M +        IY +  + +   N  +     
Sbjct: 625 PNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARAL 684

Query: 566 ----DL----FWSHVVDRGLMSKHIFKEMQL 588
               DL      S   D   +S H+F+ M +
Sbjct: 685 SSTGDLDARSLSSEENDNNCLSSHVFRLMDV 715



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 121/454 (26%), Positives = 194/454 (42%), Gaps = 49/454 (10%)

Query: 179 RLTDMVWKVYKKMVQLGVVANIHLYNV-------LIHACCKSSD-VDKVEKLLCEMEFKD 230
           R +   + +  ++  LGV+ +  L+ V       LI  C  S + V K+   L  M    
Sbjct: 72  RQSSYCYDLDGRIQLLGVLVSRDLFGVAQKAVVLLIQECEDSENGVVKLMGALDGMTELG 131

Query: 231 VRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMR--- 287
            R     Y+TL+    K  M + A  V  RM  EG     + Y ++++  C+ G ++   
Sbjct: 132 FRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAE 191

Query: 288 --------------------------------EARRLFRDI---KGATPNHVTYTTLIDG 312
                                           EA R+F  +   +   PN VTY+ LI G
Sbjct: 192 MFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHG 251

Query: 313 YCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPD 372
            C A  LEEA +L++ M  KG  P   TY  +++  C  G    A ++L+EM  K   P+
Sbjct: 252 LCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPN 311

Query: 373 NVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLF 432
             T   LI+  C+ G    A  V  +ML+ GL     T+ ALI+G+CK   +  A +LL 
Sbjct: 312 VHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLS 371

Query: 433 GMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKE 492
            M      P+  +Y+ L++G C  +       LL   V  GL  D   Y  L+  FCK+ 
Sbjct: 372 VMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEG 431

Query: 493 KVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYR 552
           +++ A  +FN M   G+  D   +T+L     + G  +  + IL  M ++ + +    + 
Sbjct: 432 QLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFT 491

Query: 553 SFSASYAKDNEILD---LFWSHVVDRGLMSKHIF 583
           +    + K  +  D   LF + V +R L + H F
Sbjct: 492 ALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTF 525



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 94/377 (24%), Positives = 166/377 (44%), Gaps = 44/377 (11%)

Query: 169 TVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEF 228
           T L++   K      V  +++ MV+   +   H +N  + A  K   +++   +L +M  
Sbjct: 491 TALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMK 550

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
             +   + T+  LI  +C+ G    +L + +RM++ G SP++ TY  +I+G C  GR+ E
Sbjct: 551 YGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEE 610

Query: 289 ARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSIL- 345
           A  +   +   G +PNH TY  L+  + +A  L+ A ++   M   G  P    Y+++L 
Sbjct: 611 AETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLS 670

Query: 346 -----------RKLCKEGRIRDANRLLNEMNEK-----------------KIAPDNVTC- 376
                      R L   G + DA  L +E N+                  KI  +   C 
Sbjct: 671 GFVLSNTAIGARALSSTGDL-DARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIKKCG 729

Query: 377 -------NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKE 429
                  N L+   CK G    A ++   M++ GL  D+    ++I  +CK  + D   E
Sbjct: 730 VPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDK-AISSIIEHYCKTCKYDNCLE 788

Query: 430 LLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSR-GLCVDVSVYRALIRRF 488
            +  +LD  F PS+ SY W++ G  N+   +   KL+ + V   G+  +V V  ++   F
Sbjct: 789 FMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLVRHTGIEEEVEVTPSI--EF 846

Query: 489 CKKEKVDYAQRLFNLMQ 505
             KE+ D   +   L++
Sbjct: 847 LMKEEEDDPDKCLKLIK 863


>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
          Length = 798

 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 108/362 (29%), Positives = 179/362 (49%), Gaps = 2/362 (0%)

Query: 169 TVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEF 228
           TV+   L + R  D  + ++ +M+  G+  ++  YN +I A  K+  +DK   +L  M  
Sbjct: 207 TVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVK 266

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
                +  T+N+L+  YC  G   +A+ V  RM R+G+ PD+ TYN+L+   C+ GR  E
Sbjct: 267 NGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSME 326

Query: 289 ARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILR 346
           AR++F  +  +G  PN  TY TL+ GY     L +   L ++M   G+ P    +N ++ 
Sbjct: 327 ARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIG 386

Query: 347 KLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLML 406
              K G++ DA  L ++M  + + PD VT   +++A C +G    AM    R++  GL  
Sbjct: 387 TYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTP 446

Query: 407 DQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLL 466
           D   ++ LIHG C   + D A+EL   M+  G  P+   ++ L++  C +        + 
Sbjct: 447 DAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIF 506

Query: 467 DEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRA 526
           D  V   +  DV  Y  LI  +C   KVD A +L   M  +G+  + V Y ++   Y + 
Sbjct: 507 DLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKN 566

Query: 527 GE 528
           G 
Sbjct: 567 GR 568



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 113/403 (28%), Positives = 184/403 (45%), Gaps = 37/403 (9%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
            +FDQM    L P +     ++++L+K R  D    V  +MV+ G + N   +N L+H  
Sbjct: 224 HLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITHNSLLHGY 283

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           C S   +    +   M    V  D+FTYNTL+   CK G   EA  + D M + G  P+ 
Sbjct: 284 CSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNS 343

Query: 271 VTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
            TY +L+HG+  EG + +   L   +   G  P+H  +  LI  Y +   +++A+ L   
Sbjct: 344 ATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSK 403

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDA----NRLLN---------------------- 362
           M  +G+ P  VTY  ++  LC  G++ DA     RL++                      
Sbjct: 404 MRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDK 463

Query: 363 ---------EMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKA 413
                    EM  + I P+N+  NTL+N  CK G  A A  + + M+   +  D  TY  
Sbjct: 464 WDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNT 523

Query: 414 LIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
           LI G+C   ++D A +LL GM+  G  P+  +Y+ +++GYC     E    L  +  S+G
Sbjct: 524 LIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKG 583

Query: 474 LCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIY 516
           +   +  Y  +++   +  +   A+ L+  M  +GI  D   Y
Sbjct: 584 VNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTY 626



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 113/409 (27%), Positives = 192/409 (46%), Gaps = 11/409 (2%)

Query: 177 KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKD-----V 231
           K R ++ +    ++M  LG   N+  Y +L+   C  +   +   LL  M   D      
Sbjct: 139 KKRTSEAMDIALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGY 198

Query: 232 RADLFTYNTLIALYCKKGMHYE-ALAVQDRMEREGISPDIVTYNSLIHGFCREGRM-REA 289
             D+ +YNT+I    ++G   + A  + D+M  +G+SPD+VTYNS+I    +   M + A
Sbjct: 199 PPDVVSYNTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAA 258

Query: 290 RRLFRDIK-GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
             L R +K GA PN +T+ +L+ GYC +    +A+ + + M   GV P V TYN+++  L
Sbjct: 259 VVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYL 318

Query: 349 CKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ 408
           CK GR  +A ++ + M ++   P++ T  TL++ Y   G       + + M+  G+  D 
Sbjct: 319 CKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDH 378

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
           + +  LI  + K  ++D A  L   M   G +P   +Y  ++D  C     +  +     
Sbjct: 379 YIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGR 438

Query: 469 FVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
            +S GL  D  V+R LI   C ++K D A+ L   M G GI  +++ + +L     + G 
Sbjct: 439 LISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGM 498

Query: 529 PKACSDILDDMYRRRLMITLKIYRSFSASY---AKDNEILDLFWSHVVD 574
                +I D M R  +   +  Y +    Y    K +E   L    V+D
Sbjct: 499 VARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLD 547



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/389 (27%), Positives = 183/389 (47%), Gaps = 4/389 (1%)

Query: 115 VLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNS 174
           VL  +VK    P+  +H  + L+  Y +     D + VF +M    + P +     L+  
Sbjct: 260 VLVRMVKNGAMPNRITH--NSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGY 317

Query: 175 LAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRAD 234
           L K+  +    K++  MV+ G   N   Y  L+H       + K+  LL  M    ++ D
Sbjct: 318 LCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPD 377

Query: 235 LFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR 294
            + +N LI  Y K G   +A+ +  +M R+G++PD VTY  ++   C  G++ +A   F 
Sbjct: 378 HYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFG 437

Query: 295 DI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEG 352
            +  +G TP+ V +  LI G C  +  ++A  L   M  +G+ P  + +N++L  LCKEG
Sbjct: 438 RLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEG 497

Query: 353 RIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYK 412
            +  A  + + M    +  D +T NTLI+ YC  G    A K+   M+  G+  ++ TY 
Sbjct: 498 MVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYN 557

Query: 413 ALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSR 472
            +I+G+CK   ++ A  L   M   G +P   +YS ++ G        A  +L    +  
Sbjct: 558 TMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKS 617

Query: 473 GLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
           G+  D+  Y  ++   C+    D A R+F
Sbjct: 618 GIKFDIGTYNIILLGLCQNNCTDDALRIF 646



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 107/385 (27%), Positives = 183/385 (47%), Gaps = 4/385 (1%)

Query: 115 VLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNS 174
           +L+ +V+    PD   ++ + L+  Y       D + +F +MR   L P      +++++
Sbjct: 365 LLDMMVRNGIQPD--HYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDA 422

Query: 175 LAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRAD 234
           L      D     + +++  G+  +  ++  LIH  C     DK E+L  EM  + +  +
Sbjct: 423 LCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPN 482

Query: 235 LFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR 294
              +NTL+   CK+GM   A  + D M R  +  D++TYN+LI G+C  G++ EA +L  
Sbjct: 483 NIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLE 542

Query: 295 D--IKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEG 352
              + G  PN VTY T+I+GYC+   +E+A  L   MA+KGV PG+VTY++IL+ L +  
Sbjct: 543 GMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQAR 602

Query: 353 RIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYK 412
           R   A  L   M +  I  D  T N ++   C+   T  A+++   +      L+  T+ 
Sbjct: 603 RTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRTFN 662

Query: 413 ALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSR 472
            +I    K    D AK+L   +L  G  P+  +Y  ++     +   E L  L       
Sbjct: 663 IMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKN 722

Query: 473 GLCVDVSVYRALIRRFCKKEKVDYA 497
           G   +  +  AL+ +  +K +V  A
Sbjct: 723 GCTANSRMLNALVGKLLQKGEVRKA 747



 Score =  141 bits (356), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 104/415 (25%), Positives = 183/415 (44%), Gaps = 37/415 (8%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           ++FD M      P+      LL+  A +     +  +   MV+ G+  + +++N+LI   
Sbjct: 329 KIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTY 388

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
            K   VD    L  +M  + +  D  TY  ++   C  G   +A+A   R+  EG++PD 
Sbjct: 389 TKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDA 448

Query: 271 VTYNSLIHGFCREGRMREARRLFRDI--KGATPNHV------------------------ 304
           V + +LIHG C   +  +A  L  ++  +G  PN++                        
Sbjct: 449 VVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDL 508

Query: 305 -----------TYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGR 353
                      TY TLIDGYC    ++EA +L E M   GV P  VTYN+++   CK GR
Sbjct: 509 MVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGR 568

Query: 354 IRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKA 413
           I DA  L  +M  K + P  VT +T++    +   TA+A ++   M+++G+  D  TY  
Sbjct: 569 IEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNI 628

Query: 414 LIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
           ++ G C+    D A  +   +    F     +++ ++D        +    L    ++RG
Sbjct: 629 ILLGLCQNNCTDDALRIFQNLYLIDFHLENRTFNIMIDALLKGGRHDEAKDLFASLLARG 688

Query: 474 LCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
           L  +V  Y  +++   ++  ++    LF  ++ NG   +S +  +L     + GE
Sbjct: 689 LVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTANSRMLNALVGKLLQKGE 743



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 94/325 (28%), Positives = 156/325 (48%), Gaps = 13/325 (4%)

Query: 231 VRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA- 289
           V  +L TY+ +I    + G    A A   R+ R G + + +T++ L+   C + R  EA 
Sbjct: 87  VPPNLITYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKKRTSEAM 146

Query: 290 ----RRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMA----AKGVY-PGVVT 340
               RR+   + G TPN  +YT L+ G C  N  ++AL L   M      +G Y P VV+
Sbjct: 147 DIALRRM--PVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVS 204

Query: 341 YNSILRKLCKEGRIRD-ANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRM 399
           YN+++  L +EGR  D A  L ++M ++ ++PD VT N++I+A  K      A  V  RM
Sbjct: 205 YNTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRM 264

Query: 400 LEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNE 459
           ++ G M ++ T+ +L+HG+C + + + A  +   M   G  P   +Y+ L+   C     
Sbjct: 265 VKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRS 324

Query: 460 EALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
               K+ D  V RG   + + Y  L+  +  +  +     L ++M  NGI  D  I+  L
Sbjct: 325 MEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNIL 384

Query: 520 AYAYWRAGEPKACSDILDDMYRRRL 544
              Y + G+      +   M R+ L
Sbjct: 385 IGTYTKHGKVDDAMLLFSKMRRQGL 409



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 83/321 (25%), Positives = 132/321 (41%), Gaps = 44/321 (13%)

Query: 301 PNHVTYTTLIDGYCRANDLEEAL-----------------------------RLREV--- 328
           PN +TY+ +ID   R   L+ A                              R  E    
Sbjct: 89  PNLITYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKKRTSEAMDI 148

Query: 329 ----MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM-----NEKKIAPDNVTCNTL 379
               M   G  P V +Y  +L+ LC E R + A  LL+ M           PD V+ NT+
Sbjct: 149 ALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTV 208

Query: 380 INAYCKIG-DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAG 438
           IN   + G    +A  + ++ML+ GL  D  TY ++I    KA+ MD A  +L  M+  G
Sbjct: 209 INGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNG 268

Query: 439 FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQ 498
             P+  +++ L+ GYC+       + +       G+  DV  Y  L+   CK  +   A+
Sbjct: 269 AMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEAR 328

Query: 499 RLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASY 558
           ++F+ M   G   +S  Y +L + Y   G       +LD M R  +     I+     +Y
Sbjct: 329 KIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTY 388

Query: 559 AKDNEILD--LFWSHVVDRGL 577
            K  ++ D  L +S +  +GL
Sbjct: 389 TKHGKVDDAMLLFSKMRRQGL 409



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 70/283 (24%), Positives = 130/283 (45%), Gaps = 37/283 (13%)

Query: 170 VLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFK 229
            LLN L K+ +      ++  MV++ V  ++  YN LI   C    VD+  KLL  M   
Sbjct: 488 TLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLD 547

Query: 230 DVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA 289
            V+ +  TYNT+I  YCK G   +A ++  +M  +G++P IVTY++++ G  +  R   A
Sbjct: 548 GVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAA 607

Query: 290 RRLFR-DIKGATPNHV-TYTTLIDGYCRANDLEEALRL---------------------- 325
           + L+   IK      + TY  ++ G C+ N  ++ALR+                      
Sbjct: 608 KELYLWMIKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRTFNIMIDA 667

Query: 326 ----------REVMA---AKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPD 372
                     +++ A   A+G+ P VVTY  +++ L ++G + + + L   + +     +
Sbjct: 668 LLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTAN 727

Query: 373 NVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALI 415
           +   N L+    + G+   A    +++ E    L+  T ++L+
Sbjct: 728 SRMLNALVGKLLQKGEVRKAGVYLSKIDENNFSLEASTAESLV 770


>gi|449446855|ref|XP_004141186.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like [Cucumis sativus]
          Length = 1079

 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 125/487 (25%), Positives = 217/487 (44%), Gaps = 6/487 (1%)

Query: 59  LSCAFFKWAESAVPNYKHSLQSHWTMI--HILTKNKHFKSAQNMLEKIALRDFLSTPSVL 116
           L+  F KW     P  + +  +H   I  H+L K + +  A+++L+ +A ++  S   + 
Sbjct: 34  LALKFLKWVIKQ-PGLEPNHLTHILGITTHVLVKARLYGYAKSILKHLAQKNSGSN-FLF 91

Query: 117 NALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLA 176
             L+  +     N  V   L+  Y    M    +  F  M +    P ++ C +++ S+ 
Sbjct: 92  GVLMDTYPLCSSNPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMV 151

Query: 177 KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLF 236
           K+    +VW  +K+M+   V  N+  +N+LI   C    + K   +L  ME       + 
Sbjct: 152 KNCRAHLVWSFFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIV 211

Query: 237 TYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI 296
           +YNTL++  CKKG    AL +   ME +GI  D+ TYN  I   CR  R  +   + + +
Sbjct: 212 SYNTLLSWCCKKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKM 271

Query: 297 KGA--TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRI 354
           +    TPN V+Y TLI+G+ +   +  A R+   M    + P ++TYN ++   C  G  
Sbjct: 272 RNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNF 331

Query: 355 RDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKAL 414
            +A R+L+ M    + P+ VT  TL+N   K      A  +  R       L+  ++  +
Sbjct: 332 EEALRVLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYCINRTSLNCISHTVM 391

Query: 415 IHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGL 474
           I G C+   +D A +LL  M   G  P   ++S L++G+C   N     +++ +    G 
Sbjct: 392 IDGLCRNGLLDEAFQLLIEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMSKIYREGF 451

Query: 475 CVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSD 534
             +  ++  LI   CK   V  A + +  M  NG   D+    SL  +    G+     +
Sbjct: 452 VPNNVIFSTLIYNSCKVGNVYEAMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEE 511

Query: 535 ILDDMYR 541
            L  + R
Sbjct: 512 FLHHISR 518



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 102/383 (26%), Positives = 184/383 (48%), Gaps = 4/383 (1%)

Query: 167 ACT--VLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLC 224
            CT  + ++SL ++  +   + V KKM    +  N   YN LI+   K   +    ++  
Sbjct: 245 VCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFN 304

Query: 225 EMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREG 284
           EM   ++  +L TYN LI  YC  G   EAL V D ME   + P+ VT  +L++G  +  
Sbjct: 305 EMIELNLSPNLITYNILINGYCINGNFEEALRVLDVMEANDVRPNEVTIGTLLNGLYKSA 364

Query: 285 RMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYN 342
           +   AR +     I   + N +++T +IDG CR   L+EA +L   M   GV+P ++T++
Sbjct: 365 KFDVARNILERYCINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVHPDIITFS 424

Query: 343 SILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEA 402
            ++   CK G I  A  +++++  +   P+NV  +TLI   CK+G+   AMK    M   
Sbjct: 425 VLINGFCKVGNINKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEAMKFYAAMNLN 484

Query: 403 GLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEAL 462
           G   D FT  +L+   C+  ++  A+E L  +   G  P+  ++  +++GY N  +    
Sbjct: 485 GQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGA 544

Query: 463 LKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYA 522
             + D  +S G       Y +L++  CK +    A++L   +    +  D++ Y +L   
Sbjct: 545 FSVFDRMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVE 604

Query: 523 YWRAGEPKACSDILDDMYRRRLM 545
             ++G       + ++M +  ++
Sbjct: 605 ISKSGNLLEAVRLFEEMIQNNIL 627



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 92/383 (24%), Positives = 177/383 (46%), Gaps = 3/383 (0%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           +  Q+  +M    + P +   +VL+N   K    +   +V  K+ + G V N  +++ LI
Sbjct: 403 EAFQLLIEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMSKIYREGFVPNNVIFSTLI 462

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           +  CK  +V +  K    M      AD FT N+L+A  C+ G   EA      + R G+ 
Sbjct: 463 YNSCKVGNVYEAMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLV 522

Query: 268 PDIVTYNSLIHGFCREGRMREARRLF-RDIK-GATPNHVTYTTLIDGYCRANDLEEALRL 325
           P+ VT++ +I+G+   G    A  +F R I  G  P+  TY +L+   C+  +  EA +L
Sbjct: 523 PNSVTFDCIINGYANVGDGSGAFSVFDRMISCGHHPSPFTYGSLLKVLCKGQNFWEARKL 582

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
            + +    +    ++YN+++ ++ K G + +A RL  EM +  I PD+ T   +++   +
Sbjct: 583 LKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIR 642

Query: 386 IGDTASAMKVKNRMLEAGLM-LDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
            G    A     R+++  ++ L+   Y   I G  KA +   A  L   M + G S    
Sbjct: 643 EGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLI 702

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
           + + + DGY       +   L+ +  ++ +  +++ +  L+  + + + +    +L+NLM
Sbjct: 703 ALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLM 762

Query: 505 QGNGILGDSVIYTSLAYAYWRAG 527
           + +G   + + Y SL       G
Sbjct: 763 RRSGFFPNRLTYHSLILGLCNHG 785



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 119/529 (22%), Positives = 206/529 (38%), Gaps = 75/529 (14%)

Query: 129  NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
            NS     ++  YAN+        VFD+M      P       LL  L K +      K+ 
Sbjct: 524  NSVTFDCIINGYANVGDGSGAFSVFDRMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLL 583

Query: 189  KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIA----- 243
            KK+  + +  +   YN LI    KS ++ +  +L  EM   ++  D +TY  +++     
Sbjct: 584  KKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIRE 643

Query: 244  --LYC-----------------------------KKGMHYEALAVQDRMEREGISPDIVT 272
              L C                             K G    AL +   ME +G+S D++ 
Sbjct: 644  GRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIA 703

Query: 273  YNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMA 330
             NS+  G+ R G++  A  L      K   PN  T+  L+ GY R  D+    +L  +M 
Sbjct: 704  LNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMR 763

Query: 331  AKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTA 390
              G +P  +TY+S++  LC  G +    ++L     +    D++T N LI   C+I D  
Sbjct: 764  RSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLD 823

Query: 391  SAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLV 450
              + + + M    + LD+ T KA+     +          +  ML  GF P+   Y  ++
Sbjct: 824  KVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMM 883

Query: 451  DGYCNKNNEEALLKLLDEFVSRGLCVD--------------------------------- 477
               C   + +   KL D+ V+ G+ +D                                 
Sbjct: 884  KRMCRVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKI 943

Query: 478  --VSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDI 535
               S +  L+  FCKK+    A  L  LM+   +  D V Y  L  A    G+     D 
Sbjct: 944  PTTSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCANGDVITALDF 1003

Query: 536  LDDMYRRRLMITLKIYRSFSASYAKDNEIL--DLFWSHVVDRGLMSKHI 582
             +++ ++ L+  +  YR   ++ +  + +   ++    + DRGL+S ++
Sbjct: 1004 YEEIKQKGLLPNMTTYRVLVSAISTKHYVSRGEIVLKDLNDRGLVSGYL 1052



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/223 (20%), Positives = 87/223 (39%), Gaps = 2/223 (0%)

Query: 336 PGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKV 395
           P V  ++ ++R   ++G +  A    + M  +   P   TCN ++ +  K          
Sbjct: 105 PAV--FDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWSF 162

Query: 396 KNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCN 455
             +ML + +  +  ++  LI   C   ++  A  +L  M   G+ P+  SY+ L+   C 
Sbjct: 163 FKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCK 222

Query: 456 KNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVI 515
           K   +  L L+     +G+  DV  Y   I   C+  +      +   M+   I  + V 
Sbjct: 223 KGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVS 282

Query: 516 YTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASY 558
           Y +L   + + G+    + + ++M    L   L  Y      Y
Sbjct: 283 YNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGY 325


>gi|356561716|ref|XP_003549125.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62930,
           chloroplastic-like [Glycine max]
          Length = 556

 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 109/377 (28%), Positives = 191/377 (50%), Gaps = 2/377 (0%)

Query: 171 LLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKD 230
           L+N L K   T    ++ + + +  +  ++ +YN++I + CK+  V +   L  EM  K 
Sbjct: 180 LINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQ 239

Query: 231 VRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREAR 290
           +  ++ TY TLI  +C  G   EA+A+ + M+ + I+PD+ T++ LI    +EG+M+ A+
Sbjct: 240 IYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALGKEGKMKAAK 299

Query: 291 RLFRDIKGA--TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
            +   +  A   P+ VTY +L+DGY   N+++ A  +   MA  GV PGV +Y  ++  L
Sbjct: 300 IVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGL 359

Query: 349 CKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ 408
           CK   + +A  L  EM  K + P+ +T N+LI+  CK G  A    + ++M +   + D 
Sbjct: 360 CKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQLADV 419

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
            TY +LI   CK   +D A  L   M+     P   +Y+ L+DG C     +   ++   
Sbjct: 420 ITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLCKGGRLKIAQEVFQH 479

Query: 469 FVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
            + +G  +D+  Y  +I  FCK    D A  L + M+ NG + +++ +  +  A +   E
Sbjct: 480 LLIKGYHLDIRTYTVMISGFCKAGLFDEALALLSKMEDNGCIPNAITFDIIICALFEKDE 539

Query: 529 PKACSDILDDMYRRRLM 545
                 +L +M  R L+
Sbjct: 540 NDKAEKLLREMIARGLL 556



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 126/473 (26%), Positives = 225/473 (47%), Gaps = 29/473 (6%)

Query: 46  VLLN-LYNC-CHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEK 103
           V LN L NC CH+  ++ +F   A      Y   + +  T+I  L      K A    + 
Sbjct: 105 VTLNILINCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDD 164

Query: 104 IALRDF----LSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVH 159
           +   +F    +S  +++N L KI +                     T+  +Q+   +   
Sbjct: 165 VVALEFQLDRISYGTLINGLCKIGE---------------------TKAAIQLMRNLEER 203

Query: 160 NLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKV 219
           ++ P +    ++++SL K++L      +Y +M    +  N+  Y  LI+  C    + + 
Sbjct: 204 SIKPDVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEA 263

Query: 220 EKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHG 279
             LL EM+ K++  D++T++ LI    K+G    A  V   M +  + PD+VTYNSL+ G
Sbjct: 264 VALLNEMKLKNINPDVYTFSILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDG 323

Query: 280 FCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPG 337
           +     ++ A+ +F  +   G TP   +YT +IDG C+   ++EA+ L E M  K V P 
Sbjct: 324 YFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPN 383

Query: 338 VVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKN 397
            +T+NS++  LCK GRI     L+++M ++    D +T ++LI+A CK      A+ +  
Sbjct: 384 TITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQLADVITYSSLIDALCKNCHLDQAIALFK 443

Query: 398 RMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKN 457
           +M+   +  D +TY  LI G CK   + IA+E+   +L  G+     +Y+ ++ G+C   
Sbjct: 444 KMITQEIQPDMYTYTILIDGLCKGGRLKIAQEVFQHLLIKGYHLDIRTYTVMISGFCKAG 503

Query: 458 NEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGIL 510
             +  L LL +    G   +   +  +I    +K++ D A++L   M   G+L
Sbjct: 504 LFDEALALLSKMEDNGCIPNAITFDIIICALFEKDENDKAEKLLREMIARGLL 556



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 98/338 (28%), Positives = 166/338 (49%), Gaps = 2/338 (0%)

Query: 226 MEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGR 285
           ++FK + +DL T N LI  +C  G    + +V   + + G  PD++T  +LI G C  G 
Sbjct: 95  LDFKGITSDLVTLNILINCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGE 154

Query: 286 MREARRLFRDIKGA--TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNS 343
           +++A +   D+       + ++Y TLI+G C+  + + A++L   +  + + P VV YN 
Sbjct: 155 VKKALKFHDDVVALEFQLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNI 214

Query: 344 ILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAG 403
           I+  LCK   + +A  L +EMN K+I P+ VT  TLI  +C +G    A+ + N M    
Sbjct: 215 IIDSLCKNKLVGEACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKN 274

Query: 404 LMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALL 463
           +  D +T+  LI    K  +M  AK +L  M+ A   P   +Y+ LVDGY   N  +   
Sbjct: 275 INPDVYTFSILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAK 334

Query: 464 KLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAY 523
            + +     G+   V  Y  +I   CK + VD A  LF  M+   ++ +++ + SL    
Sbjct: 335 YVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGL 394

Query: 524 WRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKD 561
            ++G      D++D M  R  +  +  Y S   +  K+
Sbjct: 395 CKSGRIAYVWDLVDKMRDRSQLADVITYSSLIDALCKN 432



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 110/393 (27%), Positives = 179/393 (45%), Gaps = 2/393 (0%)

Query: 170 VLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFK 229
           +L+N         + + V   +++ G   ++     LI   C   +V K  K   ++   
Sbjct: 109 ILINCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVAL 168

Query: 230 DVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA 289
           + + D  +Y TLI   CK G    A+ +   +E   I PD+V YN +I   C+   + EA
Sbjct: 169 EFQLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEA 228

Query: 290 RRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRK 347
             L+ ++  K   PN VTYTTLI G+C    L EA+ L   M  K + P V T++ ++  
Sbjct: 229 CNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDA 288

Query: 348 LCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLD 407
           L KEG+++ A  +L  M +  + PD VT N+L++ Y  + +   A  V N M ++G+   
Sbjct: 289 LGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPG 348

Query: 408 QFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLD 467
             +Y  +I G CK K +D A  L   M      P+  +++ L+DG C       +  L+D
Sbjct: 349 VQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVD 408

Query: 468 EFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
           +   R    DV  Y +LI   CK   +D A  LF  M    I  D   YT L     + G
Sbjct: 409 KMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLCKGG 468

Query: 528 EPKACSDILDDMYRRRLMITLKIYRSFSASYAK 560
             K   ++   +  +   + ++ Y    + + K
Sbjct: 469 RLKIAQEVFQHLLIKGYHLDIRTYTVMISGFCK 501



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 108/388 (27%), Positives = 183/388 (47%), Gaps = 2/388 (0%)

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
           Y N     D + +F++M +    P       +L+SL K +       + K +   G+ ++
Sbjct: 44  YNNHNDHNDAVALFNRMLLMRPPPPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSD 103

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
           +   N+LI+  C    +     +L  +  +    D+ T  TLI   C +G   +AL   D
Sbjct: 104 LVTLNILINCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHD 163

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRAN 317
            +       D ++Y +LI+G C+ G  + A +L R++  +   P+ V Y  +ID  C+  
Sbjct: 164 DVVALEFQLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNK 223

Query: 318 DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCN 377
            + EA  L   M AK +YP VVTY +++   C  G + +A  LLNEM  K I PD  T +
Sbjct: 224 LVGEACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFS 283

Query: 378 TLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA 437
            LI+A  K G   +A  V   M++A +  D  TY +L+ G+    E+  AK +   M  +
Sbjct: 284 ILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQS 343

Query: 438 GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYA 497
           G +P   SY+ ++DG C     +  + L +E   + +  +   + +LI   CK  ++ Y 
Sbjct: 344 GVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYV 403

Query: 498 QRLFNLMQGNGILGDSVIYTSLAYAYWR 525
             L + M+    L D + Y+SL  A  +
Sbjct: 404 WDLVDKMRDRSQLADVITYSSLIDALCK 431



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 63/264 (23%), Positives = 111/264 (42%)

Query: 301 PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRL 360
           P    +  ++    +      A+ L + +  KG+   +VT N ++   C  G+I  +  +
Sbjct: 67  PPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSDLVTLNILINCFCHLGQITLSFSV 126

Query: 361 LNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCK 420
           L  + ++   PD +T  TLI   C  G+   A+K  + ++     LD+ +Y  LI+G CK
Sbjct: 127 LATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALEFQLDRISYGTLINGLCK 186

Query: 421 AKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSV 480
             E   A +L+  + +    P    Y+ ++D  C          L  E  ++ +  +V  
Sbjct: 187 IGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVT 246

Query: 481 YRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMY 540
           Y  LI  FC    +  A  L N M+   I  D   ++ L  A  + G+ KA   +L  M 
Sbjct: 247 YTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALGKEGKMKAAKIVLAVMM 306

Query: 541 RRRLMITLKIYRSFSASYAKDNEI 564
           +  +   +  Y S    Y   NE+
Sbjct: 307 KAYVKPDVVTYNSLVDGYFLVNEV 330


>gi|115446945|ref|NP_001047252.1| Os02g0582300 [Oryza sativa Japonica Group]
 gi|50253069|dbj|BAD29317.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113536783|dbj|BAF09166.1| Os02g0582300 [Oryza sativa Japonica Group]
          Length = 845

 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 123/406 (30%), Positives = 192/406 (47%), Gaps = 9/406 (2%)

Query: 156 MRVHNLMPHL------HACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVA-NIHLYNVLIH 208
           +R+H+L P             LL  L++  L  +  +++  M +    A     YN +I 
Sbjct: 102 LRLHSLSPPPLRPLFDRPFASLLAHLSRFALAPLALRLFAHMHRHAPPAPTAPTYNAVIR 161

Query: 209 ACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISP 268
           + C+ +D+ +  + L  M     R D +T+N+LI  YC+      A  + D+M   G + 
Sbjct: 162 SLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQ 221

Query: 269 DIVTYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
           D+V+Y +LI G C  GR+ EA  LF ++    P+   Y  L+ G C A   EE L +   
Sbjct: 222 DVVSYATLIEGLCEAGRIDEAVELFGEMD--QPDMHMYAALVKGLCNAERGEEGLLMLRR 279

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M   G  P    Y +++   C+E + ++A  +L EM EK +AP  VTC  +INAYCK G 
Sbjct: 280 MKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGR 339

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
            + A++V   M   G   + +TY AL+ GFC   ++  A  LL  M   G +P   +Y+ 
Sbjct: 340 MSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNL 399

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG 508
           L+ G C   + E+  +LL      GL  D   Y ALI   CK  + D A  LF+ ++  G
Sbjct: 400 LIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRG 459

Query: 509 ILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSF 554
           I  ++V + SL     ++G+       L+ M           Y SF
Sbjct: 460 IKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSF 505



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 113/394 (28%), Positives = 187/394 (47%), Gaps = 6/394 (1%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           + +++F +M      P +H    L+  L      +    + ++M +LG   +   Y  ++
Sbjct: 241 EAVELFGEMD----QPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVV 296

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
              C+     + E++L EM  K +   + T   +I  YCK+G   +AL V + M+  G  
Sbjct: 297 DFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCK 356

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRL 325
           P++ TYN+L+ GFC EG++ +A  L   ++  G  P+ VTY  LI G C    +E A RL
Sbjct: 357 PNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRL 416

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
             +M   G+     TYN+++  LCK+GR   A  L + +  + I P+ VT N+LIN  CK
Sbjct: 417 LRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCK 476

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            G    A K   +M+ AG   D +TY + I   CK K        +  ML     PS  +
Sbjct: 477 SGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVN 536

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+ ++     + N   + +   E VS G   DV  Y   +R +C + +++ A+ +   M 
Sbjct: 537 YTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMS 596

Query: 506 GNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
            NG+  D++ Y +L   +   G+      IL  M
Sbjct: 597 KNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQM 630



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 115/446 (25%), Positives = 205/446 (45%), Gaps = 8/446 (1%)

Query: 116 LNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSL 175
           L+ +V+    PD  ++  + L++ Y           +FD+M +      + +   L+  L
Sbjct: 176 LSLMVRSGWRPD--AYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGL 233

Query: 176 AKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADL 235
            +    D   +++ +M Q     ++H+Y  L+   C +   ++   +L  M+    R   
Sbjct: 234 CEAGRIDEAVELFGEMDQ----PDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPST 289

Query: 236 FTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR- 294
             Y  ++   C++    EA  +   M  +G++P +VT  ++I+ +C+EGRM +A R+   
Sbjct: 290 RAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLEL 349

Query: 295 -DIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGR 353
             ++G  PN  TY  L+ G+C    + +A+ L   M A GV P  VTYN ++R  C +G 
Sbjct: 350 MKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGH 409

Query: 354 IRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKA 413
           I  A RLL  M    +  D  T N LINA CK G T  A  + + +   G+  +  T+ +
Sbjct: 410 IESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNS 469

Query: 414 LIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
           LI+G CK+ + DIA + L  M+ AG +P   +YS  ++  C     +  L  + E + + 
Sbjct: 470 LINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKD 529

Query: 474 LCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACS 533
           +      Y  +I +  K+       R +  M  +G   D V YT+   AY   G      
Sbjct: 530 VKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAE 589

Query: 534 DILDDMYRRRLMITLKIYRSFSASYA 559
           ++L +M +  + +    Y +    +A
Sbjct: 590 NVLMEMSKNGVTVDTMAYNTLMDGHA 615



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 111/451 (24%), Positives = 197/451 (43%), Gaps = 21/451 (4%)

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKD-RLTDMVWKVYKKMVQL 194
           +V F    +  ++  ++  +M    L P +  CT ++N+  K+ R++D + +V + M   
Sbjct: 295 VVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDAL-RVLELMKLR 353

Query: 195 GVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEA 254
           G   N+  YN L+   C    V K   LL +M    V  D  TYN LI   C  G    A
Sbjct: 354 GCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESA 413

Query: 255 LAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDG 312
             +   ME +G+  D  TYN+LI+  C++GR  +A  LF  +  +G  PN VT+ +LI+G
Sbjct: 414 FRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLING 473

Query: 313 YCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPD 372
            C++   + A +  E M + G  P   TY+S +  LCK    ++    + EM +K + P 
Sbjct: 474 LCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPS 533

Query: 373 NVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLF 432
            V    +I+   K  +     +    M+ +G   D  TY   +  +C    ++ A+ +L 
Sbjct: 534 TVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLM 593

Query: 433 GMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKE 492
            M   G +    +Y+ L+DG+ +    +  + +L +  S     +   Y  L+R   +  
Sbjct: 594 EMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMR 653

Query: 493 KVDYAQR-----------------LFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDI 535
            V+                     LF++M+ N  L +S  Y+S+   +   G  +  + +
Sbjct: 654 LVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSL 713

Query: 536 LDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
           +  M    + +   IY +    + K    LD
Sbjct: 714 VSLMKEDSISLNEDIYTALVTCFCKSKRYLD 744



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 131/571 (22%), Positives = 230/571 (40%), Gaps = 93/571 (16%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHV 132
            ++ S +++  ++    + +  K A+ ML+++  +     P V+     I+         
Sbjct: 284 GWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGL--APCVVTCTAVINA-------- 333

Query: 133 LSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMV 192
                  Y       D L+V + M++    P++     L+     +        +  KM 
Sbjct: 334 -------YCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMR 386

Query: 193 QLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHY 252
             GV  +   YN+LI   C    ++   +LL  ME   + AD +TYN LI   CK G   
Sbjct: 387 ACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTD 446

Query: 253 EALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLI 310
           +A ++ D +E  GI P+ VT+NSLI+G C+ G+   A +    +   G TP+  TY++ I
Sbjct: 447 QACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFI 506

Query: 311 DGYCRANDLEEAL-----------------------------------RLREVMAAKGVY 335
           +  C+    +E L                                   R    M + G  
Sbjct: 507 EHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCN 566

Query: 336 PGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKV 395
           P VVTY + +R  C EGR+ +A  +L EM++  +  D +  NTL++ +  IG T  A+ +
Sbjct: 567 PDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSI 626

Query: 396 KNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL-------------LFGMLDA----G 438
             +M     + +QFTY  L+    + + ++    L             +FG+ D      
Sbjct: 627 LKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNE 686

Query: 439 FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQ 498
           F P+  +YS +++G+      E    L+       + ++  +Y AL+  FCK ++   A 
Sbjct: 687 FLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAW 746

Query: 499 RLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASY 558
            L   M  +G +   + Y  L       G+     +I                  F  S 
Sbjct: 747 VLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEI------------------FMNSR 788

Query: 559 AKDNEILDLFWSHVVDRGLMSK---HIFKEM 586
            KD    ++ W  ++D GL+ K    I +EM
Sbjct: 789 WKDYSPDEIVWKVIID-GLIKKGHSDISREM 818



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 98/229 (42%), Gaps = 4/229 (1%)

Query: 336 PGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKV 395
           P   TYN+++R LC+   +  A R L+ M      PD  T N+LI  YC+      A  +
Sbjct: 151 PTAPTYNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDL 210

Query: 396 KNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCN 455
            ++M   G   D  +Y  LI G C+A  +D A E LFG +D    P    Y+ LV G CN
Sbjct: 211 FDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVE-LFGEMD---QPDMHMYAALVKGLCN 266

Query: 456 KNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVI 515
               E  L +L      G       Y A++   C++ K   A+ +   M   G+    V 
Sbjct: 267 AERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVT 326

Query: 516 YTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
            T++  AY + G       +L+ M  R     +  Y +    +  + ++
Sbjct: 327 CTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKV 375



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 54/227 (23%), Positives = 105/227 (46%), Gaps = 5/227 (2%)

Query: 341 YNSILRKLCKEGRIRDANRLLNEMNE-KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRM 399
           + S+L  L +      A RL   M+     AP   T N +I + C+  D A A++  + M
Sbjct: 120 FASLLAHLSRFALAPLALRLFAHMHRHAPPAPTAPTYNAVIRSLCRRADLARALRYLSLM 179

Query: 400 LEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNE 459
           + +G   D +T+ +LI G+C+  ++D+A++L   M   GF+    SY+ L++G C     
Sbjct: 180 VRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRI 239

Query: 460 EALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
           +  ++L  E        D+ +Y AL++  C  E+ +    +   M+  G    +  Y ++
Sbjct: 240 DEAVELFGEMDQP----DMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAV 295

Query: 520 AYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
                R  + K   ++L +M+ + L   +    +   +Y K+  + D
Sbjct: 296 VDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSD 342



 Score = 43.9 bits (102), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 35/166 (21%), Positives = 69/166 (41%), Gaps = 2/166 (1%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D   +FD M+ +  +P+    + +L   ++D  T+    +   M +  +  N  +Y  L+
Sbjct: 674 DVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALV 733

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
              CKS        L+C M        L +Y  L++    +G   +A  +      +  S
Sbjct: 734 TCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYS 793

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLID 311
           PD + +  +I G  ++G    +R +   ++     P+H TY  L +
Sbjct: 794 PDEIVWKVIIDGLIKKGHSDISREMIIMLERMNCRPSHQTYAMLTE 839


>gi|148906470|gb|ABR16388.1| unknown [Picea sitchensis]
          Length = 700

 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 150/553 (27%), Positives = 242/553 (43%), Gaps = 29/553 (5%)

Query: 3   SLVALNSDT--KFIKTISAIMLKGHWAKLLNPNIASSLTSTAIHKVLLNLYNCCHIPSLS 60
           +LV    DT  K  K I     +      LN ++A  L   A+ KVL    N       +
Sbjct: 145 ALVVQQEDTVNKICKAIEEDQWECLQDNFLN-SMAQDLNPDAVVKVL----NLQTDAQNA 199

Query: 61  CAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALV 120
             FF+WA+     Y H+  +++TMI IL + K F   Q++L+K+  +    T S+L++ V
Sbjct: 200 LRFFQWADKQ-EGYDHNTDAYFTMIDILGRAKMFTELQSLLQKMQTQGREITRSMLHSFV 258

Query: 121 KIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHL--HACTVLLNSLAKD 178
                            + Y      ++ L+ F+ M+     P L   A   +L SL K+
Sbjct: 259 -----------------MSYGRSGRFKESLEAFNLMKEMGYEPGLIDTAYNSVLVSLVKN 301

Query: 179 RLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTY 238
           +  DM   ++ +M+  GV  N   Y  +I        ++   KLL +M   +   D+ TY
Sbjct: 302 KKLDMAENLFAQMINNGVSCNNLTYTSMIQCFFLKEKMEDAMKLLDDMIQNNYAPDVVTY 361

Query: 239 NTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRL--FRDI 296
             +I+  CK+ M  +A  V  +M   G  P+I TYN+LI G C   R  EA  L    + 
Sbjct: 362 TIVISALCKRKMIEQAYGVLQKMRENGCEPNIYTYNALIQGLCAVRRPEEALELVTLMEQ 421

Query: 297 KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRD 356
            G  PN  TYT L  G C+   L+ A  +     A+G+ P  VTYN++L   C+  R+ +
Sbjct: 422 GGVPPNIYTYTILTHGLCKLRRLDRAKEMFNEALARGLKPNRVTYNTLLNGYCRGSRLIE 481

Query: 357 ANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIH 416
           A  +L EM++    PD+VT  TLI    +      A+++ + M   G  ++  T   L  
Sbjct: 482 AMDILKEMHQNDCTPDHVTYTTLIQGLVQGNQLPDALRMHDEMENKGYDVNFDTLNILAR 541

Query: 417 GFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCV 476
           G  +      A      M D GF+ S   Y   +         E    LL E +++G   
Sbjct: 542 GLARVGNHKDASIFYRRMKDRGFAYSASDYYLAIHCLSTAGEMEEAQALLYEMINKGYSP 601

Query: 477 DVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDIL 536
           +++ Y  +I+ FC++ ++D A  + N M  NGI  D+  Y  L   +   G  +    + 
Sbjct: 602 NLTTYNTMIKGFCRQGRLDDADAMLNFMIENGIGPDTGSYNILIKEFHNQGRTQDADQLY 661

Query: 537 DDMYRRRLMITLK 549
                R +++  K
Sbjct: 662 ATALERGVVLNPK 674



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 85/348 (24%), Positives = 154/348 (44%), Gaps = 5/348 (1%)

Query: 222 LLCEMEFKDVRADLFTYNTLIALYCKKGMHY-EALAVQDRMEREGISPDIVTYNSLIHGF 280
           L+ EM ++    D    + L++L   K +   E L  Q  M   G+S + +TY S+I  F
Sbjct: 276 LMKEMGYEPGLIDTAYNSVLVSLVKNKKLDMAENLFAQ--MINNGVSCNNLTYTSMIQCF 333

Query: 281 CREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGV 338
             + +M +A +L  D+      P+ VTYT +I   C+   +E+A  + + M   G  P +
Sbjct: 334 FLKEKMEDAMKLLDDMIQNNYAPDVVTYTIVISALCKRKMIEQAYGVLQKMRENGCEPNI 393

Query: 339 VTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNR 398
            TYN++++ LC   R  +A  L+  M +  + P+  T   L +  CK+     A ++ N 
Sbjct: 394 YTYNALIQGLCAVRRPEEALELVTLMEQGGVPPNIYTYTILTHGLCKLRRLDRAKEMFNE 453

Query: 399 MLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNN 458
            L  GL  ++ TY  L++G+C+   +  A ++L  M     +P + +Y+ L+ G    N 
Sbjct: 454 ALARGLKPNRVTYNTLLNGYCRGSRLIEAMDILKEMHQNDCTPDHVTYTTLIQGLVQGNQ 513

Query: 459 EEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTS 518
               L++ DE  ++G  V+      L R   +      A   +  M+  G    +  Y  
Sbjct: 514 LPDALRMHDEMENKGYDVNFDTLNILARGLARVGNHKDASIFYRRMKDRGFAYSASDYYL 573

Query: 519 LAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
             +    AGE +    +L +M  +     L  Y +    + +   + D
Sbjct: 574 AIHCLSTAGEMEEAQALLYEMINKGYSPNLTTYNTMIKGFCRQGRLDD 621


>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 761

 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 119/451 (26%), Positives = 208/451 (46%), Gaps = 49/451 (10%)

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
           P L + +++++ L KDR  D   +++K+M   G++ ++  Y  LIH  C S   +K + L
Sbjct: 300 PTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCL 359

Query: 223 LCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR 282
             EM    ++ D+ T + LI + CKKG   EA  + + + + G  PD+VT  +L+ G C 
Sbjct: 360 FNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCM 419

Query: 283 EGRMREARRLFRDIK-------------------------------------------GA 299
           + R+ +A +LF  ++                                             
Sbjct: 420 KHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINC 479

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
            PN ++Y+ +IDG C+    +EA  L + M A GV P V++Y S++   C+ G+ +DA  
Sbjct: 480 KPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKY 539

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
           L NEM +  + PD  T + LI+  CK G    A ++   M++ G + +  TY  L+ G C
Sbjct: 540 LFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLC 599

Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS------RG 473
               +  A +L   M   G  P   +Y  L+ G C   N +  L+L  + +S        
Sbjct: 600 MNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTN 659

Query: 474 LCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACS 533
              DV  Y  +I   CK  + D A+ LF  M+  G++ + + YTSL + + R+G+ +   
Sbjct: 660 FKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAK 719

Query: 534 DILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
            + ++M  + + +    Y      + K+ +I
Sbjct: 720 HLFNEMVDQGVQLNAVTYSVMIHGFCKEGQI 750



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 110/361 (30%), Positives = 181/361 (50%), Gaps = 18/361 (4%)

Query: 162 MPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEK 221
           +P +  CT L+  L          +++ KM +LG + N+     L+   C+S ++ K+  
Sbjct: 404 IPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNI-KIAL 462

Query: 222 LLCEMEFKDV-------RADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYN 274
            L +    D        + +  +Y+ +I   CK G   EA  +   M+  G+ PD+++Y 
Sbjct: 463 ELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYT 522

Query: 275 SLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAK 332
           SLIHGFCR G+ ++A+ LF ++   G  P+  T++ LID  C+   + EA  L EVM  +
Sbjct: 523 SLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQR 582

Query: 333 GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
           G  P  VTY ++++ LC   RI +A +L  +M +    PD VT  TL+   C+ G+  +A
Sbjct: 583 GCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTA 642

Query: 393 MKVKNRMLE------AGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSY 446
           +++  +ML            D  +Y  +I G CK    D A+EL   M   G  P+  SY
Sbjct: 643 LELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISY 702

Query: 447 SWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQG 506
           + L+ G+C     E    L +E V +G+ ++   Y  +I  FCK+ ++D A  LF  M+ 
Sbjct: 703 TSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKA--LFQKMEA 760

Query: 507 N 507
           N
Sbjct: 761 N 761



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 122/426 (28%), Positives = 205/426 (48%), Gaps = 49/426 (11%)

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
           P L + +++++ L KDR  D   +++K+M   G++ ++  Y  LIH  C+S   +K + L
Sbjct: 119 PTLVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCL 178

Query: 223 LCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR 282
             EM    +R+D+ T + LI + CK+G   EA  + + M + G   DIVTY++LI G C 
Sbjct: 179 FNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCM 238

Query: 283 EGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRL--------------- 325
           + R+ EA RLF  ++  G  P+ + Y TL+ G C+  ++  AL+L               
Sbjct: 239 KHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKC 298

Query: 326 -----------------------REV---MAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
                                  RE+   M A+G+ P V++Y +++   C  G+   A  
Sbjct: 299 KPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKC 358

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
           L NEM +  I PD  T + LI+  CK G    A K+   +++ G + D  T   L+ G C
Sbjct: 359 LFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLC 418

Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKL----LDEFVSRGL- 474
               +  A +L   M   G  P+  + + L+ G C   N +  L+L    L +    G+ 
Sbjct: 419 MKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGIN 478

Query: 475 CVDVSV-YRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACS 533
           C   ++ Y  +I   CK  + D A+ LF  M+  G++ D + YTSL + + R+G+ K   
Sbjct: 479 CKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAK 538

Query: 534 DILDDM 539
            + ++M
Sbjct: 539 YLFNEM 544



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 106/352 (30%), Positives = 170/352 (48%), Gaps = 14/352 (3%)

Query: 191 MVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGM 250
           M+ +G+  ++    VLI   CK   V +  +LL  M  +    D+ TY+TLI   C K  
Sbjct: 1   MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHR 60

Query: 251 HYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGAT--------PN 302
             EA  +   M++ G  PD + Y +L+ G C+ G++  A  L +++   T        P 
Sbjct: 61  ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPT 120

Query: 303 HVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLN 362
            V+Y+ +IDG C+    +EA  L + M A+G+ P V++Y S++   C+ G+   A  L N
Sbjct: 121 LVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFN 180

Query: 363 EMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAK 422
           EM +  I  D  T + LI+  CK G    A ++   M++ G +LD  TY  LI G C   
Sbjct: 181 EMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKH 240

Query: 423 EMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSR----GLCVDV 478
            +  A  L   M   G  P   +Y  L+ G C   N    L+L  E ++     G+    
Sbjct: 241 RISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKP 300

Query: 479 SV--YRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
           ++  Y  +I   CK  + D A+ LF  M+  GI+ D + YT+L + +  +G+
Sbjct: 301 TLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGK 352



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 159/286 (55%), Gaps = 11/286 (3%)

Query: 160 NLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKV 219
           N  P+  + +++++ L K    D   +++K+M  LGV+ ++  Y  LIH  C+S      
Sbjct: 478 NCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDA 537

Query: 220 EKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHG 279
           + L  EM    V+ D+ T++ LI + CK+G   EA  + + M + G  P+ VTY +L+ G
Sbjct: 538 KYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKG 597

Query: 280 FCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRL-REVMAAKGVY- 335
            C   R+ EA +LF  ++  G  P+ VTY TL+ G C+  +++ AL L +++++  G Y 
Sbjct: 598 LCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYG 657

Query: 336 ----PGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTAS 391
               P V++Y+ I+  LCK GR  +A  L  EM    + P+ ++  +LI+ +C+ G    
Sbjct: 658 TNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLED 717

Query: 392 AMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA 437
           A  + N M++ G+ L+  TY  +IHGFCK  ++D A   LF  ++A
Sbjct: 718 AKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKA---LFQKMEA 760



 Score = 38.9 bits (89), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 18/68 (26%), Positives = 37/68 (54%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           ++F +M+   ++P++ + T L++   +    +    ++ +MV  GV  N   Y+V+IH  
Sbjct: 685 ELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGF 744

Query: 211 CKSSDVDK 218
           CK   +DK
Sbjct: 745 CKEGQIDK 752


>gi|22135795|gb|AAM91084.1| AT4g28010/T13J8_120 [Arabidopsis thaliana]
          Length = 704

 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 164/612 (26%), Positives = 260/612 (42%), Gaps = 65/612 (10%)

Query: 28  KLLNPNIASSLTSTAIHKVLLNLYNCCHI--PSLSCAFFKWAESAVPNYKHSLQSHWTMI 85
           KLLNP + S L + A  +    L + C    P L  A   + ++       +      M 
Sbjct: 22  KLLNPRVYSKLVN-AFSETETKLRSLCEDSNPQLKNAVSVFQQAVDSGSSLAFAGSNLMA 80

Query: 86  HILTKNKH---FKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYA- 141
            ++    H   F   + MLE     +F+S   +L   V++         +   L   +A 
Sbjct: 81  KLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAF 140

Query: 142 ---NLKMTQDGL----------QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
              N  +   GL           +  +MR ++LMP + +   ++    + +  +   ++ 
Sbjct: 141 NVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELA 200

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
            +M   G   ++  + +LI A CK+  +D+    L EM+F  + ADL  Y +LI  +C  
Sbjct: 201 NEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDC 260

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTY 306
           G      A+ D +   G SP  +TYN+LI GFC+ G+++EA  +F  +  +G  PN  TY
Sbjct: 261 GELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTY 320

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
           T LIDG C     +EAL+   +M  K   P  VTYN I+ KLCK+G + DA  ++  M +
Sbjct: 321 TGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKK 380

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ--FTYKALIHGFCK---- 420
           ++  PDN+T N L+   C  GD   A K+   ML+     D    +Y ALIHG CK    
Sbjct: 381 RRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRL 440

Query: 421 -------------------------------AKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
                                          A +++ A EL   + D+    +  +Y+ +
Sbjct: 441 HQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAM 500

Query: 450 VDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGI 509
           +DG+C          LL +     L   V  Y  L+   CK+  +D A RLF  MQ +  
Sbjct: 501 IDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNN 560

Query: 510 LGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAK----DNEIL 565
             D V +  +     +AG+ K+   +L  M R  L   L  Y      + K    D  I 
Sbjct: 561 FPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAI- 619

Query: 566 DLFWSHVVDRGL 577
             F+  +VD G 
Sbjct: 620 -SFFDKMVDSGF 630



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 114/384 (29%), Positives = 179/384 (46%), Gaps = 13/384 (3%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N +  + L+     +  T++ LQ  + M   +  P+     +++N L KD L     ++ 
Sbjct: 316 NVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIV 375

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKD---VRADLFTYNTLIALY 245
           + M +     +   YN+L+   C   D+D+  KLL  M  KD      D+ +YN LI   
Sbjct: 376 ELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLM-LKDSSYTDPDVISYNALIHGL 434

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGA--TPNH 303
           CK+   ++AL + D +  +  + D VT N L++   + G + +A  L++ I  +    N 
Sbjct: 435 CKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNS 494

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
            TYT +IDG+C+   L  A  L   M    + P V  YN +L  LCKEG +  A RL  E
Sbjct: 495 DTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEE 554

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
           M      PD V+ N +I+   K GD  SA  +   M  AGL  D FTY  LI+ F K   
Sbjct: 555 MQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGY 614

Query: 424 MDIAKELLFGMLDAGFSPS--YCSYSWLVDGYCNKNNE-EALLKLLDEFVSRGLCVDVSV 480
           +D A      M+D+GF P    C     V  YC    E + L +L+ + V + + +D  +
Sbjct: 615 LDEAISFFDKMVDSGFEPDAHICDS---VLKYCISQGETDKLTELVKKLVDKDIVLDKEL 671

Query: 481 YRALIRRFCKKE-KVDYAQRLFNL 503
              ++   C     +D A+RL  +
Sbjct: 672 TCTVMDYMCNSSANMDLAKRLLRV 695



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 103/402 (25%), Positives = 179/402 (44%), Gaps = 4/402 (0%)

Query: 149 GLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIH 208
           G  +FD++      P       L+    K        ++++ M++ GV  N++ Y  LI 
Sbjct: 266 GKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLID 325

Query: 209 ACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISP 268
             C      +  + L  M  KD   +  TYN +I   CK G+  +A+ + + M++    P
Sbjct: 326 GLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRP 385

Query: 269 DIVTYNSLIHGFCREGRMREARRLF----RDIKGATPNHVTYTTLIDGYCRANDLEEALR 324
           D +TYN L+ G C +G + EA +L     +D     P+ ++Y  LI G C+ N L +AL 
Sbjct: 386 DNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALD 445

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           + +++  K      VT N +L    K G +  A  L  ++++ KI  ++ T   +I+ +C
Sbjct: 446 IYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFC 505

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           K G    A  +  +M  + L    F Y  L+   CK   +D A  L   M      P   
Sbjct: 506 KTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVV 565

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
           S++ ++DG     + ++   LL      GL  D+  Y  LI RF K   +D A   F+ M
Sbjct: 566 SFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKM 625

Query: 505 QGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMI 546
             +G   D+ I  S+       GE    ++++  +  + +++
Sbjct: 626 VDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVL 667



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 88/355 (24%), Positives = 167/355 (47%), Gaps = 4/355 (1%)

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           L+  +  L   ++  ++F+ M    + P+++  T L++ L     T    +    M++  
Sbjct: 288 LIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKD 347

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
              N   YN++I+  CK   V    +++  M+ +  R D  TYN L+   C KG   EA 
Sbjct: 348 EEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEAS 407

Query: 256 AVQDRMEREG--ISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLID 311
            +   M ++     PD+++YN+LIHG C+E R+ +A  ++  +  K    + VT   L++
Sbjct: 408 KLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLN 467

Query: 312 GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAP 371
              +A D+ +A+ L + ++   +     TY +++   CK G +  A  LL +M   ++ P
Sbjct: 468 STLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQP 527

Query: 372 DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
                N L+++ CK G    A ++   M       D  ++  +I G  KA ++  A+ LL
Sbjct: 528 SVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLL 587

Query: 432 FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
            GM  AG SP   +YS L++ +      +  +   D+ V  G   D  +  ++++
Sbjct: 588 VGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLK 642


>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
 gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
          Length = 758

 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 119/417 (28%), Positives = 189/417 (45%), Gaps = 2/417 (0%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           + ++M  H + P     T L+    ++   +   +V  KM++ G        NVLI+  C
Sbjct: 219 MLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYC 278

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           K   V+     + +        D  TYNT +   C+ G    AL V D M +EG  PD+ 
Sbjct: 279 KMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVF 338

Query: 272 TYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           TYN++I+   + G + EA+ +   +  +G  P+  T+ TLI      N LEEAL L   +
Sbjct: 339 TYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLAREL 398

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
             KG+ P V T+N ++  LCK G      RL  EM      PD VT N LI+  C +G  
Sbjct: 399 TVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKL 458

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
            +A+ + N M   G      TY  +I   CK   ++ A+E+   M   G S S  +++ L
Sbjct: 459 GNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTL 518

Query: 450 VDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGI 509
           +DG C     +   +L+++ V  GL  +   Y +++  +CK+  +  A  +   M  NG 
Sbjct: 519 IDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGF 578

Query: 510 LGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
             D V Y +L     +AG  +    +L  M  + +  T K Y     S  + N + D
Sbjct: 579 EIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRD 635



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 126/440 (28%), Positives = 206/440 (46%), Gaps = 9/440 (2%)

Query: 132 VLSWLVIFYANLKMTQDGLQ-VFDQMRVHNLMPHLHACTV----LLNSLAKDRLTDMVWK 186
           V+   V  YA L+   D +  V +Q+   N    + A TV    LLN L +     ++  
Sbjct: 126 VVRSFVESYARLRRFDDAVDLVLNQL--DNDTFGVQADTVVFNHLLNVLVEGSKLKLLES 183

Query: 187 VYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYC 246
           VY +M   G+  ++   N LI A C++  V     +L EM    V  D  T+ TL+  + 
Sbjct: 184 VYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFI 243

Query: 247 KKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHV 304
           ++G    AL V+ +M   G SP  VT N LI+G+C+ GR+ +A    +     G  P+ V
Sbjct: 244 EEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQV 303

Query: 305 TYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM 364
           TY T + G C+   +  AL++ ++M  +G  P V TYN+++  L K G + +A  ++N+M
Sbjct: 304 TYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQM 363

Query: 365 NEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEM 424
            ++   PD  T NTLI A         A+ +   +   GL  D +T+  LI+  CK  + 
Sbjct: 364 VDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDP 423

Query: 425 DIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRAL 484
            +   L   M  +G +P   +Y+ L+D  C+       L LL+E  S G       Y  +
Sbjct: 424 HLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTI 483

Query: 485 IRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL 544
           I   CKK +++ A+ +F+ M   GI   +V + +L     +A      +++++ M +  L
Sbjct: 484 IDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGL 543

Query: 545 MITLKIYRSFSASYAKDNEI 564
                 Y S    Y K   I
Sbjct: 544 QPNNITYNSILTHYCKQGNI 563



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 109/360 (30%), Positives = 179/360 (49%), Gaps = 7/360 (1%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           L+V D M      P +     ++N L+K+   D    +  +MV  G + +   +N LI A
Sbjct: 322 LKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVA 381

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
               + +++   L  E+  K +  D++T+N LI   CK G  +  + + + M+  G +PD
Sbjct: 382 LSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPD 441

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLRE 327
            VTYN LI   C  G++  A  L  +++  G   + VTY T+ID  C+   +EEA  + +
Sbjct: 442 EVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFD 501

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
            M A+G+    VT+N+++  LCK  RI DA  L+ +M ++ + P+N+T N+++  YCK G
Sbjct: 502 QMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQG 561

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
           +   A  +   M   G  +D  TY  LI+G CKA    +A +LL GM   G  P+  +Y+
Sbjct: 562 NIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYN 621

Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCK-----KEKVDYAQRLFN 502
            ++     +NN    L L  E    G   D   Y+ + R  C+     KE  D+   + N
Sbjct: 622 PVIQSLFRRNNLRDALNLFREMTEVGEPPDALTYKIVFRSLCRGGGPIKEAFDFLVEMVN 681



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 128/438 (29%), Positives = 204/438 (46%), Gaps = 9/438 (2%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAK-DRLTDMVWKVYKKMVQLGVVANIHLYNVLIH 208
           L+V  +M      P      VL+N   K  R+ D +  + +++   G   +   YN  +H
Sbjct: 252 LRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIAD-GFEPDQVTYNTFVH 310

Query: 209 ACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISP 268
             C++  V    K++  M  +    D+FTYNT+I    K G   EA  + ++M   G  P
Sbjct: 311 GLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLP 370

Query: 269 DIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEALRLR 326
           D  T+N+LI     + R+ EA  L R+  +KG +P+  T+  LI+  C+  D    +RL 
Sbjct: 371 DTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLF 430

Query: 327 EVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKI 386
           E M + G  P  VTYN ++  LC  G++ +A  LLNEM         VT NT+I+A CK 
Sbjct: 431 EEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKK 490

Query: 387 GDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSY 446
                A +V ++M   G+     T+  LI G CKAK +D A EL+  M+  G  P+  +Y
Sbjct: 491 MRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITY 550

Query: 447 SWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQG 506
           + ++  YC + N +    +L+   + G  +DV  Y  LI   CK  +   A +L   M+ 
Sbjct: 551 NSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRI 610

Query: 507 NGILGDSVIYTSLAYAYWRAGEPKACSDILDDMY---RRRLMITLKI-YRSFSASYAKDN 562
            GI      Y  +  + +R    +   ++  +M         +T KI +RS         
Sbjct: 611 KGIRPTPKAYNPVIQSLFRRNNLRDALNLFREMTEVGEPPDALTYKIVFRSLCRGGGPIK 670

Query: 563 EILDLFWSHVVDRGLMSK 580
           E  D F   +V++G M +
Sbjct: 671 EAFD-FLVEMVNKGFMPE 687



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 118/424 (27%), Positives = 197/424 (46%), Gaps = 3/424 (0%)

Query: 132 VLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKM 191
            ++ L+  Y  +   +D L    Q       P        ++ L ++       KV   M
Sbjct: 269 TVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLM 328

Query: 192 VQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMH 251
           +Q G   ++  YN +I+   K+ ++D+ + ++ +M  +    D  T+NTLI     +   
Sbjct: 329 LQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRL 388

Query: 252 YEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTL 309
            EAL +   +  +G+SPD+ T+N LI+  C+ G      RLF ++K  G TP+ VTY  L
Sbjct: 389 EEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNIL 448

Query: 310 IDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI 369
           ID  C    L  AL L   M + G     VTYN+I+  LCK+ RI +A  + ++M+ + I
Sbjct: 449 IDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGI 508

Query: 370 APDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKE 429
           +   VT NTLI+  CK      A ++  +M++ GL  +  TY +++  +CK   +  A +
Sbjct: 509 SRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAAD 568

Query: 430 LLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFC 489
           +L  M   GF     +Y  L++G C     +  LKLL     +G+      Y  +I+   
Sbjct: 569 ILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLF 628

Query: 490 KKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEP-KACSDILDDMYRRRLMITL 548
           ++  +  A  LF  M   G   D++ Y  +  +  R G P K   D L +M  +  M   
Sbjct: 629 RRNNLRDALNLFREMTEVGEPPDALTYKIVFRSLCRGGGPIKEAFDFLVEMVNKGFMPEF 688

Query: 549 KIYR 552
             +R
Sbjct: 689 SSFR 692



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 75/267 (28%), Positives = 126/267 (47%), Gaps = 5/267 (1%)

Query: 261 MEREGISPDIVTYNSLIHGFCREGRMREA-----RRLFRDIKGATPNHVTYTTLIDGYCR 315
           M REG     V   S +  + R  R  +A      +L  D  G   + V +  L++    
Sbjct: 115 MRREGHQVRAVVVRSFVESYARLRRFDDAVDLVLNQLDNDTFGVQADTVVFNHLLNVLVE 174

Query: 316 ANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVT 375
            + L+    +   M  +G+ P VVT N++++ LC+  ++R A  +L EM+   +APD  T
Sbjct: 175 GSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETT 234

Query: 376 CNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGML 435
             TL+  + + G   +A++VK +M+EAG      T   LI+G+CK   ++ A   +   +
Sbjct: 235 FTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEI 294

Query: 436 DAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVD 495
             GF P   +Y+  V G C   +    LK++D  +  G   DV  Y  +I    K  ++D
Sbjct: 295 ADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELD 354

Query: 496 YAQRLFNLMQGNGILGDSVIYTSLAYA 522
            A+ + N M   G L D+  + +L  A
Sbjct: 355 EAKGIVNQMVDRGCLPDTTTFNTLIVA 381



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 77/320 (24%), Positives = 137/320 (42%), Gaps = 18/320 (5%)

Query: 261 MEREGISPDIVTYNSLIHGFCR-------EGRMREARRLFRDIKGATPNHVTYTTLIDGY 313
           + RE  +P    Y  ++            EG +RE RR     +G     V   + ++ Y
Sbjct: 80  LAREDFAPSSAVYEEIVQKLGTAGAFDLMEGLVREMRR-----EGHQVRAVVVRSFVESY 134

Query: 314 CRANDLEEALRL---REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIA 370
            R    ++A+ L   +      GV    V +N +L  L +  +++    + NEM  + I 
Sbjct: 135 ARLRRFDDAVDLVLNQLDNDTFGVQADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQ 194

Query: 371 PDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL 430
           PD VT NTLI A C+     +A+ +   M   G+  D+ T+  L+ GF +   ++ A  +
Sbjct: 195 PDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRV 254

Query: 431 LFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCK 490
              M++AG SP+  + + L++GYC     E  L  + + ++ G   D   Y   +   C+
Sbjct: 255 KAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQ 314

Query: 491 KEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKI 550
              V +A ++ +LM   G   D   Y ++     + GE      I++ M  R  +     
Sbjct: 315 NGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTT 374

Query: 551 YRSFSASYAKDN---EILDL 567
           + +   + +  N   E LDL
Sbjct: 375 FNTLIVALSSQNRLEEALDL 394


>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
           Japonica Group]
          Length = 772

 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 120/426 (28%), Positives = 207/426 (48%), Gaps = 5/426 (1%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D L+V D+M      P      V+L +  +        +V + M   G   +    N+++
Sbjct: 129 DALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVL 188

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           +A C+   VD+   LL ++ F    AD+ +YN ++   C      +   + D M R   +
Sbjct: 189 NAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCA 248

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRL 325
           P+IVT+N+LI   CR G       +   +   G TP+   Y T+IDG C+   LE A  +
Sbjct: 249 PNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEI 308

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
              M + G+ P VV YN++L+ LC   R ++A  LL+EM +K    D+VT N L++ +C+
Sbjct: 309 LNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQ 368

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            G     +++  +ML  G M D  TY  +I+GFCK   +D A  LL  M   G  P+  S
Sbjct: 369 NGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVS 428

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+ ++ G C+        +L+ + + +G   +   +  LI   CKK  V+ A  L   M 
Sbjct: 429 YTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQML 488

Query: 506 GNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKD---N 562
            NG   D + Y+++     +AG+ +   ++L+ M  + +     IY S + + +++   N
Sbjct: 489 VNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVN 548

Query: 563 EILDLF 568
           +++ +F
Sbjct: 549 KVIQMF 554



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 110/394 (27%), Positives = 193/394 (48%), Gaps = 2/394 (0%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           ++ D+M   +  P++     L+  L ++ L + V +V  +M + G   +I +Y  +I   
Sbjct: 237 ELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGI 296

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           CK   ++   ++L  M    ++ ++  YNT++   C      EA  +   M ++    D 
Sbjct: 297 CKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDD 356

Query: 271 VTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
           VT+N L+  FC+ G +     L   +   G  P+ +TYTT+I+G+C+   ++EA+ L + 
Sbjct: 357 VTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKS 416

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M++ G  P  V+Y  +L+ LC  GR  DA  L+++M ++   P+ VT NTLIN  CK G 
Sbjct: 417 MSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGL 476

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
              A+++  +ML  G   D  +Y  +I G  KA + + A ELL  M++ G SP+   YS 
Sbjct: 477 VEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSS 536

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG 508
           +      +     ++++ D      +  D  +Y A+I   CK+ + D A   F  M  NG
Sbjct: 537 IACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNG 596

Query: 509 ILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRR 542
            + +   YT L       G  K   ++L ++  R
Sbjct: 597 CMPNESTYTMLIKGLASEGLAKEAQELLSELCSR 630



 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 117/440 (26%), Positives = 202/440 (45%), Gaps = 6/440 (1%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           ++ ++V + M           C ++LN++ +    D    + +K+   G  A+I  YN +
Sbjct: 163 RNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAV 222

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           +   C +     VE+L+ EM   D   ++ T+NTLI   C+ G+      V  +M   G 
Sbjct: 223 LKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGC 282

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALR 324
           +PDI  Y ++I G C+EG +  A  +   +   G  PN V Y T++ G C A   +EA  
Sbjct: 283 TPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEE 342

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           L   M  K      VT+N ++   C+ G +     LL +M      PD +T  T+IN +C
Sbjct: 343 LLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFC 402

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           K G    A+ +   M   G   +  +Y  ++ G C A     A+EL+  M+  G  P+  
Sbjct: 403 KEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPV 462

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
           +++ L++  C K   E  ++LL + +  G   D+  Y  +I    K  K + A  L N+M
Sbjct: 463 TFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVM 522

Query: 505 QGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAK---D 561
              GI  +++IY+S+A A  R G       + D++    +     +Y +  +S  K    
Sbjct: 523 VNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWET 582

Query: 562 NEILDLFWSHVVDRGLMSKH 581
           +  +D F++++V  G M   
Sbjct: 583 DRAID-FFAYMVSNGCMPNE 601



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 101/375 (26%), Positives = 176/375 (46%), Gaps = 42/375 (11%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           +V  QM  H   P +     +++ + K+   ++  ++  +M   G+  N+  YN ++   
Sbjct: 272 EVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGL 331

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           C +    + E+LL EM  KD   D  T+N L+  +C+ G+    + + ++M   G  PD+
Sbjct: 332 CSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDV 391

Query: 271 VTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREV 328
           +TY ++I+GFC+EG + EA  L + +   G  PN V+YT ++ G C A    +A  L   
Sbjct: 392 ITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQ 451

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M  +G  P  VT+N+++  LCK+G +  A  LL +M     +PD ++ +T+I+   K G 
Sbjct: 452 MIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGK 511

Query: 389 TASAMKVKNRMLEAGL-------------------------MLDQFT----------YKA 413
           T  A+++ N M+  G+                         M D             Y A
Sbjct: 512 TEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNA 571

Query: 414 LIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
           +I   CK  E D A +    M+  G  P+  +Y+ L+ G  ++   +   +LL E  SRG
Sbjct: 572 VISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631

Query: 474 LCVDVSVYRALIRRF 488
                ++ + L+R F
Sbjct: 632 -----ALRKHLMRHF 641



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 82/299 (27%), Positives = 140/299 (46%), Gaps = 2/299 (0%)

Query: 231 VRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREAR 290
           V  + +T+  ++   C +G   +AL V D M  +G +P    Y+ ++   CR G  R + 
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166

Query: 291 RLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
           R+   +  KG T +      +++  C    ++EA+ L   +A  G    +V+YN++L+ L
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226

Query: 349 CKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ 408
           C   R  D   L++EM     AP+ VT NTLI   C+ G      +V  +M E G   D 
Sbjct: 227 CMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDI 286

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
             Y  +I G CK   +++A E+L  M   G  P+   Y+ ++ G C+    +   +LL E
Sbjct: 287 RMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSE 346

Query: 469 FVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
              +   +D   +  L+  FC+   VD    L   M  +G + D + YT++   + + G
Sbjct: 347 MFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEG 405



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 72/273 (26%), Positives = 134/273 (49%), Gaps = 1/273 (0%)

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           +V YN+++ G+CR G++  ARRL   +    PN  T+  ++ G C    + +AL + + M
Sbjct: 79  VVAYNAMVAGYCRAGQLAAARRLAAAVP-VPPNAYTFFPVVRGLCTRGRIADALEVLDEM 137

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
           + KG  P    Y+ IL   C+ G  R++ R+L  M+ K    D   CN ++NA C+ G  
Sbjct: 138 SFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCV 197

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
             A+ +  ++   G   D  +Y A++ G C AK     +EL+  M+    +P+  +++ L
Sbjct: 198 DEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTL 257

Query: 450 VDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGI 509
           +   C     E + ++L +    G   D+ +Y  +I   CK+  ++ A  + N M   G+
Sbjct: 258 IGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGL 317

Query: 510 LGDSVIYTSLAYAYWRAGEPKACSDILDDMYRR 542
             + V Y ++      A   K   ++L +M+++
Sbjct: 318 KPNVVCYNTVLKGLCSAERWKEAEELLSEMFQK 350



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 87/372 (23%), Positives = 156/372 (41%), Gaps = 56/372 (15%)

Query: 71  VPNY--KHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDG 128
           +P+Y  K ++  + T++  L   + +K A+ +L ++  +D        N LV        
Sbjct: 312 MPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVD------- 364

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
                     F+    +    +++ +QM  H  MP +   T ++N   K+ L D    + 
Sbjct: 365 ----------FFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLL 414

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
           K M   G   N   Y +++   C +      E+L+ +M  +    +  T+NTLI   CKK
Sbjct: 415 KSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKK 474

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTY 306
           G+  +A+ +  +M   G SPD+++Y+++I G  + G+  EA  L   +  KG +PN    
Sbjct: 475 GLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPN---- 530

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
                                           + Y+SI   L +EGR+    ++ + + +
Sbjct: 531 -------------------------------TIIYSSIACALSREGRVNKVIQMFDNIKD 559

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
             I  D V  N +I++ CK  +T  A+     M+  G M ++ TY  LI G         
Sbjct: 560 TTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKE 619

Query: 427 AKELLFGMLDAG 438
           A+ELL  +   G
Sbjct: 620 AQELLSELCSRG 631



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 83/178 (46%), Gaps = 2/178 (1%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N    + L+ F     + +  +++  QM V+   P L + + +++ L K   T+   ++ 
Sbjct: 460 NPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELL 519

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
             MV  G+  N  +Y+ +  A  +   V+KV ++   ++   +R+D   YN +I+  CK+
Sbjct: 520 NVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKR 579

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHV 304
                A+     M   G  P+  TY  LI G   EG  +EA+ L  ++  +GA   H+
Sbjct: 580 WETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGALRKHL 637


>gi|15236834|ref|NP_194398.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|334186944|ref|NP_001190849.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213515|sp|Q9SZ10.1|PP338_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g26680, mitochondrial; Flags: Precursor
 gi|4455191|emb|CAB36514.1| putative protein [Arabidopsis thaliana]
 gi|7269520|emb|CAB79523.1| putative protein [Arabidopsis thaliana]
 gi|332659836|gb|AEE85236.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332659837|gb|AEE85237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 521

 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 137/507 (27%), Positives = 232/507 (45%), Gaps = 44/507 (8%)

Query: 10  DTKFIKTISAIMLKGHWAKLLNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAES 69
           D  F+    + +++  W KL    ++  L S  +  VLL +        LS  FF WA++
Sbjct: 53  DLDFVNVAHSHLIQSDWDKL--NKLSDHLDSFRVKNVLLKIQKDY---LLSLEFFNWAKT 107

Query: 70  AVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS-VLNALVKIHDDPDG 128
             P   HSL++H  ++H LTKN+ FKSA+++L  + +   +  P+ V +AL+  + + D 
Sbjct: 108 RNPG-SHSLETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFDALLYSYRECDS 166

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
              V   L   +A+LK  ++    F QM+ +  +P + +C   ++SL      D+  + Y
Sbjct: 167 TPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFY 226

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
           ++M +                 CK                  +  + +T N +++ YC+ 
Sbjct: 227 REMRR-----------------CK------------------ISPNPYTLNMVMSGYCRS 251

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRL--FRDIKGATPNHVTY 306
           G   + + +   MER G     V+YN+LI G C +G +  A +L       G  PN VT+
Sbjct: 252 GKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTF 311

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
            TLI G+CRA  L+EA ++   M A  V P  VTYN+++    ++G    A R   +M  
Sbjct: 312 NTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVC 371

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
             I  D +T N LI   CK   T  A +    + +  L+ +  T+ ALI G C  K  D 
Sbjct: 372 NGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADR 431

Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
             EL   M+ +G  P+  +++ LV  +C   + +   ++L E V R + +D      +  
Sbjct: 432 GFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCN 491

Query: 487 RFCKKEKVDYAQRLFNLMQGNGILGDS 513
               + K    ++L   M+G   L +S
Sbjct: 492 GLKHQGKDQLVKKLLQEMEGKKFLQES 518



 Score = 46.6 bits (109), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 43/204 (21%), Positives = 87/204 (42%), Gaps = 4/204 (1%)

Query: 377 NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD 436
           ++L   +  +    +A     +M + G +    +  A +        +DIA      M  
Sbjct: 172 DSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRR 231

Query: 437 AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGL-CVDVSVYRALIRRFCKKEKVD 495
              SP+  + + ++ GYC     +  ++LL +    G    DVS Y  LI   C+K  + 
Sbjct: 232 CKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVS-YNTLIAGHCEKGLLS 290

Query: 496 YAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFS 555
            A +L N+M  +G+  + V + +L + + RA + +  S +  +M    +      Y +  
Sbjct: 291 SALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLI 350

Query: 556 ASYAK--DNEILDLFWSHVVDRGL 577
             Y++  D+E+   F+  +V  G+
Sbjct: 351 NGYSQQGDHEMAFRFYEDMVCNGI 374


>gi|357151708|ref|XP_003575878.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Brachypodium distachyon]
          Length = 676

 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 113/380 (29%), Positives = 196/380 (51%), Gaps = 5/380 (1%)

Query: 168 CTVLLNSLA-KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEM 226
           CTV++     K R  D V +++++M+++G   N+  Y   I   CK + V +   +L EM
Sbjct: 223 CTVIVRVFCQKGRFRD-VSELFRRMLEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEM 281

Query: 227 EFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRM-EREGISPDIVTYNSLIHGFCREGR 285
             K ++ +++T+ +LI   CK G    A  +  ++ +     P++ TY  +I G+C+EG+
Sbjct: 282 VAKGLKPNVYTHTSLINGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGK 341

Query: 286 MREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNS 343
           +  A  L   +  +G  PN  TYTTLI G+C+      A  L   M  +G  P + TYN+
Sbjct: 342 LARAEMLLGRMVEQGLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNA 401

Query: 344 ILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAG 403
           ++  LCK+G+I++A ++L   N + +  D VT   +I  +CK G    A+ + NRM E G
Sbjct: 402 LIDGLCKKGKIQEAYKVLRMANNQGLQLDKVTYTVMITEHCKQGHITYALDLFNRMAENG 461

Query: 404 LMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALL 463
              D  TY  LI  +C+ ++M+ +++L    L     P+  +Y+ ++ GYC      + L
Sbjct: 462 CHPDIHTYTTLIARYCQQRQMEESQKLFDKCLAIELVPTKQTYTSMIAGYCKVGKSTSAL 521

Query: 464 KLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAY 523
           ++ +  V  G   D   Y ALI   CK+ +++ A+ L+  M    ++   V   +LA+ Y
Sbjct: 522 RVFERMVQNGCQADSITYGALISGLCKESRLEEARALYEGMLDKRLVPCEVTPVTLAFEY 581

Query: 524 WRAGEPKACSDILDDMYRRR 543
            R  +      ILD + +RR
Sbjct: 582 CRREKAVVAVSILDRLDKRR 601



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 101/364 (27%), Positives = 174/364 (47%), Gaps = 38/364 (10%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGV---------- 196
           +D  ++F +M      P++   T  ++ L K       + V ++MV  G+          
Sbjct: 237 RDVSELFRRMLEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNVYTHTSL 296

Query: 197 --------------------------VANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKD 230
                                       N+H Y V+I   CK   + + E LL  M  + 
Sbjct: 297 INGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQG 356

Query: 231 VRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREAR 290
           +  +  TY TLI+ +CK+G    A  + ++M REG  P+I TYN+LI G C++G+++EA 
Sbjct: 357 LAPNTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNALIDGLCKKGKIQEAY 416

Query: 291 RLFR--DIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
           ++ R  + +G   + VTYT +I  +C+   +  AL L   MA  G +P + TY +++ + 
Sbjct: 417 KVLRMANNQGLQLDKVTYTVMITEHCKQGHITYALDLFNRMAENGCHPDIHTYTTLIARY 476

Query: 349 CKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ 408
           C++ ++ ++ +L ++    ++ P   T  ++I  YCK+G + SA++V  RM++ G   D 
Sbjct: 477 CQQRQMEESQKLFDKCLAIELVPTKQTYTSMIAGYCKVGKSTSALRVFERMVQNGCQADS 536

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
            TY ALI G CK   ++ A+ L  GMLD    P   +   L   YC +      + +LD 
Sbjct: 537 ITYGALISGLCKESRLEEARALYEGMLDKRLVPCEVTPVTLAFEYCRREKAVVAVSILDR 596

Query: 469 FVSR 472
              R
Sbjct: 597 LDKR 600



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 99/358 (27%), Positives = 182/358 (50%), Gaps = 4/358 (1%)

Query: 186 KVYKKMV-QLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIAL 244
           KV+  MV + G++ +   +  LI  CC+   +++V+ LL  M+ +    D  T   ++ +
Sbjct: 170 KVFDGMVTRGGLLPDARSFRALIVGCCRDGRMEEVDALLTVMQGQGFCLDNATCTVIVRV 229

Query: 245 YCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPN 302
           +C+KG   +   +  RM   G  P++V Y + I G C+   +++A  +  ++  KG  PN
Sbjct: 230 FCQKGRFRDVSELFRRMLEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPN 289

Query: 303 HVTYTTLIDGYCRANDLEEALRL-REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLL 361
             T+T+LI+G C+    E A RL  +++ +    P V TY  ++   CKEG++  A  LL
Sbjct: 290 VYTHTSLINGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLL 349

Query: 362 NEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKA 421
             M E+ +AP+  T  TLI+ +CK G    A ++ N+M   G   + +TY ALI G CK 
Sbjct: 350 GRMVEQGLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNALIDGLCKK 409

Query: 422 KEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVY 481
            ++  A ++L    + G      +Y+ ++  +C + +    L L +     G   D+  Y
Sbjct: 410 GKIQEAYKVLRMANNQGLQLDKVTYTVMITEHCKQGHITYALDLFNRMAENGCHPDIHTY 469

Query: 482 RALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
             LI R+C++ +++ +Q+LF+      ++     YTS+   Y + G+  +   + + M
Sbjct: 470 TTLIARYCQQRQMEESQKLFDKCLAIELVPTKQTYTSMIAGYCKVGKSTSALRVFERM 527



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 93/345 (26%), Positives = 158/345 (45%), Gaps = 6/345 (1%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N H  + ++  Y           +  +M    L P+ +  T L++   K+   +  +++ 
Sbjct: 325 NVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLISGHCKEGSFNCAFELM 384

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
            KM + G   NI+ YN LI   CK   + +  K+L     + ++ D  TY  +I  +CK+
Sbjct: 385 NKMRREGFQPNIYTYNALIDGLCKKGKIQEAYKVLRMANNQGLQLDKVTYTVMITEHCKQ 444

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGA--TPNHVTY 306
           G    AL + +RM   G  PDI TY +LI  +C++ +M E+++LF         P   TY
Sbjct: 445 GHITYALDLFNRMAENGCHPDIHTYTTLIARYCQQRQMEESQKLFDKCLAIELVPTKQTY 504

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
           T++I GYC+      ALR+ E M   G     +TY +++  LCKE R+ +A  L   M +
Sbjct: 505 TSMIAGYCKVGKSTSALRVFERMVQNGCQADSITYGALISGLCKESRLEEARALYEGMLD 564

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
           K++ P  VT  TL   YC+      A+ + +R+ +        T   L+        ++ 
Sbjct: 565 KRLVPCEVTPVTLAFEYCRREKAVVAVSILDRLDK---RRKNHTVNVLVRKLSAIGHVED 621

Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
           A   L   LD   +    +Y+  ++  C  N + AL   + E +S
Sbjct: 622 ASLFLKKALDVDLAVDRLAYTSFINS-CYANKKYALATEISEKIS 665



 Score = 58.5 bits (140), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 57/250 (22%), Positives = 100/250 (40%), Gaps = 37/250 (14%)

Query: 350 KEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML-EAGLMLDQ 408
           + GR+ +A  ++ EM    +     T N ++ A    G  A A KV + M+   GL+ D 
Sbjct: 126 EAGRLPEAADMVFEMRSHGLPFCVETANWVLRAGLDTGSFAYARKVFDGMVTRGGLLPDA 185

Query: 409 FTYKALIHG-----------------------------------FCKAKEMDIAKELLFG 433
            +++ALI G                                   FC+        EL   
Sbjct: 186 RSFRALIVGCCRDGRMEEVDALLTVMQGQGFCLDNATCTVIVRVFCQKGRFRDVSELFRR 245

Query: 434 MLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEK 493
           ML+ G  P+  +Y+  +DG C +   +    +L+E V++GL  +V  + +LI   CK   
Sbjct: 246 MLEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNVYTHTSLINGLCKIGW 305

Query: 494 VDYAQRLF-NLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYR 552
            + A RLF  L++ +    +   YT +   Y + G+      +L  M  + L      Y 
Sbjct: 306 TERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYT 365

Query: 553 SFSASYAKDN 562
           +  + + K+ 
Sbjct: 366 TLISGHCKEG 375



 Score = 45.8 bits (107), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 29/129 (22%), Positives = 58/129 (44%), Gaps = 1/129 (0%)

Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
           + ++  F +A  +  A +++F M   G      + +W++    +  +     K+ D  V+
Sbjct: 118 RRMVAAFAEAGRLPEAADMVFEMRSHGLPFCVETANWVLRAGLDTGSFAYARKVFDGMVT 177

Query: 472 R-GLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPK 530
           R GL  D   +RALI   C+  +++    L  +MQG G   D+   T +   + + G  +
Sbjct: 178 RGGLLPDARSFRALIVGCCRDGRMEEVDALLTVMQGQGFCLDNATCTVIVRVFCQKGRFR 237

Query: 531 ACSDILDDM 539
             S++   M
Sbjct: 238 DVSELFRRM 246


>gi|413916119|gb|AFW56051.1| hypothetical protein ZEAMMB73_517553 [Zea mays]
          Length = 663

 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 146/557 (26%), Positives = 231/557 (41%), Gaps = 88/557 (15%)

Query: 56  IPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSV 115
           +P L+   F+WAE+    +  S  +   ++  L +  H + A  +  +      L     
Sbjct: 78  LPGLAHQLFRWAETTPCGFPRSASAFAAVLVPLARANHIRVAYPVSLRALHLGLLLPLVS 137

Query: 116 LNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDG---------LQVFDQMRVHNLMPHLH 166
           L     +   P    ++L  L   Y+     +D          L  F +M  H + P + 
Sbjct: 138 LLLSGPLAPAPLSLLNLLLSLSTKYSKECKARDATPDTCSTLCLSAFREMASHGVAPDVK 197

Query: 167 ACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEM 226
            C  +L  L      D +  V+ +M+QLG+  +I  YN L+ +  K    DK++ LL EM
Sbjct: 198 DCNKVLRVLRDAARWDDMSAVHAEMLQLGIEPSIVTYNTLLDSFSKEGRKDKIDMLLKEM 257

Query: 227 EFK-------DV-----------------------------RADLFTYNTLIALYCKKGM 250
           E +       DV                             +A  FTYN LI     +G 
Sbjct: 258 EARGSSCLPNDVTYNVVIAGLARKGYLEEAAELVEEMRLSKKASSFTYNPLITGLLARGF 317

Query: 251 HYEALAVQDRMEREGISP-----------------------------------DIVTYNS 275
             +   +Q  ME EGI P                                   D++TYNS
Sbjct: 318 VKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQSGQIEAAQAKFVEMRAMGLLPDVITYNS 377

Query: 276 LIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKG 333
           L++G+C+ G  +EA  LF D++  G  P  +TY  LIDGYCR  DLEEA RL+E M  +G
Sbjct: 378 LLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQG 437

Query: 334 VYPGVVTYNSILR---KLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTA 390
             P V TY  +++    +C     R+     +EM  K + PD    NT I A   +GD +
Sbjct: 438 CLPDVYTYTILMKGSHNVCSLAMTRE---FFDEMLSKGLRPDCFAYNTRICAEITLGDIS 494

Query: 391 SAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLV 450
            + +++  ++  G+  D  TY  LI G CK   +  A+EL+  M+  G  P   +Y+ L+
Sbjct: 495 KSFQLREVIMLEGISSDTVTYNILIDGLCKTGNLKDAEELMMQMISNGLQPDCITYTCLI 554

Query: 451 DGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGIL 510
             +C +       K  ++ +S GL      Y  +I  +C++  +  A   F  M   G+ 
Sbjct: 555 HAHCERGFLREARKFFNDMISDGLPPSAVTYTVIIHAYCRRGNLYSAYGWFRKMLEEGVE 614

Query: 511 GDSVIYTSLAYAYWRAG 527
            + + Y  L +A  R G
Sbjct: 615 PNEITYNVLIHALCRMG 631



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 99/333 (29%), Positives = 157/333 (47%), Gaps = 37/333 (11%)

Query: 190 KMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKG 249
           +M   G++  +  YN +IH   +S  ++  +    EM    +  D+ TYN+L+  YCK G
Sbjct: 327 EMENEGIMPTVVTYNAMIHGLLQSGQIEAAQAKFVEMRAMGLLPDVITYNSLLNGYCKAG 386

Query: 250 MHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYT 307
              EAL +   + R G++P ++TYN LI G+CR G + EARRL  ++  +G  P+  TYT
Sbjct: 387 NQKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVYTYT 446

Query: 308 TLIDGY------------------------CRA-----------NDLEEALRLREVMAAK 332
            L+ G                         C A            D+ ++ +LREV+  +
Sbjct: 447 ILMKGSHNVCSLAMTREFFDEMLSKGLRPDCFAYNTRICAEITLGDISKSFQLREVIMLE 506

Query: 333 GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
           G+    VTYN ++  LCK G ++DA  L+ +M    + PD +T   LI+A+C+ G    A
Sbjct: 507 GISSDTVTYNILIDGLCKTGNLKDAEELMMQMISNGLQPDCITYTCLIHAHCERGFLREA 566

Query: 393 MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
            K  N M+  GL     TY  +IH +C+   +  A      ML+ G  P+  +Y+ L+  
Sbjct: 567 RKFFNDMISDGLPPSAVTYTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHA 626

Query: 453 YCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
            C     +   +   E + RGL  +   Y  LI
Sbjct: 627 LCRMGRTQLAYRHFYEMLERGLVPNKYTYTLLI 659



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 92/310 (29%), Positives = 155/310 (50%), Gaps = 18/310 (5%)

Query: 153 FDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCK 212
           F +MR   L+P +     LLN   K         ++  + + G+   +  YN+LI   C+
Sbjct: 360 FVEMRAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNILIDGYCR 419

Query: 213 SSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYE-ALAVQ----DRMEREGIS 267
             D+++  +L  EM  +    D++TY  L+     KG H   +LA+     D M  +G+ 
Sbjct: 420 LGDLEEARRLKEEMVEQGCLPDVYTYTILM-----KGSHNVCSLAMTREFFDEMLSKGLR 474

Query: 268 PDIVTYNSLIHGFCREGRMREARRLF--RDI---KGATPNHVTYTTLIDGYCRANDLEEA 322
           PD   YN+ I   C E  + +  + F  R++   +G + + VTY  LIDG C+  +L++A
Sbjct: 475 PDCFAYNTRI---CAEITLGDISKSFQLREVIMLEGISSDTVTYNILIDGLCKTGNLKDA 531

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
             L   M + G+ P  +TY  ++   C+ G +R+A +  N+M    + P  VT   +I+A
Sbjct: 532 EELMMQMISNGLQPDCITYTCLIHAHCERGFLREARKFFNDMISDGLPPSAVTYTVIIHA 591

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           YC+ G+  SA     +MLE G+  ++ TY  LIH  C+     +A    + ML+ G  P+
Sbjct: 592 YCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLAYRHFYEMLERGLVPN 651

Query: 443 YCSYSWLVDG 452
             +Y+ L+DG
Sbjct: 652 KYTYTLLIDG 661



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 96/347 (27%), Positives = 164/347 (47%), Gaps = 27/347 (7%)

Query: 77  SLQSHWTMIHILTKNKHFKSAQ----NMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHV 132
           ++ ++  MIH L ++   ++AQ     M     L D ++  S+LN   K      GN   
Sbjct: 336 TVVTYNAMIHGLLQSGQIEAAQAKFVEMRAMGLLPDVITYNSLLNGYCKA-----GNQ-- 388

Query: 133 LSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMV 192
                         ++ L +F  +R   L P +    +L++   +    +   ++ ++MV
Sbjct: 389 --------------KEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMV 434

Query: 193 QLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHY 252
           + G + +++ Y +L+        +    +   EM  K +R D F YNT I      G   
Sbjct: 435 EQGCLPDVYTYTILMKGSHNVCSLAMTREFFDEMLSKGLRPDCFAYNTRICAEITLGDIS 494

Query: 253 EALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLI 310
           ++  +++ +  EGIS D VTYN LI G C+ G +++A  L   +   G  P+ +TYT LI
Sbjct: 495 KSFQLREVIMLEGISSDTVTYNILIDGLCKTGNLKDAEELMMQMISNGLQPDCITYTCLI 554

Query: 311 DGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIA 370
             +C    L EA +    M + G+ P  VTY  I+   C+ G +  A     +M E+ + 
Sbjct: 555 HAHCERGFLREARKFFNDMISDGLPPSAVTYTVIIHAYCRRGNLYSAYGWFRKMLEEGVE 614

Query: 371 PDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHG 417
           P+ +T N LI+A C++G T  A +    MLE GL+ +++TY  LI G
Sbjct: 615 PNEITYNVLIHALCRMGRTQLAYRHFYEMLERGLVPNKYTYTLLIDG 661


>gi|242069921|ref|XP_002450237.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
 gi|241936080|gb|EES09225.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
          Length = 757

 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 123/449 (27%), Positives = 213/449 (47%), Gaps = 9/449 (2%)

Query: 126 PDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVH---NLMPHLHACTVLLNSLAKDRLTD 182
           PD  S+  S L+  + N K  ++ L++   M      +  P++   T +++ L K ++ D
Sbjct: 162 PDVFSY--SILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTTVIDGLCKAQMVD 219

Query: 183 MVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLI 242
               V++ M+  GV  N H Y  LIH         +V ++L EM    ++ D + Y  L+
Sbjct: 220 RAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPDCYIYAVLL 279

Query: 243 ALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI---KGA 299
              CK G   EA  + D + R+GI P++  Y  L+HG+  EG + E    F D+    G 
Sbjct: 280 DYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHS-FLDLMVGNGV 338

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
           +P+H  +  +   Y +   ++EA+ + + M  + + P +VTY +++  LCK GR+ DA  
Sbjct: 339 SPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVL 398

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
             N+M ++ + PD    ++L+   C +     A ++   +L+ G+ LD   +  L+   C
Sbjct: 399 KFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLC 458

Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
           +   +  A+ L+  ML  G  P   SY+ LVDG+C     +   KLLD  VS GL  D  
Sbjct: 459 REGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKV 518

Query: 480 VYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
            Y  L+  +CK  ++D A  LF  M   G+  D V Y ++ +  ++ G      ++   M
Sbjct: 519 TYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSM 578

Query: 540 YRRRLMITLKIYRSFSASYAKDNEILDLF 568
              R  + +  Y        K+N + + F
Sbjct: 579 INSRTQMNIYTYNIIINGLCKNNFVDEAF 607



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 116/452 (25%), Positives = 222/452 (49%), Gaps = 4/452 (0%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N+H  + L+  Y ++   ++ +Q+  +M  H L P  +   VLL+ L K+        ++
Sbjct: 236 NNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPDCYIYAVLLDYLCKNGRCTEARNIF 295

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
             +++ G+  N+ +Y +L+H       + ++   L  M    V  D   +N +   Y KK
Sbjct: 296 DSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKK 355

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTY 306
            M  EA+ + D+M ++ +SP+IVTY +LI   C+ GR+ +A   F  +  +G TP+   +
Sbjct: 356 AMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVF 415

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
           ++L+ G C  +  E+A  L   +  +G+    V +N+++  LC+EGR+ +A RL++ M  
Sbjct: 416 SSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLR 475

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
             + PD ++ NTL++ +C  G    A K+ + ++  GL  D+ TY  L+HG+CKA+ +D 
Sbjct: 476 VGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDD 535

Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
           A  L   ML  G +P   +Y+ ++ G           +L    ++    +++  Y  +I 
Sbjct: 536 AYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIIN 595

Query: 487 RFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMI 546
             CK   VD A ++F+ +    +  D      +  A  + G  +   D+   +    L+ 
Sbjct: 596 GLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGGRKEDAMDLFATISAYGLVP 655

Query: 547 TLKIYRSFSASYAKDN--EILDLFWSHVVDRG 576
            ++ Y   + +  K+   E LD  +S + + G
Sbjct: 656 DVETYCLIAENLIKEGSLEELDELFSAMEENG 687



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 126/431 (29%), Positives = 208/431 (48%), Gaps = 9/431 (2%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           S L+ +V     PD   H+ + +   YA   M  + + +FD+MR   L P++     L++
Sbjct: 328 SFLDLMVGNGVSPD--HHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALID 385

Query: 174 SLAK-DRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVR 232
           +L K  R+ D V K + +M+  G+  +I +++ L++  C     +K E+L  E+  + +R
Sbjct: 386 ALCKLGRVDDAVLK-FNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIR 444

Query: 233 ADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRL 292
            D   +NTL+   C++G   EA  + D M R G+ PD+++YN+L+ G C  GR+ EA +L
Sbjct: 445 LDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKL 504

Query: 293 FRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
              I   G  P+ VTY TL+ GYC+A  +++A  L   M  KG+ P VVTYN+IL  L +
Sbjct: 505 LDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQ 564

Query: 351 EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
            GR  +A  L   M   +   +  T N +IN  CK      A K+ + +    L LD FT
Sbjct: 565 TGRFSEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFT 624

Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFV 470
              +I    K    + A +L   +   G  P   +Y  + +    + + E L +L     
Sbjct: 625 ANIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELDELFSAME 684

Query: 471 SRGLCVDVSVYRALIRRFCKKEKVDYAQR-LFNLMQGNGILGDSVIYTSLAYAYWRAGEP 529
             G   +  +  AL+R    +  ++ A   L  L + N  L  S   TS+  + +  GE 
Sbjct: 685 ENGTAPNSRMLNALVRWLLHRGDINRAGAYLSKLDEKNFSLEAST--TSMLISIYSRGEY 742

Query: 530 KACSDILDDMY 540
           +  +  L + Y
Sbjct: 743 QQLAKSLPEKY 753



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 106/417 (25%), Positives = 169/417 (40%), Gaps = 71/417 (17%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D L++FD+M  H     + A   LL ++++ R +     V            + L+N +I
Sbjct: 34  DALKLFDEMLTHARPASVRAFNQLLTAVSRARCSSASELV------------VSLFNRMI 81

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALA----------- 256
             C                    V    FTY  LI  +C+ G      A           
Sbjct: 82  RECSIK-----------------VAPSSFTYTILIGCFCRMGRLKHGFAAFGLILKTGWR 124

Query: 257 VQD--------------------------RMEREGISPDIVTYNSLIHGFCREGRMREAR 290
           V D                          RM   G +PD+ +Y+ L+ GFC E R  EA 
Sbjct: 125 VNDTVIFSQLLKGLCDAKRVDEATDILLRRMPEFGCTPDVFSYSILLKGFCNEKRAEEAL 184

Query: 291 RLFR----DIKGA-TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSIL 345
            L      D  G+ TPN VTYTT+IDG C+A  ++ A  + + M  KGV P   TY  ++
Sbjct: 185 ELLSMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLI 244

Query: 346 RKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLM 405
                 G+ ++  ++L EM+   + PD      L++  CK G    A  + + ++  G+ 
Sbjct: 245 HGYLSIGKWKEVVQMLQEMSTHGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIK 304

Query: 406 LDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKL 465
            +   Y  L+HG+     +      L  M+  G SP +  ++ +   Y  K   +  + +
Sbjct: 305 PNVTIYGILLHGYATEGSLSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHI 364

Query: 466 LDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYA 522
            D+   + L  ++  Y ALI   CK  +VD A   FN M   G+  D  +++SL Y 
Sbjct: 365 FDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYG 421



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 91/338 (26%), Positives = 150/338 (44%), Gaps = 15/338 (4%)

Query: 259 DRMERE---GISPDIVTYNSLIHGFCREGRMREARRLFRDIKGA---TPNHVTYTTLIDG 312
           +RM RE    ++P   TY  LI  FCR GR++     F  I        + V ++ L+ G
Sbjct: 78  NRMIRECSIKVAPSSFTYTILIGCFCRMGRLKHGFAAFGLILKTGWRVNDTVIFSQLLKG 137

Query: 313 YCRANDLEEA--LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM---NEK 367
            C A  ++EA  + LR  M   G  P V +Y+ +L+  C E R  +A  LL+ M    + 
Sbjct: 138 LCDAKRVDEATDILLRR-MPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDG 196

Query: 368 KIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIA 427
              P+ VT  T+I+  CK      A  V   M++ G+  +  TY  LIHG+    +    
Sbjct: 197 SHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEV 256

Query: 428 KELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRR 487
            ++L  M   G  P    Y+ L+D  C          + D  + +G+  +V++Y  L+  
Sbjct: 257 VQMLQEMSTHGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHG 316

Query: 488 FCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMIT 547
           +  +  +       +LM GNG+  D  I+  +  AY +         I D M ++RL   
Sbjct: 317 YATEGSLSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPN 376

Query: 548 LKIYRSFSASYAKDNEILD--LFWSHVVDRGLMSKHIF 583
           +  Y +   +  K   + D  L ++ ++D G M+  IF
Sbjct: 377 IVTYGALIDALCKLGRVDDAVLKFNQMIDEG-MTPDIF 413



 Score = 47.4 bits (111), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 46/198 (23%), Positives = 79/198 (39%), Gaps = 43/198 (21%)

Query: 319 LEEALRLREVMAAKGVYPGVVTYNSIL----RKLCKEGR---IRDANRLLNEMNEKKIAP 371
           L +AL+L + M        V  +N +L    R  C       +   NR++ E +  K+AP
Sbjct: 32  LNDALKLFDEMLTHARPASVRAFNQLLTAVSRARCSSASELVVSLFNRMIRECS-IKVAP 90

Query: 372 DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLML-DQFTYKALIHGFCKAKEMDIAKEL 430
            + T   LI  +C++G           +L+ G  + D   +  L+ G C AK +D A ++
Sbjct: 91  SSFTYTILIGCFCRMGRLKHGFAAFGLILKTGWRVNDTVIFSQLLKGLCDAKRVDEATDI 150

Query: 431 LFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCK 490
           L                               L+ + EF   G   DV  Y  L++ FC 
Sbjct: 151 L-------------------------------LRRMPEF---GCTPDVFSYSILLKGFCN 176

Query: 491 KEKVDYAQRLFNLMQGNG 508
           +++ + A  L ++M  +G
Sbjct: 177 EKRAEEALELLSMMADDG 194


>gi|242038895|ref|XP_002466842.1| hypothetical protein SORBIDRAFT_01g015050 [Sorghum bicolor]
 gi|241920696|gb|EER93840.1| hypothetical protein SORBIDRAFT_01g015050 [Sorghum bicolor]
          Length = 1090

 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 132/495 (26%), Positives = 235/495 (47%), Gaps = 40/495 (8%)

Query: 85  IHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVI--FYAN 142
           + IL + +    A ++L+ +A+  F S  ++  +L++I    D  +HV+  L+I  +   
Sbjct: 40  VRILIQAQMHSQAMSVLKHLAVTGF-SCTAIFTSLLRIISRFDSTNHVVFELLIKAYVKE 98

Query: 143 LKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHL 202
            K+    + VF  M          AC  +L +L ++  +  VW   ++ +      ++  
Sbjct: 99  RKVLDAAVAVF-FMDDCGFKASPVACNSILKALVEEGESKYVWLFLRESLARKFPLDVTT 157

Query: 203 YNVLIHACCKSSDVDKVEKLL-------------------------------C---EMEF 228
            N+L+++ C + +  K E +L                               C   +ME 
Sbjct: 158 CNILLNSLCTNGEFRKAEDMLQKMKSCCLSNSATYNTILHWYVKKGRFKAALCVLEDMER 217

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
             ++AD++TYN +I   C+      A  +  RM ++ ++PD  TYN+LI+GF  EG++  
Sbjct: 218 DSIQADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLTPDECTYNTLINGFFGEGKINH 277

Query: 289 ARRLFRDIKGAT--PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILR 346
           AR +F  +   T  P+  TYTT+IDGYCR   +++AL +   M   GV P  +TY+++L 
Sbjct: 278 ARCVFNHMLRQTLVPSVATYTTMIDGYCRNRRIDKALSVLSEMEITGVMPSELTYSALLN 337

Query: 347 KLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLML 406
             CK   +  A  L+ ++  + I  +   C  LI+ +C++G+ + A ++   MLE G+  
Sbjct: 338 GYCKVSMLGPALDLMVDLKSRGITINKTMCTILIDGFCQVGEISKAKQILKSMLEDGIDP 397

Query: 407 DQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLL 466
           D  TY ALI+G C+  +M   KE+L  M  +G  P+   Y+ L+  YC     +  LK  
Sbjct: 398 DVVTYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKVALKHF 457

Query: 467 DEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRA 526
            +   RGL  +  ++ AL+R F ++  +  A+     M    I  +SV +  +  +Y   
Sbjct: 458 VDIYRRGLVANPVIHNALLRAFYREGMITEAEHFRQYMSRMNISFNSVSFNCIIDSYCHR 517

Query: 527 GEPKACSDILDDMYR 541
           G+      + DDM R
Sbjct: 518 GKIVEAFSVYDDMVR 532



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 107/390 (27%), Positives = 195/390 (50%), Gaps = 2/390 (0%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           VF+ M    L+P +   T +++   ++R  D    V  +M   GV+ +   Y+ L++  C
Sbjct: 281 VFNHMLRQTLVPSVATYTTMIDGYCRNRRIDKALSVLSEMEITGVMPSELTYSALLNGYC 340

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           K S +     L+ +++ + +  +      LI  +C+ G   +A  +   M  +GI PD+V
Sbjct: 341 KVSMLGPALDLMVDLKSRGITINKTMCTILIDGFCQVGEISKAKQILKSMLEDGIDPDVV 400

Query: 272 TYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           TY++LI+G CR  +M E + +   ++  G  PN V YTTLI  YC+A  ++ AL+    +
Sbjct: 401 TYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKVALKHFVDI 460

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
             +G+    V +N++LR   +EG I +A      M+   I+ ++V+ N +I++YC  G  
Sbjct: 461 YRRGLVANPVIHNALLRAFYREGMITEAEHFRQYMSRMNISFNSVSFNCIIDSYCHRGKI 520

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
             A  V + M+  G   +  TY+ L+ G C+   +  AK+ +F +LD   +    +++ L
Sbjct: 521 VEAFSVYDDMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCLLDIPSAVDEKTFNAL 580

Query: 450 VDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGI 509
           + G C     +  L + ++ V      D+  Y  L+  FC+K K+  A  +  +M   G+
Sbjct: 581 LLGICKYGTLDEALDICEKMVKNNCLPDIHTYTILLSGFCRKGKILPALVMLQMMLEKGV 640

Query: 510 LGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
           + D+V YT L       G+ KA S +  ++
Sbjct: 641 VPDTVAYTCLLNGLINEGQVKAASYVFQEI 670



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 106/414 (25%), Positives = 192/414 (46%), Gaps = 7/414 (1%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
            +L ++++   DPD  ++  S L+     +    +  ++  +M+   ++P+    T L+ 
Sbjct: 385 QILKSMLEDGIDPDVVTY--SALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLIC 442

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
              K     +  K +  + + G+VAN  ++N L+ A  +   + + E     M   ++  
Sbjct: 443 YYCKAGYVKVALKHFVDIYRRGLVANPVIHNALLRAFYREGMITEAEHFRQYMSRMNISF 502

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRL- 292
           +  ++N +I  YC +G   EA +V D M R G SP++ TY +L+ G C+ G + +A++  
Sbjct: 503 NSVSFNCIIDSYCHRGKIVEAFSVYDDMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFM 562

Query: 293 --FRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
               DI  A  +  T+  L+ G C+   L+EAL + E M      P + TY  +L   C+
Sbjct: 563 FCLLDIPSAV-DEKTFNALLLGICKYGTLDEALDICEKMVKNNCLPDIHTYTILLSGFCR 621

Query: 351 EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML-EAGLMLDQF 409
           +G+I  A  +L  M EK + PD V    L+N     G   +A  V   ++ + GL  D  
Sbjct: 622 KGKILPALVMLQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCI 681

Query: 410 TYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEF 469
            Y +L++G+ K   ++  K ++  M      P+  SY+ L+ GY  +      L L    
Sbjct: 682 AYNSLMNGYLKGGNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYM 741

Query: 470 VSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAY 523
           V +G+  D   YR LI    +   +D A +    M   GI  D +++  L  ++
Sbjct: 742 VRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDKLVFDILITSF 795



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 109/441 (24%), Positives = 202/441 (45%), Gaps = 3/441 (0%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           NS   + ++  Y +     +   V+D M  +   P++     LL  L +        +  
Sbjct: 503 NSVSFNCIIDSYCHRGKIVEAFSVYDDMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFM 562

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
             ++ +    +   +N L+   CK   +D+   +  +M   +   D+ TY  L++ +C+K
Sbjct: 563 FCLLDIPSAVDEKTFNALLLGICKYGTLDEALDICEKMVKNNCLPDIHTYTILLSGFCRK 622

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI---KGATPNHVT 305
           G    AL +   M  +G+ PD V Y  L++G   EG+++ A  +F++I   +G   + + 
Sbjct: 623 GKILPALVMLQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIA 682

Query: 306 YTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMN 365
           Y +L++GY +  ++    R+   M    VYP   +YN ++    K G+   +  L   M 
Sbjct: 683 YNSLMNGYLKGGNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMV 742

Query: 366 EKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMD 425
            K I PDNVT   LI    + G    A+K   +M+  G+  D+  +  LI  F +  +M 
Sbjct: 743 RKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDKLVFDILITSFSEKSKMH 802

Query: 426 IAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
            A  L   M     SPS  ++S +++G   KN  +   ++L E +  GL  + + Y AL+
Sbjct: 803 NALRLFNCMKCLHLSPSSKTFSAMINGLIRKNYLDQSHEVLHEMLQVGLQPNHTHYIALV 862

Query: 486 RRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
              C+  ++D A RL   M+  GI+   V  +S+     R G+ +    +  +M R  ++
Sbjct: 863 NAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSNMMRSGMV 922

Query: 546 ITLKIYRSFSASYAKDNEILD 566
            T+  + +   S  K+++I D
Sbjct: 923 PTVATFTTLMHSLCKESKIAD 943



 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 102/406 (25%), Positives = 200/406 (49%), Gaps = 7/406 (1%)

Query: 149  GLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMV-QLGVVANIHLYNVLI 207
             L +   M    ++P   A T LLN L  +        V+++++ + G+ A+   YN L+
Sbjct: 628  ALVMLQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAYNSLM 687

Query: 208  HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
            +   K  +V+ +++++ +M   +V  +  +YN L+  Y K+G   ++L +   M R+GI 
Sbjct: 688  NGYLKGGNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIR 747

Query: 268  PDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEALRL 325
            PD VTY  LI G    G +  A +      ++G  P+ + +  LI  +   + +  ALRL
Sbjct: 748  PDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDKLVFDILITSFSEKSKMHNALRL 807

Query: 326  REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
               M    + P   T+++++  L ++  +  ++ +L+EM +  + P++     L+NA C+
Sbjct: 808  FNCMKCLHLSPSSKTFSAMINGLIRKNYLDQSHEVLHEMLQVGLQPNHTHYIALVNAKCR 867

Query: 386  IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            +G+   A ++K  M   G++  +    ++I G C+  +++ A  +   M+ +G  P+  +
Sbjct: 868  VGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSNMMRSGMVPTVAT 927

Query: 446  YSWLVDGYCNKNN-EEAL-LKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNL 503
            ++ L+   C ++   +AL LK L E     L VDV  Y  LI   CK + +  A  L+  
Sbjct: 928  FTTLMHSLCKESKIADALHLKRLMELCR--LKVDVVSYNVLITGLCKDKHISDALDLYGE 985

Query: 504  MQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLK 549
            M+  G+  +   Y +L  A +  G  +   ++L+D+  R L+   K
Sbjct: 986  MKSKGLWPNVTTYITLTGAMYSTGRMQNGEELLEDIEERGLIPAFK 1031



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 81/314 (25%), Positives = 145/314 (46%), Gaps = 4/314 (1%)

Query: 134  SWLVIFYANLKMTQ--DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKM 191
            S+ ++ +  +K  Q    L ++  M    + P      +L+  L++  L D+  K  +KM
Sbjct: 717  SYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKM 776

Query: 192  VQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMH 251
            V  G+  +  ++++LI +  + S +    +L   M+   +     T++ +I    +K   
Sbjct: 777  VLEGIFPDKLVFDILITSFSEKSKMHNALRLFNCMKCLHLSPSSKTFSAMINGLIRKNYL 836

Query: 252  YEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTL 309
             ++  V   M + G+ P+   Y +L++  CR G +  A RL  ++K  G  P  V  +++
Sbjct: 837  DQSHEVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSI 896

Query: 310  IDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI 369
            I G CR   LEEA+ +   M   G+ P V T+ +++  LCKE +I DA  L   M   ++
Sbjct: 897  IRGLCRCGKLEEAVIVFSNMMRSGMVPTVATFTTLMHSLCKESKIADALHLKRLMELCRL 956

Query: 370  APDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKE 429
              D V+ N LI   CK    + A+ +   M   GL  +  TY  L         M   +E
Sbjct: 957  KVDVVSYNVLITGLCKDKHISDALDLYGEMKSKGLWPNVTTYITLTGAMYSTGRMQNGEE 1016

Query: 430  LLFGMLDAGFSPSY 443
            LL  + + G  P++
Sbjct: 1017 LLEDIEERGLIPAF 1030



 Score = 75.1 bits (183), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 61/268 (22%), Positives = 111/268 (41%), Gaps = 43/268 (16%)

Query: 132  VLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKM 191
            V   L+  ++      + L++F+ M+  +L P     + ++N L +    D   +V  +M
Sbjct: 787  VFDILITSFSEKSKMHNALRLFNCMKCLHLSPSSKTFSAMINGLIRKNYLDQSHEVLHEM 846

Query: 192  VQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMH 251
            +Q+G+  N   Y  L++A C+  ++D+  +L  EM+   +       +++I   C+ G  
Sbjct: 847  LQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKL 906

Query: 252  YEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR---------DI------ 296
             EA+ V   M R G+ P + T+ +L+H  C+E ++ +A  L R         D+      
Sbjct: 907  EEAVIVFSNMMRSGMVPTVATFTTLMHSLCKESKIADALHLKRLMELCRLKVDVVSYNVL 966

Query: 297  ----------------------KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGV 334
                                  KG  PN  TY TL         ++    L E +  +G+
Sbjct: 967  ITGLCKDKHISDALDLYGEMKSKGLWPNVTTYITLTGAMYSTGRMQNGEELLEDIEERGL 1026

Query: 335  YPGVVTYNSILRKLCKEGRIRDANRLLN 362
             P      ++      E R+ DA R LN
Sbjct: 1027 IPAFKQLENL------ERRMEDAIRRLN 1048


>gi|242047602|ref|XP_002461547.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
 gi|241924924|gb|EER98068.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
          Length = 696

 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 129/411 (31%), Positives = 196/411 (47%), Gaps = 9/411 (2%)

Query: 144 KMTQDGLQ-VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG--VVANI 200
           K T D +  V  +M      P + + T LL  L  ++  +   ++   M + G     N+
Sbjct: 193 KRTSDAMNIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNV 252

Query: 201 HLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDR 260
             Y  +IH   K  DV K   L C+M    +  ++ T N++I   CK     +A AV  +
Sbjct: 253 VSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQ 312

Query: 261 MEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRAND 318
           M  E I P+  TYNSLIHG+   G+  EA R+ +++   G  PN VTY+ LID  C++  
Sbjct: 313 MIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGL 372

Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT 378
             EA  +   M   G  P   TY S+L     EG + D N + + M +  + P     N 
Sbjct: 373 HAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNI 432

Query: 379 LINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAG 438
            I AYCK G    A    N+M + G M D   Y  +I G CK   +D A      M+D G
Sbjct: 433 EIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDG 492

Query: 439 FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQ 498
            SP   +++ L+ G+      E   +L  E + RG+  +V+ + ++I +  K+ KV  A+
Sbjct: 493 LSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEAR 552

Query: 499 RLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLK 549
           +LF+LM   G   + V Y ++ + Y+ AGE      +LDDM    L+I LK
Sbjct: 553 KLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDM----LLIGLK 599



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 136/546 (24%), Positives = 227/546 (41%), Gaps = 83/546 (15%)

Query: 27  AKLLNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIH 86
           AK + P+IA+         +L++   CC    L+  F    +      +    +   ++ 
Sbjct: 137 AKKVAPDIAT-------FGILISC--CCDAGCLNLGFAALGQIIKTGLRAQAVTFTPLLR 187

Query: 87  ILTKNKHFKSAQN-----MLEKIALRDFLSTPSVLNALVK----------IH----DDPD 127
            L   K    A N     M E     D  S  ++L  L            IH    D  +
Sbjct: 188 TLCAEKRTSDAMNIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDN 247

Query: 128 GNSHVLSWLVIFYANLKMTQDG--LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVW 185
              +V+S+  + +   K    G    +F +M  H + P++  C  +++ L K +  D   
Sbjct: 248 CPPNVVSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAE 307

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
            V ++M+   ++ N   YN LIH    S    +  ++L EM     R ++ TY+ LI   
Sbjct: 308 AVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCL 367

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGF------------------------- 280
           CK G+H EA  + + M + G  P+  TY SL+HG+                         
Sbjct: 368 CKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGR 427

Query: 281 ----------CREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREV 328
                     C+ GR+ EA   F  ++  G  P+ V YTT+IDG C+   L++A+     
Sbjct: 428 HVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQ 487

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M   G+ P ++T+N+++      G+   A  L  EM ++ I P+  T N++I+   K G 
Sbjct: 488 MIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGK 547

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
              A K+ + M  AG   +  +Y  +IHG+  A E+    +LL  ML  G  P+  +++ 
Sbjct: 548 VTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNT 607

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG 508
           L+DG                 VS GL  DV   + LI   C+  +++    LF  M G  
Sbjct: 608 LLDG----------------MVSMGLKPDVVTCKTLIDSCCEDGRIEDILTLFREMLGKA 651

Query: 509 ILGDSV 514
              D++
Sbjct: 652 DKTDTI 657



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 112/471 (23%), Positives = 204/471 (43%), Gaps = 52/471 (11%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMV-------WKVYKKMVQLG---V 196
           +D L +FD++        ++A   LL ++A+  ++  V         ++ +M + G   V
Sbjct: 81  EDALDLFDELLQRARPGSIYALNQLLTTVARAPVSSSVRDGPALAVSMFNRMARAGAKKV 140

Query: 197 VANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL- 255
             +I  + +LI  CC +  ++     L ++    +RA   T+  L+   C +    +A+ 
Sbjct: 141 APDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAVTFTPLLRTLCAEKRTSDAMN 200

Query: 256 AVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF----RDIKGATPNHVTYTTLID 311
            V  RM   G +PD+ +Y +L+ G C E +  EA  L      D     PN V+YTT+I 
Sbjct: 201 IVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSYTTVIH 260

Query: 312 GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAP 371
           G+ +  D+ +A  L   M   G+ P VVT NS++  LCK   +  A  +L +M ++ I P
Sbjct: 261 GFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMP 320

Query: 372 DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
           +  T N+LI+ Y   G    A+++   M   G   +  TY  LI   CK+     A+E+ 
Sbjct: 321 NCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIF 380

Query: 432 FGMLDAGFSPSYCSYSWLVDGYCNKNN--------------------------------- 458
             M+ +G  P+  +Y  L+ GY  + N                                 
Sbjct: 381 NSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAYCKC 440

Query: 459 ---EEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVI 515
              +EA L   ++   +G   D+  Y  +I   CK  ++D A   F  M  +G+  D + 
Sbjct: 441 GRLDEASLTF-NKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIIT 499

Query: 516 YTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
           + +L + +   G+ +   ++  +M  R +   +  + S      K+ ++ +
Sbjct: 500 FNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTE 550



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 86/305 (28%), Positives = 137/305 (44%), Gaps = 20/305 (6%)

Query: 115 VLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNS 174
           + N++++    P  N+     L+  YA      D   V D M  + + P  H   + + +
Sbjct: 379 IFNSMIQSGQKP--NASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYA 436

Query: 175 LAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRAD 234
             K    D     + KM Q G + +I  Y  +I   CK   +D      C+M    +  D
Sbjct: 437 YCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPD 496

Query: 235 LFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR 294
           + T+NTLI  +   G   +A  +   M   GI P++ T+NS+I    +EG++ EAR+LF 
Sbjct: 497 IITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEARKLFD 556

Query: 295 DIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEG 352
            +   GA PN V+Y T+I GY  A ++ E ++L + M   G+ P  VT+N+         
Sbjct: 557 LMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNT--------- 607

Query: 353 RIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYK 412
                  LL+ M    + PD VTC TLI++ C+ G     + +   ML      D  T  
Sbjct: 608 -------LLDGMVSMGLKPDVVTCKTLIDSCCEDGRIEDILTLFREMLGKADKTDTITEN 660

Query: 413 ALIHG 417
             + G
Sbjct: 661 IKLRG 665



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 67/274 (24%), Positives = 112/274 (40%), Gaps = 3/274 (1%)

Query: 297 KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRD 356
           K   P+  T+  LI   C A  L         +   G+    VT+  +LR LC E R  D
Sbjct: 138 KKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAVTFTPLLRTLCAEKRTSD 197

Query: 357 A-NRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAG--LMLDQFTYKA 413
           A N +L  M E    PD  +  TL+   C       A ++ + M E G     +  +Y  
Sbjct: 198 AMNIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSYTT 257

Query: 414 LIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
           +IHGF K  ++  A  L   MLD G  P+  + + ++DG C     +    +L + +   
Sbjct: 258 VIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEH 317

Query: 474 LCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACS 533
           +  + + Y +LI  +    +   A R+   M  +G   + V Y+ L     ++G      
Sbjct: 318 IMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAR 377

Query: 534 DILDDMYRRRLMITLKIYRSFSASYAKDNEILDL 567
           +I + M +         Y S    YA +  ++D+
Sbjct: 378 EIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDM 411


>gi|297816792|ref|XP_002876279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297322117|gb|EFH52538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 850

 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 126/470 (26%), Positives = 223/470 (47%), Gaps = 41/470 (8%)

Query: 149 GLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIH 208
            L +F +M      P+    +VL+   +K+   +   + YKKM  LG+  ++   + +I 
Sbjct: 357 ALDLFYKMENEGPSPNSVTFSVLIERFSKNGEMEKALEFYKKMESLGLTPSVFHVHTIIQ 416

Query: 209 ACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISP 268
              K    ++  KL  E  F+   A++F  NT+++  CK+G   +A  +  +ME  GI P
Sbjct: 417 GWLKGQKHEEALKLFDE-SFETGLANVFICNTILSWLCKQGKIDKATELLRKMESRGIGP 475

Query: 269 DIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLR 326
           ++V+YN+++   CR+  M  AR +F ++  KG  PN+ TY+ LIDG  + +D +  L + 
Sbjct: 476 NVVSYNNVMLAHCRKKNMDLARTVFSNMLEKGLKPNNYTYSILIDGCFKNHDEQNVLEVV 535

Query: 327 EVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKK------------------ 368
             M +  +    V Y +I+  LCK G+   A  LL  M E+K                  
Sbjct: 536 NQMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRFCVSCMSYNSIIDGFIK 595

Query: 369 ------------------IAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
                             I+P+ +T  +L++  CK      A+++++ M   G+ LD   
Sbjct: 596 EGEMDYAVAAYEEMCANGISPNVITYTSLMDGLCKNNRMDQALEMRDEMKNKGVKLDIPA 655

Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFV 470
           Y ALIHGFCK   M+ A  L   +L+ G +PS   Y+ L+ G+ N  N  A L L  + +
Sbjct: 656 YGALIHGFCKKSNMESASALFSELLEEGLNPSQPVYNSLISGFRNLGNMVAALDLYKKML 715

Query: 471 SRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPK 530
             GL  D+  Y  LI    K+  +  A  L+  MQ  G++ D ++YT +     + G+  
Sbjct: 716 KDGLRCDLGTYTTLIDGLLKEGNLILASDLYTEMQAVGLVPDEIMYTVIVNGLSKKGQFV 775

Query: 531 ACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSH--VVDRGLM 578
               + ++M +  +   + IY +  A + ++  + + F  H  ++D+G++
Sbjct: 776 KVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGIL 825



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 106/388 (27%), Positives = 196/388 (50%), Gaps = 7/388 (1%)

Query: 132 VLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKM 191
           +LSWL       K T+    +  +M    + P++ +   ++ +  + +  D+   V+  M
Sbjct: 448 ILSWLCKQGKIDKATE----LLRKMESRGIGPNVVSYNNVMLAHCRKKNMDLARTVFSNM 503

Query: 192 VQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMH 251
           ++ G+  N + Y++LI  C K+ D   V +++ +M   ++  +   Y T+I   CK G  
Sbjct: 504 LEKGLKPNNYTYSILIDGCFKNHDEQNVLEVVNQMTSSNIEVNGVVYQTIINGLCKVGQT 563

Query: 252 YEALAVQDRM-EREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTT 308
            +A  +   M E +      ++YNS+I GF +EG M  A   + ++   G +PN +TYT+
Sbjct: 564 SKARELLANMIEEKRFCVSCMSYNSIIDGFIKEGEMDYAVAAYEEMCANGISPNVITYTS 623

Query: 309 LIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKK 368
           L+DG C+ N +++AL +R+ M  KGV   +  Y +++   CK+  +  A+ L +E+ E+ 
Sbjct: 624 LMDGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIHGFCKKSNMESASALFSELLEEG 683

Query: 369 IAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAK 428
           + P     N+LI+ +  +G+  +A+ +  +ML+ GL  D  TY  LI G  K   + +A 
Sbjct: 684 LNPSQPVYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKEGNLILAS 743

Query: 429 ELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRF 488
           +L   M   G  P    Y+ +V+G   K     ++K+ +E     +  +V +Y A+I   
Sbjct: 744 DLYTEMQAVGLVPDEIMYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGH 803

Query: 489 CKKEKVDYAQRLFNLMQGNGILGDSVIY 516
            ++  +D A RL + M   GIL D   +
Sbjct: 804 YREGNLDEAFRLHDEMLDKGILPDGATF 831



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 123/507 (24%), Positives = 208/507 (41%), Gaps = 75/507 (14%)

Query: 42  AIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHIL-TKNKHFKSAQNM 100
           ++  VLLN  N    P  +  F+ WA     +++      W +IHIL T  + +  A ++
Sbjct: 73  SVIDVLLNRRNN---PEAALRFYNWARPWRGSFEDG-DVFWVLIHILVTSPETYGRASDL 128

Query: 101 LEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHN 160
           L +     ++ST                 S+      +  +NL          D  ++  
Sbjct: 129 LIR-----YVST-----------------SNPTPMASVLVSNL---------VDSAKLFG 157

Query: 161 LMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVE 220
              +  A   LLN+ +KDR TD    +  +M++LGV+  +   N  + A  + + + + +
Sbjct: 158 FEVNSRAFNYLLNAYSKDRQTDYAVDIVNQMLELGVIPFVPYVNRTLSALVQRNSITEAK 217

Query: 221 KLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGF 280
           +L               Y+ ++A+                    G+  D  T   L+   
Sbjct: 218 EL---------------YSRMVAI--------------------GVDGDNGTTQLLMRAS 242

Query: 281 CREGRMREARRLF-RDI-KGATPNHVTYTTLIDGYCRANDLEEALRL-REVMAAKGVYPG 337
            RE +  EA  +F R I +GA P+ + Y+  +   C+  +L  A  L RE+   K   P 
Sbjct: 243 LREEKPAEALEVFSRAIERGAEPDSLLYSLAVQACCKTLNLAMANSLLREMKEKKLCVPS 302

Query: 338 VVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKN 397
             TY S++    K+G + DA R  +EM    I+ + V   +LI  +CK  D  SA+ +  
Sbjct: 303 QETYTSVILASVKQGNMEDAIRWKDEMVSDGISMNVVAATSLITGHCKNNDLGSALDLFY 362

Query: 398 RMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKN 457
           +M   G   +  T+  LI  F K  EM+ A E    M   G +PS      ++ G+    
Sbjct: 363 KMENEGPSPNSVTFSVLIERFSKNGEMEKALEFYKKMESLGLTPSVFHVHTIIQGWLKGQ 422

Query: 458 NEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYT 517
             E  LKL DE    GL  +V +   ++   CK+ K+D A  L   M+  GI  + V Y 
Sbjct: 423 KHEEALKLFDESFETGLA-NVFICNTILSWLCKQGKIDKATELLRKMESRGIGPNVVSYN 481

Query: 518 SLAYAYWRAGEPKACSDILDDMYRRRL 544
           ++  A+ R         +  +M  + L
Sbjct: 482 NVMLAHCRKKNMDLARTVFSNMLEKGL 508



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 85/313 (27%), Positives = 144/313 (46%), Gaps = 3/313 (0%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG-VVANIHLYNV 205
           Q+ L+V +QM   N+  +      ++N L K   T    ++   M++      +   YN 
Sbjct: 529 QNVLEVVNQMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRFCVSCMSYNS 588

Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
           +I    K  ++D       EM    +  ++ TY +L+   CK     +AL ++D M+ +G
Sbjct: 589 IIDGFIKEGEMDYAVAAYEEMCANGISPNVITYTSLMDGLCKNNRMDQALEMRDEMKNKG 648

Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEAL 323
           +  DI  Y +LIHGFC++  M  A  LF ++  +G  P+   Y +LI G+    ++  AL
Sbjct: 649 VKLDIPAYGALIHGFCKKSNMESASALFSELLEEGLNPSQPVYNSLISGFRNLGNMVAAL 708

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
            L + M   G+   + TY +++  L KEG +  A+ L  EM    + PD +    ++N  
Sbjct: 709 DLYKKMLKDGLRCDLGTYTTLIDGLLKEGNLILASDLYTEMQAVGLVPDEIMYTVIVNGL 768

Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY 443
            K G     +K+   M +  +  +   Y A+I G  +   +D A  L   MLD G  P  
Sbjct: 769 SKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDG 828

Query: 444 CSYSWLVDGYCNK 456
            ++  LV G   K
Sbjct: 829 ATFDILVSGKVGK 841



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/205 (23%), Positives = 91/205 (44%), Gaps = 17/205 (8%)

Query: 75  KHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLS 134
           K  + ++  +IH   K  + +SA  +  ++       +  V N+L+              
Sbjct: 650 KLDIPAYGALIHGFCKKSNMESASALFSELLEEGLNPSQPVYNSLIS------------- 696

Query: 135 WLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQL 194
                + NL      L ++ +M    L   L   T L++ L K+    +   +Y +M  +
Sbjct: 697 ----GFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKEGNLILASDLYTEMQAV 752

Query: 195 GVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEA 254
           G+V +  +Y V+++   K     KV K+  EM+  +V  ++  YN +IA + ++G   EA
Sbjct: 753 GLVPDEIMYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEA 812

Query: 255 LAVQDRMEREGISPDIVTYNSLIHG 279
             + D M  +GI PD  T++ L+ G
Sbjct: 813 FRLHDEMLDKGILPDGATFDILVSG 837


>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 548

 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 117/384 (30%), Positives = 201/384 (52%), Gaps = 16/384 (4%)

Query: 171 LLNSLAK-DRLT---DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEM 226
           L+N L K  R+T    ++ +V  K+VQ   V    +YN++I   CK+  V+    L  +M
Sbjct: 172 LINGLCKVGRITAALQLLKRVDGKLVQPNAV----MYNMIIDNMCKAKLVNDAFDLYSQM 227

Query: 227 EFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRM 286
             K +  D+FTYN LI+ +        A+ + ++M++E I+P++ T+N L+ GFC+EG++
Sbjct: 228 VAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKV 287

Query: 287 REARRLFR-----DIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTY 341
            +A+ +       DIK   P+ VTY +L+DGYC  N + +A  + + MA+ GV   V  Y
Sbjct: 288 NDAKVVLAIMMKDDIK---PDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIY 344

Query: 342 NSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLE 401
            +++   CK   + +A  L  EM  +KI P+ VT ++LI+  CK+G    A+K+ + M +
Sbjct: 345 TTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHD 404

Query: 402 AGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEA 461
            G   +  TY +++   CK   +D A  LL  + D G  P   +Y+ L+ G C     E 
Sbjct: 405 RGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLED 464

Query: 462 LLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAY 521
              + ++ + +G  +DV  Y  +I+ FC K   D A  L + M+ NG + ++  Y  +  
Sbjct: 465 AQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVIL 524

Query: 522 AYWRAGEPKACSDILDDMYRRRLM 545
           + +   E      +L +M  R L+
Sbjct: 525 SLFEKDENDTAEKLLREMIVRGLL 548



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 101/364 (27%), Positives = 185/364 (50%), Gaps = 2/364 (0%)

Query: 203 YNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRME 262
           +N ++ +  K+        L  +ME   + +D FT+N LI  + + G++  + ++  ++ 
Sbjct: 64  FNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFSIFAKIL 123

Query: 263 REGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLE 320
           ++G  P  +T+N+LI G C +G + +A      +  +G   + V+Y TLI+G C+   + 
Sbjct: 124 KKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRIT 183

Query: 321 EALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLI 380
            AL+L + +  K V P  V YN I+  +CK   + DA  L ++M  K+I PD  T N LI
Sbjct: 184 AALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALI 243

Query: 381 NAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFS 440
           + +  +     A+ + N+M +  +  + +T+  L+ GFCK  +++ AK +L  M+     
Sbjct: 244 SGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIK 303

Query: 441 PSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRL 500
           P   +Y+ L+DGYC+ N       + D   S G+  +V +Y  ++  FCK + VD A  L
Sbjct: 304 PDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINL 363

Query: 501 FNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAK 560
           F  M+   I+ + V Y+SL     + G       ++D+M+ R     +  Y S   +  K
Sbjct: 364 FEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCK 423

Query: 561 DNEI 564
           ++ +
Sbjct: 424 NHHV 427



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 117/426 (27%), Positives = 195/426 (45%), Gaps = 40/426 (9%)

Query: 153 FDQMRVH-NLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           F+ + +H N  P       +L+SL K +       ++++M   G+ ++   +N+LI+ C 
Sbjct: 48  FNHLLLHKNPTPPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILIN-CF 106

Query: 212 KSSDVDKVE-KLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
               ++ +   +  ++  K       T+NTLI   C KG  ++AL   D++  +G   D 
Sbjct: 107 SQLGLNSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQ 166

Query: 271 VTYNSLIHGFCREGRMREARRLFRDIKG--ATPNHVTYTTLIDGYCRANDLEEALRLREV 328
           V+Y +LI+G C+ GR+  A +L + + G    PN V Y  +ID  C+A  + +A  L   
Sbjct: 167 VSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQ 226

Query: 329 MAAKGVYPGVVTYNSILRKL-----------------------------------CKEGR 353
           M AK + P V TYN+++                                      CKEG+
Sbjct: 227 MVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGK 286

Query: 354 IRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKA 413
           + DA  +L  M +  I PD VT N+L++ YC I     A  + + M   G++ +   Y  
Sbjct: 287 VNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTT 346

Query: 414 LIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
           +++GFCK K +D A  L   M      P+  +YS L+DG C        LKL+DE   RG
Sbjct: 347 MVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRG 406

Query: 474 LCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACS 533
              ++  Y +++   CK   VD A  L   ++  GI  D   YT L     ++G  +   
Sbjct: 407 QPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQ 466

Query: 534 DILDDM 539
           ++ +D+
Sbjct: 467 NVFEDL 472



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 62/268 (23%), Positives = 98/268 (36%), Gaps = 35/268 (13%)

Query: 332 KGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTAS 391
           K   P    +N IL  L K      A  L  +M    I  D  T N LIN + ++G  + 
Sbjct: 55  KNPTPPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSL 114

Query: 392 AMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVD 451
           +  +  ++L+ G      T+  LI G C    +  A      ++  GF     SY  L++
Sbjct: 115 SFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLIN 174

Query: 452 GYCNKNNEEALLKLL-----------------------------------DEFVSRGLCV 476
           G C      A L+LL                                    + V++ +C 
Sbjct: 175 GLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICP 234

Query: 477 DVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDIL 536
           DV  Y ALI  F    K++YA  LFN M+   I  +   +  L   + + G+      +L
Sbjct: 235 DVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVL 294

Query: 537 DDMYRRRLMITLKIYRSFSASYAKDNEI 564
             M +  +   +  Y S    Y   N++
Sbjct: 295 AIMMKDDIKPDVVTYNSLMDGYCSINKV 322



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 50/220 (22%), Positives = 100/220 (45%), Gaps = 17/220 (7%)

Query: 77  SLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWL 136
           ++Q + TM++   K K    A N+ E++  R  +      ++L+      DG   +    
Sbjct: 340 NVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLI------DG---LCKLG 390

Query: 137 VIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGV 196
            IFYA        L++ D+M      P++   + +L++L K+   D    +   +   G+
Sbjct: 391 RIFYA--------LKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGI 442

Query: 197 VANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALA 256
             +++ Y +LI   C+S  ++  + +  ++  K    D++ Y  +I  +C KG   +ALA
Sbjct: 443 RPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALA 502

Query: 257 VQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI 296
           +  +ME  G  P+  TY  +I     +     A +L R++
Sbjct: 503 LLSKMEDNGCIPNAKTYELVILSLFEKDENDTAEKLLREM 542



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 52/243 (21%), Positives = 106/243 (43%), Gaps = 12/243 (4%)

Query: 333 GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE----KKIAPDNVTCNTLINAYCKIGD 388
           G++P  +   S L       +  + N L++  N     K   P     N ++++  K   
Sbjct: 22  GLFPSSIRLFSQLHH-----KQDEENNLISSFNHLLLHKNPTPPTFQFNKILSSLVKAKH 76

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
            ++A+ +  +M   G+  D FT+  LI+ F +     ++  +   +L  G+ P+  +++ 
Sbjct: 77  HSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFSIFAKILKKGYHPTAITFNT 136

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG 508
           L+ G C K +    L   D+ V++G  +D   Y  LI   CK  ++  A +L   + G  
Sbjct: 137 LIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKL 196

Query: 509 ILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASY---AKDNEIL 565
           +  ++V+Y  +     +A       D+   M  +R+   +  Y +  + +   +K N  +
Sbjct: 197 VQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAI 256

Query: 566 DLF 568
           DLF
Sbjct: 257 DLF 259


>gi|115486223|ref|NP_001068255.1| Os11g0607100 [Oryza sativa Japonica Group]
 gi|77551887|gb|ABA94684.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113645477|dbj|BAF28618.1| Os11g0607100 [Oryza sativa Japonica Group]
          Length = 671

 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 119/419 (28%), Positives = 208/419 (49%), Gaps = 8/419 (1%)

Query: 168 CTVLLNSLA-KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEM 226
           CTV++ SL  K R  D V + +++M++ G   N+  Y   I   CK   V +   +L EM
Sbjct: 219 CTVVVRSLCEKGRFKD-VSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEM 277

Query: 227 EFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRM-EREGISPDIVTYNSLIHGFCREGR 285
             + ++ +++T+ TLI   CK G    A  +  ++ +     P++ TY  +I G+CREG+
Sbjct: 278 VGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGK 337

Query: 286 MREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNS 343
           +  A  L   +  +G  PN  TYTTLI G+C+    + A  L   M  +G  P + TYN+
Sbjct: 338 LARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNA 397

Query: 344 ILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAG 403
           ++   CK+G+I++A ++L     + +  D +T   LI  +CK G    A+ + +RM+E G
Sbjct: 398 VIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENG 457

Query: 404 LMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALL 463
              D   Y +LI  +C+ ++M+ +++     L  G  P+  +Y+ ++ GYC        L
Sbjct: 458 CCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLAL 517

Query: 464 KLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAY 523
           ++ +  V  G   D   Y ALI   CK+ +++ A+ L+  M    ++   V   +L + Y
Sbjct: 518 RVFERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEY 577

Query: 524 WRAGEPKACSDILDDMYRRRLMITLK-IYRSFSASYAKDNEILDLFWSHVVDRGLMSKH 581
            R  +      +LD + +R+ + T+  + R  SA    D +   LF   V+D      H
Sbjct: 578 CRREKTSIAVSVLDRLDKRQQVHTVDVVVRKLSA--LGDVDAASLFLKKVLDEDYAVDH 634



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 102/357 (28%), Positives = 175/357 (49%), Gaps = 3/357 (0%)

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
           KV+  M + GV  +   +  L+  CC+   V++V+ LL  M       D  T   ++   
Sbjct: 167 KVFDGMTRAGVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSL 226

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNH 303
           C+KG   +      RM   G  P++V Y + I G C+   +++A  +  ++  +G  PN 
Sbjct: 227 CEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNV 286

Query: 304 VTYTTLIDGYCRANDLEEALRL-REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLN 362
            T+TTLIDG C+    E A RL  +++ +    P V TY  ++   C+EG++  A  LL 
Sbjct: 287 YTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLV 346

Query: 363 EMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAK 422
            M E+ + P+  T  TLI  +CK G    A ++ N+M + G + + +TY A+I GFCK  
Sbjct: 347 RMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKG 406

Query: 423 EMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYR 482
           ++  A ++L      G      +Y+ L+  +C + +    L L D  V  G C D+  Y 
Sbjct: 407 KIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYT 466

Query: 483 ALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
           +LI  +C++ +++ +Q+ F+     G+L     YTS+   Y + G       + + M
Sbjct: 467 SLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERM 523



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 106/411 (25%), Positives = 180/411 (43%), Gaps = 41/411 (9%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           +D  + F +M      P++   T  ++ L K R     + V ++MV  G+  N++ +  L
Sbjct: 233 KDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTL 292

Query: 207 IHACCK------------------------------------SSDVDKVEKLLCEMEFKD 230
           I   CK                                       + + E LL  M  + 
Sbjct: 293 IDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQG 352

Query: 231 VRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREAR 290
           ++ +  TY TLI  +CK G    A  + ++M++EG  P+I TYN++I GFC++G+++EA 
Sbjct: 353 LKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAY 412

Query: 291 RLFR--DIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
           ++ R    +G   + +TYT LI  +C+   +  AL L + M   G  P +  Y S++   
Sbjct: 413 KVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTY 472

Query: 349 CKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ 408
           C++ ++ ++ +  ++     + P   T  ++I  YCK+G +  A++V  RM++ G   D 
Sbjct: 473 CQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADS 532

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
            TY ALI G CK   ++ AK L  GMLD    P   +   L   YC +      + +LD 
Sbjct: 533 ITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVSVLDR 592

Query: 469 FVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
              R     V V   ++R+      VD A      +       D   YT  
Sbjct: 593 LDKRQQVHTVDV---VVRKLSALGDVDAASLFLKKVLDEDYAVDHATYTGF 640



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 114/388 (29%), Positives = 167/388 (43%), Gaps = 50/388 (12%)

Query: 237 TYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRL---- 292
           T N ++ +  + G    A  V D M R G+ PD  ++ +L+   CREG++ E   L    
Sbjct: 148 TANWVLRVGLETGSFVYARKVFDGMTRAGVCPDERSFRALVVVCCREGKVEEVDALLAAM 207

Query: 293 ------------------------FRDIK---------GATPNHVTYTTLIDGYCRANDL 319
                                   F+D+          G  PN V YT  IDG C+   +
Sbjct: 208 WRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYV 267

Query: 320 EEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRL-LNEMNEKKIAPDNVTCNT 378
           ++A  + E M  +G+ P V T+ +++  LCK G    A RL L  +      P+  T   
Sbjct: 268 KQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTV 327

Query: 379 LINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAG 438
           +I  YC+ G  A A  +  RM+E GL  +  TY  LI G CK    D A EL+  M   G
Sbjct: 328 MIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEG 387

Query: 439 FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQ 498
           F P+  +Y+ ++DG+C K   +   K+L    S+GL  D   Y  LI   CK+  + YA 
Sbjct: 388 FLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYAL 447

Query: 499 RLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASY 558
            LF+ M  NG   D   YTSL   Y +  + +      D      L+ T + Y S  A Y
Sbjct: 448 DLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGY 507

Query: 559 AKDNEILDLFWSHVVDRGLMSKHIFKEM 586
            K            V R  ++  +F+ M
Sbjct: 508 CK------------VGRSTLALRVFERM 523



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 113/431 (26%), Positives = 198/431 (45%), Gaps = 28/431 (6%)

Query: 63  FFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALR----DFLSTPSVLNA 118
           F +  E+  P    ++ ++   I  L K ++ K A ++LE++  R    +  +  ++++ 
Sbjct: 239 FRRMLETGTPP---NVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDG 295

Query: 119 LVKI---------------HDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMP 163
           L KI                     N H  + ++  Y           +  +M    L P
Sbjct: 296 LCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKP 355

Query: 164 HLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLL 223
           + +  T L+    K    D  +++  KM Q G + NI+ YN +I   CK   + +  K+L
Sbjct: 356 NTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVL 415

Query: 224 CEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCRE 283
                + ++ D  TY  LI  +CK+G    AL + DRM   G  PDI  Y SLI  +C++
Sbjct: 416 RMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQ 475

Query: 284 GRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTY 341
            +M E+++ F    + G  P   TYT++I GYC+      ALR+ E M   G +   +TY
Sbjct: 476 RQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITY 535

Query: 342 NSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLE 401
            +++  LCKE R+ +A  L   M +K++ P  VT  TL   YC+   T+ A+ V +R+ +
Sbjct: 536 GALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVSVLDRLDK 595

Query: 402 AGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEA 461
              +    T   ++       ++D A   L  +LD  ++  + +Y+  ++  C +NN  A
Sbjct: 596 RQQV---HTVDVVVRKLSALGDVDAASLFLKKVLDEDYAVDHATYTGFINS-CYENNRYA 651

Query: 462 LLKLLDEFVSR 472
           L   + E  S+
Sbjct: 652 LASEMSEKFSK 662



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 89/352 (25%), Positives = 148/352 (42%), Gaps = 24/352 (6%)

Query: 34  IASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKH 93
           I SS     +H   + +   C    L+ A            K +  ++ T+I    K   
Sbjct: 313 IKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGS 372

Query: 94  FKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKM-TQDGLQV 152
           F  A  ++ K+    FL      NA++      DG       +   Y  L+M T  GL+ 
Sbjct: 373 FDRAFELMNKMKQEGFLPNIYTYNAVI------DGFCKK-GKIQEAYKVLRMATSQGLK- 424

Query: 153 FDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCK 212
           FD++            T+L+    K         ++ +MV+ G   +I  Y  LI   C+
Sbjct: 425 FDKITY----------TILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQ 474

Query: 213 SSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVT 272
              +++ +K   +     +     TY ++IA YCK G    AL V +RM + G   D +T
Sbjct: 475 QRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSIT 534

Query: 273 YNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMA 330
           Y +LI G C+E R+ EA+ L+  +  K   P  VT  TL   YCR      A+ + + + 
Sbjct: 535 YGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVSVLDRLD 594

Query: 331 AKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            +     V T + ++RKL   G +  A+  L ++ ++  A D+ T    IN+
Sbjct: 595 KR---QQVHTVDVVVRKLSALGDVDAASLFLKKVLDEDYAVDHATYTGFINS 643



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 63/268 (23%), Positives = 106/268 (39%), Gaps = 2/268 (0%)

Query: 297 KGATP-NHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIR 355
           +G+ P  H     ++  +  A  L EA  +   M + G+   V T N +LR   + G   
Sbjct: 104 RGSLPMAHEVMRGMVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFV 163

Query: 356 DANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALI 415
            A ++ + M    + PD  +   L+   C+ G       +   M   G  LD  T   ++
Sbjct: 164 YARKVFDGMTRAGVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVV 223

Query: 416 HGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLC 475
              C+        E    ML+ G  P+  +Y+  +DG C +   +    +L+E V RGL 
Sbjct: 224 RSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLK 283

Query: 476 VDVSVYRALIRRFCKKEKVDYAQRLF-NLMQGNGILGDSVIYTSLAYAYWRAGEPKACSD 534
            +V  +  LI   CK    + A RLF  L++ +    +   YT +   Y R G+      
Sbjct: 284 PNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEM 343

Query: 535 ILDDMYRRRLMITLKIYRSFSASYAKDN 562
           +L  M  + L      Y +    + K  
Sbjct: 344 LLVRMVEQGLKPNTNTYTTLIGGHCKGG 371


>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
 gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
          Length = 729

 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 113/355 (31%), Positives = 174/355 (49%), Gaps = 10/355 (2%)

Query: 168 CTVLLNSL-AKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEM 226
           C +L+  L +  R+ D      +    LG  A +  YN +++  C++  ++   +L+  M
Sbjct: 101 CNILIKRLCSGGRVAD----AERVFATLGASATVVTYNTMVNGYCRAGRIEDARRLISGM 156

Query: 227 EFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRM 286
            F     D FT+N LI   C +G   +ALAV D M   G SP +VTY+ L+   C+    
Sbjct: 157 PFP---PDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGY 213

Query: 287 REARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSI 344
           R+A  L  ++  KG  P+ VTY  LI+  C   D++EAL +   + + G  P  VTY  +
Sbjct: 214 RQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPV 273

Query: 345 LRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGL 404
           L+ LC   R ++   L  EM   K APD VT NT++ + C+ G    A+KV + M E G 
Sbjct: 274 LKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGC 333

Query: 405 MLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLK 464
           + D  TY +++ G C    +D A ELL  +   G  P   +Y+ ++ G C+    E   +
Sbjct: 334 IPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEE 393

Query: 465 LLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
           L+ E V      D   +  +I   C+K  VD A ++   M  NG   D V Y S+
Sbjct: 394 LMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSI 448



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 109/438 (24%), Positives = 200/438 (45%), Gaps = 6/438 (1%)

Query: 129 NSHVLSWLVIFYANLKMT--QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWK 186
           +  V+++ ++  A  K +  +  + + D+MR     P +    VL+N++  +   D    
Sbjct: 194 SPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALN 253

Query: 187 VYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYC 246
           +   +   G   +   Y  ++ + C S    +VE+L  EM       D  T+NT++   C
Sbjct: 254 ILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLC 313

Query: 247 KKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHV 304
           ++G+   A+ V D M   G  PDIVTY+S++ G C  GR+ +A  L   +K  G  P+ +
Sbjct: 314 QQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTI 373

Query: 305 TYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM 364
            YTT++ G C     E A  L   M      P  VT+N+++  LC++G +  A +++ +M
Sbjct: 374 AYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQM 433

Query: 365 NEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEM 424
           +E    PD VT N++I+  C       AM++ + +   G   D  T+  L+ G C     
Sbjct: 434 SENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRW 493

Query: 425 DIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRAL 484
           + A++L+  M+ +   P   +++ ++   C K      ++ L      G   + S Y  +
Sbjct: 494 EDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIV 553

Query: 485 IRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL 544
           +    K  K   A +L + M  NG   D + Y ++     +AG+ +   D+L  M    L
Sbjct: 554 VDALLKAGKTQEALKLLSGMT-NGT-PDLITYNTVISNITKAGKMEEALDLLRVMVSNGL 611

Query: 545 MITLKIYRSFSASYAKDN 562
                 YRS +    +++
Sbjct: 612 SPDTITYRSLAYGICRED 629



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 113/424 (26%), Positives = 191/424 (45%), Gaps = 3/424 (0%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D L VFD M      P +   ++LL++  K         +  +M   G   +I  YNVLI
Sbjct: 180 DALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLI 239

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           +A C   DVD+   +L ++     + D  TY  ++   C      E   +   M     +
Sbjct: 240 NAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCA 299

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRL 325
           PD VT+N+++   C++G +  A ++   +   G  P+ VTY++++DG C    +++A+ L
Sbjct: 300 PDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVEL 359

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
              + + G  P  + Y ++L+ LC   +   A  L+ EM      PD VT NT+I + C+
Sbjct: 360 LSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQ 419

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            G    A+KV  +M E G   D  TY ++I G C  + +D A ELL  +   G  P   +
Sbjct: 420 KGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVT 479

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           ++ L+ G C+ +  E   +L+   +      D + +  +I   C+K  +  A     +M 
Sbjct: 480 FNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMA 539

Query: 506 GNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL-MITLKIYRSFSASYAKDNEI 564
            NG + +   Y  +  A  +AG+ +    +L  M      +IT     S      K  E 
Sbjct: 540 ENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNGTPDLITYNTVISNITKAGKMEEA 599

Query: 565 LDLF 568
           LDL 
Sbjct: 600 LDLL 603



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 103/380 (27%), Positives = 175/380 (46%), Gaps = 7/380 (1%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           ++F +M  +   P       ++ SL +  L D   KV   M + G + +I  Y+ ++   
Sbjct: 288 ELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGL 347

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           C    VD   +LL  ++    + D   Y T++   C       A  +   M      PD 
Sbjct: 348 CDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDE 407

Query: 271 VTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREV 328
           VT+N++I   C++G +  A ++   +   G  P+ VTY ++IDG C    +++A+ L   
Sbjct: 408 VTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSN 467

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           + + G  P +VT+N++L+ LC   R  DA +L+  M      PD  T NT+I + C+ G 
Sbjct: 468 LQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGL 527

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
              A++    M E G + +Q TY  ++    KA +   A +LL GM +   +P   +Y+ 
Sbjct: 528 LLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNG--TPDLITYNT 585

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG 508
           ++         E  L LL   VS GL  D   YR+L    C+++  D A R+   +Q  G
Sbjct: 586 VISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMG 645

Query: 509 ILGDSVIYTSLAYAY---WR 525
           +  D+  Y  +   +   WR
Sbjct: 646 LSPDATFYNDILLGFCQNWR 665



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 111/411 (27%), Positives = 184/411 (44%), Gaps = 39/411 (9%)

Query: 149 GLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIH 208
            ++V D M  H  +P +   + +L+ L      D   ++  ++   G   +   Y  ++ 
Sbjct: 321 AIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLK 380

Query: 209 ACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISP 268
             C     +  E+L+ EM   D   D  T+NT+IA  C+KG+   A+ V ++M   G +P
Sbjct: 381 GLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNP 440

Query: 269 DIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLR 326
           DIVTYNS+I G C E  + +A  L  +++  G  P+ VT+ TL+ G C  +  E+A +L 
Sbjct: 441 DIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLM 500

Query: 327 -----------------------------------EVMAAKGVYPGVVTYNSILRKLCKE 351
                                              ++MA  G  P   TYN ++  L K 
Sbjct: 501 VNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKA 560

Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
           G+ ++A +LL+ M      PD +T NT+I+   K G    A+ +   M+  GL  D  TY
Sbjct: 561 GKTQEALKLLSGMTNG--TPDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITY 618

Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
           ++L +G C+    D A  +L  + D G SP    Y+ ++ G+C     +  +      VS
Sbjct: 619 RSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHMVS 678

Query: 472 RGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYA 522
            G   D S Y  L+     +  +D A++L   +   G+L  S+I     Y+
Sbjct: 679 SGCMPDESTYIILLEALAYECLLDEAKQLLVNLCSLGVLDKSLIEEESHYS 729



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 80/272 (29%), Positives = 134/272 (49%), Gaps = 9/272 (3%)

Query: 253 EALAVQDRMEREGISP-----DIVTYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYT 307
           +ALA+ D +   G S       +V  N LI   C  GR+ +A R+F  + GA+   VTY 
Sbjct: 76  DALALVDSIASGGGSGKCLPLPVVPCNILIKRLCSGGRVADAERVFATL-GASATVVTYN 134

Query: 308 TLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEK 367
           T+++GYCRA  +E+A RL   ++     P   T+N ++R LC  GR+ DA  + ++M  +
Sbjct: 135 TMVNGYCRAGRIEDARRL---ISGMPFPPDTFTFNPLIRALCVRGRVPDALAVFDDMLHR 191

Query: 368 KIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIA 427
             +P  VT + L++A CK      AM + + M   G   D  TY  LI+  C   ++D A
Sbjct: 192 GCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEA 251

Query: 428 KELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRR 487
             +L  +   G  P   +Y+ ++   C     + + +L  E  S     D   +  ++  
Sbjct: 252 LNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTS 311

Query: 488 FCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
            C++  VD A ++ + M  +G + D V Y+S+
Sbjct: 312 LCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSI 343



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 106/251 (42%), Gaps = 6/251 (2%)

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
           V    LI   C    + +A R   V A  G    VVTYN+++   C+ GRI DA RL++ 
Sbjct: 99  VPCNILIKRLCSGGRVADAER---VFATLGASATVVTYNTMVNGYCRAGRIEDARRLISG 155

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
           M      PD  T N LI A C  G    A+ V + ML  G      TY  L+   CKA  
Sbjct: 156 M---PFPPDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASG 212

Query: 424 MDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRA 483
              A  LL  M   G  P   +Y+ L++  CN+ + +  L +L +  S G   D   Y  
Sbjct: 213 YRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTP 272

Query: 484 LIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRR 543
           +++  C  E+    + LF  M  N    D V + ++  +  + G       ++D M    
Sbjct: 273 VLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHG 332

Query: 544 LMITLKIYRSF 554
            +  +  Y S 
Sbjct: 333 CIPDIVTYSSI 343



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 99/207 (47%), Gaps = 11/207 (5%)

Query: 318 DLEEALRLREVMAAKG----VYP-GVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPD 372
           ++++AL L + +A+ G      P  VV  N ++++LC  GR+ DA R+   +        
Sbjct: 73  EIDDALALVDSIASGGGSGKCLPLPVVPCNILIKRLCSGGRVADAERVFATLGASATV-- 130

Query: 373 NVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLF 432
            VT NT++N YC+ G    A ++ + M       D FT+  LI   C    +  A  +  
Sbjct: 131 -VTYNTMVNGYCRAGRIEDARRLISGM---PFPPDTFTFNPLIRALCVRGRVPDALAVFD 186

Query: 433 GMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKE 492
            ML  G SPS  +YS L+D  C  +     + LLDE  ++G   D+  Y  LI   C + 
Sbjct: 187 DMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEG 246

Query: 493 KVDYAQRLFNLMQGNGILGDSVIYTSL 519
            VD A  + + +  +G   D+V YT +
Sbjct: 247 DVDEALNILSDLPSHGCKPDAVTYTPV 273


>gi|449489553|ref|XP_004158346.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g55840-like [Cucumis sativus]
          Length = 1079

 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 131/520 (25%), Positives = 231/520 (44%), Gaps = 41/520 (7%)

Query: 59  LSCAFFKWAESAVPNYKHSLQSHWTMI--HILTKNKHFKSAQNMLEKIALRDFLSTPSVL 116
           L+  F KW     P  + +  +H   I  H+L + + +  A+++L+ +A ++  S   + 
Sbjct: 34  LALKFLKWVIKQ-PGLEPNHLTHILGITTHVLVRARLYGYAKSILKHLAQKNSGSN-FLF 91

Query: 117 NALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLA 176
             L+  +     N  V   L+  Y    M    +  F  M +    P ++ C +++ S+ 
Sbjct: 92  GVLMDTYPLCSSNPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMV 151

Query: 177 KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLF 236
           K+    +VW  +K+M+   V  N+  +N+LI   C    + K   +L  ME       + 
Sbjct: 152 KNCRAHLVWXFFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIV 211

Query: 237 TYNTLIALYCKKGMHYEALAVQDRMEREGISPDI-------------------------- 270
           +YNTL++  CKKG    AL +   ME +GI  D+                          
Sbjct: 212 SYNTLLSWCCKKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKM 271

Query: 271 ---------VTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDL 319
                    V+YN+LI+GF +EG++  A R+F ++     +PN +TY  LI+GYC   + 
Sbjct: 272 RNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNF 331

Query: 320 EEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTL 379
           EEALRL +VM A  V P  VT  ++L  L K  +   A  +L   +  + + + ++   +
Sbjct: 332 EEALRLLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYSINRTSLNCISHTVM 391

Query: 380 INAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGF 439
           I+  C+ G    A ++   M + G+  D  T+  LI+GFCK   ++ AKE++  +   GF
Sbjct: 392 IDGLCRNGLLDEAFQLLIEMCKDGVYPDIITFSVLINGFCKVGNLNKAKEVMSKIYREGF 451

Query: 440 SPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQR 499
            P+   +S L+   C   N    +K        G   D     +L+   C+  K+  A+ 
Sbjct: 452 VPNNVIFSTLIYNSCKVGNVYEGMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEE 511

Query: 500 LFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
             + +   G++ +SV +  +   Y   G+      + D M
Sbjct: 512 FLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDKM 551



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 100/383 (26%), Positives = 184/383 (48%), Gaps = 4/383 (1%)

Query: 167 ACT--VLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLC 224
            CT  + ++SL ++  +   + V KKM    +  N   YN LI+   K   +    ++  
Sbjct: 245 VCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFN 304

Query: 225 EMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREG 284
           EM   ++  +L TYN LI  YC  G   EAL + D ME   + P+ VT  +L++G  +  
Sbjct: 305 EMIELNLSPNLITYNILINGYCINGNFEEALRLLDVMEANDVRPNEVTIGTLLNGLYKSA 364

Query: 285 RMREARRLFR--DIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYN 342
           +   AR +     I   + N +++T +IDG CR   L+EA +L   M   GVYP ++T++
Sbjct: 365 KFDVARNILERYSINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVYPDIITFS 424

Query: 343 SILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEA 402
            ++   CK G +  A  +++++  +   P+NV  +TLI   CK+G+    MK    M   
Sbjct: 425 VLINGFCKVGNLNKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEGMKFYAAMNLN 484

Query: 403 GLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEAL 462
           G   D FT  +L+   C+  ++  A+E L  +   G  P+  ++  +++GY N  +    
Sbjct: 485 GQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGA 544

Query: 463 LKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYA 522
             + D+ +S G       Y +L++  CK +    A++L   +    +  D++ Y +L   
Sbjct: 545 FSVFDKMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVE 604

Query: 523 YWRAGEPKACSDILDDMYRRRLM 545
             ++G       + ++M +  ++
Sbjct: 605 ISKSGNLLEAVRLFEEMIQNNIL 627



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 90/383 (23%), Positives = 176/383 (45%), Gaps = 3/383 (0%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           +  Q+  +M    + P +   +VL+N   K    +   +V  K+ + G V N  +++ LI
Sbjct: 403 EAFQLLIEMCKDGVYPDIITFSVLINGFCKVGNLNKAKEVMSKIYREGFVPNNVIFSTLI 462

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           +  CK  +V +  K    M      AD FT N+L+A  C+ G   EA      + R G+ 
Sbjct: 463 YNSCKVGNVYEGMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLV 522

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRL 325
           P+ VT++ +I+G+   G    A  +F  +   G  P+  TY +L+   C+  +  EA +L
Sbjct: 523 PNSVTFDCIINGYANVGDGSGAFSVFDKMISCGHHPSPFTYGSLLKVLCKGQNFWEARKL 582

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
            + +    +    ++YN+++ ++ K G + +A RL  EM +  I PD+ T   +++   +
Sbjct: 583 LKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIR 642

Query: 386 IGDTASAMKVKNRMLEAGLM-LDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
            G    A     R+++  ++ L+   Y   I G  KA +   A  L   M + G S    
Sbjct: 643 EGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLI 702

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
           + + + DGY       +   L+ +  ++ +  +++ +  L+  + + + +    +L+NLM
Sbjct: 703 ALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLM 762

Query: 505 QGNGILGDSVIYTSLAYAYWRAG 527
           + +G   + + Y SL       G
Sbjct: 763 RRSGFFPNRLTYHSLILGLCNHG 785



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 119/529 (22%), Positives = 206/529 (38%), Gaps = 75/529 (14%)

Query: 129  NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
            NS     ++  YAN+        VFD+M      P       LL  L K +      K+ 
Sbjct: 524  NSVTFDCIINGYANVGDGSGAFSVFDKMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLL 583

Query: 189  KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIA----- 243
            KK+  + +  +   YN LI    KS ++ +  +L  EM   ++  D +TY  +++     
Sbjct: 584  KKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIRE 643

Query: 244  --LYC-----------------------------KKGMHYEALAVQDRMEREGISPDIVT 272
              L C                             K G    AL +   ME +G+S D++ 
Sbjct: 644  GRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIA 703

Query: 273  YNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMA 330
             NS+  G+ R G++  A  L      K   PN  T+  L+ GY R  D+    +L  +M 
Sbjct: 704  LNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMR 763

Query: 331  AKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTA 390
              G +P  +TY+S++  LC  G +    ++L     +    D++T N LI   C+I D  
Sbjct: 764  RSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLD 823

Query: 391  SAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLV 450
              + + + M    + LD+ T KA+     +          +  ML  GF P+   Y  ++
Sbjct: 824  KVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMM 883

Query: 451  DGYCNKNNEEALLKLLDEFVSRGLCVD--------------------------------- 477
               C   + +   KL D+ V+ G+ +D                                 
Sbjct: 884  KRMCRVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKI 943

Query: 478  --VSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDI 535
               S +  L+  FCKK+    A  L  LM+   +  D V Y  L  A    G+     D 
Sbjct: 944  PTTSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCANGDVITALDF 1003

Query: 536  LDDMYRRRLMITLKIYRSFSASYAKDNEIL--DLFWSHVVDRGLMSKHI 582
             +++ ++ L+  +  YR   ++ +  + +   ++    + DRGL+S ++
Sbjct: 1004 YEEIKQKGLLPNMTTYRVLVSAISTKHYVSRGEIVLKDLNDRGLVSGYL 1052



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 45/223 (20%), Positives = 87/223 (39%), Gaps = 2/223 (0%)

Query: 336 PGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKV 395
           P V  ++ ++R   ++G +  A    + M  +   P   TCN ++ +  K          
Sbjct: 105 PAV--FDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWXF 162

Query: 396 KNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCN 455
             +ML + +  +  ++  LI   C   ++  A  +L  M   G+ P+  SY+ L+   C 
Sbjct: 163 FKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCK 222

Query: 456 KNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVI 515
           K   +  L L+     +G+  DV  Y   I   C+  +      +   M+   I  + V 
Sbjct: 223 KGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVS 282

Query: 516 YTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASY 558
           Y +L   + + G+    + + ++M    L   L  Y      Y
Sbjct: 283 YNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGY 325


>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 906

 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 135/545 (24%), Positives = 250/545 (45%), Gaps = 28/545 (5%)

Query: 12  KFIKTISAIMLKGHWAKLLNPNIASSLT---STAIHKVLLNLYNCCHIPSLSCAFFKWAE 68
           K +  +  ++  G W     P++  +L      +  +V++ +       +++  +F+W E
Sbjct: 69  KTVYDLCGVLENGLWG----PDVEEALNVFDEMSQPEVIVGVMKRLKDVNVAFQYFRWVE 124

Query: 69  SAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDG 128
                  H  + +   + ++ + ++    + +LE++++  F                   
Sbjct: 125 RKTQQ-AHCPEVYNAFLMVMARTRNLDYLEQILEEMSVAGF-----------------GL 166

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           ++HV   LV  +      ++   V + MR     P   A T L+ +L+     D +  ++
Sbjct: 167 SNHVSVELVASFVKSHKLKEAFGVIEMMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLF 226

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
            +M ++G  AN+HL+  L+    +   +D    LL EM+     ADL  YN  I  + K 
Sbjct: 227 HQMQEIGYEANVHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKV 286

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR--DIKGATPNHVTY 306
           G    A      M+ +G+ PD VTY +LI   C+  R+ EA  LF   D+  + P    Y
Sbjct: 287 GKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAY 346

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
            T+I GY  A   +EA  L E    KG  P V+ YN IL  L ++G++ +A R+ +EM +
Sbjct: 347 NTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQ 406

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
              AP+  T N LI+  CK G+  +A+KV++ M EAGL  +  T   +I   CKA+++D 
Sbjct: 407 DA-APNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDE 465

Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
           A  +  G+     SP   ++  L+DG   +   +    L ++ +      +V VY +LI+
Sbjct: 466 ACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQ 525

Query: 487 RFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMI 546
            F K  + +   +++  M   G   D ++  S     ++AGE +    + +++  + L+ 
Sbjct: 526 NFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVP 585

Query: 547 TLKIY 551
            ++ Y
Sbjct: 586 DVRSY 590



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 127/512 (24%), Positives = 231/512 (45%), Gaps = 19/512 (3%)

Query: 68  ESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLE---KIALRDFLSTPSVLNALVKIHD 124
           E +V  +  S      ++    K+   K A  ++E   K   R   S  + L   +   +
Sbjct: 158 EMSVAGFGLSNHVSVELVASFVKSHKLKEAFGVIEMMRKFKFRPAFSAYTTLIGALSAAN 217

Query: 125 DPD---------------GNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACT 169
            PD                N H+ + LV  +A        L + D+M+ ++    L    
Sbjct: 218 RPDPMLTLFHQMQEIGYEANVHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYN 277

Query: 170 VLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFK 229
           V ++   K    DM WK + +M   G+V +   Y  LI   CK+  +D+  +L  E++  
Sbjct: 278 VCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLN 337

Query: 230 DVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA 289
                ++ YNT+I  Y   G   EA ++ +R +R+G  P ++ YN ++    R+G++ EA
Sbjct: 338 RSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEA 397

Query: 290 RRLFRDIK-GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
            R+  +++  A PN  TY  LID  C+A +LE AL++++ M   G++P ++T N ++ +L
Sbjct: 398 LRIHDEMRQDAAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRL 457

Query: 349 CKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ 408
           CK  ++ +A  +   ++ K  +PD+ T  +LI+   + G    A  +  +ML++  + + 
Sbjct: 458 CKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNV 517

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
             Y +LI  F K    +   ++   M+  G SP     +  +D        E    L +E
Sbjct: 518 VVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEE 577

Query: 469 FVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
             ++GL  DV  Y  LI    K        +LF  M+  G+  D + Y ++   + ++G+
Sbjct: 578 IKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGK 637

Query: 529 PKACSDILDDMYRRRLMITLKIYRSFSASYAK 560
                 +L++M  + L  T+  Y S     AK
Sbjct: 638 VDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAK 669



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 104/399 (26%), Positives = 199/399 (49%), Gaps = 3/399 (0%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           + +++F+++ ++  +P ++A   ++         D  + + ++  + G + ++  YN ++
Sbjct: 326 EAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCIL 385

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
               +   V++  ++  EM  +D   +L TYN LI + CK G    AL VQD M+  G+ 
Sbjct: 386 TCLGRKGKVEEALRIHDEMR-QDAAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLF 444

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFR--DIKGATPNHVTYTTLIDGYCRANDLEEALRL 325
           P+I+T N +I   C+  ++ EA  +F   D K  +P+  T+ +LIDG  R   +++A  L
Sbjct: 445 PNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSL 504

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
            E M      P VV Y S+++   K GR  D +++  EM  +  +PD +  N+ ++   K
Sbjct: 505 YEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFK 564

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            G+      +   +   GL+ D  +Y  LIHG  KA       +L + M + G      +
Sbjct: 565 AGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLA 624

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+ ++DG+C     +   +LL+E  ++GL   V  Y +++    K +++D A  LF   +
Sbjct: 625 YNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAK 684

Query: 506 GNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL 544
             G+  + VIY+SL   + + G       IL+++ ++ L
Sbjct: 685 SIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGL 723



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 96/359 (26%), Positives = 174/359 (48%), Gaps = 2/359 (0%)

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
           P       L++ L +    D  + +Y+KM+    + N+ +Y  LI    K    +   K+
Sbjct: 480 PDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKI 539

Query: 223 LCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR 282
             EM  +    DL   N+ +    K G   +  A+ + ++ +G+ PD+ +Y+ LIHG  +
Sbjct: 540 YKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVK 599

Query: 283 EGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVT 340
            G  RE  +LF ++K  G   + + Y T+IDG+C++  +++A +L E M  KG+ P VVT
Sbjct: 600 AGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVT 659

Query: 341 YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML 400
           Y S++  L K  R+ +A  L  E     +  + V  ++LI+ + K+G    A  +   ++
Sbjct: 660 YGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELM 719

Query: 401 EAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEE 460
           + GL  + +T+  L+    KA+E+D A+     M +   SP+  +YS +++G C      
Sbjct: 720 QKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFN 779

Query: 461 ALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
                  E   +GL  +   Y  +I    K   V  A+ LF+  + +G + DS  Y ++
Sbjct: 780 KAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSACYNAM 838



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 93/341 (27%), Positives = 168/341 (49%), Gaps = 2/341 (0%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D   ++++M   + +P++   T L+ +  K    +   K+YK+MV  G   ++ L N  +
Sbjct: 500 DAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYM 559

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
               K+ +V+K   L  E++ + +  D+ +Y+ LI    K G   E   +   M+ +G+ 
Sbjct: 560 DCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLH 619

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRL 325
            D++ YN++I GFC+ G++ +A +L  ++K  G  P  VTY +++DG  + + L+EA  L
Sbjct: 620 LDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYML 679

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
            E   + GV   VV Y+S++    K GRI +A  +L E+ +K + P++ T N L++A  K
Sbjct: 680 FEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVK 739

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
             +   A      M       +  TY  +I+G C  ++ + A      M   G  P+  +
Sbjct: 740 AEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNIT 799

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
           Y+ ++ G     N      L D F + G   D + Y A+I 
Sbjct: 800 YTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSACYNAMIE 840



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 102/429 (23%), Positives = 194/429 (45%), Gaps = 38/429 (8%)

Query: 146 TQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNV 205
            ++ L++ D+MR  +  P+L    +L++ L K    +   KV   M + G+  NI   N+
Sbjct: 394 VEEALRIHDEMR-QDAAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNI 452

Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
           +I   CK+  +D+   +   ++ K    D  T+ +LI    ++G   +A ++ ++M    
Sbjct: 453 MIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSD 512

Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEAL 323
             P++V Y SLI  F + GR  +  ++++++  +G +P+ +   + +D   +A ++E+  
Sbjct: 513 QIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGR 572

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
            L E + A+G+ P V +Y+ ++  L K G  R+  +L  EM E+ +  D +  NT+I+ +
Sbjct: 573 ALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGF 632

Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY 443
           CK G    A ++   M   GL     TY +++ G  K   +D A  L       G   + 
Sbjct: 633 CKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNV 692

Query: 444 CSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQ----- 498
             YS L+DG+      +    +L+E + +GL  +   +  L+    K E++D AQ     
Sbjct: 693 VIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQN 752

Query: 499 -----------------------RLFNL-------MQGNGILGDSVIYTSLAYAYWRAGE 528
                                  R FN        MQ  G+  +++ YT++     +AG 
Sbjct: 753 MKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGN 812

Query: 529 PKACSDILD 537
                 + D
Sbjct: 813 VMEARGLFD 821



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 90/338 (26%), Positives = 161/338 (47%), Gaps = 2/338 (0%)

Query: 122 IHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLT 181
           +  D   N  V + L+  +      +DG +++ +M      P L      ++ + K    
Sbjct: 509 LDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEV 568

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
           +    +++++   G+V ++  Y++LIH   K+    +  KL  EM+ + +  D+  YNT+
Sbjct: 569 EKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTV 628

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GA 299
           I  +CK G   +A  + + M+ +G+ P +VTY S++ G  +  R+ EA  LF + K  G 
Sbjct: 629 IDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGV 688

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
             N V Y++LIDG+ +   ++EA  + E +  KG+ P   T+N +L  L K   I +A  
Sbjct: 689 DLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQV 748

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
               M   K +P+ +T + +IN  C I     A      M + GL  +  TY  +I G  
Sbjct: 749 CFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLA 808

Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKN 457
           KA  +  A+ L      +G  P    Y+ +++G  + N
Sbjct: 809 KAGNVMEARGLFDRFKASGGVPDSACYNAMIEGLSSAN 846



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 63/263 (23%), Positives = 113/263 (42%), Gaps = 20/263 (7%)

Query: 80  SHWTMIHILTKNKHFKSAQNMLEKIALRDFLST----PSVLNALVKIH--DDP------- 126
           ++ T+I    K+     A  +LE++  +    T     SV++ L KI   D+        
Sbjct: 624 AYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEA 683

Query: 127 -----DGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLT 181
                D N  + S L+  +  +    +   + +++    L P+ +    LL++L K    
Sbjct: 684 KSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEI 743

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
           D     ++ M  L    N   Y+++I+  C     +K      EM+ + ++ +  TY T+
Sbjct: 744 DEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTM 803

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGA 299
           IA   K G   EA  + DR +  G  PD   YN++I G     +  +A  +F +  +KG 
Sbjct: 804 IAGLAKAGNVMEARGLFDRFKASGGVPDSACYNAMIEGLSSANKAMDAYIVFEETRLKGC 863

Query: 300 TPNHVTYTTLIDGYCRANDLEEA 322
             N  T   L+D   +A+ LE+A
Sbjct: 864 RVNSKTCVVLLDALHKADCLEQA 886



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 50/220 (22%), Positives = 86/220 (39%)

Query: 340 TYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRM 399
            YN+ L  + +   +    ++L EM+       N     L+ ++ K      A  V   M
Sbjct: 135 VYNAFLMVMARTRNLDYLEQILEEMSVAGFGLSNHVSVELVASFVKSHKLKEAFGVIEMM 194

Query: 400 LEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNE 459
            +         Y  LI     A   D    L   M + G+  +   ++ LV  +  +   
Sbjct: 195 RKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFAREGRI 254

Query: 460 EALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
           +A L LLDE  S     D+ +Y   I  F K  KVD A + F+ M+  G++ D V YT+L
Sbjct: 255 DAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTL 314

Query: 520 AYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYA 559
                +A       ++ +++   R +  +  Y +    Y 
Sbjct: 315 IGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYG 354


>gi|125569916|gb|EAZ11431.1| hypothetical protein OsJ_01299 [Oryza sativa Japonica Group]
          Length = 563

 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 119/420 (28%), Positives = 208/420 (49%), Gaps = 8/420 (1%)

Query: 167 ACTVLLNSLA-KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCE 225
            CTV++ SL  K R  D V + +++M++ G   N+  Y   I   CK   V +   +L E
Sbjct: 110 TCTVVVRSLCEKGRFKD-VSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEE 168

Query: 226 MEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRM-EREGISPDIVTYNSLIHGFCREG 284
           M  + ++ +++T+ TLI   CK G    A  +  ++ +     P++ TY  +I G+CREG
Sbjct: 169 MVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREG 228

Query: 285 RMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYN 342
           ++  A  L   +  +G  PN  TYTTLI G+C+    + A  L   M  +G  P + TYN
Sbjct: 229 KLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYN 288

Query: 343 SILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEA 402
           +++   CK+G+I++A ++L     + +  D +T   LI  +CK G    A+ + +RM+E 
Sbjct: 289 AVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVEN 348

Query: 403 GLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEAL 462
           G   D   Y +LI  +C+ ++M+ +++     L  G  P+  +Y+ ++ GYC        
Sbjct: 349 GCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLA 408

Query: 463 LKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYA 522
           L++ +  V  G   D   Y ALI   CK+ +++ A+ L+  M    ++   V   +L + 
Sbjct: 409 LRVFERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFE 468

Query: 523 YWRAGEPKACSDILDDMYRRRLMITLK-IYRSFSASYAKDNEILDLFWSHVVDRGLMSKH 581
           Y R  +      +LD + +R+ + T+  + R  SA    D +   LF   V+D      H
Sbjct: 469 YCRREKTSIAVSVLDRLDKRQQVHTVDVVVRKLSA--LGDVDAASLFLKKVLDEDYAVDH 526



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 102/357 (28%), Positives = 174/357 (48%), Gaps = 3/357 (0%)

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
           KV+  M + GV      +  L+  CC+   V++V+ LL  M       D  T   ++   
Sbjct: 59  KVFDGMTRAGVSPMNRGFGALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSL 118

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNH 303
           C+KG   +      RM   G  P++V Y + I G C+   +++A  +  ++  +G  PN 
Sbjct: 119 CEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNV 178

Query: 304 VTYTTLIDGYCRANDLEEALRL-REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLN 362
            T+TTLIDG C+    E A RL  +++ +    P V TY  ++   C+EG++  A  LL 
Sbjct: 179 YTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLV 238

Query: 363 EMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAK 422
            M E+ + P+  T  TLI  +CK G    A ++ N+M + G + + +TY A+I GFCK  
Sbjct: 239 RMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKG 298

Query: 423 EMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYR 482
           ++  A ++L      G      +Y+ L+  +C + +    L L D  V  G C D+  Y 
Sbjct: 299 KIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYT 358

Query: 483 ALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
           +LI  +C++ +++ +Q+ F+     G+L     YTS+   Y + G       + + M
Sbjct: 359 SLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERM 415



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 97/364 (26%), Positives = 167/364 (45%), Gaps = 38/364 (10%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           +D  + F +M      P++   T  ++ L K R     + V ++MV  G+  N++ +  L
Sbjct: 125 KDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTL 184

Query: 207 IHACCK------------------------------------SSDVDKVEKLLCEMEFKD 230
           I   CK                                       + + E LL  M  + 
Sbjct: 185 IDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQG 244

Query: 231 VRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREAR 290
           ++ +  TY TLI  +CK G    A  + ++M++EG  P+I TYN++I GFC++G+++EA 
Sbjct: 245 LKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAY 304

Query: 291 RLFR--DIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
           ++ R    +G   + +TYT LI  +C+   +  AL L + M   G  P +  Y S++   
Sbjct: 305 KVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTY 364

Query: 349 CKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ 408
           C++ ++ ++ +  ++     + P   T  ++I  YCK+G +  A++V  RM++ G   D 
Sbjct: 365 CQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADS 424

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
            TY ALI G CK   ++ AK L  GMLD    P   +   L   YC +      + +LD 
Sbjct: 425 ITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVSVLDR 484

Query: 469 FVSR 472
              R
Sbjct: 485 LDKR 488



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 113/431 (26%), Positives = 198/431 (45%), Gaps = 28/431 (6%)

Query: 63  FFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALR----DFLSTPSVLNA 118
           F +  E+  P    ++ ++   I  L K ++ K A ++LE++  R    +  +  ++++ 
Sbjct: 131 FRRMLETGTPP---NVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDG 187

Query: 119 LVKI---------------HDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMP 163
           L KI                     N H  + ++  Y           +  +M    L P
Sbjct: 188 LCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKP 247

Query: 164 HLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLL 223
           + +  T L+    K    D  +++  KM Q G + NI+ YN +I   CK   + +  K+L
Sbjct: 248 NTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVL 307

Query: 224 CEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCRE 283
                + ++ D  TY  LI  +CK+G    AL + DRM   G  PDI  Y SLI  +C++
Sbjct: 308 RMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQ 367

Query: 284 GRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTY 341
            +M E+++ F    + G  P   TYT++I GYC+      ALR+ E M   G +   +TY
Sbjct: 368 RQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITY 427

Query: 342 NSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLE 401
            +++  LCKE R+ +A  L   M +K++ P  VT  TL   YC+   T+ A+ V +R+ +
Sbjct: 428 GALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVSVLDRLDK 487

Query: 402 AGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEA 461
              +    T   ++       ++D A   L  +LD  ++  + +Y+  ++  C +NN  A
Sbjct: 488 RQQV---HTVDVVVRKLSALGDVDAASLFLKKVLDEDYAVDHATYTGFINS-CYENNRYA 543

Query: 462 LLKLLDEFVSR 472
           L   + E  S+
Sbjct: 544 LASEMSEKFSK 554



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 114/388 (29%), Positives = 166/388 (42%), Gaps = 50/388 (12%)

Query: 237 TYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRL---- 292
           T N ++ +  + G    A  V D M R G+SP    + +L+   CREG++ E   L    
Sbjct: 40  TANWVLRVGLETGSFVYARKVFDGMTRAGVSPMNRGFGALVVVCCREGKVEEVDALLAAM 99

Query: 293 ------------------------FRDIK---------GATPNHVTYTTLIDGYCRANDL 319
                                   F+D+          G  PN V YT  IDG C+   +
Sbjct: 100 WRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYV 159

Query: 320 EEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRL-LNEMNEKKIAPDNVTCNT 378
           ++A  + E M  +G+ P V T+ +++  LCK G    A RL L  +      P+  T   
Sbjct: 160 KQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTV 219

Query: 379 LINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAG 438
           +I  YC+ G  A A  +  RM+E GL  +  TY  LI G CK    D A EL+  M   G
Sbjct: 220 MIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEG 279

Query: 439 FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQ 498
           F P+  +Y+ ++DG+C K   +   K+L    S+GL  D   Y  LI   CK+  + YA 
Sbjct: 280 FLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYAL 339

Query: 499 RLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASY 558
            LF+ M  NG   D   YTSL   Y +  + +      D      L+ T + Y S  A Y
Sbjct: 340 DLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGY 399

Query: 559 AKDNEILDLFWSHVVDRGLMSKHIFKEM 586
            K            V R  ++  +F+ M
Sbjct: 400 CK------------VGRSTLALRVFERM 415



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 89/352 (25%), Positives = 148/352 (42%), Gaps = 24/352 (6%)

Query: 34  IASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKH 93
           I SS     +H   + +   C    L+ A            K +  ++ T+I    K   
Sbjct: 205 IKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGS 264

Query: 94  FKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKM-TQDGLQV 152
           F  A  ++ K+    FL      NA++      DG       +   Y  L+M T  GL+ 
Sbjct: 265 FDRAFELMNKMKQEGFLPNIYTYNAVI------DGFCKK-GKIQEAYKVLRMATSQGLK- 316

Query: 153 FDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCK 212
           FD++            T+L+    K         ++ +MV+ G   +I  Y  LI   C+
Sbjct: 317 FDKITY----------TILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQ 366

Query: 213 SSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVT 272
              +++ +K   +     +     TY ++IA YCK G    AL V +RM + G   D +T
Sbjct: 367 QRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSIT 426

Query: 273 YNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMA 330
           Y +LI G C+E R+ EA+ L+  +  K   P  VT  TL   YCR      A+ + + + 
Sbjct: 427 YGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVSVLDRLD 486

Query: 331 AKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            +     V T + ++RKL   G +  A+  L ++ ++  A D+ T    IN+
Sbjct: 487 KR---QQVHTVDVVVRKLSALGDVDAASLFLKKVLDEDYAVDHATYTGFINS 535



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 61/261 (23%), Positives = 102/261 (39%), Gaps = 1/261 (0%)

Query: 303 HVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLN 362
           H     ++  +  A  L EA  +   M + G+   V T N +LR   + G    A ++ +
Sbjct: 3   HEVMRGMVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFD 62

Query: 363 EMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAK 422
            M    ++P N     L+   C+ G       +   M   G  LD  T   ++   C+  
Sbjct: 63  GMTRAGVSPMNRGFGALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKG 122

Query: 423 EMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYR 482
                 E    ML+ G  P+  +Y+  +DG C +   +    +L+E V RGL  +V  + 
Sbjct: 123 RFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHT 182

Query: 483 ALIRRFCKKEKVDYAQRLF-NLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
            LI   CK    + A RLF  L++ +    +   YT +   Y R G+      +L  M  
Sbjct: 183 TLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVE 242

Query: 542 RRLMITLKIYRSFSASYAKDN 562
           + L      Y +    + K  
Sbjct: 243 QGLKPNTNTYTTLIGGHCKGG 263


>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 807

 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 126/440 (28%), Positives = 212/440 (48%), Gaps = 5/440 (1%)

Query: 132 VLSWLVIFYANLKMTQDGLQV-FDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKK 190
           V+S L+    + K T + + V F +M     +P   + + +L S+  D  +     + + 
Sbjct: 140 VVSSLLRGLCDAKRTDEAVDVLFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRM 199

Query: 191 MVQLG--VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
            V+ G     N+ +Y+ ++H   K   V +   L  EM  + V  ++ TYN++I   CK 
Sbjct: 200 AVKQGGGCPCNVVVYSTVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKA 259

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTY 306
               +A  +  +M   G+ PD VTYN+LIHG+   G+ ++A R+F+++  +G  PN VT 
Sbjct: 260 RAVDKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTC 319

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
           +T +   C+   +EEA    + M AKG    +++Y+++L      G + D + L N M  
Sbjct: 320 STFVAFLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVR 379

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
             I P+    N L+N Y K G    AM +   M + GL  D  TY A+IH FC+   MD 
Sbjct: 380 DGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDD 439

Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
           A +    M+D G  P++  Y  L+ G+C   +     +L+ E  ++GL   +  + +LI 
Sbjct: 440 AMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLIN 499

Query: 487 RFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMI 546
             CK+ +V  AQR+F+++   G   D  I+TSL   Y   G+      + D M    +  
Sbjct: 500 HLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEP 559

Query: 547 TLKIYRSFSASYAKDNEILD 566
            +  Y +      K+  I D
Sbjct: 560 DIVTYGTLVNGCCKNGRIDD 579



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 123/504 (24%), Positives = 231/504 (45%), Gaps = 22/504 (4%)

Query: 63  FFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKI 122
           F +  +  VP    ++ ++ ++IH L K +    AQ +L ++          V N +   
Sbjct: 234 FHEMTQQGVPP---NVVTYNSVIHALCKARAVDKAQGILRQM----------VGNGV--- 277

Query: 123 HDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTD 182
              PD  ++  + L+  Y+ L   +  +++F +M    ++P+   C+  +  L K    +
Sbjct: 278 --QPDNVTY--NTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIE 333

Query: 183 MVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLI 242
              + +  M+  G   NI  Y+ L+H    +  +  +  L   M    +  +   +N L+
Sbjct: 334 EAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILV 393

Query: 243 ALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGAT 300
             Y K GM  EA+ + + M++ G++PD++TY ++IH FCR G M +A   F  +  KG  
Sbjct: 394 NGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVE 453

Query: 301 PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRL 360
           PN   Y  LI G+C   DL +A  L   +  KG+ P ++++ S++  LCKEGR+ +A R+
Sbjct: 454 PNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRI 513

Query: 361 LNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCK 420
            + +       D     +LI+ YC IG  + A +V + M+  G+  D  TY  L++G CK
Sbjct: 514 FDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCK 573

Query: 421 AKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSV 480
              +D    L   +L  G  P+  +Y  ++DG  +     A  ++  E +  G+ V +  
Sbjct: 574 NGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPT 633

Query: 481 YRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMY 540
           Y  L+   C+    + A  +F  +    +  D VI   +    ++A   +    +   + 
Sbjct: 634 YSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAEGLFASIP 693

Query: 541 RRRLMITLKIYRSFSASYAKDNEI 564
              L+ T++ Y     +  K+  +
Sbjct: 694 DYGLVPTVQTYTIMMENLIKEGSV 717



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 112/431 (25%), Positives = 196/431 (45%), Gaps = 37/431 (8%)

Query: 169 TVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEF 228
           + +++ L K+        ++ +M Q GV  N+  YN +IHA CK+  VDK + +L +M  
Sbjct: 215 STVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVG 274

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
             V+ D  TYNTLI  Y   G   +A+ +   M   G+ P+ VT ++ +   C+ GR+ E
Sbjct: 275 NGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEE 334

Query: 289 ARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILR 346
           AR  F  +  KG   N ++Y+TL+ GY  A  L +   L  +M   G+ P    +N ++ 
Sbjct: 335 AREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVN 394

Query: 347 KLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLML 406
              K G +R+A  +  +M ++ + PD +T   +I+A+C++G    AM   N M++ G+  
Sbjct: 395 GYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEP 454

Query: 407 DQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSY-------------------- 446
           +   Y+ LI GFC   ++  A+EL++ + + G  P   S+                    
Sbjct: 455 NFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIF 514

Query: 447 ---------------SWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
                          + L+DGYC         ++ D  VS G+  D+  Y  L+   CK 
Sbjct: 515 DMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKN 574

Query: 492 EKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIY 551
            ++D    LF  +   G+   +  Y  +    + AG   A  ++  +M    + +T+  Y
Sbjct: 575 GRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTY 634

Query: 552 RSFSASYAKDN 562
                   ++N
Sbjct: 635 SILLTGLCRNN 645



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 99/372 (26%), Positives = 185/372 (49%), Gaps = 5/372 (1%)

Query: 162 MPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDK-VE 220
           +P ++  ++L++   + R  D+ +  +  +++ G+ A++ + + L+   C +   D+ V+
Sbjct: 100 LPTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAVD 159

Query: 221 KLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAV-QDRMEREGISP-DIVTYNSLIH 278
            L   M       D  +Y+T++   C  G    AL + +  +++ G  P ++V Y++++H
Sbjct: 160 VLFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTVVH 219

Query: 279 GFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYP 336
           G  +EG++ EA  LF ++  +G  PN VTY ++I   C+A  +++A  +   M   GV P
Sbjct: 220 GLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQP 279

Query: 337 GVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVK 396
             VTYN+++      G+ + A R+  EM  + + P+ VTC+T +   CK G    A +  
Sbjct: 280 DNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFF 339

Query: 397 NRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNK 456
           + ML  G  L+  +Y  L+HG+  A  +     L   M+  G  P+   ++ LV+GY   
Sbjct: 340 DSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKC 399

Query: 457 NNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIY 516
                 + + ++   RGL  DV  Y A+I  FC+   +D A   FN M   G+  +  +Y
Sbjct: 400 GMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVY 459

Query: 517 TSLAYAYWRAGE 528
             L   +   G+
Sbjct: 460 QCLIQGFCTHGD 471



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 102/391 (26%), Positives = 175/391 (44%), Gaps = 2/391 (0%)

Query: 122 IHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLT 181
           + D    N HV + LV  YA   M ++ + +F+ M+   L P +     ++++  +    
Sbjct: 378 VRDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSM 437

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
           D     +  M+  GV  N  +Y  LI   C   D+ K E+L+ E+  K +   + ++ +L
Sbjct: 438 DDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASL 497

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GA 299
           I   CK+G  +EA  + D + R G   D+  + SLI G+C  G+M EA R+   +   G 
Sbjct: 498 INHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGI 557

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
            P+ VTY TL++G C+   +++ L L   +  KGV P   TY  IL  L   GR   A  
Sbjct: 558 EPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKE 617

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
           +  EM E  IA    T + L+   C+   T  A+ V  ++    +  D      +I    
Sbjct: 618 MFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMF 677

Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
           KA+  + A+ L   + D G  P+  +Y+ +++    + + E    +    +  GL     
Sbjct: 678 KARRREEAEGLFASIPDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFSVMLKSGLSPTSH 737

Query: 480 VYRALIRRFCKKEKVDYAQRLFNLMQGNGIL 510
               ++R   +K ++  A      + G  IL
Sbjct: 738 FINVIVRTLLEKGEIVKAGIYMCRVDGKSIL 768



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 76/330 (23%), Positives = 137/330 (41%), Gaps = 50/330 (15%)

Query: 299 ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDA- 357
           A P   TY+ LID  CRA  L+ A      +  +G+   V+  +S+LR LC   R  +A 
Sbjct: 99  ALPTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAV 158

Query: 358 NRLLNEMNEKKIAPDNVTCNTLINAYC--------------------------------- 384
           + L + M E    PD ++ +T++ + C                                 
Sbjct: 159 DVLFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTVV 218

Query: 385 ----KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFS 440
               K G    A  + + M + G+  +  TY ++IH  CKA+ +D A+ +L  M+  G  
Sbjct: 219 HGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQ 278

Query: 441 PSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRL 500
           P   +Y+ L+ GY      +  +++  E  SRG+  +       +   CK  +++ A+  
Sbjct: 279 PDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREF 338

Query: 501 FNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAK 560
           F+ M   G   + + Y++L + Y  AG     S++ + M R  ++    ++      YAK
Sbjct: 339 FDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAK 398

Query: 561 DNEILDLFWSHVVDRGLMSKHIFKEMQLRN 590
              + +  +            IF++MQ R 
Sbjct: 399 CGMVREAMF------------IFEDMQKRG 416



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 59/254 (23%), Positives = 96/254 (37%), Gaps = 41/254 (16%)

Query: 358 NRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHG 417
           NR+      +   P   T + LI+  C+      A      +L  G+  D     +L+ G
Sbjct: 88  NRMSTGTGPRVALPTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRG 147

Query: 418 FCKAKEMDIAKELLFG-MLDAGFSPSYCSYSWLVDGYCNKNNEE---------------- 460
            C AK  D A ++LF  M + G  P   SYS ++   C+    +                
Sbjct: 148 LCDAKRTDEAVDVLFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGC 207

Query: 461 ------------ALLK---------LLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQR 499
                        L K         L  E   +G+  +V  Y ++I   CK   VD AQ 
Sbjct: 208 PCNVVVYSTVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQG 267

Query: 500 LFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM---ITLKIYRSFSA 556
           +   M GNG+  D+V Y +L + Y   G+ K    +  +M  R ++   +T   + +F  
Sbjct: 268 ILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLC 327

Query: 557 SYAKDNEILDLFWS 570
            + +  E  + F S
Sbjct: 328 KHGRIEEAREFFDS 341


>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 550

 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 114/375 (30%), Positives = 187/375 (49%), Gaps = 2/375 (0%)

Query: 155 QMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSS 214
           +M V  +   L+   +++N         +   V  KM++LG   +      L++  C+ +
Sbjct: 110 KMEVLGIRNDLYTFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRN 169

Query: 215 DVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYN 274
            V     L+ +M     R D+  YN +I   CK     +AL     + R+GI P++VTY 
Sbjct: 170 RVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYT 229

Query: 275 SLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAK 332
           +L++G C  GR  +A RL RD+  +  TPN +TY+ L+D + +   + EA  + E M   
Sbjct: 230 ALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRM 289

Query: 333 GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
            + P +VTY+S++  LC   RI +AN++ + M  K   PD V+ NTLIN +CK       
Sbjct: 290 SIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDG 349

Query: 393 MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
           MK+  +M + GL+ +  TY  LI GF +  ++D A+E    M   G SP   +Y+ L+ G
Sbjct: 350 MKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGG 409

Query: 453 YCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGD 512
            C+    E  L + ++     + +D+  Y  +I+  CK  KV+ A  LF  +   G+  D
Sbjct: 410 LCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPD 469

Query: 513 SVIYTSLAYAYWRAG 527
            V YT++       G
Sbjct: 470 IVTYTTMMSGLCTKG 484



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 108/383 (28%), Positives = 191/383 (49%), Gaps = 2/383 (0%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D + +F +M      P +     LL+++ K +  D+V  + KKM  LG+  +++ +N++I
Sbjct: 68  DAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIVI 127

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           +  C    V     +L +M       D  T  +L+  +C++    +A+++ D+M   G  
Sbjct: 128 NCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYR 187

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
           PDIV YN++I   C+  R+ +A   F++I  KG  PN VTYT L++G C +    +A RL
Sbjct: 188 PDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARL 247

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
              M  + + P V+TY+++L    K G++ +A  +  EM    I PD VT ++LIN  C 
Sbjct: 248 LRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCL 307

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
                 A ++ + M+  G   D  +Y  LI+GFCKAK ++   +L   M   G   +  +
Sbjct: 308 HDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVT 367

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+ L+ G+    + +   +   +  S G+  D+  Y  L+   C    ++ A  +F  MQ
Sbjct: 368 YNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQ 427

Query: 506 GNGILGDSVIYTSLAYAYWRAGE 528
            + +  D V YT++     + G+
Sbjct: 428 KSEMDLDIVTYTTVIQGMCKTGK 450



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 102/363 (28%), Positives = 183/363 (50%), Gaps = 4/363 (1%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           SVL  ++K+  +PD     +  LV  +       D + + D+M      P + A   +++
Sbjct: 141 SVLGKMLKLGYEPD--RVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIID 198

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
           SL K R  +     +K++ + G+  N+  Y  L++  C S   +   +LL +M  + +  
Sbjct: 199 SLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITP 258

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           ++ TY+ L+  + K G   EA  + + M R  I PDIVTY+SLI+G C   R+ EA ++F
Sbjct: 259 NVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMF 318

Query: 294 RDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
             +  KG  P+ V+Y TLI+G+C+A  +E+ ++L   M+ +G+    VTYN++++   + 
Sbjct: 319 DLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQV 378

Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
           G +  A    ++M+   ++PD  T N L+   C  G    A+ +   M ++ + LD  TY
Sbjct: 379 GDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTY 438

Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
             +I G CK  +++ A  L   +   G  P   +Y+ ++ G C K  +  +  L  +   
Sbjct: 439 TTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVEALYTKMKQ 498

Query: 472 RGL 474
            GL
Sbjct: 499 EGL 501



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 98/364 (26%), Positives = 184/364 (50%), Gaps = 4/364 (1%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAK-DRLTDMVWKVYKKMVQLGVVANIHLYNVLIH 208
           L V  +M      P       L+N   + +R++D V  V  KMV++G   +I  YN +I 
Sbjct: 140 LSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLV-DKMVEIGYRPDIVAYNAIID 198

Query: 209 ACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISP 268
           + CK+  V+       E+  K +R ++ TY  L+   C  G   +A  +   M +  I+P
Sbjct: 199 SLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITP 258

Query: 269 DIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLR 326
           +++TY++L+  F + G++ EA+ +F ++      P+ VTY++LI+G C  + ++EA ++ 
Sbjct: 259 NVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMF 318

Query: 327 EVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKI 386
           ++M +KG +P VV+YN+++   CK  R+ D  +L  +M+++ +  + VT NTLI  + ++
Sbjct: 319 DLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQV 378

Query: 387 GDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSY 446
           GD   A +  ++M   G+  D +TY  L+ G C    ++ A  +   M  +       +Y
Sbjct: 379 GDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTY 438

Query: 447 SWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQG 506
           + ++ G C     E    L      +GL  D+  Y  ++   C K      + L+  M+ 
Sbjct: 439 TTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVEALYTKMKQ 498

Query: 507 NGIL 510
            G++
Sbjct: 499 EGLM 502



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 100/354 (28%), Positives = 171/354 (48%), Gaps = 18/354 (5%)

Query: 238 YNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK 297
           +N L++   K   +   +++  +ME  GI  D+ T+N +I+ FC   ++  A  +   + 
Sbjct: 88  FNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSVLGKML 147

Query: 298 --GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIR 355
             G  P+ VT  +L++G+CR N + +A+ L + M   G  P +V YN+I+  LCK  R+ 
Sbjct: 148 KLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVN 207

Query: 356 DANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALI 415
           DA     E+  K I P+ VT   L+N  C  G    A ++   M++  +  +  TY AL+
Sbjct: 208 DALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALL 267

Query: 416 HGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLC 475
             F K  ++  AKE+   M+     P   +YS L++G C  +  +   ++ D  VS+G  
Sbjct: 268 DAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCF 327

Query: 476 VDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDI 535
            DV  Y  LI  FCK ++V+   +LF  M   G++ ++V Y +L   +++ G+     + 
Sbjct: 328 PDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEF 387

Query: 536 LDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKH--IFKEMQ 587
              M             SF  S   D    ++    + D GL+ K   IF++MQ
Sbjct: 388 FSQM------------DSFGVS--PDIWTYNILLGGLCDNGLLEKALVIFEDMQ 427



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 85/301 (28%), Positives = 139/301 (46%), Gaps = 40/301 (13%)

Query: 63  FFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSV------L 116
           FFK  E      + ++ ++  +++ L  +  +  A  +L  +  R    TP+V      L
Sbjct: 212 FFK--EIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKI--TPNVITYSALL 267

Query: 117 NALVKIHDDPDGNSHVLSWLVIFYANLKMTQD-----------GL----------QVFDQ 155
           +A VK       N  VL    IF   ++M+ D           GL          Q+FD 
Sbjct: 268 DAFVK-------NGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDL 320

Query: 156 MRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSD 215
           M      P + +   L+N   K +  +   K+++KM Q G+V N   YN LI    +  D
Sbjct: 321 MVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGD 380

Query: 216 VDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNS 275
           VDK ++   +M+   V  D++TYN L+   C  G+  +AL + + M++  +  DIVTY +
Sbjct: 381 VDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTT 440

Query: 276 LIHGFCREGRMREARRLF--RDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKG 333
           +I G C+ G++ +A  LF    +KG  P+ VTYTT++ G C      E   L   M  +G
Sbjct: 441 VIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVEALYTKMKQEG 500

Query: 334 V 334
           +
Sbjct: 501 L 501



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 61/234 (26%), Positives = 111/234 (47%), Gaps = 12/234 (5%)

Query: 353 RIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYK 412
           ++ DA  L  EM + +  P  V  N L++A  K+      + +  +M   G+  D +T+ 
Sbjct: 65  KLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFN 124

Query: 413 ALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSR 472
            +I+ FC   ++ +A  +L  ML  G+ P   +   LV+G+C +N     + L+D+ V  
Sbjct: 125 IVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184

Query: 473 GLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKAC 532
           G   D+  Y A+I   CK  +V+ A   F  +   GI  + V YT+L      +G     
Sbjct: 185 GYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDA 244

Query: 533 SDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKEM 586
           + +L DM +R++   +  Y +   ++ K+ ++L+            +K IF+EM
Sbjct: 245 ARLLRDMIKRKITPNVITYSALLDAFVKNGKVLE------------AKEIFEEM 286



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/236 (25%), Positives = 106/236 (44%)

Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT 378
           L +A+ L   M     +P +V +N +L  + K  +      L  +M    I  D  T N 
Sbjct: 66  LHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNI 125

Query: 379 LINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAG 438
           +IN +C     + A+ V  +ML+ G   D+ T  +L++GFC+   +  A  L+  M++ G
Sbjct: 126 VINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185

Query: 439 FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQ 498
           + P   +Y+ ++D  C        L    E   +G+  +V  Y AL+   C   + + A 
Sbjct: 186 YRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAA 245

Query: 499 RLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSF 554
           RL   M    I  + + Y++L  A+ + G+     +I ++M R  +   +  Y S 
Sbjct: 246 RLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSL 301


>gi|302143409|emb|CBI21970.3| unnamed protein product [Vitis vinifera]
          Length = 375

 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 114/352 (32%), Positives = 182/352 (51%), Gaps = 5/352 (1%)

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
           P +   + LL S+ + +    V  +YK+M   G+  N +  N+LI++ C  + +     +
Sbjct: 8   PSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSV 67

Query: 223 LCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR 282
           L ++     +    T+ TLI   C +G   EAL + D+M  EG  PD++TY +LI+G C+
Sbjct: 68  LGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCK 127

Query: 283 EGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVT 340
           + ++ EA  LF D+  KG +PN+ TY++LI G C     +EA+RL   M  + + P  +T
Sbjct: 128 DRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLT 187

Query: 341 YNSILRKLCKEGRIR---DANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKN 397
           +N+++  LCKEG I+    A  L  EM+++ + PD VT NTLI+  C +G    A+ + +
Sbjct: 188 FNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFH 247

Query: 398 RMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKN 457
            M+  G + D  TY+ L    CK   +  A  LL  +      P    YS ++DG C   
Sbjct: 248 EMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAG 307

Query: 458 NEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGI 509
             EA   L  +  S+GL  DV  Y  +I   C++  +  A +LF  M  N I
Sbjct: 308 ELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENDI 359



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 103/342 (30%), Positives = 162/342 (47%), Gaps = 5/342 (1%)

Query: 203 YNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRME 262
           ++ L+ +  +      V  L  +M+   +  + +T N LI  +C       A +V   + 
Sbjct: 13  FSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSVLGDIL 72

Query: 263 REGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLE 320
           + G  P   T+ +LI G C EG++ EA +LF  +  +G  P+ +TY TLI+G C+   L 
Sbjct: 73  KLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKDRQLT 132

Query: 321 EALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLI 380
           EAL L   M AKG+ P   TY+S++  LC  G  ++A RL   M  +KI PD +T NTL+
Sbjct: 133 EALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLV 192

Query: 381 NAYCKIGDTA---SAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA 437
           +A CK G       AM +   M + GL+ D  TY  LIHG C    +  A  L   M+  
Sbjct: 193 DALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVY 252

Query: 438 GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYA 497
           G  P   +Y  L D  C  +     + LL       L  D+ +Y  ++   C+  +++ A
Sbjct: 253 GQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAA 312

Query: 498 QRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
           + LF+ +   G+  D   YT +     + G     S +  +M
Sbjct: 313 RDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEM 354



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 97/324 (29%), Positives = 159/324 (49%), Gaps = 5/324 (1%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           L ++ QM    +  + +   +L+NS          + V   +++LG   +   +  LI  
Sbjct: 30  LSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRG 89

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
            C    + +  +L  +M  +  + D+ TY TLI   CK     EAL++   M  +GISP+
Sbjct: 90  LCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKDRQLTEALSLFSDMLAKGISPN 149

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLE---EALR 324
             TY+SLIHG C  G  +EA RLF  +  +   P+ +T+ TL+D  C+   ++   +A+ 
Sbjct: 150 NFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMIQIMDKAMG 209

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           L E M+ +G+ P  VTYN+++  LC  GR+RDA  L +EM      PD VT   L +  C
Sbjct: 210 LFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLC 269

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           K    A AM +   +    L  D   Y  ++ G C+A E++ A++L   +   G  P   
Sbjct: 270 KNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVR 329

Query: 445 SYSWLVDGYCNKNNEEALLKLLDE 468
           +Y+ +++G C +       KL  E
Sbjct: 330 TYTIMINGLCQQGLLAEASKLFGE 353



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 94/307 (30%), Positives = 152/307 (49%), Gaps = 6/307 (1%)

Query: 251 HYEA-LAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYT 307
           HY   L++  +M+  GI  +  T N LI+ FC   R+  A  +  DI   G  P+  T+T
Sbjct: 25  HYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFT 84

Query: 308 TLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEK 367
           TLI G C    + EAL+L + M  +G  P V+TY +++  LCK+ ++ +A  L ++M  K
Sbjct: 85  TLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKDRQLTEALSLFSDMLAK 144

Query: 368 KIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKA---KEM 424
            I+P+N T ++LI+  C +G    A+++   M+   +M DQ T+  L+   CK    + M
Sbjct: 145 GISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMIQIM 204

Query: 425 DIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRAL 484
           D A  L   M   G  P   +Y+ L+ G C+       + L  E V  G   D+  YR L
Sbjct: 205 DKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRIL 264

Query: 485 IRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL 544
               CK  ++  A  L  +++G  +  D  IY+ +     RAGE +A  D+   +  + L
Sbjct: 265 FDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGL 324

Query: 545 MITLKIY 551
              ++ Y
Sbjct: 325 HPDVRTY 331



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 90/324 (27%), Positives = 151/324 (46%), Gaps = 6/324 (1%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N++ L+ L+  + +L        V   +      P     T L+  L  +       +++
Sbjct: 44  NTYTLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLF 103

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
            KM   G   ++  Y  LI+  CK   + +   L  +M  K +  + FTY++LI   C  
Sbjct: 104 DKMTGEGFQPDVLTYGTLINGLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCIL 163

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGR---MREARRLFRDI--KGATPNH 303
           G   EA+ +   M    I PD +T+N+L+   C+EG    M +A  LF ++  +G  P+ 
Sbjct: 164 GHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDT 223

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
           VTY TLI G C    L +A+ L   M   G  P +VTY  +   LCK  R+ +A  LL  
Sbjct: 224 VTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKV 283

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
           +    + PD    + +++  C+ G+  +A  + +++   GL  D  TY  +I+G C+   
Sbjct: 284 IEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGL 343

Query: 424 MDIAKELLFGMLDAGFSPSYCSYS 447
           +  A + LFG +D     SY ++S
Sbjct: 344 LAEASK-LFGEMDENDIESYSTFS 366



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/255 (25%), Positives = 111/255 (43%), Gaps = 3/255 (1%)

Query: 301 PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRL 360
           P+ V ++ L+    R       L L + M + G+     T N ++   C   R+  A  +
Sbjct: 8   PSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSV 67

Query: 361 LNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCK 420
           L ++ +    P   T  TLI   C  G    A+++ ++M   G   D  TY  LI+G CK
Sbjct: 68  LGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCK 127

Query: 421 AKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSV 480
            +++  A  L   ML  G SP+  +YS L+ G C   + +  ++L    + R +  D   
Sbjct: 128 DRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLT 187

Query: 481 YRALIRRFCKK---EKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILD 537
           +  L+   CK+   + +D A  LF  M   G++ D+V Y +L +     G  +    +  
Sbjct: 188 FNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFH 247

Query: 538 DMYRRRLMITLKIYR 552
           +M     +  L  YR
Sbjct: 248 EMVVYGQIPDLVTYR 262


>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 123/468 (26%), Positives = 232/468 (49%), Gaps = 28/468 (5%)

Query: 50  LYNC-CHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRD 108
           L NC CH+  ++  F   A+     Y     +  T+I  L      K A +  +K+  + 
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 159

Query: 109 F----LSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPH 164
           F    +S  +++N + KI D                     T+  ++   ++      P 
Sbjct: 160 FQLNQVSYATLINGVCKIGD---------------------TRAAIKFLRKIDGRLTKPD 198

Query: 165 LHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLC 224
           +     +++++ K +L    + ++ +M   G+ A++  YN LI+  C    + +   LL 
Sbjct: 199 VVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLN 258

Query: 225 EMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREG 284
           EM  K +  +++TYN L+   CK+G   EA +V   M +  + PD++TY++L+ G+    
Sbjct: 259 EMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVY 318

Query: 285 RMREARRLFR--DIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYN 342
            +++A+ +F    + G TP+  TYT LI+G+C+   ++EAL L + M  K + PG+VTY+
Sbjct: 319 EVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYS 378

Query: 343 SILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEA 402
           S++  LCK GRI     L++EM ++    D +T ++LI+  CK G    A+ + N+M + 
Sbjct: 379 SLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQ 438

Query: 403 GLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEAL 462
            +  + FT+  L+ G CK   +  A+E+   +L  G+  +  +Y+ +++G+C +   E  
Sbjct: 439 EIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEA 498

Query: 463 LKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGIL 510
           L +L +    G   +   +  +I    KK++ D A++L   M   G+L
Sbjct: 499 LTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGLL 546



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 109/377 (28%), Positives = 193/377 (51%), Gaps = 2/377 (0%)

Query: 171 LLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKD 230
           L+N + K   T    K  +K+       ++ +YN +I A CK   V +   L  EM  K 
Sbjct: 170 LINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKG 229

Query: 231 VRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREAR 290
           + AD+ TYNTLI  +C  G   EA+ + + M  + I+P++ TYN L+   C+EG+++EA+
Sbjct: 230 ISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAK 289

Query: 291 RLFRDIKGA--TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
            +   +  A   P+ +TY+TL+DGY    ++++A  +   M+  GV P V TY  ++   
Sbjct: 290 SVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGF 349

Query: 349 CKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ 408
           CK   + +A  L  EM++K + P  VT ++LI+  CK G  +    + + M + G   D 
Sbjct: 350 CKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADV 409

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
            TY +LI G CK   +D A  L   M D    P+  +++ L+DG C     +   ++  +
Sbjct: 410 ITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQD 469

Query: 469 FVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
            +++G  ++V  Y  +I   CK+  ++ A  + + M+ NG + ++  + ++  A ++  E
Sbjct: 470 LLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDE 529

Query: 529 PKACSDILDDMYRRRLM 545
                 +L  M  R L+
Sbjct: 530 NDKAEKLLRQMIARGLL 546



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 119/405 (29%), Positives = 189/405 (46%), Gaps = 2/405 (0%)

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
           +A +K     + +  ++ +  + P L    +L+N           + V  K+++ G   +
Sbjct: 69  FAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPD 128

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
               N LI   C    V K      ++  +  + +  +Y TLI   CK G    A+    
Sbjct: 129 TVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRAAIKFLR 188

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRAN 317
           +++     PD+V YN++I   C+   + EA  LF +  +KG + + VTY TLI G+C   
Sbjct: 189 KIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVG 248

Query: 318 DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCN 377
            L+EA+ L   M  K + P V TYN ++  LCKEG++++A  +L  M +  + PD +T +
Sbjct: 249 KLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYS 308

Query: 378 TLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA 437
           TL++ Y  + +   A  V N M   G+  D  TY  LI+GFCK K +D A  L   M   
Sbjct: 309 TLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQK 368

Query: 438 GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYA 497
              P   +YS L+DG C       +  L+DE   RG   DV  Y +LI   CK   +D A
Sbjct: 369 NMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRA 428

Query: 498 QRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRR 542
             LFN M+   I  +   +T L     + G  K   ++  D+  +
Sbjct: 429 IALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTK 473



 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 72/289 (24%), Positives = 120/289 (41%), Gaps = 12/289 (4%)

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
           TP  + +  ++D + +      A+ L   +  KG+ P ++T N ++   C  G+I     
Sbjct: 56  TPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFS 115

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
           +L ++ ++   PD VT NTLI   C  G    A+   +++L  G  L+Q +Y  LI+G C
Sbjct: 116 VLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVC 175

Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
           K  +   A + L  +      P    Y+ ++D  C          L  E   +G+  DV 
Sbjct: 176 KIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVV 235

Query: 480 VYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
            Y  LI  FC   K+  A  L N M    I  +   Y  L  A  + G+ K    +L  M
Sbjct: 236 TYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVM 295

Query: 540 YRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKEMQL 588
            +  +   +  Y +    Y         F  + V +   ++H+F  M L
Sbjct: 296 LKACVKPDVITYSTLMDGY---------FLVYEVKK---AQHVFNAMSL 332


>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
          Length = 644

 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 120/426 (28%), Positives = 207/426 (48%), Gaps = 5/426 (1%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D L+V D+M      P      V+L +  +        +V + M   G   +    N+++
Sbjct: 129 DALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVL 188

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           +A C+   VD+   LL ++ F    AD+ +YN ++   C      +   + D M R   +
Sbjct: 189 NAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCA 248

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRL 325
           P+IVT+N+LI   CR G       +   +   G TP+   Y T+IDG C+   LE A  +
Sbjct: 249 PNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEI 308

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
              M + G+ P VV YN++L+ LC   R ++A  LL+EM +K    D+VT N L++ +C+
Sbjct: 309 LNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQ 368

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            G     +++  +ML  G M D  TY  +I+GFCK   +D A  LL  M   G  P+  S
Sbjct: 369 NGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVS 428

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+ ++ G C+        +L+ + + +G   +   +  LI   CKK  V+ A  L   M 
Sbjct: 429 YTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQML 488

Query: 506 GNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKD---N 562
            NG   D + Y+++     +AG+ +   ++L+ M  + +     IY S + + +++   N
Sbjct: 489 VNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVN 548

Query: 563 EILDLF 568
           +++ +F
Sbjct: 549 KVIQMF 554



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 110/394 (27%), Positives = 193/394 (48%), Gaps = 2/394 (0%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           ++ D+M   +  P++     L+  L ++ L + V +V  +M + G   +I +Y  +I   
Sbjct: 237 ELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGI 296

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           CK   ++   ++L  M    ++ ++  YNT++   C      EA  +   M ++    D 
Sbjct: 297 CKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDD 356

Query: 271 VTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
           VT+N L+  FC+ G +     L   +   G  P+ +TYTT+I+G+C+   ++EA+ L + 
Sbjct: 357 VTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKS 416

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M++ G  P  V+Y  +L+ LC  GR  DA  L+++M ++   P+ VT NTLIN  CK G 
Sbjct: 417 MSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGL 476

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
              A+++  +ML  G   D  +Y  +I G  KA + + A ELL  M++ G SP+   YS 
Sbjct: 477 VEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSS 536

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG 508
           +      +     ++++ D      +  D  +Y A+I   CK+ + D A   F  M  NG
Sbjct: 537 IACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNG 596

Query: 509 ILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRR 542
            + +   YT L       G  K   ++L ++  R
Sbjct: 597 CMPNESTYTMLIKGLASEGLAKEAQELLSELCSR 630



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 117/440 (26%), Positives = 202/440 (45%), Gaps = 6/440 (1%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           ++ ++V + M           C ++LN++ +    D    + +K+   G  A+I  YN +
Sbjct: 163 RNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAV 222

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           +   C +     VE+L+ EM   D   ++ T+NTLI   C+ G+      V  +M   G 
Sbjct: 223 LKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGC 282

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALR 324
           +PDI  Y ++I G C+EG +  A  +   +   G  PN V Y T++ G C A   +EA  
Sbjct: 283 TPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEE 342

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           L   M  K      VT+N ++   C+ G +     LL +M      PD +T  T+IN +C
Sbjct: 343 LLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFC 402

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           K G    A+ +   M   G   +  +Y  ++ G C A     A+EL+  M+  G  P+  
Sbjct: 403 KEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPV 462

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
           +++ L++  C K   E  ++LL + +  G   D+  Y  +I    K  K + A  L N+M
Sbjct: 463 TFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVM 522

Query: 505 QGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAK---D 561
              GI  +++IY+S+A A  R G       + D++    +     +Y +  +S  K    
Sbjct: 523 VNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWET 582

Query: 562 NEILDLFWSHVVDRGLMSKH 581
           +  +D F++++V  G M   
Sbjct: 583 DRAID-FFAYMVSNGCMPNE 601



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 101/375 (26%), Positives = 176/375 (46%), Gaps = 42/375 (11%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           +V  QM  H   P +     +++ + K+   ++  ++  +M   G+  N+  YN ++   
Sbjct: 272 EVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGL 331

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           C +    + E+LL EM  KD   D  T+N L+  +C+ G+    + + ++M   G  PD+
Sbjct: 332 CSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDV 391

Query: 271 VTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREV 328
           +TY ++I+GFC+EG + EA  L + +   G  PN V+YT ++ G C A    +A  L   
Sbjct: 392 ITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQ 451

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M  +G  P  VT+N+++  LCK+G +  A  LL +M     +PD ++ +T+I+   K G 
Sbjct: 452 MIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGK 511

Query: 389 TASAMKVKNRMLEAGL-------------------------MLDQFT----------YKA 413
           T  A+++ N M+  G+                         M D             Y A
Sbjct: 512 TEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNA 571

Query: 414 LIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
           +I   CK  E D A +    M+  G  P+  +Y+ L+ G  ++   +   +LL E  SRG
Sbjct: 572 VISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631

Query: 474 LCVDVSVYRALIRRF 488
                ++ + L+R F
Sbjct: 632 -----ALRKHLMRHF 641



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 82/299 (27%), Positives = 140/299 (46%), Gaps = 2/299 (0%)

Query: 231 VRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREAR 290
           V  + +T+  ++   C +G   +AL V D M  +G +P    Y+ ++   CR G  R + 
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166

Query: 291 RLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
           R+   +  KG T +      +++  C    ++EA+ L   +A  G    +V+YN++L+ L
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226

Query: 349 CKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ 408
           C   R  D   L++EM     AP+ VT NTLI   C+ G      +V  +M E G   D 
Sbjct: 227 CMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDI 286

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
             Y  +I G CK   +++A E+L  M   G  P+   Y+ ++ G C+    +   +LL E
Sbjct: 287 RMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSE 346

Query: 469 FVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
              +   +D   +  L+  FC+   VD    L   M  +G + D + YT++   + + G
Sbjct: 347 MFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEG 405



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 72/273 (26%), Positives = 134/273 (49%), Gaps = 1/273 (0%)

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           +V YN+++ G+CR G++  ARRL   +    PN  T+  ++ G C    + +AL + + M
Sbjct: 79  VVAYNAMVAGYCRAGQLAAARRLAAAVP-VPPNAYTFFPVVRGLCTRGRIADALEVLDEM 137

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
           + KG  P    Y+ IL   C+ G  R++ R+L  M+ K    D   CN ++NA C+ G  
Sbjct: 138 SFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCV 197

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
             A+ +  ++   G   D  +Y A++ G C AK     +EL+  M+    +P+  +++ L
Sbjct: 198 DEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTL 257

Query: 450 VDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGI 509
           +   C     E + ++L +    G   D+ +Y  +I   CK+  ++ A  + N M   G+
Sbjct: 258 IGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGL 317

Query: 510 LGDSVIYTSLAYAYWRAGEPKACSDILDDMYRR 542
             + V Y ++      A   K   ++L +M+++
Sbjct: 318 KPNVVCYNTVLKGLCSAERWKEAEELLSEMFQK 350



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 87/372 (23%), Positives = 156/372 (41%), Gaps = 56/372 (15%)

Query: 71  VPNY--KHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDG 128
           +P+Y  K ++  + T++  L   + +K A+ +L ++  +D        N LV        
Sbjct: 312 MPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVD------- 364

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
                     F+    +    +++ +QM  H  MP +   T ++N   K+ L D    + 
Sbjct: 365 ----------FFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLL 414

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
           K M   G   N   Y +++   C +      E+L+ +M  +    +  T+NTLI   CKK
Sbjct: 415 KSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKK 474

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTY 306
           G+  +A+ +  +M   G SPD+++Y+++I G  + G+  EA  L   +  KG +PN    
Sbjct: 475 GLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPN---- 530

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
                                           + Y+SI   L +EGR+    ++ + + +
Sbjct: 531 -------------------------------TIIYSSIACALSREGRVNKVIQMFDNIKD 559

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
             I  D V  N +I++ CK  +T  A+     M+  G M ++ TY  LI G         
Sbjct: 560 TTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKE 619

Query: 427 AKELLFGMLDAG 438
           A+ELL  +   G
Sbjct: 620 AQELLSELCSRG 631



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 83/178 (46%), Gaps = 2/178 (1%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N    + L+ F     + +  +++  QM V+   P L + + +++ L K   T+   ++ 
Sbjct: 460 NPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELL 519

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
             MV  G+  N  +Y+ +  A  +   V+KV ++   ++   +R+D   YN +I+  CK+
Sbjct: 520 NVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKR 579

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHV 304
                A+     M   G  P+  TY  LI G   EG  +EA+ L  ++  +GA   H+
Sbjct: 580 WETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGALRKHL 637


>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
          Length = 644

 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 120/426 (28%), Positives = 207/426 (48%), Gaps = 5/426 (1%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D L+V D+M      P      V+L +  +        +V + M   G   +    N+++
Sbjct: 129 DALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVL 188

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           +A C+   VD+   LL ++ F    AD+ +YN ++   C      +   + D M R   +
Sbjct: 189 NAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCA 248

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRL 325
           P+IVT+N+LI   CR G       +   +   G TP+   Y T+IDG C+   LE A  +
Sbjct: 249 PNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEI 308

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
              M + G+ P VV YN++L+ LC   R ++A  LL+EM +K    D+VT N L++ +C+
Sbjct: 309 LNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQ 368

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            G     +++  +ML  G M D  TY  +I+GFCK   +D A  LL  M   G  P+  S
Sbjct: 369 NGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVS 428

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+ ++ G C+        +L+ + + +G   +   +  LI   CKK  V+ A  L   M 
Sbjct: 429 YTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQML 488

Query: 506 GNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKD---N 562
            NG   D + Y+++     +AG+ +   ++L+ M  + +     IY S + + +++   N
Sbjct: 489 VNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVN 548

Query: 563 EILDLF 568
           +++ +F
Sbjct: 549 KVIQMF 554



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 110/394 (27%), Positives = 193/394 (48%), Gaps = 2/394 (0%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           ++ D+M   +  P++     L+  L ++ L + V +V  +M + G   +I +Y  +I   
Sbjct: 237 ELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGI 296

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           CK   ++   ++L  M    ++ ++  YNT++   C      EA  +   M ++    D 
Sbjct: 297 CKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDD 356

Query: 271 VTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
           VT+N L+  FC+ G +     L   +   G  P+ +TYTT+I+G+C+   ++EA+ L + 
Sbjct: 357 VTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKS 416

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M++ G  P  V+Y  +L+ LC  GR  DA  L+++M ++   P+ VT NTLIN  CK G 
Sbjct: 417 MSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGL 476

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
              A+++  +ML  G   D  +Y  +I G  KA + + A ELL  M++ G SP+   YS 
Sbjct: 477 VEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSS 536

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG 508
           +      +     ++++ D      +  D  +Y A+I   CK+ + D A   F  M  NG
Sbjct: 537 IACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNG 596

Query: 509 ILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRR 542
            + +   YT L       G  K   ++L ++  R
Sbjct: 597 CMPNESTYTMLIKGLASEGLAKEAQELLSELCSR 630



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 117/440 (26%), Positives = 202/440 (45%), Gaps = 6/440 (1%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           ++ ++V + M           C ++LN++ +    D    + +K+   G  A+I  YN +
Sbjct: 163 RNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAV 222

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           +   C +     VE+L+ EM   D   ++ T+NTLI   C+ G+      V  +M   G 
Sbjct: 223 LKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGC 282

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALR 324
           +PDI  Y ++I G C+EG +  A  +   +   G  PN V Y T++ G C A   +EA  
Sbjct: 283 TPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEE 342

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           L   M  K      VT+N ++   C+ G +     LL +M      PD +T  T+IN +C
Sbjct: 343 LLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFC 402

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           K G    A+ +   M   G   +  +Y  ++ G C A     A+EL+  M+  G  P+  
Sbjct: 403 KEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPV 462

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
           +++ L++  C K   E  ++LL + +  G   D+  Y  +I    K  K + A  L N+M
Sbjct: 463 TFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVM 522

Query: 505 QGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAK---D 561
              GI  +++IY+S+A A  R G       + D++    +     +Y +  +S  K    
Sbjct: 523 VNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWET 582

Query: 562 NEILDLFWSHVVDRGLMSKH 581
           +  +D F++++V  G M   
Sbjct: 583 DRAID-FFAYMVSNGCMPNE 601



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 101/375 (26%), Positives = 176/375 (46%), Gaps = 42/375 (11%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           +V  QM  H   P +     +++ + K+   ++  ++  +M   G+  N+  YN ++   
Sbjct: 272 EVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGL 331

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           C +    + E+LL EM  KD   D  T+N L+  +C+ G+    + + ++M   G  PD+
Sbjct: 332 CSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDV 391

Query: 271 VTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREV 328
           +TY ++I+GFC+EG + EA  L + +   G  PN V+YT ++ G C A    +A  L   
Sbjct: 392 ITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQ 451

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M  +G  P  VT+N+++  LCK+G +  A  LL +M     +PD ++ +T+I+   K G 
Sbjct: 452 MIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGK 511

Query: 389 TASAMKVKNRMLEAGL-------------------------MLDQFT----------YKA 413
           T  A+++ N M+  G+                         M D             Y A
Sbjct: 512 TEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNA 571

Query: 414 LIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
           +I   CK  E D A +    M+  G  P+  +Y+ L+ G  ++   +   +LL E  SRG
Sbjct: 572 VISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631

Query: 474 LCVDVSVYRALIRRF 488
                ++ + L+R F
Sbjct: 632 -----ALRKHLMRHF 641



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 82/299 (27%), Positives = 140/299 (46%), Gaps = 2/299 (0%)

Query: 231 VRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREAR 290
           V  + +T+  ++   C +G   +AL V D M  +G +P    Y+ ++   CR G  R + 
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166

Query: 291 RLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
           R+   +  KG T +      +++  C    ++EA+ L   +A  G    +V+YN++L+ L
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226

Query: 349 CKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ 408
           C   R  D   L++EM     AP+ VT NTLI   C+ G      +V  +M E G   D 
Sbjct: 227 CMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDI 286

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
             Y  +I G CK   +++A E+L  M   G  P+   Y+ ++ G C+    +   +LL E
Sbjct: 287 RMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSE 346

Query: 469 FVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
              +   +D   +  L+  FC+   VD    L   M  +G + D + YT++   + + G
Sbjct: 347 MFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEG 405



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 72/273 (26%), Positives = 134/273 (49%), Gaps = 1/273 (0%)

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           +V YN+++ G+CR G++  ARRL   +    PN  T+  ++ G C    + +AL + + M
Sbjct: 79  VVAYNAMVAGYCRAGQLAAARRLAAAVP-VPPNAYTFFPVVRGLCTRGRIADALEVLDEM 137

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
           + KG  P    Y+ IL   C+ G  R++ R+L  M+ K    D   CN ++NA C+ G  
Sbjct: 138 SFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCV 197

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
             A+ +  ++   G   D  +Y A++ G C AK     +EL+  M+    +P+  +++ L
Sbjct: 198 DEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTL 257

Query: 450 VDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGI 509
           +   C     E + ++L +    G   D+ +Y  +I   CK+  ++ A  + N M   G+
Sbjct: 258 IGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGL 317

Query: 510 LGDSVIYTSLAYAYWRAGEPKACSDILDDMYRR 542
             + V Y ++      A   K   ++L +M+++
Sbjct: 318 KPNVVCYNTVLKGLCSAERWKEAEELLSEMFQK 350



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 87/372 (23%), Positives = 156/372 (41%), Gaps = 56/372 (15%)

Query: 71  VPNY--KHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDG 128
           +P+Y  K ++  + T++  L   + +K A+ +L ++  +D        N LV        
Sbjct: 312 MPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVD------- 364

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
                     F+    +    +++ +QM  H  MP +   T ++N   K+ L D    + 
Sbjct: 365 ----------FFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLL 414

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
           K M   G   N   Y +++   C +      E+L+ +M  +    +  T+NTLI   CKK
Sbjct: 415 KSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKK 474

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTY 306
           G+  +A+ +  +M   G SPD+++Y+++I G  + G+  EA  L   +  KG +PN    
Sbjct: 475 GLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPN---- 530

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
                                           + Y+SI   L +EGR+    ++ + + +
Sbjct: 531 -------------------------------TIIYSSIACALSREGRVNKVIQMFDNIKD 559

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
             I  D V  N +I++ CK  +T  A+     M+  G M ++ TY  LI G         
Sbjct: 560 TTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKE 619

Query: 427 AKELLFGMLDAG 438
           A+ELL  +   G
Sbjct: 620 AQELLSELCSRG 631



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 83/178 (46%), Gaps = 2/178 (1%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N    + L+ F     + +  +++  QM V+   P L + + +++ L K   T+   ++ 
Sbjct: 460 NPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELL 519

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
             MV  G+  N  +Y+ +  A  +   V+KV ++   ++   +R+D   YN +I+  CK+
Sbjct: 520 NVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKR 579

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHV 304
                A+     M   G  P+  TY  LI G   EG  +EA+ L  ++  +GA   H+
Sbjct: 580 WETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGALRKHL 637


>gi|255542890|ref|XP_002512508.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548469|gb|EEF49960.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 444

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 121/417 (29%), Positives = 208/417 (49%), Gaps = 12/417 (2%)

Query: 7   LNSDTKFIKTISAIMLKGHWAKLLNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKW 66
            NS    I  +  ++ K +W++L      + L ST    +L  L        L+  +F W
Sbjct: 30  FNSSCVNIPDVVDLIAKQYWSEL-----KTHLKSTNPIALLHQLLTSGADSDLTLRYFTW 84

Query: 67  AESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS-VLNALVKIHDD 125
           ++  +    HSL+  + M+H L   K +   ++ L+     D     S + +A+    D 
Sbjct: 85  SQKEL-KLSHSLELTFRMLHSLAYAKKYSKIRSFLDNCVQNDKNYPVSFIFHAISVSGDS 143

Query: 126 PDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVW 185
              NS ++  LV   A    T+ G + F +   + L   + +C  L++ L K    D + 
Sbjct: 144 FCANSIIVDILVWADAKNLKTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVKMYKADAIL 203

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
              K+M   G+  N   +N+LI   C   +V    K+  EM  + V+ ++ TYN+LI   
Sbjct: 204 ---KEMKADGICPNEVTFNILIDGFCNDKNVSVAMKVFAEMNRQGVKPNVVTYNSLINGL 260

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNH 303
           C  G   EA  ++D+M    + P+I+T+N+L++GFC+   +++A  LF D+  +  TPN 
Sbjct: 261 CNNGKVNEATTLRDQMVNSCLEPNIITHNALLNGFCKNKMVKQAGELFEDMPKQRITPNV 320

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
            TY  LID YC+  ++E+A  L  +M  KGVYP V TYN ++  LC++G +  A   ++E
Sbjct: 321 TTYNILIDAYCKDENMEDAFALYRIMLGKGVYPDVSTYNCLIVGLCRKGDLEGARNRVSE 380

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCK 420
           M+ K +  D +T N L+++ C  G+    +++ + M + GL   Q TY  +I G+ K
Sbjct: 381 MDTKHLKADLITYNILMDSLCNKGEMKKTLRLLDEMCKKGLKPSQLTYNTMIDGYSK 437



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 80/242 (33%), Positives = 129/242 (53%), Gaps = 2/242 (0%)

Query: 252 YEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTL 309
           Y+A A+   M+ +GI P+ VT+N LI GFC +  +  A ++F ++  +G  PN VTY +L
Sbjct: 197 YKADAILKEMKADGICPNEVTFNILIDGFCNDKNVSVAMKVFAEMNRQGVKPNVVTYNSL 256

Query: 310 IDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI 369
           I+G C    + EA  LR+ M    + P ++T+N++L   CK   ++ A  L  +M +++I
Sbjct: 257 INGLCNNGKVNEATTLRDQMVNSCLEPNIITHNALLNGFCKNKMVKQAGELFEDMPKQRI 316

Query: 370 APDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKE 429
            P+  T N LI+AYCK  +   A  +   ML  G+  D  TY  LI G C+  +++ A+ 
Sbjct: 317 TPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVYPDVSTYNCLIVGLCRKGDLEGARN 376

Query: 430 LLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFC 489
            +  M          +Y+ L+D  CNK   +  L+LLDE   +GL      Y  +I  + 
Sbjct: 377 RVSEMDTKHLKADLITYNILMDSLCNKGEMKKTLRLLDEMCKKGLKPSQLTYNTMIDGYS 436

Query: 490 KK 491
           K+
Sbjct: 437 KE 438



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 117/236 (49%)

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M A G+ P  VT+N ++   C +  +  A ++  EMN + + P+ VT N+LIN  C  G 
Sbjct: 206 MKADGICPNEVTFNILIDGFCNDKNVSVAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGK 265

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
              A  ++++M+ + L  +  T+ AL++GFCK K +  A EL   M     +P+  +Y+ 
Sbjct: 266 VNEATTLRDQMVNSCLEPNIITHNALLNGFCKNKMVKQAGELFEDMPKQRITPNVTTYNI 325

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG 508
           L+D YC   N E    L    + +G+  DVS Y  LI   C+K  ++ A+   + M    
Sbjct: 326 LIDAYCKDENMEDAFALYRIMLGKGVYPDVSTYNCLIVGLCRKGDLEGARNRVSEMDTKH 385

Query: 509 ILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
           +  D + Y  L  +    GE K    +LD+M ++ L  +   Y +    Y+K+  +
Sbjct: 386 LKADLITYNILMDSLCNKGEMKKTLRLLDEMCKKGLKPSQLTYNTMIDGYSKEGNL 441



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 68/229 (29%), Positives = 115/229 (50%), Gaps = 2/229 (0%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N    + L+  + N K     ++VF +M    + P++     L+N L  +   +    + 
Sbjct: 214 NEVTFNILIDGFCNDKNVSVAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATTLR 273

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
            +MV   +  NI  +N L++  CK+  V +  +L  +M  + +  ++ TYN LI  YCK 
Sbjct: 274 DQMVNSCLEPNIITHNALLNGFCKNKMVKQAGELFEDMPKQRITPNVTTYNILIDAYCKD 333

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR--DIKGATPNHVTY 306
               +A A+   M  +G+ PD+ TYN LI G CR+G +  AR      D K    + +TY
Sbjct: 334 ENMEDAFALYRIMLGKGVYPDVSTYNCLIVGLCRKGDLEGARNRVSEMDTKHLKADLITY 393

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIR 355
             L+D  C   ++++ LRL + M  KG+ P  +TYN+++    KEG +R
Sbjct: 394 NILMDSLCNKGEMKKTLRLLDEMCKKGLKPSQLTYNTMIDGYSKEGNLR 442



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 54/170 (31%), Positives = 89/170 (52%), Gaps = 2/170 (1%)

Query: 154 DQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKS 213
           DQM    L P++     LLN   K+++     ++++ M +  +  N+  YN+LI A CK 
Sbjct: 274 DQMVNSCLEPNIITHNALLNGFCKNKMVKQAGELFEDMPKQRITPNVTTYNILIDAYCKD 333

Query: 214 SDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTY 273
            +++    L   M  K V  D+ TYN LI   C+KG    A      M+ + +  D++TY
Sbjct: 334 ENMEDAFALYRIMLGKGVYPDVSTYNCLIVGLCRKGDLEGARNRVSEMDTKHLKADLITY 393

Query: 274 NSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEE 321
           N L+   C +G M++  RL  ++  KG  P+ +TY T+IDGY +  +L +
Sbjct: 394 NILMDSLCNKGEMKKTLRLLDEMCKKGLKPSQLTYNTMIDGYSKEGNLRQ 443



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 82/145 (56%)

Query: 144 KMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLY 203
           KM +   ++F+ M    + P++    +L+++  KD   +  + +Y+ M+  GV  ++  Y
Sbjct: 299 KMVKQAGELFEDMPKQRITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVYPDVSTY 358

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER 263
           N LI   C+  D++     + EM+ K ++ADL TYN L+   C KG   + L + D M +
Sbjct: 359 NCLIVGLCRKGDLEGARNRVSEMDTKHLKADLITYNILMDSLCNKGEMKKTLRLLDEMCK 418

Query: 264 EGISPDIVTYNSLIHGFCREGRMRE 288
           +G+ P  +TYN++I G+ +EG +R+
Sbjct: 419 KGLKPSQLTYNTMIDGYSKEGNLRQ 443



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 60/232 (25%), Positives = 110/232 (47%), Gaps = 3/232 (1%)

Query: 333 GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
           G+   V + N ++  L K   +  A+ +L EM    I P+ VT N LI+ +C   + + A
Sbjct: 178 GLKLSVTSCNPLMSGLVK---MYKADAILKEMKADGICPNEVTFNILIDGFCNDKNVSVA 234

Query: 393 MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
           MKV   M   G+  +  TY +LI+G C   +++ A  L   M+++   P+  +++ L++G
Sbjct: 235 MKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATTLRDQMVNSCLEPNIITHNALLNG 294

Query: 453 YCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGD 512
           +C     +   +L ++   + +  +V+ Y  LI  +CK E ++ A  L+ +M G G+  D
Sbjct: 295 FCKNKMVKQAGELFEDMPKQRITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVYPD 354

Query: 513 SVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
              Y  L     R G+ +   + + +M  + L   L  Y     S     E+
Sbjct: 355 VSTYNCLIVGLCRKGDLEGARNRVSEMDTKHLKADLITYNILMDSLCNKGEM 406



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 47/194 (24%), Positives = 89/194 (45%), Gaps = 8/194 (4%)

Query: 398 RMLEAGLMLDQFTYKALIHGFCKAKEMD-IAKELLFGMLDAGFSPSYCSYSWLVDGYCNK 456
           R  + GL L   +   L+ G  K  + D I KE    M   G  P+  +++ L+DG+CN 
Sbjct: 173 RASDYGLKLSVTSCNPLMSGLVKMYKADAILKE----MKADGICPNEVTFNILIDGFCND 228

Query: 457 NNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIY 516
            N    +K+  E   +G+  +V  Y +LI   C   KV+ A  L + M  + +  + + +
Sbjct: 229 KNVSVAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATTLRDQMVNSCLEPNIITH 288

Query: 517 TSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRG 576
            +L   + +    K   ++ +DM ++R+   +  Y     +Y KD  + D F  +   R 
Sbjct: 289 NALLNGFCKNKMVKQAGELFEDMPKQRITPNVTTYNILIDAYCKDENMEDAFALY---RI 345

Query: 577 LMSKHIFKEMQLRN 590
           ++ K ++ ++   N
Sbjct: 346 MLGKGVYPDVSTYN 359


>gi|125563733|gb|EAZ09113.1| hypothetical protein OsI_31378 [Oryza sativa Indica Group]
          Length = 618

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 113/389 (29%), Positives = 195/389 (50%), Gaps = 5/389 (1%)

Query: 133 LSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMV 192
           L  LVI  + + +  + L VF ++R    +P L AC  +L+ L K  +   VW+++ +M+
Sbjct: 109 LGVLVIALSQMALPDEALSVFGRLRE---LPALPACNAILDGLVKAHMLARVWELFDEML 165

Query: 193 QLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHY 252
             G+V ++  YN LI+AC    DV K  ++  +M  + +  ++ TY T+I   C++    
Sbjct: 166 GRGMVPSVVTYNTLINACRHQGDVAKAWEVWDQMVARRIDPNVVTYTTMIYALCEEDCIG 225

Query: 253 EALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLI 310
           +A  +   M+  G+ P++ TYN+L+    +   ++ A   + D+   G  PN V +TTLI
Sbjct: 226 DAEGLFLEMKEAGMRPNLYTYNALMSSHFKRDNIKHALVFYYDLLKCGLVPNDVIFTTLI 285

Query: 311 DGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIA 370
           DG C+AN + EA  +   M    V P V  YNS++    + G  ++A     E+  K++ 
Sbjct: 286 DGLCKANRITEAKNIFLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIRKELR 345

Query: 371 PDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL 430
           PD  TC+ ++   C  G    A +    M ++G+ L+   Y  LI  +CK+  +D A   
Sbjct: 346 PDEFTCSIVVRGLCDGGQMQVATRFLEVMQQSGIALNAAAYNVLIDEYCKSGNLDEALVT 405

Query: 431 LFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCK 490
              M + G  P+  +YS L+DG+      E  + +  E V++G+  +V  Y ALI    K
Sbjct: 406 CTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIHGHAK 465

Query: 491 KEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
              +D A  L   M+  GI  +++  + L
Sbjct: 466 NGDMDAAFWLQKEMEEKGIYSNAITVSVL 494



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 123/455 (27%), Positives = 202/455 (44%), Gaps = 70/455 (15%)

Query: 38  LTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSA 97
           + S   +  L+N   C H   ++ A+  W +        ++ ++ TMI+ L +      A
Sbjct: 170 VPSVVTYNTLIN--ACRHQGDVAKAWEVWDQMVARRIDPNVVTYTTMIYALCEEDCIGDA 227

Query: 98  QNM---LEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFD 154
           + +   +++  +R  L T    NAL+  H   D   H L    +FY            +D
Sbjct: 228 EGLFLEMKEAGMRPNLYT---YNALMSSHFKRDNIKHAL----VFY------------YD 268

Query: 155 QMRVHNLMPHLHACTVLLNSLAK-DRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKS 213
            ++   L+P+    T L++ L K +R+T+    ++  M +  V   + +YN LIH   +S
Sbjct: 269 LLKC-GLVPNDVIFTTLIDGLCKANRITE-AKNIFLDMPRYEVAPTVPVYNSLIHGAFRS 326

Query: 214 SDVDKVEKLLCEMEFKDVRADLFT-----------------------------------Y 238
               +      E+  K++R D FT                                   Y
Sbjct: 327 GYAQEALAFFQEIIRKELRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQSGIALNAAAY 386

Query: 239 NTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI-- 296
           N LI  YCK G   EAL    RM   G+ P++VTY+SLI G  + G M  A  ++ ++  
Sbjct: 387 NVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVA 446

Query: 297 KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRD 356
           KG  PN VTYT LI G+ +  D++ A  L++ M  KG+Y   +T + ++  LC+E R++D
Sbjct: 447 KGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLVDGLCRENRVQD 506

Query: 357 ANRLLNEMNEKKIAPDN------VTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
           A R + E + +K +  N      VT  TLI      G    A    + M ++G++ D+FT
Sbjct: 507 AVRFIMEYSGQKKSEKNPSIANSVTYMTLIYGLYIDGQYNEACHFFSCMRDSGMVPDRFT 566

Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
           Y  +I G C    +  A  L   M+  G  P+ C+
Sbjct: 567 YTLVIRGLCMLGYVLNAMMLYADMVKVGVKPTKCA 601



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 77/277 (27%), Positives = 132/277 (47%), Gaps = 5/277 (1%)

Query: 253 EALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLI 310
           EAL+V  R+ RE   P +   N+++ G  +   +     LF ++  +G  P+ VTY TLI
Sbjct: 124 EALSVFGRL-RE--LPALPACNAILDGLVKAHMLARVWELFDEMLGRGMVPSVVTYNTLI 180

Query: 311 DGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIA 370
           +      D+ +A  + + M A+ + P VVTY +++  LC+E  I DA  L  EM E  + 
Sbjct: 181 NACRHQGDVAKAWEVWDQMVARRIDPNVVTYTTMIYALCEEDCIGDAEGLFLEMKEAGMR 240

Query: 371 PDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL 430
           P+  T N L++++ K  +   A+     +L+ GL+ +   +  LI G CKA  +  AK +
Sbjct: 241 PNLYTYNALMSSHFKRDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCKANRITEAKNI 300

Query: 431 LFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCK 490
              M     +P+   Y+ L+ G       +  L    E + + L  D      ++R  C 
Sbjct: 301 FLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIRKELRPDEFTCSIVVRGLCD 360

Query: 491 KEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
             ++  A R   +MQ +GI  ++  Y  L   Y ++G
Sbjct: 361 GGQMQVATRFLEVMQQSGIALNAAAYNVLIDEYCKSG 397


>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
          Length = 791

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 129/462 (27%), Positives = 213/462 (46%), Gaps = 53/462 (11%)

Query: 167 ACTVLLNSLAKD-RLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC-------------- 211
           A T LL  L  D R +D +  V ++M +LG + N+  YN+L+   C              
Sbjct: 124 AFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHM 183

Query: 212 ------------------------KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCK 247
                                   K  D DK      EM  + +  D+ TYN++IA  CK
Sbjct: 184 MADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCK 243

Query: 248 KGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVT 305
                +A+ V + M + G+ PD +TYNS++HG+C  G+ +EA    + ++  G  P+ VT
Sbjct: 244 AQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVT 303

Query: 306 YTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMN 365
           Y+ L+D  C+     EA ++ + M  +G+ P + TY ++L+    +G + + + LL+ M 
Sbjct: 304 YSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMV 363

Query: 366 EKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMD 425
              I PD+   + LI AY   G    AM V ++M + GL  +  TY A+I   CK+  ++
Sbjct: 364 RNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVE 423

Query: 426 IAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
            A      M+D G SP    Y+ L+ G C  N  E   +L+ E + RG+C++   + ++I
Sbjct: 424 DAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSII 483

Query: 486 RRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
              CK+ +V  +++LF LM   G+  + + Y +L   Y  AG+      +L  M    L 
Sbjct: 484 DSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLK 543

Query: 546 ITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKEMQ 587
                Y +    Y K + + D               +FKEM+
Sbjct: 544 PNTVTYSTLINGYCKISRMEDALV------------LFKEME 573



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 113/431 (26%), Positives = 198/431 (45%), Gaps = 41/431 (9%)

Query: 112 TPSVLNALVKIHDDPDGNS--HVLSWLVIFYANLKM--TQDGLQVFDQMRVHNLMPHLHA 167
           +   L  L  + DD  G S   V+S+  +     K   +      + +M    ++P +  
Sbjct: 174 SQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVT 233

Query: 168 CTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEME 227
              ++ +L K +  D   +V   MV+ GV+ +   YN ++H  C S    +    L +M 
Sbjct: 234 YNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMR 293

Query: 228 FKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMR 287
              V  D+ TY+ L+   CK G   EA  + D M + G+ P+I TY +L+ G+  +G + 
Sbjct: 294 SDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALV 353

Query: 288 EARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSIL 345
           E   L   +   G  P+H  ++ LI  Y     +++A+ +   M  +G+ P  VTY +++
Sbjct: 354 EMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVI 413

Query: 346 RKLCKEGRIRDANRLLNEMNEKKIAPDNV----------TCN------------------ 377
             LCK GR+ DA     +M ++ ++P N+          TCN                  
Sbjct: 414 GILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGIC 473

Query: 378 -------TLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL 430
                  ++I+++CK G    + K+   M+  G+  +  TY  LI+G+C A +MD A +L
Sbjct: 474 LNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKL 533

Query: 431 LFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCK 490
           L GM+  G  P+  +YS L++GYC  +  E  L L  E  S G+  D+  Y  +++   +
Sbjct: 534 LSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQ 593

Query: 491 KEKVDYAQRLF 501
             +   A+ L+
Sbjct: 594 TRRTAAAKELY 604



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 109/393 (27%), Positives = 194/393 (49%), Gaps = 4/393 (1%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
            +L+ +V+    PD   +V S L+  YAN       + VF +MR   L P+      ++ 
Sbjct: 357 GLLDLMVRNGIHPD--HYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIG 414

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
            L K    +     +++M+  G+     +YN LIH  C  +  ++ E+L+ EM  + +  
Sbjct: 415 ILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICL 474

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           +   +N++I  +CK+G   E+  + + M R G+ P+++TYN+LI+G+C  G+M EA +L 
Sbjct: 475 NTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLL 534

Query: 294 RDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
             +   G  PN VTY+TLI+GYC+ + +E+AL L + M + GV P ++TYN IL+ L + 
Sbjct: 535 SGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQT 594

Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
            R   A  L   + E     +  T N +++  CK   T  A+++   +    L L+  T+
Sbjct: 595 RRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTF 654

Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
             +I    K    D AK+L       G  P+Y +Y  + +    +   E L +L      
Sbjct: 655 NIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMED 714

Query: 472 RGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
            G  VD  +   ++R   ++ ++  A    +++
Sbjct: 715 NGCTVDSGMLNFIVRELLQRGEITRAGTYLSMI 747



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 111/390 (28%), Positives = 183/390 (46%), Gaps = 10/390 (2%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG---VVANIHLY 203
           +D   VFD++        ++     L  +A+D     V + Y +M + G   V  ++  Y
Sbjct: 32  EDARHVFDELLRRGRGASIYGLNRALADVARDSPAAAVSR-YNRMARAGADEVTPDLCTY 90

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL-AVQDRME 262
            +LI  CC++  +D     L  +  K  R D   +  L+   C      +A+  V  RM 
Sbjct: 91  GILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 150

Query: 263 REGISPDIVTYNSLIHGFCREGRMREARRLFRDIK-----GATPNHVTYTTLIDGYCRAN 317
             G  P++ +YN L+ G C E R +EA  L   +      G+ P+ V+YTT+I+G+ +  
Sbjct: 151 ELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEG 210

Query: 318 DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCN 377
           D ++A      M  +G+ P VVTYNSI+  LCK   +  A  +LN M +  + PD +T N
Sbjct: 211 DSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYN 270

Query: 378 TLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA 437
           ++++ YC  G    A+    +M   G+  D  TY  L+   CK      A+++   M   
Sbjct: 271 SILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKR 330

Query: 438 GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYA 497
           G  P   +Y  L+ GY  K     +  LLD  V  G+  D  V+  LI  +  + KVD A
Sbjct: 331 GLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQA 390

Query: 498 QRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
             +F+ M+  G+  ++V Y ++     ++G
Sbjct: 391 MLVFSKMRQQGLNPNAVTYGAVIGILCKSG 420



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 111/416 (26%), Positives = 190/416 (45%), Gaps = 39/416 (9%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLA-KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           ++FD M    L P +     LL   A K  L +M   +   MV+ G+  + +++++LI A
Sbjct: 322 KIFDSMTKRGLKPEITTYGTLLQGYATKGALVEM-HGLLDLMVRNGIHPDHYVFSILICA 380

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
                 VD+   +  +M  + +  +  TY  +I + CK G   +A+   ++M  EG+SP 
Sbjct: 381 YANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPG 440

Query: 270 IVTYNSLIHGFC-----------------------------------REGRMREARRLFR 294
            + YNSLIHG C                                   +EGR+ E+ +LF 
Sbjct: 441 NIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFE 500

Query: 295 DIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEG 352
            +   G  PN +TY TLI+GYC A  ++EA++L   M + G+ P  VTY++++   CK  
Sbjct: 501 LMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKIS 560

Query: 353 RIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYK 412
           R+ DA  L  EM    ++PD +T N ++    +   TA+A ++  R+ E+G  ++  TY 
Sbjct: 561 RMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYN 620

Query: 413 ALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSR 472
            ++HG CK K  D A ++   +          +++ ++D        +    L   F S 
Sbjct: 621 IILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSN 680

Query: 473 GLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
           GL  +   YR +      +  ++   +LF  M+ NG   DS +   +     + GE
Sbjct: 681 GLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGE 736



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 77/322 (23%), Positives = 132/322 (40%), Gaps = 42/322 (13%)

Query: 254 ALAVQDRMEREG---ISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTT 308
           A++  +RM R G   ++PD+ TY  LI   CR GR+        ++  KG   + + +T 
Sbjct: 68  AVSRYNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTP 127

Query: 309 LIDGYC---RANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMN 365
           L+ G C   R +D  + +  R  M   G  P V +YN +L+ LC E R ++A  LL+ M 
Sbjct: 128 LLKGLCADKRTSDAMDIVLRR--MTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMA 185

Query: 366 EKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMD 425
           + +                                  G   D  +Y  +I+GF K  + D
Sbjct: 186 DDR--------------------------------GGGSPPDVVSYTTVINGFFKEGDSD 213

Query: 426 IAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
            A      MLD G  P   +Y+ ++   C     +  +++L+  V  G+  D   Y +++
Sbjct: 214 KAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSIL 273

Query: 486 RRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
             +C   +   A      M+ +G+  D V Y+ L     + G       I D M +R L 
Sbjct: 274 HGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLK 333

Query: 546 ITLKIYRSFSASYAKDNEILDL 567
             +  Y +    YA    ++++
Sbjct: 334 PEITTYGTLLQGYATKGALVEM 355



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 68/268 (25%), Positives = 104/268 (38%), Gaps = 72/268 (26%)

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
           K+++ MV++GV  N+  YN LI+  C +  +D+  KLL  M    ++ +  TY+TLI  Y
Sbjct: 497 KLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGY 556

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVT--------------------------------- 272
           CK     +AL +   ME  G+SPDI+T                                 
Sbjct: 557 CKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIEL 616

Query: 273 --YNSLIHGFCRE-----------------------------------GRMREARRLFRD 295
             YN ++HG C+                                    GR  EA+ LF  
Sbjct: 617 STYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVA 676

Query: 296 IK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGR 353
               G  PN+ TY  + +       LEE  +L   M   G        N I+R+L + G 
Sbjct: 677 FSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGE 736

Query: 354 IRDANRLLNEMNEKKIAPDNVTCNTLIN 381
           I  A   L+ ++EK  + +  T +  I+
Sbjct: 737 ITRAGTYLSMIDEKHFSLEASTASLFID 764


>gi|326513552|dbj|BAJ87795.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 538

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 117/390 (30%), Positives = 195/390 (50%), Gaps = 6/390 (1%)

Query: 134 SWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHAC--TVLLNSLAKDRLTDMVWKVYKKM 191
           S +V  +       D  ++ D+M  H +   L+AC    LL++  + +    V +V K+M
Sbjct: 137 SVVVDGFCKAGRMDDARRLLDEMPRHGV--KLNACCYNPLLDTYTRQKNDARVAEVLKEM 194

Query: 192 VQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMH 251
              GV   +  Y +L+     + D+ KVE +  E++ K+V  D++ Y+ +I  YC+ G  
Sbjct: 195 ESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRAGNV 254

Query: 252 YEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTL 309
             A  V D     GI P+  TY +LI+GFC+ G++  A  L  D  ++G   N + + T+
Sbjct: 255 RRASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNTM 314

Query: 310 IDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI 369
           IDGYCR   +++AL ++ VM   G+   V TYN++   LC+  R+ DA +LL+ M E  +
Sbjct: 315 IDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENGV 374

Query: 370 APDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKE 429
             + V+  TLI+ + K GD   A ++   M   G      TY  +I G+ K+  +  A+ 
Sbjct: 375 ESNYVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAER 434

Query: 430 LLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFC 489
               M   G  P   +Y+ LV G+C     +  L+L +E   RG   +V  Y ALI    
Sbjct: 435 FKKEMEKKGLVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYTALISGLA 494

Query: 490 KKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
           K+ + + A + ++ M   G+  D  +Y+ L
Sbjct: 495 KEGRSEEAFQFYDNMLAAGLTPDDTLYSML 524



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 96/312 (30%), Positives = 149/312 (47%), Gaps = 37/312 (11%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
            VFD+++  N+   ++  + ++N+  +        +V+ + V  G+  N   Y  LI+  
Sbjct: 224 SVFDEIKRKNVAGDVYFYSAVINAYCRAGNVRRASEVFDECVGNGIEPNERTYGALINGF 283

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           CK   ++  E LL +M+ + V  +   +NT+I  YC+ GM  +AL ++  MER GI  D+
Sbjct: 284 CKIGQIEAAEMLLTDMQLRGVGHNQIIFNTMIDGYCRHGMVDKALEIKAVMERMGIQLDV 343

Query: 271 VTYNSLIHGFCR-----------------------------------EGRMREARRLFRD 295
            TYN+L  G CR                                   EG M EARRLFRD
Sbjct: 344 YTYNTLACGLCRVNRMEDAKKLLHIMTENGVESNYVSYTTLISIHSKEGDMVEARRLFRD 403

Query: 296 I--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGR 353
           +  KG+ P+ VTY  +IDGY ++  + EA R ++ M  KG+ P V TY +++   C  G+
Sbjct: 404 MEGKGSRPSVVTYNVMIDGYIKSGSIREAERFKKEMEKKGLVPDVYTYAALVHGHCVNGK 463

Query: 354 IRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKA 413
           +  A RL  EM ++   P+ V    LI+   K G +  A +  + ML AGL  D   Y  
Sbjct: 464 VDVALRLFEEMKQRGAKPNVVAYTALISGLAKEGRSEEAFQFYDNMLAAGLTPDDTLYSM 523

Query: 414 LIHGFCKAKEMD 425
           L+      K  D
Sbjct: 524 LVGSLHTDKRKD 535



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 101/373 (27%), Positives = 162/373 (43%), Gaps = 37/373 (9%)

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER 263
           +V++   CK+  +D   +LL EM    V+ +   YN L+  Y ++        V   ME 
Sbjct: 137 SVVVDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAEVLKEMES 196

Query: 264 EGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEE 321
            G+ P + TY  L+ G    G + +   +F +IK      +   Y+ +I+ YCRA ++  
Sbjct: 197 GGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRAGNVRR 256

Query: 322 ALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
           A  + +     G+ P   TY +++   CK G+I  A  LL +M  + +  + +  NT+I+
Sbjct: 257 ASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNTMID 316

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
            YC+ G    A+++K  M   G+ LD +TY  L  G C+   M+ AK+LL  M + G   
Sbjct: 317 GYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENGVES 376

Query: 442 SYCSYSWL-----------------------------------VDGYCNKNNEEALLKLL 466
           +Y SY+ L                                   +DGY    +     +  
Sbjct: 377 NYVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAERFK 436

Query: 467 DEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRA 526
            E   +GL  DV  Y AL+   C   KVD A RLF  M+  G   + V YT+L     + 
Sbjct: 437 KEMEKKGLVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYTALISGLAKE 496

Query: 527 GEPKACSDILDDM 539
           G  +      D+M
Sbjct: 497 GRSEEAFQFYDNM 509



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/217 (23%), Positives = 99/217 (45%), Gaps = 11/217 (5%)

Query: 374 VTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFG 433
           ++ + +++ +CK G    A ++ + M   G+ L+   Y  L+  + + K      E+L  
Sbjct: 134 LSASVVVDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAEVLKE 193

Query: 434 MLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEK 493
           M   G  P+  +Y+ LVDG     +   +  + DE   + +  DV  Y A+I  +C+   
Sbjct: 194 MESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRAGN 253

Query: 494 VDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRS 553
           V  A  +F+   GNGI  +   Y +L   + + G+ +A   +L DM  R +     I+  
Sbjct: 254 VRRASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIF-- 311

Query: 554 FSASYAKDNEILDLFWSH-VVDRGLMSKHIFKEMQLR 589
                   N ++D +  H +VD+ L  K + + M ++
Sbjct: 312 --------NTMIDGYCRHGMVDKALEIKAVMERMGIQ 340



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/138 (24%), Positives = 62/138 (44%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           ++F  M      P +    V+++   K        +  K+M + G+V +++ Y  L+H  
Sbjct: 399 RLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAERFKKEMEKKGLVPDVYTYAALVHGH 458

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           C +  VD   +L  EM+ +  + ++  Y  LI+   K+G   EA    D M   G++PD 
Sbjct: 459 CVNGKVDVALRLFEEMKQRGAKPNVVAYTALISGLAKEGRSEEAFQFYDNMLAAGLTPDD 518

Query: 271 VTYNSLIHGFCREGRMRE 288
             Y+ L+     + R  E
Sbjct: 519 TLYSMLVGSLHTDKRKDE 536


>gi|296087527|emb|CBI34116.3| unnamed protein product [Vitis vinifera]
          Length = 727

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 157/609 (25%), Positives = 262/609 (43%), Gaps = 86/609 (14%)

Query: 45  KVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKI 104
           +V+   YN  + P+L+ +FF   + +   ++H++ ++  +I +L + +  +  Q++L +I
Sbjct: 65  RVVEIFYNLKNEPNLAWSFFTQLKES--GFQHNVDTYAALIRVLCRWRLERKLQSLLSEI 122

Query: 105 ALRDFLSTPSVLN-------ALVKIHDDPDGNSH------VLSWLVIFYANLKMTQDGLQ 151
                 S  SVL         +++         H      VL  LV  Y  + M  + + 
Sbjct: 123 VG----SKESVLGFDITALFDVLREGGGEVEGEHSSVLILVLDMLVKAYVRVGMFDEAID 178

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
              Q +    +PH+ +C  L+N L +    DM   +Y+ + +LG+  N + Y + I A C
Sbjct: 179 ALFQTKRRGFVPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALC 238

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYC---KKGMHYEALAVQDRMEREGISP 268
           +  + ++   +  EME   V  +  T +T I   C   +  + YEAL    R  R    P
Sbjct: 239 RKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLGYEAL----RALRAANWP 294

Query: 269 -DIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
            D   Y ++I GFC E +++EA  +F D+  +G  P+   Y  LI  YC+A +L +A+ L
Sbjct: 295 IDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVAL 354

Query: 326 REVMAAKGVYPGVVT----------------YNSILRKLCKEGRIRDANRLLNEMNEKKI 369
              M + G+   +V                 YN ++  LCK G++ +A  LLNEM  +++
Sbjct: 355 HNDMVSNGIKTNLVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRM 414

Query: 370 APDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKE 429
           + D V   TLI  YC  G    A  +   M E G+  D  TY  L+ GF +      A E
Sbjct: 415 SLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALE 474

Query: 430 LLFGMLDAGFSPSYCS-------------------------------YSWLVDGYCNKNN 458
           LL  +   G  P+  +                               YS +VDGYC  N 
Sbjct: 475 LLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLEDKCLENYSAMVDGYCKANF 534

Query: 459 EEALLKLLDEFVSRG----LCVDVS----VYRALIRRFCKKEKVDYAQRLFNLMQGNGIL 510
                +L      +G    L +DV     +Y  LI  FC+   +  AQ +F+++   GI 
Sbjct: 535 TRKAYELFSRLSKQGILRMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGIT 594

Query: 511 GDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDL--F 568
            D + YT +   Y R    +   DI +DM  R +   +  Y      ++K N + D    
Sbjct: 595 PDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSKTNNLQDAINL 654

Query: 569 WSHVVDRGL 577
           +  ++ RGL
Sbjct: 655 YDEMIARGL 663



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 97/312 (31%), Positives = 163/312 (52%), Gaps = 14/312 (4%)

Query: 188 YKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCK 247
           +K+    G+  +  LYN+++ A CK   V++  +LL EM+ + +  D+  Y TLIA YC 
Sbjct: 371 FKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCL 430

Query: 248 KGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVT 305
           +G   +A  + + M+  GI PDIVTYN L+ GF R G  +EA  L   I  +G  PN  T
Sbjct: 431 QGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSAT 490

Query: 306 YTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMN 365
           +  +I+G C A  ++EA      +  K +      Y++++   CK    R A  L + ++
Sbjct: 491 HNRIIEGLCMAGKVKEAEAFLNTLEDKCLE----NYSAMVDGYCKANFTRKAYELFSRLS 546

Query: 366 EKKI--------APDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHG 417
           ++ I         P+ +    LI A+C+ GD   A  V + ++E G+  D  TY  +I+G
Sbjct: 547 KQGILRMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMING 606

Query: 418 FCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVD 477
           +C+   +  A+++   M + G  P   +Y+ ++DG+   NN +  + L DE ++RGL  D
Sbjct: 607 YCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSKTNNLQDAINLYDEMIARGLQPD 666

Query: 478 VSVYRALIRRFC 489
           +  Y AL+   C
Sbjct: 667 IVTYTALLPGKC 678



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 110/403 (27%), Positives = 196/403 (48%), Gaps = 32/403 (7%)

Query: 144 KMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLY 203
           K +  G +    +R  N      A T ++     +        V+  MV  G+  + ++Y
Sbjct: 276 KRSDLGYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIY 335

Query: 204 NVLIHACCKSSDVDKVEKLLCEM--------------EFKD--VRADLFTYNTLIALYCK 247
             LIHA CK+ ++ +   L  +M              EF+D  +  D   YN ++   CK
Sbjct: 336 GALIHAYCKAGNLLQAVALHNDMVSNGIKTNLVDQFKEFRDSGIFLDEVLYNIVVDALCK 395

Query: 248 KGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVT 305
            G   EA+ + + M+   +S D+V Y +LI G+C +G++ +A+ +F ++K  G  P+ VT
Sbjct: 396 LGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVT 455

Query: 306 YTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMN 365
           Y  L+ G+ R    +EAL L + +  +G+ P   T+N I+  LC  G++++A   LN + 
Sbjct: 456 YNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLE 515

Query: 366 EKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLM----LD----QFTYKALIHG 417
           +K +       + +++ YCK   T  A ++ +R+ + G++    LD    Q  Y  LI  
Sbjct: 516 DKCLE----NYSAMVDGYCKANFTRKAYELFSRLSKQGILRMLALDVEPNQIMYGKLIGA 571

Query: 418 FCKAKEMDIAKELLFGML-DAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCV 476
           FC+  +M  A +L+F ML + G +P   +Y+ +++GYC  N       + ++   RG+  
Sbjct: 572 FCRDGDMKRA-QLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKP 630

Query: 477 DVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
           DV  Y  ++    K   +  A  L++ M   G+  D V YT+L
Sbjct: 631 DVITYTVVLDGHSKTNNLQDAINLYDEMIARGLQPDIVTYTAL 673



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 70/250 (28%), Positives = 122/250 (48%), Gaps = 14/250 (5%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D   +F++M+   + P +    +L+   +++ L     ++   +   G+  N   +N +I
Sbjct: 436 DAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRII 495

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI- 266
              C +  V + E  L  +E K +      Y+ ++  YCK     +A  +  R+ ++GI 
Sbjct: 496 EGLCMAGKVKEAEAFLNTLEDKCLE----NYSAMVDGYCKANFTRKAYELFSRLSKQGIL 551

Query: 267 -------SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRAN 317
                   P+ + Y  LI  FCR+G M+ A+ +F  +  +G TP+ +TYT +I+GYCR N
Sbjct: 552 RMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVN 611

Query: 318 DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCN 377
            L EA  +   M  +G+ P V+TY  +L    K   ++DA  L +EM  + + PD VT  
Sbjct: 612 CLREARDIFNDMKERGIKPDVITYTVVLDGHSKTNNLQDAINLYDEMIARGLQPDIVTYT 671

Query: 378 TLINAYCKIG 387
            L+   C  G
Sbjct: 672 ALLPGKCNFG 681



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 87/401 (21%), Positives = 163/401 (40%), Gaps = 56/401 (13%)

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           DL T   +   Y  K     A +   +++  G   ++ TY +LI   CR    R+ + L 
Sbjct: 60  DLNTSRVVEIFYNLKNEPNLAWSFFTQLKESGFQHNVDTYAALIRVLCRWRLERKLQSLL 119

Query: 294 RDIKGATPNHVTYTT----------------------------LIDGYCRANDLEEALRL 325
            +I G+  + + +                              L+  Y R    +EA+  
Sbjct: 120 SEIVGSKESVLGFDITALFDVLREGGGEVEGEHSSVLILVLDMLVKAYVRVGMFDEAIDA 179

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
                 +G  P +++ N ++ +L + G+I  A  +   +    + P++ T    I A C+
Sbjct: 180 LFQTKRRGFVPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCR 239

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            G+   A+ V   M EAG+  +  T    I G C  K  D+  E L  +  A +     +
Sbjct: 240 KGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLGYEALRALRAANWPIDTFA 299

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+ ++ G+C++   +    +  + V+ G+  D  +Y ALI  +CK   +  A  L N M 
Sbjct: 300 YTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMV 359

Query: 506 GN----------------GILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLK 549
            N                GI  D V+Y  +  A  + G+ +   ++L++M  RR+ + + 
Sbjct: 360 SNGIKTNLVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVV 419

Query: 550 IYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKEMQLRN 590
            Y +  A Y    +++D            +K++F+EM+ R 
Sbjct: 420 HYTTLIAGYCLQGKLVD------------AKNMFEEMKERG 448


>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
 gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
          Length = 695

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 120/438 (27%), Positives = 209/438 (47%), Gaps = 42/438 (9%)

Query: 158 VHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVD 217
           V + +P L +C +LL SL        V   +  +V  G   +   +N  + AC  + D+D
Sbjct: 116 VRSPLPSLSSCNLLLESLLSVGRHADVRAAFGLLVAAGARPDTFAWNKAVQACVAAGDLD 175

Query: 218 KVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER-EGISP-DIVTYNS 275
                                              EALA+  RM R EG  P D  +YN 
Sbjct: 176 -----------------------------------EALAMLRRMGRSEGAPPPDAFSYNV 200

Query: 276 LIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKG 333
           +I G  R G+  +A ++F ++  +G  PN +TY T+IDG+ +  DLE   RLR+ M   G
Sbjct: 201 VIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGHVKGGDLEAGFRLRDQMLQDG 260

Query: 334 VYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAM 393
             P VVTYN +L  LC+ GR+ +   L++EM    + PD  T + L +   + GD+ + +
Sbjct: 261 RKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDSRTML 320

Query: 394 KVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGY 453
            +    L+ G+++  +T   L++G CK  ++  A+++L  ++  G  P+   Y+ L++GY
Sbjct: 321 SLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGY 380

Query: 454 CNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDS 513
           C   + +    + ++  SR +  D   Y ALI   CK E +  A+ L   M+ +G+    
Sbjct: 381 CQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSV 440

Query: 514 VIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVV 573
             + +L  AY RAG+ + C  +L DM  + +   +  + S   ++ K+ +I +     ++
Sbjct: 441 ETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVA--IL 498

Query: 574 DRGLMSKHIFKEMQLRNS 591
           D  ++ K +    Q+ NS
Sbjct: 499 DD-MIHKDVVPNAQVYNS 515



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 108/432 (25%), Positives = 210/432 (48%), Gaps = 4/432 (0%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D L+VFD+M    + P+      +++   K    +  +++  +M+Q G   N+  YNVL+
Sbjct: 213 DALKVFDEMVDRGVAPNQITYNTMIDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLL 272

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
              C++  +D+   L+ EM    +  D FTY+ L     + G     L++     ++G+ 
Sbjct: 273 SGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVI 332

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
               T + L++G C++G++ +A ++   +   G  P    Y TLI+GYC+  DL+ A  +
Sbjct: 333 IGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSI 392

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
            E M ++ + P  +TYN+++  LCK   I +A  L+ EM +  + P   T NTLI+AY +
Sbjct: 393 FEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGR 452

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            G       V + M + G+  +  ++ +++  FCK  ++  A  +L  M+     P+   
Sbjct: 453 AGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQV 512

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+ ++D Y      E    L+++  S G+   +  Y  L++  CK  ++D A+ L   + 
Sbjct: 513 YNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLT 572

Query: 506 GNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEIL 565
             G+  D V Y ++  A    G+     ++L +M++  +  TL+ Y    ++      + 
Sbjct: 573 NQGLRPDVVSYNTIISACCNKGDTDRALELLQEMHKYDIRPTLRTYHPLLSALGSAGRVH 632

Query: 566 DL--FWSHVVDR 575
           D+   + H+V +
Sbjct: 633 DMECLYQHMVHK 644



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 101/369 (27%), Positives = 190/369 (51%), Gaps = 2/369 (0%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           + D+M  ++++P     ++L + L +   +  +  ++ + ++ GV+   +  ++L++  C
Sbjct: 287 LMDEMTSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLC 346

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           K   V K E++L  +    +      YNTLI  YC+      A ++ ++M+   I PD +
Sbjct: 347 KDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHI 406

Query: 272 TYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           TYN+LI+G C+   + EA  L  +++  G  P+  T+ TLID Y RA  LE+   +   M
Sbjct: 407 TYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDM 466

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
             KG+   V+++ S+++  CK G+I +A  +L++M  K + P+    N++I+AY + G T
Sbjct: 467 QDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGT 526

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
             A  +  +M  +G+    FTY  L+ G CK  ++D A+EL++ + + G  P   SY+ +
Sbjct: 527 EQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTI 586

Query: 450 VDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGI 509
           +   CNK + +  L+LL E     +   +  Y  L+       +V   + L+  M    +
Sbjct: 587 ISACCNKGDTDRALELLQEMHKYDIRPTLRTYHPLLSALGSAGRVHDMECLYQHMVHKNV 646

Query: 510 LGDSVIYTS 518
              S IY +
Sbjct: 647 EPSSSIYGT 655



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 100/327 (30%), Positives = 165/327 (50%), Gaps = 2/327 (0%)

Query: 203 YNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRME 262
           YNV+I    +S       K+  EM  + V  +  TYNT+I  + K G       ++D+M 
Sbjct: 198 YNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGHVKGGDLEAGFRLRDQML 257

Query: 263 REGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGAT--PNHVTYTTLIDGYCRANDLE 320
           ++G  P++VTYN L+ G CR GRM E R L  ++   +  P+  TY+ L DG  R  D  
Sbjct: 258 QDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDSR 317

Query: 321 EALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLI 380
             L L      KGV  G  T + +L  LCK+G++  A ++L  +    + P     NTLI
Sbjct: 318 TMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLI 377

Query: 381 NAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFS 440
           N YC++ D   A  +  +M    +  D  TY ALI+G CK + +  A++L+  M  +G  
Sbjct: 378 NGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVD 437

Query: 441 PSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRL 500
           PS  +++ L+D Y      E    +L +   +G+  +V  + ++++ FCK  K+  A  +
Sbjct: 438 PSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAI 497

Query: 501 FNLMQGNGILGDSVIYTSLAYAYWRAG 527
            + M    ++ ++ +Y S+  AY  +G
Sbjct: 498 LDDMIHKDVVPNAQVYNSIIDAYIESG 524



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 98/396 (24%), Positives = 169/396 (42%), Gaps = 60/396 (15%)

Query: 84  MIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANL 143
           +++ L K+     A+ +LE +     + T ++ N L+                   Y  +
Sbjct: 341 LLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLIN-----------------GYCQV 383

Query: 144 KMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLY 203
           +  Q    +F+QM+  ++ P              D +T                     Y
Sbjct: 384 RDLQGAFSIFEQMKSRHIRP--------------DHIT---------------------Y 408

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER 263
           N LI+  CK   + + E L+ EME   V   + T+NTLI  Y + G   +   V   M+ 
Sbjct: 409 NALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQD 468

Query: 264 EGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEE 321
           +GI  +++++ S++  FC+ G++ EA  +  D+  K   PN   Y ++ID Y  +   E+
Sbjct: 469 KGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQ 528

Query: 322 ALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
           A  L E M + GV   + TYN +L+ LCK  +I +A  L+  +  + + PD V+ NT+I+
Sbjct: 529 AFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIIS 588

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
           A C  GDT  A+++   M +  +     TY  L+     A  +   + L   M+     P
Sbjct: 589 ACCNKGDTDRALELLQEMHKYDIRPTLRTYHPLLSALGSAGRVHDMECLYQHMVHKNVEP 648

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVD 477
           S   Y    +      NE  +  L  E   +G+  D
Sbjct: 649 SSSIYGTRCE------NESKVASLKKEMSEKGIAFD 678


>gi|359482689|ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Vitis vinifera]
          Length = 879

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 141/548 (25%), Positives = 253/548 (46%), Gaps = 28/548 (5%)

Query: 25  HWAKLLNPNIASS--LTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHW 82
            W + L    + S  L S   H VL  + +      L   FF W      +   +  ++ 
Sbjct: 43  QWEENLQTRFSESEVLASDVAHLVLDRIRDV----ELGLKFFDWVSRGQYSGPINGFAYS 98

Query: 83  TMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYAN 142
           +++ +L +++ F   + +LE + + +   T   ++ +++ + D   +  V   L ++Y  
Sbjct: 99  SLLKLLARSRVFSEMEVVLENMRVEEMSPTREAMSIVIQAYSD---SGLVEKALELYYFV 155

Query: 143 LKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHL 202
           LK              +   P + AC  LLN L K    ++  K+Y +M+++    +  +
Sbjct: 156 LK-------------TYTYFPDVIACNSLLNMLVKLGRIEIARKLYDEMLEIDGAGDRCV 202

Query: 203 YN----VLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQ 258
            N    +++   CK   +++  KL+ +   +    ++  YNTLI  YCKKG    A  + 
Sbjct: 203 DNYSTCIMVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLF 262

Query: 259 DRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRA 316
             ++ +G  P + TY ++I+GFC++G  +   RL  ++  +G T N   Y T+ID   + 
Sbjct: 263 IELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKH 322

Query: 317 NDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTC 376
             + +A+   E M   G  P +VTYN+++   C++G++ +A++LL +   K + P+  + 
Sbjct: 323 GHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSY 382

Query: 377 NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD 436
             LI+AYCK G    A      M E G   D  TY AL+HG   A E+D+A  +   ML+
Sbjct: 383 TPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLE 442

Query: 437 AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDY 496
            G  P    Y+ L+ G C K    A   LL E + + +  D  VY  L+  F +   +D 
Sbjct: 443 RGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDE 502

Query: 497 AQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSA 556
           A++LF L    G+    V Y ++   Y + G  K     ++ M +R L      Y +   
Sbjct: 503 ARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVID 562

Query: 557 SYAKDNEI 564
            Y K +++
Sbjct: 563 GYVKQHDL 570



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 120/453 (26%), Positives = 199/453 (43%), Gaps = 72/453 (15%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           ++G ++ +       +P++     L++   K    +M   ++ ++   G +  +  Y  +
Sbjct: 221 EEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAI 280

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           I+  CK  D   +++LL EM  + +  ++  YNT+I    K G   +A+   + M   G 
Sbjct: 281 INGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGC 340

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCR--------- 315
            PDIVTYN+LI G CR+G++ EA +L      KG  PN  +YT LI  YC+         
Sbjct: 341 KPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASN 400

Query: 316 --------------------------ANDLEEALRLREVMAAKGVYPGVVTYNSILRKLC 349
                                     A +++ AL +RE M  +GV+P    YN ++  LC
Sbjct: 401 WLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLC 460

Query: 350 KEGRIRDANRLLNEMNEKKIAPDN-----------------------------------V 374
           K+ ++  A  LL EM ++ + PD                                    V
Sbjct: 461 KKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIV 520

Query: 375 TCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGM 434
             N +I  YCK G    AM   NRM +  L  D+FTY  +I G+ K  ++D A+++   M
Sbjct: 521 GYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREM 580

Query: 435 LDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKV 494
           +     P+  +Y+ L++G+C K +    LK+  E  + GL  +V  Y  LI  FCK+ K+
Sbjct: 581 VKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKL 640

Query: 495 DYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
             A   F  M  N  + + V +  L   + + G
Sbjct: 641 IDAASFFEEMLMNKCVPNDVTFNYLVNGFSKNG 673



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 123/506 (24%), Positives = 214/506 (42%), Gaps = 78/506 (15%)

Query: 75  KHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLS 134
           K  + ++ T+I    ++     A  +LE+   +  +        L+  +    G     +
Sbjct: 341 KPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASN 400

Query: 135 WLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQL 194
           WL+      +MT+ G +           P L     L++ L      D+   + +KM++ 
Sbjct: 401 WLI------EMTERGHK-----------PDLVTYGALVHGLVVAGEVDVALTIREKMLER 443

Query: 195 GVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTY---------------- 238
           GV  +  +YN+L+   CK   +   + LL EM  + V  D F Y                
Sbjct: 444 GVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEA 503

Query: 239 -------------------NTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHG 279
                              N +I  YCK GM  +A+A  +RM++  ++PD  TY+++I G
Sbjct: 504 RKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDG 563

Query: 280 FCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPG 337
           + ++  +  A+++FR++      PN VTYT+LI+G+CR  DL  +L++   M A G+ P 
Sbjct: 564 YVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPN 623

Query: 338 VVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKN 397
           VVTY+ ++   CKE ++ DA     EM   K  P++VT N L+N + K G  A + K   
Sbjct: 624 VVTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGFSKNGTRAISEKGNE 683

Query: 398 RMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFG-MLDAGFSPSYCSYSWLVDGYCNK 456
                  M   F                      FG M+  G++P   +Y+ ++   C  
Sbjct: 684 FQENKQSMFLNF----------------------FGRMISDGWAPRSAAYNSILICLCQY 721

Query: 457 NNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIY 516
                 L+L ++  S+G   D   + AL+   C + +    + + +       L  +V Y
Sbjct: 722 GMFRTALQLSNKMTSKGCIPDSVSFVALLHGVCLEGRSKEWKNIVSCNLNERELQIAVNY 781

Query: 517 TSLAYAYWRAGEPKACSDILDDMYRR 542
           +S+   Y   G  +A S IL  M+  
Sbjct: 782 SSILDQYLPQGTSEA-SVILQTMFEE 806



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 66/284 (23%), Positives = 120/284 (42%), Gaps = 7/284 (2%)

Query: 302 NHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLL 361
           N   Y++L+    R+    E   + E M  + + P     + +++     G +  A  L 
Sbjct: 93  NGFAYSSLLKLLARSRVFSEMEVVLENMRVEEMSPTREAMSIVIQAYSDSGLVEKALELY 152

Query: 362 N-EMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLE---AG-LMLDQFTYKALIH 416
              +      PD + CN+L+N   K+G    A K+ + MLE   AG   +D ++   ++ 
Sbjct: 153 YFVLKTYTYFPDVIACNSLLNMLVKLGRIEIARKLYDEMLEIDGAGDRCVDNYSTCIMVK 212

Query: 417 GFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCV 476
           G CK  +++  ++L+      G  P+   Y+ L+DGYC K + E    L  E   +G   
Sbjct: 213 GLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLP 272

Query: 477 DVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDIL 536
            V  Y A+I  FCKK       RL   M   G+  +  +Y ++  A ++ G      + +
Sbjct: 273 TVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETI 332

Query: 537 DDMYRRRLMITLKIYRSFSASYAKDNEI--LDLFWSHVVDRGLM 578
           + M        +  Y +  +   +D ++   D      + +GLM
Sbjct: 333 EGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLM 376


>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
 gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
          Length = 443

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 108/319 (33%), Positives = 168/319 (52%), Gaps = 2/319 (0%)

Query: 203 YNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRME 262
           +++LI+   K+  + +   L  E        D+ TY T++    K     EA+A+ +++ 
Sbjct: 2   FSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKIT 61

Query: 263 REGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLE 320
             G +P I TYN+L++G C+ GR+ EA  L R I   G TP+ VTYT+LIDG  +     
Sbjct: 62  ANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSF 121

Query: 321 EALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLI 380
           EA +L + MA++G+    V Y +++R L + G+I  A+ +   M  +   PD VT +T+I
Sbjct: 122 EAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMI 181

Query: 381 NAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFS 440
           +  CK G   +A+++   M   GL  ++  Y ALIHG CKA++MD A E+L  M  A  +
Sbjct: 182 DGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCT 241

Query: 441 PSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRL 500
           P   +Y+ L+DG C   +  A     DE +  G   DV  Y  LI  FCK    D A  +
Sbjct: 242 PDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGV 301

Query: 501 FNLMQGNGILGDSVIYTSL 519
           F+ M  +    + V Y +L
Sbjct: 302 FDDMSSSRCSPNVVTYGTL 320



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 108/375 (28%), Positives = 188/375 (50%), Gaps = 2/375 (0%)

Query: 169 TVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEF 228
           ++L+N L K  +      + ++    G   +IH Y  ++    K+  + +   L+ ++  
Sbjct: 3   SILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKITA 62

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
                 + TYN L+   CK G   EA+ +  ++   G +PD+VTY SLI G  ++ R  E
Sbjct: 63  NGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFE 122

Query: 289 ARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILR 346
           A +LF+++  +G   + V YT LI G  +A  + +A  + + M ++G  P VVT ++++ 
Sbjct: 123 AYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMID 182

Query: 347 KLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLML 406
            LCK GRI  A R+   M  + +AP+ V  + LI+  CK      A+++  +M +A    
Sbjct: 183 GLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTP 242

Query: 407 DQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLL 466
           D  TY  LI G CK+ ++  A+     ML+AG  P   +Y+ L+ G+C   N +A   + 
Sbjct: 243 DTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVF 302

Query: 467 DEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRA 526
           D+  S     +V  Y  LI   CK+ ++  A   +  M+  G   DS +Y+SL     ++
Sbjct: 303 DDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKS 362

Query: 527 GEPKACSDILDDMYR 541
           G+ +    + D+M R
Sbjct: 363 GKLEGGCMLFDEMER 377



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 107/347 (30%), Positives = 177/347 (51%), Gaps = 2/347 (0%)

Query: 165 LHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLC 224
           +H  T +++ LAK++       + +K+   G    I  YN L++  CK   +++   LL 
Sbjct: 34  IHTYTTIVDWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLR 93

Query: 225 EMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREG 284
           ++       D+ TY +LI    KK   +EA  +   M   G++ D V Y +LI G  + G
Sbjct: 94  KIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQAG 153

Query: 285 RMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYN 342
           ++ +A  +++ +  +G  P+ VT +T+IDG C+A  +  A+R+ + M A+G+ P  V Y+
Sbjct: 154 KIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYS 213

Query: 343 SILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEA 402
           +++  LCK  ++  A  +L +M +    PD +T N LI+  CK GD A+A    + MLEA
Sbjct: 214 ALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEA 273

Query: 403 GLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEAL 462
           G   D +TY  LI GFCKA   D A  +   M  +  SP+  +Y  L+ G C +      
Sbjct: 274 GCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKA 333

Query: 463 LKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGI 509
                    RG   D  VY +L+   CK  K++    LF+ M+ +G+
Sbjct: 334 SLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGV 380



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 120/400 (30%), Positives = 185/400 (46%), Gaps = 4/400 (1%)

Query: 131 HVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKK 190
           H  + +V + A  K  Q+ + + +++  +   P +     LLN L K    +    + +K
Sbjct: 35  HTYTTIVDWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRK 94

Query: 191 MVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGM 250
           +V  G   ++  Y  LI    K     +  KL  EM  + +  D   Y  LI    + G 
Sbjct: 95  IVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGK 154

Query: 251 HYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTT 308
             +A +V   M  +G  PD+VT +++I G C+ GR+  A R+F+ +  +G  PN V Y+ 
Sbjct: 155 IPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSA 214

Query: 309 LIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKK 368
           LI G C+A  ++ AL +   M      P  +TYN ++  LCK G +  A    +EM E  
Sbjct: 215 LIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAG 274

Query: 369 IAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAK 428
             PD  T N LI+ +CK G+T +A  V + M  +    +  TY  LI G CK +++  A 
Sbjct: 275 CKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKAS 334

Query: 429 ELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRF 488
                M + G  P    YS LVDG C     E    L DE    G+    +  R LI   
Sbjct: 335 LYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANSQTRTR-LIFHL 393

Query: 489 CKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
           CK  +VD A  LFN ++  G +     Y S+  A  ++G+
Sbjct: 394 CKANRVDEAVSLFNAIRKEG-MPHPYAYNSIISALIKSGK 432



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 109/429 (25%), Positives = 194/429 (45%), Gaps = 21/429 (4%)

Query: 78  LQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLV 137
           + ++ T++  L KNK  + A  ++EKI       T +  NAL             L+ L 
Sbjct: 34  IHTYTTIVDWLAKNKKIQEAVALMEKITANGCTPTIATYNAL-------------LNGL- 79

Query: 138 IFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVV 197
                +   ++ + +  ++  +   P +   T L++ L K + +   +K++K+M   G+ 
Sbjct: 80  ---CKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLA 136

Query: 198 ANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAV 257
            +   Y  LI    ++  + +   +   M  +    D+ T +T+I   CK G    A+ +
Sbjct: 137 LDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRI 196

Query: 258 QDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGA--TPNHVTYTTLIDGYCR 315
              ME  G++P+ V Y++LIHG C+  +M  A  +   +K A  TP+ +TY  LIDG C+
Sbjct: 197 FKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCK 256

Query: 316 ANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVT 375
           + D+  A    + M   G  P V TYN ++   CK G    A  + ++M+  + +P+ VT
Sbjct: 257 SGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVT 316

Query: 376 CNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGML 435
             TLI+  CK      A      M E G   D F Y +L+ G CK+ +++    L   M 
Sbjct: 317 YGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEME 376

Query: 436 DAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVD 495
            +G + S  + + L+   C  N  +  + L +     G+      Y ++I    K  KV+
Sbjct: 377 RSGVANSQ-TRTRLIFHLCKANRVDEAVSLFNAIRKEGM-PHPYAYNSIISALIKSGKVN 434

Query: 496 YAQRLFNLM 504
             Q ++  M
Sbjct: 435 EGQAVYQEM 443


>gi|359497434|ref|XP_003635514.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Vitis vinifera]
          Length = 347

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 102/296 (34%), Positives = 161/296 (54%), Gaps = 2/296 (0%)

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           D+FTYNTLI   CKKG    A  + + M+ +G  P+++TY  LI  FC+EGR+ EAR + 
Sbjct: 13  DIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVL 72

Query: 294 RDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
            ++  KG   N V Y  LI   C+   +++AL +   M++KG  P + T+NS++  LCK 
Sbjct: 73  DEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKV 132

Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
            +  +A  L  +M  + +  + +T NTLI+A+ + G    A+K+ N ML  G  LD  TY
Sbjct: 133 NKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITY 192

Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
             LI   C+A  ++    L   M+  G +P+  S + L++G C   N +  L+ L + + 
Sbjct: 193 NGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIH 252

Query: 472 RGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
           RGL  D+  Y +LI   CK  +   A  LF+ +Q  GI  D++ Y +L   + + G
Sbjct: 253 RGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEG 308



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 103/346 (29%), Positives = 178/346 (51%), Gaps = 2/346 (0%)

Query: 187 VYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYC 246
           +++ M+ +G   +I  YN LI   CK   +    +L+ EM+ K    ++ TY  LI  +C
Sbjct: 1   MHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFC 60

Query: 247 KKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHV 304
           K+G   EA  V D M  +G++ + V YN LI   C++ ++++A  +F D+  KG  P+  
Sbjct: 61  KEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIF 120

Query: 305 TYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM 364
           T+ +LI G C+ N  EEAL L + M  +GV    +TYN+++    + G +++A +L+N+M
Sbjct: 121 TFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDM 180

Query: 365 NEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEM 424
             +    D++T N LI A C+ G+    + +   M+  GL  +  +   LI+G C+   +
Sbjct: 181 LFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNI 240

Query: 425 DIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRAL 484
             A E L  M+  G +P   +Y+ L++G C     +  L L D+    G+C D   Y  L
Sbjct: 241 QHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTL 300

Query: 485 IRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPK 530
           I   CK+   D A  L +    +G + + V +  L   + + G+ +
Sbjct: 301 ISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQE 346



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 102/312 (32%), Positives = 164/312 (52%), Gaps = 2/312 (0%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           ++ ++M++    P++   T+L++   K+   +    V  +M   G+  N   YN LI A 
Sbjct: 35  ELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISAL 94

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           CK   V     +  +M  K  + D+FT+N+LI   CK     EAL +   M  EG+  + 
Sbjct: 95  CKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANT 154

Query: 271 VTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
           +TYN+LIH F R G M+EA +L  D+  +G   + +TY  LI   CRA ++E+ L L E 
Sbjct: 155 ITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFED 214

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M +KG+ P  ++ N ++  LC+ G I+ A   L +M  + + PD VT N+LIN  CK G 
Sbjct: 215 MMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGR 274

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
              A+ + +++   G+  D  TY  LI   CK    D A  LL   +D+GF P+  ++  
Sbjct: 275 AQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYI 334

Query: 449 LVDGYCNKNNEE 460
           LV  +  + ++E
Sbjct: 335 LVSNFIKEGDQE 346



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 99/336 (29%), Positives = 159/336 (47%), Gaps = 2/336 (0%)

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
           P +     L+  L K        ++  +M   G   N+  Y +LI   CK   +++   +
Sbjct: 12  PDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNV 71

Query: 223 LCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR 282
           L EM  K +  +   YN LI+  CK     +AL +   M  +G  PDI T+NSLI G C+
Sbjct: 72  LDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCK 131

Query: 283 EGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVT 340
             +  EA  L++D  ++G   N +TY TLI  + R   ++EAL+L   M  +G     +T
Sbjct: 132 VNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDIT 191

Query: 341 YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML 400
           YN +++ LC+ G I     L  +M  K + P+N++CN LIN  C+ G+   A++    M+
Sbjct: 192 YNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMI 251

Query: 401 EAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEE 460
             GL  D  TY +LI+G CK      A  L   +   G  P   +Y+ L+  +C +   +
Sbjct: 252 HRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFD 311

Query: 461 ALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDY 496
               LL   V  G   +   +  L+  F K+   ++
Sbjct: 312 DAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQEF 347



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 88/281 (31%), Positives = 147/281 (52%), Gaps = 2/281 (0%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           ++   V D+M    L  +      L+++L KD        ++  M   G   +I  +N L
Sbjct: 66  EEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSL 125

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           I   CK +  ++   L  +M  + V A+  TYNTLI  + ++G   EAL + + M   G 
Sbjct: 126 IFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGC 185

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
             D +TYN LI   CR G + +   LF D+  KG  PN+++   LI+G CR  +++ AL 
Sbjct: 186 PLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALE 245

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
               M  +G+ P +VTYNS++  LCK GR ++A  L +++  + I PD +T NTLI+ +C
Sbjct: 246 FLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHC 305

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMD 425
           K G    A  + +R +++G + ++ T+  L+  F K  + +
Sbjct: 306 KEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQE 346



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 73/244 (29%), Positives = 108/244 (44%), Gaps = 37/244 (15%)

Query: 146 TQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNV 205
            QD L +F  M      P +     L+  L K    +    +Y+ M+  GV+AN   YN 
Sbjct: 100 VQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNT 159

Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAV-QDRMER- 263
           LIHA  +   + +  KL+ +M F+    D  TYN LI   C+ G   + LA+ +D M + 
Sbjct: 160 LIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKG 219

Query: 264 ---------------------------------EGISPDIVTYNSLIHGFCREGRMREAR 290
                                             G++PDIVTYNSLI+G C+ GR +EA 
Sbjct: 220 LNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEAL 279

Query: 291 RLFR--DIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
            LF    ++G  P+ +TY TLI  +C+    ++A  L       G  P  VT+  ++   
Sbjct: 280 NLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNF 339

Query: 349 CKEG 352
            KEG
Sbjct: 340 IKEG 343


>gi|356518050|ref|XP_003527697.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Glycine max]
          Length = 556

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 111/363 (30%), Positives = 189/363 (52%), Gaps = 2/363 (0%)

Query: 149 GLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIH 208
           G ++   +    L P++   T L++   K     +   ++ KM +LG+V N H Y+VL++
Sbjct: 177 GFRLLAMLEEFGLSPNVVIYTTLIDGCCKYGNVMLAKNLFCKMDRLGLVPNPHTYSVLMN 236

Query: 209 ACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISP 268
              K     +  ++   M+   +  + + YN LI+ YC  GM  +A  V   M  +GI+ 
Sbjct: 237 GFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIAC 296

Query: 269 DIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLR 326
            ++TYN LI G CR  +  EA +L   +   G +PN VTY  LI+G+C    ++ A+RL 
Sbjct: 297 GVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLF 356

Query: 327 EVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKI 386
             + + G+ P +VTYN+++    K   +  A  L+ EM E+ IAP  VT   LI+A+ ++
Sbjct: 357 NQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARL 416

Query: 387 GDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSY 446
             T  A ++ + M ++GL+ D +TY  LIHG C    M  A +L   + +    P+   Y
Sbjct: 417 NYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLGEMHLQPNSVIY 476

Query: 447 SWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQG 506
           + ++ GYC + +    L+LL+E V  G+  +V+ + + I   C+ EK   A+ L   M  
Sbjct: 477 NTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMIN 536

Query: 507 NGI 509
           +G+
Sbjct: 537 SGL 539



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 114/442 (25%), Positives = 216/442 (48%), Gaps = 5/442 (1%)

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
           Y +   T   L     M     +P  +    L+  L +    D  W ++ ++ +  VV +
Sbjct: 99  YVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLMCLLIRSNYFDKAWWIFNEL-KSKVVLD 157

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
            + + ++I  CC++    K  +LL  +E   +  ++  Y TLI   CK G    A  +  
Sbjct: 158 AYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKYGNVMLAKNLFC 217

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRAN 317
           +M+R G+ P+  TY+ L++GF ++G  RE  +++ ++K  G  PN   Y  LI  YC   
Sbjct: 218 KMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNGG 277

Query: 318 DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCN 377
            +++A ++   M  KG+  GV+TYN ++  LC+  +  +A +L++++N+  ++P+ VT N
Sbjct: 278 MVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYN 337

Query: 378 TLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA 437
            LIN +C +G   +A+++ N++  +GL     TY  LI G+ K + +  A +L+  M + 
Sbjct: 338 ILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEER 397

Query: 438 GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYA 497
             +PS  +Y+ L+D +   N  E   ++       GL  DV  Y  LI   C    +  A
Sbjct: 398 CIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEA 457

Query: 498 QRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSAS 557
            +LF  +    +  +SVIY ++ + Y + G       +L++M    ++  +  + S    
Sbjct: 458 SKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTIGL 517

Query: 558 YAKDNEI--LDLFWSHVVDRGL 577
             +D +    +L    +++ GL
Sbjct: 518 LCRDEKWKEAELLLGQMINSGL 539



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 89/320 (27%), Positives = 176/320 (55%), Gaps = 2/320 (0%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N H  S L+  +    + ++G Q+++ M+   ++P+ +A   L++      + D  +KV+
Sbjct: 227 NPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVF 286

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
            +M + G+   +  YN+LI   C+     +  KL+ ++    +  ++ TYN LI  +C  
Sbjct: 287 AEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDV 346

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTY 306
           G    A+ + ++++  G+SP +VTYN+LI G+ +   +  A  L +++  +   P+ VTY
Sbjct: 347 GKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTY 406

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
           T LID + R N  E+A  +  +M   G+ P V TY+ ++  LC  G +++A++L   + E
Sbjct: 407 TILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLGE 466

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
             + P++V  NT+I+ YCK G +  A+++ N M+ +G++ +  ++ + I   C+ ++   
Sbjct: 467 MHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTIGLLCRDEKWKE 526

Query: 427 AKELLFGMLDAGFSPSYCSY 446
           A+ LL  M+++G  PS   Y
Sbjct: 527 AELLLGQMINSGLKPSVSLY 546



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 100/384 (26%), Positives = 158/384 (41%), Gaps = 56/384 (14%)

Query: 238 YNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSL--------------------- 276
           Y+T++  Y       +AL     M  EG  P   T+N+L                     
Sbjct: 92  YDTIVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLMCLLIRSNYFDKAWWIFNELK 151

Query: 277 -------------IHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEE 321
                        I G C  G   +  RL   ++  G +PN V YTTLIDG C+  ++  
Sbjct: 152 SKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKYGNVML 211

Query: 322 ALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
           A  L   M   G+ P   TY+ ++    K+G  R+  ++   M    I P+    N LI+
Sbjct: 212 AKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLIS 271

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
            YC  G    A KV   M E G+     TY  LI G C+ K+   A +L+  +   G SP
Sbjct: 272 EYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSP 331

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
           +  +Y+ L++G+C+    +  ++L ++  S GL   +  Y  LI  + K E +  A  L 
Sbjct: 332 NIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLV 391

Query: 502 NLMQGNGILGDSVIYTSLAYAYWRAG-EPKAC--------SDILDDMYRRRLMI------ 546
             M+   I    V YT L  A+ R     KAC        S ++ D+Y   ++I      
Sbjct: 392 KEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVH 451

Query: 547 -----TLKIYRSFSASYAKDNEIL 565
                  K+++S    + + N ++
Sbjct: 452 GNMKEASKLFKSLGEMHLQPNSVI 475



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 72/288 (25%), Positives = 111/288 (38%), Gaps = 72/288 (25%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N++  + L+  Y N  M     +VF +MR   +   +    +L+  L + +      K+ 
Sbjct: 262 NAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLV 321

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCK- 247
            K+ ++G+  NI  YN+LI+  C    +D   +L  +++   +   L TYNTLIA Y K 
Sbjct: 322 HKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKV 381

Query: 248 ----------KGMHYEALA------------------------VQDRMEREGISPDIVTY 273
                     K M    +A                        +   ME+ G+ PD+ TY
Sbjct: 382 ENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTY 441

Query: 274 NSLIHGFCREGRMREARRLFRDIKGA--TPNHVTYTTLIDGYCRANDLEEALRLREVMAA 331
           + LIHG C  G M+EA +LF+ +      PN V Y T+I GYC+      ALRL   M  
Sbjct: 442 SVLIHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVH 501

Query: 332 KGVYP-----------------------------------GVVTYNSI 344
            G+ P                                    V  Y  +
Sbjct: 502 SGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSVSLYKMV 549


>gi|242070015|ref|XP_002450284.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
 gi|241936127|gb|EES09272.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
          Length = 727

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 136/451 (30%), Positives = 192/451 (42%), Gaps = 73/451 (16%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           L  F  +  H + P +  C  +L  L      D V  VY++M+QL +   I  YN L+ +
Sbjct: 193 LAAFRVVACHGVAPDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLDS 252

Query: 210 CCKSSDVDKVEKLLCEME-------FKDV-----------------------------RA 233
             K    D+   LL EME         DV                             +A
Sbjct: 253 FLKEGRKDEASMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSMRLSKKA 312

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHG-------------- 279
             FTYN LI    ++G   +  A+Q  ME EGI P +VTYN++IHG              
Sbjct: 313 SSFTYNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKF 372

Query: 280 ---------------------FCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRA 316
                                +C+ G ++EA  L  D++  G  P  +TY TLIDGYCR 
Sbjct: 373 AEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRL 432

Query: 317 NDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTC 376
             LEEA RL+E M  +G +P V TY  ++    K   +  A    +EM  K + PD    
Sbjct: 433 GGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAY 492

Query: 377 NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD 436
           NT I A   +GDT  A +++  M+  G+  D  TY  +I G CK   +  AK+L   M+ 
Sbjct: 493 NTRICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVS 552

Query: 437 AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDY 496
            G  P   +Y+ L+  +C +       KLL+  VS GL   V  Y  LI   C++  +  
Sbjct: 553 DGLQPDCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYS 612

Query: 497 AQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
           A   F  M   GI  + + Y  L +A  R G
Sbjct: 613 AYGWFRKMLDVGIEPNEITYNVLIHALCRTG 643



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 127/421 (30%), Positives = 192/421 (45%), Gaps = 38/421 (9%)

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           ++ F A     ++  ++ D MR+            L+ +L +      V  +  +M   G
Sbjct: 286 VISFLAREGHLENAAKLVDSMRLSKKASSF-TYNPLITALLERGFVQKVEALQMEMENEG 344

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
           ++  +  YN +IH   KS  V+  +    EM    +  DL TYN+++  YCK G   EAL
Sbjct: 345 IMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEAL 404

Query: 256 AVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGY 313
            +   + R G++P ++TYN+LI G+CR G + EARRL  ++  +G  P+  TYT L++G 
Sbjct: 405 WLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGS 464

Query: 314 ------------------------CRA-----------NDLEEALRLREVMAAKGVYPGV 338
                                   C A            D  +A +LREVM  KG+YP  
Sbjct: 465 HKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVMMLKGIYPDT 524

Query: 339 VTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNR 398
           VTYN I+  LCK G ++DA  L  +M    + PD +T   LI+A+C+ G  + A K+ N 
Sbjct: 525 VTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARKLLNG 584

Query: 399 MLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNN 458
           M+  GL     TY  LIH  C+   +  A      MLD G  P+  +Y+ L+   C    
Sbjct: 585 MVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCRTGR 644

Query: 459 EEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTS 518
                    E + RGL  +   Y  LI   C++     A RL+  M  NGI  D   + +
Sbjct: 645 TLLAYHHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNA 704

Query: 519 L 519
           L
Sbjct: 705 L 705



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 101/389 (25%), Positives = 179/389 (46%), Gaps = 37/389 (9%)

Query: 155 QMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSS 214
           +M    +MP L     +++ L K    +     + +M  +G++ ++  YN +++  CK+ 
Sbjct: 339 EMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAG 398

Query: 215 DVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYN 274
           ++ +   LL ++    +   + TYNTLI  YC+ G   EA  +++ M  +G  PD+ TY 
Sbjct: 399 NLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYT 458

Query: 275 SLIHGFCREGRMREARRLFRD-------------------------------------IK 297
            L++G  +   +  AR  F +                                     +K
Sbjct: 459 ILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVMMLK 518

Query: 298 GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDA 357
           G  P+ VTY  +IDG C+  +L++A  L+  M + G+ P  +TY  ++   C+ G + +A
Sbjct: 519 GIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEA 578

Query: 358 NRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHG 417
            +LLN M    + P  VT   LI+  C+ G+  SA     +ML+ G+  ++ TY  LIH 
Sbjct: 579 RKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHA 638

Query: 418 FCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVD 477
            C+     +A      ML+ G +P+  +Y+ L+DG C + N    ++L  E    G+  D
Sbjct: 639 LCRTGRTLLAYHHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPD 698

Query: 478 VSVYRALIRRFCKKEKVDYAQRLFNLMQG 506
              + AL + F K       + L N++ G
Sbjct: 699 YCTHNALFKGFDKGHMYHAIEYLENIVLG 727



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/235 (28%), Positives = 110/235 (46%), Gaps = 3/235 (1%)

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
           V+A  GV P V   N +LR L    R  D   +  EM + +I P  VT NTL++++ K G
Sbjct: 198 VVACHGVAPDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLDSFLKEG 257

Query: 388 --DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
             D AS +  +      G +L+  TY  +I    +   ++ A +L+  M  +  + S+ +
Sbjct: 258 RKDEASMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSMRLSKKASSF-T 316

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+ L+     +   + +  L  E  + G+   +  Y A+I    K E+V+ AQ  F  M+
Sbjct: 317 YNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMR 376

Query: 506 GNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAK 560
             G+L D + Y S+   Y +AG  K    +L D+ R  L  T+  Y +    Y +
Sbjct: 377 AMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCR 431


>gi|242069107|ref|XP_002449830.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
 gi|241935673|gb|EES08818.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
          Length = 676

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 112/379 (29%), Positives = 191/379 (50%), Gaps = 3/379 (0%)

Query: 168 CTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEME 227
           CTV++ +  +      V  ++ +MV++G   N+  Y   +   CK   V +   +L EM 
Sbjct: 219 CTVVVRAFCRQGRFRDVPGLFGRMVEMGNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMV 278

Query: 228 FKDVRADLFTYNTLIALYCKKGMHYEALAVQDRM-EREGISPDIVTYNSLIHGFCREGRM 286
            K ++ +++T+ +LI   CK G    A  +  ++ +     P++ TY  +I G+C+EG++
Sbjct: 279 GKGLKPNVYTHTSLIDGLCKIGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKL 338

Query: 287 REARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSI 344
             A  L   +  +G  PN  TYTTLIDG+CR    + A  L   M  +G  P + TYN+I
Sbjct: 339 ARAEMLLGRMVEQGLAPNTNTYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYNAI 398

Query: 345 LRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGL 404
           +   CK+G+I+ A ++L     + + PD VT   LI  +CK G    A+ + N+M E   
Sbjct: 399 IGGFCKKGKIQQAYKVLRMATSQGLCPDKVTYTMLITEHCKQGHITYALDLFNQMAENSC 458

Query: 405 MLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLK 464
             D  TY  +I  +C+ ++M+ +++L    L  G  P+  +Y+ ++ GYC      + LK
Sbjct: 459 HPDIDTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRVGKSTSALK 518

Query: 465 LLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYW 524
           + +  V  G   D   Y ALI   CK+ +++ A+ LF  M    ++   V   +LAY Y 
Sbjct: 519 VFERMVQHGCLPDPITYGALISGLCKESRLEEARALFETMLDKHMVPCDVTCVTLAYEYC 578

Query: 525 RAGEPKACSDILDDMYRRR 543
           R  +       LD + +R+
Sbjct: 579 RRDKTTIAVSFLDGLDKRQ 597



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 117/437 (26%), Positives = 211/437 (48%), Gaps = 8/437 (1%)

Query: 109 FLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHAC 168
           F   P +   +V++ + P+  ++  +W V         +    V ++M    L P+++  
Sbjct: 232 FRDVPGLFGRMVEMGNPPNVVNYT-AW-VDGLCKRGYVKQAFHVLEEMVGKGLKPNVYTH 289

Query: 169 TVLLNSLAKDRLTDMVWKVYKKMVQLGVV-ANIHLYNVLIHACCKSSDVDKVEKLLCEME 227
           T L++ L K   T+  ++++ K+V+      N+H Y V+I   CK   + + E LL  M 
Sbjct: 290 TSLIDGLCKIGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMV 349

Query: 228 FKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMR 287
            + +  +  TY TLI  +C+ G    A  + ++M+ EG  P+I TYN++I GFC++G+++
Sbjct: 350 EQGLAPNTNTYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQ 409

Query: 288 EARRLFR--DIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSIL 345
           +A ++ R    +G  P+ VTYT LI  +C+   +  AL L   MA    +P + TY +I+
Sbjct: 410 QAYKVLRMATSQGLCPDKVTYTMLITEHCKQGHITYALDLFNQMAENSCHPDIDTYTTII 469

Query: 346 RKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLM 405
              C++ ++  + +L ++     + P   T  ++I  YC++G + SA+KV  RM++ G +
Sbjct: 470 AMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRVGKSTSALKVFERMVQHGCL 529

Query: 406 LDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKL 465
            D  TY ALI G CK   ++ A+ L   MLD    P   +   L   YC ++     +  
Sbjct: 530 PDPITYGALISGLCKESRLEEARALFETMLDKHMVPCDVTCVTLAYEYCRRDKTTIAVSF 589

Query: 466 LDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWR 525
           LD    R          AL+R+    + +D A      +       D   YTS   + + 
Sbjct: 590 LDGLDKRQ---QAHAADALVRKLSAVDNLDAASLFLKNVLDKHYAVDHATYTSFINSCYE 646

Query: 526 AGEPKACSDILDDMYRR 542
           +      S+I + + +R
Sbjct: 647 SNRYALASEISEKISKR 663



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 97/374 (25%), Positives = 182/374 (48%), Gaps = 3/374 (0%)

Query: 194 LGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYE 253
           +GV  +   +  L+  CC+    ++ + LL  M  +    D  T   ++  +C++G   +
Sbjct: 175 MGVRPDARSFRALVLGCCQEGRFEEADALLAAMWREGFSLDSATCTVVVRAFCRQGRFRD 234

Query: 254 ALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLID 311
              +  RM   G  P++V Y + + G C+ G +++A  +  ++  KG  PN  T+T+LID
Sbjct: 235 VPGLFGRMVEMGNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLKPNVYTHTSLID 294

Query: 312 GYCRANDLEEALRLREVMAAKGVY-PGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIA 370
           G C+    E A RL   +     Y P V TY  ++   CKEG++  A  LL  M E+ +A
Sbjct: 295 GLCKIGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLA 354

Query: 371 PDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL 430
           P+  T  TLI+ +C+ G    A ++ N+M   G + + +TY A+I GFCK  ++  A ++
Sbjct: 355 PNTNTYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKV 414

Query: 431 LFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCK 490
           L      G  P   +Y+ L+  +C + +    L L ++        D+  Y  +I  +C+
Sbjct: 415 LRMATSQGLCPDKVTYTMLITEHCKQGHITYALDLFNQMAENSCHPDIDTYTTIIAMYCQ 474

Query: 491 KEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKI 550
           + +++ +Q+LF+     G++     YTS+   Y R G+  +   + + M +   +     
Sbjct: 475 QRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRVGKSTSALKVFERMVQHGCLPDPIT 534

Query: 551 YRSFSASYAKDNEI 564
           Y +  +   K++ +
Sbjct: 535 YGALISGLCKESRL 548



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 78/306 (25%), Positives = 128/306 (41%), Gaps = 37/306 (12%)

Query: 289 ARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
           AR+ F D  G  P+  ++  L+ G C+    EEA  L   M  +G      T   ++R  
Sbjct: 168 ARQAF-DGMGVRPDARSFRALVLGCCQEGRFEEADALLAAMWREGFSLDSATCTVVVRAF 226

Query: 349 CKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ 408
           C++GR RD   L   M E    P+ V     ++  CK G    A  V   M+  GL  + 
Sbjct: 227 CRQGRFRDVPGLFGRMVEMGNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLKPNV 286

Query: 409 FTYKALIHGFCK----------------------------------AKEMDIAK-ELLFG 433
           +T+ +LI G CK                                   KE  +A+ E+L G
Sbjct: 287 YTHTSLIDGLCKIGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLG 346

Query: 434 -MLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKE 492
            M++ G +P+  +Y+ L+DG+C   + +   +L+++    G   ++  Y A+I  FCKK 
Sbjct: 347 RMVEQGLAPNTNTYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKG 406

Query: 493 KVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYR 552
           K+  A ++  +    G+  D V YT L   + + G      D+ + M        +  Y 
Sbjct: 407 KIQQAYKVLRMATSQGLCPDKVTYTMLITEHCKQGHITYALDLFNQMAENSCHPDIDTYT 466

Query: 553 SFSASY 558
           +  A Y
Sbjct: 467 TIIAMY 472



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 59/240 (24%), Positives = 109/240 (45%), Gaps = 1/240 (0%)

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
           R+     GV P   ++ +++   C+EGR  +A+ LL  M  +  + D+ TC  ++ A+C+
Sbjct: 169 RQAFDGMGVRPDARSFRALVLGCCQEGRFEEADALLAAMWREGFSLDSATCTVVVRAFCR 228

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            G       +  RM+E G   +   Y A + G CK   +  A  +L  M+  G  P+  +
Sbjct: 229 QGRFRDVPGLFGRMVEMGNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLKPNVYT 288

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFV-SRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
           ++ L+DG C     E   +L  + V S     +V  Y  +I  +CK+ K+  A+ L   M
Sbjct: 289 HTSLIDGLCKIGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRM 348

Query: 505 QGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
              G+  ++  YT+L   + R G      ++++ M     +  +  Y +    + K  +I
Sbjct: 349 VEQGLAPNTNTYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKI 408


>gi|115479179|ref|NP_001063183.1| Os09g0417500 [Oryza sativa Japonica Group]
 gi|50253027|dbj|BAD29277.1| putative fertility restorer homologue A [Oryza sativa Japonica
           Group]
 gi|113631416|dbj|BAF25097.1| Os09g0417500 [Oryza sativa Japonica Group]
          Length = 618

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 113/389 (29%), Positives = 194/389 (49%), Gaps = 5/389 (1%)

Query: 133 LSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMV 192
           L  LVI  + + +  + L VF ++R    +P L AC  +L+ L K  +   VW+++ +M+
Sbjct: 109 LGVLVIALSQMALPDEALSVFGRLRE---LPALPACNAILDGLVKAHMLARVWELFDEML 165

Query: 193 QLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHY 252
             G+V ++  YN LI+AC    DV K  ++  +M  + +  ++ TY T+I   C++    
Sbjct: 166 GRGMVPSVVTYNTLINACRHQGDVAKAWEVWDQMVARRIDPNVVTYTTMICALCEEDCIG 225

Query: 253 EALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLI 310
           +A  +   M+  G+ P++ TYN+L+    +   ++ A   + D+   G  PN V +TTLI
Sbjct: 226 DAEGLFLEMKEAGMRPNLYTYNALMSSHFKRDNIKHALVFYYDLLKCGLVPNDVIFTTLI 285

Query: 311 DGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIA 370
           DG C+AN + EA  +   M    V P V  YNS++    + G  ++A     E+  K + 
Sbjct: 286 DGLCQANRITEAKNIFLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIRKGLR 345

Query: 371 PDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL 430
           PD  TC+ ++   C  G    A +    M ++G+ L+   Y  LI  +CK+  +D A   
Sbjct: 346 PDEFTCSIVVRGLCDGGQMQVATRFLEVMQQSGIALNAAAYNVLIDEYCKSGNLDEALVT 405

Query: 431 LFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCK 490
              M + G  P+  +YS L+DG+      E  + +  E V++G+  +V  Y ALI    K
Sbjct: 406 CTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIHGHAK 465

Query: 491 KEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
              +D A  L   M+  GI  +++  + L
Sbjct: 466 NGDMDAAFWLQKEMEEKGIYSNAITVSVL 494



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 122/455 (26%), Positives = 200/455 (43%), Gaps = 70/455 (15%)

Query: 38  LTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSA 97
           + S   +  L+N   C H   ++ A+  W +        ++ ++ TMI  L +      A
Sbjct: 170 VPSVVTYNTLIN--ACRHQGDVAKAWEVWDQMVARRIDPNVVTYTTMICALCEEDCIGDA 227

Query: 98  QNM---LEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFD 154
           + +   +++  +R  L T    NAL+  H   D   H L    +FY            +D
Sbjct: 228 EGLFLEMKEAGMRPNLYT---YNALMSSHFKRDNIKHAL----VFY------------YD 268

Query: 155 QMRVHNLMPHLHACTVLLNSLAK-DRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKS 213
            ++   L+P+    T L++ L + +R+T+    ++  M +  V   + +YN LIH   +S
Sbjct: 269 LLKC-GLVPNDVIFTTLIDGLCQANRITE-AKNIFLDMPRYEVAPTVPVYNSLIHGAFRS 326

Query: 214 SDVDKVEKLLCEMEFKDVRADLFT-----------------------------------Y 238
               +      E+  K +R D FT                                   Y
Sbjct: 327 GYAQEALAFFQEIIRKGLRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQSGIALNAAAY 386

Query: 239 NTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI-- 296
           N LI  YCK G   EAL    RM   G+ P++VTY+SLI G  + G M  A  ++ ++  
Sbjct: 387 NVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVA 446

Query: 297 KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRD 356
           KG  PN VTYT LI G+ +  D++ A  L++ M  KG+Y   +T + ++  LC+E R++D
Sbjct: 447 KGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLVDGLCRENRVQD 506

Query: 357 ANRLLNEMNEKKIAPDN------VTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
           A R + E + +K +  N      VT  TLI      G    A    + M ++G++ D+FT
Sbjct: 507 AVRFIMEYSGQKKSEKNPSIANSVTYMTLIYGLYIDGQYNEACHFFSCMRDSGMVPDRFT 566

Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
           Y  +I G C    +  A  L   M+  G  P+ C+
Sbjct: 567 YTLVIRGLCMLGYVLNAMMLYADMVKVGVKPTKCA 601



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 77/277 (27%), Positives = 133/277 (48%), Gaps = 5/277 (1%)

Query: 253 EALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLI 310
           EAL+V  R+ RE   P +   N+++ G  +   +     LF ++  +G  P+ VTY TLI
Sbjct: 124 EALSVFGRL-RE--LPALPACNAILDGLVKAHMLARVWELFDEMLGRGMVPSVVTYNTLI 180

Query: 311 DGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIA 370
           +      D+ +A  + + M A+ + P VVTY +++  LC+E  I DA  L  EM E  + 
Sbjct: 181 NACRHQGDVAKAWEVWDQMVARRIDPNVVTYTTMICALCEEDCIGDAEGLFLEMKEAGMR 240

Query: 371 PDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL 430
           P+  T N L++++ K  +   A+     +L+ GL+ +   +  LI G C+A  +  AK +
Sbjct: 241 PNLYTYNALMSSHFKRDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCQANRITEAKNI 300

Query: 431 LFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCK 490
              M     +P+   Y+ L+ G       +  L    E + +GL  D      ++R  C 
Sbjct: 301 FLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIRKGLRPDEFTCSIVVRGLCD 360

Query: 491 KEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
             ++  A R   +MQ +GI  ++  Y  L   Y ++G
Sbjct: 361 GGQMQVATRFLEVMQQSGIALNAAAYNVLIDEYCKSG 397



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 102/221 (46%), Gaps = 7/221 (3%)

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
           RLRE+       P +   N+IL  L K   +     L +EM  + + P  VT NTLINA 
Sbjct: 131 RLREL-------PALPACNAILDGLVKAHMLARVWELFDEMLGRGMVPSVVTYNTLINAC 183

Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY 443
              GD A A +V ++M+   +  +  TY  +I   C+   +  A+ L   M +AG  P+ 
Sbjct: 184 RHQGDVAKAWEVWDQMVARRIDPNVVTYTTMICALCEEDCIGDAEGLFLEMKEAGMRPNL 243

Query: 444 CSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNL 503
            +Y+ L+  +  ++N +  L    + +  GL  +  ++  LI   C+  ++  A+ +F  
Sbjct: 244 YTYNALMSSHFKRDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCQANRITEAKNIFLD 303

Query: 504 MQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL 544
           M    +     +Y SL +  +R+G  +       ++ R+ L
Sbjct: 304 MPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIRKGL 344


>gi|147784915|emb|CAN72973.1| hypothetical protein VITISV_019486 [Vitis vinifera]
          Length = 550

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 136/505 (26%), Positives = 236/505 (46%), Gaps = 8/505 (1%)

Query: 66  WAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDD 125
           +  SA+   +H+ QS   ++H+L  +  F  +Q++L K+      S+    ++L      
Sbjct: 13  FTSSALQGXQHTHQSISFILHLLISSNLFSHSQSLLLKLISGQISSSSFTPSSLFHELTQ 72

Query: 126 PDGNS---HVLSWLVIFYANLK--MTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRL 180
           P  +S   HVL    I  A+++  + +  L   +QM    L+P  +    LL  L K   
Sbjct: 73  PHLDSFPTHVLIHEAIINAHVRSQLPEQALFYXNQMIGRGLVPGSNTFNNLLILLIKSNF 132

Query: 181 TDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNT 240
            +  W+V+ +  +  V  +++ + ++I  CC+   +DK  ++L +ME   +  ++  Y T
Sbjct: 133 FEKAWRVFNE-TKGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTT 191

Query: 241 LIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--G 298
           LI   CK G       +  +M    +  +  TY  LI+GF + G  ++   L+  +K  G
Sbjct: 192 LIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTG 251

Query: 299 ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDAN 358
             PN  TY ++I   C    L  A  L + M  +GV   VVTYN+++  LC+E R+ +A 
Sbjct: 252 IVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAE 311

Query: 359 RLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGF 418
           RL+  M    ++P+ ++ NTLI+ YC IG+   A  + N+M  +G      TY  LI GF
Sbjct: 312 RLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGF 371

Query: 419 CKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDV 478
            +AK      +++  M   G SPS  +Y+ L+D     +N E   ++       GL  D+
Sbjct: 372 SEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADI 431

Query: 479 SVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDD 538
            +Y  LI   C    +  A +LF  +    +  + VIY ++ Y Y + G       +L +
Sbjct: 432 YIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKE 491

Query: 539 MYRRRLMITLKIYRSFSASYAKDNE 563
           M    ++  +  Y S      KD +
Sbjct: 492 MGENGMVPNVASYNSTIXILCKDEK 516



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 110/358 (30%), Positives = 183/358 (51%), Gaps = 2/358 (0%)

Query: 149 GLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIH 208
           G +V  QM    L P++   T L++   K+   +   +++ KM +L VVAN + Y VLI+
Sbjct: 170 GFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLIN 229

Query: 209 ACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISP 268
              K        +L  +M+   +  +++TYN++I   C  G    A  + D M   G++ 
Sbjct: 230 GFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVAC 289

Query: 269 DIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLR 326
           ++VTYN+LI G C+E R+ EA RL   +K  G +PN ++Y TLIDGYC   +L++A  L 
Sbjct: 290 NVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLF 349

Query: 327 EVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKI 386
             M + G  P + TYN ++    +         ++ EM  + ++P  VT   L++A  + 
Sbjct: 350 NQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRS 409

Query: 387 GDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSY 446
            +   A ++ + M +AGL+ D + Y  LIHG C   +M  A +L   + +    P+   Y
Sbjct: 410 DNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIY 469

Query: 447 SWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
           + ++ GYC + +    L+LL E    G+  +V+ Y + I   CK EK   A+ L   M
Sbjct: 470 NTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIXILCKDEKWTEAEVLLKDM 527



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 51/172 (29%), Positives = 88/172 (51%), Gaps = 3/172 (1%)

Query: 128 GNSHVLSWLVIFYANLKMTQDGLQVFD---QMRVHNLMPHLHACTVLLNSLAKDRLTDMV 184
           G S  L+   I  A     ++   V D   +M    L P     T+L+++L +    +  
Sbjct: 356 GQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKA 415

Query: 185 WKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIAL 244
           +++Y  M + G+VA+I++Y VLIH  C   D+ +  KL   ++   ++ +   YNT+I  
Sbjct: 416 FQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYG 475

Query: 245 YCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI 296
           YCK+G  Y AL +   M   G+ P++ +YNS I   C++ +  EA  L +D+
Sbjct: 476 YCKEGSSYRALRLLKEMGENGMVPNVASYNSTIXILCKDEKWTEAEVLLKDM 527


>gi|242047600|ref|XP_002461546.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
 gi|241924923|gb|EER98067.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
          Length = 532

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 129/411 (31%), Positives = 200/411 (48%), Gaps = 9/411 (2%)

Query: 144 KMTQDGLQ-VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG--VVANI 200
           K T D +  V  +M      P + + + LL  L  ++  +   ++   M + G     ++
Sbjct: 62  KRTSDAMNIVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDV 121

Query: 201 HLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDR 260
             Y+ +IH   K  DV K   L C+M    +  ++ T N++I   CK     +A AV  +
Sbjct: 122 VSYSTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQ 181

Query: 261 MEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRAND 318
           M  E I P+  TYNSLIHG+   G+  EA R+ +++   G  PN VTY  LID  C++  
Sbjct: 182 MIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGF 241

Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT 378
             EA  +   M   G  P   TY S+L     EG + + N + + M +  +  ++ T + 
Sbjct: 242 HAEAREIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSI 301

Query: 379 LINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAG 438
            I AYCK G    A     +M + G M D  TY  +I G CK   +D A      M+D G
Sbjct: 302 EIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDG 361

Query: 439 FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQ 498
            SP+  +++ L+ G+      E   +L  E + RG+  DV+++ A+I R  K+ KV  AQ
Sbjct: 362 LSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQ 421

Query: 499 RLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLK 549
           +LF+LM   G   + V Y ++ + Y+ AGE      +LDDM    L+I LK
Sbjct: 422 KLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDM----LLIGLK 468



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 138/531 (25%), Positives = 227/531 (42%), Gaps = 53/531 (9%)

Query: 27  AKLLNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIH 86
           AK + P+IA+         +L++   CC    L+  F    +      +    +   ++ 
Sbjct: 6   AKKVAPDIAT-------FGILISC--CCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLR 56

Query: 87  ILTKNKHFKSAQN-----MLEKIALRDFLSTPSVLNALVK----------IH----DDPD 127
            L   K    A N     M E     D  S  ++L  L            IH    D  +
Sbjct: 57  TLCAKKRTSDAMNIVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDN 116

Query: 128 GNSHVLSWLVIFYANLKMTQDG--LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVW 185
               V+S+  + +   K    G    +F +M  H + P++  C  +++ L K +  D   
Sbjct: 117 CPPDVVSYSTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAE 176

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
            V ++M+   ++ N   YN LIH    S    +  ++L EM     R ++ TYN LI   
Sbjct: 177 AVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCL 236

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI---KGATPN 302
           CK G H EA  + + M + G  PD  TY SL+HG+  EG + E   + +D+    G   N
Sbjct: 237 CKSGFHAEAREIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNV-KDLMVQNGMRSN 295

Query: 303 HVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLN 362
           H T++  I  YC+   L+EA      M   G  P +VTY +++  LCK GR+ DA     
Sbjct: 296 HHTFSIEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFC 355

Query: 363 EMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAK 422
           +M +  ++P+ +T  TLI+ +   G    A ++   M++ G+  D   + A+I    K  
Sbjct: 356 QMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEG 415

Query: 423 EMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE-------------- 468
           ++  A++L   M  AG  P+  SY+ ++ GY        ++KLLD+              
Sbjct: 416 KVTEAQKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFN 475

Query: 469 -----FVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSV 514
                 VS GL  DV   + LI   C+  +++    LF  M G     D++
Sbjct: 476 TLLDGMVSMGLKPDVDTCKTLIDSCCEDGRIEDILTLFREMLGKADKTDTI 526



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 76/281 (27%), Positives = 130/281 (46%), Gaps = 21/281 (7%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           ++F+ M      P       LL+  A +     +  V   MVQ G+ +N H +++ I+A 
Sbjct: 247 EIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAY 306

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           CK   +D+      +M+      D+ TY T+I   CK G   +A++   +M  +G+SP+I
Sbjct: 307 CKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNI 366

Query: 271 VTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
           +T+ +LIHGF   G+  +A  LF ++  +G  P+   +T +ID   +   + EA +L ++
Sbjct: 367 ITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDL 426

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDA-------------------NRLLNEMNEKKI 369
           M   G  P VV+YN+++      G + +                    N LL+ M    +
Sbjct: 427 MPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGMVSMGL 486

Query: 370 APDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
            PD  TC TLI++ C+ G     + +   ML      D  T
Sbjct: 487 KPDVDTCKTLIDSCCEDGRIEDILTLFREMLGKADKTDTIT 527



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 111/251 (44%), Gaps = 18/251 (7%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N H  S  +  Y       +    F +M+    MP +   T +++ L K    D     +
Sbjct: 295 NHHTFSIEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRF 354

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
            +M+  G+  NI  +  LIH        +K E+L  EM  + +  D+  +  +I    K+
Sbjct: 355 CQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKE 414

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTY 306
           G   EA  + D M R G  P++V+YN++IHG+   G + E  +L  D  + G  P  VT+
Sbjct: 415 GKVTEAQKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTF 474

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
            TL+DG                M + G+ P V T  +++   C++GRI D   L  EM  
Sbjct: 475 NTLLDG----------------MVSMGLKPDVDTCKTLIDSCCEDGRIEDILTLFREMLG 518

Query: 367 KKIAPDNVTCN 377
           K    D +T N
Sbjct: 519 KADKTDTITEN 529



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 69/290 (23%), Positives = 117/290 (40%), Gaps = 5/290 (1%)

Query: 297 KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRD 356
           K   P+  T+  LI   C A  L         +   G+    V +  +LR LC + R  D
Sbjct: 7   KKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKKRTSD 66

Query: 357 A-NRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAG--LMLDQFTYKA 413
           A N +L  M E    PD  + +TL+   C       A ++ + M E G     D  +Y  
Sbjct: 67  AMNIVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYST 126

Query: 414 LIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
           +IHGF K  ++  A  L   MLD G  P+  + + ++DG C     +    +L + +   
Sbjct: 127 VIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEH 186

Query: 474 LCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACS 533
           +  + + Y +LI  +    +   A R+   M  +G   + V Y  L     ++G      
Sbjct: 187 IMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAR 246

Query: 534 DILDDMYRRRLMITLKIYRSFSASYAKDNEILDL--FWSHVVDRGLMSKH 581
           +I + M +         Y S    YA +  ++++      +V  G+ S H
Sbjct: 247 EIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNH 296


>gi|124360736|gb|ABN08713.1| Pentatricopeptide repeat [Medicago truncatula]
          Length = 479

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 126/484 (26%), Positives = 216/484 (44%), Gaps = 62/484 (12%)

Query: 63  FFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKI 122
           F    E     ++H   +   MIH L     F+ A+ MLE++   D   T  V   + + 
Sbjct: 35  FDSATEEYSNGFRHDHNTFGAMIHRLVSVNQFRPAEGMLERMKQEDCEVTEDVFLTICR- 93

Query: 123 HDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTD 182
                            Y  +    D ++VF +M    + P   +   + + L ++    
Sbjct: 94  ----------------GYGRVHRPLDAIRVFHKMEDFQVKPTQKSYLTVFDILVEENHVK 137

Query: 183 MVWKVYKKMVQLGVVANIHLYNVLIHACCKSSD-VDKVEKLLCEMEFKDVRADLFTYNTL 241
                YK+M + G+   +   N+LI A CK+ + V+   +L  EM  +  + D +TY TL
Sbjct: 138 RAIGFYKEMREKGIPPTVVSLNILIKALCKNEETVESAFRLFREMPNRGCQPDSYTYGTL 197

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGA 299
           I   CK G   +A  + D ME +G+SP +V+Y SLIHG C+   + EA  L  +  I G 
Sbjct: 198 INGLCKLGKISQAKELLDEMEEKGLSPSVVSYTSLIHGLCQSNNLDEAIELLEEMIINGI 257

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
            PN  TY++L+DG C++    +A+ L EVM  + + P +VTY++++  LCKEG+ R+A  
Sbjct: 258 EPNVFTYSSLMDGLCKSGHSSQAMELLEVMVRRRLLPNMVTYSTLINGLCKEGKHREAVE 317

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
           +L+ M  + + PD                             AG+      Y  +I G C
Sbjct: 318 ILDRMRLQGLKPD-----------------------------AGM------YGRIISGLC 342

Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSW-------LVDGYCNKNNEEALLKLLDEFVSR 472
            A     A   +  M   G SP+  S+++       +V G CN  +     +L     +R
Sbjct: 343 AACNYQEAANFIDEMALGGISPNRASWTFHVKMHNMVVQGLCNNVDPTRAFQLYLSMRTR 402

Query: 473 GLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKAC 532
           G+ V++  +  L++ FCK+  ++ A R+   M  +G + D  ++  L    W   + +  
Sbjct: 403 GISVEIGTFDCLVKCFCKRGDLNKAARILEEMILDGCIPDEGMWNVLMCGLWDRKKVRET 462

Query: 533 SDIL 536
           +++L
Sbjct: 463 TELL 466



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 90/311 (28%), Positives = 151/311 (48%), Gaps = 3/311 (0%)

Query: 232 RADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARR 291
           R D  T+  +I           A  + +RM++E        + ++  G+ R  R  +A R
Sbjct: 47  RHDHNTFGAMIHRLVSVNQFRPAEGMLERMKQEDCEVTEDVFLTICRGYGRVHRPLDAIR 106

Query: 292 LFRDIKG--ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLC 349
           +F  ++     P   +Y T+ D     N ++ A+   + M  KG+ P VV+ N +++ LC
Sbjct: 107 VFHKMEDFQVKPTQKSYLTVFDILVEENHVKRAIGFYKEMREKGIPPTVVSLNILIKALC 166

Query: 350 K-EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ 408
           K E  +  A RL  EM  +   PD+ T  TLIN  CK+G  + A ++ + M E GL    
Sbjct: 167 KNEETVESAFRLFREMPNRGCQPDSYTYGTLINGLCKLGKISQAKELLDEMEEKGLSPSV 226

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
            +Y +LIHG C++  +D A ELL  M+  G  P+  +YS L+DG C   +    ++LL+ 
Sbjct: 227 VSYTSLIHGLCQSNNLDEAIELLEEMIINGIEPNVFTYSSLMDGLCKSGHSSQAMELLEV 286

Query: 469 FVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
            V R L  ++  Y  LI   CK+ K   A  + + M+  G+  D+ +Y  +      A  
Sbjct: 287 MVRRRLLPNMVTYSTLINGLCKEGKHREAVEILDRMRLQGLKPDAGMYGRIISGLCAACN 346

Query: 529 PKACSDILDDM 539
            +  ++ +D+M
Sbjct: 347 YQEAANFIDEM 357



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 96/374 (25%), Positives = 173/374 (46%), Gaps = 25/374 (6%)

Query: 75  KHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLS 134
           K + +S+ T+  IL +  H K A    +++  +    T   LN L+K             
Sbjct: 117 KPTQKSYLTVFDILVEENHVKRAIGFYKEMREKGIPPTVVSLNILIKA------------ 164

Query: 135 WLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQL 194
                  N +  +   ++F +M      P  +    L+N L K        ++  +M + 
Sbjct: 165 ----LCKNEETVESAFRLFREMPNRGCQPDSYTYGTLINGLCKLGKISQAKELLDEMEEK 220

Query: 195 GVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEA 254
           G+  ++  Y  LIH  C+S+++D+  +LL EM    +  ++FTY++L+   CK G   +A
Sbjct: 221 GLSPSVVSYTSLIHGLCQSNNLDEAIELLEEMIINGIEPNVFTYSSLMDGLCKSGHSSQA 280

Query: 255 LAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDG 312
           + + + M R  + P++VTY++LI+G C+EG+ REA  +   ++  G  P+   Y  +I G
Sbjct: 281 MELLEVMVRRRLLPNMVTYSTLINGLCKEGKHREAVEILDRMRLQGLKPDAGMYGRIISG 340

Query: 313 YCRANDLEEALRLREVMAAKGVYPG-------VVTYNSILRKLCKEGRIRDANRLLNEMN 365
            C A + +EA    + MA  G+ P        V  +N +++ LC       A +L   M 
Sbjct: 341 LCAACNYQEAANFIDEMALGGISPNRASWTFHVKMHNMVVQGLCNNVDPTRAFQLYLSMR 400

Query: 366 EKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMD 425
            + I+ +  T + L+  +CK GD   A ++   M+  G + D+  +  L+ G    K++ 
Sbjct: 401 TRGISVEIGTFDCLVKCFCKRGDLNKAARILEEMILDGCIPDEGMWNVLMCGLWDRKKVR 460

Query: 426 IAKELLFGMLDAGF 439
              ELL   L   F
Sbjct: 461 ETTELLVAELKQKF 474



 Score = 88.6 bits (218), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 78/310 (25%), Positives = 119/310 (38%), Gaps = 42/310 (13%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           G   D  T+ ++IH      + R A  +   +K          + T+  GY R +   +A
Sbjct: 45  GFRHDHNTFGAMIHRLVSVNQFRPAEGMLERMKQEDCEVTEDVFLTICRGYGRVHRPLDA 104

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
           +R+   M    V P   +Y ++   L +E  ++ A     EM EK I P  V+ N LI A
Sbjct: 105 IRVFHKMEDFQVKPTQKSYLTVFDILVEENHVKRAIGFYKEMREKGIPPTVVSLNILIKA 164

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
            CK  +T  +                                  A  L   M + G  P 
Sbjct: 165 LCKNEETVES----------------------------------AFRLFREMPNRGCQPD 190

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y  L++G C         +LLDE   +GL   V  Y +LI   C+   +D A  L  
Sbjct: 191 SYTYGTLINGLCKLGKISQAKELLDEMEEKGLSPSVVSYTSLIHGLCQSNNLDEAIELLE 250

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDN 562
            M  NGI  +   Y+SL     ++G      ++L+ M RRRL+  +  Y +      K+ 
Sbjct: 251 EMIINGIEPNVFTYSSLMDGLCKSGHSSQAMELLEVMVRRRLLPNMVTYSTLINGLCKEG 310

Query: 563 ------EILD 566
                 EILD
Sbjct: 311 KHREAVEILD 320


>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 557

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 110/393 (27%), Positives = 195/393 (49%), Gaps = 9/393 (2%)

Query: 201 HLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDR 260
           + YN LI   C          +L +M  +    D+ TY  L+   CK+  + +A+ + D 
Sbjct: 157 YTYNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDE 216

Query: 261 MEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRAND 318
           M  +G +PDI+TYN +++G C+EGR+ +A    + +   G  PN V+Y  ++ G C A  
Sbjct: 217 MRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAER 276

Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT 378
            E+A +L   M+ KG  P VVT+N ++  LC+ G +  A  +L+++ +    P++++ N 
Sbjct: 277 WEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNP 336

Query: 379 LINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAG 438
           +++A+CK      AM     M+  G   D  +Y  L+   C+  E+D A ELL  + D G
Sbjct: 337 ILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKG 396

Query: 439 FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQ 498
            +P   SY+ ++DG       +  L+LL+E V++GL  D+  Y  +    C++++++ A 
Sbjct: 397 CTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAI 456

Query: 499 RLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYR------ 552
           R F  +Q  GI  ++V+Y ++     +  E     D+   M     M     Y       
Sbjct: 457 RAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGL 516

Query: 553 SFSASYAKDNEILDLFWSH-VVDRGLMSKHIFK 584
           ++     +  E+L    S  VV +GL++K   +
Sbjct: 517 TYEGLVKEARELLGELCSRGVVSKGLINKAAIR 549



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 102/380 (26%), Positives = 196/380 (51%), Gaps = 14/380 (3%)

Query: 117 NALVKIHD------DPDGNSHVLSWLVIFYANLKMT--QDGLQVFDQMRVHNLMPHLHAC 168
           NALV + D       PD    V+++ ++  A  K +  +  +++ D+MR     P +   
Sbjct: 174 NALVVLDDMLRRGCVPD----VVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITY 229

Query: 169 TVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEF 228
            V++N + ++   D   +  K +   G   N   YN+++   C +   +  EKL+ EM  
Sbjct: 230 NVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQ 289

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
           K    ++ T+N LI+  C++G+   A+ V D++ + G +P+ ++YN ++H FC++ +M  
Sbjct: 290 KGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDR 349

Query: 289 ARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILR 346
           A      +  +G  P+ V+Y TL+   CR  +++ A+ L   +  KG  P +++YN+++ 
Sbjct: 350 AMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVID 409

Query: 347 KLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLML 406
            L K G+ ++A  LLNEM  K + PD +T +T+ +  C+      A++   ++ + G+  
Sbjct: 410 GLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRP 469

Query: 407 DQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLL 466
           +   Y A++ G CK +E   A +L   M+  G  P+  +Y+ L++G   +   +   +LL
Sbjct: 470 NTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGLTYEGLVKEARELL 529

Query: 467 DEFVSRGLCVDVSVYRALIR 486
            E  SRG+     + +A IR
Sbjct: 530 GELCSRGVVSKGLINKAAIR 549



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 101/393 (25%), Positives = 181/393 (46%), Gaps = 4/393 (1%)

Query: 125 DPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMV 184
           +PD  S+  + L+        T + L V D M     +P +   T+LL +  K       
Sbjct: 153 EPD--SYTYNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQA 210

Query: 185 WKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIAL 244
            K+  +M   G   +I  YNV+++  C+   VD   + L  +       +  +YN ++  
Sbjct: 211 MKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKG 270

Query: 245 YCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPN 302
            C      +A  +   M ++G  P++VT+N LI   CR G +  A  +   I   G TPN
Sbjct: 271 LCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPN 330

Query: 303 HVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLN 362
            ++Y  ++  +C+   ++ A+   E+M ++G YP +V+YN++L  LC+ G +  A  LL+
Sbjct: 331 SLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLH 390

Query: 363 EMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAK 422
           ++ +K   P  ++ NT+I+   K G T  A+++ N M+  GL  D  TY  +  G C+  
Sbjct: 391 QLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCRED 450

Query: 423 EMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYR 482
            ++ A      + D G  P+   Y+ ++ G C +      + L    +S G   + S Y 
Sbjct: 451 RIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYT 510

Query: 483 ALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVI 515
            LI     +  V  A+ L   +   G++   +I
Sbjct: 511 ILIEGLTYEGLVKEARELLGELCSRGVVSKGLI 543



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 105/382 (27%), Positives = 179/382 (46%), Gaps = 2/382 (0%)

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
           P  +    L+  L     T     V   M++ G V ++  Y +L+ A CK S   +  KL
Sbjct: 154 PDSYTYNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKL 213

Query: 223 LCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR 282
           L EM  K    D+ TYN ++   C++G   +A+     +   G  P+ V+YN ++ G C 
Sbjct: 214 LDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCT 273

Query: 283 EGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVT 340
             R  +A +L  ++  KG  PN VT+  LI   CR   +E A+ + + +   G  P  ++
Sbjct: 274 AERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLS 333

Query: 341 YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML 400
           YN IL   CK+ ++  A   +  M  +   PD V+ NTL+ A C+ G+  +A+++ +++ 
Sbjct: 334 YNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLK 393

Query: 401 EAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEE 460
           + G      +Y  +I G  KA +   A ELL  M+  G  P   +YS +  G C ++  E
Sbjct: 394 DKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIE 453

Query: 461 ALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLA 520
             ++   +    G+  +  +Y A++   CK+ +   A  LF  M  NG + +   YT L 
Sbjct: 454 EAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILI 513

Query: 521 YAYWRAGEPKACSDILDDMYRR 542
                 G  K   ++L ++  R
Sbjct: 514 EGLTYEGLVKEARELLGELCSR 535



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 105/374 (28%), Positives = 172/374 (45%), Gaps = 10/374 (2%)

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           +  D+++  +L+  M   +  A       LI   C  G   EA  V    E     PD++
Sbjct: 71  RRGDLEEALRLVESMSGLEPSAAPGPCAALIKKLCASGRTAEARRVLAACE-----PDVM 125

Query: 272 TYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAA 331
            YN+++ G+C  G++  ARRL  D+    P+  TY TLI G C       AL + + M  
Sbjct: 126 AYNAMVAGYCVTGQLDAARRLVADMP-MEPDSYTYNTLIRGLCGRGRTGNALVVLDDMLR 184

Query: 332 KGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTAS 391
           +G  P VVTY  +L   CK    + A +LL+EM  K  APD +T N ++N  C+ G    
Sbjct: 185 RGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDD 244

Query: 392 AMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVD 451
           A++    +   G   +  +Y  ++ G C A+  + A++L+  M   G+ P+  +++ L+ 
Sbjct: 245 AIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLIS 304

Query: 452 GYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILG 511
             C +   E  +++LD+    G   +   Y  ++  FCK++K+D A     LM   G   
Sbjct: 305 FLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYP 364

Query: 512 DSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFS---ASYAKDNEILDLF 568
           D V Y +L  A  R GE  A  ++L  +  +     L  Y +         K  E L+L 
Sbjct: 365 DIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELL 424

Query: 569 WSHVVDRGLMSKHI 582
            + +V +GL    I
Sbjct: 425 -NEMVTKGLQPDII 437



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/224 (29%), Positives = 105/224 (46%), Gaps = 16/224 (7%)

Query: 299 ATPNHVTYTTL----IDGYCRANDLEEALRLREVMAA--KGVYPGVVTYNSILRKLCKEG 352
           A+PN V +  +    + G  R  DLEEALRL E M+       PG     ++++KLC  G
Sbjct: 51  ASPNAVPHRAVSNDRLRGLVRRGDLEEALRLVESMSGLEPSAAPGPCA--ALIKKLCASG 108

Query: 353 RIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYK 412
           R  +A R+L         PD +  N ++  YC  G   +A ++   M    +  D +TY 
Sbjct: 109 RTAEARRVL-----AACEPDVMAYNAMVAGYCVTGQLDAARRLVADM---PMEPDSYTYN 160

Query: 413 ALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSR 472
            LI G C       A  +L  ML  G  P   +Y+ L++  C ++  +  +KLLDE  ++
Sbjct: 161 TLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAK 220

Query: 473 GLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIY 516
           G   D+  Y  ++   C++ +VD A      +  +G   ++V Y
Sbjct: 221 GCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSY 264


>gi|297610360|ref|NP_001064440.2| Os10g0363500 [Oryza sativa Japonica Group]
 gi|110288965|gb|AAP53322.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255679339|dbj|BAF26354.2| Os10g0363500 [Oryza sativa Japonica Group]
          Length = 512

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 107/331 (32%), Positives = 179/331 (54%), Gaps = 4/331 (1%)

Query: 126 PDGNS-HVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMV 184
           PDG +   L  L    A  K        F  MR H L+P + +C V +++    R  ++ 
Sbjct: 140 PDGGAVPALDVLFSVCARGKKLSLATLAFRAMRAHGLLPRVVSCNVFISAALGLRRPEIA 199

Query: 185 WKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIAL 244
              +++M +  +  NI+  N+++ A C         ++L +M    V     ++NTLIA 
Sbjct: 200 LSFFREMRRCRISPNIYTANMVLRAFCDLGRTADAAEVLDKMPEWGVGRTTVSFNTLIAA 259

Query: 245 YCKKGMHY-EALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATP 301
           YC+ G+    AL ++ +ME+EG+ PD+VTY+++IHG C+EGRM +A ++  +  +KG  P
Sbjct: 260 YCRDGVDAGPALQLKMKMEQEGLVPDVVTYDTIIHGLCKEGRMGKANQVLSEMRVKGVMP 319

Query: 302 NHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLL 361
           N VTY TLI GY    D   A R+ E M    V   +VTYN+++  LC EG+++    LL
Sbjct: 320 NTVTYNTLIHGYVALGDNAMAGRVHEEMVKNRVELDIVTYNALILGLCNEGKMKKVEHLL 379

Query: 362 NEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKA 421
            E++  K+ P+  T + LI  +CK+ ++  A+++ N M ++G   +  TYK +I  FCK 
Sbjct: 380 RELDRAKLEPNASTFSALIVGWCKMQNSERALQLLNVMKKSGFHPNYTTYKMVISSFCKN 439

Query: 422 KEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
           K+++ A +++  ML    +P     +   DG
Sbjct: 440 KDLEGAVDVMGDMLGRCIAPDKALLNEFFDG 470



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 97/276 (35%), Positives = 145/276 (52%), Gaps = 3/276 (1%)

Query: 254 ALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLID 311
           AL+    M R  ISP+I T N ++  FC  GR  +A  +   +   G     V++ TLI 
Sbjct: 199 ALSFFREMRRCRISPNIYTANMVLRAFCDLGRTADAAEVLDKMPEWGVGRTTVSFNTLIA 258

Query: 312 GYCRAN-DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIA 370
            YCR   D   AL+L+  M  +G+ P VVTY++I+  LCKEGR+  AN++L+EM  K + 
Sbjct: 259 AYCRDGVDAGPALQLKMKMEQEGLVPDVVTYDTIIHGLCKEGRMGKANQVLSEMRVKGVM 318

Query: 371 PDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL 430
           P+ VT NTLI+ Y  +GD A A +V   M++  + LD  TY ALI G C   +M   + L
Sbjct: 319 PNTVTYNTLIHGYVALGDNAMAGRVHEEMVKNRVELDIVTYNALILGLCNEGKMKKVEHL 378

Query: 431 LFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCK 490
           L  +  A   P+  ++S L+ G+C   N E  L+LL+     G   + + Y+ +I  FCK
Sbjct: 379 LRELDRAKLEPNASTFSALIVGWCKMQNSERALQLLNVMKKSGFHPNYTTYKMVISSFCK 438

Query: 491 KEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRA 526
            + ++ A  +   M G  I  D  +        W+A
Sbjct: 439 NKDLEGAVDVMGDMLGRCIAPDKALLNEFFDGLWKA 474



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 92/355 (25%), Positives = 163/355 (45%), Gaps = 4/355 (1%)

Query: 167 ACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEM 226
           A  VL +  A+ +   +    ++ M   G++  +   NV I A       +       EM
Sbjct: 147 ALDVLFSVCARGKKLSLATLAFRAMRAHGLLPRVVSCNVFISAALGLRRPEIALSFFREM 206

Query: 227 EFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRM 286
               +  +++T N ++  +C  G   +A  V D+M   G+    V++N+LI  +CR+G  
Sbjct: 207 RRCRISPNIYTANMVLRAFCDLGRTADAAEVLDKMPEWGVGRTTVSFNTLIAAYCRDGVD 266

Query: 287 REAR---RLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNS 343
                  ++  + +G  P+ VTY T+I G C+   + +A ++   M  KGV P  VTYN+
Sbjct: 267 AGPALQLKMKMEQEGLVPDVVTYDTIIHGLCKEGRMGKANQVLSEMRVKGVMPNTVTYNT 326

Query: 344 ILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAG 403
           ++      G    A R+  EM + ++  D VT N LI   C  G       +   +  A 
Sbjct: 327 LIHGYVALGDNAMAGRVHEEMVKNRVELDIVTYNALILGLCNEGKMKKVEHLLRELDRAK 386

Query: 404 LMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALL 463
           L  +  T+ ALI G+CK +  + A +LL  M  +GF P+Y +Y  ++  +C   + E  +
Sbjct: 387 LEPNASTFSALIVGWCKMQNSERALQLLNVMKKSGFHPNYTTYKMVISSFCKNKDLEGAV 446

Query: 464 KLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTS 518
            ++ + + R +  D ++         K +K+  A+ L +L  G   + D V YT 
Sbjct: 447 DVMGDMLGRCIAPDKALLNEFFDGLWKAKKLHLAENLRSLNNGLKFIPD-VYYTG 500



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 83/315 (26%), Positives = 131/315 (41%), Gaps = 48/315 (15%)

Query: 293 FRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
           FR ++  G  P  V+    I         E AL     M    + P + T N +LR  C 
Sbjct: 168 FRAMRAHGLLPRVVSCNVFISAALGLRRPEIALSFFREMRRCRISPNIYTANMVLRAFCD 227

Query: 351 EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG-DTASAMKVKNRMLEAGLMLDQF 409
            GR  DA  +L++M E  +    V+ NTLI AYC+ G D   A+++K +M + GL+ D  
Sbjct: 228 LGRTADAAEVLDKMPEWGVGRTTVSFNTLIAAYCRDGVDAGPALQLKMKMEQEGLVPDVV 287

Query: 410 TYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGY---------------- 453
           TY  +IHG CK   M  A ++L  M   G  P+  +Y+ L+ GY                
Sbjct: 288 TYDTIIHGLCKEGRMGKANQVLSEMRVKGVMPNTVTYNTLIHGYVALGDNAMAGRVHEEM 347

Query: 454 -------------------CNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKV 494
                              CN+   + +  LL E     L  + S + ALI  +CK +  
Sbjct: 348 VKNRVELDIVTYNALILGLCNEGKMKKVEHLLRELDRAKLEPNASTFSALIVGWCKMQNS 407

Query: 495 DYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSF 554
           + A +L N+M+ +G   +   Y  +  ++ +  + +   D++ DM          + R  
Sbjct: 408 ERALQLLNVMKKSGFHPNYTTYKMVISSFCKNKDLEGAVDVMGDM----------LGRCI 457

Query: 555 SASYAKDNEILDLFW 569
           +   A  NE  D  W
Sbjct: 458 APDKALLNEFFDGLW 472



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 74/275 (26%), Positives = 111/275 (40%), Gaps = 46/275 (16%)

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMV-----WKVYKKMVQL 194
           + +L  T D  +V D+M    +       TV  N+L      D V      ++  KM Q 
Sbjct: 225 FCDLGRTADAAEVLDKMPEWGV----GRTTVSFNTLIAAYCRDGVDAGPALQLKMKMEQE 280

Query: 195 GVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEA 254
           G+V ++  Y+ +IH  CK   + K  ++L EM  K V  +  TYNTLI  Y   G +  A
Sbjct: 281 GLVPDVVTYDTIIHGLCKEGRMGKANQVLSEMRVKGVMPNTVTYNTLIHGYVALGDNAMA 340

Query: 255 LAVQDRMEREGISPDIVTYNSLI-----------------------------------HG 279
             V + M +  +  DIVTYN+LI                                    G
Sbjct: 341 GRVHEEMVKNRVELDIVTYNALILGLCNEGKMKKVEHLLRELDRAKLEPNASTFSALIVG 400

Query: 280 FCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPG 337
           +C+      A +L   +K  G  PN+ TY  +I  +C+  DLE A+ +   M  + + P 
Sbjct: 401 WCKMQNSERALQLLNVMKKSGFHPNYTTYKMVISSFCKNKDLEGAVDVMGDMLGRCIAPD 460

Query: 338 VVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPD 372
               N     L K  ++  A  L +  N  K  PD
Sbjct: 461 KALLNEFFDGLWKAKKLHLAENLRSLNNGLKFIPD 495


>gi|296088470|emb|CBI37461.3| unnamed protein product [Vitis vinifera]
          Length = 822

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 116/428 (27%), Positives = 214/428 (50%), Gaps = 4/428 (0%)

Query: 153 FDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCK 212
           FD M      P+L   + L+N   K+   D  + +Y  M++ G+V ++ +Y++LI+   +
Sbjct: 263 FDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFR 322

Query: 213 SSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVT 272
           +  +++   L      + V+ D+  +++++  Y + G   +A+ V  RM +EGISP++VT
Sbjct: 323 AGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVT 382

Query: 273 YNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMA 330
           Y+ LI+G CR GR+ EA  +F  I  +G  P+ +TY++LIDG+C++ +L +   L  +M 
Sbjct: 383 YSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIML 442

Query: 331 AKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTA 390
            KG  P VV  + ++  L ++G + +A R   +  ++ +  +N   N LI+   ++  T 
Sbjct: 443 RKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTR 502

Query: 391 SAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLV 450
             +K+   M    ++ D  TY  L+ G  +   +D A  L F +L  GFSP +  Y  L+
Sbjct: 503 DGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLI 562

Query: 451 DGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGIL 510
           DG+C K +    L++     S G+  D+ +Y  LI  F ++  V+    L   +   G+ 
Sbjct: 563 DGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLE 622

Query: 511 GDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD--LF 568
            D V Y ++   Y           + + +   R       +     +Y KD  + D  L 
Sbjct: 623 PDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLI 682

Query: 569 WSHVVDRG 576
           +S +++RG
Sbjct: 683 FSSMLERG 690



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 149/560 (26%), Positives = 246/560 (43%), Gaps = 92/560 (16%)

Query: 63  FFKWAESAVPNYKHSLQSHWTMIHILTK----NKHFKSAQNMLEKIALRDFLSTPSVLNA 118
           FF     + P+   +L +  T+I++  K    ++ F     M+EK  + D +    ++N 
Sbjct: 262 FFDMMVRSGPS--PNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILING 319

Query: 119 LVKIHDDPDGNS--------HVLSWLVIF------YANLKMTQDGLQVFDQMRVHNLMPH 164
           L +     +GNS         V   +VIF      Y  +      ++V+ +M    + P+
Sbjct: 320 LFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPN 379

Query: 165 LHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLC 224
           +   ++L+N L ++        V+ ++++ G+  ++  Y+ LI   CKS ++     L  
Sbjct: 380 VVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYG 439

Query: 225 EMEFKDVRADLFTYNTLIALYCKKGMHYEAL-------------------AVQD-----R 260
            M  K    D+   + LI    ++GM  EAL                   A+ D     +
Sbjct: 440 IMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLK 499

Query: 261 MEREGIS-----------PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYT 307
             R+G+            PD+VTY  L+ G   +GR+ EA  LF  +  KG +P+H+ Y 
Sbjct: 500 RTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYC 559

Query: 308 TLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEK 367
           TLIDG+C+  D    L++ ++M + G++P +  YN ++    +EG + +   LL E+ + 
Sbjct: 560 TLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKY 619

Query: 368 KIAPDNVTCNT-----------------------------------LINAYCKIGDTASA 392
            + PD VT NT                                   LI+AYCK G    A
Sbjct: 620 GLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDA 679

Query: 393 MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
           M + + MLE G   +  TY  LI G+ K +  + A EL   ML    SP+  SYS L+DG
Sbjct: 680 MLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDG 739

Query: 453 YCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGD 512
            C K   E         + R L  DV  Y  LIR +CK  ++  A  L++ M  NGI+ D
Sbjct: 740 LCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPD 799

Query: 513 SVIYTSLAYAYWRAGEPKAC 532
            ++  +LA   ++  + K C
Sbjct: 800 DLLQKALAEYGFQDSQAKNC 819



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 150/575 (26%), Positives = 244/575 (42%), Gaps = 81/575 (14%)

Query: 57  PSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVL 116
           P+ +  FF+WAE+ +    H +QS   + H+L +++ F  A  + +++     +     L
Sbjct: 69  PTSALRFFEWAENFL-GLCHPVQSFCGIAHVLLRHRMFDPATRVFDRM-----VGQFGNL 122

Query: 117 NALVKIHDD----PDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLL 172
             L + H          S V S+L+  Y    M    +  F  M    +    +A + +L
Sbjct: 123 EVLGEFHGSFRNYGSNPSTVYSFLLHCYCRNGMVDRAVDTFAWMSKMGVSISHYAASEML 182

Query: 173 NSLAKDRLTDMVWKVYKKMVQ-LGVVA----------------NIHLYNVLIHACCKSSD 215
           + L      D++ + Y++M + LGV                  N H   V      K  D
Sbjct: 183 DLLIDSDRIDVILENYEEMCKGLGVYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVD 242

Query: 216 VDKVEKLLCEMEFKDVRADLF-------------TYNTLIALYCKKGMHYEALAVQDRME 262
            +K+ K LC      V +D F             T++TLI +YCK+    EA ++ + M 
Sbjct: 243 CNKILKGLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMI 302

Query: 263 REGISPDIVTYNSLIHGFCREGRMREARRLF-----RDIK-------------------- 297
            +GI PD+V Y+ LI+G  R G++ E   LF     R +K                    
Sbjct: 303 EKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLG 362

Query: 298 ------------GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSIL 345
                       G +PN VTY+ LI+G CR   + EA  +   +  +G+ P V+TY+S++
Sbjct: 363 KAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLI 422

Query: 346 RKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLM 405
              CK   +RD   L   M  K   PD V C+ LIN   + G    A++   + ++ GL 
Sbjct: 423 DGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLT 482

Query: 406 LDQFTYKALIHGFCKAKEM--DIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALL 463
           L+ + + ALI G  + K     +   +L GM      P   +Y+ LV G   +   +  L
Sbjct: 483 LNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKV--IPDVVTYTVLVKGLAEQGRLDEAL 540

Query: 464 KLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAY 523
            L  + + +G   D  +Y  LI  FCKK       ++F LMQ NGI  D  IY  L   +
Sbjct: 541 ALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMF 600

Query: 524 WRAGEPKACSDILDDMYRRRLMITLKIYRSFSASY 558
           +R G  +   ++L ++ +  L   +  Y +    Y
Sbjct: 601 FREGCVENVLELLREIIKYGLEPDIVTYNTMICGY 635



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 102/423 (24%), Positives = 195/423 (46%), Gaps = 2/423 (0%)

Query: 122 IHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLT 181
           +   P  N    S L+  Y       +   +++ M    ++P L   ++L+N L +    
Sbjct: 267 VRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKL 326

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
           +    ++   +  GV  ++ +++ ++ A  +  D+ K  ++   M  + +  ++ TY+ L
Sbjct: 327 EEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSIL 386

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGA 299
           I   C+ G   EA  V  ++ ++G+ P ++TY+SLI GFC+   +R+   L+  +  KG 
Sbjct: 387 INGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGH 446

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
            P+ V  + LI+G  R   ++EALR       +G+      +N+++    +  R RD  +
Sbjct: 447 VPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLK 506

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
           +   M   K+ PD VT   L+    + G    A+ +  ++L+ G   D   Y  LI GFC
Sbjct: 507 MYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFC 566

Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
           K ++     ++   M   G  P  C Y+ L++ +  +   E +L+LL E +  GL  D+ 
Sbjct: 567 KKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIV 626

Query: 480 VYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
            Y  +I  +C  +    A +LF +++      +++ +T L  AY + G       I   M
Sbjct: 627 TYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSM 686

Query: 540 YRR 542
             R
Sbjct: 687 LER 689



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 107/432 (24%), Positives = 185/432 (42%), Gaps = 72/432 (16%)

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
           +VY +M++ G+  N+  Y++LI+  C++  V +   +  ++  + +   + TY++LI  +
Sbjct: 366 EVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGF 425

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNH 303
           CK     +   +   M R+G  PD+V  + LI+G  R+G M EA R F     +G T N+
Sbjct: 426 CKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNN 485

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
             +  LIDG  R     + L++  +M    V P VVTY  +++ L ++GR+ +A  L  +
Sbjct: 486 YLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQ 545

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRM------------------------ 399
           + +K  +PD++   TLI+ +CK  D A+ +++   M                        
Sbjct: 546 LLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGC 605

Query: 400 -----------LEAGLMLDQFTYKALIHGFCKAK-------------------------- 422
                      ++ GL  D  TY  +I G+C  K                          
Sbjct: 606 VENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTI 665

Query: 423 ---------EMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
                     MD A  +   ML+ G  P+  +YS L+DGY    N E+  +L ++ +   
Sbjct: 666 LIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDR 725

Query: 474 LCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACS 533
           +  ++  Y  LI   CKK  ++ A   F    G  +L D + Y  L   Y + G      
Sbjct: 726 VSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAM 785

Query: 534 DILDDMYRRRLM 545
            + D M    +M
Sbjct: 786 MLYDHMLVNGIM 797



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 66/306 (21%), Positives = 125/306 (40%), Gaps = 8/306 (2%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           G +P  V Y+ L+H +CR G +  A   F  +   G + +H   + ++D    ++ ++  
Sbjct: 136 GSNPSTV-YSFLLHCYCRNGMVDRAVDTFAWMSKMGVSISHYAASEMLDLLIDSDRIDVI 194

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
           L   E M       G+  Y  +     K G +         + E+ + P  V CN ++  
Sbjct: 195 LENYEEMCK-----GLGVYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKG 249

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
            C       A    + M+ +G   +  T+  LI+ +CK   +D A  L   M++ G  P 
Sbjct: 250 LCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPD 309

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
              YS L++G       E    L    ++RG+ +DV ++ +++  + +   +  A  ++ 
Sbjct: 310 LVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYT 369

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDN 562
            M   GI  + V Y+ L     R G       +   + ++ L  ++  Y S    + K  
Sbjct: 370 RMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSE 429

Query: 563 EILDLF 568
            + D F
Sbjct: 430 NLRDGF 435


>gi|357499119|ref|XP_003619848.1| CCP [Medicago truncatula]
 gi|355494863|gb|AES76066.1| CCP [Medicago truncatula]
          Length = 556

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 135/533 (25%), Positives = 237/533 (44%), Gaps = 27/533 (5%)

Query: 42  AIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKH--------SLQSHWTMIHILTKNKH 93
           A HK L    +C    +   + F   + AV  + H        S+    T+I  + K KH
Sbjct: 40  AFHKFLRFFSHCPKQNAKILSSFNGIDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKH 99

Query: 94  FKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVF 153
              A ++L+++  +    TPS+                 LS  +  Y +L        V 
Sbjct: 100 CPVAISLLKQMVFKGV--TPSIFT---------------LSIWINCYCHLGEMGFAFSVL 142

Query: 154 DQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKS 213
             +      P+    T ++  L  +         +  +   G++ +   Y  LI+  CK 
Sbjct: 143 GIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCKI 202

Query: 214 SDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTY 273
                  +LL EME + V+ ++  YN +I  +CK  +  +A  +  ++   GI PDI+TY
Sbjct: 203 GRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTY 262

Query: 274 NSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAA 331
            SLI GFCR G+  E ++L  ++  K   PN  T+  LID +CR   + EA  +  +M  
Sbjct: 263 TSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVK 322

Query: 332 KGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTAS 391
           +G  P +VT+N+++   C  G + +A +L + + E+ I PD  +   LI  YCK      
Sbjct: 323 RGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDE 382

Query: 392 AMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVD 451
           A+ + N M    ++LD   Y +LI G CK+  +  A EL   + + G  P+  +Y+ L+D
Sbjct: 383 AVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILID 442

Query: 452 GYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILG 511
            +C   + +  ++L      +GL   V  Y  LI  +CK +++  A  L ++MQ   +  
Sbjct: 443 AFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAP 502

Query: 512 DSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
           DS+ Y SL     ++G      ++   M+     + +  Y     ++ K  ++
Sbjct: 503 DSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVLLDAFCKAQDV 555



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 122/457 (26%), Positives = 201/457 (43%), Gaps = 8/457 (1%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQ--DGLQVFDQMRVHNLMPHLHACTVL 171
           ++ N L+ +   P     V+ +  I  + +KM      + +  QM    + P +   ++ 
Sbjct: 70  TLFNHLINMQPLPS----VIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSIW 125

Query: 172 LNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDV 231
           +N           + V   +++ G   N      ++   C + +V K       +  + +
Sbjct: 126 INCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGM 185

Query: 232 RADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARR 291
             D   Y TLI   CK G   +A  +   ME + + P+IV YN +I  FC++    +AR 
Sbjct: 186 LLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARD 245

Query: 292 LFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLC 349
           L+  I   G  P+ +TYT+LI G+CR     E  +L   M  K + P V T+N ++   C
Sbjct: 246 LYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFC 305

Query: 350 KEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQF 409
           ++G++ +A  + N M ++   PD VT NTLI+ +C  G+   A K+ + + E G++ D +
Sbjct: 306 RKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVW 365

Query: 410 TYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEF 469
           +Y  LI G+CK K +D A  L   M           YS L+DG C         +L    
Sbjct: 366 SYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTI 425

Query: 470 VSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEP 529
            + G   +V  Y  LI  FCK + +D    LF LM G G+    + Y  L   Y ++   
Sbjct: 426 NNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRI 485

Query: 530 KACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
           +   ++L  M  + L      Y S      K   I D
Sbjct: 486 REAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISD 522



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 72/207 (34%), Positives = 112/207 (54%), Gaps = 2/207 (0%)

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
           K++  + + G++ ++  Y +LI   CK   +D+   L  EM  K++  D+  Y++LI   
Sbjct: 350 KLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGL 409

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNH 303
           CK G    A  +   +  +G  P+++TYN LI  FC+   +     LF+ +  KG TP  
Sbjct: 410 CKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTV 469

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
           +TY  LI+GYC++  + EA+ L  VM +K + P  +TYNS+   LCK GRI DA  L   
Sbjct: 470 LTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKV 529

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTA 390
           M+      D  T N L++A+CK  D A
Sbjct: 530 MHVGGPPVDVATYNVLLDAFCKAQDVA 556


>gi|225427506|ref|XP_002263778.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g31840-like [Vitis vinifera]
          Length = 1131

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 116/428 (27%), Positives = 214/428 (50%), Gaps = 4/428 (0%)

Query: 153 FDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCK 212
           FD M      P+L   + L+N   K+   D  + +Y  M++ G+V ++ +Y++LI+   +
Sbjct: 263 FDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFR 322

Query: 213 SSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVT 272
           +  +++   L      + V+ D+  +++++  Y + G   +A+ V  RM +EGISP++VT
Sbjct: 323 AGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVT 382

Query: 273 YNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMA 330
           Y+ LI+G CR GR+ EA  +F  I  +G  P+ +TY++LIDG+C++ +L +   L  +M 
Sbjct: 383 YSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIML 442

Query: 331 AKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTA 390
            KG  P VV  + ++  L ++G + +A R   +  ++ +  +N   N LI+   ++  T 
Sbjct: 443 RKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTR 502

Query: 391 SAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLV 450
             +K+   M    ++ D  TY  L+ G  +   +D A  L F +L  GFSP +  Y  L+
Sbjct: 503 DGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLI 562

Query: 451 DGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGIL 510
           DG+C K +    L++     S G+  D+ +Y  LI  F ++  V+    L   +   G+ 
Sbjct: 563 DGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLE 622

Query: 511 GDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD--LF 568
            D V Y ++   Y           + + +   R       +     +Y KD  + D  L 
Sbjct: 623 PDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLI 682

Query: 569 WSHVVDRG 576
           +S +++RG
Sbjct: 683 FSSMLERG 690



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 150/575 (26%), Positives = 244/575 (42%), Gaps = 81/575 (14%)

Query: 57  PSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVL 116
           P+ +  FF+WAE+ +    H +QS   + H+L +++ F  A  + +++     +     L
Sbjct: 69  PTSALRFFEWAENFL-GLCHPVQSFCGIAHVLLRHRMFDPATRVFDRM-----VGQFGNL 122

Query: 117 NALVKIHDD----PDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLL 172
             L + H          S V S+L+  Y    M    +  F  M    +    +A + +L
Sbjct: 123 EVLGEFHGSFRNYGSNPSTVYSFLLHCYCRNGMVDRAVDTFAWMSKMGVSISHYAASEML 182

Query: 173 NSLAKDRLTDMVWKVYKKMVQ-LGVVA----------------NIHLYNVLIHACCKSSD 215
           + L      D++ + Y++M + LGV                  N H   V      K  D
Sbjct: 183 DLLIDSDRIDVILENYEEMCKGLGVYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVD 242

Query: 216 VDKVEKLLCEMEFKDVRADLF-------------TYNTLIALYCKKGMHYEALAVQDRME 262
            +K+ K LC      V +D F             T++TLI +YCK+    EA ++ + M 
Sbjct: 243 CNKILKGLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMI 302

Query: 263 REGISPDIVTYNSLIHGFCREGRMREARRLF-----RDIK-------------------- 297
            +GI PD+V Y+ LI+G  R G++ E   LF     R +K                    
Sbjct: 303 EKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLG 362

Query: 298 ------------GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSIL 345
                       G +PN VTY+ LI+G CR   + EA  +   +  +G+ P V+TY+S++
Sbjct: 363 KAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLI 422

Query: 346 RKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLM 405
              CK   +RD   L   M  K   PD V C+ LIN   + G    A++   + ++ GL 
Sbjct: 423 DGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLT 482

Query: 406 LDQFTYKALIHGFCKAKEM--DIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALL 463
           L+ + + ALI G  + K     +   +L GM      P   +Y+ LV G   +   +  L
Sbjct: 483 LNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKV--IPDVVTYTVLVKGLAEQGRLDEAL 540

Query: 464 KLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAY 523
            L  + + +G   D  +Y  LI  FCKK       ++F LMQ NGI  D  IY  L   +
Sbjct: 541 ALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMF 600

Query: 524 WRAGEPKACSDILDDMYRRRLMITLKIYRSFSASY 558
           +R G  +   ++L ++ +  L   +  Y +    Y
Sbjct: 601 FREGCVENVLELLREIIKYGLEPDIVTYNTMICGY 635



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 119/411 (28%), Positives = 186/411 (45%), Gaps = 72/411 (17%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           +DG  ++  M     +P +  C++L+N L++  + D   + + + V+ G+  N +L+N L
Sbjct: 432 RDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNAL 491

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           I  C +                K  R  L        +Y   GM+              +
Sbjct: 492 IDGCFR---------------LKRTRDGL-------KMYILMGMYK-------------V 516

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
            PD+VTY  L+ G   +GR+ EA  LF  +  KG +P+H+ Y TLIDG+C+  D    L+
Sbjct: 517 IPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQ 576

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT------ 378
           + ++M + G++P +  YN ++    +EG + +   LL E+ +  + PD VT NT      
Sbjct: 577 IFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYC 636

Query: 379 -----------------------------LINAYCKIGDTASAMKVKNRMLEAGLMLDQF 409
                                        LI+AYCK G    AM + + MLE G   +  
Sbjct: 637 SLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNIL 696

Query: 410 TYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEF 469
           TY  LI G+ K +  + A EL   ML    SP+  SYS L+DG C K   E         
Sbjct: 697 TYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCA 756

Query: 470 VSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLA 520
           + R L  DV  Y  LIR +CK  ++  A  L++ M  NGI+ D ++  +LA
Sbjct: 757 IGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPDDLLQKALA 807



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 105/441 (23%), Positives = 199/441 (45%), Gaps = 2/441 (0%)

Query: 122 IHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLT 181
           +   P  N    S L+  Y       +   +++ M    ++P L   ++L+N L +    
Sbjct: 267 VRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKL 326

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
           +    ++   +  GV  ++ +++ ++ A  +  D+ K  ++   M  + +  ++ TY+ L
Sbjct: 327 EEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSIL 386

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGA 299
           I   C+ G   EA  V  ++ ++G+ P ++TY+SLI GFC+   +R+   L+  +  KG 
Sbjct: 387 INGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGH 446

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
            P+ V  + LI+G  R   ++EALR       +G+      +N+++    +  R RD  +
Sbjct: 447 VPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLK 506

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
           +   M   K+ PD VT   L+    + G    A+ +  ++L+ G   D   Y  LI GFC
Sbjct: 507 MYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFC 566

Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
           K ++     ++   M   G  P  C Y+ L++ +  +   E +L+LL E +  GL  D+ 
Sbjct: 567 KKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIV 626

Query: 480 VYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
            Y  +I  +C  +    A +LF +++      +++ +T L  AY + G       I   M
Sbjct: 627 TYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSM 686

Query: 540 YRRRLMITLKIYRSFSASYAK 560
             R     +  Y      Y K
Sbjct: 687 LERGPEPNILTYSCLIDGYFK 707



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 107/432 (24%), Positives = 185/432 (42%), Gaps = 72/432 (16%)

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
           +VY +M++ G+  N+  Y++LI+  C++  V +   +  ++  + +   + TY++LI  +
Sbjct: 366 EVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGF 425

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNH 303
           CK     +   +   M R+G  PD+V  + LI+G  R+G M EA R F     +G T N+
Sbjct: 426 CKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNN 485

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
             +  LIDG  R     + L++  +M    V P VVTY  +++ L ++GR+ +A  L  +
Sbjct: 486 YLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQ 545

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRM------------------------ 399
           + +K  +PD++   TLI+ +CK  D A+ +++   M                        
Sbjct: 546 LLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGC 605

Query: 400 -----------LEAGLMLDQFTYKALIHGFCKAK-------------------------- 422
                      ++ GL  D  TY  +I G+C  K                          
Sbjct: 606 VENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTI 665

Query: 423 ---------EMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
                     MD A  +   ML+ G  P+  +YS L+DGY    N E+  +L ++ +   
Sbjct: 666 LIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDR 725

Query: 474 LCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACS 533
           +  ++  Y  LI   CKK  ++ A   F    G  +L D + Y  L   Y + G      
Sbjct: 726 VSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAM 785

Query: 534 DILDDMYRRRLM 545
            + D M    +M
Sbjct: 786 MLYDHMLVNGIM 797



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 66/306 (21%), Positives = 125/306 (40%), Gaps = 8/306 (2%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           G +P  V Y+ L+H +CR G +  A   F  +   G + +H   + ++D    ++ ++  
Sbjct: 136 GSNPSTV-YSFLLHCYCRNGMVDRAVDTFAWMSKMGVSISHYAASEMLDLLIDSDRIDVI 194

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
           L   E M       G+  Y  +     K G +         + E+ + P  V CN ++  
Sbjct: 195 LENYEEMCK-----GLGVYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKG 249

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
            C       A    + M+ +G   +  T+  LI+ +CK   +D A  L   M++ G  P 
Sbjct: 250 LCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPD 309

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
              YS L++G       E    L    ++RG+ +DV ++ +++  + +   +  A  ++ 
Sbjct: 310 LVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYT 369

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDN 562
            M   GI  + V Y+ L     R G       +   + ++ L  ++  Y S    + K  
Sbjct: 370 RMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSE 429

Query: 563 EILDLF 568
            + D F
Sbjct: 430 NLRDGF 435


>gi|297844018|ref|XP_002889890.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335732|gb|EFH66149.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 657

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 146/565 (25%), Positives = 258/565 (45%), Gaps = 28/565 (4%)

Query: 35  ASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWA--ESAVPNYKHSLQSHWTMIHILTKNK 92
           +SSLT+  I +VL    +    P L+  F+ W    + V   ++  ++   MIH+L   +
Sbjct: 52  SSSLTNPLISRVLRQFRSS---PKLALEFYNWVLENNTVAKSENRFEASCVMIHLLVDWR 108

Query: 93  HFKSAQNMLEKI--ALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGL 150
            F  A +++  +     + LS   VL+ L++ +     +  V   LV         Q   
Sbjct: 109 RFDDALSIMVNLMSVEGEKLSPLHVLSGLIRSYQACGSSLDVFDSLVRACTQNGDAQGAY 168

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           +V +Q R       +HA    +  L      D  W VYK+M  LG V N++ +N++I++ 
Sbjct: 169 EVIEQTRTEGFWVSVHALNNFMGCLLNLNEIDWFWMVYKEMDSLGYVENVNTFNLVIYSF 228

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRM---EREGIS 267
           CK + + +   +   M    +  ++ ++N +I   CK G    AL +  +M       +S
Sbjct: 229 CKENKLFEALSVFYRMLKCGIWPNVVSFNMMIDGACKTGDMRFALQLLGKMGVMSGNFVS 288

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRL 325
           P+ VTYNS+I+GFC+ GR+  A R+  ++   G   N  TY  L+D Y RA   +EALRL
Sbjct: 289 PNAVTYNSVINGFCKAGRLDLAERIRGEMVKLGVDCNERTYGALVDAYGRAGSSDEALRL 348

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
            + M +KG+    V YNSI+  L  EG    A  +L +M  K++  D  T   ++   C+
Sbjct: 349 CDEMTSKGLVANTVIYNSIVYWLFMEGDTEGAMMVLRDMVRKRMQIDGFTRAIVVRGLCR 408

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            G  A A++   ++ E  L+ D   +  L+H F + K++    ++L  ML  G       
Sbjct: 409 NGYVAEAVEFHRQISEKKLVEDIVCHNTLMHHFVRDKKLVCVDQILGSMLVHGLGLDTIL 468

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           +  L+DGY  +   E  + + D  +      ++ +Y +++    K+     A+ + N M+
Sbjct: 469 FGTLIDGYLKEGKLERAIDIYDGMIKMNKTPNLVIYNSIVNGLSKRGMAGAAEAVVNAME 528

Query: 506 GNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRR--RLMITLKIYRSF------SAS 557
                 D+V Y +L     + G  +   +IL  M ++     ++L  Y            
Sbjct: 529 SK----DTVTYNTLLNGSLKIGNVEEADNILSRMQKQDGEKSVSLVTYNILINHLCKFGC 584

Query: 558 YAKDNEILDLFWSHVVDRGLMSKHI 582
           Y K  E+L +    +V+RG++   I
Sbjct: 585 YEKAKEVLKI----MVERGVVPDSI 605



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 87/326 (26%), Positives = 159/326 (48%), Gaps = 8/326 (2%)

Query: 171 LLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKD 230
           L+++  +   +D   ++  +M   G+VAN  +YN +++      D +    +L +M  K 
Sbjct: 332 LVDAYGRAGSSDEALRLCDEMTSKGLVANTVIYNSIVYWLFMEGDTEGAMMVLRDMVRKR 391

Query: 231 VRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREAR 290
           ++ D FT   ++   C+ G   EA+    ++  + +  DIV +N+L+H F R+ ++    
Sbjct: 392 MQIDGFTRAIVVRGLCRNGYVAEAVEFHRQISEKKLVEDIVCHNTLMHHFVRDKKLVCVD 451

Query: 291 RLFRD--IKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
           ++     + G   + + + TLIDGY +   LE A+ + + M      P +V YNSI+  L
Sbjct: 452 QILGSMLVHGLGLDTILFGTLIDGYLKEGKLERAIDIYDGMIKMNKTPNLVIYNSIVNGL 511

Query: 349 CKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML--EAGLML 406
            K G    A  ++N M  K    D VT NTL+N   KIG+   A  + +RM   +    +
Sbjct: 512 SKRGMAGAAEAVVNAMESK----DTVTYNTLLNGSLKIGNVEEADNILSRMQKQDGEKSV 567

Query: 407 DQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLL 466
              TY  LI+  CK    + AKE+L  M++ G  P   +Y  L+  +     +E +++L 
Sbjct: 568 SLVTYNILINHLCKFGCYEKAKEVLKIMVERGVVPDSITYGTLITSFSKNRGQEEVVELH 627

Query: 467 DEFVSRGLCVDVSVYRALIRRFCKKE 492
           D  + +G+     +Y++++R     E
Sbjct: 628 DYMILQGVTPHEHIYQSIVRPLLDGE 653



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 128/250 (51%), Gaps = 8/250 (3%)

Query: 170 VLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFK 229
           +++  L ++       + ++++ +  +V +I  +N L+H   +   +  V+++L  M   
Sbjct: 401 IVVRGLCRNGYVAEAVEFHRQISEKKLVEDIVCHNTLMHHFVRDKKLVCVDQILGSMLVH 460

Query: 230 DVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA 289
            +  D   + TLI  Y K+G    A+ + D M +   +P++V YNS+++G  + G    A
Sbjct: 461 GLGLDTILFGTLIDGYLKEGKLERAIDIYDGMIKMNKTPNLVIYNSIVNGLSKRGMAGAA 520

Query: 290 RRLFRDIKGATPNHVTYTTLIDGYCRANDLEEA----LRLREVMAAKGVYPGVVTYNSIL 345
             +   ++  + + VTY TL++G  +  ++EEA     R+++    K V   +VTYN ++
Sbjct: 521 EAVVNAME--SKDTVTYNTLLNGSLKIGNVEEADNILSRMQKQDGEKSV--SLVTYNILI 576

Query: 346 RKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLM 405
             LCK G    A  +L  M E+ + PD++T  TLI ++ K       +++ + M+  G+ 
Sbjct: 577 NHLCKFGCYEKAKEVLKIMVERGVVPDSITYGTLITSFSKNRGQEEVVELHDYMILQGVT 636

Query: 406 LDQFTYKALI 415
             +  Y++++
Sbjct: 637 PHEHIYQSIV 646



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 96/202 (47%), Gaps = 8/202 (3%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           Q+   M VH L         L++   K+   +    +Y  M+++    N+ +YN +++  
Sbjct: 452 QILGSMLVHGLGLDTILFGTLIDGYLKEGKLERAIDIYDGMIKMNKTPNLVIYNSIVNGL 511

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG--ISP 268
            K       E ++  ME KD      TYNTL+    K G   EA  +  RM+++    S 
Sbjct: 512 SKRGMAGAAEAVVNAMESKDT----VTYNTLLNGSLKIGNVEEADNILSRMQKQDGEKSV 567

Query: 269 DIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLR 326
            +VTYN LI+  C+ G   +A+ + + +  +G  P+ +TY TLI  + +    EE + L 
Sbjct: 568 SLVTYNILINHLCKFGCYEKAKEVLKIMVERGVVPDSITYGTLITSFSKNRGQEEVVELH 627

Query: 327 EVMAAKGVYPGVVTYNSILRKL 348
           + M  +GV P    Y SI+R L
Sbjct: 628 DYMILQGVTPHEHIYQSIVRPL 649


>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
          Length = 568

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 107/328 (32%), Positives = 174/328 (53%), Gaps = 3/328 (0%)

Query: 195 GVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFK-DVRADLFTYNTLIALYCKKGMHYE 253
           G+  N + Y  +I   CK   VD+  K+  EM  K +V+ +   YN LI  YC +G    
Sbjct: 216 GIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDT 275

Query: 254 ALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLID 311
           AL  +DRM   G++  + TYN L+H    +GR  EA  L  ++  KG   +  TY  LI+
Sbjct: 276 ALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILIN 335

Query: 312 GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAP 371
           G+C+  ++++AL + E M+ +GV   VVTY S++  L K+G++++ ++L +E   + I P
Sbjct: 336 GHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRP 395

Query: 372 DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
           D V  N LIN++   G+   A ++   M +  +  D  TY  L+ G C    +D A++L+
Sbjct: 396 DLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLI 455

Query: 432 FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
             M   G  P   +Y+ L+ GY  K + +  L++ +E +++G    +  Y ALI+  CK 
Sbjct: 456 DEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKN 515

Query: 492 EKVDYAQRLFNLMQGNGILGDSVIYTSL 519
            + D A+ +   M  NGI  D   Y SL
Sbjct: 516 GQGDDAENMVKEMVENGITPDDSTYISL 543



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 101/332 (30%), Positives = 175/332 (52%), Gaps = 3/332 (0%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHN-LMPHLHACTVLLNSLAKDRLTDMVWKV 187
           N +    ++  +  +    + ++VFD+M     + P       L+         D     
Sbjct: 220 NQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLY 279

Query: 188 YKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCK 247
             +MV+ GV   +  YN+L+HA        +  +L+ EM  K +  D+FTYN LI  +CK
Sbjct: 280 RDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCK 339

Query: 248 KGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVT 305
           +G   +AL + + M R G+   +VTY SLI+   ++G+++E  +LF +   +G  P+ V 
Sbjct: 340 EGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVL 399

Query: 306 YTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMN 365
           Y  LI+ +  + +++ A  +   M  K + P  VTYN+++R LC  GR+ +A +L++EM 
Sbjct: 400 YNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMT 459

Query: 366 EKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMD 425
           ++ I PD VT NTLI+ Y   GD   A++++N M+  G      TY ALI G CK  + D
Sbjct: 460 KRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGD 519

Query: 426 IAKELLFGMLDAGFSPSYCSYSWLVDGYCNKN 457
            A+ ++  M++ G +P   +Y  L++G   ++
Sbjct: 520 DAENMVKEMVENGITPDDSTYISLIEGLTTED 551



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 122/438 (27%), Positives = 210/438 (47%), Gaps = 12/438 (2%)

Query: 130 SHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYK 189
           S + + L+   A ++     L+++ +M+  +L     +   LL++L     +   + ++ 
Sbjct: 88  SSLPNLLLTASAAVRPHATSLRLYSRMKSLSLPISTASLHPLLSALP----SAPAFALFA 143

Query: 190 KMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKG 249
            M +L +      +N+++   C +    +  +LL +M     R +  TYNT+IA +C +G
Sbjct: 144 DMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIAGFCSRG 199

Query: 250 MHYEALAVQDRM-EREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGAT-PNHVT 305
               AL +   M ER GI+P+  TY ++I G+C+ GR+ EA ++F ++  KG   P  V 
Sbjct: 200 RVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVM 259

Query: 306 YTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMN 365
           Y  LI GYC    L+ AL  R+ M  +GV   V TYN ++  L  +GR  +A  L+ EM 
Sbjct: 260 YNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMG 319

Query: 366 EKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMD 425
            K +A D  T N LIN +CK G+   A+++   M   G+     TY +LI+   K  ++ 
Sbjct: 320 GKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQ 379

Query: 426 IAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
              +L    +  G  P    Y+ L++ +    N +   +++ E   + +  D   Y  L+
Sbjct: 380 ETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLM 439

Query: 486 RRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
           R  C   +VD A++L + M   GI  D V Y +L   Y   G+ K    I ++M  +   
Sbjct: 440 RGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFN 499

Query: 546 ITLKIYRSFSASYAKDNE 563
            TL  Y +      K+ +
Sbjct: 500 PTLLTYNALIQGLCKNGQ 517



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 118/421 (28%), Positives = 195/421 (46%), Gaps = 29/421 (6%)

Query: 161 LMPHLHACT-----VLLNSLAKDRLTDMVWKVYKKMVQLGV---VANIH-LYNVLIHACC 211
           ++PHL         +LL + A  R      ++Y +M  L +    A++H L + L  A  
Sbjct: 79  VLPHLDGAPSSLPNLLLTASAAVRPHATSLRLYSRMKSLSLPISTASLHPLLSALPSAPA 138

Query: 212 KS--SDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
            +  +D+ ++   LC            T+N ++   C  G    AL +  +M R    P+
Sbjct: 139 FALFADMFRLRLPLCTT----------TFNIMLRHLCSAGKPARALELLRQMPR----PN 184

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDIK---GATPNHVTYTTLIDGYCRANDLEEALRLR 326
            VTYN++I GFC  GR++ A  + R+++   G  PN  TY T+I G+C+   ++EA+++ 
Sbjct: 185 AVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVF 244

Query: 327 EVMAAKG-VYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
           + M  KG V P  V YN+++   C +G++  A    + M E+ +A    T N L++A   
Sbjct: 245 DEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFM 304

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            G    A ++   M   GL LD FTY  LI+G CK   +  A E+   M   G   +  +
Sbjct: 305 DGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVT 364

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+ L+     K   +   KL DE V RG+  D+ +Y ALI        +D A  +   M+
Sbjct: 365 YTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEME 424

Query: 506 GNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEIL 565
              I  D V Y +L       G       ++D+M +R +   L  Y +  + Y+   ++ 
Sbjct: 425 KKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVK 484

Query: 566 D 566
           D
Sbjct: 485 D 485



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 87/264 (32%), Positives = 136/264 (51%), Gaps = 2/264 (0%)

Query: 170 VLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFK 229
           +L+++L  D      +++ ++M   G+  ++  YN+LI+  CK  +V K  ++   M  +
Sbjct: 297 LLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRR 356

Query: 230 DVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA 289
            VRA + TY +LI    KKG   E   + D   R GI PD+V YN+LI+     G +  A
Sbjct: 357 GVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRA 416

Query: 290 RRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRK 347
             +  ++  K   P+ VTY TL+ G C    ++EA +L + M  +G+ P +VTYN+++  
Sbjct: 417 FEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISG 476

Query: 348 LCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLD 407
              +G ++DA R+ NEM  K   P  +T N LI   CK G    A  +   M+E G+  D
Sbjct: 477 YSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPD 536

Query: 408 QFTYKALIHGFCKAKEMDIAKELL 431
             TY +LI G     E  I  E L
Sbjct: 537 DSTYISLIEGLTTEDERAIDDERL 560



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/209 (23%), Positives = 82/209 (39%), Gaps = 17/209 (8%)

Query: 75  KHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLS 134
           + ++ ++ ++I+ L+K    +    + ++   R       + NAL+        NSH  S
Sbjct: 359 RATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALI--------NSHSTS 410

Query: 135 WLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQL 194
             +             ++  +M    + P       L+  L      D   K+  +M + 
Sbjct: 411 GNI---------DRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKR 461

Query: 195 GVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEA 254
           G+  ++  YN LI       DV    ++  EM  K     L TYN LI   CK G   +A
Sbjct: 462 GIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDA 521

Query: 255 LAVQDRMEREGISPDIVTYNSLIHGFCRE 283
             +   M   GI+PD  TY SLI G   E
Sbjct: 522 ENMVKEMVENGITPDDSTYISLIEGLTTE 550


>gi|225443946|ref|XP_002272135.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Vitis vinifera]
          Length = 733

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 123/509 (24%), Positives = 235/509 (46%), Gaps = 21/509 (4%)

Query: 63  FFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKI 122
           FF WA+     Y+H    ++ M+ IL+K K  + A+ +L  +A R     P         
Sbjct: 120 FFYWADRQW-RYRHDPIVYYAMLEILSKTKLCQGAKRVLRLMAKRRIERRP--------- 169

Query: 123 HDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTD 182
                       ++++ Y+     ++ ++V   M+   + P L  C   ++ L      D
Sbjct: 170 --------EAFGYVMVSYSRAGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLD 221

Query: 183 MVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLI 242
              +  ++M  + +  N+  YN LI   C    ++   +L+ EM FK    D  +Y T++
Sbjct: 222 KAVRFLERMQIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVM 281

Query: 243 ALYCKKGMHYEALAVQDRMEREG-ISPDIVTYNSLIHGFCREGRMREARRLFRDIKGAT- 300
              CK+    E   + ++M ++  + PD VTYN+ +H   + G   EA    R+ +    
Sbjct: 282 GFLCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRF 341

Query: 301 -PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
             + V Y+ ++  +CR   +++A  +   M +KG  P VVTY S++  LC+E ++  A +
Sbjct: 342 RVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKK 401

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
           +L +M +    P+ V+   L+N  CK G++  A ++ N   E   + +  TY  L+HGF 
Sbjct: 402 MLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFR 461

Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
           +  +   A +L+  M+  GF P+    + L+   C +   +   + +++ ++ G  V+V 
Sbjct: 462 REGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVV 521

Query: 480 VYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
            +  +I  FC+K+ ++ A  L + M  +    D V YT++  A  + G  +  + +   M
Sbjct: 522 NFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKM 581

Query: 540 YRRRLMITLKIYRSFSASYAKDNEILDLF 568
            R  L+ T   YR+    Y +   + DL 
Sbjct: 582 LRVGLIPTPVTYRTVIHQYCRMGRVEDLL 610


>gi|302794977|ref|XP_002979252.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
 gi|300153020|gb|EFJ19660.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
          Length = 702

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 133/505 (26%), Positives = 229/505 (45%), Gaps = 97/505 (19%)

Query: 112 TPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVL 171
           TP V   +++  +DPD     ++W    +A     + G Q       HN     + C VL
Sbjct: 42  TPEVAGRVLQQVEDPD-----VAWTFFQWAG---NKPGFQ-------HNA----YTCAVL 82

Query: 172 LNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDV 231
           LN+  K +  +   ++ K+ ++     N  +Y  +I+  CK+  VD+  +LL EM+ + V
Sbjct: 83  LNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVDQAFELLDEMKERGV 142

Query: 232 RADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARR 291
           + D+  ++TLI   C+KG   EAL     M  E  SP+++TYN++++G C+  R+ EA  
Sbjct: 143 KMDVLLHSTLIQGLCRKGRIDEALEQFKSMGEE-CSPNVITYNTVVNGLCKANRIDEALE 201

Query: 292 LFRDIK------------------------------------------GATPNHVTYTTL 309
           LF D++                                          G  PN VTY++L
Sbjct: 202 LFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSL 261

Query: 310 IDGYCRAN-----------------------------------DLEEALRLREVMAAKGV 334
           IDG C+ +                                   + E+A +  E +   G 
Sbjct: 262 IDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGK 321

Query: 335 YPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMK 394
            P VVTYN  +  LCK GR+ +A R+L EM E K+ PD +T +++I+ +CK G    A  
Sbjct: 322 KPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADD 381

Query: 395 VKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYC 454
           V  RM+    +    T+  L+HGF + K+   A  +   M++AGF P   +Y+ L+D  C
Sbjct: 382 VFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVC 441

Query: 455 NKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSV 514
             ++ E+ L++  +   +    D + Y  LI+  C+  +VD A+   ++M+ + ++ +  
Sbjct: 442 GADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGA 501

Query: 515 IYTSLAYAYWRAGEPKACSDILDDM 539
           I  +L     + GE      +LD++
Sbjct: 502 ICHALVEVLCKQGEVDEACSVLDNV 526



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 100/377 (26%), Positives = 187/377 (49%), Gaps = 7/377 (1%)

Query: 182 DMVWKVYK-KMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNT 240
           D+ W  ++    + G   N +   VL++A  K+   ++  +LL E        +   Y T
Sbjct: 57  DVAWTFFQWAGNKPGFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTT 116

Query: 241 LIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI-KGA 299
           +I  +CK G   +A  + D M+  G+  D++ +++LI G CR+GR+ EA   F+ + +  
Sbjct: 117 VINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGEEC 176

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVM-----AAKGVYPGVVTYNSILRKLCKEGRI 354
           +PN +TY T+++G C+AN ++EAL L + M     A+ G  P V++Y++++  LCK  R+
Sbjct: 177 SPNVITYNTVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRV 236

Query: 355 RDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKAL 414
             A      M     AP+ VT ++LI+  CK+   +  +++   M E G  ++   + A+
Sbjct: 237 DKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAM 296

Query: 415 IHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGL 474
           +H   K  E + A +    +L +G  P+  +Y+  V G C     +   ++L E V   +
Sbjct: 297 LHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKV 356

Query: 475 CVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSD 534
             DV  Y ++I  FCK  ++D A  +F  M  +  +   V + +L + +    + +    
Sbjct: 357 TPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFR 416

Query: 535 ILDDMYRRRLMITLKIY 551
           + +DM     +  L+ Y
Sbjct: 417 VHEDMVNAGFIPGLQTY 433



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 107/414 (25%), Positives = 181/414 (43%), Gaps = 42/414 (10%)

Query: 171 LLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKD 230
           +L++L K+   +   + ++++++ G   N+  YNV +H  CK+  VD+  ++L EM    
Sbjct: 296 MLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESK 355

Query: 231 VRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREAR 290
           V  D+ TY+++I  +CK G   +A  V  RM      P  VT+ +L+HGF    + REA 
Sbjct: 356 VTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAF 415

Query: 291 RLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
           R+  D+   G  P   TY  L+D  C A+ +E AL +   M  K   P   TY  +++ L
Sbjct: 416 RVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCL 475

Query: 349 CKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLE------- 401
           C+  R+ +A   L+ M    + P+   C+ L+   CK G+   A  V + ++E       
Sbjct: 476 CRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLG 535

Query: 402 -------------------------AGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD 436
                                     G + D  TY   +   CKA + D A E++  M+ 
Sbjct: 536 ETFKILVEELYLRKKWEAASKLLRSPGFVADAATYSLCVAEICKAGKPDEAVEVIEQMVL 595

Query: 437 AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDY 496
            G  P   +Y  ++   C  +  E+ +   ++  SRG    +  Y  LI   C  +  D 
Sbjct: 596 KGVRPDEGTYVAVLRSLCGLDRVESAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADE 655

Query: 497 AQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKI 550
           A R+F  M   G    +    +L+     AG          D+  R+ ++T+ I
Sbjct: 656 AFRIFEAMVAAGFTPQAQTMRTLSSCLRDAG--------YQDLLVRQRIMTMAI 701



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 99/399 (24%), Positives = 189/399 (47%), Gaps = 10/399 (2%)

Query: 148 DGLQVFDQMR-----VHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHL 202
           + L++FD M       H   P + + + ++++L K +  D  ++ +K+M  +G   N+  
Sbjct: 198 EALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVT 257

Query: 203 YNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRME 262
           Y+ LI   CK     +  +LL  M+ K    ++  +N ++    K     +A    +R+ 
Sbjct: 258 YSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLL 317

Query: 263 REGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLE 320
           + G  P++VTYN  +HG C+ GR+ EA R+  ++     TP+ +TY+++IDG+C+A  ++
Sbjct: 318 KSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMD 377

Query: 321 EALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLI 380
           +A  +   M      P  VT+ ++L    +  + R+A R+  +M      P   T N L+
Sbjct: 378 KADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLM 437

Query: 381 NAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFS 440
           +  C      SA+++ ++M       D  TY  LI   C+A+ +D AKE L  M      
Sbjct: 438 DCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVV 497

Query: 441 PSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRL 500
           P+      LV+  C +   +    +LD  V  G       ++ L+     ++K + A + 
Sbjct: 498 PNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEELYLRKKWEAASK- 556

Query: 501 FNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
             L++  G + D+  Y+       +AG+P    ++++ M
Sbjct: 557 --LLRSPGFVADAATYSLCVAEICKAGKPDEAVEVIEQM 593



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 81/305 (26%), Positives = 149/305 (48%), Gaps = 8/305 (2%)

Query: 263 REGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGAT--PNHVTYTTLIDGYCRANDLE 320
           + G   +  T   L++ F +  R  EA RL ++       PN + YTT+I+G+C+A  ++
Sbjct: 69  KPGFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVD 128

Query: 321 EALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLI 380
           +A  L + M  +GV   V+ ++++++ LC++GRI +A      M E+  +P+ +T NT++
Sbjct: 129 QAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGEE-CSPNVITYNTVV 187

Query: 381 NAYCKIGDTASAMKVKNRM---LEA--GLMLDQFTYKALIHGFCKAKEMDIAKELLFGML 435
           N  CK      A+++ + M    EA  G   D  +Y  +I   CKA+ +D A E    M 
Sbjct: 188 NGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMR 247

Query: 436 DAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVD 495
             G +P+  +YS L+DG C  +     L+LL     +G  +++  + A++    K ++ +
Sbjct: 248 AVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQE 307

Query: 496 YAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFS 555
            A + F  +  +G   + V Y    +   +AG       IL +M   ++   +  Y S  
Sbjct: 308 KACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSII 367

Query: 556 ASYAK 560
             + K
Sbjct: 368 DGFCK 372



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/293 (25%), Positives = 134/293 (45%), Gaps = 5/293 (1%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           VF +M VH  +PH      LL+  ++ + +   ++V++ MV  G +  +  YNVL+   C
Sbjct: 382 VFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVC 441

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
            +  V+   ++  +M+ K  + D  TY  LI   C+     EA    D ME + + P+  
Sbjct: 442 GADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGA 501

Query: 272 TYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
             ++L+   C++G + EA  +  ++   G  P   T+  L++        E A +L   +
Sbjct: 502 ICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEELYLRKKWEAASKL---L 558

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
            + G      TY+  + ++CK G+  +A  ++ +M  K + PD  T   ++ + C +   
Sbjct: 559 RSPGFVADAATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVLRSLCGLDRV 618

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
            SA+    +M   G      TY  LI   C A   D A  +   M+ AGF+P 
Sbjct: 619 ESAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADEAFRIFEAMVAAGFTPQ 671



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 105/229 (45%), Gaps = 6/229 (2%)

Query: 340 TYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRM 399
           T   +L    K  R  +A+RLL E  E    P+ +   T+IN +CK G    A ++ + M
Sbjct: 78  TCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVDQAFELLDEM 137

Query: 400 LEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNE 459
            E G+ +D   +  LI G C+   +D A E  F  +    SP+  +Y+ +V+G C  N  
Sbjct: 138 KERGVKMDVLLHSTLIQGLCRKGRIDEALEQ-FKSMGEECSPNVITYNTVVNGLCKANRI 196

Query: 460 EALLKLLDEF-----VSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSV 514
           +  L+L D+       S G   DV  Y  +I   CK ++VD A   F  M+  G   + V
Sbjct: 197 DEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVV 256

Query: 515 IYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNE 563
            Y+SL     +   P  C ++L  M  +   I +  + +   +  K++E
Sbjct: 257 TYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDE 305


>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63070, mitochondrial; Flags: Precursor
 gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
 gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 590

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 117/353 (33%), Positives = 179/353 (50%), Gaps = 3/353 (0%)

Query: 177 KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLF 236
           +D   D    ++  MV+     +I  ++ L+ A  K +  D V  L  +M+   +  +L+
Sbjct: 52  QDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLY 111

Query: 237 TYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI 296
           TY+  I  +C++     ALA+  +M + G  P IVT NSL++GFC   R+ EA  L   +
Sbjct: 112 TYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 171

Query: 297 --KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRI 354
              G  P+ VT+TTL+ G  + N   EA+ L E M  KG  P +VTY +++  LCK G  
Sbjct: 172 VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP 231

Query: 355 RDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKAL 414
             A  LLN+M + KI  D V  NT+I+  CK      A  + N+M   G+  D FTY  L
Sbjct: 232 DLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPL 291

Query: 415 IHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGL 474
           I   C       A  LL  ML+   +P    ++ L+D +  +       KL DE V    
Sbjct: 292 ISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKH 351

Query: 475 CV-DVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRA 526
           C  DV  Y  LI+ FCK ++V+    +F  M   G++G++V YT+L + +++A
Sbjct: 352 CFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQA 404



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 119/403 (29%), Positives = 193/403 (47%), Gaps = 5/403 (1%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLA-KDRLTDMVWKV 187
           N +  S  + ++         L +  +M      P +     LLN     +R+++ V  V
Sbjct: 109 NLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALV 168

Query: 188 YKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCK 247
             +MV++G   +   +  L+H   + +   +   L+  M  K  + DL TY  +I   CK
Sbjct: 169 -DQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCK 227

Query: 248 KGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR--DIKGATPNHVT 305
           +G    AL + ++ME+  I  D+V YN++I G C+   M +A  LF   + KG  P+  T
Sbjct: 228 RGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFT 287

Query: 306 YTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM- 364
           Y  LI   C      +A RL   M  K + P +V +N+++    KEG++ +A +L +EM 
Sbjct: 288 YNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMV 347

Query: 365 NEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEM 424
             K   PD V  NTLI  +CK       M+V   M + GL+ +  TY  LIHGF +A++ 
Sbjct: 348 KSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDC 407

Query: 425 DIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRAL 484
           D A+ +   M+  G  P   +Y+ L+DG CN  N E  L + +    R + +D+  Y  +
Sbjct: 408 DNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTM 467

Query: 485 IRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
           I   CK  KV+    LF  +   G+  + V YT++   + R G
Sbjct: 468 IEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKG 510



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 110/396 (27%), Positives = 190/396 (47%), Gaps = 3/396 (0%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
            + + + DQM      P     T L++ L +         + ++MV  G   ++  Y  +
Sbjct: 162 SEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAV 221

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           I+  CK  + D    LL +ME   + AD+  YNT+I   CK     +A  + ++ME +GI
Sbjct: 222 INGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGI 281

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
            PD+ TYN LI   C  GR  +A RL  D+  K   P+ V +  LID + +   L EA +
Sbjct: 282 KPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEK 341

Query: 325 L-REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
           L  E++ +K  +P VV YN++++  CK  R+ +   +  EM+++ +  + VT  TLI+ +
Sbjct: 342 LYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGF 401

Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY 443
            +  D  +A  V  +M+  G+  D  TY  L+ G C    ++ A  +   M         
Sbjct: 402 FQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDI 461

Query: 444 CSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNL 503
            +Y+ +++  C     E    L      +G+  +V  Y  ++  FC+K   + A  LF  
Sbjct: 462 VTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVE 521

Query: 504 MQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
           M+ +G L +S  Y +L  A  R G+  A ++++ +M
Sbjct: 522 MKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEM 557



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 106/406 (26%), Positives = 194/406 (47%), Gaps = 5/406 (1%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           ++++ +V++   PD  +       +F  N     + + + ++M V    P L     ++N
Sbjct: 166 ALVDQMVEMGYQPDTVTFTTLVHGLFQHN--KASEAVALVERMVVKGCQPDLVTYGAVIN 223

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
            L K    D+   +  KM +  + A++ +YN +I   CK   +D    L  +ME K ++ 
Sbjct: 224 GLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKP 283

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           D+FTYN LI+  C  G   +A  +   M  + I+PD+V +N+LI  F +EG++ EA +L+
Sbjct: 284 DVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLY 343

Query: 294 RDI---KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
            ++   K   P+ V Y TLI G+C+   +EE + +   M+ +G+    VTY +++    +
Sbjct: 344 DEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQ 403

Query: 351 EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
                +A  +  +M    + PD +T N L++  C  G+  +A+ V   M +  + LD  T
Sbjct: 404 ARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVT 463

Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFV 470
           Y  +I   CKA +++   +L   +   G  P+  +Y+ ++ G+C K  +E    L  E  
Sbjct: 464 YTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMK 523

Query: 471 SRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIY 516
             G   +   Y  LIR   +      +  L   M+  G  GD+  +
Sbjct: 524 EDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTF 569



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 118/442 (26%), Positives = 204/442 (46%), Gaps = 30/442 (6%)

Query: 47  LLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIAL 106
           LLN +  CH   +S A     +     Y+    +  T++H L ++     A  ++E++ +
Sbjct: 151 LLNGF--CHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVV 208

Query: 107 R----DFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLM 162
           +    D ++  +V+N L K   +PD                      L + ++M    + 
Sbjct: 209 KGCQPDLVTYGAVINGLCK-RGEPD--------------------LALNLLNKMEKGKIE 247

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
             +     +++ L K +  D  + ++ KM   G+  ++  YN LI   C         +L
Sbjct: 248 ADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRL 307

Query: 223 LCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRM-EREGISPDIVTYNSLIHGFC 281
           L +M  K++  DL  +N LI  + K+G   EA  + D M + +   PD+V YN+LI GFC
Sbjct: 308 LSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFC 367

Query: 282 REGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVV 339
           +  R+ E   +FR++  +G   N VTYTTLI G+ +A D + A  + + M + GV+P ++
Sbjct: 368 KYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIM 427

Query: 340 TYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRM 399
           TYN +L  LC  G +  A  +   M ++ +  D VT  T+I A CK G       +   +
Sbjct: 428 TYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSL 487

Query: 400 LEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNE 459
              G+  +  TY  ++ GFC+    + A  L   M + G  P+  +Y+ L+       +E
Sbjct: 488 SLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDE 547

Query: 460 EALLKLLDEFVSRGLCVDVSVY 481
            A  +L+ E  S G   D S +
Sbjct: 548 AASAELIKEMRSCGFAGDASTF 569



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 80/293 (27%), Positives = 134/293 (45%), Gaps = 2/293 (0%)

Query: 253 EALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLI 310
           +A+ +   M +    P IV ++ L+    +  +      L   ++  G + N  TY+  I
Sbjct: 58  DAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFI 117

Query: 311 DGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIA 370
           + +CR + L  AL +   M   G  P +VT NS+L   C   RI +A  L+++M E    
Sbjct: 118 NYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQ 177

Query: 371 PDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL 430
           PD VT  TL++   +    + A+ +  RM+  G   D  TY A+I+G CK  E D+A  L
Sbjct: 178 PDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNL 237

Query: 431 LFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCK 490
           L  M           Y+ ++DG C   + +    L ++  ++G+  DV  Y  LI   C 
Sbjct: 238 LNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCN 297

Query: 491 KEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRR 543
             +   A RL + M    I  D V + +L  A+ + G+      + D+M + +
Sbjct: 298 YGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSK 350



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 75/309 (24%), Positives = 143/309 (46%), Gaps = 4/309 (1%)

Query: 285 RMREARRLFRDIKGATP--NHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYN 342
           ++ +A  LF D+  + P  + V ++ L+    + N  +  + L E M   G+   + TY+
Sbjct: 55  KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114

Query: 343 SILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEA 402
             +   C+  ++  A  +L +M +    P  VT N+L+N +C     + A+ + ++M+E 
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174

Query: 403 GLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEAL 462
           G   D  T+  L+HG  +  +   A  L+  M+  G  P   +Y  +++G C +   +  
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234

Query: 463 LKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYA 522
           L LL++     +  DV +Y  +I   CK + +D A  LFN M+  GI  D   Y  L   
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISC 294

Query: 523 YWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHI 582
               G     S +L DM  + +   L  + +   ++ K+ ++++     + D  + SKH 
Sbjct: 295 LCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVE--AEKLYDEMVKSKHC 352

Query: 583 FKEMQLRNS 591
           F ++   N+
Sbjct: 353 FPDVVAYNT 361



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 52/223 (23%), Positives = 102/223 (45%)

Query: 346 RKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLM 405
           RK+ ++ ++ DA  L  +M + +  P  V  + L++A  K+      + +  +M   G+ 
Sbjct: 48  RKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGIS 107

Query: 406 LDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKL 465
            + +TY   I+ FC+  ++ +A  +L  M+  G+ PS  + + L++G+C+ N     + L
Sbjct: 108 HNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVAL 167

Query: 466 LDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWR 525
           +D+ V  G   D   +  L+    +  K   A  L   M   G   D V Y ++     +
Sbjct: 168 VDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCK 227

Query: 526 AGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLF 568
            GEP    ++L+ M + ++   + IY +      K   + D F
Sbjct: 228 RGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAF 270


>gi|357167837|ref|XP_003581356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Brachypodium distachyon]
          Length = 524

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 117/379 (30%), Positives = 181/379 (47%), Gaps = 6/379 (1%)

Query: 162 MPHLHACT---VLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDK 218
           MP  +A T   V+    A+ R+   +  + +   + G+  + + Y  +I   CK   V+ 
Sbjct: 142 MPSPNAVTYNTVIAGFCARGRVQAGIEIMREMRERGGIAPDKYTYATVISGWCKVGKVED 201

Query: 219 VEKLLCEMEFKD-VRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLI 277
             K+  EM  +  V  +   YN LI  YC +G    AL  +  M   G+S  + TYN  +
Sbjct: 202 ATKVFDEMLTEGKVEPNAVMYNALIGGYCDQGNLEVALRYRGEMVDRGVSMTVATYNLFV 261

Query: 278 HGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVY 335
           H    EGR  EA  L  ++  KG  P+  TY  LI+GYC+    ++A+++ EVM  KG+ 
Sbjct: 262 HTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIR 321

Query: 336 PGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKV 395
             VVTY S++  L  +G +++ +RL N+   + I PD    N LIN++C  GD   A ++
Sbjct: 322 ATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEI 381

Query: 396 KNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCN 455
              M +  +  D  TY  L+ G C    +D A+ L+  M   G  P   SY+ L+ GY  
Sbjct: 382 MGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTLISGYSM 441

Query: 456 KNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVI 515
           K + +  +K+ DE + +G    +  Y A+I+  C   +   A+ L   M GNGI  D   
Sbjct: 442 KGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVGNGITPDDST 501

Query: 516 YTSLAYAYWRAGEPKACSD 534
           Y SL        E  A  D
Sbjct: 502 YISLIEGLTTEDERLAAGD 520



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 112/356 (31%), Positives = 172/356 (48%), Gaps = 8/356 (2%)

Query: 203 YNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRM- 261
           +N+++   C +    +  +LL +M   +      TYNT+IA +C +G     + +   M 
Sbjct: 119 FNIMLRHLCTAGKPVRALELLRQMPSPNA----VTYNTVIAGFCARGRVQAGIEIMREMR 174

Query: 262 EREGISPDIVTYNSLIHGFCREGRMREARRLFRDI---KGATPNHVTYTTLIDGYCRAND 318
           ER GI+PD  TY ++I G+C+ G++ +A ++F ++       PN V Y  LI GYC   +
Sbjct: 175 ERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNALIGGYCDQGN 234

Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT 378
           LE ALR R  M  +GV   V TYN  +  L  EGR  +A+ L+ EM EK +APD  T N 
Sbjct: 235 LEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNI 294

Query: 379 LINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAG 438
           LIN YCK G    AMK+   M+  G+     TY +LIH       +     L    +  G
Sbjct: 295 LINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRG 354

Query: 439 FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQ 498
             P    Y+ L++ +C   + +   +++ E   + +  D   Y  L+R  C   ++D A+
Sbjct: 355 IRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEAR 414

Query: 499 RLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSF 554
            L   M   GI  D V Y +L   Y   G+ K    + D+M  +    TL  Y + 
Sbjct: 415 GLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAM 470



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 80/233 (34%), Positives = 127/233 (54%), Gaps = 2/233 (0%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           + ++M    L P      +L+N   K+       K+++ MV  G+ A +  Y  LIHA  
Sbjct: 276 LVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALS 335

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
               V + ++L  +   + +R DLF YN LI  +C  G    A  +   ME++ I+PD V
Sbjct: 336 MKGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDV 395

Query: 272 TYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           TYN+L+ G C  GR+ EAR L  ++  +G  P+ V+Y TLI GY    D+++A+++R+ M
Sbjct: 396 TYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEM 455

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
             KG  P ++TYN++++ LC  G+  DA  L+ EM    I PD+ T  +LI  
Sbjct: 456 MGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVGNGITPDDSTYISLIEG 508



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 59/204 (28%), Positives = 109/204 (53%), Gaps = 2/204 (0%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           +++F+ M    +   +   T L+++L+   +     +++   V+ G+  ++ +YN LI++
Sbjct: 309 MKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALINS 368

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
            C   D+D+  +++ EME K +  D  TYNTL+   C  G   EA  + + M + GI PD
Sbjct: 369 HCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPD 428

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLRE 327
           +V+YN+LI G+  +G +++A ++  ++  KG  P  +TY  +I G C      +A  L +
Sbjct: 429 LVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVK 488

Query: 328 VMAAKGVYPGVVTYNSILRKLCKE 351
            M   G+ P   TY S++  L  E
Sbjct: 489 EMVGNGITPDDSTYISLIEGLTTE 512


>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 641

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 128/519 (24%), Positives = 233/519 (44%), Gaps = 55/519 (10%)

Query: 80  SHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIF 139
           +++ ++  L        A  +L+++ LR   +TP + + +++      G    +  L + 
Sbjct: 110 TYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVL 169

Query: 140 YA----------NLKMT--------QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLT 181
           +A          NL ++         +G+++  ++      P + +   +L  L   +  
Sbjct: 170 HAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRW 229

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
           D V ++  +MV++G   N+  +N LI   C++   ++V + L +M       DL  Y T+
Sbjct: 230 DDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATI 289

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI----- 296
           I   CK G H  A  +  RM   G+ P++V YN+++ G C   R  EA  L  ++     
Sbjct: 290 IDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDC 349

Query: 297 --------------------------------KGATPNHVTYTTLIDGYCRANDLEEALR 324
                                            G  P+ +TYTT+I+G+C+   ++EA+ 
Sbjct: 350 PLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVM 409

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           L + M+A G  P  ++Y  +L+ LC+  R  DA  L++ M ++   P+ VT NTLIN  C
Sbjct: 410 LLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMC 469

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           K G    A+++  +ML  G   D  +Y  +I G  KA + + A ELL  M++ G +P+  
Sbjct: 470 KKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTI 529

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
            YS +      +   + ++++ D      +  D ++Y A+I   CK+ + D A   F  M
Sbjct: 530 IYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYM 589

Query: 505 QGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRR 543
             NG + +   YT L       G  +   D+L ++  RR
Sbjct: 590 VSNGCMPNESTYTILIRGLASEGLVREAQDLLSELCSRR 628



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 117/433 (27%), Positives = 205/433 (47%), Gaps = 9/433 (2%)

Query: 145 MTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYN 204
           +  D L V D+M +         C V+L +  +        +  + +   G   +    N
Sbjct: 123 LIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCN 182

Query: 205 VLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYC--KKGMHYEALAVQDRME 262
           +++ A C+   VD+  +LL ++       D+ +YN ++   C  K+    E L V+  M 
Sbjct: 183 LVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVE--MV 240

Query: 263 REGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLE 320
           R G  P++ T+N+LI   CR G   +       +   G TP+   Y T+IDG C+    E
Sbjct: 241 RVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHE 300

Query: 321 EALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLI 380
            A  +   M + G+ P VV YN++L+ LC   R  +A  LL EM ++    D+VT N L+
Sbjct: 301 VANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILV 360

Query: 381 NAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFS 440
           + +C+ G     +++  +MLE G + D  TY  +I+GFCK   +D A  LL  M   G  
Sbjct: 361 DFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCK 420

Query: 441 PSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRL 500
           P+  SY+ ++ G C         +L+   + +G   +   +  LI   CKK  V+ A  L
Sbjct: 421 PNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIEL 480

Query: 501 FNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAK 560
              M  NG   D + Y+++     +AG+ +   ++L+ M  + +     IY S +++ ++
Sbjct: 481 LKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSR 540

Query: 561 D---NEILDLFWS 570
           +   ++I+ +F S
Sbjct: 541 EGRTDKIIQMFDS 553



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 86/335 (25%), Positives = 145/335 (43%), Gaps = 5/335 (1%)

Query: 195 GVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEA 254
           G  A +  YN +I   C++  V    +L   +    V  + +TY  ++   C +G+  +A
Sbjct: 71  GDAAGVVAYNAMIAGYCRAGQVAAARRLAAAVP---VPPNAYTYFPIVRSLCARGLIADA 127

Query: 255 LAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDG 312
           L V D M   G +      + ++   CR G  R A R  + +  KG T +      ++  
Sbjct: 128 LTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSA 187

Query: 313 YCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPD 372
            C    ++E + L   + + G  P +V+YN++L+ LC   R  D   L+ EM      P+
Sbjct: 188 ICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPN 247

Query: 373 NVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLF 432
             T NTLI   C+ G      +  ++M E G   D   Y  +I G CK    ++A ++L 
Sbjct: 248 VATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILS 307

Query: 433 GMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKE 492
            M   G  P+   Y+ ++ G C+    E    LL E       +D   +  L+  FC+  
Sbjct: 308 RMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNG 367

Query: 493 KVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
            VD    L   M  +G + D + YT++   + + G
Sbjct: 368 LVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEG 402



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 76/304 (25%), Positives = 136/304 (44%), Gaps = 4/304 (1%)

Query: 239 NTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKG 298
           + LI   C  G   +A    D     G +  +V YN++I G+CR G++  ARRL   +  
Sbjct: 48  SALIRSLCAAGRTADAARALDT---AGDAAGVVAYNAMIAGYCRAGQVAAARRLAAAVP- 103

Query: 299 ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDAN 358
             PN  TY  ++   C    + +AL + + M  +G        + IL   C+ G  R A 
Sbjct: 104 VPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAV 163

Query: 359 RLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGF 418
           R L  ++ K    D+  CN +++A C+ G     +++  ++   G   D  +Y A++ G 
Sbjct: 164 RALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGL 223

Query: 419 CKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDV 478
           C AK  D  +EL+  M+  G  P+  +++ L+   C     E + + L +    G   D+
Sbjct: 224 CMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDL 283

Query: 479 SVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDD 538
            +Y  +I   CK    + A  + + M   G+  + V Y ++      A   +   D+L +
Sbjct: 284 RMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAE 343

Query: 539 MYRR 542
           M++ 
Sbjct: 344 MFQE 347


>gi|225423589|ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Vitis vinifera]
          Length = 644

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 129/450 (28%), Positives = 214/450 (47%), Gaps = 20/450 (4%)

Query: 129 NSHVLSWLVIFYA--NLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWK 186
           + +VLS+ ++  A   L +    ++VF +M +    P +     L++ L K+   D    
Sbjct: 169 SPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVL 228

Query: 187 VYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYC 246
           +  +M   G   +   +NVLI+  CK  D+ +V KL+  M  K    +  TYNT+I   C
Sbjct: 229 LLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLC 288

Query: 247 KKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHV 304
            KG   +A+++ DRM      P+ VTY +LI+G  ++GR  +   L   +  +G   N  
Sbjct: 289 LKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEY 348

Query: 305 TYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM 364
            Y+TLI G  +    EEA+ L + M  KG  P +V Y++++  LC+EG++ +A  +L EM
Sbjct: 349 AYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEM 408

Query: 365 NEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEM 424
             K   P+  T ++LI  + K G++  A++V   M +   + ++  Y  LIHG C+  ++
Sbjct: 409 VNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKL 468

Query: 425 DIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLC------VDV 478
             A  +   ML  G  P   +YS ++ G CN  + E  LKL +E     LC       DV
Sbjct: 469 REAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEM----LCQESDSQPDV 524

Query: 479 SVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAY-WRAGEPKACSDILD 537
             Y  L+R  CK+  + +A  L N M   G   D +       A   +   P+   + LD
Sbjct: 525 VTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLNPPQDGREFLD 584

Query: 538 DMY-----RRRLMITLKIYRSFSASYAKDN 562
           ++      R+R++   KI       +   N
Sbjct: 585 ELVVRLHKRQRIVGAAKIIEVMLQKFLPPN 614



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 113/373 (30%), Positives = 191/373 (51%), Gaps = 4/373 (1%)

Query: 171 LLNSLAKDRLTDMVWKVYKKMV--QLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEF 228
           +LN + ++ L     + Y+  V  +  +  N+  +N++I A CK   VD+  ++  EM  
Sbjct: 141 VLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAI 200

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
           +    D+FTY TL+   CK+    EA+ + D M+ EG  P  VT+N LI+G C++G M  
Sbjct: 201 QKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVR 260

Query: 289 ARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILR 346
             +L  +  +KG  PN VTY T+I+G C    L++A+ L + M A    P  VTY +++ 
Sbjct: 261 VTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLIN 320

Query: 347 KLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLML 406
            L K+GR  D   LL+ + E+    +    +TLI+   K   +  AM +  +M+E G   
Sbjct: 321 GLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQP 380

Query: 407 DQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLL 466
           +   Y ALI G C+  ++D AKE+L  M++ G +P+  +YS L+ G+    N +  +++ 
Sbjct: 381 NIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVW 440

Query: 467 DEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRA 526
            E        +   Y  LI   C+  K+  A  ++  M G G+  D V Y+S+ +    A
Sbjct: 441 KEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNA 500

Query: 527 GEPKACSDILDDM 539
           G  +    + ++M
Sbjct: 501 GSVEVGLKLFNEM 513



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 86/350 (24%), Positives = 159/350 (45%), Gaps = 43/350 (12%)

Query: 270 IVTYNSLIHGFCREGRMREARRLFR-DIKGAT---PNHVTYTTLIDGYCRANDLEEALRL 325
           + ++NS+++   +EG    A   +   + G T   PN +++  +I   C+   ++ A+ +
Sbjct: 135 VRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEV 194

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
              MA +   P V TY +++  LCKE RI +A  LL+EM  +   P +VT N LIN  CK
Sbjct: 195 FREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCK 254

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            GD     K+ + M   G + ++ TY  +I+G C   ++D A  LL  M+ +   P+  +
Sbjct: 255 KGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVT 314

Query: 446 YSWLVDG------------------------------------YCNKNNEEALLKLLDEF 469
           Y  L++G                                    +  + +EEA + L  + 
Sbjct: 315 YGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEA-MGLWKKM 373

Query: 470 VSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEP 529
           V +G   ++ VY ALI   C++ K+D A+ +   M   G   ++  Y+SL   +++ G  
Sbjct: 374 VEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNS 433

Query: 530 KACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD--LFWSHVVDRGL 577
           +    +  +M +   +     Y        +D ++ +  + W+H++ RGL
Sbjct: 434 QKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGL 483



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 73/298 (24%), Positives = 127/298 (42%), Gaps = 60/298 (20%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           DG+ +   +       + +A + L++ L K+  ++    ++KKMV+ G   NI +Y+ LI
Sbjct: 330 DGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALI 389

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY---------------------- 245
              C+   +D+ +++LCEM  K    + FTY++LI  +                      
Sbjct: 390 DGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCV 449

Query: 246 -------------CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRL 292
                        C+ G   EA+ +   M   G+ PD+V Y+S+IHG C  G +    +L
Sbjct: 450 PNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKL 509

Query: 293 FRDI----KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILR-- 346
           F ++      + P+ VTY  L+   C+ N +  A+ L   M  +G  P ++T N  L   
Sbjct: 510 FNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNAL 569

Query: 347 -------------------KLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
                              +L K  RI  A +++  M +K + P+  T   +I   CK
Sbjct: 570 REKLNPPQDGREFLDELVVRLHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELCK 627


>gi|125582652|gb|EAZ23583.1| hypothetical protein OsJ_07284 [Oryza sativa Japonica Group]
          Length = 667

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 113/394 (28%), Positives = 187/394 (47%), Gaps = 6/394 (1%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           + +++F +M      P +H    L+  L      +    + ++M +LG   +   Y  ++
Sbjct: 63  EAVELFGEMD----QPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVV 118

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
              C+     + E++L EM  K +   + T   +I  YCK+G   +AL V + M+  G  
Sbjct: 119 DFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCK 178

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRL 325
           P++ TYN+L+ GFC EG++ +A  L   ++  G  P+ VTY  LI G C    +E A RL
Sbjct: 179 PNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRL 238

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
             +M   G+     TYN+++  LCK+GR   A  L + +  + I P+ VT N+LIN  CK
Sbjct: 239 LRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCK 298

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            G    A K   +M+ AG   D +TY + I   CK K        +  ML     PS  +
Sbjct: 299 SGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVN 358

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+ ++     + N   + +   E VS G   DV  Y   +R +C + +++ A+ +   M 
Sbjct: 359 YTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMS 418

Query: 506 GNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
            NG+  D++ Y +L   +   G+      IL  M
Sbjct: 419 KNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQM 452



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 106/323 (32%), Positives = 158/323 (48%), Gaps = 2/323 (0%)

Query: 232 RADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARR 291
           R D +T+N+LI  YC+      A  + D+M   G + D+V+Y +LI G C  GR+ EA  
Sbjct: 7   RPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVE 66

Query: 292 LFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
           LF ++    P+   Y  L+ G C A   EE L +   M   G  P    Y +++   C+E
Sbjct: 67  LFGEMD--QPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRE 124

Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
            + ++A  +L EM EK +AP  VTC  +INAYCK G  + A++V   M   G   + +TY
Sbjct: 125 RKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTY 184

Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
            AL+ GFC   ++  A  LL  M   G +P   +Y+ L+ G C   + E+  +LL     
Sbjct: 185 NALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEG 244

Query: 472 RGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKA 531
            GL  D   Y ALI   CK  + D A  LF+ ++  GI  ++V + SL     ++G+   
Sbjct: 245 DGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADI 304

Query: 532 CSDILDDMYRRRLMITLKIYRSF 554
               L+ M           Y SF
Sbjct: 305 AWKFLEKMVSAGCTPDTYTYSSF 327



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 113/436 (25%), Positives = 200/436 (45%), Gaps = 8/436 (1%)

Query: 126 PDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVW 185
           PD  ++  + L++ Y           +FD+M +      + +   L+  L +    D   
Sbjct: 8   PD--AYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAV 65

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
           +++ +M Q     ++H+Y  L+   C +   ++   +L  M+    R     Y  ++   
Sbjct: 66  ELFGEMDQ----PDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFR 121

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR--DIKGATPNH 303
           C++    EA  +   M  +G++P +VT  ++I+ +C+EGRM +A R+     ++G  PN 
Sbjct: 122 CRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNV 181

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
            TY  L+ G+C    + +A+ L   M A GV P  VTYN ++R  C +G I  A RLL  
Sbjct: 182 WTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRL 241

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
           M    +  D  T N LINA CK G T  A  + + +   G+  +  T+ +LI+G CK+ +
Sbjct: 242 MEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGK 301

Query: 424 MDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRA 483
            DIA + L  M+ AG +P   +YS  ++  C     +  L  + E + + +      Y  
Sbjct: 302 ADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTI 361

Query: 484 LIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRR 543
           +I +  K+       R +  M  +G   D V YT+   AY   G      ++L +M +  
Sbjct: 362 VIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNG 421

Query: 544 LMITLKIYRSFSASYA 559
           + +    Y +    +A
Sbjct: 422 VTVDTMAYNTLMDGHA 437



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 105/360 (29%), Positives = 163/360 (45%), Gaps = 33/360 (9%)

Query: 191 MVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKG- 249
           MV+ G   + + +N LI   C+++ VD    L  +M  +    D+ +Y TLI   C+ G 
Sbjct: 1   MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR 60

Query: 250 ---------------MHY---------------EALAVQDRMEREGISPDIVTYNSLIHG 279
                          MH                E L +  RM+  G  P    Y +++  
Sbjct: 61  IDEAVELFGEMDQPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDF 120

Query: 280 FCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPG 337
            CRE + +EA  + +++  KG  P  VT T +I+ YC+   + +ALR+ E+M  +G  P 
Sbjct: 121 RCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPN 180

Query: 338 VVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKN 397
           V TYN++++  C EG++  A  LLN+M    + PD VT N LI   C  G   SA ++  
Sbjct: 181 VWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLR 240

Query: 398 RMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKN 457
            M   GL+ DQ+TY ALI+  CK    D A  L   +   G  P+  +++ L++G C   
Sbjct: 241 LMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSG 300

Query: 458 NEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYT 517
             +   K L++ VS G   D   Y + I   CK +           M    +   +V YT
Sbjct: 301 KADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYT 360



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 111/451 (24%), Positives = 197/451 (43%), Gaps = 21/451 (4%)

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKD-RLTDMVWKVYKKMVQL 194
           +V F    +  ++  ++  +M    L P +  CT ++N+  K+ R++D + +V + M   
Sbjct: 117 VVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDAL-RVLELMKLR 175

Query: 195 GVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEA 254
           G   N+  YN L+   C    V K   LL +M    V  D  TYN LI   C  G    A
Sbjct: 176 GCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESA 235

Query: 255 LAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR--DIKGATPNHVTYTTLIDG 312
             +   ME +G+  D  TYN+LI+  C++GR  +A  LF   + +G  PN VT+ +LI+G
Sbjct: 236 FRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLING 295

Query: 313 YCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPD 372
            C++   + A +  E M + G  P   TY+S +  LCK    ++    + EM +K + P 
Sbjct: 296 LCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPS 355

Query: 373 NVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLF 432
            V    +I+   K  +     +    M+ +G   D  TY   +  +C    ++ A+ +L 
Sbjct: 356 TVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLM 415

Query: 433 GMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKE 492
            M   G +    +Y+ L+DG+ +    +  + +L +  S     +   Y  L+R   +  
Sbjct: 416 EMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMR 475

Query: 493 KVDYAQR-----------------LFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDI 535
            V+                     LF++M+ N  L +S  Y+S+   +   G  +  + +
Sbjct: 476 LVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSL 535

Query: 536 LDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
           +  M    + +   IY +    + K    LD
Sbjct: 536 VSLMKEDSISLNEDIYTALVTCFCKSKRYLD 566



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 131/571 (22%), Positives = 230/571 (40%), Gaps = 93/571 (16%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHV 132
            ++ S +++  ++    + +  K A+ ML+++  +     P V+     I+         
Sbjct: 106 GWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGL--APCVVTCTAVINA-------- 155

Query: 133 LSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMV 192
                  Y       D L+V + M++    P++     L+     +        +  KM 
Sbjct: 156 -------YCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMR 208

Query: 193 QLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHY 252
             GV  +   YN+LI   C    ++   +LL  ME   + AD +TYN LI   CK G   
Sbjct: 209 ACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTD 268

Query: 253 EALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLI 310
           +A ++ D +E  GI P+ VT+NSLI+G C+ G+   A +    +   G TP+  TY++ I
Sbjct: 269 QACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFI 328

Query: 311 DGYCRANDLEEAL-----------------------------------RLREVMAAKGVY 335
           +  C+    +E L                                   R    M + G  
Sbjct: 329 EHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCN 388

Query: 336 PGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKV 395
           P VVTY + +R  C EGR+ +A  +L EM++  +  D +  NTL++ +  IG T  A+ +
Sbjct: 389 PDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSI 448

Query: 396 KNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL-------------LFGMLDA----G 438
             +M     + +QFTY  L+    + + ++    L             +FG+ D      
Sbjct: 449 LKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNE 508

Query: 439 FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQ 498
           F P+  +YS +++G+      E    L+       + ++  +Y AL+  FCK ++   A 
Sbjct: 509 FLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAW 568

Query: 499 RLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASY 558
            L   M  +G +   + Y  L       G+     +I                  F  S 
Sbjct: 569 VLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEI------------------FMNSR 610

Query: 559 AKDNEILDLFWSHVVDRGLMSK---HIFKEM 586
            KD    ++ W  ++D GL+ K    I +EM
Sbjct: 611 WKDYSPDEIVWKVIID-GLIKKGHSDISREM 640



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 66/222 (29%), Positives = 109/222 (49%), Gaps = 4/222 (1%)

Query: 298 GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDA 357
           G  P+  T+ +LI GYCR N ++ A  L + M  +G    VV+Y +++  LC+ GRI +A
Sbjct: 5   GWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEA 64

Query: 358 NRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHG 417
             L  EM++    PD      L+   C        + +  RM E G       Y A++  
Sbjct: 65  VELFGEMDQ----PDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDF 120

Query: 418 FCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVD 477
            C+ ++   A+E+L  M + G +P   + + +++ YC +      L++L+    RG   +
Sbjct: 121 RCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPN 180

Query: 478 VSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
           V  Y AL++ FC + KV  A  L N M+  G+  D+V Y  L
Sbjct: 181 VWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLL 222



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 81/194 (41%), Gaps = 4/194 (2%)

Query: 371 PDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL 430
           PD  T N+LI  YC+      A  + ++M   G   D  +Y  LI G C+A  +D A EL
Sbjct: 8   PDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVEL 67

Query: 431 LFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCK 490
            FG +D    P    Y+ LV G CN    E  L +L      G       Y A++   C+
Sbjct: 68  -FGEMD---QPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCR 123

Query: 491 KEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKI 550
           + K   A+ +   M   G+    V  T++  AY + G       +L+ M  R     +  
Sbjct: 124 ERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWT 183

Query: 551 YRSFSASYAKDNEI 564
           Y +    +  + ++
Sbjct: 184 YNALVQGFCNEGKV 197



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/168 (22%), Positives = 79/168 (47%), Gaps = 4/168 (2%)

Query: 399 MLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNN 458
           M+ +G   D +T+ +LI G+C+  ++D+A++L   M   GF+    SY+ L++G C    
Sbjct: 1   MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR 60

Query: 459 EEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTS 518
            +  ++L  E        D+ +Y AL++  C  E+ +    +   M+  G    +  Y +
Sbjct: 61  IDEAVELFGEMDQP----DMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAA 116

Query: 519 LAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
           +     R  + K   ++L +M+ + L   +    +   +Y K+  + D
Sbjct: 117 VVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSD 164



 Score = 44.3 bits (103), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 35/166 (21%), Positives = 69/166 (41%), Gaps = 2/166 (1%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D   +FD M+ +  +P+    + +L   ++D  T+    +   M +  +  N  +Y  L+
Sbjct: 496 DVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALV 555

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
              CKS        L+C M        L +Y  L++    +G   +A  +      +  S
Sbjct: 556 TCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYS 615

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLID 311
           PD + +  +I G  ++G    +R +   ++     P+H TY  L +
Sbjct: 616 PDEIVWKVIIDGLIKKGHSDISREMIIMLERMNCRPSHQTYAMLTE 661


>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
 gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
          Length = 797

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 117/419 (27%), Positives = 194/419 (46%), Gaps = 5/419 (1%)

Query: 140 YANLKMTQDGLQVFDQM---RVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGV 196
           + N K  ++ L++   M   +  +  P++ +   ++N    +   D  + ++ +M+  G+
Sbjct: 175 FCNEKRAEEALELLHMMADSQGRSCPPNVVSYATVINGFFTEGQVDKAYNLFLEMMDRGI 234

Query: 197 VANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALA 256
             N+  Y  +I   CK+  VD+ E +  +M  K V+ D  TYN LI  Y   G   E + 
Sbjct: 235 QPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVR 294

Query: 257 VQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYC 314
           + + M   G+ PD  TY SL++  C  GR REAR  F  +  KG  PN   Y  LI GY 
Sbjct: 295 MLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYA 354

Query: 315 RANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNV 374
               L E   L  +M   G+ P    +N I     K+  I +A  + N+M ++ ++PD V
Sbjct: 355 TKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVV 414

Query: 375 TCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGM 434
               LI+A CK+G    A+   N+M+  G+  + F + +L++G C   + + AKE  F M
Sbjct: 415 NFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEM 474

Query: 435 LDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKV 494
           L+ G  P    ++ ++   C K       +L+D     G   DV  Y  LI   C   ++
Sbjct: 475 LNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRI 534

Query: 495 DYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRS 553
           D A +  ++M   G+  D   Y +L + Y RAG       +  +M R  +   +  Y +
Sbjct: 535 DEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYST 593



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 105/379 (27%), Positives = 189/379 (49%), Gaps = 4/379 (1%)

Query: 126 PDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVW 185
           PD +++  + L+  Y ++   ++ +++ ++M  H L P  +    LLN L  +       
Sbjct: 271 PDNDTY--NCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREAR 328

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
             +  M++ G+  N+ +Y +LIH       + ++  LL  M    +  D   +N +   Y
Sbjct: 329 FFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAY 388

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNH 303
            KK M  EA+ + ++M+++G+SPD+V + +LI   C+ GR+ +A   F  +  +G  PN 
Sbjct: 389 AKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNI 448

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
             + +L+ G C  +  E+A      M  +G+ P VV +N+IL  LC +G++  A RL++ 
Sbjct: 449 FVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDL 508

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
           M      PD ++  TLI  +C +G    A K  + ML  GL  D++TY  L+HG+C+A  
Sbjct: 509 MERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGR 568

Query: 424 MDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRA 483
           +D A  +   ML  G +P   +YS ++ G           +L    ++ G   ++ +Y  
Sbjct: 569 IDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNI 628

Query: 484 LIRRFCKKEKVDYAQRLFN 502
           ++    K   VD A +LF 
Sbjct: 629 ILNGLSKNNCVDEAFKLFQ 647



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 102/376 (27%), Positives = 180/376 (47%), Gaps = 2/376 (0%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
            +F +M    + P++   T +++ L K ++ D    V+++M+  GV  +   YN LIH  
Sbjct: 224 NLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGY 283

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
                  +V ++L EM    ++ D +TY +L+   C  G   EA    D M R+GI P++
Sbjct: 284 LSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNV 343

Query: 271 VTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
             Y  LIHG+  +G + E   L   +   G +P+H  +  +   Y +   ++EA+ +   
Sbjct: 344 AIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNK 403

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M  +G+ P VV + +++  LCK GR+ DA    N+M  + +AP+    N+L+   C +  
Sbjct: 404 MKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDK 463

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
              A +    ML  G+  D   +  ++   C   ++  A+ L+  M   G  P   SY+ 
Sbjct: 464 WEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTT 523

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG 508
           L+ G+C     +   K LD  +S GL  D   Y  L+  +C+  ++D A  +F  M  NG
Sbjct: 524 LIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNG 583

Query: 509 ILGDSVIYTSLAYAYW 524
           I    V Y+++ +  +
Sbjct: 584 ITPGVVTYSTILHGLF 599



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 108/396 (27%), Positives = 186/396 (46%), Gaps = 16/396 (4%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAK-------DRLTDMVWKVYKKMVQ---LGVV 197
           D L++FD +  H     + A   LL ++++          +++V  ++ +M++   + V 
Sbjct: 32  DALKLFDGLLTHARPASIIAFNHLLTAVSRVSGRRSSTTESELVVSLFNRMIRECTIKVT 91

Query: 198 ANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAV 257
            ++  Y++LI   C+   ++        +     R +    N L+   C      EA+ +
Sbjct: 92  PDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREAMDI 151

Query: 258 Q-DRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR---DIKGAT--PNHVTYTTLID 311
              RM   G +PD+V+YN+L+ GFC E R  EA  L     D +G +  PN V+Y T+I+
Sbjct: 152 LIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATVIN 211

Query: 312 GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAP 371
           G+     +++A  L   M  +G+ P VVTY +++  LCK   +  A  +  +M +K + P
Sbjct: 212 GFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKP 271

Query: 372 DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
           DN T N LI+ Y  IG     +++   M   GL  D +TY +L++  C       A+   
Sbjct: 272 DNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFF 331

Query: 432 FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
             M+  G  P+   Y  L+ GY  K     +  LL+  V  GL  D  ++  +   + KK
Sbjct: 332 DSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKK 391

Query: 492 EKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
             +D A  +FN M+  G+  D V + +L  A  + G
Sbjct: 392 AMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLG 427



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 98/402 (24%), Positives = 184/402 (45%), Gaps = 2/402 (0%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N  +   L+  YA      +   + + M  + L P  H   ++  + AK  + D    ++
Sbjct: 342 NVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIF 401

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
            KM Q G+  ++  +  LI A CK   VD       +M  + V  ++F +N+L+   C  
Sbjct: 402 NKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTV 461

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTY 306
               +A      M  +GI PD+V +N+++   C +G++ +A+RL   ++  G  P+ ++Y
Sbjct: 462 DKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISY 521

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
           TTLI G+C    ++EA +  +VM + G+ P   TYN++L   C+ GRI DA  +  EM  
Sbjct: 522 TTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLR 581

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
             I P  VT +T+++        + A ++   M+ +G   + + Y  +++G  K   +D 
Sbjct: 582 NGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDE 641

Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
           A +L   +    F     +++ ++         E  + L     S GL  DV  Y  +  
Sbjct: 642 AFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAE 701

Query: 487 RFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
              ++  ++    LF+ M+ +G   +S +  +L       G+
Sbjct: 702 NLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGD 743



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/284 (24%), Positives = 121/284 (42%), Gaps = 38/284 (13%)

Query: 169 TVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEF 228
           T+L N   K ++     ++   M ++G   ++  Y  LI   C    +D+  K L  M  
Sbjct: 488 TILCNLCTKGQVMK-AQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLS 546

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
             ++ D +TYNTL+  YC+ G   +A  V   M R GI+P +VTY++++HG     R  E
Sbjct: 547 VGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSE 606

Query: 289 ARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAK-------------- 332
           A+ L+ ++   G   N   Y  +++G  + N ++EA +L + + +K              
Sbjct: 607 AKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIG 666

Query: 333 ---------------------GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAP 371
                                G+ P V TY  I   L +EG + + + L + M +    P
Sbjct: 667 ALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTP 726

Query: 372 DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALI 415
           ++   N L+      GD   A    +++ E    L+  T   LI
Sbjct: 727 NSRMLNALVRRLLHRGDITRAGAYLSKLDEKNFSLEASTTAMLI 770



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 52/231 (22%), Positives = 97/231 (41%), Gaps = 2/231 (0%)

Query: 153 FDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCK 212
            D M    L P       LL+   +    D  + V+++M++ G+   +  Y+ ++H    
Sbjct: 541 LDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFT 600

Query: 213 SSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVT 272
           +    + ++L   M     + +++ YN ++    K     EA  +   +  +    +I T
Sbjct: 601 TRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITT 660

Query: 273 YNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMA 330
           +N +I    + GR  +A  LF  I   G  P+  TY  + +       LEE   L   M 
Sbjct: 661 FNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAME 720

Query: 331 AKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
             G  P     N+++R+L   G I  A   L++++EK  + +  T   LI+
Sbjct: 721 KSGTTPNSRMLNALVRRLLHRGDITRAGAYLSKLDEKNFSLEASTTAMLIS 771


>gi|222612695|gb|EEE50827.1| hypothetical protein OsJ_31237 [Oryza sativa Japonica Group]
          Length = 550

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 107/331 (32%), Positives = 179/331 (54%), Gaps = 4/331 (1%)

Query: 126 PDGNS-HVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMV 184
           PDG +   L  L    A  K        F  MR H L+P + +C V +++    R  ++ 
Sbjct: 178 PDGGAVPALDVLFSVCARGKKLSLATLAFRAMRAHGLLPRVVSCNVFISAALGLRRPEIA 237

Query: 185 WKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIAL 244
              +++M +  +  NI+  N+++ A C         ++L +M    V     ++NTLIA 
Sbjct: 238 LSFFREMRRCRISPNIYTANMVLRAFCDLGRTADAAEVLDKMPEWGVGRTTVSFNTLIAA 297

Query: 245 YCKKGMHY-EALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATP 301
           YC+ G+    AL ++ +ME+EG+ PD+VTY+++IHG C+EGRM +A ++  +  +KG  P
Sbjct: 298 YCRDGVDAGPALQLKMKMEQEGLVPDVVTYDTIIHGLCKEGRMGKANQVLSEMRVKGVMP 357

Query: 302 NHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLL 361
           N VTY TLI GY    D   A R+ E M    V   +VTYN+++  LC EG+++    LL
Sbjct: 358 NTVTYNTLIHGYVALGDNAMAGRVHEEMVKNRVELDIVTYNALILGLCNEGKMKKVEHLL 417

Query: 362 NEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKA 421
            E++  K+ P+  T + LI  +CK+ ++  A+++ N M ++G   +  TYK +I  FCK 
Sbjct: 418 RELDRAKLEPNASTFSALIVGWCKMQNSERALQLLNVMKKSGFHPNYTTYKMVISSFCKN 477

Query: 422 KEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
           K+++ A +++  ML    +P     +   DG
Sbjct: 478 KDLEGAVDVMGDMLGRCIAPDKALLNEFFDG 508



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 97/276 (35%), Positives = 145/276 (52%), Gaps = 3/276 (1%)

Query: 254 ALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLID 311
           AL+    M R  ISP+I T N ++  FC  GR  +A  +   +   G     V++ TLI 
Sbjct: 237 ALSFFREMRRCRISPNIYTANMVLRAFCDLGRTADAAEVLDKMPEWGVGRTTVSFNTLIA 296

Query: 312 GYCRAN-DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIA 370
            YCR   D   AL+L+  M  +G+ P VVTY++I+  LCKEGR+  AN++L+EM  K + 
Sbjct: 297 AYCRDGVDAGPALQLKMKMEQEGLVPDVVTYDTIIHGLCKEGRMGKANQVLSEMRVKGVM 356

Query: 371 PDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL 430
           P+ VT NTLI+ Y  +GD A A +V   M++  + LD  TY ALI G C   +M   + L
Sbjct: 357 PNTVTYNTLIHGYVALGDNAMAGRVHEEMVKNRVELDIVTYNALILGLCNEGKMKKVEHL 416

Query: 431 LFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCK 490
           L  +  A   P+  ++S L+ G+C   N E  L+LL+     G   + + Y+ +I  FCK
Sbjct: 417 LRELDRAKLEPNASTFSALIVGWCKMQNSERALQLLNVMKKSGFHPNYTTYKMVISSFCK 476

Query: 491 KEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRA 526
            + ++ A  +   M G  I  D  +        W+A
Sbjct: 477 NKDLEGAVDVMGDMLGRCIAPDKALLNEFFDGLWKA 512



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 83/315 (26%), Positives = 131/315 (41%), Gaps = 48/315 (15%)

Query: 293 FRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
           FR ++  G  P  V+    I         E AL     M    + P + T N +LR  C 
Sbjct: 206 FRAMRAHGLLPRVVSCNVFISAALGLRRPEIALSFFREMRRCRISPNIYTANMVLRAFCD 265

Query: 351 EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG-DTASAMKVKNRMLEAGLMLDQF 409
            GR  DA  +L++M E  +    V+ NTLI AYC+ G D   A+++K +M + GL+ D  
Sbjct: 266 LGRTADAAEVLDKMPEWGVGRTTVSFNTLIAAYCRDGVDAGPALQLKMKMEQEGLVPDVV 325

Query: 410 TYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGY---------------- 453
           TY  +IHG CK   M  A ++L  M   G  P+  +Y+ L+ GY                
Sbjct: 326 TYDTIIHGLCKEGRMGKANQVLSEMRVKGVMPNTVTYNTLIHGYVALGDNAMAGRVHEEM 385

Query: 454 -------------------CNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKV 494
                              CN+   + +  LL E     L  + S + ALI  +CK +  
Sbjct: 386 VKNRVELDIVTYNALILGLCNEGKMKKVEHLLRELDRAKLEPNASTFSALIVGWCKMQNS 445

Query: 495 DYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSF 554
           + A +L N+M+ +G   +   Y  +  ++ +  + +   D++ DM          + R  
Sbjct: 446 ERALQLLNVMKKSGFHPNYTTYKMVISSFCKNKDLEGAVDVMGDM----------LGRCI 495

Query: 555 SASYAKDNEILDLFW 569
           +   A  NE  D  W
Sbjct: 496 APDKALLNEFFDGLW 510



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 70/271 (25%), Positives = 111/271 (40%), Gaps = 38/271 (14%)

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRL-TDMVWKVYKKMVQLGVVA 198
           + +L  T D  +V D+M    +     +   L+ +  +D +      ++  KM Q G+V 
Sbjct: 263 FCDLGRTADAAEVLDKMPEWGVGRTTVSFNTLIAAYCRDGVDAGPALQLKMKMEQEGLVP 322

Query: 199 NIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQ 258
           ++  Y+ +IH  CK   + K  ++L EM  K V  +  TYNTLI  Y   G +  A  V 
Sbjct: 323 DVVTYDTIIHGLCKEGRMGKANQVLSEMRVKGVMPNTVTYNTLIHGYVALGDNAMAGRVH 382

Query: 259 DRMEREGISPDIVTYNSLI-----------------------------------HGFCRE 283
           + M +  +  DIVTYN+LI                                    G+C+ 
Sbjct: 383 EEMVKNRVELDIVTYNALILGLCNEGKMKKVEHLLRELDRAKLEPNASTFSALIVGWCKM 442

Query: 284 GRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTY 341
                A +L   +K  G  PN+ TY  +I  +C+  DLE A+ +   M  + + P     
Sbjct: 443 QNSERALQLLNVMKKSGFHPNYTTYKMVISSFCKNKDLEGAVDVMGDMLGRCIAPDKALL 502

Query: 342 NSILRKLCKEGRIRDANRLLNEMNEKKIAPD 372
           N     L K  ++  A  L +  N  K  PD
Sbjct: 503 NEFFDGLWKAKKLHLAENLRSLNNGLKFIPD 533


>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
 gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
          Length = 500

 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 119/421 (28%), Positives = 197/421 (46%), Gaps = 3/421 (0%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           ++  +V ++M      P + A   ++   A+    +   +VY+ MV+ G   +   Y++L
Sbjct: 27  EESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHIL 86

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           IH   K   +D+  K+L EM  +     +  Y++L+    K      A ++ D M R G 
Sbjct: 87  IHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARRVDHASSLFDEMIRGGH 146

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALR 324
            PD + +  LI G C+ G++++A   F+ +   G  PN   Y  L+ G C +  LE+A  
Sbjct: 147 HPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANT 206

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           L   M +    P VVTYN++L  +CK  R+ +  +L   M      P+ +T +TLI+  C
Sbjct: 207 LFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLC 266

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           + G+   A++V   MLEAG   +++TY  LI G C+A+++  A+EL   M  A   P   
Sbjct: 267 RTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAV 326

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFV-SRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNL 503
           +Y+ L+ GYC + + +   KL  E     GL   +  +  LI  FCK  K+  A  L   
Sbjct: 327 AYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAE 386

Query: 504 MQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNE 563
           M   G+  DS  Y  L     RA +     ++   M  ++ ++      SF     K   
Sbjct: 387 MGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGN 446

Query: 564 I 564
           I
Sbjct: 447 I 447



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 117/419 (27%), Positives = 193/419 (46%), Gaps = 3/419 (0%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           +V+  M      P   +  +L++ LAK    D   K+  +MV  G   ++  Y+ L+ A 
Sbjct: 66  EVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRAL 125

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
            K+  VD    L  EM       D   +  LI   C+ G   +A     +M + G  P++
Sbjct: 126 AKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNV 185

Query: 271 VTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREV 328
             YN L+HG C  G++ +A  LF ++K    +P+ VTY TL+D  C+A  +EE  +L E 
Sbjct: 186 PVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEA 245

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M A G  P V+T+++++  LC+ G +  A  +   M E    P+  T  TLI+  C+   
Sbjct: 246 MRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEK 305

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGML-DAGFSPSYCSYS 447
              A ++  +M +A +  D   Y +LI G+CK   MD A++L   M   AG  P+  +++
Sbjct: 306 VIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFN 365

Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGN 507
            L+DG+C         +L+ E  ++GL  D   YR LI    +  K+D A  ++  M+  
Sbjct: 366 TLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREK 425

Query: 508 GILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
             L D V   S      + G       + +   +   +   + +R  S S  K   + D
Sbjct: 426 KFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVED 484



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 127/434 (29%), Positives = 196/434 (45%), Gaps = 22/434 (5%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHV 132
            YK    S+  +IH L K      +  +L ++ +R    TPS+                 
Sbjct: 75  GYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRG--QTPSM---------------QA 117

Query: 133 LSWLVIFYANLKMTQDGLQVFDQMRVHNLMP-HLHACTVLLNSLAKDRLTDMVWKVYKKM 191
            S LV   A  +       +FD+M      P  L    ++L      ++ D   + +K+M
Sbjct: 118 YSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASER-FKQM 176

Query: 192 VQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMH 251
            + G   N+ +YNVL+H  C S  +++   L  EM+      D+ TYNTL+   CK    
Sbjct: 177 PKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRV 236

Query: 252 YEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTL 309
            E   + + M   G  P+++T+++LIHG CR G + +A  +F  +   G  PN  TYTTL
Sbjct: 237 EEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTL 296

Query: 310 IDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKK- 368
           I G CRA  + +A  L E M    + P  V YNS++   CK G + +A +L  EM+    
Sbjct: 297 ISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAG 356

Query: 369 IAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAK 428
           + P  VT NTLI+ +CK+G    A ++   M   GL  D  TY+ LI G  +A ++D A 
Sbjct: 357 LQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEAL 416

Query: 429 ELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRF 488
           E+   M +  F     S    V G C   N +    + +     G   +   +R L    
Sbjct: 417 EVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESL 476

Query: 489 CKKEKVDYAQRLFN 502
            K  +V+ AQ+L  
Sbjct: 477 IKLGRVEDAQKLME 490



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 107/412 (25%), Positives = 200/412 (48%), Gaps = 3/412 (0%)

Query: 156 MRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSD 215
           MR  N+  ++   + ++ SL K+   +  +KV ++M+  G   ++  +N ++    +S++
Sbjct: 1   MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60

Query: 216 VDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNS 275
           ++K  ++   M     + D  +Y+ LI    K G   E+L +   M   G +P +  Y+S
Sbjct: 61  MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSS 120

Query: 276 LIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKG 333
           L+    +  R+  A  LF ++   G  P+ + +  LI G C+A  +++A    + M   G
Sbjct: 121 LVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHG 180

Query: 334 VYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAM 393
             P V  YN +L  LC  G++  AN L  EM     +PD VT NTL++A CK        
Sbjct: 181 CQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGC 240

Query: 394 KVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGY 453
           K+   M  AG + +  T+  LIHG C+  E++ A E+   ML+AG  P+  +Y+ L+ G 
Sbjct: 241 KLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGL 300

Query: 454 CNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDS 513
           C         +L ++     +  D   Y +LI  +CK+  +D A++L+  M G   L  +
Sbjct: 301 CRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPT 360

Query: 514 VI-YTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
           ++ + +L   + + G+    ++++ +M  + L      YR   A  ++  ++
Sbjct: 361 IVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKL 412



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 115/433 (26%), Positives = 198/433 (45%), Gaps = 14/433 (3%)

Query: 115 VLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNS 174
           V   +V+    PD  S+ +  L+   A +    + L++  +M +    P + A + L+ +
Sbjct: 67  VYQHMVESGYKPDNVSYHI--LIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRA 124

Query: 175 LAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRAD 234
           LAK R  D    ++ +M++ G   +  ++  LI   C++  V    +   +M     + +
Sbjct: 125 LAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPN 184

Query: 235 LFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR 294
           +  YN L+   C  G   +A  +   M+    SPD+VTYN+L+   C+  R+ E  +LF 
Sbjct: 185 VPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFE 244

Query: 295 DIKGA--TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEG 352
            ++ A   PN +T++TLI G CR  +LE+AL +   M   G  P   TY +++  LC+  
Sbjct: 245 AMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAE 304

Query: 353 RIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLE-AGLMLDQFTY 411
           ++  A  L  +M +  I PD V  N+LI  YCK G    A K+   M   AGL     T+
Sbjct: 305 KVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTF 364

Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
             LI GFCK  ++  A EL+  M   G +   C+Y  L+ G       +  L++  +   
Sbjct: 365 NTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMRE 424

Query: 472 RGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG---- 527
           +   +D     + +   CK   +D A  +F   + +G + +   +  L+ +  + G    
Sbjct: 425 KKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVED 484

Query: 528 -----EPKACSDI 535
                EP    DI
Sbjct: 485 AQKLMEPAKARDI 497


>gi|20279450|gb|AAM18730.1|AC092548_8 hypothetical protein [Oryza sativa Japonica Group]
          Length = 729

 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 107/331 (32%), Positives = 179/331 (54%), Gaps = 4/331 (1%)

Query: 126 PDGNS-HVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMV 184
           PDG +   L  L    A  K        F  MR H L+P + +C V +++    R  ++ 
Sbjct: 357 PDGGAVPALDVLFSVCARGKKLSLATLAFRAMRAHGLLPRVVSCNVFISAALGLRRPEIA 416

Query: 185 WKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIAL 244
              +++M +  +  NI+  N+++ A C         ++L +M    V     ++NTLIA 
Sbjct: 417 LSFFREMRRCRISPNIYTANMVLRAFCDLGRTADAAEVLDKMPEWGVGRTTVSFNTLIAA 476

Query: 245 YCKKGMHY-EALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATP 301
           YC+ G+    AL ++ +ME+EG+ PD+VTY+++IHG C+EGRM +A ++  +  +KG  P
Sbjct: 477 YCRDGVDAGPALQLKMKMEQEGLVPDVVTYDTIIHGLCKEGRMGKANQVLSEMRVKGVMP 536

Query: 302 NHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLL 361
           N VTY TLI GY    D   A R+ E M    V   +VTYN+++  LC EG+++    LL
Sbjct: 537 NTVTYNTLIHGYVALGDNAMAGRVHEEMVKNRVELDIVTYNALILGLCNEGKMKKVEHLL 596

Query: 362 NEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKA 421
            E++  K+ P+  T + LI  +CK+ ++  A+++ N M ++G   +  TYK +I  FCK 
Sbjct: 597 RELDRAKLEPNASTFSALIVGWCKMQNSERALQLLNVMKKSGFHPNYTTYKMVISSFCKN 656

Query: 422 KEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
           K+++ A +++  ML    +P     +   DG
Sbjct: 657 KDLEGAVDVMGDMLGRCIAPDKALLNEFFDG 687



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 97/276 (35%), Positives = 145/276 (52%), Gaps = 3/276 (1%)

Query: 254 ALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLID 311
           AL+    M R  ISP+I T N ++  FC  GR  +A  +   +   G     V++ TLI 
Sbjct: 416 ALSFFREMRRCRISPNIYTANMVLRAFCDLGRTADAAEVLDKMPEWGVGRTTVSFNTLIA 475

Query: 312 GYCRAN-DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIA 370
            YCR   D   AL+L+  M  +G+ P VVTY++I+  LCKEGR+  AN++L+EM  K + 
Sbjct: 476 AYCRDGVDAGPALQLKMKMEQEGLVPDVVTYDTIIHGLCKEGRMGKANQVLSEMRVKGVM 535

Query: 371 PDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL 430
           P+ VT NTLI+ Y  +GD A A +V   M++  + LD  TY ALI G C   +M   + L
Sbjct: 536 PNTVTYNTLIHGYVALGDNAMAGRVHEEMVKNRVELDIVTYNALILGLCNEGKMKKVEHL 595

Query: 431 LFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCK 490
           L  +  A   P+  ++S L+ G+C   N E  L+LL+     G   + + Y+ +I  FCK
Sbjct: 596 LRELDRAKLEPNASTFSALIVGWCKMQNSERALQLLNVMKKSGFHPNYTTYKMVISSFCK 655

Query: 491 KEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRA 526
            + ++ A  +   M G  I  D  +        W+A
Sbjct: 656 NKDLEGAVDVMGDMLGRCIAPDKALLNEFFDGLWKA 691



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 83/315 (26%), Positives = 131/315 (41%), Gaps = 48/315 (15%)

Query: 293 FRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
           FR ++  G  P  V+    I         E AL     M    + P + T N +LR  C 
Sbjct: 385 FRAMRAHGLLPRVVSCNVFISAALGLRRPEIALSFFREMRRCRISPNIYTANMVLRAFCD 444

Query: 351 EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG-DTASAMKVKNRMLEAGLMLDQF 409
            GR  DA  +L++M E  +    V+ NTLI AYC+ G D   A+++K +M + GL+ D  
Sbjct: 445 LGRTADAAEVLDKMPEWGVGRTTVSFNTLIAAYCRDGVDAGPALQLKMKMEQEGLVPDVV 504

Query: 410 TYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGY---------------- 453
           TY  +IHG CK   M  A ++L  M   G  P+  +Y+ L+ GY                
Sbjct: 505 TYDTIIHGLCKEGRMGKANQVLSEMRVKGVMPNTVTYNTLIHGYVALGDNAMAGRVHEEM 564

Query: 454 -------------------CNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKV 494
                              CN+   + +  LL E     L  + S + ALI  +CK +  
Sbjct: 565 VKNRVELDIVTYNALILGLCNEGKMKKVEHLLRELDRAKLEPNASTFSALIVGWCKMQNS 624

Query: 495 DYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSF 554
           + A +L N+M+ +G   +   Y  +  ++ +  + +   D++ DM          + R  
Sbjct: 625 ERALQLLNVMKKSGFHPNYTTYKMVISSFCKNKDLEGAVDVMGDM----------LGRCI 674

Query: 555 SASYAKDNEILDLFW 569
           +   A  NE  D  W
Sbjct: 675 APDKALLNEFFDGLW 689



 Score = 82.0 bits (201), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 74/275 (26%), Positives = 111/275 (40%), Gaps = 46/275 (16%)

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMV-----WKVYKKMVQL 194
           + +L  T D  +V D+M    +       TV  N+L      D V      ++  KM Q 
Sbjct: 442 FCDLGRTADAAEVLDKMPEWGV----GRTTVSFNTLIAAYCRDGVDAGPALQLKMKMEQE 497

Query: 195 GVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEA 254
           G+V ++  Y+ +IH  CK   + K  ++L EM  K V  +  TYNTLI  Y   G +  A
Sbjct: 498 GLVPDVVTYDTIIHGLCKEGRMGKANQVLSEMRVKGVMPNTVTYNTLIHGYVALGDNAMA 557

Query: 255 LAVQDRMEREGISPDIVTYNSLI-----------------------------------HG 279
             V + M +  +  DIVTYN+LI                                    G
Sbjct: 558 GRVHEEMVKNRVELDIVTYNALILGLCNEGKMKKVEHLLRELDRAKLEPNASTFSALIVG 617

Query: 280 FCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPG 337
           +C+      A +L   +K  G  PN+ TY  +I  +C+  DLE A+ +   M  + + P 
Sbjct: 618 WCKMQNSERALQLLNVMKKSGFHPNYTTYKMVISSFCKNKDLEGAVDVMGDMLGRCIAPD 677

Query: 338 VVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPD 372
               N     L K  ++  A  L +  N  K  PD
Sbjct: 678 KALLNEFFDGLWKAKKLHLAENLRSLNNGLKFIPD 712


>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 925

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 123/411 (29%), Positives = 198/411 (48%), Gaps = 9/411 (2%)

Query: 134 SWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQ 193
           + L+I    L MT   +  + Q+    L P+L     ++N+L KD        +  K+ +
Sbjct: 197 TTLLIQLNKLNMTSTVMDRYHQILREGLQPNLLIYNSVINALCKDGNVRDAESIINKVFK 256

Query: 194 LGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYE 253
            G+  +   Y  +I   C++ D+D   ++   M+ +    +  TY+TLI   C  G   E
Sbjct: 257 SGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNE 316

Query: 254 ALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLID 311
           AL     M R G+ P + T+ + I   C  GR+ +A ++F D+  KG  PN  TYT+LI 
Sbjct: 317 ALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLIS 376

Query: 312 GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAP 371
           G  R + +  A+ L   M+  GV P  VTYN+++  L +   I  A  + N M +    P
Sbjct: 377 GQ-RVSRM--AIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLP 433

Query: 372 DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
           +  + N LI  YC IGDT  AM +   ML+        TY  +I G+C + + D+A  +L
Sbjct: 434 NTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVL 493

Query: 432 FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
             M   G  P   SY+ L+ G+C  +  E    + +E + RGLC +   Y ALI  +CK 
Sbjct: 494 ELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKD 553

Query: 492 EKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWR----AGEPKACSDILDD 538
           EK+D A R+   M+ +G   +   Y  L +   +    +G  + C  +L++
Sbjct: 554 EKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEE 604



 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 119/475 (25%), Positives = 217/475 (45%), Gaps = 42/475 (8%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           S++N + K    PD  +   + +++ Y   +      ++F++M      P+    + L+N
Sbjct: 249 SIINKVFKSGMKPD--TFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLIN 306

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
            L      +       +M + GV+  +H +   I A C    ++   K+  +M+ K  + 
Sbjct: 307 GLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKP 366

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSL----------------- 276
           +++TY +LI+    + +   A+ +  RM R+G+ P+ VTYN+L                 
Sbjct: 367 NVYTYTSLIS---GQRVSRMAIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVF 423

Query: 277 ------------------IHGFCREGRMREARRLFRD-IKG-ATPNHVTYTTLIDGYCRA 316
                             I G+C  G   +A  +  + +KG  TP  VTY  +I GYC +
Sbjct: 424 NMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDS 483

Query: 317 NDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTC 376
            D + A+R+ E+M A G  P   +Y  ++   CK  ++  A+ + NEM ++ + P+ VT 
Sbjct: 484 GDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTY 543

Query: 377 NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD 436
             LI+ YCK      A ++  RM  +G   +  TY  LIHG  K      A+EL   ML+
Sbjct: 544 TALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLE 603

Query: 437 AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDY 496
              SP   +YS +++G CN       L++ ++ V  G   ++  Y +LI+   ++ +V+ 
Sbjct: 604 EKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEE 663

Query: 497 AQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIY 551
           A+ +F+ ++  G++ D V Y  +      +G+     D L +M       TL+ Y
Sbjct: 664 AEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTY 718



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 102/345 (29%), Positives = 165/345 (47%), Gaps = 2/345 (0%)

Query: 144 KMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLY 203
           ++++  + +F +M    ++P+      L+N L ++   D    V+  M + G + N   Y
Sbjct: 379 RVSRMAIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSY 438

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER 263
           N LI   C   D +K   +L  M        L TYN +I  YC  G    A+ V + M+ 
Sbjct: 439 NELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKA 498

Query: 264 EGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEE 321
            G  PD  +Y  LI GFC+  +M  A  +F ++  +G  PN VTYT LI GYC+   L+ 
Sbjct: 499 NGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDC 558

Query: 322 ALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
           A R+ E M   G  P V TYN ++  L K+     A  L   M E+KI+PD VT +T+IN
Sbjct: 559 AARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVIN 618

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
             C  G    A+++ N+M++ G + +  TY +LI    +   ++ A+E+   +   G  P
Sbjct: 619 GLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIP 678

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
              +Y  +++        +     L E ++ G    +  Y  LI+
Sbjct: 679 DEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIK 723



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 102/401 (25%), Positives = 176/401 (43%), Gaps = 38/401 (9%)

Query: 198 ANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAV 257
           A IH+    I +C   +++ +    L     +  +  LFTY TL+    K  M    +  
Sbjct: 160 ARIHM----IKSCSNKAEMTQALNYLDMFSQRGPKMGLFTYTTLLIQLNKLNMTSTVMDR 215

Query: 258 QDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCR 315
             ++ REG+ P+++ YNS+I+  C++G +R+A  +   +   G  P+  TYT++I GYCR
Sbjct: 216 YHQILREGLQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCR 275

Query: 316 ANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVT 375
             DL+ A  +   M  +G  P   TY++++  LC  GR+ +A   ++EM    + P   T
Sbjct: 276 NRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHT 335

Query: 376 CNTLINAYCKIGDTASAMKV--------------------------------KNRMLEAG 403
               I A C +G    A K+                                 +RM   G
Sbjct: 336 FTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISGQRVSRMAIGLFHRMSRDG 395

Query: 404 LMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALL 463
           ++ +  TY AL++   +  E+D A  +   M   G  P+  SY+ L+ GYC   + E  +
Sbjct: 396 VVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAM 455

Query: 464 KLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAY 523
            +L   +       +  Y  +I+ +C     D A R+  LM+ NG   D   YT L   +
Sbjct: 456 SMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGF 515

Query: 524 WRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
            +  + +  S + ++M  R L      Y +  + Y KD ++
Sbjct: 516 CKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKL 556



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 90/380 (23%), Positives = 163/380 (42%), Gaps = 24/380 (6%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           +F++M    L P+    T L++   KD   D   ++ ++M + G   N+  YNVLIH   
Sbjct: 527 MFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLT 586

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           K ++    E+L   M  + +  D+ TY+T+I   C  G    AL + ++M + G  P++ 
Sbjct: 587 KQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLH 646

Query: 272 TYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           TY+SLI    +EGR+ EA  +F ++K  G  P+ VTY  +I+    +  ++ A      M
Sbjct: 647 TYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEM 706

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLN-----EMNEKKIAPDNVTC-------- 376
              G  P + TY+ +++ L  E        L N       +++ I  D ++         
Sbjct: 707 INAGCQPTLQTYDVLIKGLQNEMVYHKLVALPNAASTSTFDDQIINKDVISVLSSKLAEL 766

Query: 377 ---------NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIA 427
                    + L++   + G    A  +   M+      +Q TYK  +    +A ++D+A
Sbjct: 767 DFELSRQLYDALLSRLSRSGRWFEANNLYRSMVSQSQCPNQDTYKHFLISLLRALKVDLA 826

Query: 428 KELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRR 487
            ++   M D         Y  L+   C  +  +    + ++ +SR L  D  V+  LI  
Sbjct: 827 MDVFKHMSDQRCELHLTGYKELICTLCQLHRRKEARFVFEKMLSRALNADEIVWTILING 886

Query: 488 FCKKEKVDYAQRLFNLMQGN 507
                  D      ++M+ N
Sbjct: 887 LLGAGYKDLCMEFLHIMETN 906



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 83/395 (21%), Positives = 157/395 (39%), Gaps = 40/395 (10%)

Query: 54  CHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQN----MLEKIALRDF 109
           C    L CA            + ++Q++  +IH LTK  +F  A+     MLE+    D 
Sbjct: 551 CKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDV 610

Query: 110 LSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACT 169
           ++  +V+N L         N+  +                L++F++M  H  +P+LH  +
Sbjct: 611 VTYSTVINGLC--------NNGAIPL-------------ALEMFNKMVKHGCLPNLHTYS 649

Query: 170 VLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFK 229
            L+ +L ++   +   +++ ++ + G++ +   Y  +I  C  S  VD+    L EM   
Sbjct: 650 SLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINA 709

Query: 230 DVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYN--SLIHGFCREGRMR 287
             +  L TY+ LI     + ++++ +A+ +          I+  +  S++     E    
Sbjct: 710 GCQPTLQTYDVLIKGLQNEMVYHKLVALPNAASTSTFDDQIINKDVISVLSSKLAELDFE 769

Query: 288 EARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRK 347
            +R+L             Y  L+    R+    EA  L   M ++   P   TY   L  
Sbjct: 770 LSRQL-------------YDALLSRLSRSGRWFEANNLYRSMVSQSQCPNQDTYKHFLIS 816

Query: 348 LCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLD 407
           L +  ++  A  +   M++++          LI   C++     A  V  +ML   L  D
Sbjct: 817 LLRALKVDLAMDVFKHMSDQRCELHLTGYKELICTLCQLHRRKEARFVFEKMLSRALNAD 876

Query: 408 QFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +  +  LI+G   A   D+  E L  M     +PS
Sbjct: 877 EIVWTILINGLLGAGYKDLCMEFLHIMETNRRNPS 911



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/194 (20%), Positives = 82/194 (42%)

Query: 375 TCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGM 434
           T  TL+    K+  T++ M   +++L  GL  +   Y ++I+  CK   +  A+ ++  +
Sbjct: 195 TYTTLLIQLNKLNMTSTVMDRYHQILREGLQPNLLIYNSVINALCKDGNVRDAESIINKV 254

Query: 435 LDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKV 494
             +G  P   +Y+ ++ GYC   + ++  ++ +     G   + + Y  LI   C   +V
Sbjct: 255 FKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRV 314

Query: 495 DYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSF 554
           + A    + M  +G+L     +T+   A    G  +    I  DM ++     +  Y S 
Sbjct: 315 NEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSL 374

Query: 555 SASYAKDNEILDLF 568
            +        + LF
Sbjct: 375 ISGQRVSRMAIGLF 388


>gi|297738031|emb|CBI27232.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 128/438 (29%), Positives = 212/438 (48%), Gaps = 20/438 (4%)

Query: 129 NSHVLSWLVIFYA--NLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWK 186
           + +VLS+ ++  A   L +    ++VF +M +    P +     L++ L K+   D    
Sbjct: 185 SPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVL 244

Query: 187 VYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYC 246
           +  +M   G   +   +NVLI+  CK  D+ +V KL+  M  K    +  TYNT+I   C
Sbjct: 245 LLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLC 304

Query: 247 KKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHV 304
            KG   +A+++ DRM      P+ VTY +LI+G  ++GR  +   L   +  +G   N  
Sbjct: 305 LKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEY 364

Query: 305 TYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM 364
            Y+TLI G  +    EEA+ L + M  KG  P +V Y++++  LC+EG++ +A  +L EM
Sbjct: 365 AYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEM 424

Query: 365 NEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEM 424
             K   P+  T ++LI  + K G++  A++V   M +   + ++  Y  LIHG C+  ++
Sbjct: 425 VNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKL 484

Query: 425 DIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLC------VDV 478
             A  +   ML  G  P   +YS ++ G CN  + E  LKL +E     LC       DV
Sbjct: 485 REAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEM----LCQESDSQPDV 540

Query: 479 SVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAY-WRAGEPKACSDILD 537
             Y  L+R  CK+  + +A  L N M   G   D +       A   +   P+   + LD
Sbjct: 541 VTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLNPPQDGREFLD 600

Query: 538 DMY-----RRRLMITLKI 550
           ++      R+R++   KI
Sbjct: 601 ELVVRLHKRQRIVGAAKI 618



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 113/373 (30%), Positives = 191/373 (51%), Gaps = 4/373 (1%)

Query: 171 LLNSLAKDRLTDMVWKVYKKMV--QLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEF 228
           +LN + ++ L     + Y+  V  +  +  N+  +N++I A CK   VD+  ++  EM  
Sbjct: 157 VLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAI 216

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
           +    D+FTY TL+   CK+    EA+ + D M+ EG  P  VT+N LI+G C++G M  
Sbjct: 217 QKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVR 276

Query: 289 ARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILR 346
             +L  +  +KG  PN VTY T+I+G C    L++A+ L + M A    P  VTY +++ 
Sbjct: 277 VTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLIN 336

Query: 347 KLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLML 406
            L K+GR  D   LL+ + E+    +    +TLI+   K   +  AM +  +M+E G   
Sbjct: 337 GLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQP 396

Query: 407 DQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLL 466
           +   Y ALI G C+  ++D AKE+L  M++ G +P+  +YS L+ G+    N +  +++ 
Sbjct: 397 NIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVW 456

Query: 467 DEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRA 526
            E        +   Y  LI   C+  K+  A  ++  M G G+  D V Y+S+ +    A
Sbjct: 457 KEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNA 516

Query: 527 GEPKACSDILDDM 539
           G  +    + ++M
Sbjct: 517 GSVEVGLKLFNEM 529



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 86/350 (24%), Positives = 159/350 (45%), Gaps = 43/350 (12%)

Query: 270 IVTYNSLIHGFCREGRMREARRLFR-DIKGAT---PNHVTYTTLIDGYCRANDLEEALRL 325
           + ++NS+++   +EG    A   +   + G T   PN +++  +I   C+   ++ A+ +
Sbjct: 151 VRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEV 210

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
              MA +   P V TY +++  LCKE RI +A  LL+EM  +   P +VT N LIN  CK
Sbjct: 211 FREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCK 270

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            GD     K+ + M   G + ++ TY  +I+G C   ++D A  LL  M+ +   P+  +
Sbjct: 271 KGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVT 330

Query: 446 YSWLVDG------------------------------------YCNKNNEEALLKLLDEF 469
           Y  L++G                                    +  + +EEA + L  + 
Sbjct: 331 YGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEA-MGLWKKM 389

Query: 470 VSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEP 529
           V +G   ++ VY ALI   C++ K+D A+ +   M   G   ++  Y+SL   +++ G  
Sbjct: 390 VEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNS 449

Query: 530 KACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD--LFWSHVVDRGL 577
           +    +  +M +   +     Y        +D ++ +  + W+H++ RGL
Sbjct: 450 QKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGL 499



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 73/298 (24%), Positives = 127/298 (42%), Gaps = 60/298 (20%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           DG+ +   +       + +A + L++ L K+  ++    ++KKMV+ G   NI +Y+ LI
Sbjct: 346 DGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALI 405

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY---------------------- 245
              C+   +D+ +++LCEM  K    + FTY++LI  +                      
Sbjct: 406 DGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCV 465

Query: 246 -------------CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRL 292
                        C+ G   EA+ +   M   G+ PD+V Y+S+IHG C  G +    +L
Sbjct: 466 PNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKL 525

Query: 293 FRDI----KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILR-- 346
           F ++      + P+ VTY  L+   C+ N +  A+ L   M  +G  P ++T N  L   
Sbjct: 526 FNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNAL 585

Query: 347 -------------------KLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
                              +L K  RI  A +++  M +K + P+  T   +I   CK
Sbjct: 586 REKLNPPQDGREFLDELVVRLHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELCK 643


>gi|449462477|ref|XP_004148967.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 597

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 130/457 (28%), Positives = 213/457 (46%), Gaps = 38/457 (8%)

Query: 72  PNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSH 131
           PN   SL +H   I   + N HF SA      +  +    +P   N  +           
Sbjct: 17  PNLSSSLFTHSPTIP--SSNPHFSSA------VHHKSLNVSPQNFNTPISFQQQ------ 62

Query: 132 VLSWLVIFYANLKMTQ----DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKV 187
               L +F  N K          Q F  M   N  P L + T LL+ LAK +    V+ +
Sbjct: 63  ----LSMFLHNCKTGNITAIQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYL 118

Query: 188 YKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCK 247
           Y +M   G+  +    N+L++  C  + V +   ++  +  +    D+ TY TLI   C 
Sbjct: 119 YNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCM 178

Query: 248 KGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGAT------- 300
           +    +A  +  RM++ G +P+ +TY +L+ G CR G +  A +L +++   +       
Sbjct: 179 EHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINF 238

Query: 301 -PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
            P  ++Y+ +ID  C+    +EA  L E M  +G+ P V++Y S++ +        +A R
Sbjct: 239 KPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLMWE--------EAKR 290

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
           L NEM  + + P+ VT N LI+  CK G    A  +   M++ G++ +  TY +LI GFC
Sbjct: 291 LFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFC 350

Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
              +++ A+EL   M   G  P    Y+ L++GYC  +  E  +KL +  +  G   DV 
Sbjct: 351 LVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVK 410

Query: 480 VYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIY 516
            Y AL+    +  KV  A++LF +M+  GI GD  IY
Sbjct: 411 TYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIY 447



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 111/395 (28%), Positives = 187/395 (47%), Gaps = 45/395 (11%)

Query: 160 NLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKV 219
           N  P + + ++++++L KDR  D    ++++M   G+   +  Y  L+         ++ 
Sbjct: 237 NFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLMW--------EEA 288

Query: 220 EKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHG 279
           ++L  EM  + V+ ++ T+N LI + CK+G   EA  + + M + GI P+++TYNSLI G
Sbjct: 289 KRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEG 348

Query: 280 FCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPG 337
           FC  G +  AR LF  +  KG  P+ + YT LI+GYC+ + +EEA++L   M   G  P 
Sbjct: 349 FCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPD 408

Query: 338 VVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKN 397
           V TY ++L  L + G++ DA +L   M    I  D       +N  CK G    AM++ N
Sbjct: 409 VKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFN 468

Query: 398 RMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKN 457
           ++    + LD   +  LI G CKA +++ A EL   +      P                
Sbjct: 469 KLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQP---------------- 512

Query: 458 NEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYT 517
                              DV  Y  +I  FC+  +V  A  LF  M+ NG   D + Y 
Sbjct: 513 -------------------DVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYA 553

Query: 518 SLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYR 552
           +L   ++ + + +   ++L  M +R + + + I R
Sbjct: 554 TLIRGFFESKKLEKVVELLHMMVQRDVSLDVNILR 588



 Score = 92.0 bits (227), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 68/266 (25%), Positives = 111/266 (41%), Gaps = 14/266 (5%)

Query: 299 ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDAN 358
            TP   ++T L+ G  +     +   L   M   G+ P   T N +L  LC   R+ +  
Sbjct: 92  PTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGL 151

Query: 359 RLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGF 418
            ++  +  +   PD VT  TLI   C     + A  +  RM + G   +  TY  L+ G 
Sbjct: 152 AVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGL 211

Query: 419 CKAKEMDIAKELLFGMLD------AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSR 472
           C+   + IA +L   ML+        F P   SYS ++D  C    E+    L +E   +
Sbjct: 212 CRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQ 271

Query: 473 GLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKAC 532
           G+   V  Y +L+         + A+RLFN M   G+  + V +  L     + G+    
Sbjct: 272 GMTPTVISYTSLMW--------EEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEA 323

Query: 533 SDILDDMYRRRLMITLKIYRSFSASY 558
            D+L+ M +R ++  L  Y S    +
Sbjct: 324 KDLLEVMIQRGIVPNLLTYNSLIEGF 349



 Score = 78.6 bits (192), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 56/216 (25%), Positives = 89/216 (41%), Gaps = 8/216 (3%)

Query: 314 CRANDLE--EALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAP 371
           C+  ++   +A +   +M      P + ++  +L  L K         L N+M    I+P
Sbjct: 70  CKTGNITAIQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISP 129

Query: 372 DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
           D  T N L+N  C +      + V   +L  G + D  TY  LI G C    +  A  L 
Sbjct: 130 DCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLF 189

Query: 432 FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSV------YRALI 485
             M   G +P+  +Y  L+ G C   N    LKL  E ++      ++       Y  +I
Sbjct: 190 TRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIII 249

Query: 486 RRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAY 521
              CK  + D A+ LF  M+  G+    + YTSL +
Sbjct: 250 DALCKDRREDEARDLFEEMKVQGMTPTVISYTSLMW 285


>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
 gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
          Length = 797

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 123/445 (27%), Positives = 207/445 (46%), Gaps = 7/445 (1%)

Query: 116 LNALVKIHDDPDGNSHVLSW--LVIFYANLKMTQDGLQVFDQM---RVHNLMPHLHACTV 170
           ++ LVK   +      V+S+  L+  + N K  ++ L++   M   +  +  P++ +  +
Sbjct: 149 MDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAI 208

Query: 171 LLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKD 230
           ++N    +   D  + ++ +M+  G+  N+  Y  +I   CK+  VD+ E +  +M  K 
Sbjct: 209 VINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKG 268

Query: 231 VRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREAR 290
           V+ D  TYN LI  Y   G   E + + + M   G+ PD  TY SL++  C  GR REAR
Sbjct: 269 VKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREAR 328

Query: 291 RLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
            LF  +  KG  PN   Y  LI GY     L E   L  +M   G+ P    +N I    
Sbjct: 329 FLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAY 388

Query: 349 CKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ 408
            K+  I +A  + N+M ++ ++PD V    LI+A CK+G    A+   N+M+  G+  + 
Sbjct: 389 AKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNI 448

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
           F + +L++G C   + + AKE  F ML+ G  P    ++ ++   C K       +L+D 
Sbjct: 449 FVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDL 508

Query: 469 FVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
               G    V  Y  LI   C   ++D A +  ++M   G+  D   Y +L + Y RAG 
Sbjct: 509 MERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGR 568

Query: 529 PKACSDILDDMYRRRLMITLKIYRS 553
                 +  +M R  +   +  Y +
Sbjct: 569 IDDAYGVFREMLRNGITPGVVTYST 593



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 105/379 (27%), Positives = 189/379 (49%), Gaps = 4/379 (1%)

Query: 126 PDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVW 185
           PD +++  + L+  Y ++   ++ +++ ++M  H L P  +    LLN L  +       
Sbjct: 271 PDNDTY--NCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREAR 328

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
            ++  M++ G+  N+ +Y +LIH       + ++  LL  M    +  D   +N +   Y
Sbjct: 329 FLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAY 388

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNH 303
            KK M  EA+ + ++M+++G+SPD+V Y +LI   C+ GR+ +A   F  +  +G  PN 
Sbjct: 389 AKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNI 448

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
             + +L+ G C  +  E+A      M  +G+ P VV +N+IL  LC +G++  A RL++ 
Sbjct: 449 FVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDL 508

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
           M      P  ++  TLI  +C +G    A K  + ML  GL  D++TY  L+HG+C+A  
Sbjct: 509 MERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGR 568

Query: 424 MDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRA 483
           +D A  +   ML  G +P   +YS ++ G           +L    ++ G   ++ +Y  
Sbjct: 569 IDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNI 628

Query: 484 LIRRFCKKEKVDYAQRLFN 502
           ++    K   VD A +LF 
Sbjct: 629 ILNGLSKNNCVDEAFKLFQ 647



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 123/477 (25%), Positives = 215/477 (45%), Gaps = 12/477 (2%)

Query: 106 LRDFLSTPSVLNALVKIH--DDPDGNS---HVLSWLVIFYANLKMTQ--DGLQVFDQMRV 158
           L+ F +      AL  +H   D  G S   +V+S+ ++        Q      +F +M  
Sbjct: 172 LKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVINGFFTEGQVDKAYNLFLEMMD 231

Query: 159 HNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDK 218
             + P++   T +++ L K ++ D    V+++M+  GV  +   YN LIH         +
Sbjct: 232 RGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKE 291

Query: 219 VEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIH 278
           V ++L EM    ++ D +TY +L+   C  G   EA  + D M R+GI P++  Y  LIH
Sbjct: 292 VVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIH 351

Query: 279 GFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYP 336
           G+  +G + E   L   +   G +P+H  +  +   Y +   ++EA+ +   M  +G+ P
Sbjct: 352 GYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSP 411

Query: 337 GVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVK 396
            VV Y +++  LCK GR+ DA    N+M  + +AP+    N+L+   C +     A +  
Sbjct: 412 DVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFY 471

Query: 397 NRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNK 456
             ML  G+  D   +  ++   C   ++  A+ L+  M   G  P   SY+ L+ G+C  
Sbjct: 472 FEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLV 531

Query: 457 NNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIY 516
              +   K LD  +S GL  D   Y  L+  +C+  ++D A  +F  M  NGI    V Y
Sbjct: 532 GRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTY 591

Query: 517 TSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDN---EILDLFWS 570
           +++ +  +         ++  +M        + IY       +K+N   E   LF S
Sbjct: 592 STILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQS 648



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 109/396 (27%), Positives = 185/396 (46%), Gaps = 16/396 (4%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAK-------DRLTDMVWKVYKKMVQ---LGVV 197
           D L++FD +  H     + A   LL ++++          +++V  ++ +M++   + V 
Sbjct: 32  DALKLFDGLLTHARPASVIAFNHLLTAVSRVSGRRSSTTESELVVSLFNRMIRECTIKVT 91

Query: 198 ANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAV 257
            +   Y++LI   C+   ++        +     R +    N L+   C      EA+ +
Sbjct: 92  PDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEAMDI 151

Query: 258 -QDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR---DIKGAT--PNHVTYTTLID 311
              RM   G +PD+V+YN+L+ GFC E R  EA  L     D +G +  PN V+Y  +I+
Sbjct: 152 LVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVIN 211

Query: 312 GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAP 371
           G+     +++A  L   M  +G+ P VVTY +++  LCK   +  A  +  +M +K + P
Sbjct: 212 GFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKP 271

Query: 372 DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
           DN T N LI+ Y  IG     +++   M   GL  D +TY +L++  C       A+ L 
Sbjct: 272 DNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLF 331

Query: 432 FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
             M+  G  P+   Y  L+ GY  K     +  LL+  V  GL  D  ++  +   + KK
Sbjct: 332 DSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKK 391

Query: 492 EKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
             +D A  +FN M+  G+  D V Y +L  A  + G
Sbjct: 392 AMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLG 427



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 100/331 (30%), Positives = 166/331 (50%), Gaps = 5/331 (1%)

Query: 197 VANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALA 256
           V NI +  +L   C      + ++ L+  M       D+ +YNTL+  +C +    EAL 
Sbjct: 127 VNNIVINQLLKGLCDAKRLCEAMDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALE 186

Query: 257 VQDRM-EREGIS--PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLID 311
           +   M + +G S  P++V+Y  +I+GF  EG++ +A  LF ++  +G  PN VTYTT+ID
Sbjct: 187 LLHMMADSQGRSCPPNVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVID 246

Query: 312 GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAP 371
           G C+A  ++ A  + + M  KGV P   TYN ++      G+ ++  R+L EM+   + P
Sbjct: 247 GLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKP 306

Query: 372 DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
           D  T  +L+N  C  G    A  + + M+  G+  +   Y  LIHG+     +    +LL
Sbjct: 307 DCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLL 366

Query: 432 FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
             M++ G SP +  ++ +   Y  K   +  + + ++   +GL  DV  Y ALI   CK 
Sbjct: 367 NLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKL 426

Query: 492 EKVDYAQRLFNLMQGNGILGDSVIYTSLAYA 522
            +VD A   FN M   G+  +  ++ SL Y 
Sbjct: 427 GRVDDAVLKFNQMMNEGVAPNIFVFNSLVYG 457



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 99/402 (24%), Positives = 183/402 (45%), Gaps = 2/402 (0%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N  +   L+  YA      +   + + M  + L P  H   ++  + AK  + D    ++
Sbjct: 342 NVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIF 401

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
            KM Q G+  ++  Y  LI A CK   VD       +M  + V  ++F +N+L+   C  
Sbjct: 402 NKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTV 461

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTY 306
               +A      M  +GI PD+V +N+++   C +G++ +A+RL   ++  G  P  ++Y
Sbjct: 462 DKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISY 521

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
           TTLI G+C    ++EA +  +VM + G+ P   TYN++L   C+ GRI DA  +  EM  
Sbjct: 522 TTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLR 581

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
             I P  VT +T+++        + A ++   M+ +G   + + Y  +++G  K   +D 
Sbjct: 582 NGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDE 641

Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
           A +L   +    F     +++ ++         E  + L     S GL  DV  Y  +  
Sbjct: 642 AFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAE 701

Query: 487 RFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
              ++  ++    LF+ M+ +G   +S +  +L       G+
Sbjct: 702 NLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGD 743



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 70/284 (24%), Positives = 119/284 (41%), Gaps = 38/284 (13%)

Query: 169 TVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEF 228
           T+L N   K ++     ++   M ++G    +  Y  LI   C    +D+  K L  M  
Sbjct: 488 TILCNLCTKGQVMK-AQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLS 546

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
             ++ D +TYNTL+  YC+ G   +A  V   M R GI+P +VTY++++HG     R  E
Sbjct: 547 VGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSE 606

Query: 289 ARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAK-------------- 332
           A+ L+ ++   G   N   Y  +++G  + N ++EA +L + + +K              
Sbjct: 607 AKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIG 666

Query: 333 ---------------------GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAP 371
                                G+ P V TY  I   L +EG + + + L + M +    P
Sbjct: 667 ALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTP 726

Query: 372 DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALI 415
           ++   N L+      GD   A     ++ E    L+  T   LI
Sbjct: 727 NSRMLNALVRRLLHRGDITRAGAYLCKLDEKNFSLEASTTAMLI 770



 Score = 65.9 bits (159), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 52/231 (22%), Positives = 96/231 (41%), Gaps = 2/231 (0%)

Query: 153 FDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCK 212
            D M    L P       LL+   +    D  + V+++M++ G+   +  Y+ ++H    
Sbjct: 541 LDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFT 600

Query: 213 SSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVT 272
           +    + ++L   M     + +++ YN ++    K     EA  +   +  +    +I T
Sbjct: 601 TRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITT 660

Query: 273 YNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMA 330
           +N +I    + GR  +A  LF  I   G  P+  TY  + +       LEE   L   M 
Sbjct: 661 FNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAME 720

Query: 331 AKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
             G  P     N+++R+L   G I  A   L +++EK  + +  T   LI+
Sbjct: 721 KSGTTPNSRMLNALVRRLLHRGDITRAGAYLCKLDEKNFSLEASTTAMLIS 771


>gi|125540047|gb|EAY86442.1| hypothetical protein OsI_07823 [Oryza sativa Indica Group]
          Length = 703

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 114/352 (32%), Positives = 172/352 (48%), Gaps = 2/352 (0%)

Query: 203 YNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRME 262
           YN +I + C+ +D+    + L  M     R D +T+N+LI  YC+      A  + D+M 
Sbjct: 14  YNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMP 73

Query: 263 REGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEA 322
             G + D+V+Y +LI GFC  GR+ EA  LF ++    P+   Y  L+ G C+A   EE 
Sbjct: 74  LRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMD--QPDMHMYAALVKGLCKAGRGEEG 131

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
           L +   M   G  P    Y +++   C E + ++A  +L EM EK +AP  VTC  +INA
Sbjct: 132 LLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAVINA 191

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           YCK G  + A++V   M   G   + +TY AL+ GFC   ++  A  LL  M   G +P 
Sbjct: 192 YCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVNPD 251

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ L+ G C   + E+  +LL      GL  D   Y ALI   CK  + D A  LF+
Sbjct: 252 AVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFD 311

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSF 554
            ++  GI  ++V + SL     ++G+       L+ M           Y SF
Sbjct: 312 SLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSF 363



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 114/394 (28%), Positives = 187/394 (47%), Gaps = 6/394 (1%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           + +++F +M      P +H    L+  L K    +    + ++M +LG   +   Y  ++
Sbjct: 99  EAVELFGEMD----QPDMHMYAALVKGLCKAGRGEEGLLMLRRMKELGWRPSTRAYAAVV 154

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
              C      + E++L EM  K +   + T   +I  YCK+G   +AL V + M+  G  
Sbjct: 155 DFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCK 214

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRL 325
           P++ TYN+L+ GFC EG++ +A  L   ++  G  P+ VTY  LI G C    +E A RL
Sbjct: 215 PNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRL 274

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
             +M   G+     TYN+++  LCK+GR   A  L + +  + I P+ VT N+LIN  CK
Sbjct: 275 LRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCK 334

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            G    A K   +M+ AG   D +TY + I   CK K        +  ML     PS  +
Sbjct: 335 SGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVN 394

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+ ++     + N   + +   E VS G   DV  Y   +R +C + +++ A+ +   M 
Sbjct: 395 YTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMS 454

Query: 506 GNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
            NG+  D++ Y +L   +   G+      IL  M
Sbjct: 455 KNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQM 488



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 116/454 (25%), Positives = 206/454 (45%), Gaps = 8/454 (1%)

Query: 108 DFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHA 167
           D  S    L+ +V+    PD  ++  + L++ Y           +FD+M +      + +
Sbjct: 26  DLASALRYLSLMVRSGWRPD--AYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVS 83

Query: 168 CTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEME 227
              L+    +    D   +++ +M Q     ++H+Y  L+   CK+   ++   +L  M+
Sbjct: 84  YAALIEGFCETGRIDEAVELFGEMDQ----PDMHMYAALVKGLCKAGRGEEGLLMLRRMK 139

Query: 228 FKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMR 287
               R     Y  ++   C +    EA  +   M  +G++P +VT  ++I+ +C+EGRM 
Sbjct: 140 ELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMS 199

Query: 288 EARRLFR--DIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSIL 345
           +A R+     ++G  PN  TY  L+ G+C    + +A+ L   M   GV P  VTYN ++
Sbjct: 200 DALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLI 259

Query: 346 RKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLM 405
           R  C +G I  A RLL  M    +  D  T N LINA CK G T  A  + + +   G+ 
Sbjct: 260 RGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIK 319

Query: 406 LDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKL 465
            +  T+ +LI+G CK+ ++DIA + L  M+ AG +P   +YS  ++  C     +  L  
Sbjct: 320 PNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSF 379

Query: 466 LDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWR 525
           + E + + +      Y  +I +  K+       R +  M  +G   D V YT+   AY  
Sbjct: 380 IGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCI 439

Query: 526 AGEPKACSDILDDMYRRRLMITLKIYRSFSASYA 559
            G      ++L +M +  + +    Y +    +A
Sbjct: 440 EGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHA 473



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 109/443 (24%), Positives = 195/443 (44%), Gaps = 21/443 (4%)

Query: 144 KMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKD-RLTDMVWKVYKKMVQLGVVANIHL 202
           +  ++  ++  +M    L P +  CT ++N+  K+ R++D + +V + M   G   N+  
Sbjct: 161 RKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDAL-RVLELMKLRGCKPNVWT 219

Query: 203 YNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRME 262
           YN L+   C    V K   LL +M    V  D  TYN LI   C  G    A  +   ME
Sbjct: 220 YNALVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLME 279

Query: 263 REGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLE 320
            +G+  D  TYN+LI+  C++GR  +A  LF  +  +G  PN VT+ +LI+G C++  ++
Sbjct: 280 GDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVD 339

Query: 321 EALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLI 380
            A +  E M + G  P   TY+S +  LCK    ++    + EM +K + P  V    +I
Sbjct: 340 IAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVI 399

Query: 381 NAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFS 440
           +   K  +     +    M+ +G   D  TY   +  +C    ++ A+ +L  M   G +
Sbjct: 400 HKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVT 459

Query: 441 PSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQR- 499
               +Y+ L+DG+ +    +  + +L +  S     +   Y  L+R   +   V+     
Sbjct: 460 VDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPL 519

Query: 500 ----------------LFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRR 543
                           LF++M+ N  L +S  Y+S+   +   G  +  + ++  M    
Sbjct: 520 TPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDS 579

Query: 544 LMITLKIYRSFSASYAKDNEILD 566
           + +   IY +    + K    LD
Sbjct: 580 ISLNEDIYTALVTCFCKSKRYLD 602



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 109/488 (22%), Positives = 209/488 (42%), Gaps = 24/488 (4%)

Query: 97  AQNMLEKIALRDFLSTPSVLNALVKIH---DDPDGNSHVLSWLVIFYANLKMTQDGLQVF 153
           AQ+++   AL +       ++  V++    D PD   H+ + LV         ++GL + 
Sbjct: 78  AQDVVSYAALIEGFCETGRIDEAVELFGEMDQPD--MHMYAALVKGLCKAGRGEEGLLML 135

Query: 154 DQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKS 213
            +M+     P   A   +++    +R      ++ ++M + G+   +     +I+A CK 
Sbjct: 136 RRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKE 195

Query: 214 SDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTY 273
             +    ++L  M+ +  + +++TYN L+  +C +G  ++A+A+ ++M   G++PD VTY
Sbjct: 196 GRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTY 255

Query: 274 NSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAA 331
           N LI G C +G +  A RL R ++  G   +  TY  LI+  C+    ++A  L + +  
Sbjct: 256 NLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLET 315

Query: 332 KGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTAS 391
           +G+ P  VT+NS++  LCK G++  A + L +M      PD  T ++ I   CK+  +  
Sbjct: 316 RGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQE 375

Query: 392 AMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVD 451
            +     ML+  +      Y  +IH   K +   +       M+ +G +P   +Y+  + 
Sbjct: 376 GLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMR 435

Query: 452 GYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILG 511
            YC +        +L E    G+ VD   Y  L+       + D+A  +   M     + 
Sbjct: 436 AYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVP 495

Query: 512 DSVIYTSL-----------------AYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSF 554
           +   Y  L                     W+A E      + D M +   +     Y S 
Sbjct: 496 NQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSI 555

Query: 555 SASYAKDN 562
              +++D 
Sbjct: 556 LEGFSEDG 563



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 87/335 (25%), Positives = 141/335 (42%), Gaps = 42/335 (12%)

Query: 272 TYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           TYN++I   CR   +  A R    +   G  P+  T+ +LI GYCR N ++ A  L + M
Sbjct: 13  TYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 72

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
             +G    VV+Y +++   C+ GRI +A  L  EM++    PD      L+   CK G  
Sbjct: 73  PLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMDQ----PDMHMYAALVKGLCKAGRG 128

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP-------- 441
              + +  RM E G       Y A++   C  ++   A+E+L  M + G +P        
Sbjct: 129 EEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAV 188

Query: 442 --SYC-------------------------SYSWLVDGYCNKNNEEALLKLLDEFVSRGL 474
             +YC                         +Y+ LV G+CN+      + LL++    G+
Sbjct: 189 INAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGV 248

Query: 475 CVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSD 534
             D   Y  LIR  C    ++ A RL  LM+G+G++ D   Y +L  A  + G       
Sbjct: 249 NPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACS 308

Query: 535 ILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFW 569
           + D +  R +      + S      K  ++ D+ W
Sbjct: 309 LFDSLETRGIKPNAVTFNSLINGLCKSGKV-DIAW 342



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 82/345 (23%), Positives = 146/345 (42%), Gaps = 18/345 (5%)

Query: 116 LNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSL 175
           L  +V     PD  ++  S  +     +K +Q+GL    +M   ++ P     T++++ L
Sbjct: 345 LEKMVSAGCTPD--TYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKL 402

Query: 176 AKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADL 235
            K+R   +V + + +MV  G   ++  Y   + A C    +++ E +L EM    V  D 
Sbjct: 403 LKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDT 462

Query: 236 FTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD 295
             YNTL+  +   G    A+++  +M      P+  TY  L+    R        RL  D
Sbjct: 463 MAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVR-------MRLVED 515

Query: 296 IKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIR 355
           +   TP          G  +A +L +   L +VM      P   TY+SIL    ++GR  
Sbjct: 516 VLPLTPA---------GVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTE 566

Query: 356 DANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALI 415
           +A  L++ M E  I+ +      L+  +CK      A  +   M++ G +    +Y+ L+
Sbjct: 567 EATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPHLMSYQHLL 626

Query: 416 HGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEE 460
            G     + D AKE+        +SP    +  ++DG   K + +
Sbjct: 627 SGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSD 671



 Score = 43.9 bits (102), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 35/166 (21%), Positives = 69/166 (41%), Gaps = 2/166 (1%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D   +FD M+ +  +P+    + +L   ++D  T+    +   M +  +  N  +Y  L+
Sbjct: 532 DVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALV 591

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
              CKS        L+C M        L +Y  L++    +G   +A  +      +  S
Sbjct: 592 TCFCKSKRYLDAWVLVCSMIQHGFIPHLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYS 651

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLID 311
           PD + +  +I G  ++G    +R +   ++     P+H TY  L +
Sbjct: 652 PDEIVWKVIIDGLIKKGHSDISREMIIMLERMNCRPSHQTYAMLTE 697


>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
          Length = 479

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 116/406 (28%), Positives = 198/406 (48%), Gaps = 18/406 (4%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           + L +F QM      P++   T L+N L ++        +  +MV+ G+  N   Y  ++
Sbjct: 68  EALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIV 123

Query: 208 HACCKSSDVDKVEKLLCEME-FKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
              CK  D      LL +ME    ++ D+  Y+ +I    K G H +A  +   M+ +GI
Sbjct: 124 DGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGI 183

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEALR 324
            PDIVTY+ +I+GFC  G+  EA+RL ++  ++  +P+ VT++ LI+   +  DL  A  
Sbjct: 184 FPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQD 243

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEK-----------KIAPDN 373
           L + M + GV P VVT N++L  LC  G+++DA  +   M +             + PD 
Sbjct: 244 LLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDV 303

Query: 374 VTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFG 433
            T N LI+     G    A ++   M   G++ D  TY ++I+G CK   +D A ++   
Sbjct: 304 QTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDS 363

Query: 434 MLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEK 493
           M    FSP+  +++ L+ GYC     +  L+L  E   RG+  +   Y  LIR F K   
Sbjct: 364 MGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGN 423

Query: 494 VDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
           ++ +  +F  M  +G+  D++   ++    W   E K    +L+++
Sbjct: 424 INGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKKALAMLEEL 469



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 113/403 (28%), Positives = 196/403 (48%), Gaps = 21/403 (5%)

Query: 187 VYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYC 246
            + K+ +LG    +  +N L+H  C    V +   L  +M     + ++ T+ TL+   C
Sbjct: 37  TFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQM----CKPNVVTFTTLMNGLC 92

Query: 247 KKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGAT---PNH 303
           ++G   EA+A+ DRM  +G+ P+ +TY +++ G C+ G    A  L R ++  +   P+ 
Sbjct: 93  REGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDV 152

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
           V Y+ +IDG  +     +A  L   M  KG++P +VTY+ ++   C  G+  +A RLL E
Sbjct: 153 VIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQE 212

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
           M  +KI+PD VT + LINA  K GD  SA  +   M+ +G+  +  T   L+ G C + +
Sbjct: 213 MLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGK 272

Query: 424 MDIAKELLFGM------LDA-----GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSR 472
           +  A E+   M      +DA     G  P   +Y+ L+ G  N+       +L +E   R
Sbjct: 273 LKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHR 332

Query: 473 GLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKAC 532
           G+  D   Y ++I   CK+ ++D A ++F+ M       + V + +L   Y +AG     
Sbjct: 333 GIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDG 392

Query: 533 SDILDDMYRRRLMITLKIYRSFSASYAKDNEI---LDLFWSHV 572
            ++  +M RR ++     Y +    + K   I   LD+F   +
Sbjct: 393 LELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMI 435



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 115/411 (27%), Positives = 194/411 (47%), Gaps = 30/411 (7%)

Query: 194 LGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYE 253
           L +  +I+ +N+LI   C  S +        ++        L T+NTL+   C +    E
Sbjct: 9   LQIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSE 68

Query: 254 ALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLID 311
           AL +  +M +    P++VT+ +L++G CREGR+ EA  L   +   G  PN +TY T++D
Sbjct: 69  ALDLFHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVD 124

Query: 312 GYCRANDLEEALRL-REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIA 370
           G C+  D   AL L R++     + P VV Y++I+  L K+GR  DA  L  EM +K I 
Sbjct: 125 GMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIF 184

Query: 371 PDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL 430
           PD VT + +IN +C  G  + A ++   ML   +  D  T+  LI+   K  +++ A++L
Sbjct: 185 PDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDL 244

Query: 431 LFGMLDAGFSPSYCSYSWLVDGYCN-----------KNNEEALLKLLDEFVSRGLCVDVS 479
           L  M+ +G  P+  + + L+DG C+           K  +++++ +       G+  DV 
Sbjct: 245 LQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQ 304

Query: 480 VYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
            Y  LI     + K   A+ L+  M   GI+ D+V Y+S+     +       + + D M
Sbjct: 305 TYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSM 364

Query: 540 YRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKEMQLRN 590
             +     +  + +    Y K         + +VD GL    +F EM  R 
Sbjct: 365 GSKSFSPNIVTFNTLITGYCK---------AGMVDDGL---ELFCEMGRRG 403



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 106/445 (23%), Positives = 202/445 (45%), Gaps = 30/445 (6%)

Query: 54  CHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTP 113
           C    L  A   + +     +  +L +  T++H L        A ++  ++   + ++  
Sbjct: 26  CSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQMCKPNVVTFT 85

Query: 114 SVLNALVK--------------IHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMR-V 158
           +++N L +              + D    N      +V     +  T   L +  +M  +
Sbjct: 86  TLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEL 145

Query: 159 HNLMPHLHACTVLLNSLAKD-RLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVD 217
            ++ P +   + +++ L KD R TD    ++ +M   G+  +I  Y+ +I+  C S    
Sbjct: 146 SHIKPDVVIYSAIIDGLWKDGRHTD-AQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWS 204

Query: 218 KVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLI 277
           + ++LL EM  + +  D+ T++ LI    K+G    A  +   M   G+ P++VT N+L+
Sbjct: 205 EAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLL 264

Query: 278 HGFCREGRMREARRLFRDIK-------------GATPNHVTYTTLIDGYCRANDLEEALR 324
            G C  G++++A  +F+ ++             G  P+  TY  LI G        EA  
Sbjct: 265 DGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEE 324

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           L E M  +G+ P  VTY+S++  LCK+ R+ +A ++ + M  K  +P+ VT NTLI  YC
Sbjct: 325 LYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYC 384

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           K G     +++   M   G++ +  TY  LI GF K   ++ + ++   M+ +G  P   
Sbjct: 385 KAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTI 444

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEF 469
           +   ++ G  +K   +  L +L+E 
Sbjct: 445 TIRNMLTGLWSKEELKKALAMLEEL 469



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/154 (24%), Positives = 75/154 (48%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           +++++M    ++P     + ++N L K    D   +++  M       NI  +N LI   
Sbjct: 324 ELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGY 383

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           CK+  VD   +L CEM  + + A+  TY TLI  + K G    +L +   M   G+ PD 
Sbjct: 384 CKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDT 443

Query: 271 VTYNSLIHGFCREGRMREARRLFRDIKGATPNHV 304
           +T  +++ G   +  +++A  +  +++ +  +H+
Sbjct: 444 ITIRNMLTGLWSKEELKKALAMLEELQMSMDHHL 477


>gi|357447159|ref|XP_003593855.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355482903|gb|AES64106.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 790

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 127/494 (25%), Positives = 230/494 (46%), Gaps = 21/494 (4%)

Query: 63  FFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKI 122
           FF WA+     Y+H    ++TM+ IL+K +  + A+ +L  +  R    +P         
Sbjct: 183 FFYWADRQW-RYRHDAIVYYTMLDILSKTRLCQGARRILRLMTRRGIERSP--------- 232

Query: 123 HDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTD 182
                      S++++ Y+   M ++ L++   M+   + P L  C   +  L K    +
Sbjct: 233 --------EAFSYVMVSYSRAGMLRNALRILTLMQKAGVEPDLSICNTAIYVLVKGNKLE 284

Query: 183 MVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLI 242
              +  ++M   G+  +I  YN LI   C    +D   +L+ EM FK    D  +Y T++
Sbjct: 285 KALRFLERMKVAGIEPDIVSYNCLIKGYCDVHRIDDALELIAEMPFKGCPPDKVSYYTVM 344

Query: 243 ALYCKKGMHYEALAVQDRM-EREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGA 299
           A  CK     E   + + M +   + PD VTYN+LI+   + G   +A    R+   KG 
Sbjct: 345 AFLCKDRKVEEVKRLMENMVQNSNLIPDQVTYNTLIYALSKHGHADDALVFLREAEEKGF 404

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
             + V Y+ ++D +C+  ++++A  L   M +KG  P VVTY +I+   C+ G+I +A +
Sbjct: 405 HIDKVGYSAVVDSFCKNKNIDKAKSLVIDMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKK 464

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
           +L +M +    P+ VT   L+N  C  G +  A ++ N   E     +  TY A++HG  
Sbjct: 465 MLQQMYKHGCKPNTVTYTVLLNGLCHNGKSLEAREMINVSEEHWWTPNAITYSAVMHGLR 524

Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
           +  ++  A +L   M++ GF P+    + L+   C   N     K L+E + +G  V+V 
Sbjct: 525 REGKLSEACDLTREMIEKGFLPNPVDINLLIQSLCRNQNVVGAKKYLEECLHKGCAVNVV 584

Query: 480 VYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
            + ++I  FC+   +D A  +   M  +    D++ YT+L  A  +       S+++  M
Sbjct: 585 NFTSVIYGFCQIGDLDAALSMLEDMYLSNKHPDAITYTTLFDALGKKSRLDEASELIVKM 644

Query: 540 YRRRLMITLKIYRS 553
             + +  T   YR+
Sbjct: 645 LGKGIDPTPVTYRA 658



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/253 (22%), Positives = 107/253 (42%)

Query: 155 QMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSS 214
           +M     +P+     +L+ SL +++      K  ++ +  G   N+  +  +I+  C+  
Sbjct: 538 EMIEKGFLPNPVDINLLIQSLCRNQNVVGAKKYLEECLHKGCAVNVVNFTSVIYGFCQIG 597

Query: 215 DVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYN 274
           D+D    +L +M   +   D  TY TL     KK    EA  +  +M  +GI P  VTY 
Sbjct: 598 DLDAALSMLEDMYLSNKHPDAITYTTLFDALGKKSRLDEASELIVKMLGKGIDPTPVTYR 657

Query: 275 SLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGV 334
           ++IH FC+ GR+ +  +L   +    P    Y  +I+  C   + EEA +L   +     
Sbjct: 658 AVIHRFCQWGRVDDMMKLLEKMIARQPFKTVYNQVIEKLCYFGNREEAEKLLGKVLRTAS 717

Query: 335 YPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMK 394
                T + ++     +G    A ++  +M  + + PD   C  +       G  A A  
Sbjct: 718 KLDAKTCHILIESYLIDGNALSAYKVACQMFRRNLIPDLKLCEKVTKKLVLDGMPAEADD 777

Query: 395 VKNRMLEAGLMLD 407
           +  R +E G+  +
Sbjct: 778 LMLRFVERGIQTE 790


>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
          Length = 524

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 123/409 (30%), Positives = 201/409 (49%), Gaps = 12/409 (2%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           L+++ Q++  ++   + +   LL+SL       +   +Y+  + L        +N+++  
Sbjct: 70  LRLYAQLKSLSVPIPVASLHPLLSSLPSAPAFALFADIYRLRLPLCTTT----FNIMLRH 125

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRM-EREGISP 268
            C +    +  +LL +M     R +  TYNT+IA +C +G    AL V   M ER GI+P
Sbjct: 126 LCATGKPVRALELLRQMP----RPNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAP 181

Query: 269 DIVTYNSLIHGFCREGRMREARRLFRDI--KG-ATPNHVTYTTLIDGYCRANDLEEALRL 325
           D  TY +LI G+C+ GRM +A ++F ++  KG   P+ V Y  LI GYC    L+ AL+ 
Sbjct: 182 DKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQY 241

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
           RE M  +G+   V TYN ++  L  + R  DA  +L EM +   +PD  T N LIN YCK
Sbjct: 242 REDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCK 301

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            G+   A++V   M + G+     TY +LI+ F +  ++     L    +  G  P    
Sbjct: 302 EGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVM 361

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+ L++ +C   + E   +++ E   + +  D   Y  L+R FC   ++D A+ L + M 
Sbjct: 362 YNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMT 421

Query: 506 GNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSF 554
             GI  D V Y +L   Y   G+ K    + D+M  +    TL  Y + 
Sbjct: 422 KRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNAL 470



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 117/365 (32%), Positives = 185/365 (50%), Gaps = 8/365 (2%)

Query: 162 MPHLHACT---VLLNSLAKDRLTDMVWKVYKKMVQLGVVA-NIHLYNVLIHACCKSSDVD 217
           MP  +A T   V+    A+ R+     +V ++M + G +A + + Y  LI   CK   ++
Sbjct: 142 MPRPNAVTYNTVIAGFCARGRV-QAALEVMREMRERGGIAPDKYTYATLISGWCKIGRME 200

Query: 218 KVEKLLCEMEFK-DVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSL 276
              K+  EM  K +V      YN LI  YC  G    AL  ++ M + GI+  + TYN L
Sbjct: 201 DAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLL 260

Query: 277 IHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGV 334
           +H    + R  +A  +  +++  G +P+  TY  LI+GYC+  + ++AL + E M+ KGV
Sbjct: 261 MHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGV 320

Query: 335 YPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMK 394
               VTY S++    ++G++++ +RL N   +K I PD V  N LIN++C  GD   A +
Sbjct: 321 RATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYE 380

Query: 395 VKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYC 454
           +   M +  +  D  TY  L+ GFC    +D A+ L+  M   G  P   SY+ L+ GY 
Sbjct: 381 IMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYS 440

Query: 455 NKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSV 514
            K + +  L++ DE + +G    +  Y ALI+  CK  + D A+ L   M   GI  D  
Sbjct: 441 MKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDDAENLMKEMVAKGITPDDS 500

Query: 515 IYTSL 519
            Y SL
Sbjct: 501 TYISL 505



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 117/434 (26%), Positives = 203/434 (46%), Gaps = 30/434 (6%)

Query: 160 NLMPHLHACT----VLLNSLAKDRLTDMVWKVYKKMVQLGV---VANIH-LYNVLIHACC 211
           +++PHL A      +LL + A  R      ++Y ++  L V   VA++H L + L  A  
Sbjct: 41  SVLPHLSASPSLPHLLLTASAAARPHATSLRLYAQLKSLSVPIPVASLHPLLSSLPSAPA 100

Query: 212 KS--SDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
            +  +D+ ++   LC            T+N ++   C  G    AL +  +M R    P+
Sbjct: 101 FALFADIYRLRLPLCTT----------TFNIMLRHLCATGKPVRALELLRQMPR----PN 146

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDIK---GATPNHVTYTTLIDGYCRANDLEEALRLR 326
            VTYN++I GFC  GR++ A  + R+++   G  P+  TY TLI G+C+   +E+A+++ 
Sbjct: 147 AVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAVKVF 206

Query: 327 EVMAAKG-VYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
           + M  KG V P  V YN+++   C  G++  A +   +M ++ IA    T N L++A   
Sbjct: 207 DEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHALFM 266

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
               + A  V   M + G   D FTY  LI+G+CK      A E+   M   G   +  +
Sbjct: 267 DARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVT 326

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+ L+  +  K   +   +L +  V +G+  DV +Y ALI   C    ++ A  +   M+
Sbjct: 327 YTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEME 386

Query: 506 GNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEIL 565
              I  D + Y +L   +   G       ++D+M +R +   L  Y +  + Y+   +I 
Sbjct: 387 KKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIK 446

Query: 566 DLF--WSHVVDRGL 577
           D       ++D+G 
Sbjct: 447 DALRVRDEMMDKGF 460



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 82/237 (34%), Positives = 129/237 (54%), Gaps = 2/237 (0%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D   V ++M+ +   P +    +L+N   K+       +V+++M Q GV A    Y  LI
Sbjct: 272 DAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLI 331

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           +   +   V + ++L      K +R D+  YN LI  +C  G    A  +   ME++ I 
Sbjct: 332 YVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIP 391

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
           PD +TYN+L+ GFC  GR+ EAR L  ++  +G  P+ V+Y TLI GY    D+++ALR+
Sbjct: 392 PDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRV 451

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
           R+ M  KG  P ++TYN++++ LCK  +  DA  L+ EM  K I PD+ T  +LI  
Sbjct: 452 RDEMMDKGFNPTLMTYNALIQGLCKIRQGDDAENLMKEMVAKGITPDDSTYISLIEG 508



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 92/312 (29%), Positives = 153/312 (49%), Gaps = 8/312 (2%)

Query: 120 VKIHDDPDGNSHVLSWLVIF------YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           VK+ D+      V    V++      Y ++      LQ  + M    +   +    +L++
Sbjct: 203 VKVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMH 262

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
           +L  D      + V ++M + G   ++  YN+LI+  CK  +  K  ++  EM  K VRA
Sbjct: 263 ALFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRA 322

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
              TY +LI ++ +KG   E   + +   ++GI PD+V YN+LI+  C  G M  A  + 
Sbjct: 323 TAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIM 382

Query: 294 RDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
            ++  K   P+ +TY TL+ G+C    L+EA  L + M  +G+ P +V+YN+++     +
Sbjct: 383 AEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMK 442

Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
           G I+DA R+ +EM +K   P  +T N LI   CKI     A  +   M+  G+  D  TY
Sbjct: 443 GDIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDDAENLMKEMVAKGITPDDSTY 502

Query: 412 KALIHGFCKAKE 423
            +LI G     E
Sbjct: 503 ISLIEGLTTEDE 514


>gi|297801450|ref|XP_002868609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297314445|gb|EFH44868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 526

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 111/360 (30%), Positives = 180/360 (50%), Gaps = 2/360 (0%)

Query: 187 VYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYC 246
           ++  MV+   + +I  +  L++   K    D V  L   ++   V  DL+T N L+  +C
Sbjct: 58  LFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYTCNLLMNCFC 117

Query: 247 KKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHV 304
           +      A +   ++ + G  PDI T+ SLI+GFC   R+ EA  +   +   G  P+ V
Sbjct: 118 QSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDVV 177

Query: 305 TYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM 364
            YTT+ID  C+   ++ AL L   M   G+ P VV Y S++  LC  GR RDA+ LL  M
Sbjct: 178 IYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGM 237

Query: 365 NEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEM 424
            ++KI PD +T N LI+A+ K G    A ++ N M++  +  + FTY +LI+G C    +
Sbjct: 238 MKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRL 297

Query: 425 DIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRAL 484
           D A+++ + M   G  P   +Y+ L++G+C     E  +K+  E   +GL  +   Y  L
Sbjct: 298 DEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTL 357

Query: 485 IRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL 544
           I+ F    K + AQ +F  M   G+  +   Y  L +     G+      I +DM +R +
Sbjct: 358 IQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREI 417



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 113/402 (28%), Positives = 199/402 (49%), Gaps = 5/402 (1%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           + L +F  M     +P +   T LLN +AK +  D+V  + K +  +GV  +++  N+L+
Sbjct: 54  EALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYTCNLLM 113

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           +  C+SS        L ++       D+FT+ +LI  +C      EA+++ ++M   GI 
Sbjct: 114 NCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIK 173

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRL 325
           PD+V Y ++I   C+ G +  A  LF  ++  G  P+ V YT+L++G C +    +A  L
Sbjct: 174 PDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLL 233

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
              M  + + P V+T+N+++    KEG++ DA  L NEM +  IAP+  T  +LIN  C 
Sbjct: 234 LRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCM 293

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            G    A ++   M   G   D   Y +LI+GFCK K+++ A ++ + M   G + +  +
Sbjct: 294 EGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTIT 353

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+ L+ G+          ++    VSRG+  ++  Y  L+   C   KV+ A  +F  MQ
Sbjct: 354 YTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQ 413

Query: 506 G---NGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL 544
               +G+  +   Y  L +     G+ +    +  DM +R +
Sbjct: 414 KREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDM 455



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 98/328 (29%), Positives = 165/328 (50%), Gaps = 16/328 (4%)

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
           G+S D+ T N L++ FC+  +   A      +   G  P+  T+T+LI+G+C  N +EEA
Sbjct: 101 GVSNDLYTCNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEA 160

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
           + +   M   G+ P VV Y +I+  LCK G + +A  L N+M    I PD V   +L+N 
Sbjct: 161 MSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNG 220

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
            C  G    A  +   M++  +  D  T+ ALI  F K  ++  AKEL   M+    +P+
Sbjct: 221 LCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPN 280

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ L++G C +   +   ++     ++G   DV  Y +LI  FCK +KV+ A ++F 
Sbjct: 281 IFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFY 340

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDN 562
            M   G+ G+++ YT+L   +   G+P    ++   M  R +   ++ Y          N
Sbjct: 341 EMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTY----------N 390

Query: 563 EILD-LFWSHVVDRGLMSKHIFKEMQLR 589
            +L  L ++  V++ LM   IF++MQ R
Sbjct: 391 VLLHCLCYNGKVNKALM---IFEDMQKR 415



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 102/401 (25%), Positives = 196/401 (48%), Gaps = 7/401 (1%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           S L  L+K+  +PD      + L+  +      ++ + + +QM    + P +   T +++
Sbjct: 127 SFLGKLMKLGFEPD--IFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIID 184

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
           SL K+   D    ++ +M   G+  ++ +Y  L++  C S      + LL  M  + ++ 
Sbjct: 185 SLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKP 244

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           D+ T+N LI  + K+G   +A  + + M +  I+P+I TY SLI+G C EGR+ EAR++F
Sbjct: 245 DVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMF 304

Query: 294 --RDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
              + KG  P+ V YT+LI+G+C+   +E+A+++   M+ KG+    +TY ++++     
Sbjct: 305 YLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLV 364

Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEA---GLMLDQ 408
           G+   A  +   M  + + P+  T N L++  C  G    A+ +   M +    G+  + 
Sbjct: 365 GKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNI 424

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
            TY  L+HG C   +++ A  +   M          +Y+ ++ G C     +  L L   
Sbjct: 425 RTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVKDALNLFCS 484

Query: 469 FVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGI 509
             S+G+  +V  Y  +I    ++  +  A  LF  M+ +G+
Sbjct: 485 LPSKGVKPNVVTYTTMISGLFREGLMLEAHVLFRKMKEDGV 525



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 117/225 (52%), Gaps = 5/225 (2%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           Q+F  M      P + A T L+N   K +  +   K++ +M Q G+  N   Y  LI   
Sbjct: 302 QMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGF 361

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER---EGIS 267
                 +  +++   M  + V  ++ TYN L+   C  G   +AL + + M++   +G+ 
Sbjct: 362 GLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVP 421

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
           P+I TYN L+HG C  G++ +A  +F D+  +      +TYT +I G C+A  +++AL L
Sbjct: 422 PNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVKDALNL 481

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIA 370
              + +KGV P VVTY +++  L +EG + +A+ L  +M E  ++
Sbjct: 482 FCSLPSKGVKPNVVTYTTMISGLFREGLMLEAHVLFRKMKEDGVS 526



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 108/226 (47%)

Query: 341 YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML 400
           Y  ILR      +  +A  L + M E +  P  +    L+N   K+      + +   + 
Sbjct: 39  YREILRNGLHSLQFNEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQ 98

Query: 401 EAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEE 460
             G+  D +T   L++ FC++ +  +A   L  ++  GF P   +++ L++G+C  N  E
Sbjct: 99  IMGVSNDLYTCNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIE 158

Query: 461 ALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLA 520
             + ++++ V  G+  DV +Y  +I   CK   VD A  LFN M+  GI  D V+YTSL 
Sbjct: 159 EAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLV 218

Query: 521 YAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
                +G  +    +L  M +R++   +  + +   ++ K+ ++LD
Sbjct: 219 NGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLD 264



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 52/236 (22%), Positives = 103/236 (43%)

Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT 378
             EAL L   M      P ++ +  +L  + K  +      L   +    ++ D  TCN 
Sbjct: 52  FNEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYTCNL 111

Query: 379 LINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAG 438
           L+N +C+      A     ++++ G   D FT+ +LI+GFC    ++ A  ++  M++ G
Sbjct: 112 LMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMG 171

Query: 439 FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQ 498
             P    Y+ ++D  C   + +  L L ++  + G+  DV +Y +L+   C   +   A 
Sbjct: 172 IKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDAD 231

Query: 499 RLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSF 554
            L   M    I  D + + +L  A+ + G+     ++ ++M +  +   +  Y S 
Sbjct: 232 LLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSL 287


>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 528

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 119/411 (28%), Positives = 192/411 (46%), Gaps = 2/411 (0%)

Query: 131 HVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKK 190
           + L  L+  Y     + D   +F+Q       P +HA T L++ L      +    VYKK
Sbjct: 31  NTLVKLITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDILVNSGEFERAELVYKK 90

Query: 191 MVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGM 250
           +VQ G   +   YNVLI    +S  +D   ++  EM+ K    D +TY  L+    K G 
Sbjct: 91  LVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGR 150

Query: 251 HYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTT 308
             EA +  D M   G++P+I TYN L+  F + G++  A  LF ++K  G  P+ VTY  
Sbjct: 151 VQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNI 210

Query: 309 LIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKK 368
           L+D  C A  +  A +L   M   G  P   TY++++  L K GR+ +A+++  EM ++ 
Sbjct: 211 LLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRG 270

Query: 369 IAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAK 428
           +A D V  N+L+    K G+     K+   M   G   D F++  ++    KA + D A+
Sbjct: 271 VAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAR 330

Query: 429 ELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRF 488
           E+   M+++G  P   SY+ L+D Y    +     ++L+E V  G   +   Y +LI   
Sbjct: 331 EVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWL 390

Query: 489 CKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
               +VD A  +   M+  G   D V Y  L     + GE +  + +   M
Sbjct: 391 ATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQM 441



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 107/395 (27%), Positives = 191/395 (48%), Gaps = 2/395 (0%)

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           L+ ++         +++F +M++    P  +    L+N+L K          +  M++ G
Sbjct: 106 LIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERG 165

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
           +  NI  YN+L+ A  K   +D    L  EM+ +  +  + TYN L+   C  G    A 
Sbjct: 166 LTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAAR 225

Query: 256 AVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGY 313
            +  +M  +G SPD  TY++L++G  + GR+ EA ++FR++  +G   + V Y +L+   
Sbjct: 226 KLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATL 285

Query: 314 CRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDN 373
            +A +++   +L + M+ KG +P   ++N+I+  L K  +   A  +   M E    PD 
Sbjct: 286 AKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDL 345

Query: 374 VTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFG 433
           ++ N LI++Y + GD A A ++   M+EAG + +  TY +LIH      ++D A  +L  
Sbjct: 346 ISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEE 405

Query: 434 MLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEK 493
           M  AG  P   +Y+ L+D    +   +   +L  +   +G+  D   Y   I      ++
Sbjct: 406 METAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDR 465

Query: 494 VDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
           +D A  LF  M+  G   D  +Y  L  A  RAG+
Sbjct: 466 LDEALVLFKDMKAVGCPVDKAMYRILIRAAHRAGD 500



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 102/364 (28%), Positives = 162/364 (44%), Gaps = 4/364 (1%)

Query: 125 DPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMV 184
           +PD   +   +LV         Q+    FD M    L P++    +L+++  K    DM 
Sbjct: 132 EPD--EYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMA 189

Query: 185 WKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIAL 244
             ++ +M + G   ++  YN+L+ A C +  V    KL  +M       D +TY+TL+  
Sbjct: 190 LGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNG 249

Query: 245 YCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPN 302
             K G   EA  V   M   G++ D+V YNSL+    + G M    +L +++  KG  P+
Sbjct: 250 LGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPD 309

Query: 303 HVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLN 362
             ++ T++D   +AN  + A  +   M   G  P +++YN ++    + G    A ++L 
Sbjct: 310 AFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLE 369

Query: 363 EMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAK 422
           EM E    P+  T N+LI+     G    A  V   M  AG   D  TY  L+    K  
Sbjct: 370 EMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRG 429

Query: 423 EMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYR 482
           E   A  L   M D G  P   SY+  +DG    +  +  L L  +  + G  VD ++YR
Sbjct: 430 ENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMYR 489

Query: 483 ALIR 486
            LIR
Sbjct: 490 ILIR 493



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 103/400 (25%), Positives = 178/400 (44%), Gaps = 2/400 (0%)

Query: 171 LLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKD 230
           +L  LA   + D +  + K+MV  G     +    LI A  + +       L  + E   
Sbjct: 1   MLVVLASWGILDPLETLLKEMVAEGRPLRPNTLVKLITAYGRGNKSGDAFDLFNQAESFA 60

Query: 231 VRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREAR 290
               +  +  LI +    G    A  V  ++ ++G   D   YN LI  F R G++  A 
Sbjct: 61  CSPTVHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAM 120

Query: 291 RLFRD--IKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
            +FR+  IKG+ P+  TY  L++   +A  ++EA    + M  +G+ P + TYN ++   
Sbjct: 121 EMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAF 180

Query: 349 CKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ 408
            K G++  A  L  EM  +   P  VT N L++A C  G   +A K+ ++M   G   D 
Sbjct: 181 RKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDS 240

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
           +TY  L++G  K+  ++ A ++   M+D G +    +Y+ L+       N + + KL+ E
Sbjct: 241 YTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKE 300

Query: 469 FVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
              +G   D   +  ++    K  K D A+ +F  M  +G   D + Y  L  +Y R G+
Sbjct: 301 MSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGD 360

Query: 529 PKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLF 568
                 +L++M     +   K Y S     A D ++ + F
Sbjct: 361 AAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAF 400



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 81/282 (28%), Positives = 135/282 (47%), Gaps = 2/282 (0%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           ++F +M      P  +  + L+N L K    +   KV+++MV  GV  ++  YN L+   
Sbjct: 226 KLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATL 285

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
            K+ ++D+V KL+ EM  K    D F++NT++    K      A  V  RM   G  PD+
Sbjct: 286 AKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDL 345

Query: 271 VTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
           ++YN LI  + R G   +AR++  ++   G  P   TY +LI        ++EA  + E 
Sbjct: 346 ISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEE 405

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M   G  P VVTYN ++  L K G  + A RL  +M +K + PD ++    I+       
Sbjct: 406 METAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDR 465

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL 430
              A+ +   M   G  +D+  Y+ LI    +A + ++  +L
Sbjct: 466 LDEALVLFKDMKAVGCPVDKAMYRILIRAAHRAGDTELEAQL 507



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 127/274 (46%), Gaps = 4/274 (1%)

Query: 126 PDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVW 185
           PD  S+  S LV         ++  +VF +M    +   L     LL +LAK    D VW
Sbjct: 238 PD--SYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVW 295

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
           K+ K+M + G   +   +N ++ A  K++  D   ++   M     + DL +YN LI  Y
Sbjct: 296 KLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSY 355

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNH 303
            + G   +A  + + M   G  P+  TYNSLIH    +G++ EA  +  +++  G  P+ 
Sbjct: 356 ARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDV 415

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
           VTY  L+D   +  + + A RL + M  KGV P  ++Y   +  L  + R+ +A  L  +
Sbjct: 416 VTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKD 475

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKN 397
           M       D      LI A  + GDT    ++K+
Sbjct: 476 MKAVGCPVDKAMYRILIRAAHRAGDTELEAQLKH 509


>gi|451798815|gb|AGF69111.1| PPR [Raphanus sativus]
          Length = 479

 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 116/406 (28%), Positives = 198/406 (48%), Gaps = 18/406 (4%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           + L +F QM      P++   T L+N L ++        +  +MV+ G+  N   Y  ++
Sbjct: 68  EALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIV 123

Query: 208 HACCKSSDVDKVEKLLCEME-FKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
              CK  D      LL +ME    ++ D+  Y+ +I    K G H +A  +   M+ +GI
Sbjct: 124 DGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGI 183

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEALR 324
            PDIVTY+ +I+GFC  G+  EA+RL ++  ++  +P+ VT++ LI+   +  DL  A  
Sbjct: 184 FPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQD 243

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEK-----------KIAPDN 373
           L + M + GV P VVT N++L  LC  G+++DA  +   M +             + PD 
Sbjct: 244 LLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDV 303

Query: 374 VTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFG 433
            T N LI+     G    A ++   M   G++ D  TY ++I+G CK   +D A ++   
Sbjct: 304 QTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDS 363

Query: 434 MLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEK 493
           M    FSP+  +++ L+ GYC     +  L+L  E   RG+  +   Y  LIR F K   
Sbjct: 364 MGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGN 423

Query: 494 VDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
           ++ +  +F  M  +G+  D++   ++    W   E K    +L+++
Sbjct: 424 INGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRALAMLEEL 469



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 113/403 (28%), Positives = 196/403 (48%), Gaps = 21/403 (5%)

Query: 187 VYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYC 246
            + K+ +LG    +  +N L+H  C    V +   L  +M     + ++ T+ TL+   C
Sbjct: 37  TFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQM----CKPNVVTFTTLMNGLC 92

Query: 247 KKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGAT---PNH 303
           ++G   EA+A+ DRM  +G+ P+ +TY +++ G C+ G    A  L R ++  +   P+ 
Sbjct: 93  REGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDV 152

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
           V Y+ +IDG  +     +A  L   M  KG++P +VTY+ ++   C  G+  +A RLL E
Sbjct: 153 VIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQE 212

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
           M  +KI+PD VT + LINA  K GD  SA  +   M+ +G+  +  T   L+ G C + +
Sbjct: 213 MLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGK 272

Query: 424 MDIAKELLFGM------LDA-----GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSR 472
           +  A E+   M      +DA     G  P   +Y+ L+ G  N+       +L +E   R
Sbjct: 273 LKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHR 332

Query: 473 GLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKAC 532
           G+  D   Y ++I   CK+ ++D A ++F+ M       + V + +L   Y +AG     
Sbjct: 333 GIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDG 392

Query: 533 SDILDDMYRRRLMITLKIYRSFSASYAKDNEI---LDLFWSHV 572
            ++  +M RR ++     Y +    + K   I   LD+F   +
Sbjct: 393 LELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMI 435



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 115/411 (27%), Positives = 194/411 (47%), Gaps = 30/411 (7%)

Query: 194 LGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYE 253
           L +  +I+ +N+LI   C  S +        ++        L T+NTL+   C +    E
Sbjct: 9   LQIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSE 68

Query: 254 ALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLID 311
           AL +  +M +    P++VT+ +L++G CREGR+ EA  L   +   G  PN +TY T++D
Sbjct: 69  ALDLFHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVD 124

Query: 312 GYCRANDLEEALRL-REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIA 370
           G C+  D   AL L R++     + P VV Y++I+  L K+GR  DA  L  EM +K I 
Sbjct: 125 GMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIF 184

Query: 371 PDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL 430
           PD VT + +IN +C  G  + A ++   ML   +  D  T+  LI+   K  +++ A++L
Sbjct: 185 PDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDL 244

Query: 431 LFGMLDAGFSPSYCSYSWLVDGYCN-----------KNNEEALLKLLDEFVSRGLCVDVS 479
           L  M+ +G  P+  + + L+DG C+           K  +++++ +       G+  DV 
Sbjct: 245 LQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQ 304

Query: 480 VYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
            Y  LI     + K   A+ L+  M   GI+ D+V Y+S+     +       + + D M
Sbjct: 305 TYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSM 364

Query: 540 YRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKEMQLRN 590
             +     +  + +    Y K         + +VD GL    +F EM  R 
Sbjct: 365 GSKSFSPNIVTFNTLITGYCK---------AGMVDDGL---ELFCEMGRRG 403



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 106/445 (23%), Positives = 202/445 (45%), Gaps = 30/445 (6%)

Query: 54  CHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTP 113
           C    L  A   + +     +  +L +  T++H L        A ++  ++   + ++  
Sbjct: 26  CSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQMCKPNVVTFT 85

Query: 114 SVLNALVK--------------IHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMR-V 158
           +++N L +              + D    N      +V     +  T   L +  +M  +
Sbjct: 86  TLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEL 145

Query: 159 HNLMPHLHACTVLLNSLAKD-RLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVD 217
            ++ P +   + +++ L KD R TD    ++ +M   G+  +I  Y+ +I+  C S    
Sbjct: 146 SHIKPDVVIYSAIIDGLWKDGRHTD-AQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWS 204

Query: 218 KVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLI 277
           + ++LL EM  + +  D+ T++ LI    K+G    A  +   M   G+ P++VT N+L+
Sbjct: 205 EAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLL 264

Query: 278 HGFCREGRMREARRLFRDIK-------------GATPNHVTYTTLIDGYCRANDLEEALR 324
            G C  G++++A  +F+ ++             G  P+  TY  LI G        EA  
Sbjct: 265 DGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEE 324

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           L E M  +G+ P  VTY+S++  LCK+ R+ +A ++ + M  K  +P+ VT NTLI  YC
Sbjct: 325 LYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYC 384

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           K G     +++   M   G++ +  TY  LI GF K   ++ + ++   M+ +G  P   
Sbjct: 385 KAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTI 444

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEF 469
           +   ++ G  +K   +  L +L+E 
Sbjct: 445 TIRNMLTGLWSKEELKRALAMLEEL 469



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/154 (24%), Positives = 74/154 (48%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           +++++M    ++P     + ++N L K    D   +++  M       NI  +N LI   
Sbjct: 324 ELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGY 383

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           CK+  VD   +L CEM  + + A+  TY TLI  + K G    +L +   M   G+ PD 
Sbjct: 384 CKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDT 443

Query: 271 VTYNSLIHGFCREGRMREARRLFRDIKGATPNHV 304
           +T  +++ G   +  ++ A  +  +++ +  +H+
Sbjct: 444 ITIRNMLTGLWSKEELKRALAMLEELQMSMDHHL 477


>gi|414869870|tpg|DAA48427.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
 gi|414869871|tpg|DAA48428.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
          Length = 741

 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 124/498 (24%), Positives = 220/498 (44%), Gaps = 25/498 (5%)

Query: 83  TMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYAN 142
           T++  L ++      +++  ++ +R+  +  +++NA     D P    H+ S L      
Sbjct: 48  TLLMALARHGMLSDMESLAARMPVRNLHTYTTLINAYCHAGDLPAAKRHLSSLLRA---- 103

Query: 143 LKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHL 202
                             L P  HA T  +    +  L     +++  M Q G       
Sbjct: 104 -----------------GLAPDSHAYTSFVLGYCRTGLFAHACRLFLLMPQRGCARTPFT 146

Query: 203 YNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRME 262
           Y  L+   C +  V +   +   M       D   Y+ ++   C  G   EA+A+     
Sbjct: 147 YAALLQGLCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAM 206

Query: 263 REGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLE 320
            +G  P++  YN+LI G+C  G +  A  +F+ +  KG  PN  TYT LI G+C++  +E
Sbjct: 207 GKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVE 266

Query: 321 EALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLI 380
            A+ L   M   G+ P VVTY ++++  C EG +  A RLL+ M    +AP+  TC  LI
Sbjct: 267 RAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLI 326

Query: 381 NAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFS 440
           +A CK G    A +    +++ G+ ++Q  Y ++I   CK+ + D A  L+  ++  GF 
Sbjct: 327 DALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFV 386

Query: 441 PSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRL 500
           P    YS L+DG C +N     + LL++ +  G+  +   +  LI +  ++ + D  + +
Sbjct: 387 PDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMI 446

Query: 501 FNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAK 560
            + M   G+  D V YT    +Y + G  +    ++  M    +   L  Y +    YA 
Sbjct: 447 SDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYAN 506

Query: 561 DNEILDLFWS--HVVDRG 576
              +   F S  +++D G
Sbjct: 507 LGLVSQAFSSLKNMIDNG 524



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 119/497 (23%), Positives = 205/497 (41%), Gaps = 90/497 (18%)

Query: 145 MTQDGLQVFDQMRVHNLMPHLHACTVLLNSL-AKDRLTDMVWKVYKKMVQLGVVANIHLY 203
           M ++ + VF  M      P  H  +++++ L    R  + V  +   M + G V N+ +Y
Sbjct: 159 MVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGK-GFVPNVAVY 217

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER 263
           N LI   C + D++    +   M+ K    ++ TY  LI  +CK G    A+ +  RM  
Sbjct: 218 NALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMIE 277

Query: 264 EGISPDIVTYNSLIHGFCREGRMREARRLFRDI--------------------------- 296
            G++P++VTY +LI G C EG +  A RL   +                           
Sbjct: 278 AGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEE 337

Query: 297 ----------KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILR 346
                     KG   N V YT++ID  C++   + A  L + +  +G  P    Y+S++ 
Sbjct: 338 AQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLID 397

Query: 347 KLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLML 406
            LC+E ++ +A  LLN+M E  +  + V    LI+ + +   + S   + +RM  AG+  
Sbjct: 398 GLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKP 457

Query: 407 DQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCN----------- 455
           D  TY   I  +C+   M+ A+ ++  M+D G  P+  +Y+ L+ GY N           
Sbjct: 458 DVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFSSL 517

Query: 456 --------KNNEEAL----------------------------LKLLDEFVSRGLCVDVS 479
                   K N+E+                             +K+L+E +   + +  S
Sbjct: 518 KNMIDNGCKPNDESYTVLLGLLLKKNSYHDLVADSISLWKIVDMKVLEELLEEVIKLQCS 577

Query: 480 ----VYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDI 535
               VY   IR   K ++++ A+     MQ   +     +YT +    +R    K     
Sbjct: 578 SASYVYDCFIRCLSKVDRLEEAKSFLVGMQSANLTPSEDVYTCMIECCYRMKLLKEALRF 637

Query: 536 LDDMYRRRLMITLKIYR 552
           LD M +R  +  L+ YR
Sbjct: 638 LDSMVKRNYLPRLESYR 654



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 77/358 (21%), Positives = 139/358 (38%), Gaps = 67/358 (18%)

Query: 169 TVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEF 228
           T ++++L K    D    + +K++  G V + H+Y+ LI   C+ + + +   LL +M  
Sbjct: 358 TSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIE 417

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
             V+A+   +  LI  + ++        + DRM   G+ PD+VTY   I  +C++GRM +
Sbjct: 418 SGVQANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMED 477

Query: 289 ARRLFRDI--KGATPNHVTYTTLIDGY--------------------CRAND-------- 318
           A  +   +   G  PN  TY TLI GY                    C+ ND        
Sbjct: 478 AESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDNGCKPNDESYTVLLG 537

Query: 319 ------------------------------LEEALRLREVMAAKGVYPGVVTYNSILRKL 348
                                         LEE ++L+   A+         Y+  +R L
Sbjct: 538 LLLKKNSYHDLVADSISLWKIVDMKVLEELLEEVIKLQCSSAS-------YVYDCFIRCL 590

Query: 349 CKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ 408
            K  R+ +A   L  M    + P       +I    ++     A++  + M++   +   
Sbjct: 591 SKVDRLEEAKSFLVGMQSANLTPSEDVYTCMIECCYRMKLLKEALRFLDSMVKRNYLPRL 650

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLL 466
            +Y+ +I   C+      AK +   +L   ++    ++  L+DG   K N     +LL
Sbjct: 651 ESYRFIICALCEEGSFHTAKSIFGDILSKEYNRDEIAWKILIDGLLQKGNTADCSRLL 708



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 83/374 (22%), Positives = 146/374 (39%), Gaps = 70/374 (18%)

Query: 81  HWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFY 140
           + +MI  L K+  F  A N+++KI    F+    + ++L+      DG       L    
Sbjct: 357 YTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLI------DGLCRENKLLEAIS 410

Query: 141 ANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANI 200
               M + G+Q        N +P     T+L++   ++  +D    +  +M   GV  ++
Sbjct: 411 LLNDMIESGVQA-------NAVPF----TILIDKHLREFRSDSPKMISDRMAAAGVKPDV 459

Query: 201 HLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDR 260
             Y V I + C+   ++  E ++ +M    VR +L TYNTLI  Y   G+  +A +    
Sbjct: 460 VTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFSSLKN 519

Query: 261 MEREGISP-------------------DIVT----------------------------- 272
           M   G  P                   D+V                              
Sbjct: 520 MIDNGCKPNDESYTVLLGLLLKKNSYHDLVADSISLWKIVDMKVLEELLEEVIKLQCSSA 579

Query: 273 ---YNSLIHGFCREGRMREARRLFRDIKGA--TPNHVTYTTLIDGYCRANDLEEALRLRE 327
              Y+  I    +  R+ EA+     ++ A  TP+   YT +I+   R   L+EALR  +
Sbjct: 580 SYVYDCFIRCLSKVDRLEEAKSFLVGMQSANLTPSEDVYTCMIECCYRMKLLKEALRFLD 639

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
            M  +   P + +Y  I+  LC+EG    A  +  ++  K+   D +    LI+   + G
Sbjct: 640 SMVKRNYLPRLESYRFIICALCEEGSFHTAKSIFGDILSKEYNRDEIAWKILIDGLLQKG 699

Query: 388 DTASAMKVKNRMLE 401
           +TA   ++ + M E
Sbjct: 700 NTADCSRLLSFMEE 713



 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 51/227 (22%), Positives = 93/227 (40%), Gaps = 18/227 (7%)

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAK-----DRLTDMV--WKVY 188
           L+  YANL +          M  +   P+  + TVLL  L K     D + D +  WK+ 
Sbjct: 500 LIKGYANLGLVSQAFSSLKNMIDNGCKPNDESYTVLLGLLLKKNSYHDLVADSISLWKIV 559

Query: 189 ---------KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYN 239
                    +++++L   +  ++Y+  I    K   +++ +  L  M+  ++      Y 
Sbjct: 560 DMKVLEELLEEVIKLQCSSASYVYDCFIRCLSKVDRLEEAKSFLVGMQSANLTPSEDVYT 619

Query: 240 TLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--K 297
            +I    +  +  EAL   D M +    P + +Y  +I   C EG    A+ +F DI  K
Sbjct: 620 CMIECCYRMKLLKEALRFLDSMVKRNYLPRLESYRFIICALCEEGSFHTAKSIFGDILSK 679

Query: 298 GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSI 344
               + + +  LIDG  +  +  +  RL   M  +   PG   Y+ +
Sbjct: 680 EYNRDEIAWKILIDGLLQKGNTADCSRLLSFMEEQNCRPGSAIYSRL 726


>gi|414871694|tpg|DAA50251.1| TPA: hypothetical protein ZEAMMB73_705675 [Zea mays]
          Length = 1161

 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 129/494 (26%), Positives = 227/494 (45%), Gaps = 38/494 (7%)

Query: 85  IHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVL-SWLVIFYANL 143
           + IL + +    A ++L+ +A+  F S  ++  +L++     D  +HV+   LV  Y   
Sbjct: 111 VPILIQAQMHSQAMSVLKHLAVTGF-SCTAIFTSLLRTISRFDPTNHVVFELLVKAYVKE 169

Query: 144 KMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLY 203
           +   D       M          +C  +LN+L ++  +  VW   ++ +       +   
Sbjct: 170 RKVLDAAVAVLFMDDCGFKASPVSCNTILNALVEEGESKHVWLFLRESLARKFPLGVTTC 229

Query: 204 NVLIHACCKSSDVDKVEKLL-------------------------------C---EMEFK 229
           N+L+++ C + +  K E +L                               C   +ME  
Sbjct: 230 NILLNSLCTNGEFRKAEDMLQKMKSCHISNSVTYNTILHWYVKKGRFKAALCVLEDMERD 289

Query: 230 DVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA 289
            V+AD++TYN +I   C+      A  +  RM ++ ++PD  TYN+LI+GF REG++  A
Sbjct: 290 SVQADVYTYNIMIDKLCRIKRSTRAFLLLKRMRKDDLTPDECTYNTLINGFFREGKINHA 349

Query: 290 RRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRK 347
           R +F  +  +   P+  TYTT+IDGYCR   +++AL +   M   GV P  +TY+++L  
Sbjct: 350 RYVFNHMLRQNLVPSVATYTTMIDGYCRNRRIDKALSILSEMQITGVMPSELTYSALLNG 409

Query: 348 LCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLD 407
            CK   +  A  L+ ++  + I  +      LI+ +C++G+ + A ++   M E G+  D
Sbjct: 410 YCKVSMLGPAIYLMEDLKSRGITINKTMRTILIDGFCQVGEISKAKQILKSMFEDGIDPD 469

Query: 408 QFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLD 467
             TY ALI+G C+  +M   KE+L  M  +G  P+   Y+ L+  YC     +  LK   
Sbjct: 470 VITYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKEALKHFV 529

Query: 468 EFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
           +   RGL  +  ++ AL+  F ++  +  A+     M    I  DSV +  +  +Y   G
Sbjct: 530 DIYRRGLVANPVIHNALLHAFYREGMITEAEHFRQYMSRMNISFDSVSFNRIIDSYCHRG 589

Query: 528 EPKACSDILDDMYR 541
                  + DDM R
Sbjct: 590 NIVGAFSVYDDMVR 603



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 106/390 (27%), Positives = 197/390 (50%), Gaps = 2/390 (0%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           VF+ M   NL+P +   T +++   ++R  D    +  +M   GV+ +   Y+ L++  C
Sbjct: 352 VFNHMLRQNLVPSVATYTTMIDGYCRNRRIDKALSILSEMQITGVMPSELTYSALLNGYC 411

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           K S +     L+ +++ + +  +      LI  +C+ G   +A  +   M  +GI PD++
Sbjct: 412 KVSMLGPAIYLMEDLKSRGITINKTMRTILIDGFCQVGEISKAKQILKSMFEDGIDPDVI 471

Query: 272 TYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           TY++LI+G CR  +M E + +   ++  G  PN V YTTLI  YC+A  ++EAL+    +
Sbjct: 472 TYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKEALKHFVDI 531

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
             +G+    V +N++L    +EG I +A      M+   I+ D+V+ N +I++YC  G+ 
Sbjct: 532 YRRGLVANPVIHNALLHAFYREGMITEAEHFRQYMSRMNISFDSVSFNRIIDSYCHRGNI 591

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
             A  V + M+  G   +  TY+ L+ G C+   +  A++ +  +LD  F+    +++ L
Sbjct: 592 VGAFSVYDDMVRYGYSPNVCTYQNLLRGLCQGGHLVQARQFMSCLLDIPFAIDEKTFNAL 651

Query: 450 VDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGI 509
           + G C     +  L L ++ +      D+  Y  L+  FC+K K+  A  +  +M   G+
Sbjct: 652 LLGICRYGTLDEALDLCEKMIKNNCLPDIHTYTILLSGFCRKGKILPALVILQMMLEKGV 711

Query: 510 LGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
           + D+V YT L       G+ KA S +  ++
Sbjct: 712 VPDTVAYTCLLNGLINEGQVKAASYVFHEI 741



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 107/500 (21%), Positives = 229/500 (45%), Gaps = 20/500 (4%)

Query: 68  ESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPD 127
           ES    +   + +   +++ L  N  F+ A++ML+K      + +  + N++        
Sbjct: 216 ESLARKFPLGVTTCNILLNSLCTNGEFRKAEDMLQK------MKSCHISNSVTY------ 263

Query: 128 GNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKV 187
             + +L W    Y      +  L V + M   ++   ++   ++++ L + + +   + +
Sbjct: 264 --NTILHW----YVKKGRFKAALCVLEDMERDSVQADVYTYNIMIDKLCRIKRSTRAFLL 317

Query: 188 YKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCK 247
            K+M +  +  +   YN LI+   +   ++    +   M  +++   + TY T+I  YC+
Sbjct: 318 LKRMRKDDLTPDECTYNTLINGFFREGKINHARYVFNHMLRQNLVPSVATYTTMIDGYCR 377

Query: 248 KGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVT 305
                +AL++   M+  G+ P  +TY++L++G+C+   +  A  L  D+K  G T N   
Sbjct: 378 NRRIDKALSILSEMQITGVMPSELTYSALLNGYCKVSMLGPAIYLMEDLKSRGITINKTM 437

Query: 306 YTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMN 365
            T LIDG+C+  ++ +A ++ + M   G+ P V+TY++++  +C+  ++ +   +L+ M 
Sbjct: 438 RTILIDGFCQVGEISKAKQILKSMFEDGIDPDVITYSALINGMCRMAKMHETKEILSRMQ 497

Query: 366 EKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMD 425
           +  I P++V   TLI  YCK G    A+K    +   GL+ +   + AL+H F +   + 
Sbjct: 498 KSGILPNDVLYTTLICYYCKAGYVKEALKHFVDIYRRGLVANPVIHNALLHAFYREGMIT 557

Query: 426 IAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
            A+     M     S    S++ ++D YC++ N      + D+ V  G   +V  Y+ L+
Sbjct: 558 EAEHFRQYMSRMNISFDSVSFNRIIDSYCHRGNIVGAFSVYDDMVRYGYSPNVCTYQNLL 617

Query: 486 RRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
           R  C+   +  A++  + +       D   + +L     R G      D+ + M +   +
Sbjct: 618 RGLCQGGHLVQARQFMSCLLDIPFAIDEKTFNALLLGICRYGTLDEALDLCEKMIKNNCL 677

Query: 546 ITLKIYRSFSASYAKDNEIL 565
             +  Y    + + +  +IL
Sbjct: 678 PDIHTYTILLSGFCRKGKIL 697



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 102/406 (25%), Positives = 202/406 (49%), Gaps = 7/406 (1%)

Query: 149  GLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMV-QLGVVANIHLYNVLI 207
             L +   M    ++P   A T LLN L  +        V+ +++ + G+ A+   YN L+
Sbjct: 699  ALVILQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFHEIICKEGLYADCIAYNSLM 758

Query: 208  HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
            +   KS +V+ +++++ +M   +V  +  +YN L+  Y K+G   ++L +   M R+GI 
Sbjct: 759  NGYLKSRNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIR 818

Query: 268  PDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEALRL 325
            PD VTY  LI G    G +  A +      ++G  P+ + +  LI  +   + +  AL++
Sbjct: 819  PDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQV 878

Query: 326  REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
               M    + P   T+++++  L ++G +  ++++L+EM +  + P++     L+NA C+
Sbjct: 879  FNCMKWLHMSPSSKTFSAMINGLIRKGYLDHSHKVLHEMLQVGLQPNHTHYIALVNAKCR 938

Query: 386  IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            +G+   A ++K  M   G++  +    ++I G C+  +++ A  +   M+ +G  P+  +
Sbjct: 939  VGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSSMMRSGMVPTVAT 998

Query: 446  YSWLVDGYCNKNN-EEAL-LKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNL 503
            ++ L+   C ++   +AL LK L E     L VDV  Y  LI   CK + +  A  L+  
Sbjct: 999  FTTLMHSLCKESKIADALHLKRLMELCR--LRVDVVSYNVLITGLCKDKHISDALDLYGE 1056

Query: 504  MQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLK 549
            M+  G+  +   Y +L  A +  G  +   ++L+D+  R L+   K
Sbjct: 1057 MKSKGLWPNITTYITLTGAMYSTGRVQNGEELLEDIEERGLIPAYK 1102



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 105/421 (24%), Positives = 193/421 (45%), Gaps = 3/421 (0%)

Query: 149  GLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIH 208
               V+D M  +   P++     LL  L +        +    ++ +    +   +N L+ 
Sbjct: 594  AFSVYDDMVRYGYSPNVCTYQNLLRGLCQGGHLVQARQFMSCLLDIPFAIDEKTFNALLL 653

Query: 209  ACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISP 268
              C+   +D+   L  +M   +   D+ TY  L++ +C+KG    AL +   M  +G+ P
Sbjct: 654  GICRYGTLDEALDLCEKMIKNNCLPDIHTYTILLSGFCRKGKILPALVILQMMLEKGVVP 713

Query: 269  DIVTYNSLIHGFCREGRMREARRLFRDI---KGATPNHVTYTTLIDGYCRANDLEEALRL 325
            D V Y  L++G   EG+++ A  +F +I   +G   + + Y +L++GY ++ ++    R+
Sbjct: 714  DTVAYTCLLNGLINEGQVKAASYVFHEIICKEGLYADCIAYNSLMNGYLKSRNVNTIKRM 773

Query: 326  REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
               M    VYP   +YN ++    K G+   +  L   M  K I PDNVT   LI    +
Sbjct: 774  MSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSE 833

Query: 386  IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
             G    A+K   +M+  G+  D+  +  LI  F +  +M  A ++   M     SPS  +
Sbjct: 834  CGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQVFNCMKWLHMSPSSKT 893

Query: 446  YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
            +S +++G   K   +   K+L E +  GL  + + Y AL+   C+  ++D A RL   M+
Sbjct: 894  FSAMINGLIRKGYLDHSHKVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMK 953

Query: 506  GNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEIL 565
              GI+   V  +S+     R G+ +    +   M R  ++ T+  + +   S  K+++I 
Sbjct: 954  AIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSSMMRSGMVPTVATFTTLMHSLCKESKIA 1013

Query: 566  D 566
            D
Sbjct: 1014 D 1014



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 96/333 (28%), Positives = 151/333 (45%), Gaps = 36/333 (10%)

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDIKGA-TPNHVTYTTLIDGYCRANDLEEALRLREV 328
           + T N L++  C  G  R+A  + + +K     N VTY T++  Y +    + AL + E 
Sbjct: 226 VTTCNILLNSLCTNGEFRKAEDMLQKMKSCHISNSVTYNTILHWYVKKGRFKAALCVLED 285

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M    V   V TYN ++ KLC+  R   A  LL  M +  + PD  T NTLIN + + G 
Sbjct: 286 MERDSVQADVYTYNIMIDKLCRIKRSTRAFLLLKRMRKDDLTPDECTYNTLINGFFREGK 345

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
              A  V N ML   L+    TY  +I G+C+ + +D A  +L  M   G  PS  +YS 
Sbjct: 346 INHARYVFNHMLRQNLVPSVATYTTMIDGYCRNRRIDKALSILSEMQITGVMPSELTYSA 405

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCV-------------------------------- 476
           L++GYC  +     + L+++  SRG+ +                                
Sbjct: 406 LLNGYCKVSMLGPAIYLMEDLKSRGITINKTMRTILIDGFCQVGEISKAKQILKSMFEDG 465

Query: 477 ---DVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACS 533
              DV  Y ALI   C+  K+   + + + MQ +GIL + V+YT+L   Y +AG  K   
Sbjct: 466 IDPDVITYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKEAL 525

Query: 534 DILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
               D+YRR L+    I+ +   ++ ++  I +
Sbjct: 526 KHFVDIYRRGLVANPVIHNALLHAFYREGMITE 558


>gi|125555763|gb|EAZ01369.1| hypothetical protein OsI_23402 [Oryza sativa Indica Group]
          Length = 619

 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 130/480 (27%), Positives = 232/480 (48%), Gaps = 51/480 (10%)

Query: 86  HILTKNKHFKSAQNMLEK-IALRDFLSTPSVLN----ALVKIHDDPDGNSHVLSWLVIFY 140
           H+L +++ +  ++ +L + +ALR      S+++    A + +       + V+  L+   
Sbjct: 73  HLLARDRLYAHSRRVLSRLVALRRPHLAASLVDLLHRAALALGPRRSALASVVDTLLSVL 132

Query: 141 ANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYK----------- 189
           A+  +  D ++   ++R   + P+   C  +L  LA+DR   +V ++++           
Sbjct: 133 ADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLPAPNVFTFN 192

Query: 190 --------------------KMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFK 229
                               +M ++G + ++  +N LI    K  ++D+VE+L+ EM   
Sbjct: 193 IVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRS 252

Query: 230 DVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA 289
             +AD+ TYN LI  +CK G    A      M+REG+  ++VT+++ +  FC+EG +REA
Sbjct: 253 GCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREA 312

Query: 290 RRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRK 347
            +LF    ++G   N  TYT LIDG C+A  L++A+ L + M  +GV   VVTY  ++  
Sbjct: 313 MKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDG 372

Query: 348 LCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLD 407
           LCKE ++ +A  +L  M +  +  + +   TLI+ +    ++  A+ + + M   GL LD
Sbjct: 373 LCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELD 432

Query: 408 QFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLD 467
              Y ALI G C   ++D AK LL  M ++G  P+Y  Y+ ++D           + +L 
Sbjct: 433 ISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQ 492

Query: 468 EFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
           + +  G   +           C  E V    +LFN M   G+  D V+YT+L   Y + G
Sbjct: 493 KILDSGFQPNNG---------CLNEAV----QLFNEMVHKGMSLDKVVYTALLDGYLKQG 539



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 94/325 (28%), Positives = 153/325 (47%), Gaps = 15/325 (4%)

Query: 128 GNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKV 187
            N    S  V  +    + ++ +++F QMRV  +  +    T L++   K    D    +
Sbjct: 291 ANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVL 350

Query: 188 YKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCK 247
             +MV+ GV  N+  Y VL+   CK   V + E +L  ME   VRA+   Y TLI  +  
Sbjct: 351 LDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFM 410

Query: 248 KGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR--DIKGATPNHVT 305
                +AL +   M+ +G+  DI  Y +LI G C   ++ EA+ L    D  G  PN++ 
Sbjct: 411 NKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYII 470

Query: 306 YTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMN 365
           YTT++D   ++  + EA+ + + +   G  P               G + +A +L NEM 
Sbjct: 471 YTTMMDACFKSGKVPEAIAMLQKILDSGFQP-------------NNGCLNEAVQLFNEMV 517

Query: 366 EKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMD 425
            K ++ D V    L++ Y K G+   A  +K +M+++GL LD F Y   I GFC    M 
Sbjct: 518 HKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMP 577

Query: 426 IAKELLFGMLDAGFSPSYCSYSWLV 450
            A+E+   M+  G +P    Y+ L+
Sbjct: 578 EAREVFSEMIGHGIAPDRAVYNCLI 602



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 104/418 (24%), Positives = 185/418 (44%), Gaps = 24/418 (5%)

Query: 126 PDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVW 185
           P  N    + ++ F        +   +F +M+    +P +     L++   K    D V 
Sbjct: 184 PAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVE 243

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
           ++ ++M + G  A++  YN LI+  CK   ++        M+ + V A++ T++T +  +
Sbjct: 244 QLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAF 303

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNH 303
           CK+G+  EA+ +  +M   G++ +  TY  LI G C+ GR+ +A  L  ++  +G   N 
Sbjct: 304 CKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNV 363

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
           VTYT L+DG C+   + EA  +  +M   GV    + Y +++           A  LL+E
Sbjct: 364 VTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSE 423

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
           M  K +  D      LI   C +     A  +  +M E+GL  +   Y  ++    K+ +
Sbjct: 424 MKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGK 483

Query: 424 MDIAKELLFGMLDAGFSPS----------------------YCSYSWLVDGYCNKNNEEA 461
           +  A  +L  +LD+GF P+                         Y+ L+DGY  + N   
Sbjct: 484 VPEAIAMLQKILDSGFQPNNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHD 543

Query: 462 LLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
              L  + +  GL +D+  Y   I  FC    +  A+ +F+ M G+GI  D  +Y  L
Sbjct: 544 AFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCL 601



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 69/271 (25%), Positives = 117/271 (43%), Gaps = 24/271 (8%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D + + D+M    +  ++   TVL++ L K+R       V + M + GV AN  LY  LI
Sbjct: 346 DAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLI 405

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           H    + + +K   LL EM+ K +  D+  Y  LI   C      EA ++  +M+  G+ 
Sbjct: 406 HGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLE 465

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI------------------------KGATPNH 303
           P+ + Y +++    + G++ EA  + + I                        KG + + 
Sbjct: 466 PNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNNGCLNEAVQLFNEMVHKGMSLDK 525

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
           V YT L+DGY +  +L +A  L+  M   G+   +  Y   +   C    + +A  + +E
Sbjct: 526 VVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSE 585

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMK 394
           M    IAPD    N LI    +I +     K
Sbjct: 586 MIGHGIAPDRAVYNCLITQIPEIRELGGGNK 616


>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 821

 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 131/475 (27%), Positives = 218/475 (45%), Gaps = 19/475 (4%)

Query: 66  WAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDD 125
           +A+      K SL +  TMI+IL K    + A  +  KI   D                 
Sbjct: 185 YAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKIFQFDLC--------------- 229

Query: 126 PDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVW 185
           PD  ++  + L++ +   +      +VFD+M      P+    + L+N L  +       
Sbjct: 230 PDAFTY--TSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAM 287

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
            + ++M + G+   ++ Y V I + C    VD    L+  M  K     + TY  +I+  
Sbjct: 288 DMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGL 347

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF--RDIKGATPNH 303
            + G    A+ +  +M +EG+ P+ VTYN+LI+  C EGR   A ++F   +  G   N 
Sbjct: 348 FRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANA 407

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
            TY  +I G    +D+E+A+ +   M   G  P VVTYN+++ +  K G + +A R L  
Sbjct: 408 QTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYM 467

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
           M E    PD  T   LI+ +CK G   SA      ML+ G+  +Q+TY A+I G+CK  +
Sbjct: 468 MKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGK 527

Query: 424 MDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRA 483
           +D+A  L   M + G S S  +Y+ ++ G    N      K   +   +GL  +   Y +
Sbjct: 528 IDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTS 587

Query: 484 LIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDD 538
           LI   CK    + A ++F+ M+    L ++  YTSL Y   + G+  A   + ++
Sbjct: 588 LINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAAERLTEN 642



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 151/597 (25%), Positives = 245/597 (41%), Gaps = 53/597 (8%)

Query: 14  IKTISAIMLKGHWAKLLNPNI---ASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESA 70
            K +  I    HW K  NP +   AS+L    + K++    N       +  FF W  S 
Sbjct: 44  FKVLDLISTDPHWPK--NPELNRLASTLRPHHVSKIINTHINT----DTALQFFYWI-SK 96

Query: 71  VPNYKHSLQSHWTMIHILTKNKHFKSAQN--MLEKIALRDFLSTPSVLNALVKIHDDPDG 128
              YKH +    +M++ L K+K    A +  +L   A R+      V + L  I     G
Sbjct: 97  RHFYKHDMGCFVSMLNRLVKDKILAPADHVRILMIKACRNEDELKRVTDFLHGISSSDSG 156

Query: 129 ----NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMV 184
                 +  + L++      M      V+ Q+    + P L     ++N L K       
Sbjct: 157 LFGFTLYSFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEA 216

Query: 185 WKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIAL 244
             V+ K+ Q  +  +   Y  LI   C++  +DK  ++   M       +  TY+TLI  
Sbjct: 217 VLVFNKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLING 276

Query: 245 YCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPN 302
            C +G   EA+ + + M  +GI P + TY   I   C  GR+ +A  L R +  KG +P+
Sbjct: 277 LCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPS 336

Query: 303 HVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGR--------- 353
             TYT +I G  RA  +E A+ +   M  +G+ P  VTYN+++ +LC EGR         
Sbjct: 337 VQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFD 396

Query: 354 --------------------------IRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
                                     I  A  + N+M +   +P  VT NTLI    K G
Sbjct: 397 WMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRG 456

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
              +A +    M E+    D+ TY  LI GFCK  ++D A    + ML  G SP+  +Y+
Sbjct: 457 YLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYT 516

Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGN 507
            ++DGYC +   +  L L +     G    +  Y A+I    K  +   A++    M   
Sbjct: 517 AMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQ 576

Query: 508 GILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
           G+  +++ YTSL     +         I  +M ++  +     Y S      ++ ++
Sbjct: 577 GLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKV 633



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 114/436 (26%), Positives = 183/436 (41%), Gaps = 33/436 (7%)

Query: 149 GLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIH 208
            + ++ +M    L+P+      L+N L  +    +  K++  M   G +AN   YN +I 
Sbjct: 356 AIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIK 415

Query: 209 ACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISP 268
                 D++K   +  +M        + TYNTLI    K+G    A      M+     P
Sbjct: 416 GLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEP 475

Query: 269 DIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLR 326
           D  TY  LI GFC+ G++  A   F ++   G +PN  TYT +IDGYC+   ++ AL L 
Sbjct: 476 DERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLF 535

Query: 327 EVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKI 386
           E M   G    + TYN+I+  L K  R  +A +   +M E+ + P+ +T  +LIN  CK 
Sbjct: 536 ERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKN 595

Query: 387 GDTASAMKV------KN-------------------------RMLEAGLMLDQFTYKALI 415
             T  A K+      KN                         R+ E G      TY  L+
Sbjct: 596 TATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAAERLTENGCEPTIDTYSTLV 655

Query: 416 HGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLC 475
            G C+    + A +L+  M + G SPS   Y  L+  +C     +  L++ +    +G  
Sbjct: 656 SGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQ 715

Query: 476 VDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDI 535
             + +Y+ LI   C   + + A  +F  +       D +++T L     + G+   C   
Sbjct: 716 PHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDSDLCMKF 775

Query: 536 LDDMYRRRLMITLKIY 551
           L  M  R    +L  Y
Sbjct: 776 LYLMESRNCTPSLHTY 791



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 109/420 (25%), Positives = 181/420 (43%), Gaps = 18/420 (4%)

Query: 78  LQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLV 137
           ++ H T+ +  T N+  K          + D      V N ++K    P     V+++  
Sbjct: 398 MEGHGTLANAQTYNQIIKGL------FGMDDIEKAMVVFNKMLKDGPSPT----VVTYNT 447

Query: 138 IFYANLKMT--QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           +   NLK     +  +    M+  N  P       L++   K    D     + +M++ G
Sbjct: 448 LIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCG 507

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
           +  N   Y  +I   CK   +D    L   ME     A + TYN +I+   K     EA 
Sbjct: 508 ISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAE 567

Query: 256 AVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGY 313
               +M  +G+ P+ +TY SLI+G C+      A ++F ++  K   PN  TYT+LI G 
Sbjct: 568 KFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGL 627

Query: 314 CRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDN 373
           C+   ++ A RL E     G  P + TY++++  LC+EGR  +A++L+  M EK ++P  
Sbjct: 628 CQEGKVDAAERLTE----NGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSM 683

Query: 374 VTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFG 433
               +L+ A+CK      A+++ N M   G     F YK LI   C     + A  +   
Sbjct: 684 EIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQS 743

Query: 434 MLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEK 493
           +L   ++     ++ LVDG   + + +  +K L    SR     +  Y  L R   K  K
Sbjct: 744 LLKKQWNSDLIVWTVLVDGLLQEGDSDLCMKFLYLMESRNCTPSLHTYIILARELSKVGK 803



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 117/473 (24%), Positives = 199/473 (42%), Gaps = 26/473 (5%)

Query: 77  SLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALV-------------KIH 123
           S+Q++  +I  L +    + A  M  K+     +      NAL+             KI 
Sbjct: 336 SVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIF 395

Query: 124 DDPDG-----NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHAC-TVLLNSLAK 177
           D  +G     N+   + ++     +   +  + VF++M      P +    T+++ +L +
Sbjct: 396 DWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKR 455

Query: 178 DRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFT 237
             L +    +Y  M +     +   Y  LI   CK   +D       EM    +  + +T
Sbjct: 456 GYLNNATRFLYM-MKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWT 514

Query: 238 YNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI- 296
           Y  +I  YCK+G    AL++ +RME  G S  I TYN++I G  +  R  EA +    + 
Sbjct: 515 YTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMT 574

Query: 297 -KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIR 355
            +G  PN +TYT+LI+G C+      A ++   M  K   P   TY S++  LC+EG++ 
Sbjct: 575 EQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVD 634

Query: 356 DANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALI 415
            A RL     E    P   T +TL++  C+ G +  A ++   M E GL      Y +L+
Sbjct: 635 AAERL----TENGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLL 690

Query: 416 HGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLC 475
              CK+ ++D A E+   M   GF P    Y  L+   C  +  E  L +    + +   
Sbjct: 691 VAHCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWN 750

Query: 476 VDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
            D+ V+  L+    ++   D   +   LM+          Y  LA    + G+
Sbjct: 751 SDLIVWTVLVDGLLQEGDSDLCMKFLYLMESRNCTPSLHTYIILARELSKVGK 803



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 71/266 (26%), Positives = 122/266 (45%), Gaps = 23/266 (8%)

Query: 144 KMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLY 203
           KMT+ GLQ           P+    T L+N L K+  T++ +K++ +M +   + N H Y
Sbjct: 572 KMTEQGLQ-----------PNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTY 620

Query: 204 NVLIHACCKSSDVDKVEKLL---CEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDR 260
             LI+  C+   VD  E+L    CE         + TY+TL++  C++G   EA  + + 
Sbjct: 621 TSLIYGLCQEGKVDAAERLTENGCE-------PTIDTYSTLVSGLCREGRSNEASQLVEN 673

Query: 261 MEREGISPDIVTYNSLIHGFCREGRMREARRLFR--DIKGATPNHVTYTTLIDGYCRAND 318
           M+ +G+SP +  Y SL+   C+  ++  A  +F    +KG  P+   Y  LI   C  + 
Sbjct: 674 MKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLICALCGVSR 733

Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT 378
            EEAL + + +  K     ++ +  ++  L +EG      + L  M  +   P   T   
Sbjct: 734 AEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDSDLCMKFLYLMESRNCTPSLHTYII 793

Query: 379 LINAYCKIGDTASAMKVKNRMLEAGL 404
           L     K+G +    ++ NR+ E  L
Sbjct: 794 LARELSKVGKSIGTDQIGNRLREVSL 819


>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
 gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
          Length = 862

 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 126/482 (26%), Positives = 228/482 (47%), Gaps = 20/482 (4%)

Query: 75  KHSLQSHWTMIHILTKNKHFKSA----QNMLEKIALRDFLSTPSVLNALVKIH--DDPDG 128
           K  + ++ T+I  L K +    A    Q+M++K    D ++  ++++ L K    D  DG
Sbjct: 266 KPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADG 325

Query: 129 ------------NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLA 176
                       +    + L+  Y +    ++ ++  ++M    L P +   ++LL+ L 
Sbjct: 326 VLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLC 385

Query: 177 KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLF 236
           K+       K++  M++ G+  N+ +Y +L+H       +  +  LL  M    +  + +
Sbjct: 386 KNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNY 445

Query: 237 TYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI 296
            +N ++  Y KK M  EA+ +  RM + G+SPD+VTY  LI   C+ GR+ +A   F  +
Sbjct: 446 IFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQM 505

Query: 297 --KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRI 354
              G TPN V + +L+ G C  +  E+A  L   M  +GV P VV +N+I+  LC EG++
Sbjct: 506 INDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQV 565

Query: 355 RDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKAL 414
             A RL++ M    + P+ ++ NTLI  +C  G T  A ++ + M+  GL  D  +Y  L
Sbjct: 566 MVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTL 625

Query: 415 IHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGL 474
           + G+CK   +D A  L   ML  G +P   +YS ++ G  +        +L    +  G 
Sbjct: 626 LRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQ 685

Query: 475 CVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSD 534
             D+  Y  ++   CK   VD A ++F  +    +  + + +T +    ++ G  K   D
Sbjct: 686 QWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMD 745

Query: 535 IL 536
           + 
Sbjct: 746 LF 747



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 127/484 (26%), Positives = 221/484 (45%), Gaps = 31/484 (6%)

Query: 67  AESAVPNYKHSLQSHWTMIHILTKNKHFKSA----QNMLEKIALRDFLSTPSVLNALVKI 122
           AE    N   ++ ++ T+I  L K +    A    Q+M++K    D ++  ++++ L K 
Sbjct: 188 AEDGGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKA 247

Query: 123 H--DDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRL 180
              D  +G                       V   M    + P +     +++ L K + 
Sbjct: 248 QAVDRAEG-----------------------VLQHMIDKGVKPDVVTYNTIIDGLCKAQA 284

Query: 181 TDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNT 240
            D    V + M+  GV  ++  YN +I   CK+  VD+ + +L  M  KDV+ D+ TYN 
Sbjct: 285 VDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNC 344

Query: 241 LIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KG 298
           LI  Y   G   E +   + M   G+ PD+VTY+ L+   C+ G+  EAR++F  +  KG
Sbjct: 345 LIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKG 404

Query: 299 ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDAN 358
             PN   Y  L+ GY     + +   L ++M A G+ P    +N +L    K+  I +A 
Sbjct: 405 IKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAM 464

Query: 359 RLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGF 418
            + + M++  ++PD VT   LI+A CK+G    A+   N+M+  G+  +   + +L++G 
Sbjct: 465 HIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGL 524

Query: 419 CKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDV 478
           C     + A+EL F M D G  P+   ++ ++   CN+       +L+D     G+  +V
Sbjct: 525 CTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNV 584

Query: 479 SVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDD 538
             Y  LI   C   + D A +L ++M   G+  D + Y +L   Y + G       +  +
Sbjct: 585 ISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFRE 644

Query: 539 MYRR 542
           M R+
Sbjct: 645 MLRK 648



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 121/398 (30%), Positives = 187/398 (46%), Gaps = 2/398 (0%)

Query: 169 TVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEF 228
           + +++ L K +  D    V + M+  GV  ++  YN +I   CK+  VD+ E +L  M  
Sbjct: 238 STIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMID 297

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
           K V+ D+ TYNT+I   CK      A  V   M  + + PDI TYN LIHG+   G  +E
Sbjct: 298 KGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKE 357

Query: 289 ARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILR 346
             R   ++  +G  P+ VTY+ L+D  C+     EA ++   M  KG+ P V  Y  +L 
Sbjct: 358 VVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLH 417

Query: 347 KLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLML 406
                G I D   LL+ M    I+P+N   N ++ AY K      AM + +RM + GL  
Sbjct: 418 GYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSP 477

Query: 407 DQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLL 466
           D  TY  LI   CK   +D A      M++ G +P+   ++ LV G C  +  E   +L 
Sbjct: 478 DVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELF 537

Query: 467 DEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRA 526
            E   +G+  +V  +  ++   C + +V  AQRL + M+  G+  + + Y +L   +  A
Sbjct: 538 FEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLA 597

Query: 527 GEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
           G     + +LD M    L   L  Y +    Y K   I
Sbjct: 598 GRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRI 635



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 117/400 (29%), Positives = 193/400 (48%), Gaps = 6/400 (1%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVF-DQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKV 187
           N  V++ L+    + K   + + +   +M     MP++ +C  LL  L  ++  +   ++
Sbjct: 124 NEVVINQLLNGLCDAKRVDEAMDILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALEL 183

Query: 188 YKKMVQLG---VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIAL 244
              M + G      N+  YN +I   CK+  VD+ E +L  M  K V+ D+ TY+T+I  
Sbjct: 184 LHTMAEDGGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDG 243

Query: 245 YCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPN 302
            CK      A  V   M  +G+ PD+VTYN++I G C+   +  A  + + +  KG  P+
Sbjct: 244 LCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPD 303

Query: 303 HVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLN 362
            VTY T+IDG C+A  ++ A  + + M  K V P + TYN ++      G  ++  R L 
Sbjct: 304 VVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLE 363

Query: 363 EMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAK 422
           EM  + + PD VT + L++  CK G    A K+   M+  G+  +   Y  L+HG+    
Sbjct: 364 EMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARG 423

Query: 423 EMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYR 482
            +    +LL  M+  G SP+   ++ ++  Y  K   +  + +       GL  DV  Y 
Sbjct: 424 AIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYG 483

Query: 483 ALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYA 522
            LI   CK  +VD A   FN M  +G+  +SV++ SL Y 
Sbjct: 484 ILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYG 523



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 132/446 (29%), Positives = 212/446 (47%), Gaps = 16/446 (3%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDR---LTDMVWKVYKKMVQL---GVVANIH 201
           D L++FD++  H     + A   LLN +A+ R    +++   ++ +M +     V  ++ 
Sbjct: 32  DALKLFDELLPHARPASVRAFNHLLNVVARARCSSTSELAVSLFNRMARACSNKVRPDLC 91

Query: 202 LYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQ-DR 260
            Y++L    C+   ++        +     R +    N L+   C      EA+ +   R
Sbjct: 92  TYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAMDILLRR 151

Query: 261 MEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK-----GATPNHVTYTTLIDGYCR 315
           M   G  P++V+ N+L+ G C E R+ EA  L   +        TPN VTY T+IDG C+
Sbjct: 152 MPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLCK 211

Query: 316 ANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVT 375
           A  ++ A  + + M  KGV   VVTY++I+  LCK   +  A  +L  M +K + PD VT
Sbjct: 212 AQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVT 271

Query: 376 CNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGML 435
            NT+I+  CK      A  V   M++ G+  D  TY  +I G CKA+ +D A  +L  M+
Sbjct: 272 YNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMI 331

Query: 436 DAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVD 495
           D    P   +Y+ L+ GY +    + +++ L+E  +RGL  DV  Y  L+   CK  K  
Sbjct: 332 DKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCT 391

Query: 496 YAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFS 555
            A+++F  M   GI  +  IY  L + Y   G     +D+LD M    +     I+    
Sbjct: 392 EARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVL 451

Query: 556 ASYAKDNEILDLFWSHVVDRGLMSKH 581
            +YAK   I +    H+  R  MS+H
Sbjct: 452 CAYAKKAMIDEAM--HIFSR--MSQH 473



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 109/363 (30%), Positives = 177/363 (48%), Gaps = 6/363 (1%)

Query: 171 LLNSLAKDRLTDMVWKVY-KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLL---CEM 226
           LLN L   +  D    +  ++M + G + N+   N L+   C    V++  +LL    E 
Sbjct: 131 LLNGLCDAKRVDEAMDILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAED 190

Query: 227 EFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRM 286
              +   ++ TYNT+I   CK      A  V   M  +G+  D+VTY+++I G C+   +
Sbjct: 191 GGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAV 250

Query: 287 REARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSI 344
             A  + + +  KG  P+ VTY T+IDG C+A  ++ A  + + M  KGV P VVTYN+I
Sbjct: 251 DRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTI 310

Query: 345 LRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGL 404
           +  LCK   +  A+ +L  M +K + PD  T N LI+ Y   G+    ++    M   GL
Sbjct: 311 IDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGL 370

Query: 405 MLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLK 464
             D  TY  L+   CK  +   A+++ + M+  G  P+   Y  L+ GY  +     L  
Sbjct: 371 DPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTD 430

Query: 465 LLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYW 524
           LLD  V+ G+  +  ++  ++  + KK  +D A  +F+ M  +G+  D V Y  L  A  
Sbjct: 431 LLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALC 490

Query: 525 RAG 527
           + G
Sbjct: 491 KLG 493



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 116/476 (24%), Positives = 221/476 (46%), Gaps = 20/476 (4%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALR----DFLSTPSVLNALVK------- 121
           + K  +Q++  +IH       +K     LE++  R    D ++   +L+ L K       
Sbjct: 334 DVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEA 393

Query: 122 -------IHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNS 174
                  I      N  +   L+  YA      D   + D M  + + P+ +   ++L +
Sbjct: 394 RKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCA 453

Query: 175 LAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRAD 234
            AK  + D    ++ +M Q G+  ++  Y +LI A CK   VD       +M    V  +
Sbjct: 454 YAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPN 513

Query: 235 LFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR 294
              +N+L+   C      +A  +   M  +G+ P++V +N+++   C EG++  A+RL  
Sbjct: 514 SVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLID 573

Query: 295 DIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEG 352
            ++  G  PN ++Y TLI G+C A   +EA +L +VM + G+ P +++Y+++LR  CK G
Sbjct: 574 SMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTG 633

Query: 353 RIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYK 412
           RI +A  L  EM  K + P  VT +T++         + A ++   M+++G   D +TY 
Sbjct: 634 RIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYN 693

Query: 413 ALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSR 472
            +++G CK   +D A ++   +      P+  +++ ++D       ++  + L     S 
Sbjct: 694 IILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSH 753

Query: 473 GLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
           GL  +V  Y  +++   ++  +D    LF  M+ +G   DSV+  ++  +    GE
Sbjct: 754 GLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRSLLGRGE 809



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 83/346 (23%), Positives = 154/346 (44%), Gaps = 37/346 (10%)

Query: 122 IHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLT 181
           I+D    NS V + LV     +   +   ++F +M    + P++     ++ +L  +   
Sbjct: 506 INDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQV 565

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
            +  ++   M ++GV  N+  YN LI   C +   D+  +LL  M    ++ DL +Y+TL
Sbjct: 566 MVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTL 625

Query: 242 IALYCKKGMHYEALAVQDRMEREGISP--------------------------------- 268
           +  YCK G    A  +   M R+G++P                                 
Sbjct: 626 LRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQ 685

Query: 269 --DIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
             DI TYN +++G C+   + EA ++F+ +  K   PN +T+T +ID   +    ++A+ 
Sbjct: 686 QWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMD 745

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           L   + + G+ P VVTY  +++ + +EG + + + L   M +    PD+V  N +I +  
Sbjct: 746 LFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRSLL 805

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL 430
             G+   A    +++ E    L+  T   LI  F + +  + AK L
Sbjct: 806 GRGEIMRAGAYLSKIDEMNFSLEASTTSLLISLFSREEYKNHAKSL 851


>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 917

 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 119/451 (26%), Positives = 211/451 (46%), Gaps = 49/451 (10%)

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
           P L + +++++ L KDR  D   +++++M   G++ ++  Y  LIH  C S   +K + L
Sbjct: 456 PTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCL 515

Query: 223 LCEMEFKDVRADLFTYNTLIALYCKKGMHYEA-----LAVQD------------------ 259
             EM    ++ D+ T + LI + CKKG   EA     + +Q                   
Sbjct: 516 FNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCM 575

Query: 260 ------------RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGAT------- 300
                       +M++ G  P++VT  +L+ G C+ G ++ A  L +++   T       
Sbjct: 576 KHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINC 635

Query: 301 -PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
            PN ++Y+ +IDG C+    +EA  L + M A GV P V++Y S++   C+ G+ +DA  
Sbjct: 636 KPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKY 695

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
           L NEM +  + PD  T + LI+  CK G    A ++   M++ G + +  TY  L+ G C
Sbjct: 696 LFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLC 755

Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS------RG 473
               +  A +L   M   G  P   +Y  L+ G C   N +  L+L  + +S        
Sbjct: 756 MNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTN 815

Query: 474 LCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACS 533
              DV  Y  +I   CK  + D A+ LF  M+  G++ + + YTSL + + R+G+ +   
Sbjct: 816 FKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAK 875

Query: 534 DILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
            + ++M  + + +    Y      + K+ +I
Sbjct: 876 HLFNEMVDQGVQLNAVTYSVMIHGFCKEGQI 906



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 136/442 (30%), Positives = 212/442 (47%), Gaps = 35/442 (7%)

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
           P L + +++++ L KDR  D   +++K+M   G++ ++  Y  LIH  C S   +K + L
Sbjct: 163 PTLISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCL 222

Query: 223 LCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR 282
             EM    ++ D+ T   LI ++CK+G   EA  + + M   G   DIVTY++LI G C 
Sbjct: 223 FNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCM 282

Query: 283 EGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVM-------AAKG 333
           + R+ EA +LF  +K  G  P+ + Y TL+ G C+   +  AL L + M         K 
Sbjct: 283 KHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKC 342

Query: 334 VYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAM 393
           + P V T + ++  LCKEG++ +AN LL  M ++    D VT +TLI   C     + A 
Sbjct: 343 IRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEAT 402

Query: 394 KVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGML-DAG-----FSPSYCSYS 447
            +   M + G   D  TY  L+ G C+   ++IA +L   ML D G       P+  SYS
Sbjct: 403 WLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYS 462

Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGN 507
            ++DG C    E+   +L +E  ++G+  DV  Y  LI  FC   K + A+ LFN M   
Sbjct: 463 IIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDV 522

Query: 508 GILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDL 567
           GI  D    + L     + G+    + +L+ + +R                     ILD+
Sbjct: 523 GIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGC-------------------ILDV 563

Query: 568 FWSHVVDRGLMSKH-IFKEMQL 588
                + +GL  KH I K  QL
Sbjct: 564 VTCTTLVKGLCMKHRISKATQL 585



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 109/356 (30%), Positives = 178/356 (50%), Gaps = 18/356 (5%)

Query: 167 ACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEM 226
            CT L+  L          +++ KM +LG + N+     L+   C+S ++ K+   L + 
Sbjct: 565 TCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNI-KIALELHKN 623

Query: 227 EFKDV-------RADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHG 279
              D        + +  +Y+ +I   CK G   EA  +   M+  G+ PD+++Y SLIHG
Sbjct: 624 MLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHG 683

Query: 280 FCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPG 337
           FCR G+ ++A+ LF ++   G  P+  T++ LID  C+   + EA  L EVM  +G  P 
Sbjct: 684 FCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPN 743

Query: 338 VVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKN 397
            VTY ++++ LC   RI +A +L  +M +    PD VT  TL+   C+ G+  +A+++  
Sbjct: 744 TVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHK 803

Query: 398 RMLE------AGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVD 451
           +ML            D  +Y  +I G CK    D A+EL   M   G  P+  SY+ L+ 
Sbjct: 804 KMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIH 863

Query: 452 GYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGN 507
           G+C     E    L +E V +G+ ++   Y  +I  FCK+ ++D A  LF  M+ N
Sbjct: 864 GFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKA--LFQKMEAN 917



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 117/430 (27%), Positives = 191/430 (44%), Gaps = 50/430 (11%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           ++F +M+   +MP + + T L++        +    ++ +M+ +G+  ++    VLI   
Sbjct: 186 ELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMF 245

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           CK   V +  +LL  M  +    D+ TY+TLI   C K    EA  +   M++ G  PD 
Sbjct: 246 CKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDA 305

Query: 271 VTYNSLIHGFCREGRMREARRLFRD---------IKGATPNHVTYTTLIDGYCRANDLEE 321
           + Y +L+ G C+ G++  A  L ++         IK   P+  T + LID  C+   + E
Sbjct: 306 IAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIE 365

Query: 322 ALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
           A  L EVM  +G    +VTY+++++ LC E RI +A  L   M +    PD +T  TL+ 
Sbjct: 366 ANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMK 425

Query: 382 AYCKIGDTASAMKVKNRMLE---------------------------------------- 401
             C+ G+   A+++   ML                                         
Sbjct: 426 GLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMK 485

Query: 402 -AGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEE 460
             G+M D  +Y  LIHGFC + + + AK L   MLD G  P   + S L+D  C K    
Sbjct: 486 AQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVI 545

Query: 461 ALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLA 520
              KLL+  + RG  +DV     L++  C K ++  A +LF  MQ  G + + V   +L 
Sbjct: 546 EANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLM 605

Query: 521 YAYWRAGEPK 530
               ++G  K
Sbjct: 606 KGLCQSGNIK 615



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 159/286 (55%), Gaps = 11/286 (3%)

Query: 160 NLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKV 219
           N  P+  + +++++ L K    D   +++K+M  LGV+ ++  Y  LIH  C+S      
Sbjct: 634 NCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDA 693

Query: 220 EKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHG 279
           + L  EM    V+ D+ T++ LI + CK+G   EA  + + M + G  P+ VTY +L+ G
Sbjct: 694 KYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKG 753

Query: 280 FCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRL-REVMAAKGVY- 335
            C   R+ EA +LF  ++  G  P+ VTY TL+ G C+  +++ AL L +++++  G Y 
Sbjct: 754 LCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYG 813

Query: 336 ----PGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTAS 391
               P V++Y+ I+  LCK GR  +A  L  EM    + P+ ++  +LI+ +C+ G    
Sbjct: 814 TNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLED 873

Query: 392 AMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA 437
           A  + N M++ G+ L+  TY  +IHGFCK  ++D A   LF  ++A
Sbjct: 874 AKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKA---LFQKMEA 916



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 114/413 (27%), Positives = 198/413 (47%), Gaps = 21/413 (5%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMV----QLGVVA---NI 200
           +  Q+F  M+     P   A   L+  L +    ++   ++++M+    Q G+     ++
Sbjct: 288 EATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDV 347

Query: 201 HLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDR 260
              ++LI   CK   V +  +LL  M  +    D+ TY+TLI   C +    EA  +   
Sbjct: 348 TTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMS 407

Query: 261 MEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGAT--------PNHVTYTTLIDG 312
           M++ G  PD +TY +L+ G C+ G +  A +L +++   T        P  ++Y+ +IDG
Sbjct: 408 MQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDG 467

Query: 313 YCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPD 372
            C+    +EA  L E M A+G+ P V++Y +++   C  G+   A  L NEM +  I PD
Sbjct: 468 LCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPD 527

Query: 373 NVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLF 432
             T + LI+  CK G    A K+   +++ G +LD  T   L+ G C    +  A +L  
Sbjct: 528 VTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFL 587

Query: 433 GMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKL----LDEFVSRGL-CVDVSV-YRALIR 486
            M   G  P+  + + L+ G C   N +  L+L    L +    G+ C   ++ Y  +I 
Sbjct: 588 KMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIID 647

Query: 487 RFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
             CK  + D A+ LF  M+  G++ D + YTSL + + R+G+ K    + ++M
Sbjct: 648 GLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEM 700



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 113/388 (29%), Positives = 178/388 (45%), Gaps = 24/388 (6%)

Query: 156 MRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNV---------L 206
           MR+  L P      +L+N L   +  +        +++ G + +I  Y++         L
Sbjct: 1   MRLAGLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSML 60

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           I   CK   V +  +LL  M  +    D+ TY+TLI   C +    EA  +   M++ G 
Sbjct: 61  IDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGC 120

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDIKGAT--------PNHVTYTTLIDGYCRAND 318
            PD +TY +L+ G C+ G +  A +L +++   T        P  ++Y+ +IDG C+   
Sbjct: 121 RPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRR 180

Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT 378
            +EA  L + M A+G+ P V++Y S++   C  G+   A  L NEM +  I PD  T   
Sbjct: 181 EDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGV 240

Query: 379 LINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAG 438
           LI+ +CK G    A ++   M+  G +LD  TY  LI G C    +  A +L   M   G
Sbjct: 241 LIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLG 300

Query: 439 FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSR----GL-CV--DVSVYRALIRRFCKK 491
             P   +Y  L+ G C        L L  E ++     G+ C+  DV+    LI   CK+
Sbjct: 301 CRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKE 360

Query: 492 EKVDYAQRLFNLMQGNGILGDSVIYTSL 519
            KV  A  L  +M   G + D V Y++L
Sbjct: 361 GKVIEANELLEVMIQRGCILDIVTYSTL 388



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 101/320 (31%), Positives = 153/320 (47%), Gaps = 17/320 (5%)

Query: 226 MEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYN---------SL 276
           M    +  D FT+N LI   C      E LA    + R G  PDIVTY+          L
Sbjct: 1   MRLAGLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSML 60

Query: 277 IHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGV 334
           I   C+EG++ EA  L   +  +G   + VTY+TLI G C  + + EA  L   M   G 
Sbjct: 61  IDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGC 120

Query: 335 YPGVVTYNSILRKLCKEGRIRDANRLLNEM-NEK-----KIAPDNVTCNTLINAYCKIGD 388
            P  +TY ++++ LC+ G I  A +L  EM N+      K  P  ++ + +I+  CK   
Sbjct: 121 RPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRR 180

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
              A ++   M   G+M D  +Y +LIHGFC + + + AK L   MLD G  P   +   
Sbjct: 181 EDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGV 240

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG 508
           L+D +C +       +LL+  V RG  +D+  Y  LI+  C K ++  A +LF  M+  G
Sbjct: 241 LIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLG 300

Query: 509 ILGDSVIYTSLAYAYWRAGE 528
              D++ Y +L     + G+
Sbjct: 301 CRPDAIAYGTLMKGLCQTGK 320



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 86/302 (28%), Positives = 133/302 (44%), Gaps = 34/302 (11%)

Query: 261 MEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRAND 318
           M   G+ PD  T+N LI+  C   R+ E       I  +G  P+ VTY+           
Sbjct: 1   MRLAGLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYS----------- 49

Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT 378
                          + P V T + ++  LCKEG++ +AN LL  M ++    D VT +T
Sbjct: 50  ---------------IRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYST 94

Query: 379 LINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGML-DA 437
           LI   C     + A  +   M + G   D  TY  L+ G C+   ++IA +L   ML D 
Sbjct: 95  LIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDT 154

Query: 438 G-----FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKE 492
           G       P+  SYS ++DG C    E+   +L  E  ++G+  DV  Y +LI  FC   
Sbjct: 155 GRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSG 214

Query: 493 KVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYR 552
           K + A+ LFN M   GI  D      L   + + G+    +++L+ M  R  ++ +  Y 
Sbjct: 215 KWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYS 274

Query: 553 SF 554
           + 
Sbjct: 275 TL 276



 Score = 38.9 bits (89), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 18/68 (26%), Positives = 37/68 (54%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           ++F +M+   ++P++ + T L++   +    +    ++ +MV  GV  N   Y+V+IH  
Sbjct: 841 ELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGF 900

Query: 211 CKSSDVDK 218
           CK   +DK
Sbjct: 901 CKEGQIDK 908


>gi|414591144|tpg|DAA41715.1| TPA: hypothetical protein ZEAMMB73_506058 [Zea mays]
          Length = 521

 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 107/359 (29%), Positives = 176/359 (49%), Gaps = 21/359 (5%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D  ++ D M  H +  +      LL+   + +    V ++ + M   G+ A +  Y +L+
Sbjct: 149 DARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMENEGIEATVGTYTILV 208

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
            +   + D+ KVE L  EM+  +V  D++ Y  +I  YC+ G    A  V D     G+ 
Sbjct: 209 DSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRRAAKVLDECVGNGVE 268

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDIKGATP--NHVTYTTLIDGYCRANDLEEALRL 325
           P+  TY  LI GFC+ G+M  A  L  D++G     N + + T+IDGYCR   +++AL++
Sbjct: 269 PNERTYGVLIKGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKI 328

Query: 326 REVMAA-------------------KGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
           +  M                      GV P  VTY +++   CK+G + +A RL  EM E
Sbjct: 329 KAAMEKIGVELNIYTYNTLACGLCRMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAE 388

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
           K   P  +T + +I+ Y K G    A + +  M + G + D +TY +L+HG C   ++D+
Sbjct: 389 KGATPSVLTYSVMIHGYAKKGRIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDV 448

Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
           A +L   M   G  P+  +Y+ L+ G   +   EA  +L D+ +  GL  D S+Y AL+
Sbjct: 449 ALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALV 507



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 105/309 (33%), Positives = 158/309 (51%), Gaps = 14/309 (4%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           +F++M+ +N++  ++  T ++N+  +        KV  + V  GV  N   Y VLI   C
Sbjct: 223 LFNEMKANNVVGDVYLYTAVINAYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLIKGFC 282

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           K   ++  E LL +M+ + V  +   +NT+I  YC+KGM  +AL ++  ME+ G+  +I 
Sbjct: 283 KIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKIGVELNIY 342

Query: 272 TYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAA 331
           TYN+L  G CR               G  PN+VTYTTLI  +C+  D+ EA RL   MA 
Sbjct: 343 TYNTLACGLCR--------------MGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAE 388

Query: 332 KGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTAS 391
           KG  P V+TY+ ++    K+GRIR+A R   EM +K   PD  T  +L++ +C  G    
Sbjct: 389 KGATPSVLTYSVMIHGYAKKGRIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDV 448

Query: 392 AMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVD 451
           A+K+   M + G   +   Y ALI G  K    + A +L   ML AG  P    YS LV 
Sbjct: 449 ALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALVG 508

Query: 452 GYCNKNNEE 460
                N ++
Sbjct: 509 SLHTDNRKD 517



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 106/383 (27%), Positives = 173/383 (45%), Gaps = 27/383 (7%)

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER 263
           +V++   CKS  VD   +LL +M    V  +   YN+L+  Y ++        + + ME 
Sbjct: 135 SVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMEN 194

Query: 264 EGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGATPNHVT-----YTTLIDGYCRAND 318
           EGI   + TY  L+        + +   LF ++K    N+V      YT +I+ YCRA +
Sbjct: 195 EGIEATVGTYTILVDSLSTARDISKVEALFNEMKA---NNVVGDVYLYTAVINAYCRAGN 251

Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT 378
           +  A ++ +     GV P   TY  +++  CK G++  A  LL +M  + +  + +  NT
Sbjct: 252 MRRAAKVLDECVGNGVEPNERTYGVLIKGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNT 311

Query: 379 LINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC------------------- 419
           +I+ YC+ G    A+K+K  M + G+ L+ +TY  L  G C                   
Sbjct: 312 MIDGYCRKGMVDDALKIKAAMEKIGVELNIYTYNTLACGLCRMGVVPNYVTYTTLISIHC 371

Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
           K  +M  A+ L   M + G +PS  +YS ++ GY  K       +   E   +G   DV 
Sbjct: 372 KDGDMVEARRLFREMAEKGATPSVLTYSVMIHGYAKKGRIREAERFRKEMEKKGFVPDVY 431

Query: 480 VYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
            Y +L+   C   KVD A +LF  M+  G   + V YT+L     + G  +A   + DDM
Sbjct: 432 TYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDM 491

Query: 540 YRRRLMITLKIYRSFSASYAKDN 562
            +  L+    +Y +   S   DN
Sbjct: 492 LKAGLIPDDSLYSALVGSLHTDN 514



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 89/290 (30%), Positives = 143/290 (49%), Gaps = 18/290 (6%)

Query: 128 GNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKV 187
           G+ ++ + ++  Y      +   +V D+   + + P+     VL+    K    +    +
Sbjct: 234 GDVYLYTAVINAYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLIKGFCKIGQMEAAEML 293

Query: 188 YKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCK 247
              M   GV  N  ++N +I   C+   VD   K+   ME   V  +++TYNTL    C 
Sbjct: 294 LADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKIGVELNIYTYNTLACGLC- 352

Query: 248 KGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVT 305
                          R G+ P+ VTY +LI   C++G M EARRLFR++  KGATP+ +T
Sbjct: 353 ---------------RMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVLT 397

Query: 306 YTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMN 365
           Y+ +I GY +   + EA R R+ M  KG  P V TY S++   C  G++  A +L  EM 
Sbjct: 398 YSVMIHGYAKKGRIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMK 457

Query: 366 EKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALI 415
           ++   P+ V    LI+   K G + +A ++ + ML+AGL+ D   Y AL+
Sbjct: 458 QRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALV 507



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 88/338 (26%), Positives = 147/338 (43%), Gaps = 35/338 (10%)

Query: 276 LIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKG 333
           ++ G C+ GR+ +ARRL  D+   G + N + Y +L+D Y R  D      + E+M  +G
Sbjct: 137 VVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMENEG 196

Query: 334 VYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAM 393
           +   V TY  ++  L     I     L NEM    +  D      +INAYC+ G+   A 
Sbjct: 197 IEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRRAA 256

Query: 394 KVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGY 453
           KV +  +  G+  ++ TY  LI GFCK  +M+ A+ LL  M   G   +   ++ ++DGY
Sbjct: 257 KVLDECVGNGVEPNERTYGVLIKGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGY 316

Query: 454 CNKNNEEALLKLLDEF--------------VSRGLC-----VDVSVYRALIRRFCKKEKV 494
           C K   +  LK+                  ++ GLC      +   Y  LI   CK   +
Sbjct: 317 CRKGMVDDALKIKAAMEKIGVELNIYTYNTLACGLCRMGVVPNYVTYTTLISIHCKDGDM 376

Query: 495 DYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSF 554
             A+RLF  M   G     + Y+ + + Y + G  +       +M ++  +  +  Y S 
Sbjct: 377 VEARRLFREMAEKGATPSVLTYSVMIHGYAKKGRIREAERFRKEMEKKGFVPDVYTYAS- 435

Query: 555 SASYAKDNEILDLFWSHVVDRGL-MSKHIFKEMQLRNS 591
                       L   H V+  + ++  +F+EM+ R +
Sbjct: 436 ------------LVHGHCVNGKVDVALKLFEEMKQRGT 461



 Score = 88.6 bits (218), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 64/252 (25%), Positives = 121/252 (48%), Gaps = 9/252 (3%)

Query: 282 REGRMREARRLFRDIKGATPNHVT---YTTLIDGYCRANDLEEALRLREVMAAKGVYPGV 338
           R GR+ +A  L     G+ P  V+    + ++DG C++  +++A RL + M   GV    
Sbjct: 107 RAGRLADAAGLLERALGSCPGSVSPFAASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNA 166

Query: 339 VTYNSILRKLCKE---GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKV 395
           + YNS+L    ++   GR+++   +L  M  + I     T   L+++     D +    +
Sbjct: 167 LCYNSLLDCYVRQKDDGRVQE---ILEIMENEGIEATVGTYTILVDSLSTARDISKVEAL 223

Query: 396 KNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCN 455
            N M    ++ D + Y A+I+ +C+A  M  A ++L   +  G  P+  +Y  L+ G+C 
Sbjct: 224 FNEMKANNVVGDVYLYTAVINAYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLIKGFCK 283

Query: 456 KNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVI 515
               EA   LL +   +G+ ++  ++  +I  +C+K  VD A ++   M+  G+  +   
Sbjct: 284 IGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKIGVELNIYT 343

Query: 516 YTSLAYAYWRAG 527
           Y +LA    R G
Sbjct: 344 YNTLACGLCRMG 355



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 67/133 (50%)

Query: 406 LDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKL 465
           +  F    ++ G CK+  +D A+ LL  M   G S +   Y+ L+D Y  + ++  + ++
Sbjct: 129 VSPFAASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEI 188

Query: 466 LDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWR 525
           L+   + G+   V  Y  L+        +   + LFN M+ N ++GD  +YT++  AY R
Sbjct: 189 LEIMENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCR 248

Query: 526 AGEPKACSDILDD 538
           AG  +  + +LD+
Sbjct: 249 AGNMRRAAKVLDE 261



 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 53/236 (22%), Positives = 109/236 (46%), Gaps = 11/236 (4%)

Query: 336 PGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIA--PDNVT---CNTLINAYCKIGDTA 390
           P  +T++  L  L + GR+ DA  LL    E+ +   P +V+    + +++  CK G   
Sbjct: 95  PRSLTFS--LLSLRRAGRLADAAGLL----ERALGSCPGSVSPFAASVVVDGLCKSGRVD 148

Query: 391 SAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLV 450
            A ++ + M   G+ L+   Y +L+  + + K+    +E+L  M + G   +  +Y+ LV
Sbjct: 149 DARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMENEGIEATVGTYTILV 208

Query: 451 DGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGIL 510
           D      +   +  L +E  +  +  DV +Y A+I  +C+   +  A ++ +   GNG+ 
Sbjct: 209 DSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRRAAKVLDECVGNGVE 268

Query: 511 GDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
            +   Y  L   + + G+ +A   +L DM  + + +   I+ +    Y +   + D
Sbjct: 269 PNERTYGVLIKGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDD 324


>gi|334186712|ref|NP_001190774.1| Pentatricopeptide repeat domain-containing protein [Arabidopsis
           thaliana]
 gi|223635614|sp|P0C8Q3.1|PP326_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g19890
 gi|332658842|gb|AEE84242.1| Pentatricopeptide repeat domain-containing protein [Arabidopsis
           thaliana]
          Length = 701

 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 122/427 (28%), Positives = 205/427 (48%), Gaps = 5/427 (1%)

Query: 126 PDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVW 185
           PD +S+ L  +VI        Q+  +    M     +P    CT++L +L ++ L +   
Sbjct: 215 PDSSSYKL--MVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAI 272

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
             ++KM+ LG   N+  +  LI   CK   + +  ++L EM     + +++T+  LI   
Sbjct: 273 WYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGL 332

Query: 246 CKKGMHYEALAVQDRMER-EGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPN 302
           CK+G   +A  +  ++ R +   P++ TY S+I G+C+E ++  A  LF  +K  G  PN
Sbjct: 333 CKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPN 392

Query: 303 HVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLN 362
             TYTTLI+G+C+A     A  L  +M  +G  P + TYN+ +  LCK+ R  +A  LLN
Sbjct: 393 VNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLN 452

Query: 363 EMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAK 422
           +     +  D VT   LI   CK  D   A+    RM + G   D      LI  FC+ K
Sbjct: 453 KAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQK 512

Query: 423 EMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYR 482
           +M  ++ L   ++  G  P+  +Y+ ++  YC + + +  LK        G   D   Y 
Sbjct: 513 KMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYG 572

Query: 483 ALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRR 542
           +LI   CKK  VD A +L+  M   G+    V   +LAY Y +  +      +L+ + ++
Sbjct: 573 SLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLDKK 632

Query: 543 RLMITLK 549
             + T++
Sbjct: 633 LWIRTVR 639



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 108/398 (27%), Positives = 189/398 (47%), Gaps = 6/398 (1%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVV-ANIHLYNV 205
           +   ++ ++M  +   P+++  T L++ L K   T+  ++++ K+V+      N+H Y  
Sbjct: 304 KQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTS 363

Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
           +I   CK   +++ E L   M+ + +  ++ TY TLI  +CK G    A  + + M  EG
Sbjct: 364 MIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEG 423

Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEAL 323
             P+I TYN+ I   C++ R  EA  L       G   + VTYT LI   C+ ND+ +AL
Sbjct: 424 FMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQAL 483

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
                M   G    +   N ++   C++ +++++ RL   +    + P   T  ++I+ Y
Sbjct: 484 AFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCY 543

Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY 443
           CK GD   A+K  + M   G + D FTY +LI G CK   +D A +L   M+D G SP  
Sbjct: 544 CKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPE 603

Query: 444 CSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNL 503
            +   L   YC +N+    + LL+    +   + +   R L+R+ C ++KV  A   F  
Sbjct: 604 VTRVTLAYEYCKRNDSANAMILLEPLDKK---LWIRTVRTLVRKLCSEKKVGVAALFFQK 660

Query: 504 MQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
           +       D V   +   A   +G+    +D+ + + R
Sbjct: 661 LLEKDSSADRVTLAAFTTACSESGKNNLVTDLTERISR 698



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 112/432 (25%), Positives = 193/432 (44%), Gaps = 5/432 (1%)

Query: 156 MRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSD 215
           M+   L P       +L    +  L +    V+ +M   GVV +   Y +++  C +   
Sbjct: 173 MQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGK 232

Query: 216 VDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNS 275
           + + ++ L  M  +    D  T   ++   C+ G+   A+    +M   G  P+++ + S
Sbjct: 233 IQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTS 292

Query: 276 LIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKG 333
           LI G C++G +++A  +  ++   G  PN  T+T LIDG C+    E+A RL   +    
Sbjct: 293 LIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSD 352

Query: 334 VY-PGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
            Y P V TY S++   CKE ++  A  L + M E+ + P+  T  TLIN +CK G    A
Sbjct: 353 TYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRA 412

Query: 393 MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
            ++ N M + G M + +TY A I   CK      A ELL      G      +Y+ L+  
Sbjct: 413 YELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQE 472

Query: 453 YCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGD 512
            C +N+    L         G   D+ +   LI  FC+++K+  ++RLF L+   G++  
Sbjct: 473 QCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPT 532

Query: 513 SVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDL--FWS 570
              YTS+   Y + G+         +M R   +     Y S  +   K + + +    + 
Sbjct: 533 KETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYE 592

Query: 571 HVVDRGLMSKHI 582
            ++DRGL    +
Sbjct: 593 AMIDRGLSPPEV 604



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 113/401 (28%), Positives = 177/401 (44%), Gaps = 5/401 (1%)

Query: 179 RLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTY 238
           RL + V  V   M   G+  +    N ++    +   ++  E +  EM  + V  D  +Y
Sbjct: 162 RLNEAVGMVMD-MQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSY 220

Query: 239 NTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI-- 296
             ++    + G   EA      M + G  PD  T   ++   C  G +  A   FR +  
Sbjct: 221 KLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMID 280

Query: 297 KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRD 356
            G  PN + +T+LIDG C+   +++A  + E M   G  P V T+ +++  LCK G    
Sbjct: 281 LGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEK 340

Query: 357 ANRLLNEMNEKKIAPDNV-TCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALI 415
           A RL  ++        NV T  ++I  YCK      A  + +RM E GL  +  TY  LI
Sbjct: 341 AFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLI 400

Query: 416 HGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLC 475
           +G CKA     A EL+  M D GF P+  +Y+  +D  C K+      +LL++  S GL 
Sbjct: 401 NGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLE 460

Query: 476 VDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDI 535
            D   Y  LI+  CK+  ++ A   F  M   G   D  +   L  A+ R  + K    +
Sbjct: 461 ADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERL 520

Query: 536 LDDMYRRRLMITLKIYRSFSASYAKDNEI-LDLFWSHVVDR 575
              +    L+ T + Y S  + Y K+ +I L L + H + R
Sbjct: 521 FQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKR 561



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/287 (22%), Positives = 123/287 (42%), Gaps = 36/287 (12%)

Query: 303 HVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLN 362
           H     ++  +     L EA+ +   M  +G+ P  +T N +L    + G I  A  + +
Sbjct: 147 HEVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFD 206

Query: 363 EMNEKKIA-----------------------------------PDNVTCNTLINAYCKIG 387
           EM+ + +                                    PDN TC  ++ A C+ G
Sbjct: 207 EMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENG 266

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
               A+    +M++ G   +   + +LI G CK   +  A E+L  M+  G+ P+  +++
Sbjct: 267 LVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHT 326

Query: 448 WLVDGYCNKNNEEALLKLLDEFV-SRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQG 506
            L+DG C +   E   +L  + V S     +V  Y ++I  +CK++K++ A+ LF+ M+ 
Sbjct: 327 ALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKE 386

Query: 507 NGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRS 553
            G+  +   YT+L   + +AG      ++++ M     M  +  Y +
Sbjct: 387 QGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNA 433



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/277 (20%), Positives = 114/277 (41%), Gaps = 46/277 (16%)

Query: 344 ILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAG 403
           +LR   + GR+ +A  ++ +M  + + P ++T N ++    ++G    A  V + M   G
Sbjct: 153 MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 212

Query: 404 LMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA-------------------------- 437
           ++ D  +YK ++ G  +  ++  A   L GM+                            
Sbjct: 213 VVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAI 272

Query: 438 ---------GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRF 488
                    GF P+  +++ L+DG C K + +   ++L+E V  G   +V  + ALI   
Sbjct: 273 WYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGL 332

Query: 489 CKKEKVDYAQRLF-NLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMIT 547
           CK+   + A RLF  L++ +    +   YTS+   Y +  +      +   M  + L   
Sbjct: 333 CKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPN 392

Query: 548 LKIYRSF------SASYAKDNEILDLFWSHVVDRGLM 578
           +  Y +       + S+ +  E+++L      D G M
Sbjct: 393 VNTYTTLINGHCKAGSFGRAYELMNLMG----DEGFM 425


>gi|297828900|ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328172|gb|EFH58591.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 790

 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 146/561 (26%), Positives = 255/561 (45%), Gaps = 81/561 (14%)

Query: 19  AIMLKGHWAKLLNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSL 78
           +I+ K +W    NP++ S L +     V  +L++    P  +  F  W  S  PN+KH++
Sbjct: 46  SILSKPNWQN--NPSLKSLLPAITPSHVS-SLFSLNLDPHTALQFSYWI-SQTPNFKHNV 101

Query: 79  QSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKI-HDDPDGNSHVLSWLV 137
            S+ +++ ++    H K   ++            P ++ +++K  +  PD          
Sbjct: 102 DSYASLLTLI---DHHKIVSDV------------PKIIVSMIKCCYSAPDA--------- 137

Query: 138 IFYANL--KMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           +F +++  KM++D +     ++ +N          LL  LA+  L D + ++Y +M++  
Sbjct: 138 LFVSDICRKMSKDDITKL-SLKCYN---------ELLTLLARFGLVDEMNQLYTEMLEEF 187

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
           V  +I+ +N++I+  CK   V + ++ +C+M    +  D FT  + I  YC+      A 
Sbjct: 188 VSMDIYTFNLMINVYCKMGFVKEAKQFMCKMIQAGLSPDYFTSTSFILGYCRSKDVDSAF 247

Query: 256 AVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF---RD-------------IKGA 299
            V + M       + V+YN LIHG C  GR+ EA  LF   +D             IKG 
Sbjct: 248 RVFEEMPNR----NEVSYNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGL 303

Query: 300 --------------------TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVV 339
                                P+ +TY +LI G CRA  L+ A RL  +M  +G+ P   
Sbjct: 304 CRKNVHKAMGLLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQR 363

Query: 340 TYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRM 399
           TY   +  LCK  R+ +A RL + + E+ ++ + +  + LI+ YCK+G    A  +  +M
Sbjct: 364 TYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKM 423

Query: 400 LEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNE 459
           L      + +T+ ALIHG C A  +  A  L   M+  G  P+  +++ L+     + + 
Sbjct: 424 LSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDF 483

Query: 460 EALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
           +   K L + +S G       Y A I  +C   KV  A+ +   M+  G+  D   YTSL
Sbjct: 484 DDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSL 543

Query: 520 AYAYWRAGEPKACSDILDDMY 540
             AY + G   +  D+L  M+
Sbjct: 544 IKAYGKLGLTYSAFDVLKSMF 564



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 111/423 (26%), Positives = 195/423 (46%), Gaps = 32/423 (7%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           + + +F +M+     P+++  T L+  L +  +   +  +  +M++  +V ++  YN LI
Sbjct: 276 EAVSLFVRMKDDCCYPNVYTYTALIKGLCRKNVHKAMG-LLDEMLERNLVPDLITYNSLI 334

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
              C++  +D   +LL  M+ + +  D  TY   I   CK     EA  + D +  EG+S
Sbjct: 335 AGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVS 394

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
            +++ Y+ LI G+C+ G++ EA  LF  +  K  +PN  T+  LI G C A +L+EAL L
Sbjct: 395 ANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSL 454

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
            + M   G+ P V T+N ++ ++ K+G   DA++ L +M      P   T N  I  YC 
Sbjct: 455 FDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCS 514

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            G    A  +  +M E G+  D FTY +LI  + K      A ++L  M DA   PS+ +
Sbjct: 515 AGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDADCEPSHHT 574

Query: 446 YSWLVDGYCNKN-----------------------------NEEALLKLLDEFVSRGLCV 476
           +  L+    +K                                + +++L +E    G   
Sbjct: 575 FLSLIKQLFDKRYVVEKSGETGVESVSNFGDVPGSNMWKMMEFDIVIELFEEMEKHGCTP 634

Query: 477 DVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDIL 536
           D   Y  LI   CK E +  A +L + MQ  GI    +++ ++     +  +    ++I+
Sbjct: 635 DSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFNAVISCCCKLQKYGEAANIV 694

Query: 537 DDM 539
           +DM
Sbjct: 695 EDM 697



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 107/360 (29%), Positives = 171/360 (47%), Gaps = 9/360 (2%)

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKD--VRADLFTYNTLIALYCKKGMHYE 253
           +V+++    V +  CC S+        +C    KD   +  L  YN L+ L  + G+  E
Sbjct: 116 IVSDVPKIIVSMIKCCYSAPDALFVSDICRKMSKDDITKLSLKCYNELLTLLARFGLVDE 175

Query: 254 ALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLID 311
              +   M  E +S DI T+N +I+ +C+ G ++EA++    +   G +P++ T T+ I 
Sbjct: 176 MNQLYTEMLEEFVSMDIYTFNLMINVYCKMGFVKEAKQFMCKMIQAGLSPDYFTSTSFIL 235

Query: 312 GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAP 371
           GYCR+ D++ A R+ E M  +      V+YN ++  LC+ GRI +A  L   M +    P
Sbjct: 236 GYCRSKDVDSAFRVFEEMPNRNE----VSYNQLIHGLCEAGRIDEAVSLFVRMKDDCCYP 291

Query: 372 DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
           +  T   LI   C+  +   AM + + MLE  L+ D  TY +LI G C+A  +D A  LL
Sbjct: 292 NVYTYTALIKGLCR-KNVHKAMGLLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLL 350

Query: 432 FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
             M + G  P   +Y   +D  C  N  E   +L D     G+  +V +Y  LI  +CK 
Sbjct: 351 SLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKV 410

Query: 492 EKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIY 551
            KVD A  LF  M       ++  + +L +    AG  K    + D M +  L  T+  +
Sbjct: 411 GKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTF 470



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 98/427 (22%), Positives = 180/427 (42%), Gaps = 31/427 (7%)

Query: 156 MRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSD 215
           M+   L+P        ++ L K    +   +++  + + GV AN+ +Y+VLI   CK   
Sbjct: 353 MKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGK 412

Query: 216 VDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNS 275
           VD+   L  +M  K+   + +T+N LI   C  G   EAL++ D+M + G+ P + T+N 
Sbjct: 413 VDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNI 472

Query: 276 LIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKG 333
           LI    ++G   +A +  + +   G  P   TY   I+ YC A  ++EA  +   M  +G
Sbjct: 473 LIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEG 532

Query: 334 VYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLI------------- 380
           V P   TY S+++   K G    A  +L  M +    P + T  +LI             
Sbjct: 533 VPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDADCEPSHHTFLSLIKQLFDKRYVVEKS 592

Query: 381 -----NAYCKIGDTASA-----------MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEM 424
                 +    GD   +           +++   M + G   D   Y+ LI G CK + +
Sbjct: 593 GETGVESVSNFGDVPGSNMWKMMEFDIVIELFEEMEKHGCTPDSKCYEKLISGICKVENL 652

Query: 425 DIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRAL 484
            IA +LL  M   G SPS   ++ ++   C          ++++ +  G    +   + L
Sbjct: 653 GIALKLLDQMQKEGISPSEMVFNAVISCCCKLQKYGEAANIVEDMICSGHSPQLEHCKTL 712

Query: 485 IRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL 544
           I    ++ + +    +F  ++G G   D + +  L     + G  +  S + ++M +   
Sbjct: 713 ICGLYEEGETERGNSVFKKLRGCGYNDDEIAWKILIDGMLKQGLVEEFSQLFEEMEKNGC 772

Query: 545 MITLKIY 551
             + + Y
Sbjct: 773 NFSPRTY 779



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 89/355 (25%), Positives = 147/355 (41%), Gaps = 35/355 (9%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N++  + L+    +    ++ L +FDQM    L P ++   +L+  + K    D   K  
Sbjct: 431 NAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCL 490

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
           +KM+  G       YN  I   C +  V + E ++ +M+ + V  D FTY +LI  Y K 
Sbjct: 491 QKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKL 550

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREAR------------------ 290
           G+ Y A  V   M      P   T+ SLI     +  + E                    
Sbjct: 551 GLTYSAFDVLKSMFDADCEPSHHTFLSLIKQLFDKRYVVEKSGETGVESVSNFGDVPGSN 610

Query: 291 -----------RLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPG 337
                       LF +++  G TP+   Y  LI G C+  +L  AL+L + M  +G+ P 
Sbjct: 611 MWKMMEFDIVIELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPS 670

Query: 338 VVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKN 397
            + +N+++   CK  +  +A  ++ +M     +P    C TLI    + G+T     V  
Sbjct: 671 EMVFNAVISCCCKLQKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEEGETERGNSVFK 730

Query: 398 RMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAG--FSPSYCSYSWLV 450
           ++   G   D+  +K LI G  K   ++   +L   M   G  FSP   +YS L 
Sbjct: 731 KLRGCGYNDDEIAWKILIDGMLKQGLVEEFSQLFEEMEKNGCNFSPR--TYSILT 783



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 79/169 (46%), Gaps = 2/169 (1%)

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
           D+V +++++M + G   +   Y  LI   CK  ++    KLL +M+ + +      +N +
Sbjct: 618 DIVIELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFNAV 677

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGATP 301
           I+  CK   + EA  + + M   G SP +    +LI G   EG       +F+ ++G   
Sbjct: 678 ISCCCKLQKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEEGETERGNSVFKKLRGCGY 737

Query: 302 N--HVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
           N   + +  LIDG  +   +EE  +L E M   G      TY+ + +KL
Sbjct: 738 NDDEIAWKILIDGMLKQGLVEEFSQLFEEMEKNGCNFSPRTYSILTQKL 786


>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Vitis vinifera]
          Length = 539

 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 122/468 (26%), Positives = 214/468 (45%), Gaps = 4/468 (0%)

Query: 77  SLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWL 136
           +L S   M+H+      F+ A+ +     ++ + +  S+   +      PD   + L+ +
Sbjct: 40  ALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPD--VYTLTIV 97

Query: 137 VIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGV 196
           +  + +L      L V  ++      P     T L+  L           V+ KMV  G 
Sbjct: 98  INSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGF 157

Query: 197 VANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALA 256
             N+  Y  L++  CK   + +   L  EM  K +  D+FTYN+LI   C          
Sbjct: 158 QPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTT 217

Query: 257 VQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYC 314
           + + M +  I P++V+ N ++   C+EG++ EA  +   +   G  P+ VTY  L+DG+C
Sbjct: 218 LLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHC 277

Query: 315 RANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNV 374
             ++++EA+++ ++M   G    VV+YN+++   CK  RI  A  L  EM  +++ P+ +
Sbjct: 278 LRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTM 337

Query: 375 TCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGM 434
           T +TLI+  C +G    A+ + N M+  G + +  TY  L+   CK   +  A  LL  +
Sbjct: 338 TYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAI 397

Query: 435 LDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKV 494
             +   P    Y+  +DG C   + EA   L      RGL  DV  +  +IR  CK+  +
Sbjct: 398 EGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLL 457

Query: 495 DYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRR 542
           D A +LF  M  NG L +   Y ++     +  +      +L++M  R
Sbjct: 458 DEASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLAR 505



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 113/399 (28%), Positives = 201/399 (50%), Gaps = 2/399 (0%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D L  F +M   +  P +     LL S+AK +    V  + KKM   G+  +++   ++I
Sbjct: 39  DALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTIVI 98

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           ++ C  + VD    +L ++     + D  T+ TL+   C  G   EAL V D+M  EG  
Sbjct: 99  NSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQ 158

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
           P++VTY +L++G C++ ++ EA  LF ++  KG +P+  TY +LI   C   + +    L
Sbjct: 159 PNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTL 218

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
              M    + P VV+ N ++  LCKEG++ +A+ +++ M +  + PD VT   L++ +C 
Sbjct: 219 LNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCL 278

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
             +   A+KV + M+  G + +  +Y  LI+G+CK + +D A  L   M      P+  +
Sbjct: 279 RSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMT 338

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           YS L+ G C+    +  + L +E V+ G   ++  Y  L+   CK  ++  A  L   ++
Sbjct: 339 YSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIE 398

Query: 506 GNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL 544
           G+ +  D  +Y        RAG+ +A  D+  ++  R L
Sbjct: 399 GSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGL 437



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 122/430 (28%), Positives = 200/430 (46%), Gaps = 4/430 (0%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           SVL  ++K+   PD  +   + LV     +    + L VFD+M      P++     L+N
Sbjct: 112 SVLAKILKLGHQPD--TATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMN 169

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
            L KDR       ++ +M+  G+  +I  YN LIHA C   +   V  LL EM    +  
Sbjct: 170 GLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMP 229

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           ++ + N ++   CK+G   EA  V D M + G+ PD+VTY +L+ G C    M EA ++F
Sbjct: 230 NVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVF 289

Query: 294 RDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
             +   G   N V+Y TLI+GYC+   +++A+ L E M  + + P  +TY++++  LC  
Sbjct: 290 DMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHV 349

Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
           GR++DA  L NEM      P+ VT + L++  CK    A AM +   +  + L  D   Y
Sbjct: 350 GRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVY 409

Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
              I G C+A +++ A++L   +   G  P   +++ ++ G C +   +   KL  E   
Sbjct: 410 NIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDE 469

Query: 472 RGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKA 531
            G   +   Y  + +   +  K   A +L   M   G   D      L       G  ++
Sbjct: 470 NGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFSADVSTTALLVKMLSDDGLDQS 529

Query: 532 CSDILDDMYR 541
              IL +  R
Sbjct: 530 VKQILCEFMR 539



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 102/400 (25%), Positives = 193/400 (48%), Gaps = 19/400 (4%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHV 132
            ++ ++ ++ T+++ L K++    A N+  ++  +         N+L+          H 
Sbjct: 156 GFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLI----------HA 205

Query: 133 LSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMV 192
           L        NL   +    + ++M    +MP++ +  +++++L K+        V   M+
Sbjct: 206 L-------CNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMI 258

Query: 193 QLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHY 252
           Q GV  ++  Y  L+   C  S++D+  K+   M       ++ +YNTLI  YCK     
Sbjct: 259 QGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRID 318

Query: 253 EALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLI 310
           +A+ + + M R+ + P+ +TY++LIHG C  GR+++A  LF ++   G  PN VTY+ L+
Sbjct: 319 KAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILL 378

Query: 311 DGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIA 370
           D  C+ + L EA+ L + +    + P V  YN  +  +C+ G +  A  L + +  + + 
Sbjct: 379 DYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQ 438

Query: 371 PDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL 430
           PD  T N +I   CK G    A K+   M E G + +  TY  +  G  +  +   A +L
Sbjct: 439 PDVWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQL 498

Query: 431 LFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFV 470
           L  ML  GFS    + + LV    +   ++++ ++L EF+
Sbjct: 499 LEEMLARGFSADVSTTALLVKMLSDDGLDQSVKQILCEFM 538



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/316 (25%), Positives = 143/316 (45%), Gaps = 6/316 (1%)

Query: 245 YCKKGMHY----EALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR--DIKG 298
           +  K +H+    +AL+   RM      P I  +  L+    +         L +  D  G
Sbjct: 27  FQSKSLHFNTLDDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFG 86

Query: 299 ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDAN 358
             P+  T T +I+ +C  N ++ AL +   +   G  P   T+ +++R LC  G+I +A 
Sbjct: 87  IPPDVYTLTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEAL 146

Query: 359 RLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGF 418
            + ++M  +   P+ VT  TL+N  CK      A+ + + M+  G+  D FTY +LIH  
Sbjct: 147 DVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHAL 206

Query: 419 CKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDV 478
           C   E      LL  M+ +   P+  S + +VD  C +        ++D  +  G+  DV
Sbjct: 207 CNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDV 266

Query: 479 SVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDD 538
             Y AL+   C + ++D A ++F++M  NG + + V Y +L   Y +         + ++
Sbjct: 267 VTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEE 326

Query: 539 MYRRRLMITLKIYRSF 554
           M R+ L+     Y + 
Sbjct: 327 MCRQELIPNTMTYSTL 342



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/264 (24%), Positives = 111/264 (42%)

Query: 301 PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRL 360
           P    +  L+    +       L L + M + G+ P V T   ++   C   R+  A  +
Sbjct: 54  PPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTIVINSFCHLNRVDFALSV 113

Query: 361 LNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCK 420
           L ++ +    PD  T  TL+   C +G    A+ V ++M+  G   +  TY  L++G CK
Sbjct: 114 LAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCK 173

Query: 421 AKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSV 480
            +++  A  L   M+  G SP   +Y+ L+   CN    + +  LL+E V   +  +V  
Sbjct: 174 DRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVS 233

Query: 481 YRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMY 540
              ++   CK+ KV  A  + ++M   G+  D V Y +L   +    E      + D M 
Sbjct: 234 LNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMV 293

Query: 541 RRRLMITLKIYRSFSASYAKDNEI 564
           R   +  +  Y +    Y K   I
Sbjct: 294 RNGCVCNVVSYNTLINGYCKIQRI 317



 Score = 43.5 bits (101), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 37/181 (20%), Positives = 69/181 (38%), Gaps = 5/181 (2%)

Query: 392 AMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVD 451
           A+   +RML        F +  L+    K K       L   M   G  P   + + +++
Sbjct: 40  ALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTIVIN 99

Query: 452 GYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILG 511
            +C+ N  +  L +L + +  G   D + +  L+R  C   K+  A  +F+ M G G   
Sbjct: 100 SFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQP 159

Query: 512 DSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSH 571
           + V Y +L     +  +     ++  +M  + +   +  Y S   +     E     W H
Sbjct: 160 NVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCE-----WKH 214

Query: 572 V 572
           V
Sbjct: 215 V 215


>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
 gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
          Length = 567

 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 122/384 (31%), Positives = 190/384 (49%), Gaps = 19/384 (4%)

Query: 171 LLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKD 230
           LL  L ++   D    V+++M+      +   + +L+   C+S+ ++K  KLL  M+   
Sbjct: 13  LLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARKLLGRMKEMG 72

Query: 231 VRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREAR 290
              D   YN LI+ Y K     +A      M +    P +VTY +++ G C+  R R+A 
Sbjct: 73  CVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAERTRDAV 132

Query: 291 RLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
           +L  ++  KG +PN  TY  +++G C    L+EA ++ E MA +G +P VVTYNS ++ L
Sbjct: 133 KLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGL 192

Query: 349 CKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ 408
           CK  R+ +A + L  M    + PD V+  T+IN  CK GD  SA ++ + M   G   D 
Sbjct: 193 CKCDRVDEARKFLARM---PVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDV 249

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
            TY +LI GFCK  E++ A  LL  ML  G  P+  +Y+ L+       +      +L E
Sbjct: 250 VTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVE 309

Query: 469 FVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG----------ILGDSVIYTS 518
              RG   DV  Y A I   CK E+V  A+ +F+ M   G          ++ D ++YT 
Sbjct: 310 MERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTV 369

Query: 519 LAYAYWRAGE-PKAC---SDILDD 538
           L     + G   +AC   S +LD+
Sbjct: 370 LLDGLCKGGRFDEACALFSKVLDE 393



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 107/363 (29%), Positives = 182/363 (50%), Gaps = 15/363 (4%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           VF +M   +  P      +LL  L +    +   K+  +M ++G V +  +YN LI    
Sbjct: 29  VFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARKLLGRMKEMGCVPDDAIYNALISGYS 88

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           K+ D  +  K L EM        + TY  ++   CK     +A+ + D M  +G SP+I 
Sbjct: 89  KAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAERTRDAVKLLDEMRDKGCSPNIY 148

Query: 272 TYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           TYN ++ G C E ++ EA+++  +  ++G  P+ VTY + I G C+ + ++EA   R+ +
Sbjct: 149 TYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEA---RKFL 205

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
           A   V P VV+Y +++  LCK G +  A+R+L+ M+ +   PD VT ++LI+ +CK G+ 
Sbjct: 206 ARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEV 265

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
             AM + + ML+ G   +   Y +L+    +   +  A+++L  M   GF+P   SY+  
Sbjct: 266 ERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNAC 325

Query: 450 VDGYCNKNNEEALLKLLDEFVSRG----------LCVDVSVYRALIRRFCKKEKVDYAQR 499
           +DG C     +    + D  V RG          L VD+ +Y  L+   CK  + D A  
Sbjct: 326 IDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACA 385

Query: 500 LFN 502
           LF+
Sbjct: 386 LFS 388



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 125/485 (25%), Positives = 211/485 (43%), Gaps = 70/485 (14%)

Query: 84  MIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWL------- 136
           ++  L ++   + A+ +L ++     +   ++ NAL+  +           +L       
Sbjct: 48  LLRGLCRSNQLEKARKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNH 107

Query: 137 ----VIFYANL-------KMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVW 185
               V+ Y N+       + T+D +++ D+MR     P+++   V++  L ++R  D   
Sbjct: 108 CLPTVVTYTNIVDGLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAK 167

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
           K+ ++M   G   ++  YN  I   CK   VD+  K L  M    V  D+ +Y T+I   
Sbjct: 168 KMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMP---VTPDVVSYTTVINGL 224

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--------- 296
           CK G    A  + D M   G +PD+VTY+SLI GFC+ G +  A  L   +         
Sbjct: 225 CKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNM 284

Query: 297 ----------------------------KGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
                                       +G TP+ V+Y   IDG C+A  +++A  + + 
Sbjct: 285 VAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDR 344

Query: 329 MAAKGVYPG----------VVTYNSILRKLCKEGRIRDANRLLNE-MNEKKIAPDNVTCN 377
           M  +G  P           ++ Y  +L  LCK GR  +A  L ++ ++EK   PD    N
Sbjct: 345 MVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYN 404

Query: 378 TLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA 437
            +++++CK      A+++  +MLE     +  T+  L+HG C    +  A+ +L  M+D 
Sbjct: 405 VMLDSHCKRRQIDKALQIHKQMLEKNC-CNVVTWNILVHGLCVDDRLSDAETMLLTMVDE 463

Query: 438 GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYA 497
           GF P + +Y  LVD  C      A L+L +E V  G   DV  Y ALI     +   + A
Sbjct: 464 GFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEA 523

Query: 498 QRLFN 502
             LF 
Sbjct: 524 YLLFT 528



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 179/365 (49%), Gaps = 12/365 (3%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           ++  +M+    +P       L++  +K +     +K   +MV+   +  +  Y  ++   
Sbjct: 63  KLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGL 122

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           CK+       KLL EM  K    +++TYN ++   C++    EA  + + M   G  PD+
Sbjct: 123 CKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDV 182

Query: 271 VTYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMA 330
           VTYNS I G C+  R+ EAR+    +   TP+ V+YTT+I+G C++ DL+ A R+ + M+
Sbjct: 183 VTYNSFIKGLCKCDRVDEARKFLARMP-VTPDVVSYTTVINGLCKSGDLDSASRMLDHMS 241

Query: 331 AKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTA 390
            +G  P VVTY+S++   CK G +  A  LL+ M +    P+ V  N+L+ A  ++G   
Sbjct: 242 NRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIG 301

Query: 391 SAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLV 450
            A  +   M   G   D  +Y A I G CKA+ +  AK +   M++ G +P+  SYS L+
Sbjct: 302 KAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLI 361

Query: 451 ----------DGYCNKNNEEALLKLLDEFVSRGLC-VDVSVYRALIRRFCKKEKVDYAQR 499
                     DG C     +    L  + +   +C  DV  Y  ++   CK+ ++D A +
Sbjct: 362 VDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQ 421

Query: 500 LFNLM 504
           +   M
Sbjct: 422 IHKQM 426



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 101/351 (28%), Positives = 164/351 (46%), Gaps = 5/351 (1%)

Query: 194 LGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYE 253
           +G   N+  YN L+    +    DK   +  EM  K  + D FT+  L+   C+     +
Sbjct: 1   MGYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEK 60

Query: 254 ALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLID 311
           A  +  RM+  G  PD   YN+LI G+ +     +A +   ++      P  VTYT ++D
Sbjct: 61  ARKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVD 120

Query: 312 GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAP 371
           G C+A    +A++L + M  KG  P + TYN I+  LC+E ++ +A ++L EM  +   P
Sbjct: 121 GLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFP 180

Query: 372 DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
           D VT N+ I   CK      A K   RM    +  D  +Y  +I+G CK+ ++D A  +L
Sbjct: 181 DVVTYNSFIKGLCKCDRVDEARKFLARM---PVTPDVVSYTTVINGLCKSGDLDSASRML 237

Query: 432 FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
             M + G +P   +YS L+DG+C     E  + LLD  +  G   ++  Y +L+    + 
Sbjct: 238 DHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRL 297

Query: 492 EKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRR 542
             +  A+ +   M+  G   D V Y +      +A   K    + D M  R
Sbjct: 298 GHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVER 348



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 167/365 (45%), Gaps = 36/365 (9%)

Query: 68  ESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALR-DFLSTPSVLNALVKIHDDP 126
           E AV  Y   + ++ + I  L K      A+  L ++ +  D +S  +V+N L K   D 
Sbjct: 172 EMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVTPDVVSYTTVINGLCK-SGDL 230

Query: 127 DGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWK 186
           D  S +L                    D M      P +   + L++   K    +    
Sbjct: 231 DSASRML--------------------DHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMG 270

Query: 187 VYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYC 246
           +   M++LG   N+  YN L+ A  +   + K E +L EME +    D+ +YN  I   C
Sbjct: 271 LLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLC 330

Query: 247 KKGMHYEALAVQDRMEREGISP----------DIVTYNSLIHGFCREGRMREARRLFR-- 294
           K     +A AV DRM   G +P          DI+ Y  L+ G C+ GR  EA  LF   
Sbjct: 331 KAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKV 390

Query: 295 -DIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGR 353
            D K   P+   Y  ++D +C+   +++AL++ + M  K     VVT+N ++  LC + R
Sbjct: 391 LDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNCC-NVVTWNILVHGLCVDDR 449

Query: 354 IRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKA 413
           + DA  +L  M ++   PD VT  TL++A CK G +A+A+++    ++ G + D  TY A
Sbjct: 450 LSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSA 509

Query: 414 LIHGF 418
           LI G 
Sbjct: 510 LITGL 514



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 78/267 (29%), Positives = 125/267 (46%), Gaps = 3/267 (1%)

Query: 298 GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDA 357
           G   N  TY  L+    R +  ++A  + + M  K   P   T+  +LR LC+  ++  A
Sbjct: 2   GYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKA 61

Query: 358 NRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHG 417
            +LL  M E    PD+   N LI+ Y K  D   A K    M++   +    TY  ++ G
Sbjct: 62  RKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDG 121

Query: 418 FCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVD 477
            CKA+    A +LL  M D G SP+  +Y+ +V+G C +   +   K+L+E   RG   D
Sbjct: 122 LCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPD 181

Query: 478 VSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILD 537
           V  Y + I+  CK ++VD A++    M    +  D V YT++     ++G+  + S +LD
Sbjct: 182 VVTYNSFIKGLCKCDRVDEARKFLARMP---VTPDVVSYTTVINGLCKSGDLDSASRMLD 238

Query: 538 DMYRRRLMITLKIYRSFSASYAKDNEI 564
            M  R     +  Y S    + K  E+
Sbjct: 239 HMSNRGCTPDVVTYSSLIDGFCKGGEV 265



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 84/335 (25%), Positives = 144/335 (42%), Gaps = 40/335 (11%)

Query: 80  SHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSV----------------------LN 117
           S+ T+I+ L K+    SA  ML+ ++ R    TP V                      L+
Sbjct: 216 SYTTVINGLCKSGDLDSASRMLDHMSNRG--CTPDVVTYSSLIDGFCKGGEVERAMGLLD 273

Query: 118 ALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAK 177
           +++K+   P  N    + L+     L        +  +M      P + +    ++ L K
Sbjct: 274 SMLKLGCRP--NMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCK 331

Query: 178 DRLTDMVWKVYKKMVQLGVVAN----------IHLYNVLIHACCKSSDVDKVEKLLCE-M 226
                    V+ +MV+ G   N          I LY VL+   CK    D+   L  + +
Sbjct: 332 AERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVL 391

Query: 227 EFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRM 286
           + K    D+F YN ++  +CK+    +AL +  +M  +    ++VT+N L+HG C + R+
Sbjct: 392 DEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNCC-NVVTWNILVHGLCVDDRL 450

Query: 287 REARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSI 344
            +A  +   +  +G  P+ VTY TL+D  C+      AL L E     G  P VVTY+++
Sbjct: 451 SDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSAL 510

Query: 345 LRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTL 379
           +  L  E    +A  L  ++ E++  PD+ T   L
Sbjct: 511 ITGLVHENMAEEAYLLFTKLVERRWVPDDKTLGLL 545



 Score = 72.0 bits (175), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 73/289 (25%), Positives = 125/289 (43%), Gaps = 35/289 (12%)

Query: 75  KHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVL--NALVKIHDDPDGNSHV 132
           + ++ ++ +++  L +  H   A++ML ++  R F  TP V+  NA +      DG    
Sbjct: 281 RPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGF--TPDVVSYNACI------DG---- 328

Query: 133 LSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHAC----------TVLLNSLAKDRLTD 182
                      +  +    VFD+M      P+  +           TVLL+ L K    D
Sbjct: 329 -------LCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFD 381

Query: 183 MVWKVYKKMVQLGVV-ANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
               ++ K++   +   ++  YNV++ + CK   +DK  ++  +M  K+   ++ T+N L
Sbjct: 382 EACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNC-CNVVTWNIL 440

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGA 299
           +   C      +A  +   M  EG  PD VTY +L+   C+ G+   A  LF +    G 
Sbjct: 441 VHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGC 500

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
            P+ VTY+ LI G    N  EEA  L   +  +   P   T   + RKL
Sbjct: 501 VPDVVTYSALITGLVHENMAEEAYLLFTKLVERRWVPDDKTLGLLHRKL 549


>gi|5738362|emb|CAB52870.1| putative protein [Arabidopsis thaliana]
 gi|7268785|emb|CAB78991.1| putative protein [Arabidopsis thaliana]
          Length = 1302

 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 120/401 (29%), Positives = 193/401 (48%), Gaps = 5/401 (1%)

Query: 126  PDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVW 185
            PD +S+ L  +VI        Q+  +    M     +P    CT++L +L ++ L +   
Sbjct: 816  PDSSSYKL--MVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAI 873

Query: 186  KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
              ++KM+ LG   N+  +  LI   CK   + +  ++L EM     + +++T+  LI   
Sbjct: 874  WYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGL 933

Query: 246  CKKGMHYEALAVQDRMER-EGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPN 302
            CK+G   +A  +  ++ R +   P++ TY S+I G+C+E ++  A  LF  +K  G  PN
Sbjct: 934  CKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPN 993

Query: 303  HVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLN 362
              TYTTLI+G+C+A     A  L  +M  +G  P + TYN+ +  LCK+ R  +A  LLN
Sbjct: 994  VNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLN 1053

Query: 363  EMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAK 422
            +     +  D VT   LI   CK  D   A+    RM + G   D      LI  FC+ K
Sbjct: 1054 KAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQK 1113

Query: 423  EMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYR 482
            +M  ++ L   ++  G  P+  +Y+ ++  YC + + +  LK        G   D   Y 
Sbjct: 1114 KMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYG 1173

Query: 483  ALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAY 523
            +LI   CKK  VD A +L+  M   G+    V   +LAY Y
Sbjct: 1174 SLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEY 1214



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 108/398 (27%), Positives = 189/398 (47%), Gaps = 6/398 (1%)

Query: 147  QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVV-ANIHLYNV 205
            +   ++ ++M  +   P+++  T L++ L K   T+  ++++ K+V+      N+H Y  
Sbjct: 905  KQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTS 964

Query: 206  LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
            +I   CK   +++ E L   M+ + +  ++ TY TLI  +CK G    A  + + M  EG
Sbjct: 965  MIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEG 1024

Query: 266  ISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEAL 323
              P+I TYN+ I   C++ R  EA  L       G   + VTYT LI   C+ ND+ +AL
Sbjct: 1025 FMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQAL 1084

Query: 324  RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
                 M   G    +   N ++   C++ +++++ RL   +    + P   T  ++I+ Y
Sbjct: 1085 AFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCY 1144

Query: 384  CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY 443
            CK GD   A+K  + M   G + D FTY +LI G CK   +D A +L   M+D G SP  
Sbjct: 1145 CKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPE 1204

Query: 444  CSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNL 503
             +   L   YC +N+    + LL+    +   + +   R L+R+ C ++KV  A   F  
Sbjct: 1205 VTRVTLAYEYCKRNDSANAMILLEPLDKK---LWIRTVRTLVRKLCSEKKVGVAALFFQK 1261

Query: 504  MQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
            +       D V   +   A   +G+    +D+ + + R
Sbjct: 1262 LLEKDSSADRVTLAAFTTACSESGKNNLVTDLTERISR 1299



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 112/432 (25%), Positives = 193/432 (44%), Gaps = 5/432 (1%)

Query: 156  MRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSD 215
            M+   L P       +L    +  L +    V+ +M   GVV +   Y +++  C +   
Sbjct: 774  MQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGK 833

Query: 216  VDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNS 275
            + + ++ L  M  +    D  T   ++   C+ G+   A+    +M   G  P+++ + S
Sbjct: 834  IQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTS 893

Query: 276  LIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKG 333
            LI G C++G +++A  +  ++   G  PN  T+T LIDG C+    E+A RL   +    
Sbjct: 894  LIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSD 953

Query: 334  VY-PGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
             Y P V TY S++   CKE ++  A  L + M E+ + P+  T  TLIN +CK G    A
Sbjct: 954  TYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRA 1013

Query: 393  MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
             ++ N M + G M + +TY A I   CK      A ELL      G      +Y+ L+  
Sbjct: 1014 YELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQE 1073

Query: 453  YCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGD 512
             C +N+    L         G   D+ +   LI  FC+++K+  ++RLF L+   G++  
Sbjct: 1074 QCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPT 1133

Query: 513  SVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDL--FWS 570
               YTS+   Y + G+         +M R   +     Y S  +   K + + +    + 
Sbjct: 1134 KETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYE 1193

Query: 571  HVVDRGLMSKHI 582
             ++DRGL    +
Sbjct: 1194 AMIDRGLSPPEV 1205



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 109/389 (28%), Positives = 171/389 (43%), Gaps = 4/389 (1%)

Query: 179  RLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTY 238
            RL + V  V   M   G+  +    N ++    +   ++  E +  EM  + V  D  +Y
Sbjct: 763  RLNEAVGMVMD-MQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSY 821

Query: 239  NTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK- 297
              ++    + G   EA      M + G  PD  T   ++   C  G +  A   FR +  
Sbjct: 822  KLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMID 881

Query: 298  -GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRD 356
             G  PN + +T+LIDG C+   +++A  + E M   G  P V T+ +++  LCK G    
Sbjct: 882  LGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEK 941

Query: 357  ANRLLNEMNEKKIAPDNV-TCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALI 415
            A RL  ++        NV T  ++I  YCK      A  + +RM E GL  +  TY  LI
Sbjct: 942  AFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLI 1001

Query: 416  HGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLC 475
            +G CKA     A EL+  M D GF P+  +Y+  +D  C K+      +LL++  S GL 
Sbjct: 1002 NGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLE 1061

Query: 476  VDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDI 535
             D   Y  LI+  CK+  ++ A   F  M   G   D  +   L  A+ R  + K    +
Sbjct: 1062 ADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERL 1121

Query: 536  LDDMYRRRLMITLKIYRSFSASYAKDNEI 564
               +    L+ T + Y S  + Y K+ +I
Sbjct: 1122 FQLVVSLGLIPTKETYTSMISCYCKEGDI 1150



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/287 (22%), Positives = 123/287 (42%), Gaps = 36/287 (12%)

Query: 303  HVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLN 362
            H     ++  +     L EA+ +   M  +G+ P  +T N +L    + G I  A  + +
Sbjct: 748  HEVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFD 807

Query: 363  EMNEKKIA-----------------------------------PDNVTCNTLINAYCKIG 387
            EM+ + +                                    PDN TC  ++ A C+ G
Sbjct: 808  EMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENG 867

Query: 388  DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
                A+    +M++ G   +   + +LI G CK   +  A E+L  M+  G+ P+  +++
Sbjct: 868  LVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHT 927

Query: 448  WLVDGYCNKNNEEALLKLLDEFV-SRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQG 506
             L+DG C +   E   +L  + V S     +V  Y ++I  +CK++K++ A+ LF+ M+ 
Sbjct: 928  ALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKE 987

Query: 507  NGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRS 553
             G+  +   YT+L   + +AG      ++++ M     M  +  Y +
Sbjct: 988  QGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNA 1034



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 58/277 (20%), Positives = 115/277 (41%), Gaps = 46/277 (16%)

Query: 344  ILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAG 403
            +LR   + GR+ +A  ++ +M  + + P ++T N ++    ++G    A  V + M   G
Sbjct: 754  MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 813

Query: 404  LMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA-------------------------- 437
            ++ D  +YK ++ G  +  ++  A   L GM+                            
Sbjct: 814  VVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAI 873

Query: 438  ---------GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRF 488
                     GF P+  +++ L+DG C K + +   ++L+E V  G   +V  + ALI   
Sbjct: 874  WYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGL 933

Query: 489  CKKEKVDYAQRLF-NLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMIT 547
            CK+   + A RLF  L++ +    +   YTS+   Y +  +      +   M  + L   
Sbjct: 934  CKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPN 993

Query: 548  LKIYRSF------SASYAKDNEILDLFWSHVVDRGLM 578
            +  Y +       + S+ +  E+++L    + D G M
Sbjct: 994  VNTYTTLINGHCKAGSFGRAYELMNL----MGDEGFM 1026


>gi|15239874|ref|NP_196771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171712|sp|Q9FMQ1.1|PP376_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g12100, mitochondrial; Flags: Precursor
 gi|9759377|dbj|BAB10028.1| unnamed protein product [Arabidopsis thaliana]
 gi|28973713|gb|AAO64173.1| unknown protein [Arabidopsis thaliana]
 gi|29824237|gb|AAP04079.1| unknown protein [Arabidopsis thaliana]
 gi|110737169|dbj|BAF00534.1| hypothetical protein [Arabidopsis thaliana]
 gi|332004380|gb|AED91763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 816

 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 125/491 (25%), Positives = 223/491 (45%), Gaps = 24/491 (4%)

Query: 84  MIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIH---DDPDGN---------SH 131
           +I  L K K    A+ + +++  R  L +    N L+  +    +P+ +          H
Sbjct: 220 LIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADH 279

Query: 132 VLSWLVIFYANLK------MTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVW 185
           +   L+ F   LK      M +D   V  +M+    +P     ++L +  + +   +   
Sbjct: 280 IEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAAL 339

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
            VY+  V  GV  N +  ++L++A CK   ++K E++L     K +  +   YNT+I  Y
Sbjct: 340 GVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGY 399

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNH 303
           C+KG    A    + ME++G+ PD + YN LI  FC  G M  A +      +KG +P+ 
Sbjct: 400 CRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSV 459

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
            TY  LI GY R  + ++   + + M   G  P VV+Y +++  LCK  ++ +A  +  +
Sbjct: 460 ETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRD 519

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
           M ++ ++P     N LI+  C  G    A +    ML+ G+ L+  TY  LI G     +
Sbjct: 520 MEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGK 579

Query: 424 MDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRA 483
           +  A++LL  +   G  P   +Y+ L+ GY    N +  + L +E    G+   +  Y  
Sbjct: 580 LSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHL 639

Query: 484 LIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRR 543
           LI   C KE ++  +RLF  M    +  D ++Y  + + Y   G+ +   ++   M  + 
Sbjct: 640 LI-SLCTKEGIELTERLFGEMS---LKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKS 695

Query: 544 LMITLKIYRSF 554
           + +    Y S 
Sbjct: 696 IGLDKTTYNSL 706



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 140/523 (26%), Positives = 232/523 (44%), Gaps = 35/523 (6%)

Query: 88  LTKNKHFKSAQNMLEKIALRDFLSTP----SVLNALVKIHDDPDG------NSHVLSWLV 137
           L K K F+   N+   I   DF  +       + A VK+ D   G        H   +  
Sbjct: 154 LVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPS 213

Query: 138 IFYANL--------KMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYK 189
           +F  N+        K   D  Q+FD+M    L+P L     L++   K    +  +KV +
Sbjct: 214 VFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRE 273

Query: 190 KMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKG 249
           +M    +  ++  +N L+    K+  V+  E +L EM+      D FT++ L   Y    
Sbjct: 274 RMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNE 333

Query: 250 MHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF-RDI-KGATPNHVTYT 307
               AL V +     G+  +  T + L++  C+EG++ +A  +  R++ KG  PN V Y 
Sbjct: 334 KAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYN 393

Query: 308 TLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEK 367
           T+IDGYCR  DL  A    E M  +G+ P  + YN ++R+ C+ G + +A + +N+M  K
Sbjct: 394 TMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLK 453

Query: 368 KIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIA 427
            ++P   T N LI  Y +  +      +   M + G M +  +Y  LI+  CK  ++  A
Sbjct: 454 GVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEA 513

Query: 428 KELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRR 487
           + +   M D G SP    Y+ L+DG C+K   E   +   E + +G+ +++  Y  LI  
Sbjct: 514 QIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDG 573

Query: 488 FCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMIT 547
                K+  A+ L   +   G+  D   Y SL   Y  AG  + C  + ++M R  +  T
Sbjct: 574 LSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPT 633

Query: 548 LKIYRSFSASYAKDNEILDLFWSHVVDRGL-MSKHIFKEMQLR 589
           LK Y               L  S     G+ +++ +F EM L+
Sbjct: 634 LKTYH--------------LLISLCTKEGIELTERLFGEMSLK 662



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 127/528 (24%), Positives = 235/528 (44%), Gaps = 42/528 (7%)

Query: 67  AESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDP 126
            E A P    +       + +L +    ++A+ +L  +   D     S            
Sbjct: 44  PEQAPPTNPVTGDEKLRNLRVLLQQNRIETARGVLSSLLRSDSTPFASPKELFSAFSLSS 103

Query: 127 DGNSHVLSWLV--IFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMV 184
               H  S+L+  +     KM  +   +F  +R   + P   + T+LL+ L K +   + 
Sbjct: 104 PSLKHDFSYLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVT 163

Query: 185 WKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIAL 244
             V+  +++     +  +Y   I A  K SDV K                          
Sbjct: 164 INVFLNILESDFRPSKFMYGKAIQAAVKLSDVGK-------------------------- 197

Query: 245 YCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPN 302
                     L + +RM+ + I P +  YN LI G C+  RM +A +LF ++  +   P+
Sbjct: 198 ---------GLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPS 248

Query: 303 HVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLN 362
            +TY TLIDGYC+A + E++ ++RE M A  + P ++T+N++L+ L K G + DA  +L 
Sbjct: 249 LITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLK 308

Query: 363 EMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAK 422
           EM +    PD  T + L + Y       +A+ V    +++G+ ++ +T   L++  CK  
Sbjct: 309 EMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEG 368

Query: 423 EMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYR 482
           +++ A+E+L   +  G  P+   Y+ ++DGYC K +       ++    +G+  D   Y 
Sbjct: 369 KIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYN 428

Query: 483 ALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRR 542
            LIRRFC+  +++ A++  N M+  G+      Y  L   Y R  E   C DIL +M   
Sbjct: 429 CLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDN 488

Query: 543 RLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKEMQLRN 590
             M  +  Y +      K +++L+   + +V R +  + +  ++++ N
Sbjct: 489 GTMPNVVSYGTLINCLCKGSKLLE---AQIVKRDMEDRGVSPKVRIYN 533



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 103/387 (26%), Positives = 186/387 (48%), Gaps = 7/387 (1%)

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           L+  +  L   ++  +  ++M++  + P +    +L+    +    D  + + K+M   G
Sbjct: 430 LIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNG 489

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
            + N+  Y  LI+  CK S + + + +  +ME + V   +  YN LI   C KG   +A 
Sbjct: 490 TMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAF 549

Query: 256 AVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGY 313
                M ++GI  ++VTYN+LI G    G++ EA  L  +I  KG  P+  TY +LI GY
Sbjct: 550 RFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGY 609

Query: 314 CRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDN 373
             A +++  + L E M   G+ P + TY+ +L  LC +  I    RL  EM+   + PD 
Sbjct: 610 GFAGNVQRCIALYEEMKRSGIKPTLKTYH-LLISLCTKEGIELTERLFGEMS---LKPDL 665

Query: 374 VTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFG 433
           +  N +++ Y   GD   A  ++ +M+E  + LD+ TY +LI G  K  ++   + L+  
Sbjct: 666 LVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDE 725

Query: 434 MLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEK 493
           M      P   +Y+ +V G+C   +  +      E   +G  +DV +   L+    ++ +
Sbjct: 726 MNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWR 785

Query: 494 VDYAQRLFNLMQGNGILGDSVIYTSLA 520
              A+ + + M G  +LGD  +   L+
Sbjct: 786 SKEAEIVISEMNGR-MLGDVTVDEDLS 811


>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
          Length = 584

 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 101/335 (30%), Positives = 178/335 (53%), Gaps = 2/335 (0%)

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER 263
           + LI   C          +L EM  +    D+ TY  L+   CK+  + +A+ + D M  
Sbjct: 164 DTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRD 223

Query: 264 EGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEE 321
           +G +PDIVTYN +++G C+EGR+ +A    +++   G  PN V+Y  ++ G C A   E+
Sbjct: 224 KGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWED 283

Query: 322 ALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
           A  L   M  KG  P VVT+N ++  LC++G +  A  +L ++ +   +P++++ N L++
Sbjct: 284 AEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLH 343

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
           A+CK      AM   + M+  G   D  +Y  L+   C++ E+D+A ELL  + D G +P
Sbjct: 344 AFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAP 403

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
              SY+ ++DG       +  L+LL+E VS+GL  D+  Y  +    C++++++ A R F
Sbjct: 404 VLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAF 463

Query: 502 NLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDIL 536
             +Q  GI  ++V+Y ++     +  E  +  D+ 
Sbjct: 464 GKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLF 498



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 102/365 (27%), Positives = 194/365 (53%), Gaps = 10/365 (2%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMT--QDGLQVFDQMRVHNLMPHLHACTVL 171
           +VL+ +++    PD    V+++ ++  A  K +  +  +++ D+MR     P +    V+
Sbjct: 181 AVLDEMLRRRCVPD----VVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVV 236

Query: 172 LNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDV 231
           +N + ++   D   +  K +   G   N   YN+++   C +   +  E+L+ EM  K  
Sbjct: 237 VNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGC 296

Query: 232 RADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARR 291
             ++ T+N LI+  C+KG+   AL V +++ + G SP+ ++YN L+H FC++ +M +A  
Sbjct: 297 PPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKA-M 355

Query: 292 LFRDI---KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
            F D+   +G  P+ V+Y TL+   CR+ +++ A+ L   +  KG  P +++YN+++  L
Sbjct: 356 AFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGL 415

Query: 349 CKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ 408
            K G+ ++A  LLNEM  K + PD +T +T+    C+      A++   ++ + G+  + 
Sbjct: 416 TKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNT 475

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
             Y A+I G CK +E   A +L   M+  G  P+  +Y+ L++G   +   +    LLDE
Sbjct: 476 VLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDE 535

Query: 469 FVSRG 473
             SRG
Sbjct: 536 LCSRG 540



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 112/388 (28%), Positives = 184/388 (47%), Gaps = 2/388 (0%)

Query: 166 HACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCE 225
           + C  L+  L     T     V  +M++   V ++  Y +L+ A CK S   +  KLL E
Sbjct: 161 YTCDTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDE 220

Query: 226 MEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGR 285
           M  K    D+ TYN ++   C++G   +A+     +   G  P+ V+YN ++ G C   R
Sbjct: 221 MRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAER 280

Query: 286 MREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNS 343
             +A  L  ++  KG  PN VT+  LI   CR   +E AL + E +   G  P  ++YN 
Sbjct: 281 WEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNP 340

Query: 344 ILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAG 403
           +L   CK+ ++  A   L+ M  +   PD V+ NTL+ A C+ G+   A+++ +++ + G
Sbjct: 341 LLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKG 400

Query: 404 LMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALL 463
                 +Y  +I G  KA +   A ELL  M+  G  P   +YS +  G C ++  E  +
Sbjct: 401 CAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAI 460

Query: 464 KLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAY 523
           +   +    G+  +  +Y A+I   CK+ +   A  LF  M GNG + +   YT L    
Sbjct: 461 RAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGL 520

Query: 524 WRAGEPKACSDILDDMYRRRLMITLKIY 551
              G  K   D+LD++  R   I L ++
Sbjct: 521 AYEGLIKEARDLLDELCSRGEEILLDVH 548



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 94/365 (25%), Positives = 174/365 (47%), Gaps = 2/365 (0%)

Query: 146 TQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNV 205
           T + L V D+M     +P +   T+LL +  K        K+  +M   G   +I  YNV
Sbjct: 176 TANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNV 235

Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
           +++  C+   VD   + L  +       +  +YN ++   C      +A  +   M ++G
Sbjct: 236 VVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKG 295

Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEAL 323
             P++VT+N LI   CR+G +  A  +   I   G +PN ++Y  L+  +C+   +++A+
Sbjct: 296 CPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAM 355

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
              ++M ++G YP +V+YN++L  LC+ G +  A  LL+++ +K  AP  ++ NT+I+  
Sbjct: 356 AFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGL 415

Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY 443
            K G T  A+++ N M+  GL  D  TY  +  G C+   ++ A      + D G  P+ 
Sbjct: 416 TKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNT 475

Query: 444 CSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNL 503
             Y+ ++ G C +    + + L    +  G   + S Y  LI     +  +  A+ L + 
Sbjct: 476 VLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDE 535

Query: 504 MQGNG 508
           +   G
Sbjct: 536 LCSRG 540



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 91/354 (25%), Positives = 167/354 (47%), Gaps = 7/354 (1%)

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           D+  YN ++A YC  G   +  A +       +  D  T ++LI G C  GR   A  + 
Sbjct: 127 DVMAYNAMMAGYCGAG---QVDAARRWCAERAVERDAYTCDTLIRGLCGRGRTANALAVL 183

Query: 294 RDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
            ++  +   P+ VTYT L++  C+ +  ++A++L + M  KG  P +VTYN ++  +C+E
Sbjct: 184 DEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQE 243

Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
           GR+ DA   L  +      P+ V+ N ++   C       A ++   M + G   +  T+
Sbjct: 244 GRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTF 303

Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
             LI   C+   ++ A E+L  +   G SP+  SY+ L+  +C +   +  +  LD  VS
Sbjct: 304 NMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVS 363

Query: 472 RGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKA 531
           RG   D+  Y  L+   C+  +VD A  L + ++  G     + Y ++     +AG+ K 
Sbjct: 364 RGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKE 423

Query: 532 CSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLF--WSHVVDRGLMSKHIF 583
             ++L++M  + L   +  Y + +A   +++ I D    +  V D G+    + 
Sbjct: 424 ALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVL 477


>gi|326511761|dbj|BAJ92025.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 489

 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 101/301 (33%), Positives = 173/301 (57%), Gaps = 4/301 (1%)

Query: 144 KMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLY 203
           K++Q  L  F  MR H L+P + +C V +++    +  ++    +++M +  +  N++  
Sbjct: 141 KLSQATL-TFRAMRAHGLLPRVESCNVFISAALCLKRPEIAVSFFREMRRCRISPNMYTA 199

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK-GMHYEALAVQDRME 262
           N+L+ A C    V     +L EM    V   + ++NTLIA YC++ G    AL ++ RME
Sbjct: 200 NMLLRAFCALGRVADAAMVLDEMPDWGVDRTVVSFNTLIAAYCREHGGLEHALELKKRME 259

Query: 263 REGISPDIVTYNSLIHGFCREGRMREARRLFRDIKG--ATPNHVTYTTLIDGYCRANDLE 320
            EG++P  +TYN++IHG C+EGRMR+A RL  +++     PN VT+ TLI GY    D  
Sbjct: 260 LEGLTPSELTYNTIIHGLCKEGRMRQANRLLSEMRAMRVVPNTVTFNTLIYGYVMHGDNG 319

Query: 321 EALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLI 380
              R+ E M  KGV   +VTYN+++  LC++G+I+ A  L  +++  K+ P+  T + LI
Sbjct: 320 TTSRVHEEMVKKGVELDIVTYNALILGLCRDGKIKKAEHLFQQLDRPKLEPNASTFSALI 379

Query: 381 NAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFS 440
             +CK  ++  A+++ N M ++G   +  TYK +I  FCK K+ + A +++  +L+   +
Sbjct: 380 LGHCKTQNSERALQLLNVMKKSGFHPNYDTYKIVISTFCKNKDFEGAVDVMKELLEMRMA 439

Query: 441 P 441
           P
Sbjct: 440 P 440



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/308 (34%), Positives = 158/308 (51%), Gaps = 7/308 (2%)

Query: 195 GVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLI-ALYCKKGMHYE 253
           G  A     +VL  AC + + + +       M    +   + + N  I A  C K     
Sbjct: 121 GTGAAAPAIDVLFSACARGNKLSQATLTFRAMRAHGLLPRVESCNVFISAALCLKRPEI- 179

Query: 254 ALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLID 311
           A++    M R  ISP++ T N L+  FC  GR+ +A  +  ++   G     V++ TLI 
Sbjct: 180 AVSFFREMRRCRISPNMYTANMLLRAFCALGRVADAAMVLDEMPDWGVDRTVVSFNTLIA 239

Query: 312 GYCRAND-LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIA 370
            YCR +  LE AL L++ M  +G+ P  +TYN+I+  LCKEGR+R ANRLL+EM   ++ 
Sbjct: 240 AYCREHGGLEHALELKKRMELEGLTPSELTYNTIIHGLCKEGRMRQANRLLSEMRAMRVV 299

Query: 371 PDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL 430
           P+ VT NTLI  Y   GD  +  +V   M++ G+ LD  TY ALI G C+  ++  A E 
Sbjct: 300 PNTVTFNTLIYGYVMHGDNGTTSRVHEEMVKKGVELDIVTYNALILGLCRDGKIKKA-EH 358

Query: 431 LFGMLD-AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFC 489
           LF  LD     P+  ++S L+ G+C   N E  L+LL+     G   +   Y+ +I  FC
Sbjct: 359 LFQQLDRPKLEPNASTFSALILGHCKTQNSERALQLLNVMKKSGFHPNYDTYKIVISTFC 418

Query: 490 KKEKVDYA 497
           K +  + A
Sbjct: 419 KNKDFEGA 426



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 96/357 (26%), Positives = 166/357 (46%), Gaps = 8/357 (2%)

Query: 167 ACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA--CCKSSDVDKVEKLLC 224
           A  VL ++ A+          ++ M   G++  +   NV I A  C K  ++        
Sbjct: 128 AIDVLFSACARGNKLSQATLTFRAMRAHGLLPRVESCNVFISAALCLKRPEI--AVSFFR 185

Query: 225 EMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCRE- 283
           EM    +  +++T N L+  +C  G   +A  V D M   G+   +V++N+LI  +CRE 
Sbjct: 186 EMRRCRISPNMYTANMLLRAFCALGRVADAAMVLDEMPDWGVDRTVVSFNTLIAAYCREH 245

Query: 284 GRMREARRLFR--DIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTY 341
           G +  A  L +  +++G TP+ +TY T+I G C+   + +A RL   M A  V P  VT+
Sbjct: 246 GGLEHALELKKRMELEGLTPSELTYNTIIHGLCKEGRMRQANRLLSEMRAMRVVPNTVTF 305

Query: 342 NSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLE 401
           N+++      G     +R+  EM +K +  D VT N LI   C+ G    A  +  ++  
Sbjct: 306 NTLIYGYVMHGDNGTTSRVHEEMVKKGVELDIVTYNALILGLCRDGKIKKAEHLFQQLDR 365

Query: 402 AGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEA 461
             L  +  T+ ALI G CK +  + A +LL  M  +GF P+Y +Y  ++  +C   + E 
Sbjct: 366 PKLEPNASTFSALILGHCKTQNSERALQLLNVMKKSGFHPNYDTYKIVISTFCKNKDFEG 425

Query: 462 LLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTS 518
            + ++ E +   +  D  +         K +K+  A+ L +    +G    S+ YT 
Sbjct: 426 AVDVMKELLEMRMAPDKVLLHEFFEALSKAKKLHLAEDLQS-ADKSGKFIPSIYYTG 481



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 62/232 (26%), Positives = 112/232 (48%), Gaps = 1/232 (0%)

Query: 334 VYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKI-GDTASA 392
           + P + T N +LR  C  GR+ DA  +L+EM +  +    V+ NTLI AYC+  G    A
Sbjct: 192 ISPNMYTANMLLRAFCALGRVADAAMVLDEMPDWGVDRTVVSFNTLIAAYCREHGGLEHA 251

Query: 393 MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
           +++K RM   GL   + TY  +IHG CK   M  A  LL  M      P+  +++ L+ G
Sbjct: 252 LELKKRMELEGLTPSELTYNTIIHGLCKEGRMRQANRLLSEMRAMRVVPNTVTFNTLIYG 311

Query: 453 YCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGD 512
           Y    +     ++ +E V +G+ +D+  Y ALI   C+  K+  A+ LF  +    +  +
Sbjct: 312 YVMHGDNGTTSRVHEEMVKKGVELDIVTYNALILGLCRDGKIKKAEHLFQQLDRPKLEPN 371

Query: 513 SVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
           +  +++L   + +    +    +L+ M +         Y+   +++ K+ + 
Sbjct: 372 ASTFSALILGHCKTQNSERALQLLNVMKKSGFHPNYDTYKIVISTFCKNKDF 423



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 61/275 (22%), Positives = 108/275 (39%), Gaps = 36/275 (13%)

Query: 291 RLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
           RL   I+G          L     R N L +A      M A G+ P V + N  +     
Sbjct: 114 RLAAGIRGTGAAAPAIDVLFSACARGNKLSQATLTFRAMRAHGLLPRVESCNVFISAALC 173

Query: 351 EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
             R   A     EM   +I+P+  T N L+ A+C +G          R+ +A ++LD+  
Sbjct: 174 LKRPEIAVSFFREMRRCRISPNMYTANMLLRAFCALG----------RVADAAMVLDE-- 221

Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNE-EALLKLLDEF 469
                                  M D G   +  S++ L+  YC ++   E  L+L    
Sbjct: 222 -----------------------MPDWGVDRTVVSFNTLIAAYCREHGGLEHALELKKRM 258

Query: 470 VSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEP 529
              GL      Y  +I   CK+ ++  A RL + M+   ++ ++V + +L Y Y   G+ 
Sbjct: 259 ELEGLTPSELTYNTIIHGLCKEGRMRQANRLLSEMRAMRVVPNTVTFNTLIYGYVMHGDN 318

Query: 530 KACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
              S + ++M ++ + + +  Y +      +D +I
Sbjct: 319 GTTSRVHEEMVKKGVELDIVTYNALILGLCRDGKI 353


>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
          Length = 1205

 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 119/451 (26%), Positives = 228/451 (50%), Gaps = 28/451 (6%)

Query: 50  LYNC-CHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRD 108
           L NC CH+  ++  F   A+     Y     +  T+I  L      K A +  +K+  + 
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 159

Query: 109 F----LSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPH 164
           F    +S  +++N + KI D                     T+  +++  ++      P+
Sbjct: 160 FQLNQVSYGTLINGVCKIGD---------------------TRAAIKLLQKIDGRLTKPN 198

Query: 165 LHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLC 224
           +   + ++++L K +L    + ++ +M   G+ A++  Y+ LI+  C    + +   LL 
Sbjct: 199 VVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLN 258

Query: 225 EMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREG 284
           EM  K +  +++TYN L+   CK+G   EA +V   M +  + PD++TY++L+ G+    
Sbjct: 259 EMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVY 318

Query: 285 RMREARRLFR--DIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYN 342
            +++A+ +F    + G TP+  TYT LI+G+C+   ++EAL L + M  K + PG+VTY+
Sbjct: 319 EVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYS 378

Query: 343 SILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEA 402
           S++  LCK GRI     L++EM+++    + +T ++LI+  CK G    A+ + N+M + 
Sbjct: 379 SLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQ 438

Query: 403 GLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEAL 462
           G+  + FT+  L+ G CK   +  A+E+   +L  G+  +  +Y+ ++DG+C +   E  
Sbjct: 439 GIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEA 498

Query: 463 LKLLDEFVSRGLCVDVSVYRALIRRFCKKEK 493
           L +L +    G   D   +  +I    KK++
Sbjct: 499 LTMLSKMEDNGCIPDAVTFEIIIIALFKKDE 529



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 118/414 (28%), Positives = 196/414 (47%), Gaps = 2/414 (0%)

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
           +A +K     + +  ++ +  + P L    +L+N           + V  K+++ G   +
Sbjct: 69  FAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPD 128

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
               N LI   C    V K      ++  +  + +  +Y TLI   CK G    A+ +  
Sbjct: 129 TVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLQ 188

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRAN 317
           +++     P++V Y+++I   C+   + EA  LF +  +KG + + VTY+TLI G+C   
Sbjct: 189 KIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEG 248

Query: 318 DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCN 377
            L+EA+ L   M  K + P V TYN ++  LCKEG++++A  +L  M +  + PD +T +
Sbjct: 249 KLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYS 308

Query: 378 TLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA 437
           TL++ Y  + +   A  V N M   G+  D  TY  LI+GFCK K +D A  L   M   
Sbjct: 309 TLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQK 368

Query: 438 GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYA 497
              P   +YS L+DG C       +  L+DE   RG   +V  Y +LI   CK   +D A
Sbjct: 369 NMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRA 428

Query: 498 QRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIY 551
             LFN M+  GI  ++  +T L     + G  K   ++  D+  +   + +  Y
Sbjct: 429 IALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTY 482



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 106/361 (29%), Positives = 189/361 (52%), Gaps = 2/361 (0%)

Query: 170 VLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFK 229
            L+N + K   T    K+ +K+       N+ +Y+ +I A CK   V +   L  EM  K
Sbjct: 169 TLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVK 228

Query: 230 DVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA 289
            + AD+ TY+TLI  +C +G   EA+ + + M  + I+P++ TYN L+   C+EG+++EA
Sbjct: 229 GISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEA 288

Query: 290 RRLFRDIKGA--TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRK 347
           + +   +  A   P+ +TY+TL+DGY    ++++A  +   M+  GV P V TY  ++  
Sbjct: 289 KSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILING 348

Query: 348 LCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLD 407
            CK   + +A  L  EM++K + P  VT ++LI+  CK G       + + M + G   +
Sbjct: 349 FCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPAN 408

Query: 408 QFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLD 467
             TY +LI G CK   +D A  L   M D G  P+  +++ L+DG C     +   ++  
Sbjct: 409 VITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQ 468

Query: 468 EFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
           + +++G  ++V  Y  +I   CK+  ++ A  + + M+ NG + D+V +  +  A ++  
Sbjct: 469 DLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPDAVTFEIIIIALFKKD 528

Query: 528 E 528
           E
Sbjct: 529 E 529



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 107/342 (31%), Positives = 168/342 (49%), Gaps = 4/342 (1%)

Query: 226 MEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGR 285
           +E K ++ DL T N LI  +C  G      +V  ++ + G  PD VT N+LI G C +G+
Sbjct: 85  LELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQ 144

Query: 286 MREARRLFRD---IKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYN 342
           +++A   F D    +G   N V+Y TLI+G C+  D   A++L + +  +   P VV Y+
Sbjct: 145 VKKALH-FHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYS 203

Query: 343 SILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEA 402
           +I+  LCK   + +A  L +EM  K I+ D VT +TLI  +C  G    A+ + N M+  
Sbjct: 204 TIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLK 263

Query: 403 GLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEAL 462
            +  + +TY  L+   CK  ++  AK +L  ML A   P   +YS L+DGY      +  
Sbjct: 264 TINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKA 323

Query: 463 LKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYA 522
             + +     G+  DV  Y  LI  FCK + VD A  LF  M    ++   V Y+SL   
Sbjct: 324 QHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDG 383

Query: 523 YWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
             ++G      D++D+M+ R     +  Y S      K+  +
Sbjct: 384 LCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHL 425



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 89/309 (28%), Positives = 153/309 (49%), Gaps = 12/309 (3%)

Query: 214  SDVDKVEKLLCEMEFKDVRADLFTYN---TLIALYCK----KGMHYE-ALAVQDRMEREG 265
            +D+D+VE +    E   VR  L       T +  Y +       HY  A+++  R+E +G
Sbjct: 897  ADLDQVEAIHVGFEHGVVRGGLAMAERGVTSVGAYIRIPHNPMKHYSTAVSLSHRLELKG 956

Query: 266  ISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEAL 323
            I PD+ T N LI+ FC  G++     +   I  +G  P+ +T+TTLI+G C    + +AL
Sbjct: 957  IQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKAL 1016

Query: 324  RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
               + + A+G     V+Y +++  +CK G  R A +LL +++ +   PD V  NT+I+A 
Sbjct: 1017 HFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDAL 1076

Query: 384  CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY 443
            CK    + A  +   M   G+  D  TY  LI+GFC   ++  A  LL  M+    +P+ 
Sbjct: 1077 CKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNV 1136

Query: 444  CSYSWLVDGYCNKNNE--EALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
             +Y+ LVD  C +  +  +  L +L +    G   +   +  +I    +K++ D  ++L 
Sbjct: 1137 RTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEKLL 1196

Query: 502  NLMQGNGIL 510
            + M   G+L
Sbjct: 1197 HEMIARGLL 1205



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 123/289 (42%), Gaps = 12/289 (4%)

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
           TP  + +  ++D + +      A+ L   +  KG+ P ++T N ++   C  G+I     
Sbjct: 56  TPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFS 115

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
           +L ++ ++   PD VT NTLI   C  G    A+   +++L  G  L+Q +Y  LI+G C
Sbjct: 116 VLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGVC 175

Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
           K  +   A +LL  +      P+   YS ++D  C          L  E   +G+  DV 
Sbjct: 176 KIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVV 235

Query: 480 VYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
            Y  LI  FC + K+  A  L N M    I  +   Y  L  A  + G+ K    +L  M
Sbjct: 236 TYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVM 295

Query: 540 YRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKEMQL 588
            +  +   +  Y +    Y         F  + V +   ++H+F  M L
Sbjct: 296 LKACVKPDVITYSTLMDGY---------FLVYEVKK---AQHVFNAMSL 332



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 64/206 (31%), Positives = 99/206 (48%), Gaps = 4/206 (1%)

Query: 163  PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
            P     T L+N L      +     + K++  G   N   Y  LI+  CK  D     KL
Sbjct: 994  PDTITFTTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKL 1053

Query: 223  LCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR 282
            L +++ +  + D+  YNT+I   CK  +  +A  +   M  +GIS D+VTYN+LI+GFC 
Sbjct: 1054 LRKIDGRLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCI 1113

Query: 283  EGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRAND--LEEALRLREVMAAKGVYPGV 338
             G+++EA  L     +K   PN  TY  L+D  C+     L+E+L +   M   G     
Sbjct: 1114 VGKLKEAIGLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANA 1173

Query: 339  VTYNSILRKLCKEGRIRDANRLLNEM 364
            VT+  I+  L ++       +LL+EM
Sbjct: 1174 VTFEIIISALFEKDENDKVEKLLHEM 1199



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 91/199 (45%)

Query: 367  KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
            K I PD  T N LIN +C +G       +  ++L+ G   D  T+  LI+G C   +++ 
Sbjct: 955  KGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNK 1014

Query: 427  AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
            A      +L  GF  +  SY  L++G C   +  A +KLL +   R    DV +Y  +I 
Sbjct: 1015 ALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIID 1074

Query: 487  RFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMI 546
              CK + V  A  LF  M   GI  D V Y +L Y +   G+ K    +L+ M  + +  
Sbjct: 1075 ALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINP 1134

Query: 547  TLKIYRSFSASYAKDNEIL 565
             ++ Y     +  K+ + L
Sbjct: 1135 NVRTYNILVDALCKEGKDL 1153


>gi|357504477|ref|XP_003622527.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355497542|gb|AES78745.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 721

 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 143/546 (26%), Positives = 241/546 (44%), Gaps = 69/546 (12%)

Query: 9   SDTKFIKTISAIMLKGHWAKLLNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAE 68
           +++K  KTI+ ++    W+  L  +  +SL+ T + + L ++     +P+ +  FF W  
Sbjct: 54  NNSKTAKTIANLINYKPWSDELLSSFTTSLSKTTVFQTLRHI----KVPTKAFLFFNWIH 109

Query: 69  SAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDG 128
                + H+ Q+++ M+ IL + K+   A+N L  I  R         N  VK+ D    
Sbjct: 110 EK--GFSHNPQTYFIMLEILGREKNLNIARNFLYSIEKRS--------NGEVKLED---- 155

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
                + L+  Y    + ++ +++F+ M++  + P +     +L  L K   T+M  +VY
Sbjct: 156 --RFFNSLIRSYGEAGLFKESVKLFENMKLIGVSPGVVTFNSVLLVLLKRGRTNMAKEVY 213

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
            +M++                                     V+ D +TYN LI  +CK 
Sbjct: 214 DEMLKT----------------------------------YGVKPDTYTYNILIRGFCKN 239

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF----RDIKGATPNHV 304
            M  E       M      PD+VTYN+L+ G CR G+++ A  L     +  K  +P+ V
Sbjct: 240 SMVDEGFYFFKEMTSFDCDPDVVTYNTLVDGLCRAGKIKVAHNLVNGMSKKCKDLSPDVV 299

Query: 305 TYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM 364
           TYTTLI GYCR  +++EAL + E M  +G+ P +VTYN++++ LC+  +      +L +M
Sbjct: 300 TYTTLIRGYCRKQEVDEALDILEEMNGRGLKPNIVTYNTLIKGLCEAQKWDKMKEILEQM 359

Query: 365 -NEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
             +    PD  T NTLIN++C  G+   A KV   M +  +  D  +Y  LI   C+  +
Sbjct: 360 KGDGGSIPDACTFNTLINSHCCAGNLDEAFKVFENMKKLEVSADSASYSVLIRTLCQKGD 419

Query: 424 MDIAKELLFGML--------DAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLC 475
              A E+LF  L          G  P   SY  +    C     +   ++L + + RG  
Sbjct: 420 YGKA-EMLFDELFEKEILLSSYGPKPLAASYKCMFQYLCENGKTKKAERVLRQLMKRG-T 477

Query: 476 VDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDI 535
            D   Y+ +I   CK+   +    L   M     L D  IY  L   + R  +P    + 
Sbjct: 478 QDPLSYQIVILGHCKEGSYENGYGLLVWMLRRDFLPDIDIYDYLIDGFLRKDKPLLAKET 537

Query: 536 LDDMYR 541
           L+ M +
Sbjct: 538 LEKMLK 543



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 71/296 (23%), Positives = 132/296 (44%), Gaps = 28/296 (9%)

Query: 157 RVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDV 216
           +  +L P +   T L+    + +  D    + ++M   G+  NI  YN LI   C++   
Sbjct: 290 KCKDLSPDVVTYTTLIRGYCRKQEVDEALDILEEMNGRGLKPNIVTYNTLIKGLCEAQKW 349

Query: 217 DKVEKLLCEMEFKDVR-ADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNS 275
           DK++++L +M+       D  T+NTLI  +C  G   EA  V + M++  +S D  +Y+ 
Sbjct: 350 DKMKEILEQMKGDGGSIPDACTFNTLINSHCCAGNLDEAFKVFENMKKLEVSADSASYSV 409

Query: 276 LIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVY 335
           LI   C++G   +A  LF                          +E      ++++ G  
Sbjct: 410 LIRTLCQKGDYGKAEMLF--------------------------DELFEKEILLSSYGPK 443

Query: 336 PGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKV 395
           P   +Y  + + LC+ G+ + A R+L ++  K+   D ++   +I  +CK G   +   +
Sbjct: 444 PLAASYKCMFQYLCENGKTKKAERVLRQL-MKRGTQDPLSYQIVILGHCKEGSYENGYGL 502

Query: 396 KNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVD 451
              ML    + D   Y  LI GF +  +  +AKE L  ML + + P   ++  +++
Sbjct: 503 LVWMLRRDFLPDIDIYDYLIDGFLRKDKPLLAKETLEKMLKSSYKPQTSTWHSILN 558



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 101/430 (23%), Positives = 167/430 (38%), Gaps = 73/430 (16%)

Query: 80  SHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIF 139
           ++ T+I    + +    A ++LE++  R         N L+K      G      W  + 
Sbjct: 300 TYTTLIRGYCRKQEVDEALDILEEMNGRGLKPNIVTYNTLIK------GLCEAQKWDKMK 353

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
               +M  DG  + D    + L+ + H C   L         D  +KV++ M +L V A+
Sbjct: 354 EILEQMKGDGGSIPDACTFNTLI-NSHCCAGNL---------DEAFKVFENMKKLEVSAD 403

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY-------CKKGMHY 252
              Y+VLI   C+  D  K E L  E+  K++    +    L A Y       C+ G   
Sbjct: 404 SASYSVLIRTLCQKGDYGKAEMLFDELFEKEILLSSYGPKPLAASYKCMFQYLCENGKTK 463

Query: 253 EALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF-----RDIKGATPNHVTYT 307
           +A  V  ++ + G + D ++Y  +I G C+EG       L      RD     P+   Y 
Sbjct: 464 KAERVLRQLMKRG-TQDPLSYQIVILGHCKEGSYENGYGLLVWMLRRDF---LPDIDIYD 519

Query: 308 TLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEK 367
            LIDG+ R +    A    E M      P   T++SIL +L ++G + ++  ++  M E+
Sbjct: 520 YLIDGFLRKDKPLLAKETLEKMLKSSYKPQTSTWHSILNRLLEQGCVHESAGVIVMMLER 579

Query: 368 KIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIH--GFC------ 419
            I   N+  +T               K    + + GL    F    LI+  GFC      
Sbjct: 580 NIR-QNINFST---------------KCLQLLFDRGLQDKAFKITELIYKNGFCVKMDEV 623

Query: 420 ------KAKEMDIAKELLFGM-----LDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
                 K + ++  K LLF +     +D G        + ++   C  N       L  E
Sbjct: 624 VQFLCNKRRALEACKLLLFSLKNNENIDIGLC------NIVILDLCKLNKASEAFSLCYE 677

Query: 469 FVSRGLCVDV 478
            V +GL  D+
Sbjct: 678 LVDKGLHQDL 687



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 57/229 (24%), Positives = 97/229 (42%), Gaps = 6/229 (2%)

Query: 332 KGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEK---KIAPDNVTCNTLINAYCKIGD 388
           KG      TY  +L  L +E  +  A   L  + ++   ++  ++   N+LI +Y + G 
Sbjct: 111 KGFSHNPQTYFIMLEILGREKNLNIARNFLYSIEKRSNGEVKLEDRFFNSLIRSYGEAGL 170

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA-GFSPSYCSYS 447
              ++K+   M   G+     T+ +++    K    ++AKE+   ML   G  P   +Y+
Sbjct: 171 FKESVKLFENMKLIGVSPGVVTFNSVLLVLLKRGRTNMAKEVYDEMLKTYGVKPDTYTYN 230

Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM--Q 505
            L+ G+C  +  +       E  S     DV  Y  L+   C+  K+  A  L N M  +
Sbjct: 231 ILIRGFCKNSMVDEGFYFFKEMTSFDCDPDVVTYNTLVDGLCRAGKIKVAHNLVNGMSKK 290

Query: 506 GNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSF 554
              +  D V YT+L   Y R  E     DIL++M  R L   +  Y + 
Sbjct: 291 CKDLSPDVVTYTTLIRGYCRKQEVDEALDILEEMNGRGLKPNIVTYNTL 339



 Score = 42.4 bits (98), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 38/161 (23%), Positives = 68/161 (42%), Gaps = 4/161 (2%)

Query: 407 DQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLL 466
           D+F + +LI  + +A     + +L   M   G SP   +++ ++     +       ++ 
Sbjct: 155 DRF-FNSLIRSYGEAGLFKESVKLFENMKLIGVSPGVVTFNSVLLVLLKRGRTNMAKEVY 213

Query: 467 DEFV-SRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWR 525
           DE + + G+  D   Y  LIR FCK   VD     F  M       D V Y +L     R
Sbjct: 214 DEMLKTYGVKPDTYTYNILIRGFCKNSMVDEGFYFFKEMTSFDCDPDVVTYNTLVDGLCR 273

Query: 526 AGEPKACSDILDDMYR--RRLMITLKIYRSFSASYAKDNEI 564
           AG+ K   ++++ M +  + L   +  Y +    Y +  E+
Sbjct: 274 AGKIKVAHNLVNGMSKKCKDLSPDVVTYTTLIRGYCRKQEV 314


>gi|255584218|ref|XP_002532847.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527384|gb|EEF29525.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 505

 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 132/489 (26%), Positives = 225/489 (46%), Gaps = 58/489 (11%)

Query: 79  QSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTP--SVLNALVKIHDD-----PDGNSH 131
           QS + ++H L K       Q++L +I L + +S+P  +V + L  + +      P  +S 
Sbjct: 26  QSVFFIVHYLLKFNLKSEVQSLLLQI-LSNRISSPFFTVSSLLENLTEPISIPCPKISSL 84

Query: 132 VLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKK- 190
           +   ++  Y      +  +  F+QM    L+   +    LL+SL K +  + +W V+ + 
Sbjct: 85  LYESIISVYIQSGSIELAVLYFNQMVDKGLVFEPNIFNTLLDSLVKSKCFEKLWFVFNEV 144

Query: 191 ---------------------------------MVQLGVVANIHLYNVLIHACCKSSDVD 217
                                            + ++G+  N+ +Y  LI  CCK+ DV 
Sbjct: 145 KGKIELDVYTYGIMIKGCCEAGVFYKGFELLTDLEKMGLSPNVVIYTTLIDGCCKNGDVR 204

Query: 218 KVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLI 277
           + + L  +M   ++ A+ +TY  LI  + KKG+  +   + ++M+ +G+ P++ TYN +I
Sbjct: 205 RAKLLFNKMGEVNLVANQYTYTVLINGFFKKGLRKDGFELFEKMQLDGVFPNLYTYNCMI 264

Query: 278 HGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVY 335
           + FC EG++ +A  LF ++  +G   N VTY TLI G CR   + EA +L + M   G  
Sbjct: 265 NEFCNEGKLHKAYELFDEMCKRGVVSNVVTYNTLISGLCRKTRIWEAEKLVDQMKRAGYS 324

Query: 336 PGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKV 395
            G              G   D   L+ EM E+ I+P  VT   L NA+ ++GD   A   
Sbjct: 325 NG--------------GNWVDVTDLVREMEERGISPSKVTYTILTNAHVRLGDMEKAFHF 370

Query: 396 KNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCN 455
            + M + GL+ D   Y  L+HG C    M  A +L   M +    P+   Y+ +++GYC 
Sbjct: 371 YSSMEKVGLVPDVHIYGVLLHGLCVKGNMKEASKLFRSMAEMKLEPNEVVYNTMINGYCK 430

Query: 456 KNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVI 515
             N    L+ L E   + L  +V+ Y + I   CK  K   A+ L N M+G+G+     I
Sbjct: 431 AGNSFRALRFLKEMEDKRLVPNVASYSSTIGILCKDGKWQEAEILLNKMRGSGLEPSVSI 490

Query: 516 YTSLAYAYW 524
           Y  ++ A +
Sbjct: 491 YNIISKAKY 499



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 105/378 (27%), Positives = 182/378 (48%), Gaps = 17/378 (4%)

Query: 188 YKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCK 247
           + +MV  G+V   +++N L+ +  KS   +K+  +  E++ K +  D++TY  +I   C+
Sbjct: 106 FNQMVDKGLVFEPNIFNTLLDSLVKSKCFEKLWFVFNEVKGK-IELDVYTYGIMIKGCCE 164

Query: 248 KGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGA--TPNHVT 305
            G+ Y+   +   +E+ G+SP++V Y +LI G C+ G +R A+ LF  +       N  T
Sbjct: 165 AGVFYKGFELLTDLEKMGLSPNVVIYTTLIDGCCKNGDVRRAKLLFNKMGEVNLVANQYT 224

Query: 306 YTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMN 365
           YT LI+G+ +    ++   L E M   GV+P + TYN ++ + C EG++  A  L +EM 
Sbjct: 225 YTVLINGFFKKGLRKDGFELFEKMQLDGVFPNLYTYNCMINEFCNEGKLHKAYELFDEMC 284

Query: 366 EKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMD 425
           ++ +  + VT NTLI+  C+          K R+ EA  ++DQ       +G       D
Sbjct: 285 KRGVVSNVVTYNTLISGLCR----------KTRIWEAEKLVDQMKRAGYSNGGNWVDVTD 334

Query: 426 IAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
           + +E    M + G SPS  +Y+ L + +    + E            GL  DV +Y  L+
Sbjct: 335 LVRE----MEERGISPSKVTYTILTNAHVRLGDMEKAFHFYSSMEKVGLVPDVHIYGVLL 390

Query: 486 RRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
              C K  +  A +LF  M    +  + V+Y ++   Y +AG        L +M  +RL+
Sbjct: 391 HGLCVKGNMKEASKLFRSMAEMKLEPNEVVYNTMINGYCKAGNSFRALRFLKEMEDKRLV 450

Query: 546 ITLKIYRSFSASYAKDNE 563
             +  Y S      KD +
Sbjct: 451 PNVASYSSTIGILCKDGK 468



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/236 (23%), Positives = 102/236 (43%), Gaps = 1/236 (0%)

Query: 306 YTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMN 365
           Y ++I  Y ++  +E A+     M  KG+      +N++L  L K         + NE+ 
Sbjct: 86  YESIISVYIQSGSIELAVLYFNQMVDKGLVFEPNIFNTLLDSLVKSKCFEKLWFVFNEV- 144

Query: 366 EKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMD 425
           + KI  D  T   +I   C+ G      ++   + + GL  +   Y  LI G CK  ++ 
Sbjct: 145 KGKIELDVYTYGIMIKGCCEAGVFYKGFELLTDLEKMGLSPNVVIYTTLIDGCCKNGDVR 204

Query: 426 IAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
            AK L   M +     +  +Y+ L++G+  K   +   +L ++    G+  ++  Y  +I
Sbjct: 205 RAKLLFNKMGEVNLVANQYTYTVLINGFFKKGLRKDGFELFEKMQLDGVFPNLYTYNCMI 264

Query: 486 RRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
             FC + K+  A  LF+ M   G++ + V Y +L     R         ++D M R
Sbjct: 265 NEFCNEGKLHKAYELFDEMCKRGVVSNVVTYNTLISGLCRKTRIWEAEKLVDQMKR 320



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/224 (24%), Positives = 93/224 (41%), Gaps = 1/224 (0%)

Query: 341 YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML 400
           Y SI+    + G I  A    N+M +K +  +    NTL+++  K         V N  +
Sbjct: 86  YESIISVYIQSGSIELAVLYFNQMVDKGLVFEPNIFNTLLDSLVKSKCFEKLWFVFNE-V 144

Query: 401 EAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEE 460
           +  + LD +TY  +I G C+A       ELL  +   G SP+   Y+ L+DG C   +  
Sbjct: 145 KGKIELDVYTYGIMIKGCCEAGVFYKGFELLTDLEKMGLSPNVVIYTTLIDGCCKNGDVR 204

Query: 461 ALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLA 520
               L ++     L  +   Y  LI  F KK        LF  MQ +G+  +   Y  + 
Sbjct: 205 RAKLLFNKMGEVNLVANQYTYTVLINGFFKKGLRKDGFELFEKMQLDGVFPNLYTYNCMI 264

Query: 521 YAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
             +   G+     ++ D+M +R ++  +  Y +  +   +   I
Sbjct: 265 NEFCNEGKLHKAYELFDEMCKRGVVSNVVTYNTLISGLCRKTRI 308


>gi|242047668|ref|XP_002461580.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
 gi|241924957|gb|EER98101.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
          Length = 532

 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 119/381 (31%), Positives = 184/381 (48%), Gaps = 4/381 (1%)

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG--VVANIHLYNVLIHACCKSSDVDKVE 220
           P + + TVLL  L  ++  +    +   M + G     N+  Y  +IH   K  +V K  
Sbjct: 82  PDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSYTTVIHGFFKEDEVGKAY 141

Query: 221 KLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGF 280
            L CEM  + +  D+ T N++I   CK     +A  V  +M  + I PD  TYNSL+HG+
Sbjct: 142 TLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDKHIMPDCTTYNSLVHGY 201

Query: 281 CREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGV 338
              G+++EA R+ + +   G  PN VTY+ LID  C+     EA  +   M      P V
Sbjct: 202 LSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTEAREILNSMIQSRGNPNV 261

Query: 339 VTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNR 398
            TY  +L     +G + + N L++ M +  + PD+   N  I AY K G    AM   N+
Sbjct: 262 ATYGGLLHGYATKGDLVEMNNLIDLMVQNGVRPDHHIFNIQIYAYVKCGRLDEAMLTFNK 321

Query: 399 MLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNN 458
           M + GLM D  +Y  +I G CK   +D A      M+D G SP    ++ L+ G+     
Sbjct: 322 MRQQGLMPDIISYGTMIDGLCKIGRLDAAMSQFCQMIDDGLSPDIVVFTNLIHGFSMYGK 381

Query: 459 EEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTS 518
            E   +L  E + RG+   V V+  +I +  K+ KV  A+ LF+LM    +  + V Y +
Sbjct: 382 WEKAEELFYEMMDRGIRPTVVVFTTMIDKLFKEGKVTEAKTLFDLMPIASVKPNVVSYNA 441

Query: 519 LAYAYWRAGEPKACSDILDDM 539
           + + Y+ AG+      +LDDM
Sbjct: 442 IIHGYFLAGKLDEVLKLLDDM 462



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 94/410 (22%), Positives = 196/410 (47%), Gaps = 19/410 (4%)

Query: 169 TVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC---KSSDVDKV-----E 220
           T+L++        ++ +    ++++ G+ AN   +  ++   C   ++SD   +      
Sbjct: 17  TILISCCCYVGCLNLAFAALGQIIKTGLRANAISFTPILRTLCAEKRTSDAMNIVIRWTP 76

Query: 221 KLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG--ISPDIVTYNSLIH 278
           KL C         D+F+Y  L+   C +    EA+ +   M  +G    P++V+Y ++IH
Sbjct: 77  KLGC-------TPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSYTTVIH 129

Query: 279 GFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYP 336
           GF +E  + +A  LF ++  +G  P+ VT  ++IDG C+   +++A  +   M  K + P
Sbjct: 130 GFFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDKHIMP 189

Query: 337 GVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVK 396
              TYNS++      G++++A R+L +M+     P+ VT + LI+  CK G    A ++ 
Sbjct: 190 DCTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTEAREIL 249

Query: 397 NRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNK 456
           N M+++    +  TY  L+HG+    ++     L+  M+  G  P +  ++  +  Y   
Sbjct: 250 NSMIQSRGNPNVATYGGLLHGYATKGDLVEMNNLIDLMVQNGVRPDHHIFNIQIYAYVKC 309

Query: 457 NNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIY 516
              +  +   ++   +GL  D+  Y  +I   CK  ++D A   F  M  +G+  D V++
Sbjct: 310 GRLDEAMLTFNKMRQQGLMPDIISYGTMIDGLCKIGRLDAAMSQFCQMIDDGLSPDIVVF 369

Query: 517 TSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
           T+L + +   G+ +   ++  +M  R +  T+ ++ +      K+ ++ +
Sbjct: 370 TNLIHGFSMYGKWEKAEELFYEMMDRGIRPTVVVFTTMIDKLFKEGKVTE 419



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 73/274 (26%), Positives = 129/274 (47%), Gaps = 20/274 (7%)

Query: 108 DFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHA 167
           D +   ++++ +V+    PD   H+ +  +  Y       + +  F++MR   LMP + +
Sbjct: 276 DLVEMNNLIDLMVQNGVRPD--HHIFNIQIYAYVKCGRLDEAMLTFNKMRQQGLMPDIIS 333

Query: 168 CTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEME 227
              +++ L K    D     + +M+  G+  +I ++  LIH        +K E+L  EM 
Sbjct: 334 YGTMIDGLCKIGRLDAAMSQFCQMIDDGLSPDIVVFTNLIHGFSMYGKWEKAEELFYEMM 393

Query: 228 FKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMR 287
            + +R  +  + T+I    K+G   EA  + D M    + P++V+YN++IHG+   G++ 
Sbjct: 394 DRGIRPTVVVFTTMIDKLFKEGKVTEAKTLFDLMPIASVKPNVVSYNAIIHGYFLAGKLD 453

Query: 288 EARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSIL 345
           E  +L  D+   G  PN VT+ TL+D                 M + G+ P V T N+++
Sbjct: 454 EVLKLLDDMLSVGLKPNAVTFNTLLDD----------------MLSMGLKPDVATCNTLI 497

Query: 346 RKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTL 379
              C++GRI D   L  EM  K    D VT N +
Sbjct: 498 DSCCEDGRIEDVLTLFREMLSKAAKTDTVTENII 531



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 70/297 (23%), Positives = 120/297 (40%), Gaps = 5/297 (1%)

Query: 297 KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRD 356
           K   P  VTYT LI   C    L  A      +   G+    +++  ILR LC E R  D
Sbjct: 7   KKVAPTTVTYTILISCCCYVGCLNLAFAALGQIIKTGLRANAISFTPILRTLCAEKRTSD 66

Query: 357 ANRLLNEMNEK-KIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAG--LMLDQFTYKA 413
           A  ++     K    PD  +   L+   C       A+ + + M E G     +  +Y  
Sbjct: 67  AMNIVIRWTPKLGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSYTT 126

Query: 414 LIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
           +IHGF K  E+  A  L   MLD G  P   + + ++DG C     +   ++L +   + 
Sbjct: 127 VIHGFFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDKH 186

Query: 474 LCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACS 533
           +  D + Y +L+  +    ++  A R+   M  +G   + V Y+ L     + G      
Sbjct: 187 IMPDCTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTEAR 246

Query: 534 DILDDMYRRRLMITLKIYRSFSASYAKDNEILDL--FWSHVVDRGLMSKHIFKEMQL 588
           +IL+ M + R    +  Y      YA   +++++      +V  G+   H    +Q+
Sbjct: 247 EILNSMIQSRGNPNVATYGGLLHGYATKGDLVEMNNLIDLMVQNGVRPDHHIFNIQI 303


>gi|302784788|ref|XP_002974166.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
 gi|300158498|gb|EFJ25121.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
          Length = 647

 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 127/423 (30%), Positives = 204/423 (48%), Gaps = 11/423 (2%)

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
           P + A TV++N L +++  D  + V ++ V+ G   +   YNV I   CK+  VD   +L
Sbjct: 39  PDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQL 98

Query: 223 LCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR 282
           L +M+ K       TY  L+    K G   EA+A+ ++M  +G SP + TY  +I G  +
Sbjct: 99  LKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSK 158

Query: 283 EGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEAL----RLREVMAAKGVYP 336
            GR+ EARR+F D+   G  P+   YT LI G  +   L+EAL    ++ E   A+GV P
Sbjct: 159 AGRVEEARRIFVDMLGNGCRPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEP 218

Query: 337 GVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVK 396
            VV +N ++R+LC  G + DA    +E+++  +   + T N L+ A CK   T  A+   
Sbjct: 219 DVVIHNLVIRQLCASGNLEDALAYFDELDD-SLDLTHFTFNPLVAALCKAERTEEAIAFV 277

Query: 397 NRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNK 456
            +M E       FTY +L+ GF K   +D A   L   ++ GF P   +Y+ ++DG C  
Sbjct: 278 KKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKL 337

Query: 457 NNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIY 516
              E   +   E  +RG   D   Y ALI  F K + +  A R++  M  +G +  +V Y
Sbjct: 338 GRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTY 397

Query: 517 TSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI---LDLFWSHVV 573
             +     +AG           M  R  + T+  Y +    +  +  +   ++LF   ++
Sbjct: 398 NIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELF-RRML 456

Query: 574 DRG 576
           DRG
Sbjct: 457 DRG 459



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 120/446 (26%), Positives = 193/446 (43%), Gaps = 7/446 (1%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           SVL   V+   +PD  ++  +  +      +   D  Q+  +M     +P     T L++
Sbjct: 62  SVLERAVRAGCEPDYVTY--NVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVD 119

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
            L K    D    + ++MV+ G    +  Y V+I    K+  V++  ++  +M     R 
Sbjct: 120 GLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRP 179

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMER----EGISPDIVTYNSLIHGFCREGRMREA 289
           D F Y  LI+   K G   EAL   ++M       G+ PD+V +N +I   C  G + +A
Sbjct: 180 DAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDA 239

Query: 290 RRLFRDIKGATP-NHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
              F ++  +    H T+  L+   C+A   EEA+   + M+ +  +P + TY S++   
Sbjct: 240 LAYFDELDDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGF 299

Query: 349 CKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ 408
            K GR+ +A   L E  E+   PD VT  ++I+  CK+G      +  + M   G   D 
Sbjct: 300 LKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDA 359

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
            TY ALI GF KAK +  A  +   ML +G   S  +Y+ ++DG C              
Sbjct: 360 VTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLA 419

Query: 469 FVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
              RG    V  Y AL+  FC +  V  A  LF  M   G   + V Y  +     RAG+
Sbjct: 420 MEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGK 479

Query: 529 PKACSDILDDMYRRRLMITLKIYRSF 554
                   + + +RRL   +  + SF
Sbjct: 480 LAKAYFYFEKLLQRRLCPDVYTFNSF 505



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 126/476 (26%), Positives = 207/476 (43%), Gaps = 27/476 (5%)

Query: 128 GNSHVLSWLVIFYANLK---MTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMV 184
           GNS  L    +    L      ++  ++F  M  +   P     T L++ LAK    D  
Sbjct: 141 GNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALISGLAKIGKLDEA 200

Query: 185 WKVYKKMVQ----LGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADL--FTY 238
                +MV+     GV  ++ ++N++I   C S ++   E  L   +  D   DL  FT+
Sbjct: 201 LVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNL---EDALAYFDELDDSLDLTHFTF 257

Query: 239 NTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI-- 296
           N L+A  CK     EA+A   +M      P + TY SL+ GF + GR+ EA    ++   
Sbjct: 258 NPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVE 317

Query: 297 KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRD 356
           +G  P+ VTYT++IDG C+   +EE       M  +G  P  VTY +++    K   I  
Sbjct: 318 RGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPK 377

Query: 357 ANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIH 416
           A+R+  +M +       VT N +++  CK G  A A      M E G +    TY AL+ 
Sbjct: 378 AHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMD 437

Query: 417 GFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCV 476
           GFC    +  A EL   MLD G  P+  SY+ ++ G C            ++ + R LC 
Sbjct: 438 GFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCP 497

Query: 477 DVSVYRALIRRFCKK-EKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDI 535
           DV  + + +   C++ + V     LF  M   G   +   Y+ L     RAG  +   +I
Sbjct: 498 DVYTFNSFLHGLCQRLDTVGDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEI 557

Query: 536 LDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKEMQLRNS 591
             +M  R +   + ++ +             + W  +  R   +  +F+E++ R++
Sbjct: 558 FHEMVSRGVAPDVVVFNTL------------IRWLCIAGRVDEALEVFRELERRSA 601



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 100/415 (24%), Positives = 189/415 (45%), Gaps = 7/415 (1%)

Query: 100 MLEKIALRDFLSTPSVLNALV---KIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQM 156
           ++  + +R   ++ ++ +AL    ++ D  D      + LV      + T++ +    +M
Sbjct: 221 VIHNLVIRQLCASGNLEDALAYFDELDDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKM 280

Query: 157 RVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDV 216
                 P L   T L++   K    D      K+ V+ G + +   Y  +I   CK   V
Sbjct: 281 SERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRV 340

Query: 217 DKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSL 276
           ++  +   EM  +    D  TY  LI  + K  M  +A  V  +M + G     VTYN +
Sbjct: 341 EEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNII 400

Query: 277 IHGFCREGRMREARRLF--RDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGV 334
           + G C+ GR+ EA   F   + +G     VTY+ L+DG+C   ++  A+ L   M  +G 
Sbjct: 401 LDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGC 460

Query: 335 YPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT-ASAM 393
            P +V+YN I+R LC+ G++  A     ++ ++++ PD  T N+ ++  C+  DT    +
Sbjct: 461 EPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDTVGDGV 520

Query: 394 KVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGY 453
           ++   M+  G   +  +Y  L+ G C+A  +++  E+   M+  G +P    ++ L+   
Sbjct: 521 ELFESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLIRWL 580

Query: 454 CNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG 508
           C     +  L++  E   R    D   Y +L+    + E+++ A+ L   M+  G
Sbjct: 581 CIAGRVDEALEVFRELERRS-APDAWSYWSLLDALSRCERMEEARLLSFHMKLQG 634



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 91/322 (28%), Positives = 146/322 (45%), Gaps = 12/322 (3%)

Query: 269 DIVTYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
           D     +L++G C+ G++  A  L  ++   +P+ V +T +I+G CR   L+EA  + E 
Sbjct: 8   DTRVCTALLNGLCKTGQLDRAMLLLDEMP-CSPDMVAFTVVINGLCREKRLDEAFSVLER 66

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
               G  P  VTYN  +  LCK  R+ DA +LL +M+EKK  P  VT   L++   K G 
Sbjct: 67  AVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGR 126

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
              AM +  +M+E G      TY  +I G  KA  ++ A+ +   ML  G  P    Y+ 
Sbjct: 127 LDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTA 186

Query: 449 LVDGYCNKNNEEALLKLLDEFV----SRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
           L+ G       +  L  L++ V    +RG+  DV ++  +IR+ C    ++ A   F+ +
Sbjct: 187 LISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDEL 246

Query: 505 QGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAK---- 560
             +  L     +  L  A  +A   +     +  M  RR   TL  Y S    + K    
Sbjct: 247 DDSLDL-THFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRL 305

Query: 561 DNEILDLFWSHVVDRGLMSKHI 582
           D  +L L     V+RG +   +
Sbjct: 306 DEALLQL--KEAVERGFIPDAV 325



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 87/288 (30%), Positives = 133/288 (46%), Gaps = 10/288 (3%)

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF-RDIK-GATPNH 303
           CK G    A+ + D M     SPD+V +  +I+G CRE R+ EA  +  R ++ G  P++
Sbjct: 20  CKTGQLDRAMLLLDEMP---CSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDY 76

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
           VTY   IDG C+A  +++A +L + M  K   P  VTY +++  L K GR+ +A  +L +
Sbjct: 77  VTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAILEQ 136

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
           M EK  +P   T   +I+   K G    A ++   ML  G   D F Y ALI G  K  +
Sbjct: 137 MVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALISGLAKIGK 196

Query: 424 MDIAKELLFGMLD----AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
           +D A   L  M++     G  P    ++ ++   C   N E  L   DE +   L +   
Sbjct: 197 LDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDE-LDDSLDLTHF 255

Query: 480 VYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
            +  L+   CK E+ + A      M           YTSL   + + G
Sbjct: 256 TFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLG 303



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 49/191 (25%), Positives = 95/191 (49%), Gaps = 4/191 (2%)

Query: 149 GLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIH 208
            +++F +M      P+L +  +++  L +       +  ++K++Q  +  +++ +N  +H
Sbjct: 448 AVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLH 507

Query: 209 ACCKSSDV--DKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
             C+  D   D VE L   M  +    +L +Y+ L+   C+ G     L +   M   G+
Sbjct: 508 GLCQRLDTVGDGVE-LFESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGV 566

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI-KGATPNHVTYTTLIDGYCRANDLEEALRL 325
           +PD+V +N+LI   C  GR+ EA  +FR++ + + P+  +Y +L+D   R   +EEA  L
Sbjct: 567 APDVVVFNTLIRWLCIAGRVDEALEVFRELERRSAPDAWSYWSLLDALSRCERMEEARLL 626

Query: 326 REVMAAKGVYP 336
              M  +G  P
Sbjct: 627 SFHMKLQGCAP 637



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 82/197 (41%), Gaps = 33/197 (16%)

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAM------------------------------ 393
           M ++K+  D   C  L+N  CK G    AM                              
Sbjct: 1   MIDRKLV-DTRVCTALLNGLCKTGQLDRAMLLLDEMPCSPDMVAFTVVINGLCREKRLDE 59

Query: 394 --KVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVD 451
              V  R + AG   D  TY   I G CKA+ +D A +LL  M +    P+  +Y+ LVD
Sbjct: 60  AFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVD 119

Query: 452 GYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILG 511
           G       +  + +L++ V +G    +  Y  +I    K  +V+ A+R+F  M GNG   
Sbjct: 120 GLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRP 179

Query: 512 DSVIYTSLAYAYWRAGE 528
           D+ +YT+L     + G+
Sbjct: 180 DAFVYTALISGLAKIGK 196


>gi|297723047|ref|NP_001173887.1| Os04g0351333 [Oryza sativa Japonica Group]
 gi|255675359|dbj|BAH92615.1| Os04g0351333 [Oryza sativa Japonica Group]
          Length = 740

 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 117/451 (25%), Positives = 207/451 (45%), Gaps = 40/451 (8%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           +F +M    ++P +  C  ++  L K +  D    + +KMV  G+  ++  Y+++I   C
Sbjct: 70  LFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLC 129

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           KS  +DK E++L +M     R +  TYN+LI  Y   GM  E++ V  +M   G+ P + 
Sbjct: 130 KSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVD 189

Query: 272 TYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRAND--LEEALRLRE 327
             NS IH   + GR  EA+ +F    +KG  P+ ++Y+T++ GY  A D  L +   +  
Sbjct: 190 NCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFN 249

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
           +M  KG+ P    +N ++    + G +  A  +  +M  K + PD VT  T+I++ C+IG
Sbjct: 250 LMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIG 309

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD----------- 436
               A+   N M++ G+   +  Y  LI G C   E+  AKEL+  M++           
Sbjct: 310 RLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYF 369

Query: 437 -------------------------AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
                                     G  P+  +++ L++GYC   N E    LLD   S
Sbjct: 370 SSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMAS 429

Query: 472 RGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKA 531
            G+  +  +Y  L+  +CK  ++D A  +F  M   G+   SV+Y+ + +  ++A    A
Sbjct: 430 IGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTA 489

Query: 532 CSDILDDMYRRRLMITLKIYRSFSASYAKDN 562
              +  +M      +++  Y        ++N
Sbjct: 490 AKKMFHEMIESGTTVSIHTYGVVLGGLCRNN 520



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 96/388 (24%), Positives = 176/388 (45%), Gaps = 38/388 (9%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAK-DRLTDMVWKV 187
           N HV + L+  YA   M    + +F+ M+   ++P       +++SL +  RL D + K 
Sbjct: 259 NKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHK- 317

Query: 188 YKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCK 247
           +  MV +GV  +  +Y  LI  CC   ++ K ++L+ EM  KD+                
Sbjct: 318 FNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPP-------------- 363

Query: 248 KGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVT 305
                               P +  ++S+I+  C+EGR+ E + +   +   G  PN VT
Sbjct: 364 --------------------PGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVT 403

Query: 306 YTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMN 365
           + +L++GYC   ++EEA  L + MA+ G+ P    Y +++   CK GRI DA  +  +M 
Sbjct: 404 FNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDML 463

Query: 366 EKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMD 425
            K + P +V  + +++   +   T +A K+ + M+E+G  +   TY  ++ G C+    D
Sbjct: 464 HKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTD 523

Query: 426 IAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
            A  LL  +          +++ ++         +   +L D   + GL  ++  Y  +I
Sbjct: 524 EANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMI 583

Query: 486 RRFCKKEKVDYAQRLFNLMQGNGILGDS 513
               K+E  + A  LF  ++ +G   DS
Sbjct: 584 TNLIKEESYEEADNLFISVEKSGHASDS 611



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 78/297 (26%), Positives = 148/297 (49%), Gaps = 5/297 (1%)

Query: 235 LFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR 294
           + TYN LI  Y +       LA+  R+ + G+ PD  +Y SLI+GF ++G + +A  LF 
Sbjct: 14  IHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDKAHCLFL 72

Query: 295 DI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEG 352
           ++  +G  P  +   ++I   C+  ++++A  + + M   G+ P + TY+ I+  LCK  
Sbjct: 73  EMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSK 132

Query: 353 RIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYK 412
            +  A R+L +M E    P+++T N+LI+ Y   G    +++V  +M   G++       
Sbjct: 133 AMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCN 192

Query: 413 ALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNE--EALLKLLDEFV 470
           + IH   K    + AK +   M+  G  P   SYS ++ GY    +     +  + +  +
Sbjct: 193 SFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLML 252

Query: 471 SRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
           ++G+  +  V+  LI  + +   +D A  +F  MQ  G++ D+V + ++  +  R G
Sbjct: 253 TKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIG 309



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 76/291 (26%), Positives = 142/291 (48%), Gaps = 15/291 (5%)

Query: 299 ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDAN 358
           + P   TY  LID Y R +  +  L +   +   G+ P   +Y S++    K+G +  A+
Sbjct: 10  SPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDKAH 68

Query: 359 RLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGF 418
            L  EM E+ + P  + CN++I   CK+ +   A  +  +M+++G+  D FTY  +I G 
Sbjct: 69  CLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGL 128

Query: 419 CKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDV 478
           CK+K MD A+ +L  M++AG  P+  +Y+ L+ GY         +++  +  S G+   V
Sbjct: 129 CKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTV 188

Query: 479 SVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDD 538
               + I    K  + + A+ +F+ M   G   D + Y+++ + Y  A +  +C   + +
Sbjct: 189 DNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATD--SCLADVHN 246

Query: 539 MYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKH--IFKEMQ 587
           ++   LM+T  I        A +  + ++  +     G+M K   IF++MQ
Sbjct: 247 IF--NLMLTKGI--------APNKHVFNILINAYARCGMMDKAMLIFEDMQ 287


>gi|297848938|ref|XP_002892350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338192|gb|EFH68609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 493

 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 113/395 (28%), Positives = 196/395 (49%), Gaps = 2/395 (0%)

Query: 133 LSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMV 192
            S L++  A LK  +  + +F  + +  +   L++ + L++   +     +      KM+
Sbjct: 76  FSRLLVAIAKLKKYEAVISLFRHIEILGISHDLYSFSTLIDCFCRCSRLSLALSCLGKMM 135

Query: 193 QLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHY 252
           +LG   +I  +  L++  C  + + +   L+ ++       ++  YNT+I   C+     
Sbjct: 136 KLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGLGYEPNVVIYNTIIDSLCENRQVD 195

Query: 253 EALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLI 310
            AL V + ME+ GI PD++TYNSLI      G+   + R+  D+   G  P+ +T++ +I
Sbjct: 196 TALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVSARILSDMMRMGIHPDVITFSAMI 255

Query: 311 DGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIA 370
           D + +   L EA +  + M  + V P +VTYNS++  LC  G + +A ++LN M  K   
Sbjct: 256 DVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKKVLNFMVSKGFF 315

Query: 371 PDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL 430
           P+ VT NTL+N YCK      AMK+   M   G+  D FTY  L  G+C+A + + A+++
Sbjct: 316 PNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYCQAGQFNAAEKV 375

Query: 431 LFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCK 490
           L  M+  G  P   +++ L+DG C     E  L  L++       V +  Y  +I+  CK
Sbjct: 376 LARMVSCGVLPDIYTFNMLLDGLCEHGKIEKALVKLEDLQKSETVVGIITYNIIIKGMCK 435

Query: 491 KEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWR 525
             KV+ A  LF  +   G+  D + YT++     R
Sbjct: 436 ANKVEDAWYLFCSLALKGVSPDVITYTTMMIGLRR 470



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 104/369 (28%), Positives = 184/369 (49%), Gaps = 2/369 (0%)

Query: 203 YNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRME 262
           ++ L+ A  K    + V  L   +E   +  DL++++TLI  +C+      AL+   +M 
Sbjct: 76  FSRLLVAIAKLKKYEAVISLFRHIEILGISHDLYSFSTLIDCFCRCSRLSLALSCLGKMM 135

Query: 263 REGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGA--TPNHVTYTTLIDGYCRANDLE 320
           + G  P IVT+ SL++GFC   R++EA  L   I G    PN V Y T+ID  C    ++
Sbjct: 136 KLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGLGYEPNVVIYNTIIDSLCENRQVD 195

Query: 321 EALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLI 380
            AL +   M   G+ P V+TYNS++ +L   G+   + R+L++M    I PD +T + +I
Sbjct: 196 TALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVSARILSDMMRMGIHPDVITFSAMI 255

Query: 381 NAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFS 440
           + + K G    A K  + M++  +  +  TY +LI+G C    +D AK++L  M+  GF 
Sbjct: 256 DVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKKVLNFMVSKGFF 315

Query: 441 PSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRL 500
           P+  +Y+ LV+GYC     +  +K+L      G+  D   Y  L + +C+  + + A+++
Sbjct: 316 PNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYCQAGQFNAAEKV 375

Query: 501 FNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAK 560
              M   G+L D   +  L       G+ +     L+D+ +   ++ +  Y        K
Sbjct: 376 LARMVSCGVLPDIYTFNMLLDGLCEHGKIEKALVKLEDLQKSETVVGIITYNIIIKGMCK 435

Query: 561 DNEILDLFW 569
            N++ D ++
Sbjct: 436 ANKVEDAWY 444



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 95/341 (27%), Positives = 175/341 (51%), Gaps = 4/341 (1%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           S L  ++K+  +P  +      LV  + ++   Q+ + + DQ+      P++     +++
Sbjct: 129 SCLGKMMKLGFEP--SIVTFGSLVNGFCHVNRIQEAMSLVDQIVGLGYEPNVVIYNTIID 186

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
           SL ++R  D    V   M ++G+  ++  YN LI     S       ++L +M    +  
Sbjct: 187 SLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVSARILSDMMRMGIHP 246

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRL- 292
           D+ T++ +I ++ K+G   EA    D M +  + P+IVTYNSLI+G C  G + EA+++ 
Sbjct: 247 DVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKKVL 306

Query: 293 -FRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
            F   KG  PN VTY TL++GYC++  +++A+++  VM+  GV     TYN++ +  C+ 
Sbjct: 307 NFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYCQA 366

Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
           G+   A ++L  M    + PD  T N L++  C+ G    A+     + ++  ++   TY
Sbjct: 367 GQFNAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEKALVKLEDLQKSETVVGIITY 426

Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
             +I G CKA +++ A  L   +   G SP   +Y+ ++ G
Sbjct: 427 NIIIKGMCKANKVEDAWYLFCSLALKGVSPDVITYTTMMIG 467



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 89/320 (27%), Positives = 162/320 (50%), Gaps = 2/320 (0%)

Query: 222 LLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFC 281
           L C+M        +  ++ L+    K   +   +++   +E  GIS D+ ++++LI  FC
Sbjct: 60  LFCDMAESRPLPSIVDFSRLLVAIAKLKKYEAVISLFRHIEILGISHDLYSFSTLIDCFC 119

Query: 282 REGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVV 339
           R  R+  A      +   G  P+ VT+ +L++G+C  N ++EA+ L + +   G  P VV
Sbjct: 120 RCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGLGYEPNVV 179

Query: 340 TYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRM 399
            YN+I+  LC+  ++  A  +LN M +  I PD +T N+LI      G    + ++ + M
Sbjct: 180 IYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVSARILSDM 239

Query: 400 LEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNE 459
           +  G+  D  T+ A+I  F K  ++  AK+    M+     P+  +Y+ L++G C     
Sbjct: 240 MRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGLL 299

Query: 460 EALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
           +   K+L+  VS+G   +   Y  L+  +CK ++VD A ++  +M  +G+ GD+  Y +L
Sbjct: 300 DEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNTL 359

Query: 520 AYAYWRAGEPKACSDILDDM 539
              Y +AG+  A   +L  M
Sbjct: 360 YQGYCQAGQFNAAEKVLARM 379



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 60/234 (25%), Positives = 109/234 (46%)

Query: 333 GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
           G + G   Y   LR      +  DA  L  +M E +  P  V  + L+ A  K+    + 
Sbjct: 33  GAFSGGSDYRERLRSGLHSIKFNDALTLFCDMAESRPLPSIVDFSRLLVAIAKLKKYEAV 92

Query: 393 MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
           + +   +   G+  D +++  LI  FC+   + +A   L  M+  GF PS  ++  LV+G
Sbjct: 93  ISLFRHIEILGISHDLYSFSTLIDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNG 152

Query: 453 YCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGD 512
           +C+ N  +  + L+D+ V  G   +V +Y  +I   C+  +VD A  + N M+  GI  D
Sbjct: 153 FCHVNRIQEAMSLVDQIVGLGYEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPD 212

Query: 513 SVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
            + Y SL    + +G+    + IL DM R  +   +  + +    + K+ ++L+
Sbjct: 213 VITYNSLITRLFHSGKWGVSARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLE 266



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 52/236 (22%), Positives = 104/236 (44%)

Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT 378
             +AL L   MA     P +V ++ +L  + K  +      L   +    I+ D  + +T
Sbjct: 54  FNDALTLFCDMAESRPLPSIVDFSRLLVAIAKLKKYEAVISLFRHIEILGISHDLYSFST 113

Query: 379 LINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAG 438
           LI+ +C+    + A+    +M++ G      T+ +L++GFC    +  A  L+  ++  G
Sbjct: 114 LIDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGLG 173

Query: 439 FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQ 498
           + P+   Y+ ++D  C     +  L +L+     G+  DV  Y +LI R     K   + 
Sbjct: 174 YEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVSA 233

Query: 499 RLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSF 554
           R+ + M   GI  D + ++++   + + G+        D+M +R +   +  Y S 
Sbjct: 234 RILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSL 289



 Score = 72.0 bits (175), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 59/296 (19%), Positives = 124/296 (41%), Gaps = 11/296 (3%)

Query: 271 VTYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMA 330
           + +N  +  FC    M E+R L        P+ V ++ L+    +    E  + L   + 
Sbjct: 52  IKFNDALTLFCD---MAESRPL--------PSIVDFSRLLVAIAKLKKYEAVISLFRHIE 100

Query: 331 AKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTA 390
             G+   + ++++++   C+  R+  A   L +M +    P  VT  +L+N +C +    
Sbjct: 101 ILGISHDLYSFSTLIDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQ 160

Query: 391 SAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLV 450
            AM + ++++  G   +   Y  +I   C+ +++D A ++L  M   G  P   +Y+ L+
Sbjct: 161 EAMSLVDQIVGLGYEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLI 220

Query: 451 DGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGIL 510
               +        ++L + +  G+  DV  + A+I  F K+ ++  A++ ++ M    + 
Sbjct: 221 TRLFHSGKWGVSARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVD 280

Query: 511 GDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
            + V Y SL       G       +L+ M  +        Y +    Y K   + D
Sbjct: 281 PNIVTYNSLINGLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDD 336



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 58/234 (24%), Positives = 111/234 (47%), Gaps = 22/234 (9%)

Query: 84  MIHILTKNKHFKSAQNMLEKIALR----DFLSTPSVLNALVKIHDDPDGNSHVLSWLVI- 138
           MI +  K      A+   +++  R    + ++  S++N L  IH   D    VL+++V  
Sbjct: 254 MIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLC-IHGLLDEAKKVLNFMVSK 312

Query: 139 -FYANLKMTQDGL--------QVFDQMRVHNLMPH--LHACTVLLNSLAKDRLT----DM 183
            F+ N  +T + L        +V D M++  +M H  +   T   N+L +        + 
Sbjct: 313 GFFPN-AVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYCQAGQFNA 371

Query: 184 VWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIA 243
             KV  +MV  GV+ +I+ +N+L+   C+   ++K    L +++  +    + TYN +I 
Sbjct: 372 AEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEKALVKLEDLQKSETVVGIITYNIIIK 431

Query: 244 LYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK 297
             CK     +A  +   +  +G+SPD++TY +++ G  R+    EA  L+R +K
Sbjct: 432 GMCKANKVEDAWYLFCSLALKGVSPDVITYTTMMIGLRRKRLWLEAHELYRKMK 485


>gi|222623943|gb|EEE58075.1| hypothetical protein OsJ_08937 [Oryza sativa Japonica Group]
          Length = 933

 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 115/414 (27%), Positives = 203/414 (49%), Gaps = 37/414 (8%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           L +  +M    ++  L   T L++ L K   TD V    +  +   +  N   Y VLI A
Sbjct: 329 LSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDA 388

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
            CK+ +VD+ E++L EME K +  ++ T++++I  + K+G+  +A   +  M+  GI+P+
Sbjct: 389 LCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPN 448

Query: 270 IVTYNSLIHGFCR-----------------------------------EGRMREARRLFR 294
           +VTY +LI GF +                                    G++ EA  LF+
Sbjct: 449 VVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFK 508

Query: 295 DIKGA--TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEG 352
           D  G+  + +HV YTTLIDG  +A D+  A +  + +  + + P  V YN  +  LC  G
Sbjct: 509 DASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLG 568

Query: 353 RIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYK 412
           + ++A   L EM    + PD  T NT+I ++C+ G+TA A+K+ + M  + +  +  TY 
Sbjct: 569 KFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYN 628

Query: 413 ALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSR 472
            L+ G      ++ AK LL  M+ AGFSPS  ++  ++         + +L + +  ++ 
Sbjct: 629 TLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNA 688

Query: 473 GLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRA 526
           GL  D++VY  L++  C       A  +   M G+GI  D++ + +L   + ++
Sbjct: 689 GLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKS 742



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 115/390 (29%), Positives = 194/390 (49%), Gaps = 2/390 (0%)

Query: 167 ACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEM 226
           A T+ L  +A    T     V  +M   G+  ++  YN L+   C++  VD    +L  M
Sbjct: 171 AGTLSLLDIAGFGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMM 230

Query: 227 EFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRM 286
           +   V  ++ TY   I  YC+     EA  + + M R G+  D+VT ++L+ G CR+GR 
Sbjct: 231 KEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRF 290

Query: 287 REARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSI 344
            EA  LFR++   GA PNHVTY TLID   +A   +E L L   M ++GV   +VTY ++
Sbjct: 291 SEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTAL 350

Query: 345 LRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGL 404
           +  L K+G+  +    L       ++P+ VT   LI+A CK  +   A +V   M E  +
Sbjct: 351 MDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSI 410

Query: 405 MLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLK 464
             +  T+ ++I+GF K   +D A E    M + G +P+  +Y  L+DG+     ++A L+
Sbjct: 411 SPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALE 470

Query: 465 LLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYW 524
           +  + +  G+ V+  +  +L+    +  K++ A  LF    G+G+  D V YT+L    +
Sbjct: 471 VYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLF 530

Query: 525 RAGEPKACSDILDDMYRRRLMITLKIYRSF 554
           +AG+         ++  R ++    +Y  F
Sbjct: 531 KAGDMPTAFKFGQELMDRNMLPDAVVYNVF 560



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 104/376 (27%), Positives = 178/376 (47%), Gaps = 2/376 (0%)

Query: 169 TVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEF 228
           T L++ L K       +K  ++++   ++ +  +YNV I+  C      + +  L EM  
Sbjct: 523 TTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRN 582

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
             ++ D  TYNT+I  +C+KG   +AL +   M+   I P+++TYN+L+ G    G + +
Sbjct: 583 MGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEK 642

Query: 289 ARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILR 346
           A+ L  ++   G +P+ +T+  ++    ++  L+  L + E M   G++  +  YN++L+
Sbjct: 643 AKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQ 702

Query: 347 KLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLML 406
            LC  G  R A  +L EM    IAPD +T N LI  +CK     +A     +ML   +  
Sbjct: 703 VLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISP 762

Query: 407 DQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLL 466
           +  T+  L+ G      +  A  +L  M  +G  P+  +Y  L  G+  ++N+   ++L 
Sbjct: 763 NIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLY 822

Query: 467 DEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRA 526
            E V +G    VS Y ALI  F K   +  A+ LF  MQ  G+   S  Y  L   + R 
Sbjct: 823 CEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRI 882

Query: 527 GEPKACSDILDDMYRR 542
                    L DM  +
Sbjct: 883 RNGTEVKKCLKDMKEK 898



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 111/437 (25%), Positives = 200/437 (45%), Gaps = 14/437 (3%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           V D M+   + P++   T  +    + +  +  + +Y+ MV+ GV+ ++   + L+   C
Sbjct: 226 VLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLC 285

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           +     +   L  EM+      +  TY TLI    K G   E L++   M   G+  D+V
Sbjct: 286 RDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLV 345

Query: 272 TYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           TY +L+    ++G+  E +   R       +PN VTYT LID  C+A++++EA ++   M
Sbjct: 346 TYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEM 405

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
             K + P VVT++S++    K G +  A      M E+ I P+ VT  TLI+ + K    
Sbjct: 406 EEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQ 465

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
            +A++V + ML  G+ +++F   +L++G  +  +++ A  L      +G S  + +Y+ L
Sbjct: 466 DAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTL 525

Query: 450 VDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGI 509
           +DG     +     K   E + R +  D  VY   I   C   K   A+     M+  G+
Sbjct: 526 IDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGL 585

Query: 510 LGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFW 569
             D   Y ++  ++ R GE      +L +M    +   L  Y +  A          LF 
Sbjct: 586 KPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAG---------LFG 636

Query: 570 SHVVDRGLMSKHIFKEM 586
           +  V++   +K++  EM
Sbjct: 637 TGAVEK---AKYLLNEM 650



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 102/379 (26%), Positives = 161/379 (42%), Gaps = 37/379 (9%)

Query: 160 NLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKV 219
           N++P      V +N L              +M  +G+  +   YN +I + C+  +  K 
Sbjct: 549 NMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKA 608

Query: 220 EKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISP----------- 268
            KLL EM+   ++ +L TYNTL+A     G   +A  + + M   G SP           
Sbjct: 609 LKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQA 668

Query: 269 ------------------------DIVTYNSLIHGFCREGRMREARRLFRDI--KGATPN 302
                                   DI  YN+L+   C  G  R+A  +  ++   G  P+
Sbjct: 669 CSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPD 728

Query: 303 HVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLN 362
            +T+  LI G+C+++ L+ A      M  + + P + T+N++L  L   GRI +A  +L 
Sbjct: 729 TITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLI 788

Query: 363 EMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAK 422
           EM +  + P+N+T + L   + K  +   AM++   M+  G +    TY ALI  F KA 
Sbjct: 789 EMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAG 848

Query: 423 EMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYR 482
            M  AKEL   M   G  P+ C+Y  LV G+    N   + K L +   +G         
Sbjct: 849 MMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLS 908

Query: 483 ALIRRFCKKEKVDYAQRLF 501
            + R F K      AQRL 
Sbjct: 909 FICRAFSKPGMTWQAQRLL 927



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 112/405 (27%), Positives = 185/405 (45%), Gaps = 21/405 (5%)

Query: 152 VFDQMRVHNLMP-HLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           +F +M      P H+  CT L++SLAK      +  +  +MV  GVV ++  Y  L+   
Sbjct: 296 LFREMDKVGAAPNHVTYCT-LIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWL 354

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
            K    D+V+  L      ++  +  TY  LI   CK     EA  V   ME + ISP++
Sbjct: 355 GKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNV 414

Query: 271 VTYNSLIHGFCREG---RMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLRE 327
           VT++S+I+GF + G   +  E +R+ ++ +G  PN VTY TLIDG+ +    + AL +  
Sbjct: 415 VTFSSVINGFVKRGLLDKATEYKRMMKE-RGINPNVVTYGTLIDGFFKFQGQDAALEVYH 473

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
            M  +GV       +S++  L + G+I +A  L  + +   ++ D+V   TLI+   K G
Sbjct: 474 DMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAG 533

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
           D  +A K    +++  ++ D   Y   I+  C   +   AK  L  M + G  P   +Y+
Sbjct: 534 DMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYN 593

Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGN 507
            ++  +C K      LKLL E     +  ++  Y  L+        V+ A+ L N M   
Sbjct: 594 TMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSA 653

Query: 508 GILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYR 552
           G    S+ +  +          +ACS        RRL + L I+ 
Sbjct: 654 GFSPSSLTHRRVL---------QACSQ------SRRLDVILDIHE 683



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 94/337 (27%), Positives = 148/337 (43%), Gaps = 10/337 (2%)

Query: 228 FKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMR 287
            +  R     YN L+A       H  A AV   M + G+  D VT N+L+ G CR G++ 
Sbjct: 96  LRSSRPTTVAYNILLAALSD---HAHAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVD 152

Query: 288 EARRLFRDIKGATPNHVTYTTL----IDGYCRANDLEEALRLREVMAAKGVYPGVVTYNS 343
            A  L     G TP   +  TL    I G+    D   AL + + M A+G+   VV YN+
Sbjct: 153 AAAALADRAGGITPWMSSAGTLSLLDIAGF---GDTPAALSVADRMTAQGLPMDVVGYNT 209

Query: 344 ILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAG 403
           ++   C+ G++  A  +L+ M E  + P+  T    I  YC+      A  +   M+  G
Sbjct: 210 LVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNG 269

Query: 404 LMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALL 463
           ++LD  T  AL+ G C+      A  L   M   G +P++ +Y  L+D        + LL
Sbjct: 270 VLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELL 329

Query: 464 KLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAY 523
            LL E VSRG+ +D+  Y AL+    K+ K D  +        + +  + V YT L  A 
Sbjct: 330 SLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDAL 389

Query: 524 WRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAK 560
            +A        +L +M  + +   +  + S    + K
Sbjct: 390 CKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVK 426



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 87/346 (25%), Positives = 158/346 (45%), Gaps = 4/346 (1%)

Query: 106 LRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHL 165
           L  F    S L  +  +   PD +++  + +++ +     T   L++  +M++ ++ P+L
Sbjct: 567 LGKFKEAKSFLTEMRNMGLKPDQSTY--NTMIVSHCRKGETAKALKLLHEMKMSSIKPNL 624

Query: 166 HACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCE 225
                L+  L      +    +  +MV  G   +   +  ++ AC +S  +D +  +   
Sbjct: 625 ITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEW 684

Query: 226 MEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGR 285
           M    + AD+  YNTL+ + C  GM  +A  V + M   GI+PD +T+N+LI G C+   
Sbjct: 685 MMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSH 744

Query: 286 MREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNS 343
           +  A   +  +  +  +PN  T+ TL+ G      + EA  +   M   G+ P  +TY+ 
Sbjct: 745 LDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDI 804

Query: 344 ILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAG 403
           +     K+    +A RL  EM  K   P   T N LI+ + K G    A ++   M + G
Sbjct: 805 LATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRG 864

Query: 404 LMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
           +     TY  L+ G+ + +     K+ L  M + GFSPS  + S++
Sbjct: 865 VHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFI 910



 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 57/257 (22%), Positives = 103/257 (40%), Gaps = 25/257 (9%)

Query: 324 RLREVMAAKGVYPGVVTY--------NSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVT 375
           RL   +A  G+    + +        N++L   C+   +R A  LL     +   P  V 
Sbjct: 51  RLIPALATSGLAAAAIRFRPADPASLNALLYSHCRLRLLRPAIALL-----RSSRPTTVA 105

Query: 376 CNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGML 435
            N L+ A   + D A A  V   M + G+  D  T   L+ G C+  +  +         
Sbjct: 106 YNILLAA---LSDHAHAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQ--VDAAAALADR 160

Query: 436 DAGFSPSYCSYSWL----VDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
             G +P   S   L    + G+    +  A L + D   ++GL +DV  Y  L+  FC+ 
Sbjct: 161 AGGITPWMSSAGTLSLLDIAGF---GDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRA 217

Query: 492 EKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIY 551
            +VD A+ + ++M+  G+  +   YT     Y R    +   D+ + M R  +++ +   
Sbjct: 218 GQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTL 277

Query: 552 RSFSASYAKDNEILDLF 568
            +  A   +D    + +
Sbjct: 278 SALVAGLCRDGRFSEAY 294


>gi|222628664|gb|EEE60796.1| hypothetical protein OsJ_14385 [Oryza sativa Japonica Group]
          Length = 808

 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 117/451 (25%), Positives = 207/451 (45%), Gaps = 40/451 (8%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           +F +M    ++P +  C  ++  L K +  D    + +KMV  G+  ++  Y+++I   C
Sbjct: 156 LFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLC 215

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           KS  +DK E++L +M     R +  TYN+LI  Y   GM  E++ V  +M   G+ P + 
Sbjct: 216 KSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVD 275

Query: 272 TYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRAND--LEEALRLRE 327
             NS IH   + GR  EA+ +F    +KG  P+ ++Y+T++ GY  A D  L +   +  
Sbjct: 276 NCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFN 335

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
           +M  KG+ P    +N ++    + G +  A  +  +M  K + PD VT  T+I++ C+IG
Sbjct: 336 LMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIG 395

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD----------- 436
               A+   N M++ G+   +  Y  LI G C   E+  AKEL+  M++           
Sbjct: 396 RLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYF 455

Query: 437 -------------------------AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
                                     G  P+  +++ L++GYC   N E    LLD   S
Sbjct: 456 SSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMAS 515

Query: 472 RGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKA 531
            G+  +  +Y  L+  +CK  ++D A  +F  M   G+   SV+Y+ + +  ++A    A
Sbjct: 516 IGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTA 575

Query: 532 CSDILDDMYRRRLMITLKIYRSFSASYAKDN 562
              +  +M      +++  Y        ++N
Sbjct: 576 AKKMFHEMIESGTTVSIHTYGVVLGGLCRNN 606



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 103/445 (23%), Positives = 195/445 (43%), Gaps = 38/445 (8%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAK-DRLTDMVWKV 187
           N HV + L+  YA   M    + +F+ M+   ++P       +++SL +  RL D + K 
Sbjct: 345 NKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHK- 403

Query: 188 YKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCK 247
           +  MV +GV  +  +Y  LI  CC   ++ K ++L+ EM  KD+                
Sbjct: 404 FNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPP-------------- 449

Query: 248 KGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVT 305
                               P +  ++S+I+  C+EGR+ E + +   +   G  PN VT
Sbjct: 450 --------------------PGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVT 489

Query: 306 YTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMN 365
           + +L++GYC   ++EEA  L + MA+ G+ P    Y +++   CK GRI DA  +  +M 
Sbjct: 490 FNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDML 549

Query: 366 EKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMD 425
            K + P +V  + +++   +   T +A K+ + M+E+G  +   TY  ++ G C+    D
Sbjct: 550 HKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTD 609

Query: 426 IAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
            A  LL  +          +++ ++         +   +L D   + GL  ++  Y  +I
Sbjct: 610 EANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMI 669

Query: 486 RRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
               K+E  + A  LF  ++ +G   DS +   +        E    S+ L  +    L 
Sbjct: 670 TNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLT 729

Query: 546 ITLKIYRSFSASYAKDNEILDLFWS 570
           +        ++ ++++  I  LF +
Sbjct: 730 LEASTISLLASLFSREGMIKGLFGT 754



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 78/297 (26%), Positives = 148/297 (49%), Gaps = 5/297 (1%)

Query: 235 LFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR 294
           + TYN LI  Y +       LA+  R+ + G+ PD  +Y SLI+GF ++G + +A  LF 
Sbjct: 100 IHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDKAHCLFL 158

Query: 295 DI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEG 352
           ++  +G  P  +   ++I   C+  ++++A  + + M   G+ P + TY+ I+  LCK  
Sbjct: 159 EMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSK 218

Query: 353 RIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYK 412
            +  A R+L +M E    P+++T N+LI+ Y   G    +++V  +M   G++       
Sbjct: 219 AMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCN 278

Query: 413 ALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNE--EALLKLLDEFV 470
           + IH   K    + AK +   M+  G  P   SYS ++ GY    +     +  + +  +
Sbjct: 279 SFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLML 338

Query: 471 SRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
           ++G+  +  V+  LI  + +   +D A  +F  MQ  G++ D+V + ++  +  R G
Sbjct: 339 TKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIG 395



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 76/291 (26%), Positives = 142/291 (48%), Gaps = 15/291 (5%)

Query: 299 ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDAN 358
           + P   TY  LID Y R +  +  L +   +   G+ P   +Y S++    K+G +  A+
Sbjct: 96  SPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDKAH 154

Query: 359 RLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGF 418
            L  EM E+ + P  + CN++I   CK+ +   A  +  +M+++G+  D FTY  +I G 
Sbjct: 155 CLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGL 214

Query: 419 CKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDV 478
           CK+K MD A+ +L  M++AG  P+  +Y+ L+ GY         +++  +  S G+   V
Sbjct: 215 CKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTV 274

Query: 479 SVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDD 538
               + I    K  + + A+ +F+ M   G   D + Y+++ + Y  A +  +C   + +
Sbjct: 275 DNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATD--SCLADVHN 332

Query: 539 MYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKH--IFKEMQ 587
           ++   LM+T  I        A +  + ++  +     G+M K   IF++MQ
Sbjct: 333 IF--NLMLTKGI--------APNKHVFNILINAYARCGMMDKAMLIFEDMQ 373


>gi|222632709|gb|EEE64841.1| hypothetical protein OsJ_19698 [Oryza sativa Japonica Group]
          Length = 496

 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 108/341 (31%), Positives = 169/341 (49%), Gaps = 2/341 (0%)

Query: 167 ACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEM 226
           ACT L+N   K        +V+ +M  LG+  N   Y  L+H        +K   L  EM
Sbjct: 40  ACTALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALFEEM 99

Query: 227 EFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRM 286
               V  +L+TYN LI  +C+ G    A ++ D M   GI  ++V+YN+LI G CR G++
Sbjct: 100 RRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKL 159

Query: 287 REARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSI 344
            +A +L   ++  G  P+ +T+  L+DGY +A  +  AL     M A G  P  VTYN +
Sbjct: 160 WDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNML 219

Query: 345 LRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGL 404
           +   C+   +  ANR L++M E+ + P  VT   LI+++ +      A ++   M +AGL
Sbjct: 220 IAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGL 279

Query: 405 MLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLK 464
            +D  TY  L+   C    M  A++L   M + G  PS   Y  ++ GY  + +    LK
Sbjct: 280 EVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALK 339

Query: 465 LLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           L+ E   +GL  + + Y   IR  CK +K   A+ L + M+
Sbjct: 340 LIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEAEALLDDME 380



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 105/338 (31%), Positives = 170/338 (50%), Gaps = 3/338 (0%)

Query: 211 CKSSDVDKVEKLLCE-MEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
           C + DV     +L    +  D   D+     L+   CK G   EA  V D M   G++P+
Sbjct: 13  CAAGDVRSALAMLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRVFDEMPLLGLAPN 72

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLRE 327
            VTY +L+HG+   G+  +   LF +++  G  PN  TY  LI  +CR  + E A  L +
Sbjct: 73  EVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFD 132

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
            M  +G+   VV+YN+++  LC+ G++ DA +LL+ M  +   P  +T N L++ Y K G
Sbjct: 133 EMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAG 192

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
             ++A+   N+M  AG      TY  LI GFC+A++M  A   L  M + G  P+  +Y+
Sbjct: 193 KMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYT 252

Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGN 507
            L+D +  +N+     ++L      GL VD   Y  L+R  C +  +  A++LF  M   
Sbjct: 253 ILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEK 312

Query: 508 GILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
           G+   +VIY  + Y Y R G       ++ +M ++ L+
Sbjct: 313 GVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLI 350



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 99/338 (29%), Positives = 158/338 (46%), Gaps = 2/338 (0%)

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER 263
             L++ CCK  DV +  ++  EM    +  +  TY  L+  Y   G   +  A+ + M R
Sbjct: 42  TALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALFEEMRR 101

Query: 264 EGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEE 321
            G+ P++ TYN LI  +CR G    AR LF +  ++G   N V+Y TLI G CR   L +
Sbjct: 102 GGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWD 161

Query: 322 ALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
           A +L ++M  +G  P ++T+N ++    K G++ +A    N+M      P  VT N LI 
Sbjct: 162 AAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIA 221

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
            +C+  D   A +  + M E GL   + TY  LI  F +   M  A E+L GM  AG   
Sbjct: 222 GFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEV 281

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
              +Y  LV   C + N +   KL      +G+     +Y  +I  + ++     A +L 
Sbjct: 282 DAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLI 341

Query: 502 NLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
             M+  G++ +S  Y        +  + +    +LDDM
Sbjct: 342 MEMRQKGLIPNSASYGLTIRVLCKDDKCQEAEALLDDM 379



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 92/287 (32%), Positives = 140/287 (48%), Gaps = 2/287 (0%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           + G  +F++MR   + P+L+    L+    +    +    ++ +M   G+V N+  YN L
Sbjct: 90  EKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTL 149

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           I   C+   +    KLL  M  +  R  + T+N L+  Y K G    AL   ++M+  G 
Sbjct: 150 IAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGF 209

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALR 324
            P  VTYN LI GFCR   M  A R   D+K  G  P  VTYT LID + R N + +A  
Sbjct: 210 QPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFE 269

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           +   M   G+     TY  ++R LC EG ++DA +L   M EK + P NV  + +I  Y 
Sbjct: 270 ILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYG 329

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
           + G +  A+K+   M + GL+ +  +Y   I   CK  +   A+ LL
Sbjct: 330 REGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEAEALL 376



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 93/321 (28%), Positives = 156/321 (48%), Gaps = 2/321 (0%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           +VFD+M +  L P+    T L++        +  + ++++M + GV  N++ YN LI   
Sbjct: 59  RVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEW 118

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           C++ + ++   L  EM  + +  ++ +YNTLIA  C+ G  ++A  + D M  EG  P I
Sbjct: 119 CRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSI 178

Query: 271 VTYNSLIHGFCREGRMREARRLFRDIKGA--TPNHVTYTTLIDGYCRANDLEEALRLREV 328
           +T+N L+ G+ + G+M  A   F  +K A   P+ VTY  LI G+CRA D+  A R    
Sbjct: 179 ITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSD 238

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M  +G+ P  VTY  ++    +E  +  A  +L  M +  +  D  T   L+ A C  G+
Sbjct: 239 MKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGN 298

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
              A K+   M E G+      Y  +I+G+ +      A +L+  M   G  P+  SY  
Sbjct: 299 MKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSASYGL 358

Query: 449 LVDGYCNKNNEEALLKLLDEF 469
            +   C  +  +    LLD+ 
Sbjct: 359 TIRVLCKDDKCQEAEALLDDM 379



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 70/260 (26%), Positives = 109/260 (41%), Gaps = 9/260 (3%)

Query: 314 CRANDLEEALRLREVMAAKGVYPG-----VVTYNSILRKLCKEGRIRDANRLLNEMNEKK 368
           C A D+  AL     M A+G   G     V    +++   CK G + +A R+ +EM    
Sbjct: 13  CAAGDVRSAL----AMLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRVFDEMPLLG 68

Query: 369 IAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAK 428
           +AP+ VT   L++ Y   G       +   M   G+  + +TY  LI  +C+  E + A+
Sbjct: 69  LAPNEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERAR 128

Query: 429 ELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRF 488
            L   M   G   +  SY+ L+ G C         KLLD   + G    +  +  L+  +
Sbjct: 129 SLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGY 188

Query: 489 CKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITL 548
            K  K+  A   FN M+  G    +V Y  L   + RA +    +  L DM  R L  T 
Sbjct: 189 GKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTK 248

Query: 549 KIYRSFSASYAKDNEILDLF 568
             Y     S+A++N +   F
Sbjct: 249 VTYTILIDSFARENHMGKAF 268



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 66/289 (22%), Positives = 116/289 (40%), Gaps = 24/289 (8%)

Query: 48  LNLYNC-----CHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLE 102
           L  YNC     C       A   + E  V     ++ S+ T+I  L ++     A  +L+
Sbjct: 108 LYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLD 167

Query: 103 KIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLM 162
              +R   + PS++                 + LV  Y       + L  F+QM+     
Sbjct: 168 --MMRTEGTRPSII---------------TFNLLVDGYGKAGKMSNALPFFNQMKAAGFQ 210

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
           P      +L+    + R      +    M + G+      Y +LI +  + + + K  ++
Sbjct: 211 PSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEI 270

Query: 223 LCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR 282
           L  ME   +  D  TY  L+   C +G   +A  +   M  +G+ P  V Y+ +I+G+ R
Sbjct: 271 LAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGR 330

Query: 283 EGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           EG   +A +L  ++  KG  PN  +Y   I   C+ +  +EA  L + M
Sbjct: 331 EGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEAEALLDDM 379



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/147 (25%), Positives = 70/147 (47%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           +    M+   L P     T+L++S A++      +++   M + G+  + H Y VL+ A 
Sbjct: 234 RALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRAL 293

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           C   ++    KL   M  K V      Y+ +I  Y ++G  Y+AL +   M ++G+ P+ 
Sbjct: 294 CMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLIPNS 353

Query: 271 VTYNSLIHGFCREGRMREARRLFRDIK 297
            +Y   I   C++ + +EA  L  D++
Sbjct: 354 ASYGLTIRVLCKDDKCQEAEALLDDME 380


>gi|115449873|ref|NP_001048572.1| Os02g0824000 [Oryza sativa Japonica Group]
 gi|113538103|dbj|BAF10486.1| Os02g0824000 [Oryza sativa Japonica Group]
          Length = 1013

 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 115/414 (27%), Positives = 203/414 (49%), Gaps = 37/414 (8%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           L +  +M    ++  L   T L++ L K   TD V    +  +   +  N   Y VLI A
Sbjct: 329 LSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDA 388

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
            CK+ +VD+ E++L EME K +  ++ T++++I  + K+G+  +A   +  M+  GI+P+
Sbjct: 389 LCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPN 448

Query: 270 IVTYNSLIHGFCR-----------------------------------EGRMREARRLFR 294
           +VTY +LI GF +                                    G++ EA  LF+
Sbjct: 449 VVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFK 508

Query: 295 DIKGA--TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEG 352
           D  G+  + +HV YTTLIDG  +A D+  A +  + +  + + P  V YN  +  LC  G
Sbjct: 509 DASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLG 568

Query: 353 RIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYK 412
           + ++A   L EM    + PD  T NT+I ++C+ G+TA A+K+ + M  + +  +  TY 
Sbjct: 569 KFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYN 628

Query: 413 ALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSR 472
            L+ G      ++ AK LL  M+ AGFSPS  ++  ++         + +L + +  ++ 
Sbjct: 629 TLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNA 688

Query: 473 GLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRA 526
           GL  D++VY  L++  C       A  +   M G+GI  D++ + +L   + ++
Sbjct: 689 GLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKS 742



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 111/376 (29%), Positives = 188/376 (50%), Gaps = 2/376 (0%)

Query: 181 TDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNT 240
           T     V  +M   G+  ++  YN L+   C++  VD    +L  M+   V  ++ TY  
Sbjct: 185 TPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTP 244

Query: 241 LIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--G 298
            I  YC+     EA  + + M R G+  D+VT ++L+ G CR+GR  EA  LFR++   G
Sbjct: 245 FIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVG 304

Query: 299 ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDAN 358
           A PNHVTY TLID   +A   +E L L   M ++GV   +VTY +++  L K+G+  +  
Sbjct: 305 AAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVK 364

Query: 359 RLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGF 418
             L       ++P+ VT   LI+A CK  +   A +V   M E  +  +  T+ ++I+GF
Sbjct: 365 DTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGF 424

Query: 419 CKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDV 478
            K   +D A E    M + G +P+  +Y  L+DG+     ++A L++  + +  G+ V+ 
Sbjct: 425 VKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNK 484

Query: 479 SVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDD 538
            +  +L+    +  K++ A  LF    G+G+  D V YT+L    ++AG+         +
Sbjct: 485 FIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQE 544

Query: 539 MYRRRLMITLKIYRSF 554
           +  R ++    +Y  F
Sbjct: 545 LMDRNMLPDAVVYNVF 560



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 104/375 (27%), Positives = 182/375 (48%), Gaps = 3/375 (0%)

Query: 169 TVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEF 228
           T L++ L K       +K  ++++   ++ +  +YNV I+  C      + +  L EM  
Sbjct: 523 TTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRN 582

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
             ++ D  TYNT+I  +C+KG   +AL +   M+   I P+++TYN+L+ G    G + +
Sbjct: 583 MGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEK 642

Query: 289 ARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILR 346
           A+ L  ++   G +P+ +T+  ++    ++  L+  L + E M   G++  +  YN++L+
Sbjct: 643 AKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQ 702

Query: 347 KLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLML 406
            LC  G  R A  +L EM    IAPD +T N LI  +CK     +A     +ML   +  
Sbjct: 703 VLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISP 762

Query: 407 DQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLL 466
           +  T+  L+ G      +  A  +L  M  +G  P+  +Y  L  G+  ++N+   ++L 
Sbjct: 763 NIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLY 822

Query: 467 DEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWR- 525
            E V +G    VS Y ALI  F K   +  A+ LF  MQ  G+   S  Y  L   ++  
Sbjct: 823 CEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWYDL 882

Query: 526 AGEPKACSDILDDMY 540
           A E K+ +    ++Y
Sbjct: 883 AREQKSQNTYFTEIY 897



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 138/582 (23%), Positives = 253/582 (43%), Gaps = 41/582 (7%)

Query: 28  KLLNPNIA---SSLTSTAIHKVLLN-LYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWT 83
           +LL P IA   SS  +T  + +LL  L +  H P++     +  +  VP    ++    T
Sbjct: 87  RLLRPAIALLRSSRPTTVAYNILLAALSDHAHAPAV---LAEMCKRGVPFDGVTVN---T 140

Query: 84  MIHILTKNKHFKSAQNMLEK---IALRDFLSTPSVLNALVKIHDDPDG-------NSHVL 133
           ++  L +N    +A  + ++   I   D +   +++    ++ D P          +  L
Sbjct: 141 LLAGLCRNGQVDAAAALADRGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGL 200

Query: 134 SWLVIFYANL-------KMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWK 186
              V+ Y  L               V D M+   + P++   T  +    + +  +  + 
Sbjct: 201 PMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFD 260

Query: 187 VYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYC 246
           +Y+ MV+ GV+ ++   + L+   C+     +   L  EM+      +  TY TLI    
Sbjct: 261 LYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLA 320

Query: 247 KKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHV 304
           K G   E L++   M   G+  D+VTY +L+    ++G+  E +   R       +PN V
Sbjct: 321 KAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGV 380

Query: 305 TYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM 364
           TYT LID  C+A++++EA ++   M  K + P VVT++S++    K G +  A      M
Sbjct: 381 TYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMM 440

Query: 365 NEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEM 424
            E+ I P+ VT  TLI+ + K     +A++V + ML  G+ +++F   +L++G  +  ++
Sbjct: 441 KERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKI 500

Query: 425 DIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRAL 484
           + A  L      +G S  + +Y+ L+DG     +     K   E + R +  D  VY   
Sbjct: 501 EEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVF 560

Query: 485 IRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL 544
           I   C   K   A+     M+  G+  D   Y ++  ++ R GE      +L +M    +
Sbjct: 561 INCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSI 620

Query: 545 MITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKEM 586
              L  Y +  A          LF +  V++   +K++  EM
Sbjct: 621 KPNLITYNTLVAG---------LFGTGAVEK---AKYLLNEM 650



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 109/392 (27%), Positives = 180/392 (45%), Gaps = 20/392 (5%)

Query: 164 HLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLL 223
           H+  CT L++SLAK      +  +  +MV  GVV ++  Y  L+    K    D+V+  L
Sbjct: 309 HVTYCT-LIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTL 367

Query: 224 CEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCRE 283
                 ++  +  TY  LI   CK     EA  V   ME + ISP++VT++S+I+GF + 
Sbjct: 368 RFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKR 427

Query: 284 G---RMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVT 340
           G   +  E +R+ ++ +G  PN VTY TLIDG+ +    + AL +   M  +GV      
Sbjct: 428 GLLDKATEYKRMMKE-RGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFI 486

Query: 341 YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML 400
            +S++  L + G+I +A  L  + +   ++ D+V   TLI+   K GD  +A K    ++
Sbjct: 487 VDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELM 546

Query: 401 EAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEE 460
           +  ++ D   Y   I+  C   +   AK  L  M + G  P   +Y+ ++  +C K    
Sbjct: 547 DRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETA 606

Query: 461 ALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLA 520
             LKLL E     +  ++  Y  L+        V+ A+ L N M   G    S+ +  + 
Sbjct: 607 KALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVL 666

Query: 521 YAYWRAGEPKACSDILDDMYRRRLMITLKIYR 552
                    +ACS        RRL + L I+ 
Sbjct: 667 ---------QACSQ------SRRLDVILDIHE 683



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 90/301 (29%), Positives = 142/301 (47%), Gaps = 10/301 (3%)

Query: 269 DIVTYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
           D  + N+L++  CR   +R A  L R  +   P  V Y  L+      +D   A  +   
Sbjct: 72  DPASLNALLYSHCRLRLLRPAIALLRSSR---PTTVAYNILLAAL---SDHAHAPAVLAE 125

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M  +GV    VT N++L  LC+ G++ DA   L +      A D +  NTLI  YC++GD
Sbjct: 126 MCKRGVPFDGVTVNTLLAGLCRNGQV-DAAAALADRGGGIHALDVIGWNTLIAGYCRVGD 184

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
           T +A+ V +RM   GL +D   Y  L+ GFC+A ++D A+ +L  M +AG  P+  +Y+ 
Sbjct: 185 TPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTP 244

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG 508
            +  YC     E    L +  V  G+ +DV    AL+   C+  +   A  LF  M   G
Sbjct: 245 FIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVG 304

Query: 509 ILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFS---ASYAKDNEIL 565
              + V Y +L  +  +AG  K    +L +M  R +++ L  Y +         K +E+ 
Sbjct: 305 AAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVK 364

Query: 566 D 566
           D
Sbjct: 365 D 365



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 74/315 (23%), Positives = 140/315 (44%), Gaps = 39/315 (12%)

Query: 106 LRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHL 165
           L  F    S L  +  +   PD +++  + +++ +     T   L++  +M++ ++ P+L
Sbjct: 567 LGKFKEAKSFLTEMRNMGLKPDQSTY--NTMIVSHCRKGETAKALKLLHEMKMSSIKPNL 624

Query: 166 HACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCE 225
                L+  L      +    +  +MV  G   +   +  ++ AC +S  +D +  +   
Sbjct: 625 ITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEW 684

Query: 226 MEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCRE-- 283
           M    + AD+  YNTL+ + C  GM  +A  V + M   GI+PD +T+N+LI G C+   
Sbjct: 685 MMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSH 744

Query: 284 ---------------------------------GRMREARRLFRDIK--GATPNHVTYTT 308
                                            GR+ EA  +  +++  G  PN++TY  
Sbjct: 745 LDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDI 804

Query: 309 LIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKK 368
           L  G+ + ++  EA+RL   M  KG  P V TYN+++    K G +  A  L  +M ++ 
Sbjct: 805 LATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRG 864

Query: 369 IAPDNVTCNTLINAY 383
           + P + T + L++ +
Sbjct: 865 VHPTSCTYDILVSGW 879



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 61/256 (23%), Positives = 108/256 (42%), Gaps = 23/256 (8%)

Query: 324 RLREVMAAKGVYPGVVTY--------NSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVT 375
           RL   +A  G+    + +        N++L   C+   +R A  LL     +   P  V 
Sbjct: 51  RLIPALATSGLAAAAIRFRPADPASLNALLYSHCRLRLLRPAIALL-----RSSRPTTVA 105

Query: 376 CNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGML 435
            N L+ A   + D A A  V   M + G+  D  T   L+ G C+  ++D A  L     
Sbjct: 106 YNILLAA---LSDHAHAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALA---- 158

Query: 436 DAG---FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKE 492
           D G    +     ++ L+ GYC   +  A L + D   ++GL +DV  Y  L+  FC+  
Sbjct: 159 DRGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAG 218

Query: 493 KVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYR 552
           +VD A+ + ++M+  G+  +   YT     Y R    +   D+ + M R  +++ +    
Sbjct: 219 QVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLS 278

Query: 553 SFSASYAKDNEILDLF 568
           +  A   +D    + +
Sbjct: 279 ALVAGLCRDGRFSEAY 294


>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
 gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
          Length = 468

 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 120/438 (27%), Positives = 206/438 (47%), Gaps = 6/438 (1%)

Query: 135 WLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMV-Q 193
           ++V   A   M    L+VF+ M+  + +P L    VL+NS            +++ M  +
Sbjct: 15  FVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSMKRE 74

Query: 194 LGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYE 253
             V  +   YN LI   C S + +   KLL EM  K++ A++FTY+++I    K+    E
Sbjct: 75  KRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKPEE 134

Query: 254 ALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLID 311
           +  V + M   G +PD+  +N ++ GF R   M +AR +++ +   G  P++V+Y  LI 
Sbjct: 135 SYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIH 194

Query: 312 GYCRANDLEEALRLREVMA--AKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI 369
           G  +   L+E+L++   MA  A G  P V+T+++++  LC+ G +  A  +   M E   
Sbjct: 195 GLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGC 254

Query: 370 APDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKE 429
            P+  T  TLI   C+      A ++  +M +A +  D   Y +LI G+CK   MD A++
Sbjct: 255 KPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEK 314

Query: 430 LLFGML-DAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRF 488
           L   M   AG  P+  +++ L+DG+C         +L+ E  ++GL  D   YR LI   
Sbjct: 315 LYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAGL 374

Query: 489 CKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITL 548
            +  K+D A  ++  M+    L D V   S      + G       + +   +   +   
Sbjct: 375 SRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNP 434

Query: 549 KIYRSFSASYAKDNEILD 566
           + +R  S S  K   + D
Sbjct: 435 ETFRILSESLIKLGRVED 452



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 104/361 (28%), Positives = 176/361 (48%), Gaps = 5/361 (1%)

Query: 146 TQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNV 205
           T+   ++  +MR  N+  ++   + ++ SL K+   +  +KV ++M+  G   ++  +N 
Sbjct: 97  TEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNG 156

Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRM--ER 263
           ++    +S++++K  ++   M     + D  +Y+ LI    K G   E+L +   M    
Sbjct: 157 VMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRA 216

Query: 264 EGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEE 321
            G  P+++T+++LIHG CR G + +A  +F  +   G  PN  TYTTLI G CRA  + +
Sbjct: 217 AGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQ 276

Query: 322 ALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKK-IAPDNVTCNTLI 380
           A  L E M    + P  V YNS++   CK G + +A +L  EM+    + P  VT NTLI
Sbjct: 277 ARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLI 336

Query: 381 NAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFS 440
           + +CK+G    A ++   M   GL  D  TY+ LI G  +A ++D A E+   M +  F 
Sbjct: 337 DGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFL 396

Query: 441 PSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRL 500
               S    V G C   N +    + +     G   +   +R L     K  +V+ AQ+L
Sbjct: 397 LDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKL 456

Query: 501 F 501
            
Sbjct: 457 M 457



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 97/368 (26%), Positives = 178/368 (48%), Gaps = 6/368 (1%)

Query: 203 YNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRME 262
           Y+ ++ +  K+  + +  ++   M+ +     L TYN LI   C  G   +AL +   M+
Sbjct: 13  YDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSMK 72

Query: 263 REG-ISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDL 319
           RE  + PD  TYN+LI G C  G    AR+L  ++  K    N  TY+++I    +    
Sbjct: 73  REKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKP 132

Query: 320 EEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTL 379
           EE+ ++ E M A G  P V  +N +++   +   +  A  +   M E    PDNV+ + L
Sbjct: 133 EESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHIL 192

Query: 380 INAYCKIGDTASAMKVKNRML--EAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA 437
           I+   KIG    ++K+ + M    AG + +  T+  LIHG C+  E++ A E+   ML+A
Sbjct: 193 IHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEA 252

Query: 438 GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYA 497
           G  P+  +Y+ L+ G C         +L ++     +  D   Y +LI  +CK+  +D A
Sbjct: 253 GCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEA 312

Query: 498 QRLFNLMQGNGILGDSVI-YTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSA 556
           ++L+  M G   L  +++ + +L   + + G+    ++++ +M  + L      YR   A
Sbjct: 313 EKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIA 372

Query: 557 SYAKDNEI 564
             ++  ++
Sbjct: 373 GLSRATKL 380



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 94/331 (28%), Positives = 161/331 (48%), Gaps = 5/331 (1%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           ++  +V ++M      P + A   ++   A+    +   +VY+ MV+ G   +   Y++L
Sbjct: 133 EESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHIL 192

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVR--ADLFTYNTLIALYCKKGMHYEALAVQDRMERE 264
           IH   K   +D+  K+L EM  +      ++ T++TLI   C+ G   +AL V   M   
Sbjct: 193 IHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEA 252

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIKGA--TPNHVTYTTLIDGYCRANDLEEA 322
           G  P+  TY +LI G CR  ++ +AR LF  +  A   P+ V Y +LI GYC+   ++EA
Sbjct: 253 GCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEA 312

Query: 323 LRL-REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
            +L RE+    G+ P +VT+N+++   CK G++  AN L+ EM  K +A D  T   LI 
Sbjct: 313 EKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIA 372

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
              +      A++V  +M E   +LD  +  + + G CK   +D A  +      +G  P
Sbjct: 373 GLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVP 432

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSR 472
           +  ++  L +        E   KL++   +R
Sbjct: 433 NPETFRILSESLIKLGRVEDAQKLMEPAKAR 463



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 100/378 (26%), Positives = 180/378 (47%), Gaps = 29/378 (7%)

Query: 80  SHWTMIHILTKNKHFKSAQNMLEKIALRD------FLSTPSVLNALVKIHDDPDGNSHVL 133
           ++ T+I  L  + + + A+ +L +  +RD        +  S++ +LVK    P+ +  VL
Sbjct: 83  TYNTLISGLCSSGNTEGARKLLSE--MRDKNIAANVFTYSSIIKSLVK-EAKPEESYKVL 139

Query: 134 SWLV-------IFYANLKMT--------QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKD 178
             ++       +F  N  M         +   +V+  M      P   +  +L++ LAK 
Sbjct: 140 EEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKI 199

Query: 179 RLTDMVWKVYKKMV--QLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLF 236
              D   K+  +M     G V N+  ++ LIH  C++ +++K  ++   M     + + +
Sbjct: 200 GKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKY 259

Query: 237 TYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI 296
           TY TLIA  C+     +A  + ++M +  I PD V YNSLI G+C+ G M EA +L+R++
Sbjct: 260 TYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREM 319

Query: 297 KGAT---PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGR 353
            G     P  VT+ TLIDG+C+   L  A  L   M  KG+     TY  ++  L +  +
Sbjct: 320 SGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAGLSRATK 379

Query: 354 IRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKA 413
           + +A  +  +M EKK   D V+C + +   CK G+   A  V     ++G + +  T++ 
Sbjct: 380 LDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRI 439

Query: 414 LIHGFCKAKEMDIAKELL 431
           L     K   ++ A++L+
Sbjct: 440 LSESLIKLGRVEDAQKLM 457



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 74/300 (24%), Positives = 129/300 (43%), Gaps = 18/300 (6%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHV 132
            YK    S+  +IH L K      +  +L ++A+R     P+V+                
Sbjct: 181 GYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVI---------------T 225

Query: 133 LSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMV 192
            S L+         +  L+VF  M      P+ +  T L+  L +        ++++KM 
Sbjct: 226 FSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMT 285

Query: 193 QLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEME-FKDVRADLFTYNTLIALYCKKGMH 251
           Q  +  +   YN LI   CK   +D+ EKL  EM     ++  + T+NTLI  +CK G  
Sbjct: 286 QACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKL 345

Query: 252 YEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTL 309
             A  +   M  +G++ D  TY  LI G  R  ++ EA  +++ +  K    + V+  + 
Sbjct: 346 GRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSF 405

Query: 310 IDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI 369
           + G C+  ++++A  + E     G  P   T+  +   L K GR+ DA +L+     + I
Sbjct: 406 VGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLMEPAKARDI 465



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/164 (23%), Positives = 70/164 (42%), Gaps = 1/164 (0%)

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
           M++ K A      + ++ +  K G  A A++V   M     +    TY  LI+  C A E
Sbjct: 1   MSKAKCAIGGDAYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGE 60

Query: 424 MDIAKELLFGM-LDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYR 482
              A +L   M  +    P   +Y+ L+ G C+  N E   KLL E   + +  +V  Y 
Sbjct: 61  FGKALDLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYS 120

Query: 483 ALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRA 526
           ++I+   K+ K + + ++   M   G   D   +  +   + R+
Sbjct: 121 SIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARS 164


>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Brachypodium distachyon]
          Length = 757

 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 115/428 (26%), Positives = 201/428 (46%), Gaps = 3/428 (0%)

Query: 140 YANLKMTQDGLQ-VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVA 198
           YA L++  D    V +Q+ +  +  +      LL  LA+     ++   Y +M   G+  
Sbjct: 135 YARLQLFDDAFDLVSNQLDMFGVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEP 194

Query: 199 NIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQ 258
           ++  +N +I A C++        +L EM   DV  D  T+ TL+  + ++G    AL ++
Sbjct: 195 DVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLK 254

Query: 259 DRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRA 316
            RM   G SP  VT N LI+G+C+ GR+ +A    +     G  P+ VT++T ++G C+ 
Sbjct: 255 ARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQN 314

Query: 317 NDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTC 376
             ++ AL++  +M  +G  P V TY++++  LC  G + +A  ++N+M +    PD  T 
Sbjct: 315 GHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTF 374

Query: 377 NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD 436
           NTLI A C       A+ +   +   GL  + +T+  LI+  CK  +  +A  L   M  
Sbjct: 375 NTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKS 434

Query: 437 AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDY 496
           +G +P   +Y+ L+D  C+       L LL E    G       Y  +I   CK+ +++ 
Sbjct: 435 SGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEE 494

Query: 497 AQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSA 556
           A+ +F+ M   GI  +++ + +L      A      ++++D M    L      Y S   
Sbjct: 495 AEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILT 554

Query: 557 SYAKDNEI 564
            Y K   I
Sbjct: 555 HYCKQGNI 562



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 118/422 (27%), Positives = 192/422 (45%), Gaps = 5/422 (1%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           + ++M   ++ P     T L+    ++   +   ++  +M ++G        NVLI+  C
Sbjct: 218 MLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYC 277

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           K   V      + +        D  T++T +   C+ G    AL V   M +EG  PD+ 
Sbjct: 278 KLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVY 337

Query: 272 TYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           TY+++I+  C  G + EA+ +   +   G  P+  T+ TLI   C  N LEEAL L   +
Sbjct: 338 TYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLAREL 397

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
             KG+ P V T+N ++  LCK G    A RL  EM      PD VT N LI+  C  G  
Sbjct: 398 TVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKL 457

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
           A A+ +   M  +G      TY  +I G CK + ++ A+E+   M   G   +  +++ L
Sbjct: 458 AKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTL 517

Query: 450 VDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGI 509
           +DG CN    +   +L+D+ +S GL  +   Y +++  +CK+  +  A  +   M  NG 
Sbjct: 518 IDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGF 577

Query: 510 LGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDN---EILD 566
             D V Y +L     +A   +A   +L  M  + +  T K Y     S  + N   + L 
Sbjct: 578 EVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALS 637

Query: 567 LF 568
           LF
Sbjct: 638 LF 639



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 119/426 (27%), Positives = 197/426 (46%), Gaps = 3/426 (0%)

Query: 130 SHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYK 189
           S  ++ L+  Y  L    D L    Q       P     +  +N L ++   D   KV  
Sbjct: 266 SVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLG 325

Query: 190 KMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKG 249
            M+Q G   +++ Y+ +I+  C + ++++ + ++ +M       D  T+NTLI   C + 
Sbjct: 326 LMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTEN 385

Query: 250 MHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYT 307
              EAL +   +  +G+SP++ T+N LI+  C+ G    A RLF ++K  G TP+ VTY 
Sbjct: 386 QLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYN 445

Query: 308 TLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEK 367
            LID  C +  L +AL L + M   G     VTYN+I+  LCK  RI +A  + ++M+  
Sbjct: 446 ILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVT 505

Query: 368 KIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIA 427
            I  + +T NTLI+  C       A ++ ++M+  GL  +  TY +++  +CK   +  A
Sbjct: 506 GIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKA 565

Query: 428 KELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRR 487
            ++L  M   GF     +Y+ L++G C     +A LKLL     +G+      Y  +I+ 
Sbjct: 566 ADILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQS 625

Query: 488 FCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEP-KACSDILDDMYRRRLMI 546
             +      A  LF  M   G   D+  Y  +     R G P K   D L +M     + 
Sbjct: 626 LFRGNNGRDALSLFREMTEVGGPPDAFTYKIVFRGLCRGGGPIKEAFDFLVEMADNGFIP 685

Query: 547 TLKIYR 552
               +R
Sbjct: 686 EFSSFR 691



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 97/383 (25%), Positives = 165/383 (43%), Gaps = 38/383 (9%)

Query: 195 GVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEA 254
           G+  +  +Y  +I     +   D ++ L+ EM  +     L    + I  Y +  +  +A
Sbjct: 85  GLTPSRDVYEEIIRKLGTAGAFDLMKVLVGEMRREGHEVGLGLVQSFIGSYARLQLFDDA 144

Query: 255 L-AVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLID 311
              V ++++  G+  +   YN L+       +++     + ++  +G  P+ VT+ T+ID
Sbjct: 145 FDLVSNQLDMFGVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVID 204

Query: 312 GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAP 371
             CRA     A+ + E M++  V P   T+ +++    +EG I  A RL   M+E   +P
Sbjct: 205 ALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSP 264

Query: 372 DNVTCNTLINAYCKIGDTAS-----------------------------------AMKVK 396
            +VT N LIN YCK+G                                       A+KV 
Sbjct: 265 TSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVL 324

Query: 397 NRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNK 456
             ML+ G   D +TY  +I+  C   E++ AK ++  M+D+G  P   +++ L+   C +
Sbjct: 325 GLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTE 384

Query: 457 NNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIY 516
           N  E  L L  E   +GL  +V  +  LI   CK      A RLF  M+ +G   D V Y
Sbjct: 385 NQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTY 444

Query: 517 TSLAYAYWRAGEPKACSDILDDM 539
             L      +G+     D+L +M
Sbjct: 445 NILIDNLCSSGKLAKALDLLKEM 467



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 69/310 (22%), Positives = 127/310 (40%), Gaps = 6/310 (1%)

Query: 264 EGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEE 321
           +G++P    Y  +I      G     + L  +++  G         + I  Y R    ++
Sbjct: 84  DGLTPSRDVYEEIIRKLGTAGAFDLMKVLVGEMRREGHEVGLGLVQSFIGSYARLQLFDD 143

Query: 322 ALRL-REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLI 380
           A  L    +   GV      YN +L  L +  +I+       EM+ + I PD VT NT+I
Sbjct: 144 AFDLVSNQLDMFGVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVI 203

Query: 381 NAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFS 440
           +A C+     +A+ +   M    +  D+ T+  L+ GF +   ++ A  L   M + G S
Sbjct: 204 DALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCS 263

Query: 441 PSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRL 500
           P+  + + L++GYC        L  + + ++ G   D   +   +   C+   VD+A ++
Sbjct: 264 PTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKV 323

Query: 501 FNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAK 560
             LM   G   D   Y+++       GE +    I++ M     +     + +   +   
Sbjct: 324 LGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCT 383

Query: 561 DN---EILDL 567
           +N   E LDL
Sbjct: 384 ENQLEEALDL 393



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 58/264 (21%), Positives = 97/264 (36%), Gaps = 20/264 (7%)

Query: 52  NCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLS 111
           N C    L+ A     E  V     S  ++ T+I  L K +  + A+ + +++ +     
Sbjct: 450 NLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGR 509

Query: 112 TPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVL 171
                N L+      DG             N +   D  ++ DQM    L P+      +
Sbjct: 510 NAITFNTLI------DG-----------LCNAERIDDAAELVDQMISEGLQPNNVTYNSI 552

Query: 172 LNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDV 231
           L    K         + + M   G   ++  Y  LI+  CK+       KLL  M  K +
Sbjct: 553 LTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGM 612

Query: 232 RADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR-EGRMREAR 290
           +     YN +I    +     +AL++   M   G  PD  TY  +  G CR  G ++EA 
Sbjct: 613 KPTPKAYNPVIQSLFRGNNGRDALSLFREMTEVGGPPDAFTYKIVFRGLCRGGGPIKEAF 672

Query: 291 RLFRDI--KGATPNHVTYTTLIDG 312
               ++   G  P   ++  L +G
Sbjct: 673 DFLVEMADNGFIPEFSSFRMLAEG 696


>gi|218194637|gb|EEC77064.1| hypothetical protein OsI_15455 [Oryza sativa Indica Group]
          Length = 864

 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 117/451 (25%), Positives = 207/451 (45%), Gaps = 40/451 (8%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           +F +M    ++P +  C  ++  L K +  D    + +KMV  G+  ++  Y+++I   C
Sbjct: 212 LFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLC 271

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           KS  +DK E++L +M     R +  TYN+LI  Y   GM  E++ V  +M   G+ P + 
Sbjct: 272 KSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVD 331

Query: 272 TYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRAND--LEEALRLRE 327
             NS IH   + GR  EA+ +F    +KG  P+ ++Y+T++ GY  A D  L +   +  
Sbjct: 332 NCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFN 391

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
           +M  KG+ P    +N ++    + G +  A  +  +M  K + PD VT  T+I++ C+IG
Sbjct: 392 LMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIG 451

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD----------- 436
               A+   N M++ G+   +  Y  LI G C   E+  AKEL+  M++           
Sbjct: 452 RLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYF 511

Query: 437 -------------------------AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
                                     G  P+  +++ L++GYC   N E    LLD   S
Sbjct: 512 SSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMAS 571

Query: 472 RGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKA 531
            G+  +  +Y  L+  +CK  ++D A  +F  M   G+   SV+Y+ + +  ++A    A
Sbjct: 572 IGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTA 631

Query: 532 CSDILDDMYRRRLMITLKIYRSFSASYAKDN 562
              +  +M      +++  Y        ++N
Sbjct: 632 AKKMFHEMIESGTTVSIHTYGVVLGGLCRNN 662



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 103/445 (23%), Positives = 195/445 (43%), Gaps = 38/445 (8%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAK-DRLTDMVWKV 187
           N HV + L+  YA   M    + +F+ M+   ++P       +++SL +  RL D + K 
Sbjct: 401 NKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHK- 459

Query: 188 YKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCK 247
           +  MV +GV  +  +Y  LI  CC   ++ K ++L+ EM  KD+                
Sbjct: 460 FNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIP--------------- 504

Query: 248 KGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVT 305
                               P +  ++S+I+  C+EGR+ E + +   +   G  PN VT
Sbjct: 505 -------------------PPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVT 545

Query: 306 YTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMN 365
           + +L++GYC   ++EEA  L + MA+ G+ P    Y +++   CK GRI DA  +  +M 
Sbjct: 546 FNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDML 605

Query: 366 EKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMD 425
            K + P +V  + +++   +   T +A K+ + M+E+G  +   TY  ++ G C+    D
Sbjct: 606 HKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTD 665

Query: 426 IAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
            A  LL  +          +++ ++         +   +L D   + GL  ++  Y  +I
Sbjct: 666 EANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMI 725

Query: 486 RRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
               K+E  + A  LF  ++ +G   DS +   +        E    S+ L  +    L 
Sbjct: 726 TNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLT 785

Query: 546 ITLKIYRSFSASYAKDNEILDLFWS 570
           +        ++ ++++  I  LF +
Sbjct: 786 LEASTISLLASLFSREGMIKGLFGT 810



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 78/297 (26%), Positives = 148/297 (49%), Gaps = 5/297 (1%)

Query: 235 LFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR 294
           + TYN LI  Y +       LA+  R+ + G+ PD  +Y SLI+GF ++G + +A  LF 
Sbjct: 156 IHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDKAHCLFL 214

Query: 295 DI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEG 352
           ++  +G  P  +   ++I   C+  ++++A  + + M   G+ P + TY+ I+  LCK  
Sbjct: 215 EMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSK 274

Query: 353 RIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYK 412
            +  A R+L +M E    P+++T N+LI+ Y   G    +++V  +M   G++       
Sbjct: 275 AMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCN 334

Query: 413 ALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNE--EALLKLLDEFV 470
           + IH   K    + AK +   M+  G  P   SYS ++ GY    +     +  + +  +
Sbjct: 335 SFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLML 394

Query: 471 SRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
           ++G+  +  V+  LI  + +   +D A  +F  MQ  G++ D+V + ++  +  R G
Sbjct: 395 TKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIG 451



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 76/291 (26%), Positives = 142/291 (48%), Gaps = 15/291 (5%)

Query: 299 ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDAN 358
           + P   TY  LID Y R +  +  L +   +   G+ P   +Y S++    K+G +  A+
Sbjct: 152 SPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDKAH 210

Query: 359 RLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGF 418
            L  EM E+ + P  + CN++I   CK+ +   A  +  +M+++G+  D FTY  +I G 
Sbjct: 211 CLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGL 270

Query: 419 CKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDV 478
           CK+K MD A+ +L  M++AG  P+  +Y+ L+ GY         +++  +  S G+   V
Sbjct: 271 CKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTV 330

Query: 479 SVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDD 538
               + I    K  + + A+ +F+ M   G   D + Y+++ + Y  A +  +C   + +
Sbjct: 331 DNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATD--SCLADVHN 388

Query: 539 MYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKH--IFKEMQ 587
           ++   LM+T  I        A +  + ++  +     G+M K   IF++MQ
Sbjct: 389 IF--NLMLTKGI--------APNKHVFNILINAYARCGMMDKAMLIFEDMQ 429


>gi|48716316|dbj|BAD22929.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|48717088|dbj|BAD22861.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
          Length = 933

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 115/414 (27%), Positives = 203/414 (49%), Gaps = 37/414 (8%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           L +  +M    ++  L   T L++ L K   TD V    +  +   +  N   Y VLI A
Sbjct: 329 LSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDA 388

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
            CK+ +VD+ E++L EME K +  ++ T++++I  + K+G+  +A   +  M+  GI+P+
Sbjct: 389 LCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPN 448

Query: 270 IVTYNSLIHGFCR-----------------------------------EGRMREARRLFR 294
           +VTY +LI GF +                                    G++ EA  LF+
Sbjct: 449 VVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFK 508

Query: 295 DIKGA--TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEG 352
           D  G+  + +HV YTTLIDG  +A D+  A +  + +  + + P  V YN  +  LC  G
Sbjct: 509 DASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLG 568

Query: 353 RIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYK 412
           + ++A   L EM    + PD  T NT+I ++C+ G+TA A+K+ + M  + +  +  TY 
Sbjct: 569 KFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYN 628

Query: 413 ALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSR 472
            L+ G      ++ AK LL  M+ AGFSPS  ++  ++         + +L + +  ++ 
Sbjct: 629 TLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNA 688

Query: 473 GLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRA 526
           GL  D++VY  L++  C       A  +   M G+GI  D++ + +L   + ++
Sbjct: 689 GLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKS 742



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 111/376 (29%), Positives = 188/376 (50%), Gaps = 2/376 (0%)

Query: 181 TDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNT 240
           T     V  +M   G+  ++  YN L+   C++  VD    +L  M+   V  ++ TY  
Sbjct: 185 TPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTP 244

Query: 241 LIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--G 298
            I  YC+     EA  + + M R G+  D+VT ++L+ G CR+GR  EA  LFR++   G
Sbjct: 245 FIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVG 304

Query: 299 ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDAN 358
           A PNHVTY TLID   +A   +E L L   M ++GV   +VTY +++  L K+G+  +  
Sbjct: 305 AAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVK 364

Query: 359 RLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGF 418
             L       ++P+ VT   LI+A CK  +   A +V   M E  +  +  T+ ++I+GF
Sbjct: 365 DTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGF 424

Query: 419 CKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDV 478
            K   +D A E    M + G +P+  +Y  L+DG+     ++A L++  + +  G+ V+ 
Sbjct: 425 VKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNK 484

Query: 479 SVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDD 538
            +  +L+    +  K++ A  LF    G+G+  D V YT+L    ++AG+         +
Sbjct: 485 FIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQE 544

Query: 539 MYRRRLMITLKIYRSF 554
           +  R ++    +Y  F
Sbjct: 545 LMDRNMLPDAVVYNVF 560



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 104/376 (27%), Positives = 178/376 (47%), Gaps = 2/376 (0%)

Query: 169 TVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEF 228
           T L++ L K       +K  ++++   ++ +  +YNV I+  C      + +  L EM  
Sbjct: 523 TTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRN 582

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
             ++ D  TYNT+I  +C+KG   +AL +   M+   I P+++TYN+L+ G    G + +
Sbjct: 583 MGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEK 642

Query: 289 ARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILR 346
           A+ L  ++   G +P+ +T+  ++    ++  L+  L + E M   G++  +  YN++L+
Sbjct: 643 AKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQ 702

Query: 347 KLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLML 406
            LC  G  R A  +L EM    IAPD +T N LI  +CK     +A     +ML   +  
Sbjct: 703 VLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISP 762

Query: 407 DQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLL 466
           +  T+  L+ G      +  A  +L  M  +G  P+  +Y  L  G+  ++N+   ++L 
Sbjct: 763 NIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLY 822

Query: 467 DEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRA 526
            E V +G    VS Y ALI  F K   +  A+ LF  MQ  G+   S  Y  L   + R 
Sbjct: 823 CEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRI 882

Query: 527 GEPKACSDILDDMYRR 542
                    L DM  +
Sbjct: 883 RNGTEVKKCLKDMKEK 898



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 138/582 (23%), Positives = 253/582 (43%), Gaps = 41/582 (7%)

Query: 28  KLLNPNIA---SSLTSTAIHKVLLN-LYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWT 83
           +LL P IA   SS  +T  + +LL  L +  H P++     +  +  VP    ++    T
Sbjct: 87  RLLRPAIALLRSSRPTTVAYNILLAALSDHAHAPAV---LAEMCKRGVPFDGVTVN---T 140

Query: 84  MIHILTKNKHFKSAQNMLEK---IALRDFLSTPSVLNALVKIHDDPDG-------NSHVL 133
           ++  L +N    +A  + ++   I   D +   +++    ++ D P          +  L
Sbjct: 141 LLAGLCRNGQVDAAAALADRGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGL 200

Query: 134 SWLVIFYANL-------KMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWK 186
              V+ Y  L               V D M+   + P++   T  +    + +  +  + 
Sbjct: 201 PMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFD 260

Query: 187 VYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYC 246
           +Y+ MV+ GV+ ++   + L+   C+     +   L  EM+      +  TY TLI    
Sbjct: 261 LYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLA 320

Query: 247 KKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHV 304
           K G   E L++   M   G+  D+VTY +L+    ++G+  E +   R       +PN V
Sbjct: 321 KAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGV 380

Query: 305 TYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM 364
           TYT LID  C+A++++EA ++   M  K + P VVT++S++    K G +  A      M
Sbjct: 381 TYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMM 440

Query: 365 NEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEM 424
            E+ I P+ VT  TLI+ + K     +A++V + ML  G+ +++F   +L++G  +  ++
Sbjct: 441 KERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKI 500

Query: 425 DIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRAL 484
           + A  L      +G S  + +Y+ L+DG     +     K   E + R +  D  VY   
Sbjct: 501 EEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVF 560

Query: 485 IRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL 544
           I   C   K   A+     M+  G+  D   Y ++  ++ R GE      +L +M    +
Sbjct: 561 INCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSI 620

Query: 545 MITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKEM 586
              L  Y +  A          LF +  V++   +K++  EM
Sbjct: 621 KPNLITYNTLVAG---------LFGTGAVEK---AKYLLNEM 650



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 102/379 (26%), Positives = 161/379 (42%), Gaps = 37/379 (9%)

Query: 160 NLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKV 219
           N++P      V +N L              +M  +G+  +   YN +I + C+  +  K 
Sbjct: 549 NMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKA 608

Query: 220 EKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISP----------- 268
            KLL EM+   ++ +L TYNTL+A     G   +A  + + M   G SP           
Sbjct: 609 LKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQA 668

Query: 269 ------------------------DIVTYNSLIHGFCREGRMREARRLFRDI--KGATPN 302
                                   DI  YN+L+   C  G  R+A  +  ++   G  P+
Sbjct: 669 CSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPD 728

Query: 303 HVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLN 362
            +T+  LI G+C+++ L+ A      M  + + P + T+N++L  L   GRI +A  +L 
Sbjct: 729 TITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLI 788

Query: 363 EMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAK 422
           EM +  + P+N+T + L   + K  +   AM++   M+  G +    TY ALI  F KA 
Sbjct: 789 EMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAG 848

Query: 423 EMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYR 482
            M  AKEL   M   G  P+ C+Y  LV G+    N   + K L +   +G         
Sbjct: 849 MMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLS 908

Query: 483 ALIRRFCKKEKVDYAQRLF 501
            + R F K      AQRL 
Sbjct: 909 FICRAFSKPGMTWQAQRLL 927



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 112/405 (27%), Positives = 185/405 (45%), Gaps = 21/405 (5%)

Query: 152 VFDQMRVHNLMP-HLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           +F +M      P H+  CT L++SLAK      +  +  +MV  GVV ++  Y  L+   
Sbjct: 296 LFREMDKVGAAPNHVTYCT-LIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWL 354

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
            K    D+V+  L      ++  +  TY  LI   CK     EA  V   ME + ISP++
Sbjct: 355 GKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNV 414

Query: 271 VTYNSLIHGFCREG---RMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLRE 327
           VT++S+I+GF + G   +  E +R+ ++ +G  PN VTY TLIDG+ +    + AL +  
Sbjct: 415 VTFSSVINGFVKRGLLDKATEYKRMMKE-RGINPNVVTYGTLIDGFFKFQGQDAALEVYH 473

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
            M  +GV       +S++  L + G+I +A  L  + +   ++ D+V   TLI+   K G
Sbjct: 474 DMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAG 533

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
           D  +A K    +++  ++ D   Y   I+  C   +   AK  L  M + G  P   +Y+
Sbjct: 534 DMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYN 593

Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGN 507
            ++  +C K      LKLL E     +  ++  Y  L+        V+ A+ L N M   
Sbjct: 594 TMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSA 653

Query: 508 GILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYR 552
           G    S+ +  +          +ACS        RRL + L I+ 
Sbjct: 654 GFSPSSLTHRRVL---------QACSQ------SRRLDVILDIHE 683



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 90/301 (29%), Positives = 142/301 (47%), Gaps = 10/301 (3%)

Query: 269 DIVTYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
           D  + N+L++  CR   +R A  L R  +   P  V Y  L+      +D   A  +   
Sbjct: 72  DPASLNALLYSHCRLRLLRPAIALLRSSR---PTTVAYNILLAAL---SDHAHAPAVLAE 125

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M  +GV    VT N++L  LC+ G++ DA   L +      A D +  NTLI  YC++GD
Sbjct: 126 MCKRGVPFDGVTVNTLLAGLCRNGQV-DAAAALADRGGGIHALDVIGWNTLIAGYCRVGD 184

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
           T +A+ V +RM   GL +D   Y  L+ GFC+A ++D A+ +L  M +AG  P+  +Y+ 
Sbjct: 185 TPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTP 244

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG 508
            +  YC     E    L +  V  G+ +DV    AL+   C+  +   A  LF  M   G
Sbjct: 245 FIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVG 304

Query: 509 ILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFS---ASYAKDNEIL 565
              + V Y +L  +  +AG  K    +L +M  R +++ L  Y +         K +E+ 
Sbjct: 305 AAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVK 364

Query: 566 D 566
           D
Sbjct: 365 D 365



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 87/346 (25%), Positives = 158/346 (45%), Gaps = 4/346 (1%)

Query: 106 LRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHL 165
           L  F    S L  +  +   PD +++  + +++ +     T   L++  +M++ ++ P+L
Sbjct: 567 LGKFKEAKSFLTEMRNMGLKPDQSTY--NTMIVSHCRKGETAKALKLLHEMKMSSIKPNL 624

Query: 166 HACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCE 225
                L+  L      +    +  +MV  G   +   +  ++ AC +S  +D +  +   
Sbjct: 625 ITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEW 684

Query: 226 MEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGR 285
           M    + AD+  YNTL+ + C  GM  +A  V + M   GI+PD +T+N+LI G C+   
Sbjct: 685 MMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSH 744

Query: 286 MREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNS 343
           +  A   +  +  +  +PN  T+ TL+ G      + EA  +   M   G+ P  +TY+ 
Sbjct: 745 LDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDI 804

Query: 344 ILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAG 403
           +     K+    +A RL  EM  K   P   T N LI+ + K G    A ++   M + G
Sbjct: 805 LATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRG 864

Query: 404 LMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
           +     TY  L+ G+ + +     K+ L  M + GFSPS  + S++
Sbjct: 865 VHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFI 910



 Score = 75.5 bits (184), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 61/256 (23%), Positives = 108/256 (42%), Gaps = 23/256 (8%)

Query: 324 RLREVMAAKGVYPGVVTY--------NSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVT 375
           RL   +A  G+    + +        N++L   C+   +R A  LL     +   P  V 
Sbjct: 51  RLIPALATSGLAAAAIRFRPADPASLNALLYSHCRLRLLRPAIALL-----RSSRPTTVA 105

Query: 376 CNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGML 435
            N L+ A   + D A A  V   M + G+  D  T   L+ G C+  ++D A  L     
Sbjct: 106 YNILLAA---LSDHAHAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALA---- 158

Query: 436 DAG---FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKE 492
           D G    +     ++ L+ GYC   +  A L + D   ++GL +DV  Y  L+  FC+  
Sbjct: 159 DRGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAG 218

Query: 493 KVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYR 552
           +VD A+ + ++M+  G+  +   YT     Y R    +   D+ + M R  +++ +    
Sbjct: 219 QVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLS 278

Query: 553 SFSASYAKDNEILDLF 568
           +  A   +D    + +
Sbjct: 279 ALVAGLCRDGRFSEAY 294


>gi|297724361|ref|NP_001174544.1| Os05g0583900 [Oryza sativa Japonica Group]
 gi|42491383|gb|AAS16889.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|255676609|dbj|BAH93272.1| Os05g0583900 [Oryza sativa Japonica Group]
          Length = 467

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 108/341 (31%), Positives = 169/341 (49%), Gaps = 2/341 (0%)

Query: 167 ACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEM 226
           ACT L+N   K        +V+ +M  LG+  N   Y  L+H        +K   L  EM
Sbjct: 40  ACTALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALFEEM 99

Query: 227 EFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRM 286
               V  +L+TYN LI  +C+ G    A ++ D M   GI  ++V+YN+LI G CR G++
Sbjct: 100 RRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKL 159

Query: 287 REARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSI 344
            +A +L   ++  G  P+ +T+  L+DGY +A  +  AL     M A G  P  VTYN +
Sbjct: 160 WDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNML 219

Query: 345 LRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGL 404
           +   C+   +  ANR L++M E+ + P  VT   LI+++ +      A ++   M +AGL
Sbjct: 220 IAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGL 279

Query: 405 MLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLK 464
            +D  TY  L+   C    M  A++L   M + G  PS   Y  ++ GY  + +    LK
Sbjct: 280 EVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALK 339

Query: 465 LLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           L+ E   +GL  + + Y   IR  CK +K   A+ L + M+
Sbjct: 340 LIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEAEALLDDME 380



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 109/352 (30%), Positives = 174/352 (49%), Gaps = 10/352 (2%)

Query: 211 CKSSDVDKVEKLLCE-MEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
           C + DV     +L    +  D   D+     L+   CK G   EA  V D M   G++P+
Sbjct: 13  CAAGDVRSALAMLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRVFDEMPLLGLAPN 72

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLRE 327
            VTY +L+HG+   G+  +   LF +++  G  PN  TY  LI  +CR  + E A  L +
Sbjct: 73  EVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFD 132

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
            M  +G+   VV+YN+++  LC+ G++ DA +LL+ M  +   P  +T N L++ Y K G
Sbjct: 133 EMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAG 192

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
             ++A+   N+M  AG      TY  LI GFC+A++M  A   L  M + G  P+  +Y+
Sbjct: 193 KMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYT 252

Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGN 507
            L+D +  +N+     ++L      GL VD   Y  L+R  C +  +  A++LF  M   
Sbjct: 253 ILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEK 312

Query: 508 GILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYA 559
           G+   +VIY  + Y Y R G       ++ +M ++ L+         SASY 
Sbjct: 313 GVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLIPN-------SASYG 357



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 99/337 (29%), Positives = 158/337 (46%), Gaps = 2/337 (0%)

Query: 205 VLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMERE 264
            L++ CCK  DV +  ++  EM    +  +  TY  L+  Y   G   +  A+ + M R 
Sbjct: 43  ALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALFEEMRRG 102

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEA 322
           G+ P++ TYN LI  +CR G    AR LF +  ++G   N V+Y TLI G CR   L +A
Sbjct: 103 GVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDA 162

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            +L ++M  +G  P ++T+N ++    K G++ +A    N+M      P  VT N LI  
Sbjct: 163 AKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAG 222

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +C+  D   A +  + M E GL   + TY  LI  F +   M  A E+L GM  AG    
Sbjct: 223 FCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVD 282

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y  LV   C + N +   KL      +G+     +Y  +I  + ++     A +L  
Sbjct: 283 AHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIM 342

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
            M+  G++ +S  Y        +  + +    +LDDM
Sbjct: 343 EMRQKGLIPNSASYGLTIRVLCKDDKCQEAEALLDDM 379



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 92/287 (32%), Positives = 140/287 (48%), Gaps = 2/287 (0%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           + G  +F++MR   + P+L+    L+    +    +    ++ +M   G+V N+  YN L
Sbjct: 90  EKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTL 149

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           I   C+   +    KLL  M  +  R  + T+N L+  Y K G    AL   ++M+  G 
Sbjct: 150 IAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGF 209

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALR 324
            P  VTYN LI GFCR   M  A R   D+K  G  P  VTYT LID + R N + +A  
Sbjct: 210 QPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFE 269

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           +   M   G+     TY  ++R LC EG ++DA +L   M EK + P NV  + +I  Y 
Sbjct: 270 ILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYG 329

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
           + G +  A+K+   M + GL+ +  +Y   I   CK  +   A+ LL
Sbjct: 330 REGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEAEALL 376



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 93/321 (28%), Positives = 156/321 (48%), Gaps = 2/321 (0%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           +VFD+M +  L P+    T L++        +  + ++++M + GV  N++ YN LI   
Sbjct: 59  RVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEW 118

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           C++ + ++   L  EM  + +  ++ +YNTLIA  C+ G  ++A  + D M  EG  P I
Sbjct: 119 CRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSI 178

Query: 271 VTYNSLIHGFCREGRMREARRLFRDIKGA--TPNHVTYTTLIDGYCRANDLEEALRLREV 328
           +T+N L+ G+ + G+M  A   F  +K A   P+ VTY  LI G+CRA D+  A R    
Sbjct: 179 ITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSD 238

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M  +G+ P  VTY  ++    +E  +  A  +L  M +  +  D  T   L+ A C  G+
Sbjct: 239 MKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGN 298

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
              A K+   M E G+      Y  +I+G+ +      A +L+  M   G  P+  SY  
Sbjct: 299 MKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSASYGL 358

Query: 449 LVDGYCNKNNEEALLKLLDEF 469
            +   C  +  +    LLD+ 
Sbjct: 359 TIRVLCKDDKCQEAEALLDDM 379



 Score = 92.0 bits (227), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 70/260 (26%), Positives = 109/260 (41%), Gaps = 9/260 (3%)

Query: 314 CRANDLEEALRLREVMAAKGVYPG-----VVTYNSILRKLCKEGRIRDANRLLNEMNEKK 368
           C A D+  AL     M A+G   G     V    +++   CK G + +A R+ +EM    
Sbjct: 13  CAAGDVRSAL----AMLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRVFDEMPLLG 68

Query: 369 IAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAK 428
           +AP+ VT   L++ Y   G       +   M   G+  + +TY  LI  +C+  E + A+
Sbjct: 69  LAPNEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERAR 128

Query: 429 ELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRF 488
            L   M   G   +  SY+ L+ G C         KLLD   + G    +  +  L+  +
Sbjct: 129 SLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGY 188

Query: 489 CKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITL 548
            K  K+  A   FN M+  G    +V Y  L   + RA +    +  L DM  R L  T 
Sbjct: 189 GKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTK 248

Query: 549 KIYRSFSASYAKDNEILDLF 568
             Y     S+A++N +   F
Sbjct: 249 VTYTILIDSFARENHMGKAF 268



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 66/289 (22%), Positives = 116/289 (40%), Gaps = 24/289 (8%)

Query: 48  LNLYNC-----CHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLE 102
           L  YNC     C       A   + E  V     ++ S+ T+I  L ++     A  +L+
Sbjct: 108 LYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLD 167

Query: 103 KIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLM 162
              +R   + PS++                 + LV  Y       + L  F+QM+     
Sbjct: 168 --MMRTEGTRPSII---------------TFNLLVDGYGKAGKMSNALPFFNQMKAAGFQ 210

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
           P      +L+    + R      +    M + G+      Y +LI +  + + + K  ++
Sbjct: 211 PSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEI 270

Query: 223 LCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR 282
           L  ME   +  D  TY  L+   C +G   +A  +   M  +G+ P  V Y+ +I+G+ R
Sbjct: 271 LAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGR 330

Query: 283 EGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           EG   +A +L  ++  KG  PN  +Y   I   C+ +  +EA  L + M
Sbjct: 331 EGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEAEALLDDM 379



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/147 (25%), Positives = 70/147 (47%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           +    M+   L P     T+L++S A++      +++   M + G+  + H Y VL+ A 
Sbjct: 234 RALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRAL 293

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           C   ++    KL   M  K V      Y+ +I  Y ++G  Y+AL +   M ++G+ P+ 
Sbjct: 294 CMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLIPNS 353

Query: 271 VTYNSLIHGFCREGRMREARRLFRDIK 297
            +Y   I   C++ + +EA  L  D++
Sbjct: 354 ASYGLTIRVLCKDDKCQEAEALLDDME 380


>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
          Length = 700

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 109/406 (26%), Positives = 202/406 (49%), Gaps = 2/406 (0%)

Query: 122 IHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLT 181
           +HD P  N    + L+          +   + D+M  H++ P     ++L + L +   +
Sbjct: 256 LHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGES 315

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
             +  ++ + ++ GV+   +  ++L++  CK   V K E++L  +    +      YNTL
Sbjct: 316 RTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTL 375

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GA 299
           I  YC+      A  + ++M+   I PD +TYN+LI+G C+   + +A  L  +++  G 
Sbjct: 376 INGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGV 435

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
            P+  T+ TLID Y  A  LE+   +   M  KG+   V+++ S+++  CK G+I +A  
Sbjct: 436 DPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVA 495

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
           +L++M  K +AP+    N++I+AY + GDT  A  +  +M  +G+     TY  L+ G C
Sbjct: 496 ILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLC 555

Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
           ++ ++D A+EL++ + + G  P   SY+ ++   CNK + +  L+LL E    G+   + 
Sbjct: 556 RSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLR 615

Query: 480 VYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWR 525
            Y  L+       +V   + L+  M    +   S IY  +  AY R
Sbjct: 616 TYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVR 661



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 106/423 (25%), Positives = 207/423 (48%), Gaps = 2/423 (0%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
            D L+VFD+M    ++P+      +++   K    +  +++  +M+  G   NI  YNVL
Sbjct: 211 SDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVL 270

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           +   C++  +D+   L+ EM    +  D FTY+ L     + G     L++     ++G+
Sbjct: 271 LSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGV 330

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
                T + L++G C++G++ +A ++   +   G  P  V Y TLI+GYC+  DL  A  
Sbjct: 331 MLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFC 390

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           + E M ++ + P  +TYN+++  LCK   +  A  L+ EM +  + P   T NTLI+AY 
Sbjct: 391 IFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYG 450

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
             G       V + M + G+  D  ++ +++  FCK  ++  A  +L  M+    +P+  
Sbjct: 451 TAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQ 510

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
            Y+ ++D Y    + E    L+++  + G+   +  Y  L++  C+  ++D A+ L   +
Sbjct: 511 VYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTL 570

Query: 505 QGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
           +  G+  D V Y ++  A    G+     ++L +M +  +  TL+ Y +  ++ A    +
Sbjct: 571 RNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRV 630

Query: 565 LDL 567
            D+
Sbjct: 631 HDM 633



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 103/337 (30%), Positives = 175/337 (51%), Gaps = 4/337 (1%)

Query: 232 RADLFTYNTLIALYCKKGMHYEALAVQDRMER-EGISP-DIVTYNSLIHGFCREGRMREA 289
           R D F +N ++      G    ALA+  RM R EG  P D  +YN +I G  R G+  +A
Sbjct: 154 RPDTFAWNKVVQACVAAGDLDVALAMVRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDA 213

Query: 290 RRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRK 347
            ++F ++   G  PN +TY T+IDG+ +  DLE   RLR+ M   G  P +VTYN +L  
Sbjct: 214 LKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSG 273

Query: 348 LCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLD 407
           LC+ GR+ +   L++EM    + PD  T + L +   + G++ + + +    L+ G+ML 
Sbjct: 274 LCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLG 333

Query: 408 QFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLD 467
            +T   L++G CK  ++  A+++L  ++  G  P+   Y+ L++GYC   +      + +
Sbjct: 334 AYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFE 393

Query: 468 EFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
           +  SR +  D   Y ALI   CK E V  A+ L   M+ +G+      + +L  AY  AG
Sbjct: 394 QMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAG 453

Query: 528 EPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
           + + C  +L DM ++ +   +  + S   ++ K+ +I
Sbjct: 454 QLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKI 490



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 110/392 (28%), Positives = 175/392 (44%), Gaps = 45/392 (11%)

Query: 126 PDGNSHVLSWLVIFYANLKMTQDG---LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTD 182
           PDG ++      I +  L  T +    L +F +     +M   + C++LLN L KD    
Sbjct: 297 PDGFTYS-----ILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVA 351

Query: 183 MVWKVYKKMVQLGVVANIHLYNVLIHACCKSSD--------------------------- 215
              +V + +V  G+V    +YN LI+  C+  D                           
Sbjct: 352 KAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALI 411

Query: 216 --------VDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
                   V K E L+ EME   V   + T+NTLI  Y   G   +   V   M+++GI 
Sbjct: 412 NGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIK 471

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
            D++++ S++  FC+ G++ EA  +  D+  K   PN   Y ++ID Y  + D E+A  L
Sbjct: 472 SDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLL 531

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
            E M   GV   +VTYN +L+ LC+  +I +A  L+  +  + + PD V+ NT+I+A C 
Sbjct: 532 VEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCN 591

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            GDT  A+++   M + G+     TY  L+     A  +   + L   ML     PS   
Sbjct: 592 KGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSI 651

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVD 477
           Y  +VD Y    N+  +  L  E   +G+  D
Sbjct: 652 YGIMVDAYVRCENDSKVASLKKEMSEKGIAFD 683



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 111/412 (26%), Positives = 189/412 (45%), Gaps = 6/412 (1%)

Query: 162 MPHLHACTVLLNSLA-KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVE 220
           +P L +C +LL SL    R  D V   +  +V  G   +   +N ++ AC  + D+D   
Sbjct: 119 LPSLSSCNLLLESLLFVGRHAD-VRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVAL 177

Query: 221 KLLCEMEFKD--VRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIH 278
            ++  M   +     D F+YN +IA   + G   +AL V D M   G+ P+ +TYN++I 
Sbjct: 178 AMVRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMID 237

Query: 279 GFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYP 336
           G  + G +    RL   +   G  PN VTY  L+ G CRA  ++E   L + MA+  ++P
Sbjct: 238 GHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFP 297

Query: 337 GVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVK 396
              TY+ +   L + G  R    L  E  +K +     TC+ L+N  CK G  A A +V 
Sbjct: 298 DGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVL 357

Query: 397 NRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNK 456
             ++  GL+     Y  LI+G+C+ +++  A  +   M      P + +Y+ L++G C  
Sbjct: 358 EMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKL 417

Query: 457 NNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIY 516
                   L+ E    G+   V  +  LI  +    +++    + + MQ  GI  D + +
Sbjct: 418 EMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISF 477

Query: 517 TSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLF 568
            S+  A+ + G+      ILDDM  + +    ++Y S   +Y +  +    F
Sbjct: 478 GSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAF 529


>gi|32489931|emb|CAE05523.1| OSJNBa0038P21.16 [Oryza sativa Japonica Group]
 gi|38347491|emb|CAE05839.2| OSJNBa0091C07.1 [Oryza sativa Japonica Group]
          Length = 844

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 117/451 (25%), Positives = 207/451 (45%), Gaps = 40/451 (8%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           +F +M    ++P +  C  ++  L K +  D    + +KMV  G+  ++  Y+++I   C
Sbjct: 232 LFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLC 291

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           KS  +DK E++L +M     R +  TYN+LI  Y   GM  E++ V  +M   G+ P + 
Sbjct: 292 KSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVD 351

Query: 272 TYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRAND--LEEALRLRE 327
             NS IH   + GR  EA+ +F    +KG  P+ ++Y+T++ GY  A D  L +   +  
Sbjct: 352 NCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFN 411

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
           +M  KG+ P    +N ++    + G +  A  +  +M  K + PD VT  T+I++ C+IG
Sbjct: 412 LMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIG 471

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD----------- 436
               A+   N M++ G+   +  Y  LI G C   E+  AKEL+  M++           
Sbjct: 472 RLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYF 531

Query: 437 -------------------------AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
                                     G  P+  +++ L++GYC   N E    LLD   S
Sbjct: 532 SSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMAS 591

Query: 472 RGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKA 531
            G+  +  +Y  L+  +CK  ++D A  +F  M   G+   SV+Y+ + +  ++A    A
Sbjct: 592 IGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTA 651

Query: 532 CSDILDDMYRRRLMITLKIYRSFSASYAKDN 562
              +  +M      +++  Y        ++N
Sbjct: 652 AKKMFHEMIESGTTVSIHTYGVVLGGLCRNN 682



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 113/434 (26%), Positives = 193/434 (44%), Gaps = 16/434 (3%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAK-DRLTDMVWKV 187
           N HV + L+  YA   M    + +F+ M+   ++P       +++SL +  RL D + K 
Sbjct: 421 NKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHK- 479

Query: 188 YKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTY-NTLIALYC 246
           +  MV +GV  +  +Y  LI  CC   ++ K ++L+ EM  KD+      Y +++I   C
Sbjct: 480 FNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLC 539

Query: 247 KKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHV 304
           K+G   E   + D M + G  P++VT+NSL+ G+C  G M EA  L   +   G  PN  
Sbjct: 540 KEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCY 599

Query: 305 TYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM 364
            Y TL+DGYC+   +++AL +   M  KGV P  V Y+ IL  L +  R   A ++ +EM
Sbjct: 600 IYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEM 659

Query: 365 NEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEM 424
            E        T   ++   C+   T  A  +  ++    +  D  T+  +I    K    
Sbjct: 660 IESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRR 719

Query: 425 DIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRAL 484
             AKEL   +   G  P+  +YS ++     + + E    L       G   D  +   +
Sbjct: 720 QEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHI 779

Query: 485 IRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL 544
           +R    K +V  A    +++  N +  ++   + LA  + R G+           YR  +
Sbjct: 780 VRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGK-----------YREHI 828

Query: 545 MITLKIYRSFSASY 558
            +    Y+ F  ++
Sbjct: 829 KLLPAKYQFFEGAW 842



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 78/297 (26%), Positives = 148/297 (49%), Gaps = 5/297 (1%)

Query: 235 LFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR 294
           + TYN LI  Y +       LA+  R+ + G+ PD  +Y SLI+GF ++G + +A  LF 
Sbjct: 176 IHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDKAHCLFL 234

Query: 295 DI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEG 352
           ++  +G  P  +   ++I   C+  ++++A  + + M   G+ P + TY+ I+  LCK  
Sbjct: 235 EMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSK 294

Query: 353 RIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYK 412
            +  A R+L +M E    P+++T N+LI+ Y   G    +++V  +M   G++       
Sbjct: 295 AMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCN 354

Query: 413 ALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNE--EALLKLLDEFV 470
           + IH   K    + AK +   M+  G  P   SYS ++ GY    +     +  + +  +
Sbjct: 355 SFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLML 414

Query: 471 SRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
           ++G+  +  V+  LI  + +   +D A  +F  MQ  G++ D+V + ++  +  R G
Sbjct: 415 TKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIG 471



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 76/291 (26%), Positives = 142/291 (48%), Gaps = 15/291 (5%)

Query: 299 ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDAN 358
           + P   TY  LID Y R +  +  L +   +   G+ P   +Y S++    K+G +  A+
Sbjct: 172 SPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDKAH 230

Query: 359 RLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGF 418
            L  EM E+ + P  + CN++I   CK+ +   A  +  +M+++G+  D FTY  +I G 
Sbjct: 231 CLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGL 290

Query: 419 CKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDV 478
           CK+K MD A+ +L  M++AG  P+  +Y+ L+ GY         +++  +  S G+   V
Sbjct: 291 CKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTV 350

Query: 479 SVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDD 538
               + I    K  + + A+ +F+ M   G   D + Y+++ + Y  A +  +C   + +
Sbjct: 351 DNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATD--SCLADVHN 408

Query: 539 MYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKH--IFKEMQ 587
           ++   LM+T  I        A +  + ++  +     G+M K   IF++MQ
Sbjct: 409 IF--NLMLTKGI--------APNKHVFNILINAYARCGMMDKAMLIFEDMQ 449


>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
 gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
          Length = 813

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 111/403 (27%), Positives = 193/403 (47%), Gaps = 37/403 (9%)

Query: 162 MPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEK 221
           +P+  A   +++   K+   +    ++ +MVQ G+  ++  YN +++A CK+  +DK E 
Sbjct: 213 LPNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEA 272

Query: 222 LLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFC 281
           +L +M  K V  D +TYN+LI  Y   G   EA+ V  +M  +GI PD+VT NSL+   C
Sbjct: 273 ILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLC 332

Query: 282 REGRMREARRLFRDIK-------------------------------------GATPNHV 304
           + G++++AR +F  +                                      G  P+  
Sbjct: 333 KHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSH 392

Query: 305 TYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM 364
            +  LI  Y +   L+ A  +   M  +GV P VVTY++++  LC+ G++ DA    N+M
Sbjct: 393 IFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQM 452

Query: 365 NEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEM 424
            ++ +AP   T + LI  +C  GD   A  +  +M+  G+  D   +  +I+  CK   +
Sbjct: 453 IDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRV 512

Query: 425 DIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRAL 484
             A+ +    +  G  P+   Y+ L+DGYC     E  L++ D  VS G+  +V VY  L
Sbjct: 513 MDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTL 572

Query: 485 IRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
           +  +CK  ++D    LF  +   GI   + +Y  + +  ++AG
Sbjct: 573 VNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAG 615



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 124/433 (28%), Positives = 206/433 (47%), Gaps = 8/433 (1%)

Query: 144 KMTQDGLQVFDQMRVH-NLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVV--ANI 200
           K T + L +      H   +P + +  ++L SL  DR +    ++ + M + G V   N 
Sbjct: 157 KRTAEALDILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNA 216

Query: 201 HLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDR 260
             YN +I    K  DV+K   L  EM  + +  DL TYN ++   CK     +A A+  +
Sbjct: 217 VAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQ 276

Query: 261 MEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRAND 318
           M  +G+ PD  TYNSLI+G+   G+ +EA R+ + +  +G  P+ VT  +L+   C+   
Sbjct: 277 MVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGK 336

Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT 378
           +++A  + + MA KG    + +Y  +L     +G + D   L N M    IAPD+   N 
Sbjct: 337 IKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNV 396

Query: 379 LINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAG 438
           LI AY K G    A  + N M E G+  D  TY  +I   C+  +MD A E    M+D G
Sbjct: 397 LIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQG 456

Query: 439 FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQ 498
            +PS  +Y +L+ G+C   +      L+ + +++G+  D+  +  +I   CK  +V  AQ
Sbjct: 457 VAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQ 516

Query: 499 RLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASY 558
            +F+     G+  + ++Y +L   Y   G+ +    + D M    +   + +Y +    Y
Sbjct: 517 NIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGY 576

Query: 559 AKDNEI---LDLF 568
            K   I   L LF
Sbjct: 577 CKVGRIDEGLSLF 589



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 117/466 (25%), Positives = 223/466 (47%), Gaps = 36/466 (7%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLA-KDRLTDMVWKVYKKMVQLGVVANIHLYNV 205
           +D   VFD M +      + +  ++LN  A K  L D+  +++  M+  G+  + H++NV
Sbjct: 338 KDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLT-ELFNLMLSDGIAPDSHIFNV 396

Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
           LI A  K   +D+   +  EM  + V  D+ TY+T+IA  C+ G   +A+   ++M  +G
Sbjct: 397 LIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQG 456

Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEAL 323
           ++P I TY+ LI GFC  G + +A+ L   +  KG  P+   +  +I+  C+   + +A 
Sbjct: 457 VAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQ 516

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
            + +   + G++P V+ YN+++   C  G++ +A R+ + M    I P+ V   TL+N Y
Sbjct: 517 NIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGY 576

Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY 443
           CK+G     + +   +L  G+      Y  ++HG  +A     AK     M ++G +   
Sbjct: 577 CKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDR 636

Query: 444 CSYSWLVDG-YCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
            +YS ++ G + N  ++EA+L L  E  +  + +D++    +I    +  +V+ A+ LF 
Sbjct: 637 YTYSIVLGGLFKNSCSDEAIL-LFKELHAMNVKIDITTLNIMIAGMFQIRRVEEAKDLFA 695

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAG------------EPKACSD--------ILDDMYRR 542
            +  +G++   V Y+ +     + G            E   C          ++ ++  +
Sbjct: 696 SISRSGLVPSVVTYSIMMTNLIKEGLVEEADDMFSSMENAGCEQPNSQLLNHVVRELLEK 755

Query: 543 RLMITLKIY------RSFSASYAKDNEILDLFWSHVVDRGLMSKHI 582
           R ++    Y      RSFS  ++    ++DLF S    +G   +HI
Sbjct: 756 REIVRAGTYLSKIDERSFSLDHSTTTLLIDLFSS----KGTCREHI 797



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 108/440 (24%), Positives = 192/440 (43%), Gaps = 5/440 (1%)

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           L+  Y++    ++ ++V  +M    ++P +     L+ SL K         V+  M   G
Sbjct: 292 LIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKG 351

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
              +I  Y ++++       +  + +L   M    +  D   +N LI  Y K GM   A 
Sbjct: 352 QKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRAT 411

Query: 256 AVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGY 313
            + + M  +G+ PD+VTY+++I   CR G+M +A   F  +  +G  P+  TY  LI G+
Sbjct: 412 IIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGF 471

Query: 314 CRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDN 373
           C   DL +A  L   M  KG+ P +  +N I+  LCK GR+ DA  + +      + P+ 
Sbjct: 472 CTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNV 531

Query: 374 VTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFG 433
           +  NTL++ YC +G   +A++V + M+ AG+  +   Y  L++G+CK   +D    L   
Sbjct: 532 MVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFRE 591

Query: 434 MLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEK 493
           +L  G  PS   Y+ ++ G               E    G+ +D   Y  ++    K   
Sbjct: 592 ILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSC 651

Query: 494 VDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRS 553
            D A  LF  +    +  D      +    ++    +   D+   + R  L+ ++  Y  
Sbjct: 652 SDEAILLFKELHAMNVKIDITTLNIMIAGMFQIRRVEEAKDLFASISRSGLVPSVVTYSI 711

Query: 554 FSASYAKDN---EILDLFWS 570
              +  K+    E  D+F S
Sbjct: 712 MMTNLIKEGLVEEADDMFSS 731



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 101/383 (26%), Positives = 180/383 (46%), Gaps = 20/383 (5%)

Query: 88  LTKNKHFKSAQNMLEKIALR----DFLSTPSVLNALVK--------------IHDDPDGN 129
           L K+   K A+++ + +A++    D  S   +LN                  + D    +
Sbjct: 331 LCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPD 390

Query: 130 SHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYK 189
           SH+ + L+  YA   M      +F++MR   + P +   + ++ +L +    D   + + 
Sbjct: 391 SHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFN 450

Query: 190 KMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKG 249
           +M+  GV  +I  Y+ LI   C   D+ K + L+ +M  K +R D+  +N +I   CK G
Sbjct: 451 QMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLG 510

Query: 250 MHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYT 307
              +A  + D     G+ P+++ YN+L+ G+C  G+M  A R+F  +   G  PN V Y 
Sbjct: 511 RVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYG 570

Query: 308 TLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEK 367
           TL++GYC+   ++E L L   +  KG+ P    YN IL  L + GR   A    +EM E 
Sbjct: 571 TLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTES 630

Query: 368 KIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIA 427
            IA D  T + ++    K   +  A+ +   +    + +D  T   +I G  + + ++ A
Sbjct: 631 GIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMNVKIDITTLNIMIAGMFQIRRVEEA 690

Query: 428 KELLFGMLDAGFSPSYCSYSWLV 450
           K+L   +  +G  PS  +YS ++
Sbjct: 691 KDLFASISRSGLVPSVVTYSIMM 713



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 95/372 (25%), Positives = 171/372 (45%), Gaps = 5/372 (1%)

Query: 199 NIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQ 258
            +H Y +L+  C ++           ++    +  D    + L+   C+     EAL + 
Sbjct: 107 TLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGLGIDTIMISNLLRGLCEAKRTAEALDIL 166

Query: 259 -DRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GAT--PNHVTYTTLIDGY 313
             RM   G  PD+ +Y  ++   C + +  +A  L R +   GA   PN V Y T+IDG+
Sbjct: 167 LHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNTVIDGF 226

Query: 314 CRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDN 373
            +  D+ +A  L   M  +G+ P + TYN ++  LCK   +  A  +L +M +K + PDN
Sbjct: 227 FKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDN 286

Query: 374 VTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFG 433
            T N+LI  Y   G    A++V  +M   G++ D  T  +L+   CK  ++  A+++   
Sbjct: 287 WTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDS 346

Query: 434 MLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEK 493
           M   G      SY  +++GY  K     L +L +  +S G+  D  ++  LI+ + K   
Sbjct: 347 MAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGM 406

Query: 494 VDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRS 553
           +D A  +FN M+  G+  D V Y+++  A  R G+     +  + M  + +  ++  Y  
Sbjct: 407 LDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHF 466

Query: 554 FSASYAKDNEIL 565
               +    ++L
Sbjct: 467 LIQGFCTHGDLL 478



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 77/315 (24%), Positives = 135/315 (42%), Gaps = 13/315 (4%)

Query: 281 CREGRMREARRLFRDIKGA------TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGV 334
           CR+G    A  LF  +  A      +P   TY  L+D   RA+  +  L     +   G+
Sbjct: 81  CRDGPAL-AVALFNRVSRAHGPRVLSPTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGL 139

Query: 335 YPGVVTYNSILRKLCKEGRIRDA-NRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAM 393
               +  +++LR LC+  R  +A + LL+ M      PD  +   ++ + C    +  A 
Sbjct: 140 GIDTIMISNLLRGLCEAKRTAEALDILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQAD 199

Query: 394 KVKNRMLEAGL--MLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVD 451
           ++   M E G   + +   Y  +I GF K  +++ A +L   M+  G SP   +Y+ +V+
Sbjct: 200 ELLRMMAEGGAVCLPNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVN 259

Query: 452 GYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILG 511
             C     +    +L + V +G+  D   Y +LI  +    +   A R+   M   GIL 
Sbjct: 260 ALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILP 319

Query: 512 DSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDL--FW 569
           D V   SL  +  + G+ K   D+ D M  +     +  Y+     YA    ++DL   +
Sbjct: 320 DVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELF 379

Query: 570 SHVVDRGLMS-KHIF 583
           + ++  G+    HIF
Sbjct: 380 NLMLSDGIAPDSHIF 394


>gi|224160015|ref|XP_002338159.1| predicted protein [Populus trichocarpa]
 gi|222871069|gb|EEF08200.1| predicted protein [Populus trichocarpa]
          Length = 368

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 108/321 (33%), Positives = 166/321 (51%), Gaps = 2/321 (0%)

Query: 156 MRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSD 215
           M      P +H  T ++N L K   T     ++KKM + G   ++  Y+ +I + CK   
Sbjct: 1   MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRR 60

Query: 216 VDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNS 275
           V++   +   M+ K +  ++FTYN+LI   C      EA A+ + M    I P+IVT++ 
Sbjct: 61  VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSL 120

Query: 276 LIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKG 333
           LI+ FC+EG + EAR + + +   G  PN VTY++L++GY    ++ EA +L +VM  KG
Sbjct: 121 LINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKG 180

Query: 334 VYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAM 393
             P V +YN ++   CK  RI +A +L NEM  + + PD V+ NTLI+  C++G    A 
Sbjct: 181 CKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAH 240

Query: 394 KVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGY 453
            +   ML  G + D  TY  L+ GFCK   +  A  L   M      P+   Y+ L+D  
Sbjct: 241 DLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAM 300

Query: 454 CNKNNEEALLKLLDEFVSRGL 474
           C   N +   KL  E   +GL
Sbjct: 301 CKSRNLKEARKLFSELFVQGL 321



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 100/328 (30%), Positives = 165/328 (50%), Gaps = 2/328 (0%)

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
           +  + D+ TY T+I   CK G    A  +  +M   G  PD+VTY+++I   C++ R+ E
Sbjct: 4   RGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNE 63

Query: 289 ARRLFR--DIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILR 346
           A  +F     KG +PN  TY +LI G C  +   EA  +   M +  + P +VT++ ++ 
Sbjct: 64  ALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLIN 123

Query: 347 KLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLML 406
             CKEG + +A  +L  M E  + P+ VT ++L+N Y    +   A K+ + M+  G   
Sbjct: 124 IFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKP 183

Query: 407 DQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLL 466
           D F+Y  LI+G+CKAK +  AK+L   M+  G +P   SY+ L+DG C          L 
Sbjct: 184 DVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLF 243

Query: 467 DEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRA 526
              ++ G   D+  Y  L+  FCK+  +  A RLF  MQ   +  + V+Y  L  A  ++
Sbjct: 244 KNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKS 303

Query: 527 GEPKACSDILDDMYRRRLMITLKIYRSF 554
              K    +  +++ + L   +K ++ F
Sbjct: 304 RNLKEARKLFSELFVQGLQPNMKHWKLF 331



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 99/307 (32%), Positives = 156/307 (50%), Gaps = 17/307 (5%)

Query: 261 MEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRAND 318
           M   G  PD+ TY ++I+G C+ G    A  LF+ +   G  P+ VTY+T+ID  C+   
Sbjct: 1   MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRR 60

Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT 378
           + EAL +   M AKG+ P + TYNS+++ LC   R R+A+ +LNEM    I P+ VT + 
Sbjct: 61  VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSL 120

Query: 379 LINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAG 438
           LIN +CK G+   A  V   M E G+  +  TY +L++G+    E+  A++L   M+  G
Sbjct: 121 LINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKG 180

Query: 439 FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQ 498
             P   SY+ L++GYC         +L +E + +GL  D+  Y  LI   C+  ++  A 
Sbjct: 181 CKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAH 240

Query: 499 RLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASY 558
            LF  M  NG L D   Y+ L   + + G                L    +++R+  ++Y
Sbjct: 241 DLFKNMLTNGNLPDLCTYSILLDGFCKQG---------------YLAKAFRLFRAMQSTY 285

Query: 559 AKDNEIL 565
            K N ++
Sbjct: 286 LKPNMVM 292



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 91/293 (31%), Positives = 156/293 (53%), Gaps = 2/293 (0%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           +F +M      P +   + +++SL KDR  +    ++  M   G+  NI  YN LI   C
Sbjct: 32  LFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLC 91

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
             S   +   +L EM   ++  ++ T++ LI ++CK+G  +EA  V   M   G+ P++V
Sbjct: 92  NFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVV 151

Query: 272 TYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           TY+SL++G+  +  + EAR+LF  +  KG  P+  +Y  LI+GYC+A  + EA +L   M
Sbjct: 152 TYSSLMNGYSLQAEVFEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEM 211

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
             +G+ P +V+YN+++  LC+ GR+R+A+ L   M      PD  T + L++ +CK G  
Sbjct: 212 IHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYL 271

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           A A ++   M    L  +   Y  LI   CK++ +  A++L   +   G  P+
Sbjct: 272 AKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPN 324



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/245 (26%), Positives = 111/245 (45%), Gaps = 14/245 (5%)

Query: 61  CAFFKWAE-SAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNAL 119
           C F +W E SA+ N   SL     M +I+T    F    N+  K    +      VL  +
Sbjct: 91  CNFSRWREASAMLNEMMSLN---IMPNIVT----FSLLINIFCKEG--NVFEARGVLKTM 141

Query: 120 VKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDR 179
            ++  +P  N    S L+  Y+      +  ++FD M      P + +  +L+N   K +
Sbjct: 142 TEMGVEP--NVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPDVFSYNILINGYCKAK 199

Query: 180 LTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYN 239
                 +++ +M+  G+  +I  YN LI   C+   + +   L   M       DL TY+
Sbjct: 200 RIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYS 259

Query: 240 TLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IK 297
            L+  +CK+G   +A  +   M+   + P++V YN LI   C+   ++EAR+LF +  ++
Sbjct: 260 ILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQ 319

Query: 298 GATPN 302
           G  PN
Sbjct: 320 GLQPN 324



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/168 (23%), Positives = 68/168 (40%)

Query: 399 MLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNN 458
           M+  G   D  TY  +I+G CK  E   A  L   M +AG  P   +YS ++D  C    
Sbjct: 1   MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRR 60

Query: 459 EEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTS 518
               L +     ++G+  ++  Y +LI+  C   +   A  + N M    I+ + V ++ 
Sbjct: 61  VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSL 120

Query: 519 LAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
           L   + + G       +L  M    +   +  Y S    Y+   E+ +
Sbjct: 121 LINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFE 168



 Score = 45.1 bits (105), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 33/145 (22%), Positives = 67/145 (46%), Gaps = 2/145 (1%)

Query: 126 PDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVW 185
           PD  S+  + L+  Y   K   +  Q+F++M    L P + +   L++ L +        
Sbjct: 183 PDVFSY--NILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAH 240

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
            ++K M+  G + ++  Y++L+   CK   + K  +L   M+   ++ ++  YN LI   
Sbjct: 241 DLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAM 300

Query: 246 CKKGMHYEALAVQDRMEREGISPDI 270
           CK     EA  +   +  +G+ P++
Sbjct: 301 CKSRNLKEARKLFSELFVQGLQPNM 325


>gi|358344944|ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355502480|gb|AES83683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 113/387 (29%), Positives = 199/387 (51%), Gaps = 4/387 (1%)

Query: 164 HLHACT--VLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEK 221
           HL+  T  +L+N L K   T    +V +++    V  N+ +Y+ +I   CK   V     
Sbjct: 155 HLNHVTYGILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTDAYG 214

Query: 222 LLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFC 281
           L  EM  K +   + T+++LI  +C  G   +A  + + M  + I+PD  T+N L+   C
Sbjct: 215 LYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALC 274

Query: 282 REGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVV 339
           +EG+++EA+ +   +  +G  P  VTY TL+DGYC  N++ +A  +  +++   V P   
Sbjct: 275 KEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSR 334

Query: 340 TYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRM 399
           +YN ++   CK   + +A  L +EM  + IAP  VT N+LI+  CK G    A ++ + M
Sbjct: 335 SYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEM 394

Query: 400 LEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNE 459
               +  D  TY +LI  FCK + +D A  L+  + + G  P+ C+Y+ L+DG C     
Sbjct: 395 HNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQL 454

Query: 460 EALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
           +    +  + + +G  V+   Y  +I   CK+   D A+ L + M+ NGI+ D+V Y ++
Sbjct: 455 KNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETI 514

Query: 520 AYAYWRAGEPKACSDILDDMYRRRLMI 546
             A +   E +    +L +M  + +++
Sbjct: 515 IQALFHKDENEKAQKLLREMVIKGVVV 541



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 106/370 (28%), Positives = 192/370 (51%), Gaps = 2/370 (0%)

Query: 143 LKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHL 202
           +  T+  LQV  Q+    +  ++   + +++ L KD+L    + +Y +M+   +   +  
Sbjct: 171 MGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVT 230

Query: 203 YNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRME 262
           ++ LI+  C         +L  EM  K++  D +T+N L+   CK+G   EA  V   M 
Sbjct: 231 FSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKNVIAVMM 290

Query: 263 REGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLE 320
           +EG+ P +VTYN+L+ G+C    + +A+ +   I      PN  +Y  +I+G+C+   ++
Sbjct: 291 KEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFCKIKMVD 350

Query: 321 EALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLI 380
           EAL L   M  +G+ P  VTYNS++  LCK GRI  A  L++EM+   I  D VT N+LI
Sbjct: 351 EALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLI 410

Query: 381 NAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFS 440
           + +CK      A+ +  ++ E G+  +  TY  LI G CK  ++  A+++   +L  G++
Sbjct: 411 DVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYN 470

Query: 441 PSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRL 500
            +  +Y+ +++G C +   +    LL +    G+  D   Y  +I+    K++ + AQ+L
Sbjct: 471 VNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQALFHKDENEKAQKL 530

Query: 501 FNLMQGNGIL 510
              M   G++
Sbjct: 531 LREMVIKGVV 540



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 114/356 (32%), Positives = 169/356 (47%), Gaps = 24/356 (6%)

Query: 188 YKKMVQLGVVANIHLYNVLIHACCKSSD-VDKVEKLLCEMEFKDVRADLFTYNTLIALYC 246
           + +M Q+    +I  +N ++    K+ +    V  L  +ME K V+ DLFT + LI  YC
Sbjct: 54  FNRMRQIRQTPSIVEFNKILTYLIKTKNHYPTVLSLSTQMESKGVKPDLFTLSILINCYC 113

Query: 247 KKGMHY---------------------EALAVQDRMEREGISPDIVTYNSLIHGFCREGR 285
             G                        EAL   D +   G   + VTY  LI+G C+ G+
Sbjct: 114 HLGQMTFAFSVFAKILKMGLCLNGKVNEALLFHDHVLALGFHLNHVTYGILINGLCKMGQ 173

Query: 286 MREARRLFRDIKG--ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNS 343
            R A ++ R I+G     N V Y+T+IDG C+   + +A  L   M  K + P VVT++S
Sbjct: 174 TRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSS 233

Query: 344 ILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAG 403
           ++   C  G+ +DA RL NEM  K I PD  T N L++A CK G    A  V   M++ G
Sbjct: 234 LIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEG 293

Query: 404 LMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALL 463
           +     TY  L+ G+C   E+  AK +L  +     +P+  SY+ +++G+C     +  L
Sbjct: 294 VEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEAL 353

Query: 464 KLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
            L  E   RG+      Y +LI   CK  ++ YA  L + M  N I  D V Y SL
Sbjct: 354 CLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSL 409



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 107/392 (27%), Positives = 188/392 (47%), Gaps = 16/392 (4%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           L +  QM    + P L   ++L+N           + V+ K++++G+  N  +   L+  
Sbjct: 87  LSLSTQMESKGVKPDLFTLSILINCYCHLGQMTFAFSVFAKILKMGLCLNGKVNEALLFH 146

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
                  D V  L           +  TY  LI   CK G    AL V  ++E + ++ +
Sbjct: 147 -------DHVLAL-------GFHLNHVTYGILINGLCKMGQTRAALQVLRQIEGKLVNTN 192

Query: 270 IVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEALRLRE 327
           +V Y+++I G C++  + +A  L+ +  +K   P  VT+++LI G+C     ++A RL  
Sbjct: 193 VVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFN 252

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
            M  K + P   T+N ++  LCKEG+I++A  ++  M ++ + P  VT NTL++ YC + 
Sbjct: 253 EMVMKNINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVN 312

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
           +   A  V + +    +  +  +Y  +I+GFCK K +D A  L   M   G +P   +Y+
Sbjct: 313 EVGKAKHVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYN 372

Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGN 507
            L+DG C         +L+DE  +  +  D+  Y +LI  FCK + VD A  L   ++ +
Sbjct: 373 SLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEH 432

Query: 508 GILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
           GI  +   Y  L     + G+ K   D+  D+
Sbjct: 433 GIQPNMCTYNILIDGLCKGGQLKNAQDVFQDL 464



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 102/357 (28%), Positives = 167/357 (46%), Gaps = 26/357 (7%)

Query: 233 ADLFTYNTLIALYCKKGMHYEA-LAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARR 291
             +  +N ++    K   HY   L++  +ME +G+ PD+ T + LI+ +C  G+M  A  
Sbjct: 64  PSIVEFNKILTYLIKTKNHYPTVLSLSTQMESKGVKPDLFTLSILINCYCHLGQMTFAFS 123

Query: 292 LFRDI-----------------------KGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
           +F  I                        G   NHVTY  LI+G C+      AL++   
Sbjct: 124 VFAKILKMGLCLNGKVNEALLFHDHVLALGFHLNHVTYGILINGLCKMGQTRAALQVLRQ 183

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           +  K V   VV Y++I+  LCK+  + DA  L +EM  K+I P  VT ++LI  +C +G 
Sbjct: 184 IEGKLVNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGK 243

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
              A ++ N M+   +  D +T+  L+   CK  ++  AK ++  M+  G  P+  +Y+ 
Sbjct: 244 FKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNT 303

Query: 449 LVDGYCNKNNEEALLKLLDEFVSR-GLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGN 507
           L+DGYC   NE    K +   +SR  +  +   Y  +I  FCK + VD A  LF+ M   
Sbjct: 304 LMDGYC-LVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCR 362

Query: 508 GILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
           GI    V Y SL     +AG      +++D+M+   +   +  Y S    + K+  +
Sbjct: 363 GIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHV 419



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 95/327 (29%), Positives = 145/327 (44%), Gaps = 38/327 (11%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGV---------- 196
           +D  ++F++M + N+ P  +   +L+++L K+        V   M++ GV          
Sbjct: 245 KDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTL 304

Query: 197 -------------------------VANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDV 231
                                      N   YN++I+  CK   VD+   L  EM  + +
Sbjct: 305 MDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGI 364

Query: 232 RADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARR 291
                TYN+LI   CK G    A  + D M    I  DIVTYNSLI  FC+   + +A  
Sbjct: 365 APHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIA 424

Query: 292 LFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLC 349
           L + IK  G  PN  TY  LIDG C+   L+ A  + + +  KG      TYN ++  LC
Sbjct: 425 LVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLC 484

Query: 350 KEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQF 409
           KEG   +A  LL++M +  I PD VT  T+I A     +   A K+   M+  G+++  F
Sbjct: 485 KEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQALFHKDENEKAQKLLREMVIKGVVVYAF 544

Query: 410 TYKALIHGFCKAKEMDIAKELLFGMLD 436
             +  + G      M++   LLF  L+
Sbjct: 545 EIRRTLVGRTLNLGMNLI-SLLFSALE 570



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 78/305 (25%), Positives = 132/305 (43%), Gaps = 20/305 (6%)

Query: 50  LYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDF 109
           +Y  C +     AF  + E  + N      +   ++  L K    K A+N++  +     
Sbjct: 235 IYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGV 294

Query: 110 LSTPSVLNALVKIH---DDPDGNSHVLSW---------------LVIFYANLKMTQDGLQ 151
             T    N L+  +   ++     HVLS                ++  +  +KM  + L 
Sbjct: 295 EPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEALC 354

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           +F +M    + PH      L++ L K       W++  +M    + A+I  YN LI   C
Sbjct: 355 LFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFC 414

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           K+  VDK   L+ +++   ++ ++ TYN LI   CK G    A  V   +  +G + +  
Sbjct: 415 KNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAW 474

Query: 272 TYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           TYN +I+G C+EG   EA  L   ++  G  P+ VTY T+I      ++ E+A +L   M
Sbjct: 475 TYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQALFHKDENEKAQKLLREM 534

Query: 330 AAKGV 334
             KGV
Sbjct: 535 VIKGV 539


>gi|449462479|ref|XP_004148968.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 580

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 127/454 (27%), Positives = 201/454 (44%), Gaps = 24/454 (5%)

Query: 130 SHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYK 189
           +H+LS L    A +K       +++QMR+  L        +LLN L         +  + 
Sbjct: 73  NHLLSGL----AKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFA 128

Query: 190 KMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKG 249
            +++ G   NI  YN LI   C    + +  +L   M+      D+ TY TLI   C  G
Sbjct: 129 GILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTG 188

Query: 250 -------MHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK----- 297
                  +H E L    R E     P+++TYN ++ G C+ GR  EA++LF ++K     
Sbjct: 189 NINIALKLHQEMLNDISRYEIN-CKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMI 247

Query: 298 -------GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
                  G  P+ VT+  LID  C+   + EA +L  VM   G+ P +VTYNS++   C 
Sbjct: 248 PNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCM 307

Query: 351 EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
            G +  A  L   M  K   PD ++ N LIN Y K      AMK+ N ML  G   +  T
Sbjct: 308 VGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVIT 367

Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFV 470
           Y +L+ G   A ++D AK+L   M   G + +  +Y   +DG C  +     +KL  E  
Sbjct: 368 YDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELK 427

Query: 471 SRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPK 530
           S    +++     LI   CK  K++ A  LF  +   G   + V YT + + + R G+  
Sbjct: 428 SSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVD 487

Query: 531 ACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
             + ++  M        +  Y +    + + N++
Sbjct: 488 KANVLIQKMEANGCTPDIITYNTLMRGFYESNKL 521



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 124/386 (32%), Positives = 186/386 (48%), Gaps = 53/386 (13%)

Query: 149 GLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIH 208
            L  F  M      P L +   LL+ LAK +    V+ +Y +M   G+ ++    N+L++
Sbjct: 53  ALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLN 112

Query: 209 ACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISP 268
             C   +V+++                                 E  A    + R G SP
Sbjct: 113 CLC---NVNRLR--------------------------------EGFAAFAGILRRGYSP 137

Query: 269 DIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLR 326
           +IVTYN+LI G C E R+ EA RLF  ++  G TP+ VTY TLI G C   ++  AL+L 
Sbjct: 138 NIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLH 197

Query: 327 EVMAAK------GVYPGVVTYNSILRKLCKEGRIRDANRLL----------NEMNEKKIA 370
           + M            P V+TYN I+  LCK GR  +A +L           NEM ++ + 
Sbjct: 198 QEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQ 257

Query: 371 PDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL 430
           PD VT N LI+  CK G    A K+   M+E+G++ D  TY +LI GFC   +++ A+EL
Sbjct: 258 PDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSAREL 317

Query: 431 LFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCK 490
              M   G  P   SY+ L++GY      E  +KL +E +  G   +V  Y +L++    
Sbjct: 318 FVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFL 377

Query: 491 KEKVDYAQRLFNLMQGNGILGDSVIY 516
             KVD A++LF++M+ +GI  +S  Y
Sbjct: 378 AGKVDDAKKLFSVMKAHGIAENSYTY 403



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 105/385 (27%), Positives = 190/385 (49%), Gaps = 18/385 (4%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMV------QLGVVANIH 201
           +  ++F +M+     P +     L+  L      ++  K++++M+      ++    N+ 
Sbjct: 157 EATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVI 216

Query: 202 LYNVLIHACCKSSDVDKVEKLLCEMEFKD----------VRADLFTYNTLIALYCKKGMH 251
            YN+++   CK    D+ ++L  EM+ +           ++ D+ T+N LI   CK+G  
Sbjct: 217 TYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKV 276

Query: 252 YEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTL 309
            EA  +   M   GI PD+VTYNSLI GFC  G +  AR LF  +  KG  P+ ++Y  L
Sbjct: 277 IEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVL 336

Query: 310 IDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI 369
           I+GY +   +EEA++L   M   G  P V+TY+S+L+ +   G++ DA +L + M    I
Sbjct: 337 INGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGI 396

Query: 370 APDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKE 429
           A ++ T    ++  CK      AMK+   +  +   L+      LI G CKA +++ A E
Sbjct: 397 AENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWE 456

Query: 430 LLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFC 489
           L   + + G  P+  +Y+ ++ G+C +   +    L+ +  + G   D+  Y  L+R F 
Sbjct: 457 LFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFY 516

Query: 490 KKEKVDYAQRLFNLMQGNGILGDSV 514
           +  K++   +L + M    +  D++
Sbjct: 517 ESNKLEEVVQLLHRMAQKDVSPDAI 541



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 132/543 (24%), Positives = 236/543 (43%), Gaps = 43/543 (7%)

Query: 63  FFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKI 122
           FF     + P    SL S   ++  L K KH+    ++  ++ L    S    LN L+  
Sbjct: 56  FFHLMMRSTPT--PSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNC 113

Query: 123 HDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTD 182
                              N+   ++G   F  +      P++     L+  L  +    
Sbjct: 114 -----------------LCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRIS 156

Query: 183 MVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDV-------RADL 235
              +++ +M +LG   ++  Y  LI   C + +++   KL  EM   D+       + ++
Sbjct: 157 EATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEM-LNDISRYEINCKPNV 215

Query: 236 FTYNTLIALYCKKGMHYEALAVQDRMEREG----------ISPDIVTYNSLIHGFCREGR 285
            TYN ++   CK G   EA  + + M+ +G          + PD+VT+N LI   C+EG+
Sbjct: 216 ITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGK 275

Query: 286 MREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNS 343
           + EA++L   +   G  P+ VTY +LI+G+C   DL  A  L   M +KG  P V++YN 
Sbjct: 276 VIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNV 335

Query: 344 ILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAG 403
           ++    K  ++ +A +L NEM      P+ +T ++L+      G    A K+ + M   G
Sbjct: 336 LINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHG 395

Query: 404 LMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALL 463
           +  + +TY   + G CK   +  A +L   +  + F     + + L+DG C     E   
Sbjct: 396 IAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAW 455

Query: 464 KLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAY 523
           +L ++  + G   +V  Y  +I  FC++ +VD A  L   M+ NG   D + Y +L   +
Sbjct: 456 ELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGF 515

Query: 524 WRAGEPKACSDILDDMYRRRL---MITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSK 580
           + + + +    +L  M ++ +    IT  I     +   K  E L L     + +G+  K
Sbjct: 516 YESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHLLPRFPIQKGV-DK 574

Query: 581 HIF 583
           H+ 
Sbjct: 575 HLL 577



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/301 (21%), Positives = 103/301 (34%), Gaps = 53/301 (17%)

Query: 313 YCRANDLE--EALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIA 370
           +C+  ++    AL    +M      P + ++N +L  L K         L N+M    ++
Sbjct: 42  HCKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLS 101

Query: 371 PDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL 430
            D  T N L+N  C +            +L  G   +  TY  LI G C    +  A  L
Sbjct: 102 SDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRL 161

Query: 431 LFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKL------------------------- 465
              M   G +P   +Y  L+ G C   N    LKL                         
Sbjct: 162 FLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNII 221

Query: 466 --------------------------LDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQR 499
                                      +E + +GL  D+  +  LI   CK+ KV  A++
Sbjct: 222 VDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKK 281

Query: 500 LFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYA 559
           L  +M  +GI+ D V Y SL   +   G+  +  ++   M  +     +  Y      Y+
Sbjct: 282 LLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYS 341

Query: 560 K 560
           K
Sbjct: 342 K 342


>gi|356532610|ref|XP_003534864.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Glycine max]
          Length = 642

 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 122/469 (26%), Positives = 221/469 (47%), Gaps = 23/469 (4%)

Query: 46  VLLNLYNCCHIPSLSCAFFK--WAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEK 103
           V+   Y   H+P  +   F   W E      K +++S  ++++++ +   F  A      
Sbjct: 101 VMFKAYGKAHLPEKAVDLFHRMWGEFQC---KQTVKSFNSVLNVIVQEGLFNRALEFYNH 157

Query: 104 IALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMP 163
           +          V +  + IH     N+   + ++     L +    ++VF ++ + N  P
Sbjct: 158 V----------VASKSLNIHP----NALTFNLVIKAMCRLGLVDKAIEVFREIPLRNCAP 203

Query: 164 HLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLL 223
             +  + L++ L K+   D    +  +M   G   N+  +NVLI A CK  D+ +  KL+
Sbjct: 204 DNYTYSTLMHGLCKEERIDEAVSLLDEMQVEGTFPNLVAFNVLISALCKKGDLGRAAKLV 263

Query: 224 CEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCRE 283
             M  K    +  TYN L+   C KG   +A+++ ++M      P+ VT+ +LI+GF  +
Sbjct: 264 DNMFLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQ 323

Query: 284 GRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTY 341
           GR  +  R+   +  +G   N   Y++LI G C+     +A+ L + M  KG  P  + Y
Sbjct: 324 GRASDGTRVLVSLEARGHRGNEYVYSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVY 383

Query: 342 NSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLE 401
           ++++  LC+EG++ +A   L+EM  K   P++ T ++L+  Y + GD+  A+ V   M  
Sbjct: 384 SALIDGLCREGKLDEARGFLSEMKNKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMAN 443

Query: 402 AGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEA 461
              + ++  Y  LI+G CK  +   A  +   ML  G      +YS ++ G+CN N  E 
Sbjct: 444 NNCIHNEVCYSILINGLCKDGKFMEALMVWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQ 503

Query: 462 LLKLLDEFVSRGLCV--DVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG 508
            LKL ++ + +G  V  DV  Y  L+  FC ++ +  A  + N+M   G
Sbjct: 504 GLKLFNQMLCQGPVVQPDVITYNILLNAFCIQKSIFRAIDILNIMLDQG 552



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 108/384 (28%), Positives = 184/384 (47%), Gaps = 4/384 (1%)

Query: 160 NLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKV 219
           N+ P+     +++ ++ +  L D   +V++++       + + Y+ L+H  CK   +D+ 
Sbjct: 165 NIHPNALTFNLVIKAMCRLGLVDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEA 224

Query: 220 EKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHG 279
             LL EM+ +    +L  +N LI+  CKKG    A  + D M  +G  P+ VTYN+L+HG
Sbjct: 225 VSLLDEMQVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHG 284

Query: 280 FCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPG 337
            C +G++ +A  L   +      PN VT+ TLI+G+       +  R+   + A+G    
Sbjct: 285 LCLKGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGN 344

Query: 338 VVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKN 397
              Y+S++  LCKEG+   A  L  EM  K   P+ +  + LI+  C+ G    A    +
Sbjct: 345 EYVYSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLS 404

Query: 398 RMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKN 457
            M   G + + FTY +L+ G+ +A +   A  +   M +     +   YS L++G C   
Sbjct: 405 EMKNKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILINGLCKDG 464

Query: 458 NEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM--QGNGILGDSVI 515
                L +  + +SRG+ +DV  Y ++I  FC    V+   +LFN M  QG  +  D + 
Sbjct: 465 KFMEALMVWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQGLKLFNQMLCQGPVVQPDVIT 524

Query: 516 YTSLAYAYWRAGEPKACSDILDDM 539
           Y  L  A+          DIL+ M
Sbjct: 525 YNILLNAFCIQKSIFRAIDILNIM 548



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 94/335 (28%), Positives = 160/335 (47%), Gaps = 2/335 (0%)

Query: 230 DVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA 289
           ++  +  T+N +I   C+ G+  +A+ V   +     +PD  TY++L+HG C+E R+ EA
Sbjct: 165 NIHPNALTFNLVIKAMCRLGLVDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEA 224

Query: 290 RRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRK 347
             L  +  ++G  PN V +  LI   C+  DL  A +L + M  KG  P  VTYN+++  
Sbjct: 225 VSLLDEMQVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHG 284

Query: 348 LCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLD 407
           LC +G++  A  LLN+M   K  P++VT  TLIN +   G  +   +V   +   G   +
Sbjct: 285 LCLKGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGN 344

Query: 408 QFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLD 467
           ++ Y +LI G CK  + + A EL   M+  G  P+   YS L+DG C +   +     L 
Sbjct: 345 EYVYSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLS 404

Query: 468 EFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
           E  ++G   +   Y +L+R + +      A  ++  M  N  + + V Y+ L     + G
Sbjct: 405 EMKNKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILINGLCKDG 464

Query: 528 EPKACSDILDDMYRRRLMITLKIYRSFSASYAKDN 562
           +      +   M  R + + +  Y S    +   N
Sbjct: 465 KFMEALMVWKQMLSRGIKLDVVAYSSMIHGFCNAN 499



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 91/348 (26%), Positives = 172/348 (49%), Gaps = 7/348 (2%)

Query: 237 TYNTLIALYCKKGMHYEALAVQDRM---EREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           ++N+++ +  ++G+   AL   + +   +   I P+ +T+N +I   CR G + +A  +F
Sbjct: 134 SFNSVLNVIVQEGLFNRALEFYNHVVASKSLNIHPNALTFNLVIKAMCRLGLVDKAIEVF 193

Query: 294 RDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
           R+I  +   P++ TY+TL+ G C+   ++EA+ L + M  +G +P +V +N ++  LCK+
Sbjct: 194 REIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSLLDEMQVEGTFPNLVAFNVLISALCKK 253

Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
           G +  A +L++ M  K   P+ VT N L++  C  G    A+ + N+M+    + +  T+
Sbjct: 254 GDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQMVSNKCVPNDVTF 313

Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
             LI+GF           +L  +   G   +   YS L+ G C +      ++L  E V 
Sbjct: 314 GTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSLISGLCKEGKFNQAMELWKEMVG 373

Query: 472 RGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKA 531
           +G   +  VY ALI   C++ K+D A+   + M+  G L +S  Y+SL   Y+ AG+   
Sbjct: 374 KGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKGYLPNSFTYSSLMRGYFEAGDSHK 433

Query: 532 CSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD--LFWSHVVDRGL 577
              +  +M     +     Y        KD + ++  + W  ++ RG+
Sbjct: 434 AILVWKEMANNNCIHNEVCYSILINGLCKDGKFMEALMVWKQMLSRGI 481



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 101/365 (27%), Positives = 170/365 (46%), Gaps = 40/365 (10%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           + + + D+M+V    P+L A  VL+++L K        K+   M   G V N   YN L+
Sbjct: 223 EAVSLLDEMQVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALV 282

Query: 208 HACCKSSDVDKVEKLLCEM-----------------------------------EFKDVR 232
           H  C    ++K   LL +M                                   E +  R
Sbjct: 283 HGLCLKGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHR 342

Query: 233 ADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRL 292
            + + Y++LI+  CK+G   +A+ +   M  +G  P+ + Y++LI G CREG++ EAR  
Sbjct: 343 GNEYVYSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGF 402

Query: 293 FRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
             ++K  G  PN  TY++L+ GY  A D  +A+ + + MA        V Y+ ++  LCK
Sbjct: 403 LSEMKNKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILINGLCK 462

Query: 351 EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLML--DQ 408
           +G+  +A  +  +M  + I  D V  +++I+ +C        +K+ N+ML  G ++  D 
Sbjct: 463 DGKFMEALMVWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQGLKLFNQMLCQGPVVQPDV 522

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS-WLVDGYCNKNNEEALLKLLD 467
            TY  L++ FC  K +  A ++L  MLD G  P + +   +L     N N  +   + LD
Sbjct: 523 ITYNILLNAFCIQKSIFRAIDILNIMLDQGCDPDFITCDIFLKTLRENMNPPQDGREFLD 582

Query: 468 EFVSR 472
           E V R
Sbjct: 583 ELVVR 587



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 80/351 (22%), Positives = 140/351 (39%), Gaps = 57/351 (16%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           S+LN +V     P  N      L+  +       DG +V   +       + +  + L++
Sbjct: 296 SLLNQMVSNKCVP--NDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSLIS 353

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
            L K+   +   +++K+MV  G   N  +Y+ LI   C+   +D+    L EM+ K    
Sbjct: 354 GLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKGYLP 413

Query: 234 DLFTYNTLIALY-----------------------------------CKKGMHYEALAVQ 258
           + FTY++L+  Y                                   CK G   EAL V 
Sbjct: 414 NSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILINGLCKDGKFMEALMVW 473

Query: 259 DRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGAT--PNHVTYTTLIDGYC 314
            +M   GI  D+V Y+S+IHGFC    + +  +LF  +  +G    P+ +TY  L++ +C
Sbjct: 474 KQMLSRGIKLDVVAYSSMIHGFCNANLVEQGLKLFNQMLCQGPVVQPDVITYNILLNAFC 533

Query: 315 RANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE-GRIRDANRLLNEMNEKKIAPDN 373
               +  A+ +  +M  +G  P  +T +  L+ L +     +D    L+E          
Sbjct: 534 IQKSIFRAIDILNIMLDQGCDPDFITCDIFLKTLRENMNPPQDGREFLDE---------- 583

Query: 374 VTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEM 424
                L+    K   T  A K+   M+   L+    T+  ++   CK K +
Sbjct: 584 -----LVVRLVKRQRTIGASKIIEVMMHKFLLPKASTWAMVVQQVCKPKNV 629


>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
          Length = 974

 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 124/420 (29%), Positives = 195/420 (46%), Gaps = 3/420 (0%)

Query: 148 DG-LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           DG L++ + M    L+P  +   VL++ L K +  +    +  +M  LGV  + H Y++L
Sbjct: 259 DGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLL 318

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           I    K  + D  + L+ EM    +    + Y+  I +  K+G+  +A A+ D M   G+
Sbjct: 319 IDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGL 378

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALR 324
            P    Y SLI G+CRE  +R+   L  ++K      +  TY T++ G C + DL+ A  
Sbjct: 379 IPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYN 438

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           + + M A G  P VV Y ++++   +  R  DA R+L EM E+ IAPD    N+LI    
Sbjct: 439 IVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLS 498

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           K      A      M+E GL  + FTY A I G+ +A E   A + +  M + G  P+  
Sbjct: 499 KAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKV 558

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
             + L++ YC K             V +G+  D   Y  L+    K +KVD A+ +F  M
Sbjct: 559 LCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREM 618

Query: 505 QGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
           +G GI  D   Y  L   + + G  +  S I D+M    L   + IY      + +  EI
Sbjct: 619 RGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEI 678



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 103/407 (25%), Positives = 196/407 (48%), Gaps = 4/407 (0%)

Query: 160 NLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKV 219
           N+ P+++ C + +  ++K+ + +    ++  M+  G++     Y  LI   C+  +V + 
Sbjct: 344 NIKPYMYDCCICV--MSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQG 401

Query: 220 EKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHG 279
            +LL EM+ +++    +TY T++   C  G    A  +   M   G  P++V Y +LI  
Sbjct: 402 YELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKT 461

Query: 280 FCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPG 337
           F +  R  +A R+ +++K  G  P+   Y +LI G  +A  ++EA      M   G+ P 
Sbjct: 462 FLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPN 521

Query: 338 VVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKN 397
             TY + +    +      A++ + EM E  + P+ V C  LIN YCK      A     
Sbjct: 522 AFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYR 581

Query: 398 RMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKN 457
            M++ G++ D  TY  L++G  K  ++D A+E+   M   G +P   SY  L++G+    
Sbjct: 582 SMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLG 641

Query: 458 NEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYT 517
           N +    + DE V  GL  +V +Y  L+  FC+  +++ A+ L + M   G+  ++V Y 
Sbjct: 642 NMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYC 701

Query: 518 SLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
           ++   Y ++G+      + D+M  + L+    +Y +      + N++
Sbjct: 702 TIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDV 748



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 128/485 (26%), Positives = 228/485 (47%), Gaps = 27/485 (5%)

Query: 79  QSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVK---IHDDPDGNSHVLSW 135
           Q++ ++I    + K+ +    +L ++  R+ + +P     +VK      D DG  +++  
Sbjct: 383 QAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKE 442

Query: 136 L--------VIFYANLKMT-------QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRL 180
           +        V+ Y  L  T        D ++V  +M+   + P +     L+  L+K + 
Sbjct: 443 MIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKR 502

Query: 181 TDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNT 240
            D       +MV+ G+  N   Y   I    ++S+    +K + EM    V  +      
Sbjct: 503 MDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTG 562

Query: 241 LIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KG 298
           LI  YCKK    EA +    M  +GI  D  TY  L++G  +  ++ +A  +FR++  KG
Sbjct: 563 LINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKG 622

Query: 299 ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDAN 358
             P+  +Y  LI+G+ +  ++++A  + + M  +G+ P V+ YN +L   C+ G I  A 
Sbjct: 623 IAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAK 682

Query: 359 RLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGF 418
            LL+EM+ K + P+ VT  T+I+ YCK GD A A ++ + M   GL+ D F Y  L+ G 
Sbjct: 683 ELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGC 742

Query: 419 CKAKEMDIAKELLFGMLDAGFSPSYCSYS----WLVDGYCNKNNEEALLKLLDEFVSR-G 473
           C+  +++ A  + FG    G + S   ++    W+      +   E L +L+D    R G
Sbjct: 743 CRLNDVERAITI-FGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFG 801

Query: 474 LCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACS 533
              DV+ Y  +I   CK+  ++ A+ LF+ MQ   ++   + YTSL   Y + G      
Sbjct: 802 KPNDVT-YNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMF 860

Query: 534 DILDD 538
            + D+
Sbjct: 861 PVFDE 865



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 98/351 (27%), Positives = 181/351 (51%), Gaps = 20/351 (5%)

Query: 169 TVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEF 228
           TVL+N L K+   D   +++++M   G+  ++  Y VLI+   K  ++ K   +  EM  
Sbjct: 596 TVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVE 655

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
           + +  ++  YN L+  +C+ G   +A  + D M  +G+ P+ VTY ++I G+C+ G + E
Sbjct: 656 EGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAE 715

Query: 289 ARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILR 346
           A RLF +  +KG  P+   YTTL+DG CR ND+E A+ +      KG       +N+++ 
Sbjct: 716 AFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGT-NKKGCASSTAPFNALIN 774

Query: 347 KLCKEGRIRDANRLLNEMNEKKI----APDNVTCNTLINAYCKIGDTASAMKVKNRMLEA 402
            + K G+      +LN + +        P++VT N +I+  CK G+  +A ++ ++M  A
Sbjct: 775 WVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNA 834

Query: 403 GLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD----AGFSPSYCSYSWLVDGYCNKNN 458
            LM    TY +L++G+ K       +  +F + D    AG  P +  YS +++ +  +  
Sbjct: 835 NLMPTVITYTSLLNGYDKMGR----RAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGM 890

Query: 459 EEALLKLLDEFVSR-----GLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
               L L+D+  ++     G  + +S  RAL+  F K  +++ A+++   M
Sbjct: 891 TTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENM 941



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 99/357 (27%), Positives = 168/357 (47%), Gaps = 45/357 (12%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D  ++F +MR   + P + +  VL+N  +K         ++ +MV+ G+  N+ +YN+L+
Sbjct: 610 DAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLL 669

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
              C+S +++K ++LL EM  K +  +  TY T+I  YCK G   EA  + D M+ +G+ 
Sbjct: 670 GGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLV 729

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDIK--------------------GAT------- 300
           PD   Y +L+ G CR   +  A  +F   K                    G T       
Sbjct: 730 PDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVL 789

Query: 301 -------------PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRK 347
                        PN VTY  +ID  C+  +LE A  L   M    + P V+TY S+L  
Sbjct: 790 NRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNG 849

Query: 348 LCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRM-----LEA 402
             K GR  +   + +E     I PD++  + +INA+ K G T  A+ + ++M     ++ 
Sbjct: 850 YDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDD 909

Query: 403 GLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNE 459
           G  L   T +AL+ GF K  EM++A++++  M+   + P   +   L++  C  +N+
Sbjct: 910 GCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCISSNQ 966



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 87/312 (27%), Positives = 143/312 (45%), Gaps = 16/312 (5%)

Query: 269 DIVTYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTL-IDGYCRANDLEEALRLRE 327
           D+ TY+ LI   CR G ++    L +D+   T       TL +DG         AL+L+E
Sbjct: 220 DVKTYHMLIIAHCRAGNVQ----LGKDVLFKTEKEFRTATLNVDG---------ALKLKE 266

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
            M  KG+ P   TY+ ++  LCK  R+ DA  LL EM+   ++ DN T + LI+   K  
Sbjct: 267 SMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGR 326

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
           +  +A  + + M+  G+ +  + Y   I    K   M+ AK L  GM+ +G  P   +Y+
Sbjct: 327 NADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYA 386

Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGN 507
            L++GYC + N     +LL E   R + +    Y  +++  C    +D A  +   M  +
Sbjct: 387 SLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIAS 446

Query: 508 GILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSF--SASYAKDNEIL 565
           G   + VIYT+L   + +         +L +M  + +   +  Y S     S AK  +  
Sbjct: 447 GCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEA 506

Query: 566 DLFWSHVVDRGL 577
             F   +V+ GL
Sbjct: 507 RSFLVEMVENGL 518


>gi|225441858|ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Vitis vinifera]
          Length = 798

 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 145/538 (26%), Positives = 231/538 (42%), Gaps = 53/538 (9%)

Query: 57  PSLSCAFFKWAESAVPNYKHSLQS---HWTMIHILTKNKHFKSAQNMLEKIALRDFLSTP 113
           P L   FF W        + S +S   H  +I +L K+  F +   +LE++   +    P
Sbjct: 77  PELGFRFFIWT-----TRRRSFRSWVTHNLVIDMLAKDDGFDTYWKILEELKNSNIQIPP 131

Query: 114 SVLNALVKIH----------------DDPDGNSHVLSWLVIFYANLKMTQD-----GLQV 152
              + L+  +                 D      V ++  I +    M Q       L V
Sbjct: 132 PTFSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHV---MVQKEVFLLALAV 188

Query: 153 FDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCK 212
           ++QM   N  P+     +LLN L K+  TD   K++ +M Q G+  N  +Y +++   C+
Sbjct: 189 YNQMLKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQ 248

Query: 213 SSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVT 272
           +   D V +LL  M+      D  T N L+  +CK G   EA A+    E+EG    I  
Sbjct: 249 AKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKG 308

Query: 273 YNSLIHGFCREGRMREA----RRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
           Y+SLI G  R  R  E     R++F+   G  P+ V YT LI G+C    ++ AL +   
Sbjct: 309 YSSLIDGLFRAKRYDEVQEWCRKMFK--AGIEPDVVLYTILIRGFCEVGMVDYALNMLND 366

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M  +G+ P    YN++++  C  G +  A  L  E+++    P + T   LI   C+ G 
Sbjct: 367 MTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGL 426

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY----- 443
              A ++ N+M   G      T+ ALI G CKA E++ A+ L + M + G +PS      
Sbjct: 427 LDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKM-EIGKNPSLFLRLS 485

Query: 444 ---------CSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKV 494
                     S   +V+  C         KLL +    G+  D+  Y  LI  FCK + +
Sbjct: 486 QGADRVMDTASLQTMVERLCESGLILKAYKLLMQLADSGVVPDIMTYNVLINGFCKAKNI 545

Query: 495 DYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYR 552
           + A +LF  +Q  G   DSV Y +L   + R    +    +LD M +     +  +Y+
Sbjct: 546 NGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQMVKNGCTPSSAVYK 603



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 94/381 (24%), Positives = 178/381 (46%), Gaps = 25/381 (6%)

Query: 169 TVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEF 228
           T+L+  + ++ L D   +++ +M  LG   +I  +N LI   CK+ ++++   L  +ME 
Sbjct: 415 TILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKMEI 474

Query: 229 -------------KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNS 275
                         D   D  +  T++   C+ G+  +A  +  ++   G+ PDI+TYN 
Sbjct: 475 GKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLILKAYKLLMQLADSGVVPDIMTYNV 534

Query: 276 LIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKG 333
           LI+GFC+   +  A +LFR++  KG +P+ VTY TLIDG+ R +  E+A R+ + M   G
Sbjct: 535 LINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQMVKNG 594

Query: 334 VYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAM 393
             P    Y  ++   C++G++  A  L  +      + ++ T   L   + + G+   A+
Sbjct: 595 CTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRSLPSQEDETLK-LAEEHFEKGELEKAV 653

Query: 394 KVKNRMLEAGLMLDQF---TYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLV 450
           +    +LE    L+ F    Y   + G C+A+  + A ++   + +     +  S   L+
Sbjct: 654 RC---LLEMNFKLNNFEIAPYTIWLIGLCQARRSEEALKIFLVLKECQMDVNPPSCVMLI 710

Query: 451 DGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGIL 510
           +G C   N E  + +    + +G  +   +   L+R    ++K+ +A  L N M   G  
Sbjct: 711 NGLCKDGNLEMAVDIFLYTLEKGFMLMPRICNQLLRSLILQDKMKHALDLLNRMNSAGYD 770

Query: 511 GDSVIY---TSLAYAYWRAGE 528
            D  ++    S   + W+A E
Sbjct: 771 LDEYLHHRIKSYLLSVWKAQE 791



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 51/216 (23%), Positives = 100/216 (46%)

Query: 339 VTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNR 398
           VT+N ++  L K+       ++L E+    I     T + LI AY K G    A++   +
Sbjct: 97  VTHNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGK 156

Query: 399 MLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNN 458
           M + G   D FTY +++H   + +   +A  +   ML   ++P+  ++  L++G C    
Sbjct: 157 MKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGK 216

Query: 459 EEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTS 518
            +  LK+ DE   +G+  +  +Y  ++   C+ ++ D   RL N M+ +G   DS+   +
Sbjct: 217 TDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNA 276

Query: 519 LAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSF 554
           L   + + G+      +L    +   ++ +K Y S 
Sbjct: 277 LLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSL 312


>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
 gi|219887141|gb|ACL53945.1| unknown [Zea mays]
          Length = 522

 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 109/406 (26%), Positives = 202/406 (49%), Gaps = 2/406 (0%)

Query: 122 IHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLT 181
           +HD P  N    + L+          +   + D+M  H++ P     ++L + L +   +
Sbjct: 78  LHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGES 137

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
             +  ++ + ++ GV+   +  ++L++  CK   V K E++L  +    +      YNTL
Sbjct: 138 RTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTL 197

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GA 299
           I  YC+      A  + ++M+   I PD +TYN+LI+G C+   + +A  L  +++  G 
Sbjct: 198 INGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGV 257

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
            P+  T+ TLID Y  A  LE+   +   M  KG+   V+++ S+++  CK G+I +A  
Sbjct: 258 DPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVA 317

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
           +L++M  K +AP+    N++I+AY + GDT  A  +  +M  +G+     TY  L+ G C
Sbjct: 318 ILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLC 377

Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
           ++ ++D A+EL++ + + G  P   SY+ ++   CNK + +  L+LL E    G+   + 
Sbjct: 378 RSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLR 437

Query: 480 VYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWR 525
            Y  L+       +V   + L+  M    +   S IY  +  AY R
Sbjct: 438 TYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVR 483



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 106/422 (25%), Positives = 207/422 (49%), Gaps = 2/422 (0%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D L+VFD+M    ++P+      +++   K    +  +++  +M+  G   NI  YNVL+
Sbjct: 34  DALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLL 93

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
              C++  +D+   L+ EM    +  D FTY+ L     + G     L++     ++G+ 
Sbjct: 94  SGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVM 153

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
               T + L++G C++G++ +A ++   +   G  P  V Y TLI+GYC+  DL  A  +
Sbjct: 154 LGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCI 213

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
            E M ++ + P  +TYN+++  LCK   +  A  L+ EM +  + P   T NTLI+AY  
Sbjct: 214 FEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGT 273

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            G       V + M + G+  D  ++ +++  FCK  ++  A  +L  M+    +P+   
Sbjct: 274 AGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQV 333

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+ ++D Y    + E    L+++  + G+   +  Y  L++  C+  ++D A+ L   ++
Sbjct: 334 YNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLR 393

Query: 506 GNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEIL 565
             G+  D V Y ++  A    G+     ++L +M +  +  TL+ Y +  ++ A    + 
Sbjct: 394 NQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVH 453

Query: 566 DL 567
           D+
Sbjct: 454 DM 455



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 102/328 (31%), Positives = 164/328 (50%), Gaps = 2/328 (0%)

Query: 203 YNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRME 262
           YNV+I    +S       K+  EM    V  +  TYNT+I  + K G       ++D+M 
Sbjct: 19  YNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQML 78

Query: 263 REGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGAT--PNHVTYTTLIDGYCRANDLE 320
            +G  P+IVTYN L+ G CR GRM E R L  ++   +  P+  TY+ L DG  R  +  
Sbjct: 79  HDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESR 138

Query: 321 EALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLI 380
             L L      KGV  G  T + +L  LCK+G++  A ++L  +    + P  V  NTLI
Sbjct: 139 TMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLI 198

Query: 381 NAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFS 440
           N YC++ D   A  +  +M    +  D  TY ALI+G CK + +  A++L+  M  +G  
Sbjct: 199 NGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVD 258

Query: 441 PSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRL 500
           PS  +++ L+D Y      E    +L +   +G+  DV  + ++++ FCK  K+  A  +
Sbjct: 259 PSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAI 318

Query: 501 FNLMQGNGILGDSVIYTSLAYAYWRAGE 528
            + M    +  ++ +Y S+  AY  +G+
Sbjct: 319 LDDMIYKDVAPNAQVYNSIIDAYIESGD 346



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 95/309 (30%), Positives = 163/309 (52%), Gaps = 4/309 (1%)

Query: 260 RMER-EGISP-DIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCR 315
           RM R EG  P D  +YN +I G  R G+  +A ++F ++   G  PN +TY T+IDG+ +
Sbjct: 4   RMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVK 63

Query: 316 ANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVT 375
             DLE   RLR+ M   G  P +VTYN +L  LC+ GR+ +   L++EM    + PD  T
Sbjct: 64  GGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFT 123

Query: 376 CNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGML 435
            + L +   + G++ + + +    L+ G+ML  +T   L++G CK  ++  A+++L  ++
Sbjct: 124 YSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLV 183

Query: 436 DAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVD 495
             G  P+   Y+ L++GYC   +      + ++  SR +  D   Y ALI   CK E V 
Sbjct: 184 HTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVT 243

Query: 496 YAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFS 555
            A+ L   M+ +G+      + +L  AY  AG+ + C  +L DM ++ +   +  + S  
Sbjct: 244 KAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVV 303

Query: 556 ASYAKDNEI 564
            ++ K+ +I
Sbjct: 304 KAFCKNGKI 312



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 110/392 (28%), Positives = 175/392 (44%), Gaps = 45/392 (11%)

Query: 126 PDGNSHVLSWLVIFYANLKMTQDG---LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTD 182
           PDG ++      I +  L  T +    L +F +     +M   + C++LLN L KD    
Sbjct: 119 PDGFTYS-----ILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVA 173

Query: 183 MVWKVYKKMVQLGVVANIHLYNVLIHACCKSSD--------------------------- 215
              +V + +V  G+V    +YN LI+  C+  D                           
Sbjct: 174 KAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALI 233

Query: 216 --------VDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
                   V K E L+ EME   V   + T+NTLI  Y   G   +   V   M+++GI 
Sbjct: 234 NGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIK 293

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
            D++++ S++  FC+ G++ EA  +  D+  K   PN   Y ++ID Y  + D E+A  L
Sbjct: 294 SDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLL 353

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
            E M   GV   +VTYN +L+ LC+  +I +A  L+  +  + + PD V+ NT+I+A C 
Sbjct: 354 VEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCN 413

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            GDT  A+++   M + G+     TY  L+     A  +   + L   ML     PS   
Sbjct: 414 KGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSI 473

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVD 477
           Y  +VD Y    N+  +  L  E   +G+  D
Sbjct: 474 YGIMVDAYVRCENDSKVASLKKEMSEKGIAFD 505



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 93/337 (27%), Positives = 157/337 (46%), Gaps = 2/337 (0%)

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           D F+YN +IA   + G   +AL V D M   G+ P+ +TYN++I G  + G +    RL 
Sbjct: 15  DAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLR 74

Query: 294 RDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
             +   G  PN VTY  L+ G CRA  ++E   L + MA+  ++P   TY+ +   L + 
Sbjct: 75  DQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRT 134

Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
           G  R    L  E  +K +     TC+ L+N  CK G  A A +V   ++  GL+     Y
Sbjct: 135 GESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIY 194

Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
             LI+G+C+ +++  A  +   M      P + +Y+ L++G C          L+ E   
Sbjct: 195 NTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEK 254

Query: 472 RGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKA 531
            G+   V  +  LI  +    +++    + + MQ  GI  D + + S+  A+ + G+   
Sbjct: 255 SGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPE 314

Query: 532 CSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLF 568
              ILDDM  + +    ++Y S   +Y +  +    F
Sbjct: 315 AVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAF 351


>gi|225464138|ref|XP_002265372.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46100
           [Vitis vinifera]
 gi|296087974|emb|CBI35257.3| unnamed protein product [Vitis vinifera]
          Length = 503

 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 125/461 (27%), Positives = 211/461 (45%), Gaps = 61/461 (13%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHV 132
            ++HS Q+   MI  L    HF+ A+ +L ++       T  +  ++ +           
Sbjct: 45  GFRHSHQTFSLMISRLVSANHFRLAEELLCRMKEEKCNITEDIFLSICRA---------- 94

Query: 133 LSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMV 192
                  Y  +    D ++VF +M+ +   P   +   +   L  +    +  + Y+ M 
Sbjct: 95  -------YGRVHKPLDAVRVFRKMKEYECEPSQKSYITVFAILVGENQLKLALRFYRYMR 147

Query: 193 QLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHY 252
           ++G+  ++   NVLI A CK+S                                  G   
Sbjct: 148 EMGIPPSVASLNVLIKALCKNS----------------------------------GTMD 173

Query: 253 EALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLI 310
            AL +   M   G  PD  TY +LI+G CR G++ EA+ LF+++  K  +P  VTYT+LI
Sbjct: 174 AALRIFREMPNRGCPPDSYTYGTLINGLCRLGKIGEAKELFKEMETKACSPTVVTYTSLI 233

Query: 311 DGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIA 370
            G C++ DL+ A+RL E MA+KG+ P V TY+S++   CK G    A  LL+ M  ++  
Sbjct: 234 HGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRALELLDMMVSRRHL 293

Query: 371 PDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL 430
           P+ +T +TL++  CK G    A+++ +RM   GL  D   Y  +I GFC   +   A   
Sbjct: 294 PNMITYSTLVHGLCKEGKLQEAVEILDRMKLQGLRPDAGLYGKIISGFCDICKFHEAANF 353

Query: 431 LFGMLDAGFSPSYCSYSW-------LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRA 483
           L  M+  G SP+  ++S        +V G C ++   A  +L     +RG+ +D   + +
Sbjct: 354 LDEMVLGGISPNRLTWSLHVRIHNIVVQGLCTEHPNRAF-QLYLSMRTRGISIDAKTFDS 412

Query: 484 LIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYW 524
           L+  FC K  +  A  L + M  +G + D V + ++  A+W
Sbjct: 413 LVNYFCNKGDLHKAAHLVDEMVLDGCIPDEVTWNAVVCAFW 453



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 82/292 (28%), Positives = 147/292 (50%), Gaps = 10/292 (3%)

Query: 149 GLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIH 208
            L++F +M      P  +    L+N L +        +++K+M        +  Y  LIH
Sbjct: 175 ALRIFREMPNRGCPPDSYTYGTLINGLCRLGKIGEAKELFKEMETKACSPTVVTYTSLIH 234

Query: 209 ACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISP 268
             C+S D+D   +LL EM  K ++ ++FTY++L+  +CK G    AL + D M      P
Sbjct: 235 GLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRALELLDMMVSRRHLP 294

Query: 269 DIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLR 326
           +++TY++L+HG C+EG+++EA  +   +K  G  P+   Y  +I G+C      EA    
Sbjct: 295 NMITYSTLVHGLCKEGKLQEAVEILDRMKLQGLRPDAGLYGKIISGFCDICKFHEAANFL 354

Query: 327 EVMAAKGVYPGVVTY-------NSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTL 379
           + M   G+ P  +T+       N +++ LC E   R A +L   M  + I+ D  T ++L
Sbjct: 355 DEMVLGGISPNRLTWSLHVRIHNIVVQGLCTEHPNR-AFQLYLSMRTRGISIDAKTFDSL 413

Query: 380 INAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
           +N +C  GD   A  + + M+  G + D+ T+ A++  F   +++  + EL+
Sbjct: 414 VNYFCNKGDLHKAAHLVDEMVLDGCIPDEVTWNAVVCAFWDRRKVRESAELV 465



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 72/283 (25%), Positives = 135/283 (47%), Gaps = 15/283 (5%)

Query: 126 PDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVW 185
           PD  S+    L+     L    +  ++F +M      P +   T L++ L + +  D   
Sbjct: 189 PD--SYTYGTLINGLCRLGKIGEAKELFKEMETKACSPTVVTYTSLIHGLCQSKDLDSAI 246

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
           ++ ++M   G+  N+  Y+ L+   CKS    +  +LL  M  +    ++ TY+TL+   
Sbjct: 247 RLLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRALELLDMMVSRRHLPNMITYSTLVHGL 306

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNH 303
           CK+G   EA+ + DRM+ +G+ PD   Y  +I GFC   +  EA     +  + G +PN 
Sbjct: 307 CKEGKLQEAVEILDRMKLQGLRPDAGLYGKIISGFCDICKFHEAANFLDEMVLGGISPNR 366

Query: 304 VTYT-------TLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRD 356
           +T++        ++ G C  +    A +L   M  +G+     T++S++   C +G +  
Sbjct: 367 LTWSLHVRIHNIVVQGLCTEHP-NRAFQLYLSMRTRGISIDAKTFDSLVNYFCNKGDLHK 425

Query: 357 ANRLLNEMNEKKIAPDNVTCNTLINAYC---KIGDTASAMKVK 396
           A  L++EM      PD VT N ++ A+    K+ ++A  ++V+
Sbjct: 426 AAHLVDEMVLDGCIPDEVTWNAVVCAFWDRRKVRESAELVQVE 468



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 66/276 (23%), Positives = 107/276 (38%), Gaps = 7/276 (2%)

Query: 298 GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDA 357
           G   +H T++ +I     AN    A  L   M  +        + SI R   +  +  DA
Sbjct: 45  GFRHSHQTFSLMISRLVSANHFRLAEELLCRMKEEKCNITEDIFLSICRAYGRVHKPLDA 104

Query: 358 NRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHG 417
            R+  +M E +  P   +  T+            A++    M E G+     +   LI  
Sbjct: 105 VRVFRKMKEYECEPSQKSYITVFAILVGENQLKLALRFYRYMREMGIPPSVASLNVLIKA 164

Query: 418 FCK-AKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCV 476
            CK +  MD A  +   M + G  P   +Y  L++G C         +L  E  ++    
Sbjct: 165 LCKNSGTMDAALRIFREMPNRGCPPDSYTYGTLINGLCRLGKIGEAKELFKEMETKACSP 224

Query: 477 DVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDIL 536
            V  Y +LI   C+ + +D A RL   M   GI  +   Y+SL   + ++G      ++L
Sbjct: 225 TVVTYTSLIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRALELL 284

Query: 537 DDMYRRRLMITLKIYRSFSASYAKDN------EILD 566
           D M  RR +  +  Y +      K+       EILD
Sbjct: 285 DMMVSRRHLPNMITYSTLVHGLCKEGKLQEAVEILD 320


>gi|334183592|ref|NP_001185295.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179660|sp|Q9LQ15.1|PPR95_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62914, mitochondrial; Flags: Precursor
 gi|8493579|gb|AAF75802.1|AC011000_5 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats. EST gb|AA728420 comes from this gene
           [Arabidopsis thaliana]
 gi|332195900|gb|AEE34021.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 528

 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 115/377 (30%), Positives = 193/377 (51%), Gaps = 2/377 (0%)

Query: 154 DQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKS 213
           ++M +  +  +L+   +L+N   +     +   +  KM++LG   +I   N L++  C  
Sbjct: 102 EKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHG 161

Query: 214 SDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTY 273
           + +     L+ +M     + D  T+ TLI          EA+A+ DRM + G  PD+VTY
Sbjct: 162 NRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTY 221

Query: 274 NSLIHGFCREGRMREARRLFRDIKGA--TPNHVTYTTLIDGYCRANDLEEALRLREVMAA 331
            ++++G C+ G    A  L   ++ A    N V Y+T+ID  C+    ++AL L   M  
Sbjct: 222 GAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMEN 281

Query: 332 KGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTAS 391
           KGV P V+TY+S++  LC  GR  DA+RLL++M E+KI P+ VT + LI+A+ K G    
Sbjct: 282 KGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVK 341

Query: 392 AMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVD 451
           A K+   M++  +  + FTY +LI+GFC    +  AK++L  M+     P+  +Y+ L++
Sbjct: 342 AEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLIN 401

Query: 452 GYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILG 511
           G+C     +  ++L  E   RGL  +   Y  LI  F +    D AQ +F  M   G+  
Sbjct: 402 GFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHP 461

Query: 512 DSVIYTSLAYAYWRAGE 528
           + + Y  L     + G+
Sbjct: 462 NILTYNILLDGLCKNGK 478



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 114/381 (29%), Positives = 197/381 (51%), Gaps = 2/381 (0%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D + +F  M      P +   + LL+++AK    D+V    +KM  LG+  N++ YN+LI
Sbjct: 61  DAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILI 120

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           +  C+ S +     LL +M       D+ T N+L+  +C      +A+A+ D+M   G  
Sbjct: 121 NCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYK 180

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
           PD VT+ +LIHG     +  EA  L   +  +G  P+ VTY  +++G C+  D + AL L
Sbjct: 181 PDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNL 240

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
              M A  +   VV Y++++  LCK     DA  L  EM  K + P+ +T ++LI+  C 
Sbjct: 241 LNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCN 300

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            G  + A ++ + M+E  +  +  T+ ALI  F K  ++  A++L   M+     P+  +
Sbjct: 301 YGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFT 360

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           YS L++G+C  +      ++L+  + +    +V  Y  LI  FCK ++VD    LF  M 
Sbjct: 361 YSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMS 420

Query: 506 GNGILGDSVIYTSLAYAYWRA 526
             G++G++V YT+L + +++A
Sbjct: 421 QRGLVGNTVTYTTLIHGFFQA 441



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 106/370 (28%), Positives = 175/370 (47%), Gaps = 41/370 (11%)

Query: 163 PHLHACTVLLNSLA-KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEK 221
           P +     LLN     +R++D V  V  +MV++G   +   +  LIH     +   +   
Sbjct: 146 PDIVTLNSLLNGFCHGNRISDAVALV-DQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVA 204

Query: 222 LLCEMEFKDVRADLFTYNTLIALYCKKG-------------------------------- 249
           L+  M  +  + DL TY  ++   CK+G                                
Sbjct: 205 LIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLC 264

Query: 250 ---MHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHV 304
                 +AL +   ME +G+ P+++TY+SLI   C  GR  +A RL  D+  +   PN V
Sbjct: 265 KYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLV 324

Query: 305 TYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM 364
           T++ LID + +   L +A +L E M  + + P + TY+S++   C   R+ +A ++L  M
Sbjct: 325 TFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELM 384

Query: 365 NEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEM 424
             K   P+ VT NTLIN +CK       M++   M + GL+ +  TY  LIHGF +A++ 
Sbjct: 385 IRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDC 444

Query: 425 DIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG-LCVDVSVYRA 483
           D A+ +   M+  G  P+  +Y+ L+DG C KN + A   ++ E++ R  +  D+  Y  
Sbjct: 445 DNAQMVFKQMVSVGVHPNILTYNILLDGLC-KNGKLAKAMVVFEYLQRSTMEPDIYTYNI 503

Query: 484 LIRRFCKKEK 493
           +I   CK  K
Sbjct: 504 MIEGMCKAGK 513



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 102/381 (26%), Positives = 179/381 (46%), Gaps = 29/381 (7%)

Query: 47  LLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIAL 106
           LLN +  CH   +S A     +     YK    +  T+IH L  +     A  +++++  
Sbjct: 154 LLNGF--CHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQ 211

Query: 107 R----DFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLM 162
           R    D ++  +V+N L K  D                     T   L + ++M    + 
Sbjct: 212 RGCQPDLVTYGAVVNGLCKRGD---------------------TDLALNLLNKMEAAKIE 250

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
            ++   + +++SL K R  D    ++ +M   GV  N+  Y+ LI   C         +L
Sbjct: 251 ANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRL 310

Query: 223 LCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR 282
           L +M  + +  +L T++ LI  + KKG   +A  + + M +  I P+I TY+SLI+GFC 
Sbjct: 311 LSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCM 370

Query: 283 EGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVT 340
             R+ EA+++   +  K   PN VTY TLI+G+C+A  +++ + L   M+ +G+    VT
Sbjct: 371 LDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVT 430

Query: 341 YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML 400
           Y +++    +     +A  +  +M    + P+ +T N L++  CK G  A AM V   + 
Sbjct: 431 YTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQ 490

Query: 401 EAGLMLDQFTYKALIHGFCKA 421
            + +  D +TY  +I G CKA
Sbjct: 491 RSTMEPDIYTYNIMIEGMCKA 511



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 85/304 (27%), Positives = 142/304 (46%), Gaps = 2/304 (0%)

Query: 253 EALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR--DIKGATPNHVTYTTLI 310
           +A+ +   M +    P I+ ++ L+    +  +           +I G + N  TY  LI
Sbjct: 61  DAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILI 120

Query: 311 DGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIA 370
           + +CR + L  AL L   M   G  P +VT NS+L   C   RI DA  L+++M E    
Sbjct: 121 NCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYK 180

Query: 371 PDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL 430
           PD VT  TLI+        + A+ + +RM++ G   D  TY A+++G CK  + D+A  L
Sbjct: 181 PDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNL 240

Query: 431 LFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCK 490
           L  M  A    +   YS ++D  C   +E+  L L  E  ++G+  +V  Y +LI   C 
Sbjct: 241 LNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCN 300

Query: 491 KEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKI 550
             +   A RL + M    I  + V +++L  A+ + G+      + ++M +R +   +  
Sbjct: 301 YGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFT 360

Query: 551 YRSF 554
           Y S 
Sbjct: 361 YSSL 364



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 79/159 (49%)

Query: 127 DGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWK 186
           D N    S L+  +  L    +  Q+ + M   + +P++     L+N   K +  D   +
Sbjct: 355 DPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGME 414

Query: 187 VYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYC 246
           ++++M Q G+V N   Y  LIH   ++ D D  + +  +M    V  ++ TYN L+   C
Sbjct: 415 LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLC 474

Query: 247 KKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGR 285
           K G   +A+ V + ++R  + PDI TYN +I G C+ G+
Sbjct: 475 KNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 513



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/231 (23%), Positives = 101/231 (43%), Gaps = 3/231 (1%)

Query: 341 YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML 400
           Y  +LR    +  + DA  L   M + +  P  +  + L++A  K+      +    +M 
Sbjct: 46  YREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKME 105

Query: 401 EAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEE 460
             G+  + +TY  LI+ FC+   + +A  LL  M+  G+ P   + + L++G+C+ N   
Sbjct: 106 ILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRIS 165

Query: 461 ALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLA 520
             + L+D+ V  G   D   +  LI       K   A  L + M   G   D V Y ++ 
Sbjct: 166 DAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVV 225

Query: 521 YAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSAS---YAKDNEILDLF 568
               + G+     ++L+ M   ++   + IY +   S   Y  +++ L+LF
Sbjct: 226 NGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLF 276


>gi|218191848|gb|EEC74275.1| hypothetical protein OsI_09511 [Oryza sativa Indica Group]
          Length = 933

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 115/414 (27%), Positives = 204/414 (49%), Gaps = 37/414 (8%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           L +  +M    ++  L   T L++ L K   TD V    +  +   +  N   Y VLI A
Sbjct: 329 LSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDA 388

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
            CK+ +VD+ E++L EME K +  ++ T++++I  + K+G+  +A   +  M+  GI+P+
Sbjct: 389 LCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPN 448

Query: 270 IVTYNSLIHGFCR-----------------------------------EGRMREARRLFR 294
           +VTY +LI GF +                                    G++ EA  LF+
Sbjct: 449 VVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMALFK 508

Query: 295 DIKGA--TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEG 352
           D  G+  + +HV YTTLIDG  +A D+  A +  + +  + + P  V YN  +  LC  G
Sbjct: 509 DASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILG 568

Query: 353 RIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYK 412
           + ++A  +L EM    + PD  T NT+I ++C+ G+TA A+K+ + M  + +  +  TY 
Sbjct: 569 KFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYN 628

Query: 413 ALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSR 472
            L+ G      ++ AK LL  M+ AGFSPS  ++  ++         + +L + +  ++ 
Sbjct: 629 TLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNA 688

Query: 473 GLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRA 526
           GL  D++VY  L++  C       A  +   M G+GI  D++ + +L   + ++
Sbjct: 689 GLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKS 742



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 110/376 (29%), Positives = 187/376 (49%), Gaps = 2/376 (0%)

Query: 181 TDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNT 240
           T     V  +M   G+  ++  YN L+   C++  VD    +L  M+   V  ++ TY  
Sbjct: 185 TPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTP 244

Query: 241 LIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--G 298
            I  YC+     EA  + + M R G+  D+VT ++L+ G CR+GR  EA  LFR++   G
Sbjct: 245 FIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVG 304

Query: 299 ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDAN 358
           A PNHVTY TLID   +A   +E L L   M ++GV   +VTY +++  L K+G+  +  
Sbjct: 305 AVPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVK 364

Query: 359 RLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGF 418
             L       ++ + VT   LI+A CK  +   A +V   M E  +  +  T+ ++I+GF
Sbjct: 365 DTLRFALSDNLSLNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGF 424

Query: 419 CKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDV 478
            K   +D A E    M + G +P+  +Y  L+DG+     ++A L++  + +  G+ V+ 
Sbjct: 425 VKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNK 484

Query: 479 SVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDD 538
            +  +L+    +  K++ A  LF    G+G+  D V YT+L    ++AG+         +
Sbjct: 485 FIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQE 544

Query: 539 MYRRRLMITLKIYRSF 554
           +  R ++    +Y  F
Sbjct: 545 LMDRNMLPDAVVYNVF 560



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 105/376 (27%), Positives = 180/376 (47%), Gaps = 2/376 (0%)

Query: 169 TVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEF 228
           T L++ L K       +K  ++++   ++ +  +YNV I+  C      + + +L EM  
Sbjct: 523 TTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAKSILTEMRN 582

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
             ++ D  TYNT+I  +C+KG   +AL +   M+   I P+++TYN+L+ G    G + +
Sbjct: 583 MGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEK 642

Query: 289 ARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILR 346
           A+ L  ++   G +P+ +T+  ++    ++  L+  L + E M   G++  +  YN++L+
Sbjct: 643 AKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQ 702

Query: 347 KLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLML 406
            LC  G  R A  +L EM    IAPD +T N LI  +CK     +A     +ML   +  
Sbjct: 703 VLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISP 762

Query: 407 DQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLL 466
           +  T+  L+ G      +  A  +L  M  +G  P+  +Y  LV G+  ++N+   ++L 
Sbjct: 763 NIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILVTGHGKQSNKVEAMRLY 822

Query: 467 DEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRA 526
            E V +G    VS Y ALI  F K   +  A+ LF  MQ  G+   S  Y  L   + R 
Sbjct: 823 CEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRI 882

Query: 527 GEPKACSDILDDMYRR 542
                    L DM  +
Sbjct: 883 RNGTEVKKCLKDMKEK 898



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 137/582 (23%), Positives = 253/582 (43%), Gaps = 41/582 (7%)

Query: 28  KLLNPNIA---SSLTSTAIHKVLLN-LYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWT 83
           +LL P IA   SS  +T  + +LL  L +  H P++     +  +  VP    ++    T
Sbjct: 87  RLLRPAIALLRSSRPTTVAYNILLAALSDHAHAPAV---LAEMCKRGVPFDGVTVN---T 140

Query: 84  MIHILTKNKHFKSAQNMLEK---IALRDFLSTPSVLNALVKIHDDPDG-------NSHVL 133
           ++  L +N    +A  + ++   I   D +   +++    ++ D P          +  L
Sbjct: 141 LLAGLCRNGQVDAAAALADRGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGL 200

Query: 134 SWLVIFYANL-------KMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWK 186
              V+ Y  L               V D M+   + P++   T  +    + +  +  + 
Sbjct: 201 PMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFD 260

Query: 187 VYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYC 246
           +Y+ MV+ GV+ ++   + L+   C+     +   L  EM+      +  TY TLI    
Sbjct: 261 LYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAVPNHVTYCTLIDSLA 320

Query: 247 KKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHV 304
           K G   E L++   M   G+  D+VTY +L+    ++G+  E +   R       + N V
Sbjct: 321 KAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSLNGV 380

Query: 305 TYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM 364
           TYT LID  C+A++++EA ++   M  K + P VVT++S++    K G +  A      M
Sbjct: 381 TYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMM 440

Query: 365 NEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEM 424
            E+ I P+ VT  TLI+ + K     +A++V + ML  G+ +++F   +L++G  +  ++
Sbjct: 441 KERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKI 500

Query: 425 DIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRAL 484
           + A  L      +G S  + +Y+ L+DG     +     K   E + R +  D  VY   
Sbjct: 501 EEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVF 560

Query: 485 IRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL 544
           I   C   K   A+ +   M+  G+  D   Y ++  ++ R GE      +L +M    +
Sbjct: 561 INCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSI 620

Query: 545 MITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKEM 586
              L  Y +  A          LF +  V++   +K++  EM
Sbjct: 621 KPNLITYNTLVAG---------LFGTGAVEK---AKYLLNEM 650



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 102/379 (26%), Positives = 164/379 (43%), Gaps = 37/379 (9%)

Query: 160 NLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKV 219
           N++P      V +N L           +  +M  +G+  +   YN +I + C+  +  K 
Sbjct: 549 NMLPDAVVYNVFINCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKA 608

Query: 220 EKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISP----------- 268
            KLL EM+   ++ +L TYNTL+A     G   +A  + + M   G SP           
Sbjct: 609 LKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQA 668

Query: 269 ------------------------DIVTYNSLIHGFCREGRMREARRLFRDIKGA--TPN 302
                                   DI  YN+L+   C  G  R+A  +  ++ G+   P+
Sbjct: 669 CSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPD 728

Query: 303 HVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLN 362
            +T+  LI G+C+++ L+ A      M  + + P + T+N++L  L   GRI +A  +L 
Sbjct: 729 TITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLI 788

Query: 363 EMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAK 422
           EM +  + P+N+T + L+  + K  +   AM++   M+  G +    TY ALI  F KA 
Sbjct: 789 EMEKSGLEPNNLTYDILVTGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAG 848

Query: 423 EMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYR 482
            M  AKEL   M   G  P+ C+Y  LV G+    N   + K L +   +G         
Sbjct: 849 MMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLS 908

Query: 483 ALIRRFCKKEKVDYAQRLF 501
            + R F K      AQRL 
Sbjct: 909 FICRAFSKPGMTWQAQRLL 927



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 112/405 (27%), Positives = 187/405 (46%), Gaps = 21/405 (5%)

Query: 152 VFDQMRVHNLMP-HLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           +F +M     +P H+  CT L++SLAK      +  +  +MV  GVV ++  Y  L+   
Sbjct: 296 LFREMDKVGAVPNHVTYCT-LIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWL 354

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
            K    D+V+  L      ++  +  TY  LI   CK     EA  V   ME + ISP++
Sbjct: 355 GKQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNV 414

Query: 271 VTYNSLIHGFCREG---RMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLRE 327
           VT++S+I+GF + G   +  E +R+ ++ +G  PN VTY TLIDG+ +    + AL +  
Sbjct: 415 VTFSSVINGFVKRGLLDKATEYKRMMKE-RGINPNVVTYGTLIDGFFKFQGQDAALEVYH 473

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
            M  +GV       +S++  L + G+I +A  L  + +   ++ D+V   TLI+   K G
Sbjct: 474 DMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAG 533

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
           D  +A K    +++  ++ D   Y   I+  C   +   AK +L  M + G  P   +Y+
Sbjct: 534 DMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAKSILTEMRNMGLKPDQSTYN 593

Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGN 507
            ++  +C K      LKLL E     +  ++  Y  L+        V+ A+ L N M   
Sbjct: 594 TMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSA 653

Query: 508 GILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYR 552
           G    S+ +  +          +ACS        RRL + L I+ 
Sbjct: 654 GFSPSSLTHRRVL---------QACSQ------SRRLDVILDIHE 683



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 90/301 (29%), Positives = 143/301 (47%), Gaps = 10/301 (3%)

Query: 269 DIVTYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
           D  + N+L++  CR   +R A  L R  +   P  V Y  L+      +D   A  +   
Sbjct: 72  DPASLNALLYSHCRLRLLRPAIALLRSSR---PTTVAYNILLAAL---SDHAHAPAVLAE 125

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M  +GV    VT N++L  LC+ G++ DA   L +      A D +  NTLI  YC++GD
Sbjct: 126 MCKRGVPFDGVTVNTLLAGLCRNGQV-DAAAALADRGGGIHALDVIGWNTLIAGYCRVGD 184

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
           T +A+ V +RM   GL +D   Y  L+ GFC+A ++D A+ +L  M +AG  P+  +Y+ 
Sbjct: 185 TPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTP 244

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG 508
            +  YC     E    L +  V  G+ +DV    AL+   C+  +   A  LF  M   G
Sbjct: 245 FIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVG 304

Query: 509 ILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFS---ASYAKDNEIL 565
            + + V Y +L  +  +AG  K    +L +M  R +++ L  Y +         K +E+ 
Sbjct: 305 AVPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVK 364

Query: 566 D 566
           D
Sbjct: 365 D 365



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 87/346 (25%), Positives = 160/346 (46%), Gaps = 4/346 (1%)

Query: 106 LRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHL 165
           L  F    S+L  +  +   PD +++  + +++ +     T   L++  +M++ ++ P+L
Sbjct: 567 LGKFKEAKSILTEMRNMGLKPDQSTY--NTMIVSHCRKGETAKALKLLHEMKMSSIKPNL 624

Query: 166 HACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCE 225
                L+  L      +    +  +MV  G   +   +  ++ AC +S  +D +  +   
Sbjct: 625 ITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEW 684

Query: 226 MEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGR 285
           M    + AD+  YNTL+ + C  GM  +A  V + M   GI+PD +T+N+LI G C+   
Sbjct: 685 MMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSH 744

Query: 286 MREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNS 343
           +  A   +  +  +  +PN  T+ TL+ G      + EA  +   M   G+ P  +TY+ 
Sbjct: 745 LDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDI 804

Query: 344 ILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAG 403
           ++    K+    +A RL  EM  K   P   T N LI+ + K G    A ++   M + G
Sbjct: 805 LVTGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRG 864

Query: 404 LMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
           +     TY  L+ G+ + +     K+ L  M + GFSPS  + S++
Sbjct: 865 VHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFI 910



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 61/256 (23%), Positives = 108/256 (42%), Gaps = 23/256 (8%)

Query: 324 RLREVMAAKGVYPGVVTY--------NSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVT 375
           RL   +A  G+    + +        N++L   C+   +R A  LL     +   P  V 
Sbjct: 51  RLIPALATSGLAAAAIRFRPADPASLNALLYSHCRLRLLRPAIALL-----RSSRPTTVA 105

Query: 376 CNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGML 435
            N L+ A   + D A A  V   M + G+  D  T   L+ G C+  ++D A  L     
Sbjct: 106 YNILLAA---LSDHAHAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALA---- 158

Query: 436 DAG---FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKE 492
           D G    +     ++ L+ GYC   +  A L + D   ++GL +DV  Y  L+  FC+  
Sbjct: 159 DRGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAG 218

Query: 493 KVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYR 552
           +VD A+ + ++M+  G+  +   YT     Y R    +   D+ + M R  +++ +    
Sbjct: 219 QVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLS 278

Query: 553 SFSASYAKDNEILDLF 568
           +  A   +D    + +
Sbjct: 279 ALVAGLCRDGRFSEAY 294


>gi|147846788|emb|CAN80625.1| hypothetical protein VITISV_032617 [Vitis vinifera]
          Length = 733

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 121/509 (23%), Positives = 233/509 (45%), Gaps = 21/509 (4%)

Query: 63  FFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKI 122
           FF WA+     Y+H    ++ M+ IL+K K  + A+ +L  +A R     P         
Sbjct: 120 FFYWADRQW-RYRHDPIVYYAMLEILSKTKLCQGAKRVLRLMAKRRIERRP--------- 169

Query: 123 HDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTD 182
                       ++++ Y+     ++ ++    M+   + P L  C   ++ L      D
Sbjct: 170 --------EAFGYVMVSYSRAGKLRNAMRXLTMMQKAGIEPDLSICNTAIHVLVMGNRLD 221

Query: 183 MVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLI 242
              +  ++M  + +  N+  YN LI   C    ++   +L+ EM FK    D  +Y T++
Sbjct: 222 KAVRFLERMQIVEIXPNVITYNCLIKGYCDLHRLEDAXELIAEMPFKGCSPDKISYYTVM 281

Query: 243 ALYCKKGMHYEALAVQDRMEREG-ISPDIVTYNSLIHGFCREGRMREARRLFRDIKGAT- 300
              CK+    E   + ++M ++  + PD VTYN+ +H   + G   EA    R+ +    
Sbjct: 282 GFLCKEKRIKELRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRF 341

Query: 301 -PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
             + V Y+ ++  +CR   +++A  +   M +KG  P VVTY S++  LC+E ++  A +
Sbjct: 342 RVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKK 401

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
           +L +M +    P+ V+   L+N  CK G++  A ++ N   E   + +  TY  L+HGF 
Sbjct: 402 MLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEXWWIPNAITYSVLMHGFR 461

Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
           +  +   A +L+  M+  GF P+    + L+   C +   +   + +++ ++ G  V+V 
Sbjct: 462 REGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVV 521

Query: 480 VYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
            +  +I  FC+K+ ++ A  L + M  +    D V YT++  A  + G  +  + +   M
Sbjct: 522 NFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKM 581

Query: 540 YRRRLMITLKIYRSFSASYAKDNEILDLF 568
            R   + T   YR+    Y +   + DL 
Sbjct: 582 LRVGWIPTPVTYRTVIHQYCRMGRVEDLL 610


>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
          Length = 684

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 125/493 (25%), Positives = 234/493 (47%), Gaps = 40/493 (8%)

Query: 132 VLSWLVIFYANLKMTQDG--LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYK 189
           V+++ V+  A  K T  G  ++V D+MR     P++    V++N + ++   D   +   
Sbjct: 180 VVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLN 239

Query: 190 KMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKG 249
           ++   G   +   Y  ++   C +   + VE+L  EM  K+   +  T++ L+  +C+ G
Sbjct: 240 RLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGG 299

Query: 250 MHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYT 307
           M   A+ V ++M   G + +    N +I+  C++GR+ +A +   ++   G +P+ ++YT
Sbjct: 300 MVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYT 359

Query: 308 TLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEK 367
           T++ G CRA   E+A  L + M  K   P  VT+N+ +  LC++G I  A  L+ +M+E 
Sbjct: 360 TVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEH 419

Query: 368 KIAPDNVTCNTLINAYCKIGDTASAMKV----------------------KNRMLEAGLM 405
               + VT N L+N +C  G   SA+++                        R+  A  +
Sbjct: 420 GCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKPNTITYTTLLTGLCNAERLDAAAEL 479

Query: 406 LDQF----------TYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCN 455
           L +           T+  L+  FC+   MD A EL+  M++ G +P+  +Y+ L+DG  N
Sbjct: 480 LAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITN 539

Query: 456 KNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVI 515
             N E  L+LL   VS G+  D+  Y ++I    ++++V+ A ++F+++Q  G+   +VI
Sbjct: 540 DCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVI 599

Query: 516 YTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDN---EILDLFWSHV 572
           Y  +  A  +        D    M     M     Y +     A ++   E  DL    +
Sbjct: 600 YNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLL-REL 658

Query: 573 VDRGLMSKHIFKE 585
             RG+++K++ +E
Sbjct: 659 CSRGVLNKNLLEE 671



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 120/460 (26%), Positives = 205/460 (44%), Gaps = 46/460 (10%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           +  ++ D+       P ++ CT L+ +L +   T    +V +   + G   ++  YN L+
Sbjct: 61  EAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLV 120

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALA----------- 256
              C+   +D   +L+  M    V  D +TY  +I   C +G   EAL+           
Sbjct: 121 AGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQ 177

Query: 257 ------------------------VQDRMEREGISPDIVTYNSLIHGFCREGRMREARRL 292
                                   V D M  +G +P+IVTYN +I+G CREGR+ +AR  
Sbjct: 178 PSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREF 237

Query: 293 FRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
              +   G  P+ V+YTT++ G C A   E+   L   M  K   P  VT++ ++R  C+
Sbjct: 238 LNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCR 297

Query: 351 EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
            G +  A ++L +M+    A +   CN +IN  CK G    A +  N M   G   D  +
Sbjct: 298 GGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTIS 357

Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFV 470
           Y  ++ G C+A+  + AKELL  M+     P+  +++  +   C K   E    L+++  
Sbjct: 358 YTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMS 417

Query: 471 SRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPK 530
             G  V++  Y AL+  FC + +VD A  LF  M       +++ YT+L      A    
Sbjct: 418 EHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK---PNTITYTTLLTGLCNAERLD 474

Query: 531 ACSDILDDMYRRRL---MITLKIYRSFSASYAKDNEILDL 567
           A +++L +M ++     ++T  +  SF       +E ++L
Sbjct: 475 AAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIEL 514



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 100/387 (25%), Positives = 186/387 (48%), Gaps = 1/387 (0%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N      LV F+    M +  +QV +QM  H    +   C +++N++ K    D  ++  
Sbjct: 284 NEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFL 343

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
             M   G   +   Y  ++   C++   +  ++LL EM  K+   +  T+NT I + C+K
Sbjct: 344 NNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQK 403

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYTT 308
           G+  +A  + ++M   G   +IVTYN+L++GFC +GR+  A  LF  +    PN +TYTT
Sbjct: 404 GLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP-CKPNTITYTT 462

Query: 309 LIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKK 368
           L+ G C A  L+ A  L   M  K   P VVT+N ++   C++G + +A  L+ +M E  
Sbjct: 463 LLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHG 522

Query: 369 IAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAK 428
             P+ +T NTL++      ++  A+++ + ++  G+  D  TY ++I    +   ++ A 
Sbjct: 523 CTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAI 582

Query: 429 ELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRF 488
           ++   + D G  P    Y+ ++   C + N +  +      VS G   +   Y  LI   
Sbjct: 583 KMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGL 642

Query: 489 CKKEKVDYAQRLFNLMQGNGILGDSVI 515
             ++ +   + L   +   G+L  +++
Sbjct: 643 ANEDFLKETRDLLRELCSRGVLNKNLL 669



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 106/394 (26%), Positives = 174/394 (44%), Gaps = 40/394 (10%)

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
           P  +  T ++  L           +   M+  G   ++  Y VL+ A CKS+   +  ++
Sbjct: 143 PDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEV 202

Query: 223 LCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR 282
           L EM  K    ++ TYN +I   C++G   +A    +R+   G  PD V+Y +++ G C 
Sbjct: 203 LDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCA 262

Query: 283 EGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAK-------- 332
             R  +   LF ++  K   PN VT+  L+  +CR   +E A+++ E M+          
Sbjct: 263 AKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTL 322

Query: 333 ---------------------------GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMN 365
                                      G  P  ++Y ++L+ LC+  R  DA  LL EM 
Sbjct: 323 CNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMV 382

Query: 366 EKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMD 425
            K   P+ VT NT I   C+ G    A  +  +M E G  ++  TY AL++GFC    +D
Sbjct: 383 RKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVD 442

Query: 426 IAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
            A EL + M      P+  +Y+ L+ G CN    +A  +LL E + +    +V  +  L+
Sbjct: 443 SALELFYSM---PCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLV 499

Query: 486 RRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
             FC+K  +D A  L   M  +G   + + Y +L
Sbjct: 500 SFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTL 533



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 160/328 (48%), Gaps = 1/328 (0%)

Query: 215 DVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYN 274
           D+ +  +L+     +    D++    LI   C++G   +A  V    ER G + D+  YN
Sbjct: 58  DLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYN 117

Query: 275 SLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGV 334
           +L+ G+CR G++  ARRL   +  A P+  TYT +I G C    + EAL L + M  +G 
Sbjct: 118 TLVAGYCRYGQLDAARRLIASMPVA-PDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGC 176

Query: 335 YPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMK 394
            P VVTY  +L  +CK      A  +L+EM  K   P+ VT N +IN  C+ G    A +
Sbjct: 177 QPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARE 236

Query: 395 VKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYC 454
             NR+   G   D  +Y  ++ G C AK  +  +EL   M++    P+  ++  LV  +C
Sbjct: 237 FLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFC 296

Query: 455 NKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSV 514
                E  +++L++    G   + ++   +I   CK+ +VD A +  N M   G   D++
Sbjct: 297 RGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTI 356

Query: 515 IYTSLAYAYWRAGEPKACSDILDDMYRR 542
            YT++     RA   +   ++L +M R+
Sbjct: 357 SYTTVLKGLCRAERWEDAKELLKEMVRK 384


>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
 gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
          Length = 799

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 120/492 (24%), Positives = 223/492 (45%), Gaps = 22/492 (4%)

Query: 63  FFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKI 122
           F +  +  +P     + ++ T+I  L K + F  A+ + +++                 I
Sbjct: 222 FLEMIDRGIPP---DVVTYTTVIDGLCKAQLFDRAEGVFQQM-----------------I 261

Query: 123 HDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTD 182
            +    N++  + L+  Y ++   ++ +Q+ ++M    L P  +    LLN L K+    
Sbjct: 262 DNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCR 321

Query: 183 MVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLI 242
                +  M++ G+   +  Y +LIH       + ++   L  M    +  D   +N   
Sbjct: 322 EARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFF 381

Query: 243 ALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGAT 300
           + Y K GM  +A+ + ++M + G+SP++V Y +LI   C+ GR+ +A   F  +  +G T
Sbjct: 382 SAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVT 441

Query: 301 PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRL 360
           PN V + +L+ G C  +  E A  L   M  +G+ P  V +N+++  LC  GR+ +  RL
Sbjct: 442 PNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRL 501

Query: 361 LNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCK 420
           ++ M    + PD  +   LI+ YC  G T  A KV + M+  GL   + TY  L+HG+C 
Sbjct: 502 IDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCS 561

Query: 421 AKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSV 480
           A  +D A  L   ML  G +P   +Y+ ++ G           +L    ++ G   D+  
Sbjct: 562 ASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYT 621

Query: 481 YRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMY 540
           Y  ++   CK   VD A ++F  +   G+  + + +T +  A  + G  +   D+   + 
Sbjct: 622 YNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIP 681

Query: 541 RRRLMITLKIYR 552
              L+  +  YR
Sbjct: 682 ANGLVPNVVTYR 693



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 105/379 (27%), Positives = 177/379 (46%), Gaps = 4/379 (1%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
            +F +M    + P +   T +++ L K +L D    V+++M+  G   N + YN LIH  
Sbjct: 220 NLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGY 279

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
                  +V ++L EM  + ++ D +TY +L+   CK G   EA    D M R+GI P +
Sbjct: 280 LSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKV 339

Query: 271 VTYNSLIHGFCREGRMREARRLFRDI---KGATPNHVTYTTLIDGYCRANDLEEALRLRE 327
            TY  LIHG+  +G + E    F D+    G +P+H  +      Y +   +++A+ +  
Sbjct: 340 STYGILIHGYATKGALSEMHS-FLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFN 398

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
            M   G+ P VV Y +++  LCK GR+ DA    N+M  + + P+ V  N+L+   C + 
Sbjct: 399 KMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVD 458

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
               A ++   ML+ G+  +   +  LI   C    +   + L+  M   G  P   SY+
Sbjct: 459 KWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYT 518

Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGN 507
            L+ GYC     +   K+ D  VS GL      Y  L+  +C   ++D A  LF  M   
Sbjct: 519 PLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRK 578

Query: 508 GILGDSVIYTSLAYAYWRA 526
           G+    V Y ++ +  ++ 
Sbjct: 579 GVTPGVVTYNTILHGLFQT 597



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 112/412 (27%), Positives = 187/412 (45%), Gaps = 5/412 (1%)

Query: 162 MPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQ---LGVVANIHLYNVLIHACCKSSDVDK 218
           MP   + T+LL  L  ++  +   ++   M          N+  Y+++I+       VDK
Sbjct: 158 MPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVINGFFTEGQVDK 217

Query: 219 VEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIH 278
              L  EM  + +  D+ TY T+I   CK  +   A  V  +M   G  P+  TYN LIH
Sbjct: 218 PYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIH 277

Query: 279 GFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYP 336
           G+   G+ +E  ++  ++  +G  P+  TY +L++  C+     EA    + M  KG+ P
Sbjct: 278 GYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKP 337

Query: 337 GVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVK 396
            V TY  ++     +G + + +  L+ M E  ++PD+   N   +AY K G    AM + 
Sbjct: 338 KVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIF 397

Query: 397 NRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNK 456
           N+M + GL  +   Y ALI   CK   +D A+     M++ G +P+   ++ LV G C  
Sbjct: 398 NKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTV 457

Query: 457 NNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIY 516
           +  E   +L+ E + +G+C +   +  LI   C   +V   +RL +LM+  G+  D+  Y
Sbjct: 458 DKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSY 517

Query: 517 TSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLF 568
           T L   Y   G       + D M    L  T   Y +    Y   + I D +
Sbjct: 518 TPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAY 569



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 110/420 (26%), Positives = 192/420 (45%), Gaps = 12/420 (2%)

Query: 153 FDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCK 212
            D M  + L P  H   +  ++ AK  + D    ++ KM Q G+  N+  Y  LI A CK
Sbjct: 362 LDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCK 421

Query: 213 SSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVT 272
              VD  E    +M  + V  ++  +N+L+   C       A  +   M  +GI P+ V 
Sbjct: 422 LGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVF 481

Query: 273 YNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMA 330
           +N+LI   C  GR+ E RRL   ++  G  P+  +YT LI GYC     +EA ++ + M 
Sbjct: 482 FNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMV 541

Query: 331 AKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTA 390
           + G+ P  VTYN++L   C   RI DA  L  EM  K + P  VT NT+++   +    +
Sbjct: 542 SIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFS 601

Query: 391 SAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLV 450
            A ++   M+ +G   D +TY  +++G CK+  +D A ++   +   G   +  +++ ++
Sbjct: 602 EAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMI 661

Query: 451 DGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGIL 510
                   +E  + L     + GL  +V  YR +     ++  ++    LF+ M+ NG  
Sbjct: 662 GALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTA 721

Query: 511 GDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWS 570
            +S +  +L       G          D+ R    ++    R+FS   +  + ++ +F S
Sbjct: 722 PNSQMLNALVRRLLHRG----------DISRAGAYLSKLDERNFSVEASTTSLLMSIFTS 771



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 111/424 (26%), Positives = 183/424 (43%), Gaps = 39/424 (9%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           S L+ +V+    PD   H+ +     YA   M    + +F++MR H L P++     L++
Sbjct: 360 SFLDLMVENGLSPD--HHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALID 417

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
           +L K    D     + +M+  GV  NI ++N L++  C     ++ E+L+ EM  + +  
Sbjct: 418 ALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICP 477

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           +   +NTLI   C  G   E   + D ME  G+ PD  +Y  LI G+C  GR  EA ++F
Sbjct: 478 NAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVF 537

Query: 294 RDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSIL------ 345
             +   G +P  VTY TL+ GYC A+ +++A  L   M  KGV PGVVTYN+IL      
Sbjct: 538 DGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQT 597

Query: 346 -----------------------------RKLCKEGRIRDANRLLNEMNEKKIAPDNVTC 376
                                          LCK   + +A ++   +  K +  + +T 
Sbjct: 598 KRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITF 657

Query: 377 NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD 436
             +I A  K G    AM +   +   GL+ +  TY+ +     +   ++    L   M  
Sbjct: 658 TIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEK 717

Query: 437 AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDY 496
            G +P+    + LV    ++ +       L +   R   V+ S    L+  F   E   +
Sbjct: 718 NGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSLLMSIFTSDEYQHH 777

Query: 497 AQRL 500
           A+ L
Sbjct: 778 AKSL 781



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 100/376 (26%), Positives = 162/376 (43%), Gaps = 14/376 (3%)

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHA-----CCKSSD--VDKVEKLLCEMEFKDVRAD 234
           D   K++ +++     A++  +N L+ A     C  +S+  V    +++ E   K V  +
Sbjct: 31  DDALKLFDELLHHARPASVRAFNHLLTAVSRARCSSASELAVSHFNRMVRECSDK-VAPN 89

Query: 235 LFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR 294
           L TY+ LI  +C+ G      A    + + G   D +  N L+ G C   R+ EA  +  
Sbjct: 90  LCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAMDVLL 149

Query: 295 DIK---GATPNHVTYTTLIDGYCRANDLEEALRLREVMA---AKGVYPGVVTYNSILRKL 348
                 G  P+ V+YT L+ G C     EEAL L  +MA    +   P VV+Y+ ++   
Sbjct: 150 QRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVINGF 209

Query: 349 CKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ 408
             EG++     L  EM ++ I PD VT  T+I+  CK      A  V  +M++ G   + 
Sbjct: 210 FTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNN 269

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
           +TY  LIHG+    +     ++L  M   G  P   +Y  L++  C            D 
Sbjct: 270 YTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDS 329

Query: 469 FVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
            + +G+   VS Y  LI  +  K  +       +LM  NG+  D  I+     AY + G 
Sbjct: 330 MIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGM 389

Query: 529 PKACSDILDDMYRRRL 544
                DI + M +  L
Sbjct: 390 IDKAMDIFNKMRQHGL 405



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 78/314 (24%), Positives = 127/314 (40%), Gaps = 49/314 (15%)

Query: 315 RANDLEEALRLREVMAAKGVYPGVVTYNSIL----RKLCK---EGRIRDANRLLNEMNEK 367
           R+  L++AL+L + +        V  +N +L    R  C    E  +   NR++ E ++K
Sbjct: 26  RSLGLDDALKLFDELLHHARPASVRAFNHLLTAVSRARCSSASELAVSHFNRMVRECSDK 85

Query: 368 KIAPDNVTCNTLINAYCKIGD-----------------------------------TASA 392
            +AP+  T + LI  +C++G                                       A
Sbjct: 86  -VAPNLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEA 144

Query: 393 MKV-KNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD---AGFSPSYCSYSW 448
           M V   RM E G M D  +Y  L+ G C  K  + A ELL  M D       P+  SYS 
Sbjct: 145 MDVLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSI 204

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG 508
           +++G+  +   +    L  E + RG+  DV  Y  +I   CK +  D A+ +F  M  NG
Sbjct: 205 VINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNG 264

Query: 509 ILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD-- 566
              ++  Y  L + Y   G+ K    +L++M  R L      Y S      K+    +  
Sbjct: 265 FKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREAR 324

Query: 567 LFWSHVVDRGLMSK 580
            F+  ++ +G+  K
Sbjct: 325 FFFDSMIRKGIKPK 338


>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 794

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 109/377 (28%), Positives = 193/377 (51%), Gaps = 2/377 (0%)

Query: 171 LLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKD 230
           L+N + K   T    K+ +K+       N+ +Y+ +I A CK   V +   L  EM  K 
Sbjct: 418 LINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKG 477

Query: 231 VRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREAR 290
           + AD+ TY+TLI  +C  G   EA+ + + M  + I+PD+ TY  L+    +EG+++EA+
Sbjct: 478 ISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAK 537

Query: 291 RLFRDIKGA--TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
            +   +  A   P+  TY TL++GY    ++++A  +   M+  GV P V TY  ++   
Sbjct: 538 SVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGF 597

Query: 349 CKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ 408
           CK   + +A  L  EM++K + PD VT ++L++  CK G  +    + + M + G   D 
Sbjct: 598 CKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADV 657

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
            TY +LI G CK   +D A  L   M D G  P+  +++ L+DG C     +   ++  +
Sbjct: 658 ITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQD 717

Query: 469 FVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
            +++G  +DV +Y  +I   CK+  ++ A  + + M+ NG + ++V +  +  A ++  E
Sbjct: 718 LLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINALFKKDE 777

Query: 529 PKACSDILDDMYRRRLM 545
                 +L  M  R L+
Sbjct: 778 NDKAEKLLRQMIARGLL 794



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 133/476 (27%), Positives = 216/476 (45%), Gaps = 20/476 (4%)

Query: 78  LQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLV 137
           + S+  MI+   K K    A N+ +++ L  F   P ++    KI D             
Sbjct: 273 VHSYNIMINGFCKIKRVDKALNLFKEMILSRF---PPIIQ-FNKILDS------------ 316

Query: 138 IFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVV 197
             +A +K     + +  ++ +  + P L    +L+N           + V  K+++ G  
Sbjct: 317 --FAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYP 374

Query: 198 ANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAV 257
            +    N LI   C    V K      ++  +  + +  +Y TLI   CK G    A+ +
Sbjct: 375 PSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKL 434

Query: 258 QDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCR 315
             +++     P++  Y+++I   C+   + EA  LF +  +KG + + VTY+TLI G+C 
Sbjct: 435 LRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCI 494

Query: 316 ANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVT 375
              L+EA+ L   M  K + P V TY  ++  L KEG++++A  +L  M +  + PD  T
Sbjct: 495 VGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFT 554

Query: 376 CNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGML 435
            NTL+N Y  + +   A  V N M   G+  D  TY  LI+GFCK+K +D A  L   M 
Sbjct: 555 YNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMH 614

Query: 436 DAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVD 495
                P   +YS LVDG C       +  L+DE   RG   DV  Y +LI   CK   +D
Sbjct: 615 QKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLD 674

Query: 496 YAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIY 551
            A  LFN M+  GI  ++  +T L     + G  K   ++  D+  +   + + IY
Sbjct: 675 KAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIY 730



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 117/395 (29%), Positives = 192/395 (48%), Gaps = 5/395 (1%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
            VF+ M +  + P +H+  +++N   K +  D    ++K+M+ L     I  +N ++ + 
Sbjct: 259 HVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMI-LSRFPPIIQFNKILDSF 317

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
            K         L   +E K ++ DLFT N LI  +C  G      +V  ++ + G  P  
Sbjct: 318 AKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPST 377

Query: 271 VTYNSLIHGFCREGRMREARRLFRD---IKGATPNHVTYTTLIDGYCRANDLEEALRLRE 327
           VT N+LI G C +G++++A   F D    +G   N V+Y TLI+G C+  D   A++L  
Sbjct: 378 VTLNTLIKGLCLKGQVKKALH-FHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLR 436

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
            +  +   P V  Y++I+  LCK   + +A  L +EM  K I+ D VT +TLI  +C +G
Sbjct: 437 KIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVG 496

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
               A+ + N M+   +  D  TY  L+    K  ++  AK +L  ML A   P   +Y+
Sbjct: 497 KLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYN 556

Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGN 507
            L++GY      +    + +     G+  DV  Y  LI  FCK + VD A  LF  M   
Sbjct: 557 TLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQK 616

Query: 508 GILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRR 542
            ++ D+V Y+SL     ++G      D++D+M  R
Sbjct: 617 NMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDR 651



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 133/505 (26%), Positives = 224/505 (44%), Gaps = 45/505 (8%)

Query: 96  SAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQ 155
           S QN+ + ++L       SVL  ++K    PD  +  L+ L+         ++ L   D+
Sbjct: 38  SIQNVDDAVSL-------SVLTKILKRGYPPD--TVTLNTLIKGLCLKGQVKEALHFHDK 88

Query: 156 MRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSD 215
           +       +  +   L+N + +   T    K  +K+       N+ +YN +I A CK   
Sbjct: 89  LLAQGFQLNQVSYATLINGVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQL 148

Query: 216 VDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNS 275
           V +   L  EM  K + A++ TY+TLI  +C  G   EAL + + M  + I+P++ TYN 
Sbjct: 149 VSEAYGLFSEMTVKGISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNI 208

Query: 276 LIHGFCREGRMREARRLFRDIKGA--TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKG 333
           L+   C+EG+++EA+ +   +  A    N +TY+TL+DGY    ++++A  +   M+  G
Sbjct: 209 LVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMG 268

Query: 334 VYPGVVTYNSILRKLCKEGRIRDANRLLNEM----------------------------- 364
           V P V +YN ++   CK  R+  A  L  EM                             
Sbjct: 269 VTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPPIIQFNKILDSFAKMKHYSTAVS 328

Query: 365 -----NEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
                  K I PD  T N LIN +C +G       V  ++L+ G      T   LI G C
Sbjct: 329 LSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLC 388

Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
              ++  A      +L  GF  +  SY+ L++G C   +    +KLL +   R    +V 
Sbjct: 389 LKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVE 448

Query: 480 VYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
           +Y  +I   CK + V  A  LF+ M   GI  D V Y++L Y +   G+ K    +L++M
Sbjct: 449 MYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEM 508

Query: 540 YRRRLMITLKIYRSFSASYAKDNEI 564
             + +   ++ Y     +  K+ ++
Sbjct: 509 VLKTINPDVRTYTILVDALGKEGKV 533


>gi|255572834|ref|XP_002527349.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533268|gb|EEF35021.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 443

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 101/342 (29%), Positives = 179/342 (52%), Gaps = 2/342 (0%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           ++G +  + M     +P +  CT L+    K   T    ++ + +   G V ++  YNVL
Sbjct: 101 EEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGAVPDVITYNVL 160

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           I   C +      EKLL +M  +     + T+N LI   C+KG+   A+ V ++M + G 
Sbjct: 161 ISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPKHGC 220

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
           +P+ ++YN L+HGFC+E +M  A      +  +G  P+ VTY TL+   C+   ++ A+ 
Sbjct: 221 TPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVE 280

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           L   +++KG  P ++TYN+++  L K G+   A +LL+EM  K + PD +T ++L+    
Sbjct: 281 LLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLS 340

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           + G    A+K  + +   G+  +  TY A++ G CKA++ D A + L  M+  G  P+  
Sbjct: 341 REGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDRAIDFLAYMVQRGCKPTEA 400

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
           SY+ L++G   +   +  L+LL+E   RG+    S  +  +R
Sbjct: 401 SYTILIEGLAYEGLAKEALELLNELCLRGVVKKSSAEKVAVR 442



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 100/344 (29%), Positives = 168/344 (48%), Gaps = 2/344 (0%)

Query: 172 LNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDV 231
           L+ L ++   +  ++  + MV  G + +I     LI   CK     K  +++  +E    
Sbjct: 91  LSKLVRNGELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGA 150

Query: 232 RADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARR 291
             D+ TYN LI+  C  G   +A  +   M R G SP +VT+N LI+  CR+G +  A  
Sbjct: 151 VPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAID 210

Query: 292 LFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLC 349
           +   +   G TPN ++Y  L+ G+C+   +E A+     M ++G YP +VTYN++L  LC
Sbjct: 211 VLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALC 270

Query: 350 KEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQF 409
           K+G++  A  LLN+++ K  +P  +T NT+I+   K+G T  A K+ + M   GL  D  
Sbjct: 271 KDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDII 330

Query: 410 TYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEF 469
           TY +L+ G  +  ++D A +    +   G  P+  +Y+ ++ G C     +  +  L   
Sbjct: 331 TYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDRAIDFLAYM 390

Query: 470 VSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDS 513
           V RG     + Y  LI     +     A  L N +   G++  S
Sbjct: 391 VQRGCKPTEASYTILIEGLAYEGLAKEALELLNELCLRGVVKKS 434



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 99/348 (28%), Positives = 170/348 (48%), Gaps = 6/348 (1%)

Query: 247 KKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHV 304
           + G   E     + M   G  PDI+   SLI GFC+ G+ R+A R+   I+  GA P+ +
Sbjct: 96  RNGELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGAVPDVI 155

Query: 305 TYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM 364
           TY  LI G C      +A +L   M  +G  P VVT+N ++  LC++G +  A  +L +M
Sbjct: 156 TYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKM 215

Query: 365 NEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEM 424
            +    P++++ N L++ +CK      A++   +M   G   D  TY  L+   CK  ++
Sbjct: 216 PKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKV 275

Query: 425 DIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRAL 484
           D A ELL  +   G SP   +Y+ ++DG       +   KLLDE  ++GL  D+  Y +L
Sbjct: 276 DAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSL 335

Query: 485 IRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL 544
           +    ++ KVD A + F+ ++  G+  +++ Y ++     +A +     D L  M +R  
Sbjct: 336 VGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDRAIDFLAYMVQRGC 395

Query: 545 MITLKIYRSFSASYAKDN---EILDLFWSHVVDRGLMSKHIFKEMQLR 589
             T   Y       A +    E L+L  + +  RG++ K   +++ +R
Sbjct: 396 KPTEASYTILIEGLAYEGLAKEALELL-NELCLRGVVKKSSAEKVAVR 442



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 80/260 (30%), Positives = 130/260 (50%), Gaps = 2/260 (0%)

Query: 271 VTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
           +  N+ +    R G + E  R    +  +G  P+ +  T+LI G+C+     +A R+ E+
Sbjct: 85  IESNNNLSKLVRNGELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEI 144

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           +   G  P V+TYN ++  +C  GR  DA +LL +M  +  +P  VT N LIN  C+ G 
Sbjct: 145 IEDSGAVPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGL 204

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
              A+ V  +M + G   +  +Y  L+HGFCK K+M+ A E L  M   G  P   +Y+ 
Sbjct: 205 LGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNT 264

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG 508
           L+   C     +A ++LL++  S+G    +  Y  +I    K  K D A +L + M+  G
Sbjct: 265 LLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKG 324

Query: 509 ILGDSVIYTSLAYAYWRAGE 528
           +  D + Y+SL     R G+
Sbjct: 325 LKPDIITYSSLVGGLSREGK 344



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 72/231 (31%), Positives = 115/231 (49%), Gaps = 2/231 (0%)

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           L+ F     +    + V ++M  H   P+  +   LL+   K++  +   +   KM   G
Sbjct: 195 LINFLCRKGLLGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRG 254

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
              +I  YN L+ A CK   VD   +LL ++  K     L TYNT+I    K G   +A 
Sbjct: 255 CYPDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAA 314

Query: 256 AVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGY 313
            + D M  +G+ PDI+TY+SL+ G  REG++ EA + F D++  G  PN +TY  ++ G 
Sbjct: 315 KLLDEMRAKGLKPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGL 374

Query: 314 CRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM 364
           C+A   + A+     M  +G  P   +Y  ++  L  EG  ++A  LLNE+
Sbjct: 375 CKARKTDRAIDFLAYMVQRGCKPTEASYTILIEGLAYEGLAKEALELLNEL 425



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/193 (21%), Positives = 80/193 (41%)

Query: 372 DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
           + +  N  ++   + G+     +    M+  G + D     +LI GFCK  +   A  ++
Sbjct: 83  EEIESNNNLSKLVRNGELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIM 142

Query: 432 FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
             + D+G  P   +Y+ L+ G C+        KLL + V RG    V  +  LI   C+K
Sbjct: 143 EIIEDSGAVPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRK 202

Query: 492 EKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIY 551
             +  A  +   M  +G   +S+ Y  L + + +  + +   + L  M  R     +  Y
Sbjct: 203 GLLGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTY 262

Query: 552 RSFSASYAKDNEI 564
            +   +  KD ++
Sbjct: 263 NTLLTALCKDGKV 275



 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 48/210 (22%), Positives = 86/210 (40%), Gaps = 28/210 (13%)

Query: 80  SHWTMIHILTKNKHFKSAQNMLEKIALR----DFLSTPSVLNALVKIHDDPDG------- 128
           S+  ++H   K K  + A   L K+  R    D ++  ++L AL K     DG       
Sbjct: 226 SYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCK-----DGKVDAAVE 280

Query: 129 -----NSHVLSWLVIFY-------ANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLA 176
                +S   S ++I Y       + +  T    ++ D+MR   L P +   + L+  L+
Sbjct: 281 LLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLS 340

Query: 177 KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLF 236
           ++   D   K +  +  LGV  N   YN ++   CK+   D+    L  M  +  +    
Sbjct: 341 REGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDRAIDFLAYMVQRGCKPTEA 400

Query: 237 TYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           +Y  LI     +G+  EAL + + +   G+
Sbjct: 401 SYTILIEGLAYEGLAKEALELLNELCLRGV 430


>gi|357499781|ref|XP_003620179.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495194|gb|AES76397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 517

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 118/434 (27%), Positives = 214/434 (49%), Gaps = 22/434 (5%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D + +F+++   N  P       +L SL K +    V  + +KM   G+  N+   N+LI
Sbjct: 45  DAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILI 104

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYE----------ALAV 257
           ++ C+   +     +L ++     + +  T NTLI   C  G  ++          A+ +
Sbjct: 105 NSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAVDL 164

Query: 258 QDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCR 315
            ++M  E I+PD+ T+  L+ GFC+EGR++EA+ +     I+G  P  VTY +L+DGY  
Sbjct: 165 FNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFL 224

Query: 316 ANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVT 375
              + +A  +   MA  GV P + +Y+ ++   CK   + +A  LL EM+ K+I P+ VT
Sbjct: 225 VKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVT 284

Query: 376 CNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGML 435
            ++LI+  CK G  + A+K+ + M + G   +  TY +++   CK  ++D A  LL  M 
Sbjct: 285 YSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMK 344

Query: 436 DAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVD 495
           + G  P+  +Y+ L+ G C     E   K+ ++ + +G  ++V  Y  +I+ FC K   D
Sbjct: 345 NQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFD 404

Query: 496 YAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFS 555
            A  L + M+ NG + ++  Y  +  + ++  E +    +L +M          I  +F 
Sbjct: 405 EALTLLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKLLCEM----------IETNFD 454

Query: 556 ASYAKDNEILDLFW 569
              A  N+++   W
Sbjct: 455 GRVALTNDLIASIW 468



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 106/392 (27%), Positives = 203/392 (51%), Gaps = 14/392 (3%)

Query: 155 QMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSS 214
           +M    + P+L  C +L+NS  +       + V  K++++G   N    N LI   C + 
Sbjct: 87  KMEFRGIKPNLVNCNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNG 146

Query: 215 DV-----------DKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER 263
            +           D V+ L  +M  +++  D++T+  L+  +CK+G   EA  V   M  
Sbjct: 147 KIHDKHCIVGKLKDAVD-LFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMI 205

Query: 264 EGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEE 321
           +GI P +VTYNSL+ G+    ++ +A+ +F  +   G +P+  +Y+ LI+G+C+   ++E
Sbjct: 206 QGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDE 265

Query: 322 ALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
           A+ L + M  K + P VVTY+S++  LCK G+I  A +L++EM+++   P+ VT +++++
Sbjct: 266 AMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILD 325

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
           A CK     +A+ +  +M   G+  + +TY  LI G C++ +++ A+++   +L  G + 
Sbjct: 326 ALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNL 385

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
           +  +Y+ ++ G+C+K   +  L LL +    G   +   Y  +I    KK++ + A++L 
Sbjct: 386 NVYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKLL 445

Query: 502 NLMQGNGILGDSVIYTSLAYAYWRAGEPKACS 533
             M      G   +   L  + W  G     S
Sbjct: 446 CEMIETNFDGRVALTNDLIASIWVTGSSPGNS 477



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 71/308 (23%), Positives = 124/308 (40%), Gaps = 45/308 (14%)

Query: 302 NHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLL 361
           N + Y +    +   ND+++A+ L   +  +   P  + +N IL  L K         L 
Sbjct: 26  NFIPYFSTSTTFHNNNDVDDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLS 85

Query: 362 NEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAG------------------ 403
            +M  + I P+ V CN LIN++C++G   SA  V  ++L+ G                  
Sbjct: 86  QKMEFRGIKPNLVNCNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLN 145

Query: 404 ---------------------------LMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD 436
                                      +  D +T+  L+ GFCK   +  AK +L  M+ 
Sbjct: 146 GKIHDKHCIVGKLKDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMI 205

Query: 437 AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDY 496
            G  P   +Y+ L+DGY           + +     G+  D+  Y  LI  FCK + +D 
Sbjct: 206 QGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDE 265

Query: 497 AQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSA 556
           A  L   M    I+ + V Y+SL     ++G+      ++D+M+ R     +  Y S   
Sbjct: 266 AMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILD 325

Query: 557 SYAKDNEI 564
           +  K++++
Sbjct: 326 ALCKNHQV 333



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 107/214 (50%), Gaps = 4/214 (1%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           S+ N + ++   PD  S+  S L+  +  +KM  + +++  +M    ++P++   + L++
Sbjct: 233 SIFNTMAQLGVSPDIQSY--SILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLID 290

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
            L K        K+  +M   G   NI  Y+ ++ A CK+  VD    LL +M+ + ++ 
Sbjct: 291 GLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQP 350

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           +++TY  LI   C+ G   +A  V + +  +G + ++ TY  +I GFC +G   EA  L 
Sbjct: 351 NMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEALTLL 410

Query: 294 RDIK--GATPNHVTYTTLIDGYCRANDLEEALRL 325
             ++  G  PN  TY  +I    + ++ E A +L
Sbjct: 411 SKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKL 444


>gi|357160857|ref|XP_003578899.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Brachypodium distachyon]
          Length = 714

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 126/421 (29%), Positives = 189/421 (44%), Gaps = 8/421 (1%)

Query: 155 QMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSS 214
           + R    +P+     V++N LA+    +   ++   M +L   A+   YN LI       
Sbjct: 256 EARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIM-RLSKKASAFTYNPLITGLLARD 314

Query: 215 DVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYN 274
            V+K   LL EME + +   + TYNTLI    K G    A    D M  +G+ PD++TYN
Sbjct: 315 FVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYN 374

Query: 275 SLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAK 332
           SLI+G+C+ G +++A  LF D+K  G  P  +TY  LIDGYCR  DLE A RL+E M  +
Sbjct: 375 SLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEE 434

Query: 333 GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
              P V TY  ++   C    +       +EM  K + PD    NT I+A   IG   +A
Sbjct: 435 DCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNA 494

Query: 393 MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
            +++  M+  G+  D  TY  LI G CK   +  A  L   M+  G      +Y+ L+  
Sbjct: 495 FQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHA 554

Query: 453 YCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGD 512
           +C +        + D  V+ GL   V  Y   I  +C++  +  A   F  M   G+  +
Sbjct: 555 HCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPN 614

Query: 513 SVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHV 572
            V Y  L +A  R G  ++      +M  R L+     Y        K+       W H 
Sbjct: 615 EVTYNVLMHALCRMGRTESAYQHFHEMLERGLVPNKYTYTLLIDGSCKEGN-----WVHA 669

Query: 573 V 573
           +
Sbjct: 670 I 670



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 140/524 (26%), Positives = 227/524 (43%), Gaps = 57/524 (10%)

Query: 56  IPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNM-----------LEKI 104
           +P L+   F+WAE     +  S  +   ++  L +  H ++   +               
Sbjct: 76  LPGLARQLFRWAEGTPHGFPRSASAFAAVLFPLAEAGHNRAVYPVSLRALHLGLLLPLVS 135

Query: 105 ALRDFLSTPS---VLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNL 161
            +  +  +P+   +LN+L+++             +         +   L  F +M  H +
Sbjct: 136 LILTYPLSPTSHQLLNSLLRMSTKFSAECQAQKSVPA-----SCSTQCLSAFQEMARHGV 190

Query: 162 MPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEK 221
            P +  C  +L  L      D +  VY  M+QLGV  +I  YN L+ + CK+  +D+   
Sbjct: 191 APFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLLDSFCKAGRMDQAVA 250

Query: 222 LLCEMEFK-------DV-----------------------------RADLFTYNTLIALY 245
           LL +ME +       DV                             +A  FTYN LI   
Sbjct: 251 LLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIMRLSKKASAFTYNPLITGL 310

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNH 303
             +    +A A+   ME EGI P +VTYN+LI G  + G    A+  F ++  KG  P+ 
Sbjct: 311 LARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDL 370

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
           +TY +LI+GYC+A +L++AL L   +   G+ P V+TYN ++   C+ G +  A RL  E
Sbjct: 371 ITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEE 430

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
           M E+   PD  T   L+N  C + + A      + ML  GL  D F Y   I        
Sbjct: 431 MTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGA 490

Query: 424 MDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRA 483
           +  A +L   M+  G S    +Y+ L+DG C   + +    L  + V+ GL +D   Y  
Sbjct: 491 ITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTC 550

Query: 484 LIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
           LI   C++ ++  A+ +F+ M  +G+    V YT   + Y R G
Sbjct: 551 LIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRG 594



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 116/406 (28%), Positives = 182/406 (44%), Gaps = 38/406 (9%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           Q+ D MR+           ++   LA+D   +    +  +M   G+V  +  YN LI   
Sbjct: 287 QLVDIMRLSKKASAFTYNPLITGLLARD-FVEKAGALLLEMENEGIVPTVVTYNTLIDGL 345

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
            K+ + +  +    EM  K +  DL TYN+LI  YCK G   +AL +   ++R G+ P +
Sbjct: 346 FKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTV 405

Query: 271 VTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDL--------- 319
           +TYN LI G+CR G +  ARRL  ++  +   P+  TYT L++G C   +L         
Sbjct: 406 LTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDE 465

Query: 320 --------------------------EEALRLREVMAAKGVYPGVVTYNSILRKLCKEGR 353
                                       A +LRE M  +G+    VTYN ++  LCK G 
Sbjct: 466 MLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGS 525

Query: 354 IRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKA 413
           ++DA  L  +M    +  D VT   LI+A+C+ G    A  + + M+ +GL     TY  
Sbjct: 526 LKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTI 585

Query: 414 LIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
            IH +C+   + +A      ML+ G  P+  +Y+ L+   C     E+  +   E + RG
Sbjct: 586 FIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTESAYQHFHEMLERG 645

Query: 474 LCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
           L  +   Y  LI   CK+    +A RL+  M   GI  D   + +L
Sbjct: 646 LVPNKYTYTLLIDGSCKEGNWVHAIRLYCEMHQKGIHPDHCTHNAL 691



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 99/357 (27%), Positives = 165/357 (46%), Gaps = 2/357 (0%)

Query: 153 FDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCK 212
           FD+MR   L+P L     L+N   K         ++  + + G+   +  YN+LI   C+
Sbjct: 358 FDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCR 417

Query: 213 SSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVT 272
             D++   +L  EM  +D   D+ TY  L+   C            D M  +G+ PD   
Sbjct: 418 LGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFA 477

Query: 273 YNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEALRLREVMA 330
           YN+ I      G +  A +L  +  ++G + + VTY  LIDG C+   L++A  L   M 
Sbjct: 478 YNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMV 537

Query: 331 AKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTA 390
             G+    VTY  ++   C+ GR+ +A  + + M    ++P  VT    I+ YC+ G+  
Sbjct: 538 TDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLY 597

Query: 391 SAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLV 450
            A     +MLE G+  ++ TY  L+H  C+    + A +    ML+ G  P+  +Y+ L+
Sbjct: 598 LAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTESAYQHFHEMLERGLVPNKYTYTLLI 657

Query: 451 DGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGN 507
           DG C + N    ++L  E   +G+  D   + AL + F +    D  Q L N++ G 
Sbjct: 658 DGSCKEGNWVHAIRLYCEMHQKGIHPDHCTHNALFKGFGEGHMYDAVQYLENVVLGT 714



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 109/383 (28%), Positives = 176/383 (45%), Gaps = 24/383 (6%)

Query: 68  ESAVPNYKHSLQSHWTMIHILTKNKHFKSAQ----NMLEKIALRDFLSTPSVLNALVKIH 123
           E  VP    ++ ++ T+I  L K  + ++AQ     M  K  L D ++  S++N   K  
Sbjct: 329 EGIVP----TVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAG 384

Query: 124 DDPDG------------NSHVLSW--LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACT 169
           +                   VL++  L+  Y  L   +   ++ ++M   + +P +   T
Sbjct: 385 NLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYT 444

Query: 170 VLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFK 229
           +L+N     R   MV   + +M+  G+  +   YN  I A      +    +L  EM  +
Sbjct: 445 ILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLR 504

Query: 230 DVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA 289
            + +D  TYN LI   CK G   +A  +  +M  +G+  D VTY  LIH  C  GR+ EA
Sbjct: 505 GISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEA 564

Query: 290 RRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRK 347
           + +F  +   G +P+ VTYT  I  YCR  +L  A      M  +GV P  VTYN ++  
Sbjct: 565 KNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHA 624

Query: 348 LCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLD 407
           LC+ GR   A +  +EM E+ + P+  T   LI+  CK G+   A+++   M + G+  D
Sbjct: 625 LCRMGRTESAYQHFHEMLERGLVPNKYTYTLLIDGSCKEGNWVHAIRLYCEMHQKGIHPD 684

Query: 408 QFTYKALIHGFCKAKEMDIAKEL 430
             T+ AL  GF +    D  + L
Sbjct: 685 HCTHNALFKGFGEGHMYDAVQYL 707



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 67/234 (28%), Positives = 106/234 (45%), Gaps = 3/234 (1%)

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG- 387
           MA  GV P V   N +LR L    R  D   + ++M +  + P   T NTL++++CK G 
Sbjct: 185 MARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLLDSFCKAGR 244

Query: 388 -DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSY 446
            D A A+        AG + +  TY  +I+G  +  E++ A +L+  ++      S  +Y
Sbjct: 245 MDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLV-DIMRLSKKASAFTY 303

Query: 447 SWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQG 506
           + L+ G   ++  E    LL E  + G+   V  Y  LI    K    + AQ  F+ M+ 
Sbjct: 304 NPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEMRA 363

Query: 507 NGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAK 560
            G+L D + Y SL   Y +AG  K    +  D+ R  L  T+  Y      Y +
Sbjct: 364 KGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCR 417


>gi|413915825|gb|AFW21589.1| hypothetical protein ZEAMMB73_481763 [Zea mays]
 gi|413923991|gb|AFW63923.1| hypothetical protein ZEAMMB73_685382 [Zea mays]
          Length = 953

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 108/370 (29%), Positives = 186/370 (50%), Gaps = 2/370 (0%)

Query: 187 VYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYC 246
           V ++M   G+  ++  YN L+     S D D   ++   M+   V   + T+ TLI  YC
Sbjct: 211 VVERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAERMKADGVEPSVVTHTTLIGEYC 270

Query: 247 KKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHV 304
           K     EA  + + M R G+ PD+VT ++L+ G CR+GR  EA  LFR++   G  PNHV
Sbjct: 271 KMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEAYALFREMDKIGVAPNHV 330

Query: 305 TYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM 364
           TY T ID   +   + E+L L   M ++GV   +V Y +++ +L KEG+I +A  +L   
Sbjct: 331 TYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHA 390

Query: 365 NEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEM 424
               I P+ VT   L++A+C+ G+   A ++  +M E  +  +  T+ ++++G  K   +
Sbjct: 391 LSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCI 450

Query: 425 DIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRAL 484
             A   +  M D+G +P+  +Y  L+DG+     +EA L +  + +  G+  +  +  +L
Sbjct: 451 AKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSL 510

Query: 485 IRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL 544
           +    K   ++ A+ LF  M   G+L D V Y +L    ++ G   A   +  ++  R L
Sbjct: 511 VNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNL 570

Query: 545 MITLKIYRSF 554
                +Y  F
Sbjct: 571 SPDAVVYNVF 580



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 127/510 (24%), Positives = 231/510 (45%), Gaps = 61/510 (11%)

Query: 75  KHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALV-------------- 120
           + S+ +H T+I    K K  + A  + E +     L     L+ALV              
Sbjct: 256 EPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEAYA 315

Query: 121 ------KIHDDPDGNSHVLSWLVI-FYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
                 KI   P+   HV     I   A ++   + L +  +M    +   L   T +++
Sbjct: 316 LFREMDKIGVAPN---HVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMD 372

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
            L K+   +    V +  +   +  N   Y VL+ A C++ ++D  E++L +ME K V  
Sbjct: 373 RLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSP 432

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGF--C---------- 281
           ++ T+++++    K+G   +A     +M+  GI+P++VTY +LI GF  C          
Sbjct: 433 NVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVY 492

Query: 282 -----------------------REGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRA 316
                                  + G + EA  LF+D+  +G   +HV Y TL+DG  + 
Sbjct: 493 RDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKT 552

Query: 317 NDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTC 376
            ++  AL++ + +  + + P  V YN  +  LC+ G+  +A   L EM    + PD  T 
Sbjct: 553 GNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATY 612

Query: 377 NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD 436
           NT+I+A C+ G+T+ A+K+ N M  + +  +  TY  L+ G  +A  ++ AK LL  M  
Sbjct: 613 NTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMAS 672

Query: 437 AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDY 496
           AGF+P+  +Y  ++       +   +L++ +  +  GL  D++VY  L+   C       
Sbjct: 673 AGFTPTPLTYRRVLQACSGSRSPYVILEVHELMMGAGLHADITVYNTLVHVLCCHGMTRK 732

Query: 497 AQRLFNLMQGNGILGDSVIYTSLAYAYWRA 526
           A  + + M G GI  D++ + +L   + ++
Sbjct: 733 ATIVLDEMLGRGIAPDTITFNALILGHCKS 762



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 120/438 (27%), Positives = 206/438 (47%), Gaps = 14/438 (3%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           +V ++M+   + P +   T L+    K +  +  + +Y+ MV+ GV+ ++   + L+   
Sbjct: 245 EVAERMKADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGL 304

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           C+     +   L  EM+   V  +  TY T I    K     E+L +   M   G++ D+
Sbjct: 305 CRDGRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDL 364

Query: 271 VTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
           V Y +++    +EG++ EA+ + R       TPN VTYT L+D +CRA +++ A ++   
Sbjct: 365 VMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQ 424

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M  K V P VVT++SIL  L K G I  A   + +M +  IAP+ VT  TLI+ + K   
Sbjct: 425 MEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQG 484

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
             +A+ V   ML  G+  + F   +L++G  K   ++ A+ L   M + G    + +Y+ 
Sbjct: 485 QEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYAT 544

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG 508
           L+DG     N  A LK+  E + R L  D  VY   I   C+  K   A+     M+  G
Sbjct: 545 LMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTG 604

Query: 509 ILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLF 568
           +  D   Y ++  A  R G       +L++M    +   L  Y +          ++ L 
Sbjct: 605 LEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTL---------VVGLL 655

Query: 569 WSHVVDRGLMSKHIFKEM 586
            + VV++   +K++  EM
Sbjct: 656 EAGVVEK---AKYLLNEM 670



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 118/444 (26%), Positives = 208/444 (46%), Gaps = 4/444 (0%)

Query: 122 IHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLM-PHLHACTVLLNSLAKDRL 180
           +H+  + N+ ++  LV         ++   +F  M    L+  H++  T L++ L K   
Sbjct: 496 LHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYAT-LMDGLFKTGN 554

Query: 181 TDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNT 240
                KV +++++  +  +  +YNV I+  C+     + +  L EM    +  D  TYNT
Sbjct: 555 MPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNT 614

Query: 241 LIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--G 298
           +I+  C++G   +AL + + M+   I P+++TY +L+ G    G + +A+ L  ++   G
Sbjct: 615 MISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAG 674

Query: 299 ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDAN 358
            TP  +TY  ++     +      L + E+M   G++  +  YN+++  LC  G  R A 
Sbjct: 675 FTPTPLTYRRVLQACSGSRSPYVILEVHELMMGAGLHADITVYNTLVHVLCCHGMTRKAT 734

Query: 359 RLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGF 418
            +L+EM  + IAPD +T N LI  +CK     +A     +ML  GL  +  T+  L+ G 
Sbjct: 735 IVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGL 794

Query: 419 CKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDV 478
             A  +  A  ++  M   G  P+  +Y  LV GY  K+N+   L+L  E VS+G     
Sbjct: 795 ESAGRIGEADTVICEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKA 854

Query: 479 SVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDD 538
           S Y +LI  F K   ++ A+ LF+ M+  G+L  S  Y  L   + +         +L D
Sbjct: 855 STYNSLISDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGTEVRILLKD 914

Query: 539 MYRRRLMITLKIYRSFSASYAKDN 562
           M       +     S S +++K  
Sbjct: 915 MKELGFKPSKGTISSMSRAFSKPG 938



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 114/463 (24%), Positives = 202/463 (43%), Gaps = 62/463 (13%)

Query: 83  TMIHILTKNKHFKSAQ----NMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVI 138
           ++++ L KN + + A+    +M E+  L D ++  ++++ L K  + P            
Sbjct: 509 SLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMP------------ 556

Query: 139 FYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVA 198
             A LK+ Q+ ++        NL P      V +N L +           K+M   G+  
Sbjct: 557 --AALKVGQELME-------RNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEP 607

Query: 199 NIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGM-------- 250
           +   YN +I A C+  +  K  KLL EM++  ++ +L TY TL+    + G+        
Sbjct: 608 DQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLL 667

Query: 251 ---------------------------HYEALAVQDRMEREGISPDIVTYNSLIHGFCRE 283
                                       Y  L V + M   G+  DI  YN+L+H  C  
Sbjct: 668 NEMASAGFTPTPLTYRRVLQACSGSRSPYVILEVHELMMGAGLHADITVYNTLVHVLCCH 727

Query: 284 GRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTY 341
           G  R+A  +  ++  +G  P+ +T+  LI G+C+++ L+ A      M  +G+ P + T+
Sbjct: 728 GMTRKATIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIATF 787

Query: 342 NSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLE 401
           N++L  L   GRI +A+ ++ EM +  + P+N+T + L+  Y K  +   A+++   M+ 
Sbjct: 788 NTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVS 847

Query: 402 AGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEA 461
            G +    TY +LI  F KA  M+ AKEL   M   G   +  +Y  L++G+    N   
Sbjct: 848 KGFIPKASTYNSLISDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGTE 907

Query: 462 LLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
           +  LL +    G         ++ R F K      A+RL   +
Sbjct: 908 VRILLKDMKELGFKPSKGTISSMSRAFSKPGMTWEARRLLKTL 950



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 94/331 (28%), Positives = 147/331 (44%), Gaps = 8/331 (2%)

Query: 230 DVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA 289
            V AD  +YN  +A   ++G    A  V   M + G+  D VT ++ + G  R G + EA
Sbjct: 112 QVAADTVSYNIFLAGLSEQGHGRLAPPVLSEMCKRGVPWDGVTMSTALVGLSRTGLVGEA 171

Query: 290 RRLF------RDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNS 343
             L       R I G     V +  LIDGYC+  D+  AL + E M  +G+   VV YN+
Sbjct: 172 AALAEMLVRGRGIDGL--GVVGWNALIDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNT 229

Query: 344 ILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAG 403
           ++      G    A  +   M    + P  VT  TLI  YCK+     A  +   M+ +G
Sbjct: 230 LVAGFFYSGDADAAWEVAERMKADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSG 289

Query: 404 LMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALL 463
           ++ D  T  AL+ G C+      A  L   M   G +P++ +Y   +D           L
Sbjct: 290 VLPDVVTLSALVDGLCRDGRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESL 349

Query: 464 KLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAY 523
            LL E VSRG+ +D+ +Y  ++ R  K+ K++ A+ +      + I  + V YT L  A+
Sbjct: 350 GLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAH 409

Query: 524 WRAGEPKACSDILDDMYRRRLMITLKIYRSF 554
            RAG       +L  M  + +   +  + S 
Sbjct: 410 CRAGNIDGAEQMLLQMEEKSVSPNVVTFSSI 440



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 83/306 (27%), Positives = 129/306 (42%), Gaps = 8/306 (2%)

Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRDIKGATP----NHVTYTTLIDGYCRANDLEE 321
           +  D +T NS+I  +C    +R A  L R   G  P    + V+Y   + G         
Sbjct: 76  VPGDPLTLNSIILSYCSLHALRPALSLLRSSSGPQPQVAADTVSYNIFLAGLSEQGHGRL 135

Query: 322 ALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDN---VTCNT 378
           A  +   M  +GV    VT ++ L  L + G + +A  L  EM  +    D    V  N 
Sbjct: 136 APPVLSEMCKRGVPWDGVTMSTALVGLSRTGLVGEAAAL-AEMLVRGRGIDGLGVVGWNA 194

Query: 379 LINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAG 438
           LI+ YCK+ D A+A+ V  RM   GL LD   Y  L+ GF  + + D A E+   M   G
Sbjct: 195 LIDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAERMKADG 254

Query: 439 FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQ 498
             PS  +++ L+  YC     E    L +  V  G+  DV    AL+   C+  +   A 
Sbjct: 255 VEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEAY 314

Query: 499 RLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASY 558
            LF  M   G+  + V Y +   +  +         +L +M  R + + L +Y +     
Sbjct: 315 ALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRL 374

Query: 559 AKDNEI 564
            K+ +I
Sbjct: 375 GKEGKI 380


>gi|357498963|ref|XP_003619770.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494785|gb|AES75988.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 582

 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 115/381 (30%), Positives = 198/381 (51%), Gaps = 10/381 (2%)

Query: 171 LLNSLAK-DRLT---DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEM 226
           L+N L K  R+T    ++ +V  K+VQ     N  +YN++I   CK+  V+    L  +M
Sbjct: 181 LINGLCKVGRITAALQLLKRVDGKLVQ----PNAVMYNMIIDNMCKAKLVNDAFDLYSQM 236

Query: 227 EFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRM 286
             K +  D FT N+LI  +C  G   EA+ +  +M  E I+P + T++ L+  FC+EG++
Sbjct: 237 VAKRISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGKV 296

Query: 287 REARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSI 344
           +EA+ +      K    + VTY +L+DGYC   ++ +A  + + MA++GV   V +Y ++
Sbjct: 297 KEAKMMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTM 356

Query: 345 LRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGL 404
           +  LCK   + +A  L  EM  +KI P+ VT N+LI+   K+G  +  +K+ + M + G 
Sbjct: 357 INGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQ 416

Query: 405 MLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLK 464
             +  TY +++   CK   +D A  LL  + D G  P   +Y+ L+ G C     E   K
Sbjct: 417 PPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGLCQSGKLEDAQK 476

Query: 465 LLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYW 524
           + ++ + +G  +DV  Y  +I+ FC K   D A  L + M+ NG + ++  Y  +  + +
Sbjct: 477 VFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAALALLSKMEDNGCIPNAKTYEIVILSLF 536

Query: 525 RAGEPKACSDILDDMYRRRLM 545
              E      +L +M  R L+
Sbjct: 537 EKDENDMAEKLLREMIARGLL 557



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 100/371 (26%), Positives = 201/371 (54%), Gaps = 3/371 (0%)

Query: 149 GLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIH 208
            LQ+  ++    + P+     ++++++ K +L +  + +Y +MV   +  +    N LI+
Sbjct: 194 ALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFTCNSLIY 253

Query: 209 ACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISP 268
             C    + +   LL +M  +++   ++T++ L+  +CK+G   EA  +     ++ I  
Sbjct: 254 GFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAKMMLGVTMKKDIIL 313

Query: 269 DIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLR 326
           D+VTYNSL+ G+C    + +A+ +F  +  +G   N  +YTT+I+G C+   ++EA+ L 
Sbjct: 314 DVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVDEAVNLF 373

Query: 327 EVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKI 386
           E M  + + P VVTYNS++  L K G+I    +L++EM+++   P+ +T N++++A CK 
Sbjct: 374 EEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSILDALCKN 433

Query: 387 GDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSY 446
                A+ +   + + G+  D +TY  LI G C++ +++ A+++   +L  G++    +Y
Sbjct: 434 HHVDKAIALLTNLKDQGIRPDMYTYTVLIKGLCQSGKLEDAQKVFEDLLVKGYNLDVYTY 493

Query: 447 SWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQG 506
           + ++ G+C K   +A L LL +    G   +   Y  +I    +K++ D A++L   M  
Sbjct: 494 TVMIQGFCVKGLFDAALALLSKMEDNGCIPNAKTYEIVILSLFEKDENDMAEKLLREMIA 553

Query: 507 NGILGD-SVIY 516
            G+L + S IY
Sbjct: 554 RGLLDEKSYIY 564



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 112/418 (26%), Positives = 199/418 (47%), Gaps = 39/418 (9%)

Query: 160 NLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKV 219
           N  P +     +L+SL K +       ++++M   G+V++   +N+LI+ C     ++ +
Sbjct: 65  NPTPPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILIN-CFSQLGLNSL 123

Query: 220 E-KLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIH 278
              +  ++  K    +  T+NTLI   C KG  ++AL   D++  +G   D V+Y +LI+
Sbjct: 124 SFSVFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLIN 183

Query: 279 GFCREGRMREARRLFRDIKG--ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYP 336
           G C+ GR+  A +L + + G    PN V Y  +ID  C+A  + +A  L   M AK + P
Sbjct: 184 GLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISP 243

Query: 337 GVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVK 396
              T NS++   C  G++++A  LL++M  + I P   T + L++A+CK G    A  + 
Sbjct: 244 DDFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAKMML 303

Query: 397 NRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCN- 455
              ++  ++LD  TY +L+ G+C  KE++ AK++   M   G   +  SY+ +++G C  
Sbjct: 304 GVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKI 363

Query: 456 KNNEEA----------------------------------LLKLLDEFVSRGLCVDVSVY 481
           K  +EA                                  +LKL+DE   RG   ++  Y
Sbjct: 364 KMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQPPNIITY 423

Query: 482 RALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
            +++   CK   VD A  L   ++  GI  D   YT L     ++G+ +    + +D+
Sbjct: 424 NSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGLCQSGKLEDAQKVFEDL 481



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 89/338 (26%), Positives = 168/338 (49%), Gaps = 2/338 (0%)

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
           K+    +  +N +++   K   H  AL++  +ME  GI  D  T+N LI+ F + G    
Sbjct: 64  KNPTPPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFSQLGLNSL 123

Query: 289 ARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILR 346
           +  +F  I  KG  PN +T+ TLI G C    + +AL   + + A+G +   V+Y +++ 
Sbjct: 124 SFSVFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLIN 183

Query: 347 KLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLML 406
            LCK GRI  A +LL  ++ K + P+ V  N +I+  CK      A  + ++M+   +  
Sbjct: 184 GLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISP 243

Query: 407 DQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLL 466
           D FT  +LI+GFC   ++  A  LL  M+    +P   ++S LVD +C +   +    +L
Sbjct: 244 DDFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAKMML 303

Query: 467 DEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRA 526
              + + + +DV  Y +L+  +C  ++++ A+ +F+ M   G++ +   YT++     + 
Sbjct: 304 GVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKI 363

Query: 527 GEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
                  ++ ++M  R+++  +  Y S      K  +I
Sbjct: 364 KMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKI 401


>gi|110738150|dbj|BAF01006.1| hypothetical protein [Arabidopsis thaliana]
          Length = 642

 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 130/497 (26%), Positives = 231/497 (46%), Gaps = 22/497 (4%)

Query: 57  PSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVL 116
           P ++ +FF W+      Y H+L+ + +++ +L   K     + +  +I   +F  T S  
Sbjct: 114 PDIAWSFFCWSRKQ-KKYTHNLECYVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAA 172

Query: 117 NALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLA 176
           NAL+K                  +  L M ++ L V+ +M+ + + P L+    L+N L 
Sbjct: 173 NALIKS-----------------FGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLV 215

Query: 177 KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLF 236
                D   +V++ M    +  +I  YN +I   CK+    K  + L +ME +   AD  
Sbjct: 216 SAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKI 275

Query: 237 TYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI 296
           TY T+I            +A+   M+ +GI      ++ +I G C+EG++ E   +F ++
Sbjct: 276 TYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENM 335

Query: 297 --KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRI 354
             KG+ PN   YT LIDGY ++  +E+A+RL   M  +G  P VVTY+ ++  LCK GR+
Sbjct: 336 IRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRV 395

Query: 355 RDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKAL 414
            +A    +      +A +++  ++LI+   K G    A ++   M E G   D + Y AL
Sbjct: 396 EEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNAL 455

Query: 415 IHGFCKAKEMDIAKELLFGM-LDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
           I  F K +++D A  L   M  + G   +  +Y+ L+ G   ++  E  LKL D  + +G
Sbjct: 456 IDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKG 515

Query: 474 LCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACS 533
           +    + +RAL    C   KV  A ++ + +   G++ D+     +     +AG  K   
Sbjct: 516 ITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILDAAC-EDMINTLCKAGRIKEAC 574

Query: 534 DILDDMYRRRLMITLKI 550
            + D +  R   +  +I
Sbjct: 575 KLADGITERGREVPGRI 591



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 107/403 (26%), Positives = 181/403 (44%), Gaps = 7/403 (1%)

Query: 158 VHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVD 217
            HNL  ++    VL  +LAKD   D +  V  ++ +      +   N LI +  K   V+
Sbjct: 131 THNLECYVSLVDVL--ALAKD--VDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVE 186

Query: 218 KVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLI 277
           ++  +  +M+   +   L+TYN L+           A  V + ME   I PDIVTYN++I
Sbjct: 187 ELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMI 246

Query: 278 HGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVY 335
            G+C+ G+ ++A    RD+  +G   + +TY T+I      +D    + L + M  KG+ 
Sbjct: 247 KGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQ 306

Query: 336 PGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKV 395
                ++ ++  LCKEG++ +   +   M  K   P+      LI+ Y K G    A+++
Sbjct: 307 VPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRL 366

Query: 396 KNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCN 455
            +RM++ G   D  TY  +++G CK   ++ A +        G + +   YS L+DG   
Sbjct: 367 LHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGK 426

Query: 456 KNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSV- 514
               +   +L +E   +G   D   Y ALI  F K  KVD A  LF  M+       +V 
Sbjct: 427 AGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVY 486

Query: 515 IYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSAS 557
            YT L    ++    +    + D M  + +  T   +R+ S  
Sbjct: 487 TYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTG 529



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 77/312 (24%), Positives = 144/312 (46%), Gaps = 4/312 (1%)

Query: 131 HVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKK 190
           H  S ++          +G  VF+ M      P++   TVL++  AK    +   ++  +
Sbjct: 310 HAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHR 369

Query: 191 MVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGM 250
           M+  G   ++  Y+V+++  CK+  V++         F  +  +   Y++LI    K G 
Sbjct: 370 MIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGR 429

Query: 251 HYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI---KGATPNHVTYT 307
             EA  + + M  +G + D   YN+LI  F +  ++ EA  LF+ +   +G      TYT
Sbjct: 430 VDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYT 489

Query: 308 TLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEK 367
            L+ G  + +  EEAL+L ++M  KG+ P    + ++   LC  G++  A ++L+E+   
Sbjct: 490 ILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPM 549

Query: 368 KIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIA 427
            +  D   C  +IN  CK G    A K+ + + E G  +       +I+   K  + D+A
Sbjct: 550 GVILD-AACEDMINTLCKAGRIKEACKLADGITERGREVPGRIRTVMINALRKVGKADLA 608

Query: 428 KELLFGMLDAGF 439
            +L+   +  G+
Sbjct: 609 MKLMHSKIGIGY 620


>gi|15218855|ref|NP_171855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75180297|sp|Q9LR67.1|PPR9_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g03560, mitochondrial; Flags: Precursor
 gi|9280662|gb|AAF86531.1|AC002560_24 F21B7.18 [Arabidopsis thaliana]
 gi|332189465|gb|AEE27586.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 660

 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 130/497 (26%), Positives = 231/497 (46%), Gaps = 22/497 (4%)

Query: 57  PSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVL 116
           P ++ +FF W+      Y H+L+ + +++ +L   K     + +  +I   +F  T S  
Sbjct: 132 PDIAWSFFCWSRKQ-KKYTHNLECYVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAA 190

Query: 117 NALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLA 176
           NAL+K                  +  L M ++ L V+ +M+ + + P L+    L+N L 
Sbjct: 191 NALIKS-----------------FGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLV 233

Query: 177 KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLF 236
                D   +V++ M    +  +I  YN +I   CK+    K  + L +ME +   AD  
Sbjct: 234 SAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKI 293

Query: 237 TYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI 296
           TY T+I            +A+   M+ +GI      ++ +I G C+EG++ E   +F ++
Sbjct: 294 TYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENM 353

Query: 297 --KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRI 354
             KG+ PN   YT LIDGY ++  +E+A+RL   M  +G  P VVTY+ ++  LCK GR+
Sbjct: 354 IRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRV 413

Query: 355 RDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKAL 414
            +A    +      +A +++  ++LI+   K G    A ++   M E G   D + Y AL
Sbjct: 414 EEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNAL 473

Query: 415 IHGFCKAKEMDIAKELLFGM-LDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
           I  F K +++D A  L   M  + G   +  +Y+ L+ G   ++  E  LKL D  + +G
Sbjct: 474 IDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKG 533

Query: 474 LCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACS 533
           +    + +RAL    C   KV  A ++ + +   G++ D+     +     +AG  K   
Sbjct: 534 ITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILDAAC-EDMINTLCKAGRIKEAC 592

Query: 534 DILDDMYRRRLMITLKI 550
            + D +  R   +  +I
Sbjct: 593 KLADGITERGREVPGRI 609



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 107/403 (26%), Positives = 181/403 (44%), Gaps = 7/403 (1%)

Query: 158 VHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVD 217
            HNL  ++    VL  +LAKD   D +  V  ++ +      +   N LI +  K   V+
Sbjct: 149 THNLECYVSLVDVL--ALAKD--VDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVE 204

Query: 218 KVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLI 277
           ++  +  +M+   +   L+TYN L+           A  V + ME   I PDIVTYN++I
Sbjct: 205 ELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMI 264

Query: 278 HGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVY 335
            G+C+ G+ ++A    RD+  +G   + +TY T+I      +D    + L + M  KG+ 
Sbjct: 265 KGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQ 324

Query: 336 PGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKV 395
                ++ ++  LCKEG++ +   +   M  K   P+      LI+ Y K G    A+++
Sbjct: 325 VPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRL 384

Query: 396 KNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCN 455
            +RM++ G   D  TY  +++G CK   ++ A +        G + +   YS L+DG   
Sbjct: 385 LHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGK 444

Query: 456 KNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSV- 514
               +   +L +E   +G   D   Y ALI  F K  KVD A  LF  M+       +V 
Sbjct: 445 AGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVY 504

Query: 515 IYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSAS 557
            YT L    ++    +    + D M  + +  T   +R+ S  
Sbjct: 505 TYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTG 547



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 77/312 (24%), Positives = 144/312 (46%), Gaps = 4/312 (1%)

Query: 131 HVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKK 190
           H  S ++          +G  VF+ M      P++   TVL++  AK    +   ++  +
Sbjct: 328 HAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHR 387

Query: 191 MVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGM 250
           M+  G   ++  Y+V+++  CK+  V++         F  +  +   Y++LI    K G 
Sbjct: 388 MIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGR 447

Query: 251 HYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI---KGATPNHVTYT 307
             EA  + + M  +G + D   YN+LI  F +  ++ EA  LF+ +   +G      TYT
Sbjct: 448 VDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYT 507

Query: 308 TLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEK 367
            L+ G  + +  EEAL+L ++M  KG+ P    + ++   LC  G++  A ++L+E+   
Sbjct: 508 ILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPM 567

Query: 368 KIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIA 427
            +  D   C  +IN  CK G    A K+ + + E G  +       +I+   K  + D+A
Sbjct: 568 GVILD-AACEDMINTLCKAGRIKEACKLADGITERGREVPGRIRTVMINALRKVGKADLA 626

Query: 428 KELLFGMLDAGF 439
            +L+   +  G+
Sbjct: 627 MKLMHSKIGIGY 638


>gi|242054943|ref|XP_002456617.1| hypothetical protein SORBIDRAFT_03g039460 [Sorghum bicolor]
 gi|241928592|gb|EES01737.1| hypothetical protein SORBIDRAFT_03g039460 [Sorghum bicolor]
          Length = 410

 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 110/345 (31%), Positives = 174/345 (50%), Gaps = 2/345 (0%)

Query: 167 ACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEM 226
           ACT L++   +        +V+  M +LGV  N   Y  LIH        +    L+ EM
Sbjct: 40  ACTALVHGCCQSGDVAEARRVFDVMPRLGVTPNEVTYTALIHGYFVRGQREMGFALVGEM 99

Query: 227 EFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRM 286
               V  +L+TYN L+  +C+ G    A  + D M  +G+  ++V+YN LI G CR G++
Sbjct: 100 RRGGVEPNLYTYNCLVGEWCRTGEFKSARLLFDEMPLKGVVRNVVSYNILIAGLCRHGKL 159

Query: 287 REARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSI 344
           ++A +LF  ++  G  P+ VT+  LIDGY +A  +  AL     M A G+ P VVTYN +
Sbjct: 160 KDAAQLFEAMRREGIHPSMVTFNLLIDGYGKAGKMSNALHFFNQMKAAGLQPSVVTYNEL 219

Query: 345 LRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGL 404
           +   C+   I  A R  ++M E+++AP  VT   LI A+ K  +   A ++ + M +AGL
Sbjct: 220 IGGFCRARDIAHAIRAFSDMKERRLAPTKVTYTILIGAFAKENEMDRAFEMLSEMEKAGL 279

Query: 405 MLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLK 464
            +D  +Y  L+H  C   +M  A++L   M   G  P+   Y  ++ GY  + +    L+
Sbjct: 280 EVDVQSYGVLLHALCMEGKMMHARKLFQSMDSKGVKPNNVLYDMMIYGYGREGSSYKALR 339

Query: 465 LLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGI 509
           L+ E    GL  +V+ Y   IR  C + K   A+ L   M+  G+
Sbjct: 340 LIMEMRKSGLIPNVASYCLTIRLLCNEGKCQEAEALIGDMEDAGL 384



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 102/324 (31%), Positives = 165/324 (50%), Gaps = 2/324 (0%)

Query: 230 DVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA 289
           D   D+     L+   C+ G   EA  V D M R G++P+ VTY +LIHG+   G+    
Sbjct: 33  DAALDVAACTALVHGCCQSGDVAEARRVFDVMPRLGVTPNEVTYTALIHGYFVRGQREMG 92

Query: 290 RRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRK 347
             L  +++  G  PN  TY  L+  +CR  + + A  L + M  KGV   VV+YN ++  
Sbjct: 93  FALVGEMRRGGVEPNLYTYNCLVGEWCRTGEFKSARLLFDEMPLKGVVRNVVSYNILIAG 152

Query: 348 LCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLD 407
           LC+ G+++DA +L   M  + I P  VT N LI+ Y K G  ++A+   N+M  AGL   
Sbjct: 153 LCRHGKLKDAAQLFEAMRREGIHPSMVTFNLLIDGYGKAGKMSNALHFFNQMKAAGLQPS 212

Query: 408 QFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLD 467
             TY  LI GFC+A+++  A      M +   +P+  +Y+ L+  +  +N  +   ++L 
Sbjct: 213 VVTYNELIGGFCRARDIAHAIRAFSDMKERRLAPTKVTYTILIGAFAKENEMDRAFEMLS 272

Query: 468 EFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
           E    GL VDV  Y  L+   C + K+ +A++LF  M   G+  ++V+Y  + Y Y R G
Sbjct: 273 EMEKAGLEVDVQSYGVLLHALCMEGKMMHARKLFQSMDSKGVKPNNVLYDMMIYGYGREG 332

Query: 528 EPKACSDILDDMYRRRLMITLKIY 551
                  ++ +M +  L+  +  Y
Sbjct: 333 SSYKALRLIMEMRKSGLIPNVASY 356



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 106/351 (30%), Positives = 165/351 (47%), Gaps = 2/351 (0%)

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER 263
             L+H CC+S DV +  ++   M    V  +  TY  LI  Y  +G      A+   M R
Sbjct: 42  TALVHGCCQSGDVAEARRVFDVMPRLGVTPNEVTYTALIHGYFVRGQREMGFALVGEMRR 101

Query: 264 EGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEE 321
            G+ P++ TYN L+  +CR G  + AR LF +  +KG   N V+Y  LI G CR   L++
Sbjct: 102 GGVEPNLYTYNCLVGEWCRTGEFKSARLLFDEMPLKGVVRNVVSYNILIAGLCRHGKLKD 161

Query: 322 ALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
           A +L E M  +G++P +VT+N ++    K G++ +A    N+M    + P  VT N LI 
Sbjct: 162 AAQLFEAMRREGIHPSMVTFNLLIDGYGKAGKMSNALHFFNQMKAAGLQPSVVTYNELIG 221

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
            +C+  D A A++  + M E  L   + TY  LI  F K  EMD A E+L  M  AG   
Sbjct: 222 GFCRARDIAHAIRAFSDMKERRLAPTKVTYTILIGAFAKENEMDRAFEMLSEMEKAGLEV 281

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
              SY  L+   C +       KL     S+G+  +  +Y  +I  + ++     A RL 
Sbjct: 282 DVQSYGVLLHALCMEGKMMHARKLFQSMDSKGVKPNNVLYDMMIYGYGREGSSYKALRLI 341

Query: 502 NLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYR 552
             M+ +G++ +   Y          G+ +    ++ DM    L  +  I R
Sbjct: 342 MEMRKSGLIPNVASYCLTIRLLCNEGKCQEAEALIGDMEDAGLQTSESICR 392



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 98/337 (29%), Positives = 159/337 (47%), Gaps = 2/337 (0%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           +VFD M    + P+    T L++        +M + +  +M + GV  N++ YN L+   
Sbjct: 59  RVFDVMPRLGVTPNEVTYTALIHGYFVRGQREMGFALVGEMRRGGVEPNLYTYNCLVGEW 118

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           C++ +      L  EM  K V  ++ +YN LIA  C+ G   +A  + + M REGI P +
Sbjct: 119 CRTGEFKSARLLFDEMPLKGVVRNVVSYNILIAGLCRHGKLKDAAQLFEAMRREGIHPSM 178

Query: 271 VTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREV 328
           VT+N LI G+ + G+M  A   F  +K  G  P+ VTY  LI G+CRA D+  A+R    
Sbjct: 179 VTFNLLIDGYGKAGKMSNALHFFNQMKAAGLQPSVVTYNELIGGFCRARDIAHAIRAFSD 238

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M  + + P  VTY  ++    KE  +  A  +L+EM +  +  D  +   L++A C  G 
Sbjct: 239 MKERRLAPTKVTYTILIGAFAKENEMDRAFEMLSEMEKAGLEVDVQSYGVLLHALCMEGK 298

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
              A K+   M   G+  +   Y  +I+G+ +      A  L+  M  +G  P+  SY  
Sbjct: 299 MMHARKLFQSMDSKGVKPNNVLYDMMIYGYGREGSSYKALRLIMEMRKSGLIPNVASYCL 358

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
            +   CN+   +    L+ +    GL    S+ R L 
Sbjct: 359 TIRLLCNEGKCQEAEALIGDMEDAGLQTSESICRVLF 395



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 69/242 (28%), Positives = 117/242 (48%), Gaps = 2/242 (0%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           +D  Q+F+ MR   + P +    +L++   K          + +M   G+  ++  YN L
Sbjct: 160 KDAAQLFEAMRREGIHPSMVTFNLLIDGYGKAGKMSNALHFFNQMKAAGLQPSVVTYNEL 219

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           I   C++ D+    +   +M+ + +     TY  LI  + K+     A  +   ME+ G+
Sbjct: 220 IGGFCRARDIAHAIRAFSDMKERRLAPTKVTYTILIGAFAKENEMDRAFEMLSEMEKAGL 279

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFR--DIKGATPNHVTYTTLIDGYCRANDLEEALR 324
             D+ +Y  L+H  C EG+M  AR+LF+  D KG  PN+V Y  +I GY R     +ALR
Sbjct: 280 EVDVQSYGVLLHALCMEGKMMHARKLFQSMDSKGVKPNNVLYDMMIYGYGREGSSYKALR 339

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           L   M   G+ P V +Y   +R LC EG+ ++A  L+ +M +  +      C  L +A  
Sbjct: 340 LIMEMRKSGLIPNVASYCLTIRLLCNEGKCQEAEALIGDMEDAGLQTSESICRVLFDAKA 399

Query: 385 KI 386
           ++
Sbjct: 400 RL 401


>gi|300681581|emb|CBI75525.1| PPR repeat domain containing protein [Triticum aestivum]
          Length = 728

 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 113/451 (25%), Positives = 198/451 (43%), Gaps = 37/451 (8%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           ++  ++  +M V  + P+       L  L + +     W   + + Q G   N + +N +
Sbjct: 230 EEAQELLSEMEVEGVRPNAATYGTYLYGLCRAKQVKSAWNFLQMLCQRGYPCNSYCFNAV 289

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           IH  C    V K  ++   M+      D+ +Y+ L+   CK+G       +   M R GI
Sbjct: 290 IHGFCHDGQVHKAVEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGI 349

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDIKGA--------------------------- 299
           +P++V+Y+SL+HG CR GR+  A  LF+ +K                             
Sbjct: 350 TPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYD 409

Query: 300 ----------TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLC 349
                      P+   Y++LI  YCR   L+EAL + E+M   G+ P VVT   ++    
Sbjct: 410 LWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKEALEVFELMICDGICPNVVTCTILVHGFS 469

Query: 350 KEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQF 409
            EG I +A   L+++ +  + P+  T   +IN  CK+        +   M++ G + D  
Sbjct: 470 NEGLIGEAFLFLDKVRQFGVVPNLCTYRVIINGLCKVNKPNDVWGIFADMIKRGYVPDTV 529

Query: 410 TYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEF 469
            Y  +I GF KA ++  A  L + M+D G  P+  +Y+ L++G C+ +    ++ L    
Sbjct: 530 LYSIIIDGFVKALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHM 589

Query: 470 VSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEP 529
           +  GL  D  +Y +LI  +CK+  +  A  +F  M+  G+  DS +YT L   + +    
Sbjct: 590 IGEGLTPDRILYTSLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLAM 649

Query: 530 KACSDILDDMYRRRLMITLKIYRSFSASYAK 560
                 +++M  + L  T+  Y      Y K
Sbjct: 650 DGAQLFMEEMMNKGLTPTVVTYTDLIIGYFK 680



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 129/504 (25%), Positives = 228/504 (45%), Gaps = 30/504 (5%)

Query: 31  NPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTK 90
           +PNI S       + VL+++Y       L  A    +E  V   + +  ++ T ++ L +
Sbjct: 208 SPNIYS-------YSVLMSMYTHGAKLCLEEAQELLSEMEVEGVRPNAATYGTYLYGLCR 260

Query: 91  NKHFKSAQNMLEKIALRDFLSTPSVLNALVK--IHDDPDGNSHVLSWLVIFYANLKMTQD 148
            K  KSA N L+ +  R +       NA++    HD   G  H                 
Sbjct: 261 AKQVKSAWNFLQMLCQRGYPCNSYCFNAVIHGFCHD---GQVH----------------K 301

Query: 149 GLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIH 208
            ++VFD M+    +P +H+ ++L++ L K       + +  +M + G+  N+  Y+ L+H
Sbjct: 302 AVEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLH 361

Query: 209 ACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISP 268
             C++  V+   +L   ++ +  + D   Y+ ++   C+         + + M      P
Sbjct: 362 GLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVP 421

Query: 269 DIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLR 326
           D   Y+SLI+ +CR  +++EA  +F  +   G  PN VT T L+ G+     + EA    
Sbjct: 422 DAYNYSSLIYAYCRHRQLKEALEVFELMICDGICPNVVTCTILVHGFSNEGLIGEAFLFL 481

Query: 327 EVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKI 386
           + +   GV P + TY  I+  LCK  +  D   +  +M ++   PD V  + +I+ + K 
Sbjct: 482 DKVRQFGVVPNLCTYRVIINGLCKVNKPNDVWGIFADMIKRGYVPDTVLYSIIIDGFVKA 541

Query: 387 GDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSY 446
            D   A ++  +M++ G   + FTY +LI+G C   ++     L   M+  G +P    Y
Sbjct: 542 LDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLTPDRILY 601

Query: 447 SWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQG 506
           + L+  YC ++N +A L++  E  + GL  D  VY  LI  F K   +D AQ     M  
Sbjct: 602 TSLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQLFMEEMMN 661

Query: 507 NGILGDSVIYTSLAYAYWRAGEPK 530
            G+    V YT L   Y++ G+ K
Sbjct: 662 KGLTPTVVTYTDLIIGYFKIGDEK 685



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 89/402 (22%), Positives = 182/402 (45%), Gaps = 7/402 (1%)

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYC--KKGMHYE 253
           V   + + N L+    + + +  V  L  +M+      ++++Y+ L+++Y    K    E
Sbjct: 172 VGVELQVCNFLLKGLVEGNQIMYVRSLFDDMKISGPSPNIYSYSVLMSMYTHGAKLCLEE 231

Query: 254 ALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLID 311
           A  +   ME EG+ P+  TY + ++G CR  +++ A    + +  +G   N   +  +I 
Sbjct: 232 AQELLSEMEVEGVRPNAATYGTYLYGLCRAKQVKSAWNFLQMLCQRGYPCNSYCFNAVIH 291

Query: 312 GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAP 371
           G+C    + +A+ + + M   G  P V +Y+ ++  LCK+G +     +L EM    I P
Sbjct: 292 GFCHDGQVHKAVEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITP 351

Query: 372 DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
           + V+ ++L++  C+ G    A ++  R+ + G   D   Y  ++HG C+  +++I  +L 
Sbjct: 352 NLVSYSSLLHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLW 411

Query: 432 FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
             M+   F P   +YS L+  YC     +  L++ +  +  G+C +V     L+  F  +
Sbjct: 412 NDMVHHNFVPDAYNYSSLIYAYCRHRQLKEALEVFELMICDGICPNVVTCTILVHGFSNE 471

Query: 492 EKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIY 551
             +  A    + ++  G++ +   Y  +     +  +P     I  DM +R  +    +Y
Sbjct: 472 GLIGEAFLFLDKVRQFGVVPNLCTYRVIINGLCKVNKPNDVWGIFADMIKRGYVPDTVLY 531

Query: 552 RSFSASYAKDNEILDLF--WSHVVDRGLMSKHIFKEMQLRNS 591
                 + K  ++ + F  +  +VD G    +IF    L N 
Sbjct: 532 SIIIDGFVKALDLQEAFRLYYKMVDEG-TKPNIFTYTSLING 572


>gi|255581238|ref|XP_002531431.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223528950|gb|EEF30943.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 737

 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 123/509 (24%), Positives = 233/509 (45%), Gaps = 21/509 (4%)

Query: 63  FFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKI 122
           FF WA      Y+H    ++ M+ +L+K K  + A+ +               L     I
Sbjct: 122 FFYWAGRQW-RYRHDPIVYYMMLQVLSKTKLCQGARRV-------------LRLMVRRGI 167

Query: 123 HDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTD 182
              P+  +HV+    + Y+     ++ +QV   M+   + P+L  C   ++ L      +
Sbjct: 168 ARRPEAFAHVM----VSYSRAGKLRNAMQVLTMMQKAGVEPNLLICNTAIHVLVMANKLE 223

Query: 183 MVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLI 242
              +  ++M  +G+  N+  YN LI   C    V+   +L+ EM FK    D  +Y T++
Sbjct: 224 KALRFLERMQLVGITPNVVTYNCLIKGYCDLYQVEHAMELIAEMPFKGCPPDKVSYYTVM 283

Query: 243 ALYCKKGMHYEALAVQDRMEREG-ISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGA 299
              C+     E   + ++M ++  + PD VTYN+L+H   + G   EA    R+   +G 
Sbjct: 284 GFLCQDKRIKEVRNLMEKMVKDNKLFPDQVTYNTLVHMLSKHGHADEALEFLRETEERGF 343

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
             + V Y+ +++ +C    ++ A  +   M  KG  P VVTY +++  LCK G++ +A +
Sbjct: 344 QVDKVGYSAIVNSFCMQGRMDRAKEIVNEMITKGCSPDVVTYTAVVNGLCKVGKVEEAKK 403

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
           +L +M +    P+ V+   L+N  C+ G++  A ++ N   E     +  TY  ++HG  
Sbjct: 404 MLQQMYKHGCKPNTVSYTALLNGLCQHGNSLEAREMMNTSEEDWWTPNAITYSVVMHGLR 463

Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
           +  ++  A +++  ML  GF P+    + L+   C +       K ++E ++RG  V+  
Sbjct: 464 REGKLSEACDVVREMLTKGFFPTPVEINLLIKSLCLEQKMNEAKKFMEECLNRGCAVNAV 523

Query: 480 VYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
            +  +I  FC+ + +D A  L + M  N    D+V +T++  A  + G  +  +     M
Sbjct: 524 NFTTVIHGFCQSDNIDTALSLLDDMYLNNKHPDAVTFTAIIDALGKKGRIEEATVYTMKM 583

Query: 540 YRRRLMITLKIYRSFSASYAKDNEILDLF 568
            ++ L  T   YR+    Y K   + +L 
Sbjct: 584 LKKGLDPTPVTYRAVIHQYCKMGRVEELI 612



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 125/522 (23%), Positives = 227/522 (43%), Gaps = 29/522 (5%)

Query: 83  TMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVL--NALVKIHDDPDGNSHVLSWL---- 136
           T IH+L      + A   LE++ L     TP+V+  N L+K + D     H +  +    
Sbjct: 211 TAIHVLVMANKLEKALRFLERMQLVGI--TPNVVTYNCLIKGYCDLYQVEHAMELIAEMP 268

Query: 137 --------VIFYANL------KMTQDGLQVFDQMRVHN-LMPHLHACTVLLNSLAKDRLT 181
                   V +Y  +      K  ++   + ++M   N L P       L++ L+K    
Sbjct: 269 FKGCPPDKVSYYTVMGFLCQDKRIKEVRNLMEKMVKDNKLFPDQVTYNTLVHMLSKHGHA 328

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
           D   +  ++  + G   +   Y+ ++++ C    +D+ ++++ EM  K    D+ TY  +
Sbjct: 329 DEALEFLRETEERGFQVDKVGYSAIVNSFCMQGRMDRAKEIVNEMITKGCSPDVVTYTAV 388

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGA-- 299
           +   CK G   EA  +  +M + G  P+ V+Y +L++G C+ G   EAR +    +    
Sbjct: 389 VNGLCKVGKVEEAKKMLQQMYKHGCKPNTVSYTALLNGLCQHGNSLEAREMMNTSEEDWW 448

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
           TPN +TY+ ++ G  R   L EA  +   M  KG +P  V  N +++ LC E ++ +A +
Sbjct: 449 TPNAITYSVVMHGLRREGKLSEACDVVREMLTKGFFPTPVEINLLIKSLCLEQKMNEAKK 508

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
            + E   +  A + V   T+I+ +C+  +  +A+ + + M       D  T+ A+I    
Sbjct: 509 FMEECLNRGCAVNAVNFTTVIHGFCQSDNIDTALSLLDDMYLNNKHPDAVTFTAIIDALG 568

Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
           K   ++ A      ML  G  P+  +Y  ++  YC     E L+KLL + +SR  C   +
Sbjct: 569 KKGRIEEATVYTMKMLKKGLDPTPVTYRAVIHQYCKMGRVEELIKLLGKMLSRSKC--RT 626

Query: 480 VYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
            Y  +I + C     + A ++  L+       D+     L  +Y   G P +   +   M
Sbjct: 627 AYNQVIEKLCNFGNPEAADKVVGLVLRTASRIDANTCHMLMESYLSKGIPLSAYKVACRM 686

Query: 540 YRRRLMITLKIYRSFSASYAKDN--EILDLFWSHVVDRGLMS 579
           + R L+  LK+    S     +   E  D      V RG +S
Sbjct: 687 FDRNLIPDLKLCEKLSKKLVLEGKLEEADNLMLQFVQRGNIS 728


>gi|302826103|ref|XP_002994591.1| hypothetical protein SELMODRAFT_138844 [Selaginella moellendorffii]
 gi|300137362|gb|EFJ04342.1| hypothetical protein SELMODRAFT_138844 [Selaginella moellendorffii]
          Length = 599

 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 111/449 (24%), Positives = 213/449 (47%), Gaps = 4/449 (0%)

Query: 108 DFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHA 167
           D ++  +   A+   H  P  N H+ + L+  YA  +  +  +   ++M    +  +   
Sbjct: 32  DKVAARATFEAMRASHIKP--NVHIYTSLIHAYAEARDMEGAVACTEEMLSQGIQLNEAV 89

Query: 168 CTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEME 227
              +++  A     +     ++K     +V    +YN ++ A C++ +++ VE LL +ME
Sbjct: 90  FCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNMETVEALLAQME 149

Query: 228 FKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMR 287
            +  + +L  Y T++  + +     + L+   R++  G+SP   TY  ++  F + G M 
Sbjct: 150 EEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMA 209

Query: 288 EARRLFR--DIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSIL 345
           +A  +    D  G +PN + Y  ++DGY R  D   A ++ E M + G+ P +V YN ++
Sbjct: 210 KALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVIYNILV 269

Query: 346 RKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLM 405
              CK GR+  A  +L  +   ++ P   T  ++++ Y K G+   A++V +R+  AGL 
Sbjct: 270 HAFCKAGRMDKALGVLENIEANRLLPTIETYTSILDGYVKGGNIQKALEVFDRIKTAGLR 329

Query: 406 LDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKL 465
               +Y +L+ G  KA++M+ A+ +L  ML  G  P+  SY+ L +GY    + E    +
Sbjct: 330 PGVVSYNSLLSGLAKARQMENARLMLNEMLANGVVPNERSYTALTEGYARAGDVEKAFGM 389

Query: 466 LDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWR 525
                   L +D+  Y AL++  CK   +  A  +F  +   G+  + + Y ++   + R
Sbjct: 390 FQRMKKENLAIDIVAYGALLKACCKSGAMQRAAEVFQQITDAGLKHNRITYCTMLDGWAR 449

Query: 526 AGEPKACSDILDDMYRRRLMITLKIYRSF 554
            GE     D+L+DM +    +    Y SF
Sbjct: 450 KGELSKARDLLNDMQKHGFHLDTICYTSF 478



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 110/437 (25%), Positives = 202/437 (46%), Gaps = 19/437 (4%)

Query: 95  KSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFD 154
           ++A++  EK    + +    V N++V+ +    GN   +  L+      +M ++G Q   
Sbjct: 104 EAAEHWFEKFKAENLVPGGIVYNSIVQAYCQA-GNMETVEALLA-----QMEEEGFQ--- 154

Query: 155 QMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSS 214
                    +L   T +LN  A+ R  +     + ++   G+      Y  ++    K+ 
Sbjct: 155 --------GNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGCIVKLFTKAG 206

Query: 215 DVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYN 274
           ++ K   +L EM+   V  +   Y  ++  Y + G    A  V + M   G+ PDIV YN
Sbjct: 207 NMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVIYN 266

Query: 275 SLIHGFCREGRMREARRLFRDIKGAT--PNHVTYTTLIDGYCRANDLEEALRLREVMAAK 332
            L+H FC+ GRM +A  +  +I+     P   TYT+++DGY +  ++++AL + + +   
Sbjct: 267 ILVHAFCKAGRMDKALGVLENIEANRLLPTIETYTSILDGYVKGGNIQKALEVFDRIKTA 326

Query: 333 GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
           G+ PGVV+YNS+L  L K  ++ +A  +LNEM    + P+  +   L   Y + GD   A
Sbjct: 327 GLRPGVVSYNSLLSGLAKARQMENARLMLNEMLANGVVPNERSYTALTEGYARAGDVEKA 386

Query: 393 MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
             +  RM +  L +D   Y AL+   CK+  M  A E+   + DAG   +  +Y  ++DG
Sbjct: 387 FGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAAEVFQQITDAGLKHNRITYCTMLDG 446

Query: 453 YCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGD 512
           +  K        LL++    G  +D   Y + I+   +    +       +M+   +  +
Sbjct: 447 WARKGELSKARDLLNDMQKHGFHLDTICYTSFIKACFRSGDTEEVTETLAVMREKKLEVN 506

Query: 513 SVIYTSLAYAYWRAGEP 529
           +  YT+L + +  A +P
Sbjct: 507 ARTYTTLIHGWLAAADP 523



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 85/338 (25%), Positives = 175/338 (51%), Gaps = 2/338 (0%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           L + ++M  H + P+     ++++  A+       +KV++ MV  G+  +I +YN+L+HA
Sbjct: 212 LDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVIYNILVHA 271

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
            CK+  +DK   +L  +E   +   + TY +++  Y K G   +AL V DR++  G+ P 
Sbjct: 272 FCKAGRMDKALGVLENIEANRLLPTIETYTSILDGYVKGGNIQKALEVFDRIKTAGLRPG 331

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLRE 327
           +V+YNSL+ G  +  +M  AR +  ++   G  PN  +YT L +GY RA D+E+A  + +
Sbjct: 332 VVSYNSLLSGLAKARQMENARLMLNEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQ 391

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
            M  + +   +V Y ++L+  CK G ++ A  +  ++ +  +  + +T  T+++ + + G
Sbjct: 392 RMKKENLAIDIVAYGALLKACCKSGAMQRAAEVFQQITDAGLKHNRITYCTMLDGWARKG 451

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
           + + A  + N M + G  LD   Y + I    ++ + +   E L  M +     +  +Y+
Sbjct: 452 ELSKARDLLNDMQKHGFHLDTICYTSFIKACFRSGDTEEVTETLAVMREKKLEVNARTYT 511

Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
            L+ G+    + +  +   ++  + GL +D ++   L+
Sbjct: 512 TLIHGWLAAADPDQAISCYEQAKASGLQLDSALSNCLL 549



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 104/473 (21%), Positives = 219/473 (46%), Gaps = 14/473 (2%)

Query: 85  IHILTKNKH-FKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANL 143
           +HI T   H +  A++M   +A      T  +L+  +++      N  V   ++  YA+ 
Sbjct: 52  VHIYTSLIHAYAEARDMEGAVA-----CTEEMLSQGIQL------NEAVFCSIISGYASA 100

Query: 144 KMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLY 203
              +     F++ +  NL+P       ++ +  +    + V  +  +M + G   N+ LY
Sbjct: 101 GNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNMETVEALLAQMEEEGFQGNLGLY 160

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER 263
             +++   +  D +K       ++   +     TY  ++ L+ K G   +AL + + M++
Sbjct: 161 TTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEEMDK 220

Query: 264 EGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEE 321
            G+SP+ + Y  ++ G+ R G    A +++ D+   G  P+ V Y  L+  +C+A  +++
Sbjct: 221 HGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVIYNILVHAFCKAGRMDK 280

Query: 322 ALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
           AL + E + A  + P + TY SIL    K G I+ A  + + +    + P  V+ N+L++
Sbjct: 281 ALGVLENIEANRLLPTIETYTSILDGYVKGGNIQKALEVFDRIKTAGLRPGVVSYNSLLS 340

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
              K     +A  + N ML  G++ ++ +Y AL  G+ +A +++ A  +   M     + 
Sbjct: 341 GLAKARQMENARLMLNEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENLAI 400

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
              +Y  L+   C     +   ++  +    GL  +   Y  ++  + +K ++  A+ L 
Sbjct: 401 DIVAYGALLKACCKSGAMQRAAEVFQQITDAGLKHNRITYCTMLDGWARKGELSKARDLL 460

Query: 502 NLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSF 554
           N MQ +G   D++ YTS   A +R+G+ +  ++ L  M  ++L +  + Y + 
Sbjct: 461 NDMQKHGFHLDTICYTSFIKACFRSGDTEEVTETLAVMREKKLEVNARTYTTL 513



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 89/332 (26%), Positives = 150/332 (45%), Gaps = 2/332 (0%)

Query: 235 LFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR 294
           L  Y  L+  Y + G    A A  + M    I P++  Y SLIH +     M  A     
Sbjct: 17  LREYGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVACTE 76

Query: 295 DI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEG 352
           ++  +G   N   + ++I GY  A + E A    E   A+ + PG + YNSI++  C+ G
Sbjct: 77  EMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAG 136

Query: 353 RIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYK 412
            +     LL +M E+    +     T++N + +I D    +   +R+   GL     TY 
Sbjct: 137 NMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYG 196

Query: 413 ALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSR 472
            ++  F KA  M  A ++L  M   G SP+   Y+ ++DGY    +  A  K+ ++ VS 
Sbjct: 197 CIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSA 256

Query: 473 GLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKAC 532
           GL  D+ +Y  L+  FCK  ++D A  +   ++ N +L     YTS+   Y + G  +  
Sbjct: 257 GLKPDIVIYNILVHAFCKAGRMDKALGVLENIEANRLLPTIETYTSILDGYVKGGNIQKA 316

Query: 533 SDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
            ++ D +    L   +  Y S  +  AK  ++
Sbjct: 317 LEVFDRIKTAGLRPGVVSYNSLLSGLAKARQM 348



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 73/293 (24%), Positives = 125/293 (42%), Gaps = 27/293 (9%)

Query: 59  LSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLST----PS 114
            + AF  W +      K  +  +  ++H   K      A  +LE I     L T     S
Sbjct: 243 FTAAFKVWEDMVSAGLKPDIVIYNILVHAFCKAGRMDKALGVLENIEANRLLPTIETYTS 302

Query: 115 VLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNS 174
           +L+  VK      GN                 Q  L+VFD+++   L P + +   LL+ 
Sbjct: 303 ILDGYVK-----GGN----------------IQKALEVFDRIKTAGLRPGVVSYNSLLSG 341

Query: 175 LAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRAD 234
           LAK R  +    +  +M+  GVV N   Y  L     ++ DV+K   +   M+ +++  D
Sbjct: 342 LAKARQMENARLMLNEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENLAID 401

Query: 235 LFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR 294
           +  Y  L+   CK G    A  V  ++   G+  + +TY +++ G+ R+G + +AR L  
Sbjct: 402 IVAYGALLKACCKSGAMQRAAEVFQQITDAGLKHNRITYCTMLDGWARKGELSKARDLLN 461

Query: 295 DIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSIL 345
           D++  G   + + YT+ I    R+ D EE      VM  K +     TY +++
Sbjct: 462 DMQKHGFHLDTICYTSFIKACFRSGDTEEVTETLAVMREKKLEVNARTYTTLI 514



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/244 (20%), Positives = 95/244 (38%), Gaps = 2/244 (0%)

Query: 336 PGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKV 395
           P +  Y  ++    + G    A      M    I P+     +LI+AY +  D   A+  
Sbjct: 15  PVLREYGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVAC 74

Query: 396 KNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCN 455
              ML  G+ L++  + ++I G+  A   + A+            P    Y+ +V  YC 
Sbjct: 75  TEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQ 134

Query: 456 KNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVI 515
             N E +  LL +    G   ++ +Y  ++  F +    +     F+ ++  G+   +  
Sbjct: 135 AGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAAT 194

Query: 516 YTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLF--WSHVV 573
           Y  +   + +AG      DIL++M +  +     IY      YA+  +    F  W  +V
Sbjct: 195 YGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMV 254

Query: 574 DRGL 577
             GL
Sbjct: 255 SAGL 258


>gi|357122825|ref|XP_003563115.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Brachypodium distachyon]
          Length = 410

 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 105/315 (33%), Positives = 163/315 (51%), Gaps = 2/315 (0%)

Query: 230 DVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA 289
           D   D+     L+  YC+ G   EA  V D M R G++P+ VT+ +LIHG+   GR  + 
Sbjct: 33  DTTLDVAACTALVHGYCRSGDVAEAQRVFDVMPRLGLTPNEVTFTALIHGYFIHGRREKG 92

Query: 290 RRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRK 347
             LF    I G  PN  TY  L+  +CR  + E A  L E M AKG+   VV+YN+++  
Sbjct: 93  LALFEKMRIGGIEPNLYTYNILVGEWCRTGEFERARLLFEEMPAKGITRNVVSYNTLIAG 152

Query: 348 LCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLD 407
           LC+  +++DA +LL  M  + I P  VT N L++ Y K G  ++A+   N+M  AG    
Sbjct: 153 LCRYRKMKDATQLLELMRREGIRPSVVTFNLLVDGYGKAGKMSNALHFSNQMRMAGYQPS 212

Query: 408 QFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLD 467
             TY ALI GFC+A++M  A      M + G +P+  +Y+ L+D +  +N+ +   ++  
Sbjct: 213 AVTYNALIAGFCRARDMIRANRAFSDMKERGLAPTKVTYTILIDAFARENDMDKAFEMFA 272

Query: 468 EFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
                GL VDV  Y  L+   C +  +  A++LF  +   G+   +VIY  L Y Y R G
Sbjct: 273 GMEKAGLEVDVRTYGVLVHALCMEGNMKDARKLFQSIGEKGLQVGNVIYDMLIYGYGREG 332

Query: 528 EPKACSDILDDMYRR 542
                  ++ +M ++
Sbjct: 333 SSYKAMKLIMEMRKK 347



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 106/365 (29%), Positives = 174/365 (47%), Gaps = 2/365 (0%)

Query: 167 ACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEM 226
           ACT L++   +        +V+  M +LG+  N   +  LIH        +K   L  +M
Sbjct: 40  ACTALVHGYCRSGDVAEAQRVFDVMPRLGLTPNEVTFTALIHGYFIHGRREKGLALFEKM 99

Query: 227 EFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRM 286
               +  +L+TYN L+  +C+ G    A  + + M  +GI+ ++V+YN+LI G CR  +M
Sbjct: 100 RIGGIEPNLYTYNILVGEWCRTGEFERARLLFEEMPAKGITRNVVSYNTLIAGLCRYRKM 159

Query: 287 REARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSI 344
           ++A +L   ++  G  P+ VT+  L+DGY +A  +  AL     M   G  P  VTYN++
Sbjct: 160 KDATQLLELMRREGIRPSVVTFNLLVDGYGKAGKMSNALHFSNQMRMAGYQPSAVTYNAL 219

Query: 345 LRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGL 404
           +   C+   +  ANR  ++M E+ +AP  VT   LI+A+ +  D   A ++   M +AGL
Sbjct: 220 IAGFCRARDMIRANRAFSDMKERGLAPTKVTYTILIDAFARENDMDKAFEMFAGMEKAGL 279

Query: 405 MLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLK 464
            +D  TY  L+H  C    M  A++L   + + G       Y  L+ GY  + +    +K
Sbjct: 280 EVDVRTYGVLVHALCMEGNMKDARKLFQSIGEKGLQVGNVIYDMLIYGYGREGSSYKAMK 339

Query: 465 LLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYW 524
           L+ E   +G   + + Y   IR  C   K   A+ L + M   G+     +   L  A  
Sbjct: 340 LIMEMRKKGFVPNSASYGLTIRILCNDGKCSEAEALIDDMVRAGVQTSESVRQVLLNAKA 399

Query: 525 RAGEP 529
           R G P
Sbjct: 400 RQGSP 404



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 109/369 (29%), Positives = 174/369 (47%), Gaps = 2/369 (0%)

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER 263
             L+H  C+S DV + +++   M    +  +  T+  LI  Y   G   + LA+ ++M  
Sbjct: 42  TALVHGYCRSGDVAEAQRVFDVMPRLGLTPNEVTFTALIHGYFIHGRREKGLALFEKMRI 101

Query: 264 EGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEE 321
            GI P++ TYN L+  +CR G    AR LF ++  KG T N V+Y TLI G CR   +++
Sbjct: 102 GGIEPNLYTYNILVGEWCRTGEFERARLLFEEMPAKGITRNVVSYNTLIAGLCRYRKMKD 161

Query: 322 ALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
           A +L E+M  +G+ P VVT+N ++    K G++ +A    N+M      P  VT N LI 
Sbjct: 162 ATQLLELMRREGIRPSVVTFNLLVDGYGKAGKMSNALHFSNQMRMAGYQPSAVTYNALIA 221

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
            +C+  D   A +  + M E GL   + TY  LI  F +  +MD A E+  GM  AG   
Sbjct: 222 GFCRARDMIRANRAFSDMKERGLAPTKVTYTILIDAFARENDMDKAFEMFAGMEKAGLEV 281

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
              +Y  LV   C + N +   KL      +GL V   +Y  LI  + ++     A +L 
Sbjct: 282 DVRTYGVLVHALCMEGNMKDARKLFQSIGEKGLQVGNVIYDMLIYGYGREGSSYKAMKLI 341

Query: 502 NLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKD 561
             M+  G + +S  Y          G+      ++DDM R  +  +  + +    + A+ 
Sbjct: 342 MEMRKKGFVPNSASYGLTIRILCNDGKCSEAEALIDDMVRAGVQTSESVRQVLLNAKARQ 401

Query: 562 NEILDLFWS 570
               D F++
Sbjct: 402 GSPTDDFFT 410



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 100/337 (29%), Positives = 161/337 (47%), Gaps = 4/337 (1%)

Query: 108 DFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHA 167
           D      V + + ++   P  N    + L+  Y      + GL +F++MR+  + P+L+ 
Sbjct: 53  DVAEAQRVFDVMPRLGLTP--NEVTFTALIHGYFIHGRREKGLALFEKMRIGGIEPNLYT 110

Query: 168 CTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEME 227
             +L+    +    +    ++++M   G+  N+  YN LI   C+   +    +LL  M 
Sbjct: 111 YNILVGEWCRTGEFERARLLFEEMPAKGITRNVVSYNTLIAGLCRYRKMKDATQLLELMR 170

Query: 228 FKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMR 287
            + +R  + T+N L+  Y K G    AL   ++M   G  P  VTYN+LI GFCR   M 
Sbjct: 171 REGIRPSVVTFNLLVDGYGKAGKMSNALHFSNQMRMAGYQPSAVTYNALIAGFCRARDMI 230

Query: 288 EARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSIL 345
            A R F D+K  G  P  VTYT LID + R ND+++A  +   M   G+   V TY  ++
Sbjct: 231 RANRAFSDMKERGLAPTKVTYTILIDAFARENDMDKAFEMFAGMEKAGLEVDVRTYGVLV 290

Query: 346 RKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLM 405
             LC EG ++DA +L   + EK +   NV  + LI  Y + G +  AMK+   M + G +
Sbjct: 291 HALCMEGNMKDARKLFQSIGEKGLQVGNVIYDMLIYGYGREGSSYKAMKLIMEMRKKGFV 350

Query: 406 LDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
            +  +Y   I   C   +   A+ L+  M+ AG   S
Sbjct: 351 PNSASYGLTIRILCNDGKCSEAEALIDDMVRAGVQTS 387



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 77/283 (27%), Positives = 128/283 (45%), Gaps = 4/283 (1%)

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
           T L+ GYCR+ D+ EA R+ +VM   G+ P  VT+ +++      GR      L  +M  
Sbjct: 42  TALVHGYCRSGDVAEAQRVFDVMPRLGLTPNEVTFTALIHGYFIHGRREKGLALFEKMRI 101

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
             I P+  T N L+  +C+ G+   A  +   M   G+  +  +Y  LI G C+ ++M  
Sbjct: 102 GGIEPNLYTYNILVGEWCRTGEFERARLLFEEMPAKGITRNVVSYNTLIAGLCRYRKMKD 161

Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
           A +LL  M   G  PS  +++ LVDGY         L   ++    G       Y ALI 
Sbjct: 162 ATQLLELMRREGIRPSVVTFNLLVDGYGKAGKMSNALHFSNQMRMAGYQPSAVTYNALIA 221

Query: 487 RFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMI 546
            FC+   +  A R F+ M+  G+    V YT L  A+ R  +     ++   M +  L +
Sbjct: 222 GFCRARDMIRANRAFSDMKERGLAPTKVTYTILIDAFARENDMDKAFEMFAGMEKAGLEV 281

Query: 547 TLKIYRSFSASYAKDNEILD---LFWSHVVDRGLMSKHIFKEM 586
            ++ Y     +   +  + D   LF S + ++GL   ++  +M
Sbjct: 282 DVRTYGVLVHALCMEGNMKDARKLFQS-IGEKGLQVGNVIYDM 323



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 72/307 (23%), Positives = 120/307 (39%), Gaps = 23/307 (7%)

Query: 54  CHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTP 113
           C       A   + E        ++ S+ T+I  L + +  K A  +LE   +R     P
Sbjct: 119 CRTGEFERARLLFEEMPAKGITRNVVSYNTLIAGLCRYRKMKDATQLLE--LMRREGIRP 176

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           SV+                 + LV  Y       + L   +QMR+    P       L+ 
Sbjct: 177 SVVT---------------FNLLVDGYGKAGKMSNALHFSNQMRMAGYQPSAVTYNALIA 221

Query: 174 SLAKDRLTDMVW--KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDV 231
              + R  DM+   + +  M + G+      Y +LI A  + +D+DK  ++   ME   +
Sbjct: 222 GFCRAR--DMIRANRAFSDMKERGLAPTKVTYTILIDAFARENDMDKAFEMFAGMEKAGL 279

Query: 232 RADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARR 291
             D+ TY  L+   C +G   +A  +   +  +G+    V Y+ LI+G+ REG   +A +
Sbjct: 280 EVDVRTYGVLVHALCMEGNMKDARKLFQSIGEKGLQVGNVIYDMLIYGYGREGSSYKAMK 339

Query: 292 LFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLC 349
           L  ++  KG  PN  +Y   I   C      EA  L + M   GV         +L    
Sbjct: 340 LIMEMRKKGFVPNSASYGLTIRILCNDGKCSEAEALIDDMVRAGVQTSESVRQVLLNAKA 399

Query: 350 KEGRIRD 356
           ++G   D
Sbjct: 400 RQGSPTD 406



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 61/257 (23%), Positives = 111/257 (43%), Gaps = 7/257 (2%)

Query: 319 LEEALRLREVMA--AKGVYPGVVTYN-----SILRKLCKEGRIRDANRLLNEMNEKKIAP 371
           L  A  +R  +A  A+G   G  T +     +++   C+ G + +A R+ + M    + P
Sbjct: 12  LSAAGEVRSALALLARGAKAGDTTLDVAACTALVHGYCRSGDVAEAQRVFDVMPRLGLTP 71

Query: 372 DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
           + VT   LI+ Y   G     + +  +M   G+  + +TY  L+  +C+  E + A+ L 
Sbjct: 72  NEVTFTALIHGYFIHGRREKGLALFEKMRIGGIEPNLYTYNILVGEWCRTGEFERARLLF 131

Query: 432 FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
             M   G + +  SY+ L+ G C     +   +LL+     G+   V  +  L+  + K 
Sbjct: 132 EEMPAKGITRNVVSYNTLIAGLCRYRKMKDATQLLELMRREGIRPSVVTFNLLVDGYGKA 191

Query: 492 EKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIY 551
            K+  A    N M+  G    +V Y +L   + RA +    +    DM  R L  T   Y
Sbjct: 192 GKMSNALHFSNQMRMAGYQPSAVTYNALIAGFCRARDMIRANRAFSDMKERGLAPTKVTY 251

Query: 552 RSFSASYAKDNEILDLF 568
                ++A++N++   F
Sbjct: 252 TILIDAFARENDMDKAF 268


>gi|356519375|ref|XP_003528348.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 589

 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 128/464 (27%), Positives = 222/464 (47%), Gaps = 11/464 (2%)

Query: 67  AESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDP 126
           +E A  ++ H +     +++ L + K F     ++ K  ++ + +T S++  +  +   P
Sbjct: 51  SEEAALSFFHKM----VVMNPLPREKDFTKLFGIIVK--MKHYATTISLIKHIYSLGIKP 104

Query: 127 DGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWK 186
           D   + L+ ++    +L  T  G  V   M    + P +     L+N L  +       +
Sbjct: 105 D--VYTLTIIINCLCHLNHTVFGFSVLGVMFKIGVDPTVVTFATLINGLCAEGNVARAAR 162

Query: 187 VYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADL-FTYNTLIALY 245
               +  +G  +N + Y  +I+  CK+ D       L +++ ++   D+   Y+T++   
Sbjct: 163 FADSLEDMGHQSNSYTYGAIINGLCKAGDTSGAILYLEKIKGRNCDLDVVIAYSTIMDSL 222

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNH 303
           CK GM  EAL +   M  +GI PD+V YNSLIHG C  GR +EA  L  ++  KG  PN 
Sbjct: 223 CKDGMVCEALNLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMMRKGIMPNV 282

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
            T+  L+D +C+   +  A  +   M   GV P VVTYNS++   C   ++ DA ++   
Sbjct: 283 QTFNVLVDNFCKDGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQMGDAVKVFEL 342

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
           M  K   P+ VT ++LI+ +CK  +   A+ +   M+ +GL  D  T+  LI GFCKA +
Sbjct: 343 MIHKGFLPNLVTYSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWSTLIGGFCKAGK 402

Query: 424 MDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRA 483
            + AKEL   M +    P+  + + ++DG          + L  E     L ++V +Y  
Sbjct: 403 PEAAKELFCTMHEHDQHPNLQTCAIILDGLFKCQFHSEAISLFREMEKMNLELNVVIYNI 462

Query: 484 LIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
           ++   C   K++ AQ LF+ +   GI  D V YT++     + G
Sbjct: 463 VLDGMCSFGKLNDAQELFSCLPSKGIKIDVVAYTTMIKGLCKEG 506



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 112/367 (30%), Positives = 174/367 (47%), Gaps = 3/367 (0%)

Query: 142 NLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIH 201
           +LK  +  L  F +M V N +P     T L   + K +       + K +  LG+  +++
Sbjct: 48  DLKSEEAALSFFHKMVVMNPLPREKDFTKLFGIIVKMKHYATTISLIKHIYSLGIKPDVY 107

Query: 202 LYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRM 261
              ++I+  C  +       +L  M    V   + T+ TLI   C +G    A    D +
Sbjct: 108 TLTIIINCLCHLNHTVFGFSVLGVMFKIGVDPTVVTFATLINGLCAEGNVARAARFADSL 167

Query: 262 EREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGATPNH---VTYTTLIDGYCRAND 318
           E  G   +  TY ++I+G C+ G    A      IKG   +    + Y+T++D  C+   
Sbjct: 168 EDMGHQSNSYTYGAIINGLCKAGDTSGAILYLEKIKGRNCDLDVVIAYSTIMDSLCKDGM 227

Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT 378
           + EAL L   M +KG+ P +V YNS++  LC  GR ++A  LL  M  K I P+  T N 
Sbjct: 228 VCEALNLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMMRKGIMPNVQTFNV 287

Query: 379 LINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAG 438
           L++ +CK G  + A  +   M+  G+  D  TY ++I G C   +M  A ++   M+  G
Sbjct: 288 LVDNFCKDGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQMGDAVKVFELMIHKG 347

Query: 439 FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQ 498
           F P+  +YS L+ G+C   N    L LL E V+ GL  DV  +  LI  FCK  K + A+
Sbjct: 348 FLPNLVTYSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWSTLIGGFCKAGKPEAAK 407

Query: 499 RLFNLMQ 505
            LF  M 
Sbjct: 408 ELFCTMH 414



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 99/362 (27%), Positives = 175/362 (48%), Gaps = 3/362 (0%)

Query: 167 ACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEM 226
           A + +++SL KD +      ++  M   G+  ++  YN LIH  C      +   LL  M
Sbjct: 214 AYSTIMDSLCKDGMVCEALNLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNM 273

Query: 227 EFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRM 286
             K +  ++ T+N L+  +CK GM   A  +   M   G+ PD+VTYNS+I G C   +M
Sbjct: 274 MRKGIMPNVQTFNVLVDNFCKDGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQM 333

Query: 287 REARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSI 344
            +A ++F  +  KG  PN VTY++LI G+C+  ++ +AL L   M   G+ P VVT++++
Sbjct: 334 GDAVKVFELMIHKGFLPNLVTYSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWSTL 393

Query: 345 LRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGL 404
           +   CK G+   A  L   M+E    P+  TC  +++   K    + A+ +   M +  L
Sbjct: 394 IGGFCKAGKPEAAKELFCTMHEHDQHPNLQTCAIILDGLFKCQFHSEAISLFREMEKMNL 453

Query: 405 MLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLK 464
            L+   Y  ++ G C   +++ A+EL   +   G      +Y+ ++ G C +   +    
Sbjct: 454 ELNVVIYNIVLDGMCSFGKLNDAQELFSCLPSKGIKIDVVAYTTMIKGLCKEGLLDDAEN 513

Query: 465 LLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYW 524
           LL +    G   +   Y   +R   ++  +  + +   LM+G G+  D+   T L  +Y+
Sbjct: 514 LLMKMEENGCLPNEFTYNVFVRGLLQRYDISRSTKYLLLMKGKGLSADATT-TELLISYF 572

Query: 525 RA 526
            A
Sbjct: 573 SA 574



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 86/314 (27%), Positives = 156/314 (49%), Gaps = 3/314 (0%)

Query: 231 VRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREAR 290
           ++ D++T   +I   C         +V   M + G+ P +VT+ +LI+G C EG +  A 
Sbjct: 102 IKPDVYTLTIIINCLCHLNHTVFGFSVLGVMFKIGVDPTVVTFATLINGLCAEGNVARAA 161

Query: 291 RLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA-LRLREVMAAKGVYPGVVTYNSILRK 347
           R    ++  G   N  TY  +I+G C+A D   A L L ++         V+ Y++I+  
Sbjct: 162 RFADSLEDMGHQSNSYTYGAIINGLCKAGDTSGAILYLEKIKGRNCDLDVVIAYSTIMDS 221

Query: 348 LCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLD 407
           LCK+G + +A  L + M  K I PD V  N+LI+  C  G    A  +   M+  G+M +
Sbjct: 222 LCKDGMVCEALNLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMMRKGIMPN 281

Query: 408 QFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLD 467
             T+  L+  FCK   +  AK ++  M+  G  P   +Y+ ++ G+C  +     +K+ +
Sbjct: 282 VQTFNVLVDNFCKDGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQMGDAVKVFE 341

Query: 468 EFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
             + +G   ++  Y +LI  +CK + ++ A  L   M  +G+  D V +++L   + +AG
Sbjct: 342 LMIHKGFLPNLVTYSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWSTLIGGFCKAG 401

Query: 528 EPKACSDILDDMYR 541
           +P+A  ++   M+ 
Sbjct: 402 KPEAAKELFCTMHE 415



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 91/331 (27%), Positives = 150/331 (45%), Gaps = 2/331 (0%)

Query: 142 NLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIH 201
           N    ++   +   M    +MP++    VL+++  KD +      +   MV +GV  ++ 
Sbjct: 259 NFGRWKEATTLLGNMMRKGIMPNVQTFNVLVDNFCKDGMISRAKTIMGFMVHVGVEPDVV 318

Query: 202 LYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRM 261
            YN +I   C  S +    K+   M  K    +L TY++LI  +CK     +AL +   M
Sbjct: 319 TYNSVISGHCLLSQMGDAVKVFELMIHKGFLPNLVTYSSLIHGWCKTKNINKALFLLGEM 378

Query: 262 EREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDL 319
              G++PD+VT+++LI GFC+ G+   A+ LF  +      PN  T   ++DG  +    
Sbjct: 379 VNSGLNPDVVTWSTLIGGFCKAGKPEAAKELFCTMHEHDQHPNLQTCAIILDGLFKCQFH 438

Query: 320 EEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTL 379
            EA+ L   M    +   VV YN +L  +C  G++ DA  L + +  K I  D V   T+
Sbjct: 439 SEAISLFREMEKMNLELNVVIYNIVLDGMCSFGKLNDAQELFSCLPSKGIKIDVVAYTTM 498

Query: 380 INAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGF 439
           I   CK G    A  +  +M E G + ++FTY   + G  +  ++  + + L  M   G 
Sbjct: 499 IKGLCKEGLLDDAENLLMKMEENGCLPNEFTYNVFVRGLLQRYDISRSTKYLLLMKGKGL 558

Query: 440 SPSYCSYSWLVDGYCNKNNEEALLKLLDEFV 470
           S    +   L+  +       AL   L EFV
Sbjct: 559 SADATTTELLISYFSANKENSALHVFLQEFV 589



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/271 (25%), Positives = 115/271 (42%), Gaps = 7/271 (2%)

Query: 298 GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDA 357
           G  P+  T T +I+  C  N       +  VM   GV P VVT+ +++  LC EG +  A
Sbjct: 101 GIKPDVYTLTIIINCLCHLNHTVFGFSVLGVMFKIGVDPTVVTFATLINGLCAEGNVARA 160

Query: 358 NRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAM----KVKNRMLEAGLMLDQFTYKA 413
            R  + + +     ++ T   +IN  CK GDT+ A+    K+K R  +  +++    Y  
Sbjct: 161 ARFADSLEDMGHQSNSYTYGAIINGLCKAGDTSGAILYLEKIKGRNCDLDVVI---AYST 217

Query: 414 LIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
           ++   CK   +  A  L  GM   G  P   +Y+ L+ G CN    +    LL   + +G
Sbjct: 218 IMDSLCKDGMVCEALNLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMMRKG 277

Query: 474 LCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACS 533
           +  +V  +  L+  FCK   +  A+ +   M   G+  D V Y S+   +    +     
Sbjct: 278 IMPNVQTFNVLVDNFCKDGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQMGDAV 337

Query: 534 DILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
            + + M  +  +  L  Y S    + K   I
Sbjct: 338 KVFELMIHKGFLPNLVTYSSLIHGWCKTKNI 368



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 57/246 (23%), Positives = 95/246 (38%), Gaps = 1/246 (0%)

Query: 320 EEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTL 379
           E AL     M      P    +  +   + K         L+  +    I PD  T   +
Sbjct: 53  EAALSFFHKMVVMNPLPREKDFTKLFGIIVKMKHYATTISLIKHIYSLGIKPDVYTLTII 112

Query: 380 INAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGF 439
           IN  C +  T     V   M + G+     T+  LI+G C    +  A      + D G 
Sbjct: 113 INCLCHLNHTVFGFSVLGVMFKIGVDPTVVTFATLINGLCAEGNVARAARFADSLEDMGH 172

Query: 440 SPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSV-YRALIRRFCKKEKVDYAQ 498
             +  +Y  +++G C   +    +  L++   R   +DV + Y  ++   CK   V  A 
Sbjct: 173 QSNSYTYGAIINGLCKAGDTSGAILYLEKIKGRNCDLDVVIAYSTIMDSLCKDGMVCEAL 232

Query: 499 RLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASY 558
            LF+ M   GI  D V Y SL +     G  K  + +L +M R+ +M  ++ +     ++
Sbjct: 233 NLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMMRKGIMPNVQTFNVLVDNF 292

Query: 559 AKDNEI 564
            KD  I
Sbjct: 293 CKDGMI 298



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 46/200 (23%), Positives = 94/200 (47%), Gaps = 3/200 (1%)

Query: 129 NSHVLSW--LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWK 186
           N  V++W  L+  +      +   ++F  M  H+  P+L  C ++L+ L K +       
Sbjct: 384 NPDVVTWSTLIGGFCKAGKPEAAKELFCTMHEHDQHPNLQTCAIILDGLFKCQFHSEAIS 443

Query: 187 VYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYC 246
           ++++M ++ +  N+ +YN+++   C    ++  ++L   +  K ++ D+  Y T+I   C
Sbjct: 444 LFREMEKMNLELNVVIYNIVLDGMCSFGKLNDAQELFSCLPSKGIKIDVVAYTTMIKGLC 503

Query: 247 KKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKG-ATPNHVT 305
           K+G+  +A  +  +ME  G  P+  TYN  + G  +   +  + +    +KG       T
Sbjct: 504 KEGLLDDAENLLMKMEENGCLPNEFTYNVFVRGLLQRYDISRSTKYLLLMKGKGLSADAT 563

Query: 306 YTTLIDGYCRANDLEEALRL 325
            T L+  Y  AN    AL +
Sbjct: 564 TTELLISYFSANKENSALHV 583


>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
 gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
          Length = 457

 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 119/461 (25%), Positives = 211/461 (45%), Gaps = 48/461 (10%)

Query: 70  AVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGN 129
           A    + ++ S+  ++  L K + +  A+ ++  +  R   STP ++             
Sbjct: 37  AARGIQPNVVSYNGLLEGLCKLERWHEAEELVRDMISRGGRSTPDLVT------------ 84

Query: 130 SHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYK 189
               S L+  Y      ++  ++  ++    L P     T ++ SL K        ++ +
Sbjct: 85  ---YSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMASLCKSARLGEALELLE 141

Query: 190 KMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKG 249
           +M++ G    +  +N LI  CC+  +++  + LL  M    V+AD+ TYNTL+   CK G
Sbjct: 142 EMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKADVVTYNTLMDGLCKAG 201

Query: 250 MHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGA--TPNHVTYT 307
              EA  + +RM+  G +PD+V Y+S ++G C+ G++  A ++   ++ +   PN VTY 
Sbjct: 202 RLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYN 261

Query: 308 TLIDGYCRANDLEEALRLREVMAAK-GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
           T++DG C++  ++ AL + E MA+  G    VV Y++++  LCK GR ++A  ++  M  
Sbjct: 262 TILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMAR 321

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
               PD VT ++L+N  CK G    A++    M   G   +  TY +L+HG C    +  
Sbjct: 322 AGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAE 381

Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
           A+ ++  M   G    +C  S                              VS Y ALI 
Sbjct: 382 AERMVEEMSSGGGGGDHCPPS------------------------------VSTYNALIG 411

Query: 487 RFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
             CK  ++D A + F  M+  G   D V Y+++     R+G
Sbjct: 412 GLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSG 452



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 110/375 (29%), Positives = 183/375 (48%), Gaps = 5/375 (1%)

Query: 170 VLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFK 229
            L+N  +K        ++ + M   G+  N+  YN L+   CK     + E+L+ +M  +
Sbjct: 15  ALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWHEAEELVRDMISR 74

Query: 230 DVRA--DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMR 287
             R+  DL TY+TL++ YCK G   E+  +   +   G+ PD + Y  ++   C+  R+ 
Sbjct: 75  GGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMASLCKSARLG 134

Query: 288 EARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSIL 345
           EA  L  ++   G  P  +T+ TLI G CR  +LE A  L + MAA GV   VVTYN+++
Sbjct: 135 EALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKADVVTYNTLM 194

Query: 346 RKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLM 405
             LCK GR+++A +LL  M     APD V  ++ +   CK G   +A +V  +M ++   
Sbjct: 195 DGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHD 254

Query: 406 LDQFTYKALIHGFCKAKEMDIAKELLFGMLDA-GFSPSYCSYSWLVDGYCNKNNEEALLK 464
            +  TY  ++ G CK+ ++D A E++  M  + G   +   YS +VDG C     +    
Sbjct: 255 PNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARS 314

Query: 465 LLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYW 524
           +++     G   DV  Y +L+   CK  K++ A      M   G   ++V Y SL +   
Sbjct: 315 VMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLC 374

Query: 525 RAGEPKACSDILDDM 539
             G       ++++M
Sbjct: 375 SCGRLAEAERMVEEM 389



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 94/333 (28%), Positives = 161/333 (48%), Gaps = 40/333 (12%)

Query: 236 FTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD 295
            T+N L+  + K+G   +   + + M   GI P++V+YN L+ G C+  R  EA  L RD
Sbjct: 11  VTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWHEAEELVRD 70

Query: 296 I--KG--ATPNHVTYTTLIDGYCRANDLEE----------------ALRLREVMAA---- 331
           +  +G  +TP+ VTY+TL+ GYC+A  +EE                AL   +VMA+    
Sbjct: 71  MISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMASLCKS 130

Query: 332 ---------------KGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTC 376
                           G  P ++T+N+++   C+E  +  A+ LL  M    +  D VT 
Sbjct: 131 ARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKADVVTY 190

Query: 377 NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD 436
           NTL++  CK G    A ++  RM  +G   D   Y + ++G CK+ ++  A ++L  M D
Sbjct: 191 NTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRD 250

Query: 437 AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLC-VDVSVYRALIRRFCKKEKVD 495
           +   P+  +Y+ ++DG C     +  L+++++  S   C ++V  Y  ++   CK  +  
Sbjct: 251 SDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQ 310

Query: 496 YAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
            A+ +   M   G   D V Y+SL     +AG+
Sbjct: 311 EARSVMEAMARAGCRPDVVTYSSLVNGLCKAGK 343



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 78/247 (31%), Positives = 127/247 (51%), Gaps = 2/247 (0%)

Query: 295 DIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRI 354
           D  G  PN VT+  L++G+ +     +  RL E MAA+G+ P VV+YN +L  LCK  R 
Sbjct: 2   DRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERW 61

Query: 355 RDANRLLNEMNEK--KIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYK 412
            +A  L+ +M  +  +  PD VT +TL++ YCK G    + ++   ++  GL  D   Y 
Sbjct: 62  HEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYT 121

Query: 413 ALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSR 472
            ++   CK+  +  A ELL  M+ AG  P+  +++ L+ G C + N E    LL    + 
Sbjct: 122 KVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAAS 181

Query: 473 GLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKAC 532
           G+  DV  Y  L+   CK  ++  A++L   M+ +G   D V Y+S  Y   ++G+    
Sbjct: 182 GVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNA 241

Query: 533 SDILDDM 539
             +L+ M
Sbjct: 242 HQVLEQM 248



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 143/283 (50%), Gaps = 4/283 (1%)

Query: 261 MEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRAND 318
           M+R G  P+ VT+N+L++GF ++GR  +  RL   +  +G  PN V+Y  L++G C+   
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60

Query: 319 LEEALRLREVMAAKG--VYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTC 376
             EA  L   M ++G    P +VTY+++L   CK G++ ++  LL E+  + + PD +  
Sbjct: 61  WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 377 NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD 436
             ++ + CK      A+++   M+ AG      T+  LI G C+ K +++A  LL  M  
Sbjct: 121 TKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAA 180

Query: 437 AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDY 496
           +G      +Y+ L+DG C     +   +LL+   + G   DV  Y + +   CK  KV  
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLN 240

Query: 497 AQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
           A ++   M+ +    + V Y ++     ++G+     ++++ M
Sbjct: 241 AHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQM 283



 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 65/240 (27%), Positives = 111/240 (46%), Gaps = 2/240 (0%)

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M   G  P  VT+N+++    K+GR  D  RLL  M  + I P+ V+ N L+   CK+  
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60

Query: 389 TASAMKVKNRMLEAG--LMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSY 446
              A ++   M+  G     D  TY  L+ G+CKA +++ ++ELL  ++  G  P    Y
Sbjct: 61  WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 447 SWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQG 506
           + ++   C        L+LL+E +  G C  +  +  LI   C+++ ++ A  L   M  
Sbjct: 121 TKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAA 180

Query: 507 NGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
           +G+  D V Y +L     +AG  +    +L+ M        +  Y SF     K  ++L+
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLN 240



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/222 (25%), Positives = 96/222 (43%), Gaps = 21/222 (9%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHV 132
           ++  ++ ++ T++  L K+    +A  M+E++A  D       LN +        G S V
Sbjct: 252 DHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCG----LNVV--------GYSTV 299

Query: 133 LSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMV 192
           +  L      L  TQ+   V + M      P +   + L+N L K    +   +  ++M 
Sbjct: 300 VDGLC----KLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMA 355

Query: 193 QLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRAD-----LFTYNTLIALYCK 247
             G   N   Y  L+H  C    + + E+++ EM       D     + TYN LI   CK
Sbjct: 356 MEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCK 415

Query: 248 KGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA 289
            G   +AL    RM  +G  PD V+Y++++ G  R GR  +A
Sbjct: 416 AGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQA 457


>gi|218197339|gb|EEC79766.1| hypothetical protein OsI_21159 [Oryza sativa Indica Group]
          Length = 410

 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 113/361 (31%), Positives = 175/361 (48%), Gaps = 2/361 (0%)

Query: 167 ACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEM 226
           ACT L+N   K        +V+ +M  LG+  N   Y  L+H        +K   L  EM
Sbjct: 40  ACTALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALFEEM 99

Query: 227 EFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRM 286
               V  +L+TYN LI  +C+ G    A ++ D M   GI  ++V+YN+LI G CR G++
Sbjct: 100 RRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKL 159

Query: 287 REARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSI 344
            +A +L   ++  G  P+ +T+  L+DGY +A  +  AL     M A G  P  VTYN +
Sbjct: 160 WDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNML 219

Query: 345 LRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGL 404
           +   C+   +  ANR L++M E+ + P  VT   LI+++ +      A ++   M +AGL
Sbjct: 220 IAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGL 279

Query: 405 MLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLK 464
            +D  TY  L+   C    M  A++L   M + G  PS   Y  ++ GY  + +    LK
Sbjct: 280 EVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALK 339

Query: 465 LLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYW 524
           L+ E   +GL  + + Y   IR  CK +K   A+ L + M   G+     I  +L  A  
Sbjct: 340 LIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEAEALLDDMVRAGLQTSESICQALLDAKA 399

Query: 525 R 525
           R
Sbjct: 400 R 400



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 105/338 (31%), Positives = 170/338 (50%), Gaps = 3/338 (0%)

Query: 211 CKSSDVDKVEKLLCE-MEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
           C + DV     +L    +  D   D+     L+   CK G   EA  V D M   G++P+
Sbjct: 13  CAAGDVRSALAMLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRVFDEMPLLGLAPN 72

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLRE 327
            VTY +L+HG+   G+  +   LF +++  G  PN  TY  LI  +CR  + E A  L +
Sbjct: 73  EVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFD 132

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
            M  +G+   VV+YN+++  LC+ G++ DA +LL+ M  +   P  +T N L++ Y K G
Sbjct: 133 EMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAG 192

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
             ++A+   N+M  AG      TY  LI GFC+A++M  A   L  M + G  P+  +Y+
Sbjct: 193 KMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYT 252

Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGN 507
            L+D +  +N+     ++L      GL VD   Y  L+R  C +  +  A++LF  M   
Sbjct: 253 ILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEK 312

Query: 508 GILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
           G+   +VIY  + Y Y R G       ++ +M ++ L+
Sbjct: 313 GVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLI 350



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 99/337 (29%), Positives = 165/337 (48%), Gaps = 2/337 (0%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           +VFD+M +  L P+    T L++        +  + ++++M + GV  N++ YN LI   
Sbjct: 59  RVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEW 118

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           C++ + ++   L  EM  + +  ++ +YNTLIA  C+ G  ++A  + D M  EG  P I
Sbjct: 119 CRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSI 178

Query: 271 VTYNSLIHGFCREGRMREARRLFRDIKGA--TPNHVTYTTLIDGYCRANDLEEALRLREV 328
           +T+N L+ G+ + G+M  A   F  +K A   P+ VTY  LI G+CRA D+  A R    
Sbjct: 179 ITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSD 238

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M  +G+ P  VTY  ++    +E  +  A  +L  M +  +  D  T   L+ A C  G+
Sbjct: 239 MKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGN 298

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
              A K+   M E G+      Y  +I+G+ +      A +L+  M   G  P+  SY  
Sbjct: 299 MKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSASYGL 358

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
            +   C  +  +    LLD+ V  GL    S+ +AL+
Sbjct: 359 TIRVLCKDDKCQEAEALLDDMVRAGLQTSESICQALL 395



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 98/307 (31%), Positives = 148/307 (48%), Gaps = 2/307 (0%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           + G  +F++MR   + P+L+    L+    +    +    ++ +M   G+V N+  YN L
Sbjct: 90  EKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTL 149

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           I   C+   +    KLL  M  +  R  + T+N L+  Y K G    AL   ++M+  G 
Sbjct: 150 IAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGF 209

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALR 324
            P  VTYN LI GFCR   M  A R   D+K  G  P  VTYT LID + R N + +A  
Sbjct: 210 QPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFE 269

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           +   M   G+     TY  ++R LC EG ++DA +L   M EK + P NV  + +I  Y 
Sbjct: 270 ILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYG 329

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           + G +  A+K+   M + GL+ +  +Y   I   CK  +   A+ LL  M+ AG   S  
Sbjct: 330 REGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEAEALLDDMVRAGLQTSES 389

Query: 445 SYSWLVD 451
               L+D
Sbjct: 390 ICQALLD 396



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 102/349 (29%), Positives = 162/349 (46%), Gaps = 2/349 (0%)

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER 263
             L++ CCK  DV +  ++  EM    +  +  TY  L+  Y   G   +  A+ + M R
Sbjct: 42  TALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALFEEMRR 101

Query: 264 EGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEE 321
            G+ P++ TYN LI  +CR G    AR LF +  ++G   N V+Y TLI G CR   L +
Sbjct: 102 GGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWD 161

Query: 322 ALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
           A +L ++M  +G  P ++T+N ++    K G++ +A    N+M      P  VT N LI 
Sbjct: 162 AAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIA 221

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
            +C+  D   A +  + M E GL   + TY  LI  F +   M  A E+L GM  AG   
Sbjct: 222 GFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEV 281

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
              +Y  LV   C + N +   KL      +G+     +Y  +I  + ++     A +L 
Sbjct: 282 DAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLI 341

Query: 502 NLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKI 550
             M+  G++ +S  Y        +  + +    +LDDM R  L  +  I
Sbjct: 342 MEMRQKGLIPNSASYGLTIRVLCKDDKCQEAEALLDDMVRAGLQTSESI 390



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 66/246 (26%), Positives = 119/246 (48%), Gaps = 2/246 (0%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D  ++ D MR     P +    +L++   K          + +M   G   +   YN+LI
Sbjct: 161 DAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLI 220

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
              C++ D+ +  + L +M+ + +     TY  LI  + ++    +A  +   ME+ G+ 
Sbjct: 221 AGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLE 280

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
            D  TY  L+   C EG M++AR+LF+ +  KG  P++V Y  +I GY R     +AL+L
Sbjct: 281 VDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKL 340

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
              M  KG+ P   +Y   +R LCK+ + ++A  LL++M    +      C  L++A  +
Sbjct: 341 IMEMRQKGLIPNSASYGLTIRVLCKDDKCQEAEALLDDMVRAGLQTSESICQALLDAKAR 400

Query: 386 IGDTAS 391
           +  +A+
Sbjct: 401 LRGSAN 406



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 70/260 (26%), Positives = 109/260 (41%), Gaps = 9/260 (3%)

Query: 314 CRANDLEEALRLREVMAAKGVYPG-----VVTYNSILRKLCKEGRIRDANRLLNEMNEKK 368
           C A D+  AL     M A+G   G     V    +++   CK G + +A R+ +EM    
Sbjct: 13  CAAGDVRSAL----AMLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRVFDEMPLLG 68

Query: 369 IAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAK 428
           +AP+ VT   L++ Y   G       +   M   G+  + +TY  LI  +C+  E + A+
Sbjct: 69  LAPNEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERAR 128

Query: 429 ELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRF 488
            L   M   G   +  SY+ L+ G C         KLLD   + G    +  +  L+  +
Sbjct: 129 SLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGY 188

Query: 489 CKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITL 548
            K  K+  A   FN M+  G    +V Y  L   + RA +    +  L DM  R L  T 
Sbjct: 189 GKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTK 248

Query: 549 KIYRSFSASYAKDNEILDLF 568
             Y     S+A++N +   F
Sbjct: 249 VTYTILIDSFARENHMGKAF 268



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 72/308 (23%), Positives = 124/308 (40%), Gaps = 28/308 (9%)

Query: 48  LNLYNC-----CHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLE 102
           L  YNC     C       A   + E  V     ++ S+ T+I  L ++     A  +L+
Sbjct: 108 LYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLD 167

Query: 103 KIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLM 162
              +R   + PS++                 + LV  Y       + L  F+QM+     
Sbjct: 168 M--MRTEGTRPSII---------------TFNLLVDGYGKAGKMSNALPFFNQMKAAGFQ 210

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
           P      +L+    + R      +    M + G+      Y +LI +  + + + K  ++
Sbjct: 211 PSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEI 270

Query: 223 LCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR 282
           L  ME   +  D  TY  L+   C +G   +A  +   M  +G+ P  V Y+ +I+G+ R
Sbjct: 271 LAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGR 330

Query: 283 EGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVT 340
           EG   +A +L  ++  KG  PN  +Y   I   C+ +  +EA  L + M    V  G+ T
Sbjct: 331 EGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEAEALLDDM----VRAGLQT 386

Query: 341 YNSILRKL 348
             SI + L
Sbjct: 387 SESICQAL 394


>gi|449511130|ref|XP_004163870.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Cucumis sativus]
          Length = 847

 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 123/503 (24%), Positives = 227/503 (45%), Gaps = 56/503 (11%)

Query: 63  FFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKI 122
           FF WA+  +  Y+H    +  M+ IL+K K  + A+ +L  +  R     P         
Sbjct: 232 FFYWADR-LWRYRHDSSVYLVMLEILSKTKLCQGAKRILRLMTRRRIQLCPEAF------ 284

Query: 123 HDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTD 182
                       ++++ Y+     +D ++V   M+   + P+L  C   ++ L       
Sbjct: 285 -----------GFVMVSYSRAGRLRDAMKVLTLMQKAGVEPNLSICNTAIHILVMGNELK 333

Query: 183 MVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFK------------- 229
              +  ++MV +G+  N+  YN LI   C    VD+  +L+ +M  K             
Sbjct: 334 KALRFAERMVLIGIAPNVVTYNCLIKGYCNVHQVDQAMELIDQMPSKGCSPDKVSYYTVM 393

Query: 230 ----------DVR-------------ADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
                     ++R              D  TYN+LI +  K G   EAL +    E+   
Sbjct: 394 GLLCRDKRLNEIRELIKKMQTDSKLLPDHVTYNSLIQMLSKHGHGDEALEILQEAEKLRF 453

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
             D V Y++++H +C+EG++++A+ L  ++  KG  P+ VTYT+++DG+CR   L++A +
Sbjct: 454 KVDKVEYSAIVHAYCKEGKIQKAKELVSEMFSKGCDPDVVTYTSVLDGFCRIGKLDQAKK 513

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           + + M      P  VTY + L  LC+ G+  +A +++N   E+   P+ +T + +++   
Sbjct: 514 MMQQMYKHHCKPNAVTYTTFLNGLCRNGKSLEARKMMNMSEEEWWTPNAITYSVVVHGLR 573

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           + G    A  V   M+  G   +      L+H  C+  +   A +LL   ++ G + +  
Sbjct: 574 REGKLNEACDVVREMIGKGFFPNPVEINLLVHSLCRDGKPREANQLLKECMNKGCAVNVV 633

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
           +++ ++ G+C K++ EA L LLD+        D   Y ALI    K ++++ A  L   M
Sbjct: 634 NFTTVIHGFCQKDDLEAALSLLDDMYLCNKHPDTVTYTALIDALAKTDRIEEATELTMKM 693

Query: 505 QGNGILGDSVIYTSLAYAYWRAG 527
              G++   V Y S+ + Y R G
Sbjct: 694 LRQGLVPSPVTYRSVIHQYCRKG 716



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 139/537 (25%), Positives = 223/537 (41%), Gaps = 59/537 (10%)

Query: 83  TMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYAN 142
           T IHIL      K A    E++ L          N L+K                  Y N
Sbjct: 321 TAIHILVMGNELKKALRFAERMVLIGIAPNVVTYNCLIK-----------------GYCN 363

Query: 143 LKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHL 202
           +      +++ DQM      P   +   ++  L +D+  + + ++ KKM     +   H+
Sbjct: 364 VHQVDQAMELIDQMPSKGCSPDKVSYYTVMGLLCRDKRLNEIRELIKKMQTDSKLLPDHV 423

Query: 203 -YNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRM 261
            YN LI    K    D+  ++L E E    + D   Y+ ++  YCK+G   +A  +   M
Sbjct: 424 TYNSLIQMLSKHGHGDEALEILQEAEKLRFKVDKVEYSAIVHAYCKEGKIQKAKELVSEM 483

Query: 262 EREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCR---- 315
             +G  PD+VTY S++ GFCR G++ +A+++ + +      PN VTYTT ++G CR    
Sbjct: 484 FSKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTFLNGLCRNGKS 543

Query: 316 -------------------------------ANDLEEALRLREVMAAKGVYPGVVTYNSI 344
                                             L EA  +   M  KG +P  V  N +
Sbjct: 544 LEARKMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEACDVVREMIGKGFFPNPVEINLL 603

Query: 345 LRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGL 404
           +  LC++G+ R+AN+LL E   K  A + V   T+I+ +C+  D  +A+ + + M     
Sbjct: 604 VHSLCRDGKPREANQLLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLCNK 663

Query: 405 MLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLK 464
             D  TY ALI    K   ++ A EL   ML  G  PS  +Y  ++  YC K   E LLK
Sbjct: 664 HPDTVTYTALIDALAKTDRIEEATELTMKMLRQGLVPSPVTYRSVIHQYCRKGRVEDLLK 723

Query: 465 LLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYW 524
           LL + + +      + Y  +I + CK   ++ A  L   +       D+     L  +Y 
Sbjct: 724 LLKKMLLKSRF--QTAYNLVIEKLCKFGYLEEANSLLGEVLRTASRTDAKTCHVLMESYL 781

Query: 525 RAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDN--EILDLFWSHVVDRGLMS 579
             G P +   +   M+ R L+  LK+    S     +   E  D      V+RG +S
Sbjct: 782 NVGIPMSAYKVACRMFNRNLIPDLKLCEKVSKRLVVEGKLEEADRLVLRFVERGHVS 838



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 91/372 (24%), Positives = 176/372 (47%), Gaps = 3/372 (0%)

Query: 170 VLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFK 229
           V+L  L+K +L     ++ + M +  +      +  ++ +  ++  +    K+L  M+  
Sbjct: 251 VMLEILSKTKLCQGAKRILRLMTRRRIQLCPEAFGFVMVSYSRAGRLRDAMKVLTLMQKA 310

Query: 230 DVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA 289
            V  +L   NT I +        +AL   +RM   GI+P++VTYN LI G+C   ++ +A
Sbjct: 311 GVEPNLSICNTAIHILVMGNELKKALRFAERMVLIGIAPNVVTYNCLIKGYCNVHQVDQA 370

Query: 290 RRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL-REVMAAKGVYPGVVTYNSILR 346
             L   +  KG +P+ V+Y T++   CR   L E   L +++     + P  VTYNS+++
Sbjct: 371 MELIDQMPSKGCSPDKVSYYTVMGLLCRDKRLNEIRELIKKMQTDSKLLPDHVTYNSLIQ 430

Query: 347 KLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLML 406
            L K G   +A  +L E  + +   D V  + +++AYCK G    A ++ + M   G   
Sbjct: 431 MLSKHGHGDEALEILQEAEKLRFKVDKVEYSAIVHAYCKEGKIQKAKELVSEMFSKGCDP 490

Query: 407 DQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLL 466
           D  TY +++ GFC+  ++D AK+++  M      P+  +Y+  ++G C         K++
Sbjct: 491 DVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTFLNGLCRNGKSLEARKMM 550

Query: 467 DEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRA 526
           +         +   Y  ++    ++ K++ A  +   M G G   + V    L ++  R 
Sbjct: 551 NMSEEEWWTPNAITYSVVVHGLRREGKLNEACDVVREMIGKGFFPNPVEINLLVHSLCRD 610

Query: 527 GEPKACSDILDD 538
           G+P+  + +L +
Sbjct: 611 GKPREANQLLKE 622


>gi|168026089|ref|XP_001765565.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162683203|gb|EDQ69615.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 505

 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 132/447 (29%), Positives = 211/447 (47%), Gaps = 11/447 (2%)

Query: 93  HFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQV 152
           H     NM+EK AL+        L A  K    P   ++  S ++  +      Q+GL +
Sbjct: 38  HIYGEANMMEK-ALQ-------TLAAFTKEGGRP--TAYTYSSMIQVFMKGGDVQNGLLM 87

Query: 153 FDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCK 212
           + QM     +P      +L++SLAK    +    V+  M +L V  +++ Y +LI +   
Sbjct: 88  YKQMLKAKFVPDHTTFNILIDSLAKADQVEEACNVFGDMFKLNVSPDVYTYTILIRSLGT 147

Query: 213 SSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVT 272
              +D V KL   M  +  + +LFTY++++  +   G   EA  +  +M ++G+ PD VT
Sbjct: 148 IGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAFGSAGRVDEACDIFQQMVQKGLQPDAVT 207

Query: 273 YNSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAK 332
           YN LI  F + G++  A       +  T N VTY +L+    R  D++  + L   M AK
Sbjct: 208 YNILIDAFGKTGQLERAFDFVGKSRSFT-NEVTYNSLLSSLGRKGDIQGLMELFGQMKAK 266

Query: 333 GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
           G+    +TY  ++ +L   GR+ D  +L  EM +  I  D VT N +++   K G   +A
Sbjct: 267 GLVSNELTYAILIERLGWAGRVEDVWQLYLEMVDNDIKYDIVTINNVLDCLSKAGRVEAA 326

Query: 393 MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
            ++   M   GL  D  TY  LI+G  +A ++D A  LL  M + G +P+  +Y+ L+  
Sbjct: 327 FELFQDMKFKGLNADTVTYNILINGLGRAGKLDAAGALLLEMEENGCAPNIITYNTLISS 386

Query: 453 YCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGD 512
           Y   +N  A  +L  E   RG+  +V  Y +LI  F K  + D A  LF  M+  G   +
Sbjct: 387 YGKWSNLSAATRLFLEMKERGVAPNVVSYSSLIEGFGKAGRTDAAISLFREMKAEGCPPN 446

Query: 513 SVIYTSLAYAYWRAGEPKACSDILDDM 539
            V Y  L     RAG   A  + L +M
Sbjct: 447 HVTYNLLIDCLIRAGRFGAAMEYLREM 473



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 97/424 (22%), Positives = 179/424 (42%), Gaps = 34/424 (8%)

Query: 171 LLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKD 230
           +L  L   R  D V ++ + M +     +  L+N LIH   +++ ++K  + L     + 
Sbjct: 1   MLTLLGAARRYDDVQRLVESMQKDRTKLDTQLFNTLIHIYGEANMMEKALQTLAAFTKEG 60

Query: 231 VRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREAR 290
            R   +TY+++I ++ K G     L +  +M +    PD  T+N LI    +  ++ EA 
Sbjct: 61  GRPTAYTYSSMIQVFMKGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEEAC 120

Query: 291 RLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
            +F D+     +P+  TYT LI        ++  ++L E M A+G  P + TY+S++   
Sbjct: 121 NVFGDMFKLNVSPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAF 180

Query: 349 CKEGRIRDANRLLNEMNEKKIAPD--------------------------------NVTC 376
              GR+ +A  +  +M +K + PD                                 VT 
Sbjct: 181 GSAGRVDEACDIFQQMVQKGLQPDAVTYNILIDAFGKTGQLERAFDFVGKSRSFTNEVTY 240

Query: 377 NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD 436
           N+L+++  + GD    M++  +M   GL+ ++ TY  LI     A  ++   +L   M+D
Sbjct: 241 NSLLSSLGRKGDIQGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQLYLEMVD 300

Query: 437 AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDY 496
                   + + ++D        EA  +L  +   +GL  D   Y  LI    +  K+D 
Sbjct: 301 NDIKYDIVTINNVLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGLGRAGKLDA 360

Query: 497 AQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSA 556
           A  L   M+ NG   + + Y +L  +Y +     A + +  +M  R +   +  Y S   
Sbjct: 361 AGALLLEMEENGCAPNIITYNTLISSYGKWSNLSAATRLFLEMKERGVAPNVVSYSSLIE 420

Query: 557 SYAK 560
            + K
Sbjct: 421 GFGK 424



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/216 (22%), Positives = 85/216 (39%)

Query: 353 RIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYK 412
           R  D  RL+  M + +   D    NTLI+ Y +      A++      + G     +TY 
Sbjct: 10  RYDDVQRLVESMQKDRTKLDTQLFNTLIHIYGEANMMEKALQTLAAFTKEGGRPTAYTYS 69

Query: 413 ALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSR 472
           ++I  F K  ++     +   ML A F P + +++ L+D     +  E    +  +    
Sbjct: 70  SMIQVFMKGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEEACNVFGDMFKL 129

Query: 473 GLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKAC 532
            +  DV  Y  LIR      ++D   +LF  M   G   +   Y S+ +A+  AG     
Sbjct: 130 NVSPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAFGSAGRVDEA 189

Query: 533 SDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLF 568
            DI   M ++ L      Y     ++ K  ++   F
Sbjct: 190 CDIFQQMVQKGLQPDAVTYNILIDAFGKTGQLERAF 225


>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
 gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
          Length = 796

 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 117/457 (25%), Positives = 215/457 (47%), Gaps = 41/457 (8%)

Query: 125 DPDGNSHVLSWLVIFYANLKMTQ--DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTD 182
           D     +++++  + +  L + Q  + +++  +M  H L P      +LL+ L K     
Sbjct: 267 DKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCT 326

Query: 183 MVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLI 242
              K++  M++ G+  ++ +Y +++H       + ++   L  M    +  + + +N + 
Sbjct: 327 EARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVF 386

Query: 243 ALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGAT 300
             + KK M  EA+ + ++M ++G+SP++V Y +LI   C+ GR+ +A   F  +  +G  
Sbjct: 387 CAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVA 446

Query: 301 PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRL 360
           PN V +T+L+ G C  +  E+A  L   M  +G++P VV +N+I+  LC EGR+  A RL
Sbjct: 447 PNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRL 506

Query: 361 LNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCK 420
           ++ M      PD ++ N LI  +C +G T  A K+ + ML  GL  ++ TY  L+HG+C+
Sbjct: 507 IDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCR 566

Query: 421 AKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG-------------YCN------------ 455
              +D A  +   ML  G +P   +Y+ ++ G             Y N            
Sbjct: 567 DGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYT 626

Query: 456 ---------KNN--EEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
                    KNN  +EA LK+     S+ L VD+  +  +I    K  + + A  LF  +
Sbjct: 627 YNIILNGLSKNNCVDEA-LKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLFATI 685

Query: 505 QGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
             NG++ D   Y  +A      G  +    +  +M +
Sbjct: 686 SANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEK 722



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 116/446 (26%), Positives = 201/446 (45%), Gaps = 18/446 (4%)

Query: 112 TPSVL--NALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACT 169
           TP+V+  N L+K   D +     L  L        M  DG       +V +  P+L +  
Sbjct: 163 TPNVVSYNTLLKGFCDENRAEEALELL-------HMMADG-------QVRSCPPNLVSYN 208

Query: 170 VLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFK 229
            ++N    +   D  + ++  M   G+  N+  Y ++I   CK+  VD+ E +  +M  K
Sbjct: 209 TVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDK 268

Query: 230 DVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA 289
            VR ++ TY  LI  Y   G   E + +   M   G+ PD  TY  L+   C++G+  EA
Sbjct: 269 GVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEA 328

Query: 290 RRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRK 347
           R+LF  +  KG  P+   Y  ++ GY     L E     ++M   G+ P    +N +   
Sbjct: 329 RKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCA 388

Query: 348 LCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLD 407
             K+  I +A  + N+M ++ ++P+ V   TLI+A CK+G    A    N+M+  G+  +
Sbjct: 389 FAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPN 448

Query: 408 QFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLD 467
              + +L++G C   + + A EL F M++ G  P+   ++ ++   C +       +L+D
Sbjct: 449 IVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLID 508

Query: 468 EFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
                G   D+  Y ALIR  C   K D A +L ++M   G+  +   Y +L + Y R G
Sbjct: 509 LMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDG 568

Query: 528 EPKACSDILDDMYRRRLMITLKIYRS 553
                  +  +M    +   +  Y +
Sbjct: 569 RIDDAYSVFQEMLSNGITPVVVTYNT 594



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 106/378 (28%), Positives = 182/378 (48%), Gaps = 4/378 (1%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           +F  M    + P++   T++++ L K ++ D    V+++M+  GV  NI  Y  LIH   
Sbjct: 226 LFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRPNIVTYTCLIHGYL 285

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
                 +V ++L EM    +  D FTY  L+   CKKG   EA  + D M R+GI PD+ 
Sbjct: 286 SIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGIKPDVS 345

Query: 272 TYNSLIHGFCREGRMREARRLFRDI---KGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
            Y  ++HG+  +G + E    F D+    G +PNH  +  +   + +   + EA+ +   
Sbjct: 346 IYGIILHGYATKGALSEMHS-FLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNK 404

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M  +G+ P VV Y +++  LCK GR+ DA    N+M  + +AP+ V   +L+   C I  
Sbjct: 405 MRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDK 464

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
              A ++   M+  G+  +   +  ++   C    +  A+ L+  M   G  P   SY+ 
Sbjct: 465 WEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNA 524

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG 508
           L+ G+C     +   KLLD  +S GL  +   Y  L+  +C+  ++D A  +F  M  NG
Sbjct: 525 LIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNG 584

Query: 509 ILGDSVIYTSLAYAYWRA 526
           I    V Y ++ +  ++ 
Sbjct: 585 ITPVVVTYNTILHGLFKT 602



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 117/430 (27%), Positives = 195/430 (45%), Gaps = 40/430 (9%)

Query: 179 RLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA---DL 235
           R+ + +  + ++M +LG   N+  YN L+   C  +  ++  +LL  M    VR+   +L
Sbjct: 145 RVGEAMGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNL 204

Query: 236 FTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD 295
            +YNT+I  +  +G   +A  +   M  +GI P++VTY  +I G C+   +  A  +F+ 
Sbjct: 205 VSYNTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQ 264

Query: 296 I--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGR 353
           +  KG  PN VTYT LI GY      +E +R+ + M+A G+ P   TY  +L  LCK+G+
Sbjct: 265 MIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGK 324

Query: 354 IRDANRLLNEMNEKKIAPD-----------------------------------NVTCNT 378
             +A +L + M  K I PD                                   +   N 
Sbjct: 325 CTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNI 384

Query: 379 LINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAG 438
           +  A+ K      AM + N+M + GL  +   Y  LI   CK   +D A+     M++ G
Sbjct: 385 VFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEG 444

Query: 439 FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQ 498
            +P+   ++ LV G C  +  E   +L  E V++G+  +V  +  ++   C + +V  AQ
Sbjct: 445 VAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQ 504

Query: 499 RLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASY 558
           RL +LM+  G   D + Y +L   +   G+    S +LD M    L      Y +    Y
Sbjct: 505 RLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGY 564

Query: 559 AKDNEILDLF 568
            +D  I D +
Sbjct: 565 CRDGRIDDAY 574



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 98/335 (29%), Positives = 167/335 (49%), Gaps = 12/335 (3%)

Query: 206 LIHACCKSSDV-DKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRM--- 261
           L+   C +  V + +  LL  M       ++ +YNTL+  +C +    EAL +   M   
Sbjct: 136 LLKGLCDAKRVGEAMGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADG 195

Query: 262 EREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDL 319
           +     P++V+YN++I+GF  EG++ +A  LF D+  +G  PN VTYT +IDG C+A  +
Sbjct: 196 QVRSCPPNLVSYNTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVV 255

Query: 320 EEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTL 379
           + A  + + M  KGV P +VTY  ++      G+ ++  R+L EM+   + PD  T   L
Sbjct: 256 DRAEGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLL 315

Query: 380 INAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGF 439
           ++  CK G    A K+ + M+  G+  D   Y  ++HG+     +      L  M+  G 
Sbjct: 316 LDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGI 375

Query: 440 SPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQR 499
           SP++  ++ +   +  K      + + ++   +GL  +V  Y  LI   CK  +VD A+ 
Sbjct: 376 SPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAEL 435

Query: 500 LFNLMQGNGILGDSVIYTSLAYA------YWRAGE 528
            FN M   G+  + V++TSL Y       + +AGE
Sbjct: 436 KFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGE 470



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 101/373 (27%), Positives = 172/373 (46%), Gaps = 6/373 (1%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAK-DRLTDMVWKV 187
           N ++ + +   +A   M  + + +F++MR   L P++     L+++L K  R+ D   K 
Sbjct: 378 NHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELK- 436

Query: 188 YKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCK 247
           + +M+  GV  NI ++  L++  C     +K  +L  EM  + +  ++  +NT++   C 
Sbjct: 437 FNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCT 496

Query: 248 KGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK---GATPNHV 304
           +G   +A  + D MER G  PDI++YN+LI G C  G+  EA +L  DI    G  PN  
Sbjct: 497 EGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLL-DIMLSVGLKPNEC 555

Query: 305 TYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM 364
           TY TL+ GYCR   +++A  + + M + G+ P VVTYN+IL  L K  R  +A  L   M
Sbjct: 556 TYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNM 615

Query: 365 NEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEM 424
                     T N ++N   K      A+K+   +    L +D  T+  +I    K    
Sbjct: 616 ITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRK 675

Query: 425 DIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRAL 484
           + A  L   +   G  P   +Y  + +    + + E    +  E    G   +  +   L
Sbjct: 676 EDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSGCAPNSLMLNFL 735

Query: 485 IRRFCKKEKVDYA 497
           +RR   +  +  A
Sbjct: 736 VRRLLLRGDISRA 748



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 100/356 (28%), Positives = 166/356 (46%), Gaps = 9/356 (2%)

Query: 231 VRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG-ISPDIVTYNSLIHGFCREGRMREA 289
           V  D+FTY+ L+  +C+ G      A    + + G    D+V  N L+ G C   R+ EA
Sbjct: 90  VAPDVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRLLKGLCDAKRVGEA 149

Query: 290 RR-LFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMA---AKGVYPGVVTYNS 343
              L R +   G TPN V+Y TL+ G+C  N  EEAL L  +MA    +   P +V+YN+
Sbjct: 150 MGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNT 209

Query: 344 ILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAG 403
           ++     EG++  A  L  +M ++ I P+ VT   +I+  CK      A  V  +M++ G
Sbjct: 210 VINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKG 269

Query: 404 LMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALL 463
           +  +  TY  LIHG+    +      +L  M   G  P   +Y  L+D  C K       
Sbjct: 270 VRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEAR 329

Query: 464 KLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAY 523
           KL D  + +G+  DVS+Y  ++  +  K  +       +LM GNGI  +  I+  +  A+
Sbjct: 330 KLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAF 389

Query: 524 WRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD--LFWSHVVDRGL 577
            +        DI + M ++ L   +  Y +   +  K   + D  L ++ +++ G+
Sbjct: 390 AKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGV 445



 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 83/346 (23%), Positives = 152/346 (43%), Gaps = 39/346 (11%)

Query: 122 IHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLT 181
           I++    N  V + LV     +   +   ++F +M    + P++     ++ +L  +   
Sbjct: 441 INEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRV 500

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
               ++   M ++G   +I  YN LI   C     D+  KLL  M    ++ +  TYNTL
Sbjct: 501 MKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTL 560

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGA 299
           +  YC+ G   +A +V   M   GI+P +VTYN+++HG  +  R  EA+ L+ ++   G 
Sbjct: 561 LHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGK 620

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLRE-------------------------------- 327
             +  TY  +++G  + N ++EAL++ +                                
Sbjct: 621 QWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMN 680

Query: 328 ---VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
               ++A G+ P V TY  I   L +EG + + + + +EM +   AP+++  N L+    
Sbjct: 681 LFATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSGCAPNSLMLNFLVRRLL 740

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL 430
             GD + A    +++ E    L+  T   LI  F  ++E   AK L
Sbjct: 741 LRGDISRAGAYLSKIDEKNFSLEASTTSMLISLF--SREEHQAKSL 784



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 61/257 (23%), Positives = 115/257 (44%), Gaps = 2/257 (0%)

Query: 146 TQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNV 205
           T +  ++ D M    L P+      LL+   +D   D  + V+++M+  G+   +  YN 
Sbjct: 535 TDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNT 594

Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
           ++H   K+    + ++L   M     +  ++TYN ++    K     EAL +   +  + 
Sbjct: 595 ILHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKD 654

Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEAL 323
           +  DI+T+N +I    ++GR  +A  LF  I   G  P+  TY  + +       LEE  
Sbjct: 655 LQVDIITFNIMIGALLKDGRKEDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLEEFD 714

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
            +   M   G  P  +  N ++R+L   G I  A   L++++EK  + +  T + LI+ +
Sbjct: 715 GMFSEMEKSGCAPNSLMLNFLVRRLLLRGDISRAGAYLSKIDEKNFSLEASTTSMLISLF 774

Query: 384 CKIGDTASAMKVKNRML 400
            +    A ++  K   L
Sbjct: 775 SREEHQAKSLPEKYHFL 791


>gi|414586649|tpg|DAA37220.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
 gi|414586650|tpg|DAA37221.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
          Length = 969

 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 117/412 (28%), Positives = 202/412 (49%), Gaps = 22/412 (5%)

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
           D  +++ K M++ G V +   Y+ +I   C++  V+K   L  EM+   V  D++TY  L
Sbjct: 437 DKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTIL 496

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGA 299
           I  +CK G+  +A +  D ME  G SP +VTY +L+H + +  ++ +A  +F  +   G 
Sbjct: 497 IDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGC 556

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKG----------------VYPGVVTYNS 343
            PN +TY+ L+DG C+A + ++A  +   M                    + P VVTY +
Sbjct: 557 APNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGA 616

Query: 344 ILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAG 403
           ++  LCK  ++ DA  LL+ M+     P+++  + LI+ +CK+G   +A +V  RM + G
Sbjct: 617 LIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCG 676

Query: 404 LMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALL 463
            +    TY +LI    K + +D+A ++L  ML++  +P+  +Y+ ++DG C     +  L
Sbjct: 677 YLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKAL 736

Query: 464 KLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAY 523
           KLL     RG   +V  Y +LI    K  KVD + +LF  M   G   + V Y  L    
Sbjct: 737 KLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHC 796

Query: 524 WRAGEPKACSDILDDM----YRRRLMITLKIYRSFSASYAKDNEILDLFWSH 571
             AG       +L +M    + + +     + + FS  +     +L+   SH
Sbjct: 797 CAAGLLDEAHSLLSEMKQTYWPKYVQGYCSVVQGFSKKFIASLGLLEELESH 848



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 108/421 (25%), Positives = 200/421 (47%), Gaps = 27/421 (6%)

Query: 110 LSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQ-------MRVHNLM 162
           L +P +L    K++++   +S VL+   +  AN      G+  FD+       M     +
Sbjct: 395 LPSPDLLALAEKVYEEMLASSCVLNK--VNTANFARCLCGMGKFDKAFQIIKLMMRKGFV 452

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
           P     + ++  L +    +  + ++++M  +GV+ +++ Y +LI + CK   +++    
Sbjct: 453 PDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSW 512

Query: 223 LCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR 282
             EME       + TY  L+  Y K     +A  +  RM   G +P+ +TY++L+ G C+
Sbjct: 513 FDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCK 572

Query: 283 EGRMREARRLFRDIKGAT------------------PNHVTYTTLIDGYCRANDLEEALR 324
            G  ++A  ++  + G +                  PN VTY  LIDG C+A+ + +A  
Sbjct: 573 AGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQE 632

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           L +VM++ G  P  + Y++++   CK G++ +A  +   M++    P   T  +LI+A  
Sbjct: 633 LLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMF 692

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           K      A+KV ++MLE+    +  TY A+I G C+  E   A +LL  M   G +P+  
Sbjct: 693 KDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVV 752

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
           +Y+ L+DG       +  L+L  + +++G   +   YR LI   C    +D A  L + M
Sbjct: 753 TYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEM 812

Query: 505 Q 505
           +
Sbjct: 813 K 813



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 116/485 (23%), Positives = 198/485 (40%), Gaps = 30/485 (6%)

Query: 57  PSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVL 116
           P L   FF WAE  V  Y H+   +  +  +L  +   ++ + +L +I   D      +L
Sbjct: 117 PELCVRFFLWAERQV-GYSHTGACYNALAEVLHFDDRARTTERLLREIGEDDREVLGRLL 175

Query: 117 NALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLA 176
           N +V+            +W              L+   +++     P       L+  LA
Sbjct: 176 NVIVR------KCCRHGAW-----------AKALEELGRLKDFGYRPSGATYNALVQVLA 218

Query: 177 KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLF 236
                DM ++V K+M +LG   +         A CK     +    L  +E +D + D  
Sbjct: 219 TAGQMDMGFRVQKEMSELGFCTDKFTVGCFAQALCKEG---RWSDALVMIEREDFKLDTV 275

Query: 237 TYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI 296
               +I+   +  +  EA++   RM      P++VTY +L+ GF ++ ++   +R+   +
Sbjct: 276 LCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCKRIISMM 335

Query: 297 --KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRI 354
             +G  PN   + +L+  YC A D   A +L   MA  G  PG V YN  +  +C    +
Sbjct: 336 MNEGCNPNPSLFNSLVHSYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSICSGEEL 395

Query: 355 RD------ANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ 408
                   A ++  EM       + V         C +G    A ++   M+  G + D 
Sbjct: 396 PSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKGFVPDT 455

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
            TY  +I   C+A +++ A  L   M   G  P   +Y+ L+D +C     E      DE
Sbjct: 456 STYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDE 515

Query: 469 FVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
             S G    V  Y AL+  + K ++V  A  +F+ M   G   +++ Y++L     +AGE
Sbjct: 516 MESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGE 575

Query: 529 P-KAC 532
             KAC
Sbjct: 576 SQKAC 580



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 88/332 (26%), Positives = 149/332 (44%), Gaps = 7/332 (2%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D  ++ D M  +   P+      L++   K    D   +V+ +M + G +  +H Y  LI
Sbjct: 629 DAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLI 688

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
            A  K   +D   K+L +M       ++ TY  +I   C+ G   +AL +   ME+ G +
Sbjct: 689 DAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCN 748

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
           P++VTY SLI G  + G++  + +LF  +  +G  PN+VTY  LI+  C A  L+EA  L
Sbjct: 749 PNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHSL 808

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
              M        V  Y S+++   K  +   +  LL E+    +         LI+++ K
Sbjct: 809 LSEMKQTYWPKYVQGYCSVVQGFSK--KFIASLGLLEELESHGMVSIAPVYGLLIDSFSK 866

Query: 386 IGDTASAMKVKNRMLEAGLMLD---QFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
            G    A+++   M+E    L+   + TY +LI   C A +++ A EL   +   G  P 
Sbjct: 867 AGRLEKALELHKEMMEVSSSLNITSKDTYTSLIQALCLASQLEKAFELYSEITRKGVVPE 926

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGL 474
             ++  L+ G    N     L+L       G+
Sbjct: 927 LSAFICLIKGLIKVNKWNEALQLCYSMCDEGV 958



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 93/393 (23%), Positives = 158/393 (40%), Gaps = 15/393 (3%)

Query: 201 HLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDR 260
            L NV++  CC+     K  + L  ++    R    TYN L+ +    G       VQ  
Sbjct: 173 RLLNVIVRKCCRHGAWAKALEELGRLKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKE 232

Query: 261 MEREGISPDIVTYNSLIHGFCREGRMREARRLFR--DIKGATPNHVTYTTLIDGYCRAND 318
           M   G   D  T        C+EGR  +A  +    D K  T   V  T +I G   A+ 
Sbjct: 233 MSELGFCTDKFTVGCFAQALCKEGRWSDALVMIEREDFKLDT---VLCTQMISGLMEASL 289

Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT 378
            +EA+     M      P VVTY ++L    K+ ++    R+++ M  +   P+    N+
Sbjct: 290 FDEAISFLHRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNS 349

Query: 379 LINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMD------IAKELLF 432
           L+++YC   D   A K+ NRM   G       Y   I   C  +E+       +A+++  
Sbjct: 350 LVHSYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSICSGEELPSPDLLALAEKVYE 409

Query: 433 GMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKE 492
            ML +    +  + +      C     +   +++   + +G   D S Y  +I   C+  
Sbjct: 410 EMLASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAM 469

Query: 493 KVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYR 552
           KV+ A  LF  M+  G++ D   YT L  ++ + G  +      D+M       ++  Y 
Sbjct: 470 KVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYT 529

Query: 553 SFSASYAKDNEIL---DLFWSHVVDRGLMSKHI 582
           +   +Y K  ++    D+F   +VD G     I
Sbjct: 530 ALLHAYLKTKQVPQASDIF-HRMVDAGCAPNTI 561



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 69/316 (21%), Positives = 139/316 (43%), Gaps = 35/316 (11%)

Query: 63  FFKWAESAVPNYKHSLQSHWTMIHILTKNKHF----KSAQNMLEKIALRDFLSTPSVLNA 118
           FF+ ++     Y  ++ ++ ++I  + K++      K    MLE     + ++  ++++ 
Sbjct: 669 FFRMSKCG---YLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDG 725

Query: 119 LVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKD 178
           L +I +                      Q  L++   M      P++   T L++ L K 
Sbjct: 726 LCRIGE---------------------CQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKS 764

Query: 179 RLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTY 238
              DM  +++ +M+  G   N   Y VLI+ CC +  +D+   LL EM+       +  Y
Sbjct: 765 GKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYVQGY 824

Query: 239 NTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKG 298
            +++  + KK     +L + + +E  G+      Y  LI  F + GR+ +A  L +++  
Sbjct: 825 CSVVQGFSKK--FIASLGLLEELESHGMVSIAPVYGLLIDSFSKAGRLEKALELHKEMME 882

Query: 299 ATPN-----HVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGR 353
            + +       TYT+LI   C A+ LE+A  L   +  KGV P +  +  +++ L K  +
Sbjct: 883 VSSSLNITSKDTYTSLIQALCLASQLEKAFELYSEITRKGVVPELSAFICLIKGLIKVNK 942

Query: 354 IRDANRLLNEMNEKKI 369
             +A +L   M ++ +
Sbjct: 943 WNEALQLCYSMCDEGV 958


>gi|359495888|ref|XP_003635109.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g24830-like [Vitis vinifera]
          Length = 580

 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 115/360 (31%), Positives = 177/360 (49%), Gaps = 5/360 (1%)

Query: 181 TDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDV---RADLFT 237
            D    ++  M   G+  N   YN+LIHA CK   +    KLL ++   D     +D+ T
Sbjct: 217 VDKALYLFSTMANSGIGPNKVTYNILIHALCKKGLLKDARKLLEKILDDDCGKETSDIIT 276

Query: 238 YNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI- 296
               +    KKG   +AL   D M + G   D+V YN LIHGFC    M  A R F ++ 
Sbjct: 277 STIFMDGCLKKGDMVQALVHWDEMLQRGTQIDVVAYNVLIHGFCLIQDMNSAYRYFCEMF 336

Query: 297 -KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIR 355
            +G  P+  TY TLI G+C+  +L+EA  +  VM+  G  P +++Y  I++ LC  G + 
Sbjct: 337 KRGLLPDIFTYNTLISGFCKIGNLDEACYIHGVMSKMGAAPDLISYKMIIQGLCIHGDVI 396

Query: 356 DANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALI 415
            AN+ L  M E  + P+ +  N +I+ + + GD ++A+ ++++M+  G+  + FTY ALI
Sbjct: 397 RANQFLVCMLENLMVPEPLIWNVVIDGHGRHGDLSNALSIRDQMVSFGIPPNVFTYNALI 456

Query: 416 HGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLC 475
           H   K   +  A  +   ML  G  P   +Y+ L+   CN       L+L DE + RG  
Sbjct: 457 HAQIKGGNIVDAHSIKKEMLLNGIYPDVVTYNLLIGAACNFGRIHFALRLYDEMLRRGYE 516

Query: 476 VDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDI 535
            D+  Y  LIR FC +  V  A+ L   +Q +G+  D   +  L   Y R   P    D+
Sbjct: 517 PDIITYTELIRGFCIRGHVMEAEELLAKLQRSGLSIDHAPFQILIQKYCRTRVPGRAYDL 576



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 115/382 (30%), Positives = 184/382 (48%), Gaps = 7/382 (1%)

Query: 167 ACTVLLNSLA-KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCE 225
            C  ++ +L  + +L   +W +  KM+Q GV+ ++  +N L++  CK+ D++K + L+ E
Sbjct: 133 GCVAMIRNLCLEGKLRAALW-LRNKMIQKGVIPDVLTHNYLVNGLCKAGDLEKADNLVRE 191

Query: 226 MEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGR 285
           M       +  T+NT I  YC      +AL +   M   GI P+ VTYN LIH  C++G 
Sbjct: 192 MLEIGPSPNCATFNTFIKGYCLNNNVDKALYLFSTMANSGIGPNKVTYNILIHALCKKGL 251

Query: 286 MREARRLFR-----DIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVT 340
           +++AR+L       D    T + +T T  +DG  +  D+ +AL   + M  +G    VV 
Sbjct: 252 LKDARKLLEKILDDDCGKETSDIITSTIFMDGCLKKGDMVQALVHWDEMLQRGTQIDVVA 311

Query: 341 YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML 400
           YN ++   C    +  A R   EM ++ + PD  T NTLI+ +CKIG+   A  +   M 
Sbjct: 312 YNVLIHGFCLIQDMNSAYRYFCEMFKRGLLPDIFTYNTLISGFCKIGNLDEACYIHGVMS 371

Query: 401 EAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEE 460
           + G   D  +YK +I G C   ++  A + L  ML+    P    ++ ++DG+    +  
Sbjct: 372 KMGAAPDLISYKMIIQGLCIHGDVIRANQFLVCMLENLMVPEPLIWNVVIDGHGRHGDLS 431

Query: 461 ALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLA 520
             L + D+ VS G+  +V  Y ALI    K   +  A  +   M  NGI  D V Y  L 
Sbjct: 432 NALSIRDQMVSFGIPPNVFTYNALIHAQIKGGNIVDAHSIKKEMLLNGIYPDVVTYNLLI 491

Query: 521 YAYWRAGEPKACSDILDDMYRR 542
            A    G       + D+M RR
Sbjct: 492 GAACNFGRIHFALRLYDEMLRR 513



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 96/350 (27%), Positives = 172/350 (49%), Gaps = 8/350 (2%)

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNH 303
           C +G    AL ++++M ++G+ PD++T+N L++G C+ G + +A  L R++   G +PN 
Sbjct: 142 CLEGKLRAALWLRNKMIQKGVIPDVLTHNYLVNGLCKAGDLEKADNLVREMLEIGPSPNC 201

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
            T+ T I GYC  N++++AL L   MA  G+ P  VTYN ++  LCK+G ++DA +LL +
Sbjct: 202 ATFNTFIKGYCLNNNVDKALYLFSTMANSGIGPNKVTYNILIHALCKKGLLKDARKLLEK 261

Query: 364 MNEK---KIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCK 420
           + +    K   D +T    ++   K GD   A+   + ML+ G  +D   Y  LIHGFC 
Sbjct: 262 ILDDDCGKETSDIITSTIFMDGCLKKGDMVQALVHWDEMLQRGTQIDVVAYNVLIHGFCL 321

Query: 421 AKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSV 480
            ++M+ A      M   G  P   +Y+ L+ G+C   N +    +       G   D+  
Sbjct: 322 IQDMNSAYRYFCEMFKRGLLPDIFTYNTLISGFCKIGNLDEACYIHGVMSKMGAAPDLIS 381

Query: 481 YRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMY 540
           Y+ +I+  C    V  A +    M  N ++ + +I+  +   + R G+      I D M 
Sbjct: 382 YKMIIQGLCIHGDVIRANQFLVCMLENLMVPEPLIWNVVIDGHGRHGDLSNALSIRDQMV 441

Query: 541 RRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKEMQLRN 590
              +   +  Y +   +  K   I+D   +H + + ++   I+ ++   N
Sbjct: 442 SFGIPPNVFTYNALIHAQIKGGNIVD---AHSIKKEMLLNGIYPDVVTYN 488



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 99/376 (26%), Positives = 157/376 (41%), Gaps = 57/376 (15%)

Query: 84  MIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANL 143
           +IH L K    K A+ +LEKI                 + DD    +  +    IF    
Sbjct: 242 LIHALCKKGLLKDARKLLEKI-----------------LDDDCGKETSDIITSTIFMDGC 284

Query: 144 KMTQDGLQV---FDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANI 200
               D +Q    +D+M        + A  VL++     +  +  ++ + +M + G++ +I
Sbjct: 285 LKKGDMVQALVHWDEMLQRGTQIDVVAYNVLIHGFCLIQDMNSAYRYFCEMFKRGLLPDI 344

Query: 201 HLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDR 260
             YN LI   CK  ++D                                   EA  +   
Sbjct: 345 FTYNTLISGFCKIGNLD-----------------------------------EACYIHGV 369

Query: 261 MEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRAND 318
           M + G +PD+++Y  +I G C  G +  A +    +      P  + +  +IDG+ R  D
Sbjct: 370 MSKMGAAPDLISYKMIIQGLCIHGDVIRANQFLVCMLENLMVPEPLIWNVVIDGHGRHGD 429

Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT 378
           L  AL +R+ M + G+ P V TYN+++    K G I DA+ +  EM    I PD VT N 
Sbjct: 430 LSNALSIRDQMVSFGIPPNVFTYNALIHAQIKGGNIVDAHSIKKEMLLNGIYPDVVTYNL 489

Query: 379 LINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAG 438
           LI A C  G    A+++ + ML  G   D  TY  LI GFC    +  A+ELL  +  +G
Sbjct: 490 LIGAACNFGRIHFALRLYDEMLRRGYEPDIITYTELIRGFCIRGHVMEAEELLAKLQRSG 549

Query: 439 FSPSYCSYSWLVDGYC 454
            S  +  +  L+  YC
Sbjct: 550 LSIDHAPFQILIQKYC 565



 Score = 75.1 bits (183), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 72/138 (52%)

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
           +N   +  D   C  +I   C  G   +A+ ++N+M++ G++ D  T+  L++G CKA +
Sbjct: 122 LNGCTLEMDYTGCVAMIRNLCLEGKLRAALWLRNKMIQKGVIPDVLTHNYLVNGLCKAGD 181

Query: 424 MDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRA 483
           ++ A  L+  ML+ G SP+  +++  + GYC  NN +  L L     + G+  +   Y  
Sbjct: 182 LEKADNLVREMLEIGPSPNCATFNTFIKGYCLNNNVDKALYLFSTMANSGIGPNKVTYNI 241

Query: 484 LIRRFCKKEKVDYAQRLF 501
           LI   CKK  +  A++L 
Sbjct: 242 LIHALCKKGLLKDARKLL 259


>gi|15231438|ref|NP_187385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75204605|sp|Q9SFV9.1|PP218_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g07290, mitochondrial; Flags: Precursor
 gi|6642636|gb|AAF20217.1|AC012395_4 hypothetical protein [Arabidopsis thaliana]
 gi|332641002|gb|AEE74523.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 880

 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 128/530 (24%), Positives = 230/530 (43%), Gaps = 29/530 (5%)

Query: 62  AFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIA---------------- 105
           A+  +       +   +  + T+++ L KN + ++A+  + KI                 
Sbjct: 179 AYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLL 238

Query: 106 -------LRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRV 158
                  LRD L    V++  V        NS   S L+     +   ++   + DQM  
Sbjct: 239 GFCRGLNLRDALKVFDVMSKEVTCAP----NSVSYSILIHGLCEVGRLEEAFGLKDQMGE 294

Query: 159 HNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDK 218
               P     TVL+ +L    L D  + ++ +M+  G   N+H Y VLI   C+   +++
Sbjct: 295 KGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEE 354

Query: 219 VEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIH 278
              +  +M    +   + TYN LI  YCK G    A  +   ME+    P++ T+N L+ 
Sbjct: 355 ANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELME 414

Query: 279 GFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYP 336
           G CR G+  +A  L + +   G +P+ V+Y  LIDG CR   +  A +L   M    + P
Sbjct: 415 GLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEP 474

Query: 337 GVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVK 396
             +T+ +I+   CK+G+   A+  L  M  K I+ D VT  TLI+  CK+G T  A+ + 
Sbjct: 475 DCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFIL 534

Query: 397 NRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNK 456
             +++  ++    +   ++    K  ++     +L  +   G  PS  +Y+ LVDG    
Sbjct: 535 ETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRS 594

Query: 457 NNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIY 516
            +     ++L+     G   +V  Y  +I   C+  +V+ A++L + MQ +G+  + V Y
Sbjct: 595 GDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTY 654

Query: 517 TSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
           T +   Y   G+     + +  M  R   +  +IY S    +    + +D
Sbjct: 655 TVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGID 704



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 123/399 (30%), Positives = 194/399 (48%), Gaps = 4/399 (1%)

Query: 153 FDQMR-VHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           FD++R V     +    + LL SLAK  L  + +  Y++M   G V  +  Y  +++A C
Sbjct: 147 FDELREVFGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALC 206

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMERE-GISPDI 270
           K+   +  E  + ++       D     +L+  +C+     +AL V D M +E   +P+ 
Sbjct: 207 KNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNS 266

Query: 271 VTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
           V+Y+ LIHG C  GR+ EA  L   +  KG  P+  TYT LI   C    +++A  L + 
Sbjct: 267 VSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDE 326

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M  +G  P V TY  ++  LC++G+I +AN +  +M + +I P  +T N LIN YCK G 
Sbjct: 327 MIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGR 386

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
              A ++   M +     +  T+  L+ G C+  +   A  LL  MLD G SP   SY+ 
Sbjct: 387 VVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNV 446

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG 508
           L+DG C + +     KLL       +  D   + A+I  FCK+ K D A     LM   G
Sbjct: 447 LIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKG 506

Query: 509 ILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMIT 547
           I  D V  T+L     + G+ +    IL+ + + R++ T
Sbjct: 507 ISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTT 545



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 75/331 (22%), Positives = 151/331 (45%), Gaps = 21/331 (6%)

Query: 169 TVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEF 228
           T L++ + K   T     + + +V++ ++   H  NV++    K   V +   +L ++  
Sbjct: 515 TTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINK 574

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
             +   + TY TL+    + G    +  + + M+  G  P++  Y  +I+G C+ GR+ E
Sbjct: 575 LGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEE 634

Query: 289 ARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILR 346
           A +L   ++  G +PNHVTYT ++ GY     L+ AL     M  +G       Y+S+L+
Sbjct: 635 AEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQ 694

Query: 347 K--LCKEGRIRDANRLLNEMNEKKIAPDNVT----------------CNTLINAYCKIGD 388
              L ++G        ++++  ++  P+ +                 C  L+   CK G 
Sbjct: 695 GFVLSQKGIDNSEESTVSDIALRETDPECINELISVVEQLGGCISGLCIFLVTRLCKEGR 754

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
           T  +  +   +LE G+ L++     ++  +C  K+     EL+  +L +GF PS+ S+  
Sbjct: 755 TDESNDLVQNVLERGVFLEK-AMDIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCL 813

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
           ++ G   + + E   +L+ E ++    V+ S
Sbjct: 814 VIQGLKKEGDAERARELVMELLTSNGVVEKS 844



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 104/246 (42%), Gaps = 4/246 (1%)

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
            LREV   +  YP    Y+S+L  L K      A      M         +   T++NA 
Sbjct: 149 ELREVFGFRLNYP---CYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNAL 205

Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGML-DAGFSPS 442
           CK G T +A    +++L+ G +LD     +L+ GFC+   +  A ++   M  +   +P+
Sbjct: 206 CKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPN 265

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             SYS L+ G C     E    L D+   +G       Y  LI+  C +  +D A  LF+
Sbjct: 266 SVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFD 325

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDN 562
            M   G   +   YT L     R G+ +  + +   M + R+  ++  Y +    Y KD 
Sbjct: 326 EMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDG 385

Query: 563 EILDLF 568
            ++  F
Sbjct: 386 RVVPAF 391


>gi|255556711|ref|XP_002519389.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541456|gb|EEF43006.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 634

 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 112/396 (28%), Positives = 197/396 (49%), Gaps = 19/396 (4%)

Query: 185 WKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIAL 244
           + V ++M+  G + +   Y+ +I   C +S V+K  +L  EM+   +  D++TY TL+  
Sbjct: 107 YNVIREMMSKGFIPDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDR 166

Query: 245 YCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPN 302
           +CK G+  +A    D M+++G +P++VTY +LIH + +  ++  A  +F  +   G  PN
Sbjct: 167 FCKVGLIEQARNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPN 226

Query: 303 HVTYTTLIDGYCRANDLEEALRLREVMAAKGV-----------------YPGVVTYNSIL 345
            VTYT LIDG+C+A + E+A ++   M    V                  P VVTY +++
Sbjct: 227 IVTYTALIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALV 286

Query: 346 RKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLM 405
             LCK  ++++A  LL  M+ +   P+ +  + LI+ +CK+G    A +V  +ML  G  
Sbjct: 287 DGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCS 346

Query: 406 LDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKL 465
            + +TY +LI    K K +D+A ++L  ML+   +P+   Y+ +VDG C     +   +L
Sbjct: 347 PNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRL 406

Query: 466 LDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWR 525
           +     +G   +V  Y A+I  F K  +VD    L  LM   G   + + Y  L      
Sbjct: 407 MLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCA 466

Query: 526 AGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKD 561
           AG       +L++M +      + +YR     ++ +
Sbjct: 467 AGLLDDAHKLLEEMKQTYWPKHIGMYRKVIEGFSHE 502



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 185/382 (48%), Gaps = 21/382 (5%)

Query: 126 PDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVW 185
           PD +++  S ++ +  N    +   Q+F +M+ + + P ++  T LL+   K  L +   
Sbjct: 120 PDSSTY--SKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQAR 177

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
             + +M Q G   N+  Y  LIHA  K+  + +  ++   M       ++ TY  LI  +
Sbjct: 178 NWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGH 237

Query: 246 CKKGMHYEALAVQDRMEREGI-----------------SPDIVTYNSLIHGFCREGRMRE 288
           CK G   +A  +  RM+ + +                  P++VTY +L+ G C+  +++E
Sbjct: 238 CKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKE 297

Query: 289 ARRLFR--DIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILR 346
           AR L     ++G  PN + Y  LIDG+C+   L+EA  +   M   G  P V TY+S++ 
Sbjct: 298 ARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLID 357

Query: 347 KLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLML 406
           KL K+ R+  A ++L +M E   AP+ V    +++  CK+G T  A ++   M E G   
Sbjct: 358 KLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYP 417

Query: 407 DQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLL 466
           +  TY A+I GF KA  +D   ELL  M   G +P++ +Y  L++  C     +   KLL
Sbjct: 418 NVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLL 477

Query: 467 DEFVSRGLCVDVSVYRALIRRF 488
           +E         + +YR +I  F
Sbjct: 478 EEMKQTYWPKHIGMYRKVIEGF 499



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 113/387 (29%), Positives = 180/387 (46%), Gaps = 21/387 (5%)

Query: 186 KVYKKMVQLGVVAN-IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIAL 244
           + Y +M+++GVV N +++ N     CC     +K   ++ EM  K    D  TY+ +I  
Sbjct: 73  RAYNEMLEMGVVLNKVNVCNFTRCLCCIGK-FEKAYNVIREMMSKGFIPDSSTYSKVIGY 131

Query: 245 YCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPN 302
            C      +A  +   M+R GI+PD+ TY +L+  FC+ G + +AR  F +++  G  PN
Sbjct: 132 LCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQQDGCAPN 191

Query: 303 HVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLN 362
            VTYT LI  Y +   L  A  + E+M + G  P +VTY +++   CK G    A ++  
Sbjct: 192 VVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEKACQIYA 251

Query: 363 EMNEKKI-----------------APDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLM 405
            M   K+                  P+ VT   L++  CK      A  +   M   G  
Sbjct: 252 RMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLETMSLEGCE 311

Query: 406 LDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKL 465
            +Q  Y ALI GFCK  ++D A+E+   ML  G SP+  +YS L+D        +  LK+
Sbjct: 312 PNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKV 371

Query: 466 LDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWR 525
           L + +      +V +Y  ++   CK  K D A RL  +M+  G   + V YT++   + +
Sbjct: 372 LTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGK 431

Query: 526 AGEPKACSDILDDMYRRRLMITLKIYR 552
           AG    C ++L  M  +        YR
Sbjct: 432 AGRVDRCLELLQLMTSKGCAPNFITYR 458



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 106/354 (29%), Positives = 164/354 (46%), Gaps = 25/354 (7%)

Query: 191 MVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKG- 249
           M+  G   +  ++N L+HA C+S D     KLL +M     +     YN LI   C    
Sbjct: 2   MITEGCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTED 61

Query: 250 -MHYEALAVQDRMERE----GISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPN 302
               E + + +R   E    G+  + V   +     C  G+  +A  + R++  KG  P+
Sbjct: 62  LPSMEVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPD 121

Query: 303 HVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLN 362
             TY+ +I   C A+ +E+A +L + M   G+ P V TY ++L + CK G I  A    +
Sbjct: 122 SSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFD 181

Query: 363 EMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAK 422
           EM +   AP+ VT   LI+AY K    + A ++   ML  G + +  TY ALI G CKA 
Sbjct: 182 EMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAG 241

Query: 423 EMDIA----------------KELLFGMLDAGF-SPSYCSYSWLVDGYCNKNNEEALLKL 465
           E + A                 ++ F ++D+    P+  +Y  LVDG C  +  +    L
Sbjct: 242 ETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDL 301

Query: 466 LDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
           L+     G   +  +Y ALI  FCK  K+D AQ +F  M G+G   +   Y+SL
Sbjct: 302 LETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSL 355



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 91/355 (25%), Positives = 146/355 (41%), Gaps = 26/355 (7%)

Query: 238 YNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE------ARR 291
           +N+L+  YC+ G ++ A  +  +M   G  P  V YN LI G C    +        A R
Sbjct: 14  FNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTEDLPSMEVIGLAER 73

Query: 292 LFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLC 349
            + ++   G   N V         C     E+A  +   M +KG  P   TY+ ++  LC
Sbjct: 74  AYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPDSSTYSKVIGYLC 133

Query: 350 KEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQF 409
              ++  A +L  EM    I PD  T  TL++ +CK+G    A    + M + G   +  
Sbjct: 134 NASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQQDGCAPNVV 193

Query: 410 TYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEF 469
           TY ALIH + K +++  A E+   ML  G  P+  +Y+ L+DG+C     E   ++    
Sbjct: 194 TYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEKACQIYARM 253

Query: 470 VSRGLCV-----------------DVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGD 512
            +  + +                 +V  Y AL+   CK  KV  A+ L   M   G   +
Sbjct: 254 KNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPN 313

Query: 513 SVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDL 567
            +IY +L   + + G+     ++   M        +  Y S      KD   LDL
Sbjct: 314 QIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKR-LDL 367



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 83/296 (28%), Positives = 129/296 (43%), Gaps = 10/296 (3%)

Query: 297 KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRD 356
           +G  P+ + + +L+  YCR+ D   A +L + M   G  PG V YN ++  +C    +  
Sbjct: 5   EGCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTEDLPS 64

Query: 357 ------ANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
                 A R  NEM E  +  + V         C IG    A  V   M+  G + D  T
Sbjct: 65  MEVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPDSST 124

Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFV 470
           Y  +I   C A +++ A +L   M   G +P   +Y+ L+D +C     E      DE  
Sbjct: 125 YSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQ 184

Query: 471 SRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPK 530
             G   +V  Y ALI  + K  K+  A  +F +M  NG + + V YT+L   + +AGE +
Sbjct: 185 QDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETE 244

Query: 531 ACSDILDDMYRRRLMIT-LKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKE 585
               I   M   ++ I  + IY     S  K+  ++   +  +VD GL   H  KE
Sbjct: 245 KACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVT--YGALVD-GLCKAHKVKE 297



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 65/242 (26%), Positives = 108/242 (44%), Gaps = 6/242 (2%)

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
           +M  +G YP  + +NS++   C+ G    A +LL +M      P  V  N LI   C   
Sbjct: 1   MMITEGCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTE 60

Query: 388 DTAS------AMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
           D  S      A +  N MLE G++L++          C   + + A  ++  M+  GF P
Sbjct: 61  DLPSMEVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIP 120

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
              +YS ++   CN +  E   +L  E    G+  DV  Y  L+ RFCK   ++ A+  F
Sbjct: 121 DSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWF 180

Query: 502 NLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKD 561
           + MQ +G   + V YT+L +AY +  +    ++I + M     +  +  Y +    + K 
Sbjct: 181 DEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKA 240

Query: 562 NE 563
            E
Sbjct: 241 GE 242



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 84/386 (21%), Positives = 158/386 (40%), Gaps = 66/386 (17%)

Query: 56  IPSLSCAFFKWAESAV--PNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTP 113
           IP +   +F+  +S +  PN    + ++  ++  L K    K A+++LE ++L       
Sbjct: 260 IPDVD-IYFRIVDSELKEPN----VVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQ 314

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
            + +AL+      DG           +  +    +  +VF +M  H   P+++  + L++
Sbjct: 315 IIYDALI------DG-----------FCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLID 357

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
            L KD+  D+  KV  KM++     N+ +Y  ++   CK    D+  +L+  ME K    
Sbjct: 358 KLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYP 417

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIH--------------- 278
           ++ TY  +I  + K G     L +   M  +G +P+ +TY  LI+               
Sbjct: 418 NVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLL 477

Query: 279 --------------------GFCRE--GRMREARRLFRDIKGATPNHVTYTTLIDGYCRA 316
                               GF  E    +     L  D  G+ P    Y  LID + +A
Sbjct: 478 EEMKQTYWPKHIGMYRKVIEGFSHEFVASLGLLAELSED--GSVPILPVYKLLIDNFIKA 535

Query: 317 NDLEEALRLREVMAA-KGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVT 375
             LE AL L E +++    Y    TY S++  L    ++  A +L ++M  +   P+   
Sbjct: 536 GRLEMALELHEELSSFSAAYQN--TYVSLIESLTLACKVDKAFKLYSDMTRRGFVPELSM 593

Query: 376 CNTLINAYCKIGDTASAMKVKNRMLE 401
              LI    ++G    A+++ + + +
Sbjct: 594 LVCLIKGLLRVGKWEEALQLSDSICQ 619


>gi|357475985|ref|XP_003608278.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124359684|gb|ABD32353.2| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355509333|gb|AES90475.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 870

 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 126/497 (25%), Positives = 218/497 (43%), Gaps = 67/497 (13%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           ++FD+M      P+     +L+    +   T    +      ++G   N  +YN L+ + 
Sbjct: 172 ELFDKMSEKGCQPNKFTVGILVRGFCRAGRTKQALEFVDG--KMGGNVNRVVYNTLVSSF 229

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG----I 266
           CK    D+ EKL+  M  K +  D+ T+N+ I+  C+ G  +EA  +   M+ +G     
Sbjct: 230 CKQDMNDEAEKLVERMTEKGLLPDVVTFNSRISALCRAGKVFEASRIFRDMQMDGELGLP 289

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDIK----------------------------- 297
            P++VT+N ++ GFC+EG M EAR L   +K                             
Sbjct: 290 KPNVVTFNLMLKGFCQEGMMEEARSLVETMKKGGNFVSLESYNTWLLGLLRNGKLLEGRS 349

Query: 298 --------GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLC 349
                   G  PN  +Y  ++DG CR + + +A RL ++M + GVYP  VTY ++L   C
Sbjct: 350 VLDEMVENGIEPNIYSYNIVMDGLCRNHMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYC 409

Query: 350 KEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQF 409
            +G++ +A  +LNEM  K   P+  TCNTL+N+  K G  + A ++  +M E    LD  
Sbjct: 410 SKGKVFEAKAILNEMIRKGCHPNTYTCNTLLNSLWKEGRKSEAEEMLQKMNEKSYQLDTV 469

Query: 410 TYKALIHGFCKAKEMDIAKELLFGMLDAGFS----------------------PSYCSYS 447
           T   +++G C+  E++ A E++  M   G +                      P   +Y+
Sbjct: 470 TCNIVVNGLCRNGELEKASEVVSEMWTDGTNSLGKENPVAGLVNSIHNVSTNVPDVITYT 529

Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGN 507
            L++G C     E   K   E +++ L  D   Y   +  FCK+ K+  A R+   M+ N
Sbjct: 530 TLINGLCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLNFCKQGKISSALRVLKDMERN 589

Query: 508 GILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDL 567
           G       Y SL       G+      ++D+M  R +   +  Y +      +  +  D 
Sbjct: 590 GCSKTLQTYNSLILGLGSKGQIFEMYGLMDEMRERGIHPDICTYNNMINCLCEGGKTKDA 649

Query: 568 --FWSHVVDRGLMSKHI 582
                 ++D+G++S ++
Sbjct: 650 TSLLHEMLDKGVVSPNV 666



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 122/492 (24%), Positives = 206/492 (41%), Gaps = 97/492 (19%)

Query: 173 NSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVR 232
           +SL ++R    V  +Y  M+Q GV    + +N+LI + C+S+ +D   +L  +M  K  +
Sbjct: 125 SSLQQNR-PHYVTSLYTDMIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQ 183

Query: 233 ADLFT---------------------------------YNTLIALYCKKGMHYEALAVQD 259
            + FT                                 YNTL++ +CK+ M+ EA  + +
Sbjct: 184 PNKFTVGILVRGFCRAGRTKQALEFVDGKMGGNVNRVVYNTLVSSFCKQDMNDEAEKLVE 243

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKG------ATPNHVTYTTLIDGY 313
           RM  +G+ PD+VT+NS I   CR G++ EA R+FRD++         PN VT+  ++ G+
Sbjct: 244 RMTEKGLLPDVVTFNSRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGF 303

Query: 314 CRANDLEEALRLREV-----------------------------------MAAKGVYPGV 338
           C+   +EEA  L E                                    M   G+ P +
Sbjct: 304 CQEGMMEEARSLVETMKKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNI 363

Query: 339 VTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNR 398
            +YN ++  LC+   + DA RL++ M    + PD VT  TL++ YC  G    A  + N 
Sbjct: 364 YSYNIVMDGLCRNHMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNE 423

Query: 399 MLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNN 458
           M+  G   + +T   L++   K      A+E+L  M +  +     + + +V+G C    
Sbjct: 424 MIRKGCHPNTYTCNTLLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGE 483

Query: 459 EEALLKLLDEFVSRGL----------------------CVDVSVYRALIRRFCKKEKVDY 496
            E   +++ E  + G                         DV  Y  LI   CK  K++ 
Sbjct: 484 LEKASEVVSEMWTDGTNSLGKENPVAGLVNSIHNVSTNVPDVITYTTLINGLCKVGKLEE 543

Query: 497 AQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSA 556
           A++ F  M    +  DSV Y +    + + G+  +   +L DM R     TL+ Y S   
Sbjct: 544 AKKKFIEMMAKNLHPDSVTYDTFVLNFCKQGKISSALRVLKDMERNGCSKTLQTYNSLIL 603

Query: 557 SYAKDNEILDLF 568
                 +I +++
Sbjct: 604 GLGSKGQIFEMY 615



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 100/386 (25%), Positives = 175/386 (45%), Gaps = 40/386 (10%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKD----RLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           + ++M      P+ + C  LLNSL K+       +M+ K+ +K  QL  V      N+++
Sbjct: 420 ILNEMIRKGCHPNTYTCNTLLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVT----CNIVV 475

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRA----------------------DLFTYNTLIALY 245
           +  C++ +++K  +++ EM      +                      D+ TY TLI   
Sbjct: 476 NGLCRNGELEKASEVVSEMWTDGTNSLGKENPVAGLVNSIHNVSTNVPDVITYTTLINGL 535

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNH 303
           CK G   EA      M  + + PD VTY++ +  FC++G++  A R+ +D++  G +   
Sbjct: 536 CKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLNFCKQGKISSALRVLKDMERNGCSKTL 595

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
            TY +LI G      + E   L + M  +G++P + TYN+++  LC+ G+ +DA  LL+E
Sbjct: 596 QTYNSLILGLGSKGQIFEMYGLMDEMRERGIHPDICTYNNMINCLCEGGKTKDATSLLHE 655

Query: 364 MNEKKIAPDNVTC-NTLINAYCKIGDTASAMKVKNRMLEAGLML---DQFTYKALIHGFC 419
           M +K +   NV+    LI A+CK GD     KV   + +  L +    +  Y  + +   
Sbjct: 656 MLDKGVVSPNVSSFKILIKAFCKSGD----FKVACELFDVALSVCGHKEALYSLMFNELL 711

Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
              ++  AKEL    L+         Y  L+D  C     +    LL + + +G C D S
Sbjct: 712 AGGKLSDAKELFEASLERSLLSKNFMYEDLIDKLCKDGRLDDAHGLLQKLIDKGYCFDHS 771

Query: 480 VYRALIRRFCKKEKVDYAQRLFNLMQ 505
            +  +I    K+     A  L  +M+
Sbjct: 772 SFIPVIDGLSKRGNKQQADELGRIME 797


>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
 gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
          Length = 375

 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 105/374 (28%), Positives = 186/374 (49%), Gaps = 37/374 (9%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           ++V D+       P +   T+L+ +   +       K+  +M   G   ++  YNVL++ 
Sbjct: 1   MEVLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNG 60

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
            CK   +D+  K L  M     + ++ T+N ++   C  G   +A  +   M R+G SP 
Sbjct: 61  MCKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPS 120

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLRE 327
           +VT+N LI+  CR+G +  A  +   +   G TPN ++Y  L+ G+C+   ++ A++  E
Sbjct: 121 VVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLE 180

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
           +M ++G YP +VTYN++L  LCK+G++  A  LLN+++ K  +P  +T NT+I+   K+G
Sbjct: 181 IMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVG 240

Query: 388 DTASAMKVKNRMLEAGLMLD-----------------------------------QFTYK 412
            T  A+++ + M   GL  D                                    FTY 
Sbjct: 241 KTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYN 300

Query: 413 ALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSR 472
           +++ G CKA++ D A + L  M+  G  P+  SY+ L++G  N+   +  L+LL+E  SR
Sbjct: 301 SIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSR 360

Query: 473 GLCVDVSVYRALIR 486
           G+    S  + ++R
Sbjct: 361 GVVKKSSAEQVVVR 374



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 93/276 (33%), Positives = 144/276 (52%), Gaps = 2/276 (0%)

Query: 255 LAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDG 312
           + V DR   +   PD++TY  LI   C E  + +A +L  ++  +G  P+ VTY  L++G
Sbjct: 1   MEVLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNG 60

Query: 313 YCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPD 372
            C+   L+EA++    M + G  P V+T+N ILR +C  GR  DA +LL EM  K  +P 
Sbjct: 61  MCKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPS 120

Query: 373 NVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLF 432
            VT N LIN  C+ G    A+ +  +M   G   +  +Y  L+HGFCK K+MD A + L 
Sbjct: 121 VVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLE 180

Query: 433 GMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKE 492
            M+  G  P   +Y+ ++   C     +A ++LL++  S+G    +  Y  +I    K  
Sbjct: 181 IMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVG 240

Query: 493 KVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
           K D A  L + M+G G+  D + Y+SL     R G+
Sbjct: 241 KTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGK 276



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 102/366 (27%), Positives = 179/366 (48%), Gaps = 6/366 (1%)

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
           K+   D+ TY  LI   C +    +A+ + D M   G  PD+VTYN L++G C+EGR+ E
Sbjct: 10  KECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDE 69

Query: 289 ARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILR 346
           A +    +   G+ PN +T+  ++   C      +A +L   M  KG  P VVT+N ++ 
Sbjct: 70  AIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILIN 129

Query: 347 KLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLML 406
            LC++G +  A  +L +M      P++++ N L++ +CK      A++    M+  G   
Sbjct: 130 FLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYP 189

Query: 407 DQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLL 466
           D  TY  ++   CK  ++D A ELL  +   G SP   +Y+ ++DG       +  ++LL
Sbjct: 190 DIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELL 249

Query: 467 DEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRA 526
            E   +GL  DV  Y +LI    ++ KV+ A + F+ ++G G+  ++  Y S+ +   +A
Sbjct: 250 HEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKA 309

Query: 527 GEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDN---EILDLFWSHVVDRGLMSKHIF 583
            +     D L  M  +    T   Y       A +    E L+L  + +  RG++ K   
Sbjct: 310 QQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELL-NELCSRGVVKKSSA 368

Query: 584 KEMQLR 589
           +++ +R
Sbjct: 369 EQVVVR 374



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 83/294 (28%), Positives = 140/294 (47%), Gaps = 11/294 (3%)

Query: 85  IHILTKNKHFKSAQNMLE-KIALRDFLST------PSVLNALVKIHDDPDGNSHVLSWLV 137
           I  L     + S  N++   I LR   ST        +L  +V+    P  +    + L+
Sbjct: 71  IKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSP--SVVTFNILI 128

Query: 138 IFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVV 197
            F     +    + + ++M  H   P+  +   LL+   K++  D   +  + MV  G  
Sbjct: 129 NFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCY 188

Query: 198 ANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAV 257
            +I  YN ++ A CK   VD   +LL ++  K     L TYNT+I    K G   +A+ +
Sbjct: 189 PDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVEL 248

Query: 258 QDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCR 315
              M  +G+ PD++TY+SLI G  REG++ EA + F D++  G  PN  TY +++ G C+
Sbjct: 249 LHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCK 308

Query: 316 ANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI 369
           A   + A+     M +KG  P  V+Y  ++  +  EG  ++A  LLNE+  + +
Sbjct: 309 AQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSRGV 362



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 124/260 (47%), Gaps = 2/260 (0%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D  ++  +M      P +    +L+N L +  L      + +KM   G   N   YN L+
Sbjct: 104 DAEKLLTEMVRKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLL 163

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           H  CK   +D+  + L  M  +    D+ TYNT++   CK G    A+ + +++  +G S
Sbjct: 164 HGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCS 223

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
           P ++TYN++I G  + G+  +A  L  ++  KG  P+ +TY++LI G  R   +EEA++ 
Sbjct: 224 PVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKF 283

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
              +   GV P   TYNSI+  LCK  +   A   L  M  K   P  V+   LI     
Sbjct: 284 FHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIAN 343

Query: 386 IGDTASAMKVKNRMLEAGLM 405
            G    A+++ N +   G++
Sbjct: 344 EGLAKEALELLNELCSRGVV 363



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 52/206 (25%), Positives = 87/206 (42%)

Query: 359 RLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGF 418
            +L+   EK+  PD +T   LI A C       AMK+ + M   G   D  TY  L++G 
Sbjct: 2   EVLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGM 61

Query: 419 CKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDV 478
           CK   +D A + L  M   G  P+  +++ ++   C+        KLL E V +G    V
Sbjct: 62  CKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSV 121

Query: 479 SVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDD 538
             +  LI   C+K  +  A  +   M  +G   +S+ Y  L + + +  +       L+ 
Sbjct: 122 VTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEI 181

Query: 539 MYRRRLMITLKIYRSFSASYAKDNEI 564
           M  R     +  Y +   +  KD ++
Sbjct: 182 MVSRGCYPDIVTYNTMLTALCKDGKV 207


>gi|356529360|ref|XP_003533262.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 124/419 (29%), Positives = 207/419 (49%), Gaps = 9/419 (2%)

Query: 118 ALVKI-HDDPDGNSHV--LSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNS 174
           +L+KI H   DG++ V  L+  +    +++ T  G  V   M    L P L     ++N 
Sbjct: 95  SLIKILHSLGDGSADVCTLNIAINCLCHMRKTTLGFAVLGLMTKIGLEPTLVTLNTIVNG 154

Query: 175 LAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRAD 234
           L  +   +    + +KM  LG   N   Y  L++  CK  D     + L +M  +++  +
Sbjct: 155 LCIEGDVNHALWLVEKMENLGYHCNARTYGALVNGLCKIGDTSGALECLKKMVKRNLGPN 214

Query: 235 LFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCRE-GRMREARRLF 293
           +  YN ++   CK+G+  EAL +   M    + P++VTYN LI G C E G  RE   LF
Sbjct: 215 VVVYNAILDGLCKRGLVGEALGLLHEMGVVNVEPNVVTYNCLIQGLCGEFGGWREGVGLF 274

Query: 294 RDI---KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
            ++   KG  P+  T++ L+DG+C+   L  A  +   M   GV P VVTYNS++   C 
Sbjct: 275 NEMVAEKGIVPDVQTFSILVDGFCKEGLLLRAESVVGFMVRIGVEPNVVTYNSLIAGYCL 334

Query: 351 EGRIRDANRLLNEM--NEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ 408
             ++ +A R+   M    +   P  VT N+LI+ +CK+ +   AM + + M+  GL  D 
Sbjct: 335 RSQMEEAMRVFGLMVREGEGCLPSVVTHNSLIHGWCKVKEVDKAMSLLSEMVGKGLDPDV 394

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
           FT+ +LI GFC+ K+   A+EL F M + G  P+  + + ++DG      +   + L   
Sbjct: 395 FTWTSLIGGFCEVKKPLAARELFFTMKEHGQVPNLQTCAVVLDGLLKCWLDSEAVTLFRA 454

Query: 469 FVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
            +  GL +D+ +Y  ++   CK  K++ A++L + +   G+  DS  Y  +     R G
Sbjct: 455 MMKSGLDLDIVIYNIMLDGMCKMGKLNDARKLLSCVLVKGLKIDSYTYNIMIKGLCREG 513



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 114/409 (27%), Positives = 183/409 (44%), Gaps = 47/409 (11%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N+     LV     +  T   L+   +M   NL P++     +L+ L K  L      + 
Sbjct: 179 NARTYGALVNGLCKIGDTSGALECLKKMVKRNLGPNVVVYNAILDGLCKRGLVGEALGLL 238

Query: 189 KKMVQLGVVANIHLYNVLIHACCKS-----SDVDKVEKLLCEMEFKDVRADLFTYNTLIA 243
            +M  + V  N+  YN LI   C         V    +++ E   K +  D+ T++ L+ 
Sbjct: 239 HEMGVVNVEPNVVTYNCLIQGLCGEFGGWREGVGLFNEMVAE---KGIVPDVQTFSILVD 295

Query: 244 LYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF----RDIKGA 299
            +CK+G+   A +V   M R G+ P++VTYNSLI G+C   +M EA R+F    R+ +G 
Sbjct: 296 GFCKEGLLLRAESVVGFMVRIGVEPNVVTYNSLIAGYCLRSQMEEAMRVFGLMVREGEGC 355

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
            P+ VT+ +LI G+C+  ++++A+ L   M  KG+ P V T+ S++   C+  +   A  
Sbjct: 356 LPSVVTHNSLIHGWCKVKEVDKAMSLLSEMVGKGLDPDVFTWTSLIGGFCEVKKPLAARE 415

Query: 360 LLNEMNEKKIAPDNVTC-----------------------------------NTLINAYC 384
           L   M E    P+  TC                                   N +++  C
Sbjct: 416 LFFTMKEHGQVPNLQTCAVVLDGLLKCWLDSEAVTLFRAMMKSGLDLDIVIYNIMLDGMC 475

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           K+G    A K+ + +L  GL +D +TY  +I G C+   +D A+ELL  M + G  P+ C
Sbjct: 476 KMGKLNDARKLLSCVLVKGLKIDSYTYNIMIKGLCREGLLDDAEELLRKMKENGCPPNKC 535

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEK 493
           SY+  V G   K +     K L     +G  VD +    LIR     E+
Sbjct: 536 SYNVFVQGLLRKYDIARSRKYLQIMKDKGFPVDATTAELLIRFLSANEE 584



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 85/319 (26%), Positives = 143/319 (44%), Gaps = 41/319 (12%)

Query: 147 QDGLQVFDQMRVH-NLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNV 205
           ++G+ +F++M     ++P +   ++L++   K+ L      V   MV++GV  N+  YN 
Sbjct: 268 REGVGLFNEMVAEKGIVPDVQTFSILVDGFCKEGLLLRAESVVGFMVRIGVEPNVVTYNS 327

Query: 206 LIHACCKSSDVDKVEKLLCEM--EFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER 263
           LI   C  S +++  ++   M  E +     + T+N+LI  +CK     +A+++   M  
Sbjct: 328 LIAGYCLRSQMEEAMRVFGLMVREGEGCLPSVVTHNSLIHGWCKVKEVDKAMSLLSEMVG 387

Query: 264 EGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNH------------------ 303
           +G+ PD+ T+ SLI GFC   +   AR LF  +K  G  PN                   
Sbjct: 388 KGLDPDVFTWTSLIGGFCEVKKPLAARELFFTMKEHGQVPNLQTCAVVLDGLLKCWLDSE 447

Query: 304 -----------------VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILR 346
                            V Y  ++DG C+   L +A +L   +  KG+     TYN +++
Sbjct: 448 AVTLFRAMMKSGLDLDIVIYNIMLDGMCKMGKLNDARKLLSCVLVKGLKIDSYTYNIMIK 507

Query: 347 KLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLML 406
            LC+EG + DA  LL +M E    P+  + N  +    +  D A + K    M + G  +
Sbjct: 508 GLCREGLLDDAEELLRKMKENGCPPNKCSYNVFVQGLLRKYDIARSRKYLQIMKDKGFPV 567

Query: 407 DQFTYKALIHGFCKAKEMD 425
           D  T + LI  F  A E D
Sbjct: 568 DATTAELLIR-FLSANEED 585


>gi|242063942|ref|XP_002453260.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
 gi|241933091|gb|EES06236.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
          Length = 866

 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 132/500 (26%), Positives = 210/500 (42%), Gaps = 70/500 (14%)

Query: 126 PDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVW 185
           P  N      L   Y     + D L+V D M   NL+     C  ++    K+ L +   
Sbjct: 172 PARNEFSFGILARGYCRAGRSIDALKVLDGMPSMNLV----VCNTVVAGFCKEGLVEEAE 227

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKD-----VRADLFTYNT 240
           ++ ++M   G+  N+  +N  I A CK+  V    ++  +M+ +D      R D  T++ 
Sbjct: 228 RLVERMRVQGLAPNVVTFNARISALCKAGRVLDAYRIFQDMQ-EDWQHGLPRPDQVTFDV 286

Query: 241 LIALYCKKGMHYEALAVQD-----------------------------------RMEREG 265
           +++ +C  G   EA  + D                                    M  EG
Sbjct: 287 MLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAQELLREMAHEG 346

Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRDIKGA--TPNHVTYTTLIDGYCRANDLEEAL 323
           I P+  TYN ++ G C+EG+  +ARR+   I+    +P+ VTYT+L+  YC   ++  A 
Sbjct: 347 IQPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAAN 406

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
           R+ + MA KG  P   TYN +L+ L + GR  +A RLL  MNEK  + D   CN +I+  
Sbjct: 407 RILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMNEKGYSLDTAGCNIIIDGL 466

Query: 384 CKIGDTASAMKVKNRMLEAG-----------------------LMLDQFTYKALIHGFCK 420
           C+      AM + + M E G                        + DQ TY  LI   CK
Sbjct: 467 CRNSRLDVAMDIVDGMWEEGSGALGRLGNSFLSVVSDSSISQRCLPDQITYSILISALCK 526

Query: 421 AKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSV 480
               D AK+ L  M+    SP    Y   + GYC        +K+L +   +G       
Sbjct: 527 EGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKGCNPSTRT 586

Query: 481 YRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMY 540
           Y  LIR F +K K +   +L + M+  GI  + + Y SL  ++ + G       +LD+M 
Sbjct: 587 YNLLIRGFEEKHKSEEIMKLMSEMKEKGISPNVMTYNSLIKSFCQQGMVNKAMPLLDEML 646

Query: 541 RRRLMITLKIYRSFSASYAK 560
           +  L+  +  +     +Y K
Sbjct: 647 QNELVPNITSFDLLIKAYCK 666



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 136/551 (24%), Positives = 246/551 (44%), Gaps = 105/551 (19%)

Query: 126 PDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACT---VLLNSLAKDRLTD 182
           PD + H+L+ L    +++   +  +  F  +R     P         ++L +L + RL D
Sbjct: 71  PDPSPHLLALLSC--SDVLPLRLAIPAFRSLRALTSAPPPTTPVYNRLILAALRESRL-D 127

Query: 183 MVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKD-----------V 231
           +V  +YK ++  G   ++   N+L+ A C +  ++  +++   M  ++            
Sbjct: 128 LVEALYKDLLLSGAQPDVFTRNLLLQALCDAGRMELAQRVFDAMPARNEFSFGILARGYC 187

Query: 232 RA----------------DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNS 275
           RA                +L   NT++A +CK+G+  EA  + +RM  +G++P++VT+N+
Sbjct: 188 RAGRSIDALKVLDGMPSMNLVVCNTVVAGFCKEGLVEEAERLVERMRVQGLAPNVVTFNA 247

Query: 276 LIHGFCREGRMREARRLFRDIKG------ATPNHVTYTTLIDGYCRANDLEEA------- 322
            I   C+ GR+ +A R+F+D++         P+ VT+  ++ G+C A  ++EA       
Sbjct: 248 RISALCKAGRVLDAYRIFQDMQEDWQHGLPRPDQVTFDVMLSGFCDAGFVDEARVLVDIM 307

Query: 323 -----LR------------------------LREVMAAKGVYPGVVTYNSILRKLCKEGR 353
                LR                        LRE MA +G+ P   TYN I+  LCKEG+
Sbjct: 308 RCGGFLRRVESYNRWLSGLVRNGRVGEAQELLRE-MAHEGIQPNSYTYNIIVSGLCKEGK 366

Query: 354 IRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKA 413
             DA R+ N +    ++PD VT  +L++AYC  G+ A+A ++ + M + G   + FTY  
Sbjct: 367 AFDARRVENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNV 426

Query: 414 LIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEF---- 469
           L+    +A     A+ LL  M + G+S      + ++DG C  +  +  + ++D      
Sbjct: 427 LLQSLWRAGRTTEAERLLERMNEKGYSLDTAGCNIIIDGLCRNSRLDVAMDIVDGMWEEG 486

Query: 470 -------------------VSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGIL 510
                              +S+    D   Y  LI   CK+ + D A++    M    I 
Sbjct: 487 SGALGRLGNSFLSVVSDSSISQRCLPDQITYSILISALCKEGRFDEAKKKLLEMIVKDIS 546

Query: 511 GDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIY----RSFSASYAKDNEILD 566
            DSVIY +  + Y + G+      +L DM ++    + + Y    R F   + K  EI+ 
Sbjct: 547 PDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLIRGFEEKH-KSEEIMK 605

Query: 567 LFWSHVVDRGL 577
           L  S + ++G+
Sbjct: 606 LM-SEMKEKGI 615



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 115/423 (27%), Positives = 197/423 (46%), Gaps = 29/423 (6%)

Query: 148 DGLQVFDQMR---VHNL-MPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLY 203
           D  ++F  M+    H L  P      V+L+        D    +   M   G +  +  Y
Sbjct: 260 DAYRIFQDMQEDWQHGLPRPDQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESY 319

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER 263
           N  +    ++  V + ++LL EM  + ++ + +TYN +++  CK+G  ++A  V++ +  
Sbjct: 320 NRWLSGLVRNGRVGEAQELLREMAHEGIQPNSYTYNIIVSGLCKEGKAFDARRVENFIRS 379

Query: 264 EGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEE 321
             +SPD+VTY SL+H +C +G +  A R+  ++  KG  PN  TY  L+    RA    E
Sbjct: 380 GVMSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTE 439

Query: 322 ALRLREVMAAKGVYPGVVTYNSILRKLCKEGRI-------------------RDANRLLN 362
           A RL E M  KG        N I+  LC+  R+                   R  N  L+
Sbjct: 440 AERLLERMNEKGYSLDTAGCNIIIDGLCRNSRLDVAMDIVDGMWEEGSGALGRLGNSFLS 499

Query: 363 EMNEKKIA----PDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGF 418
            +++  I+    PD +T + LI+A CK G    A K    M+   +  D   Y   IHG+
Sbjct: 500 VVSDSSISQRCLPDQITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGY 559

Query: 419 CKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDV 478
           CK  +  +A ++L  M   G +PS  +Y+ L+ G+  K+  E ++KL+ E   +G+  +V
Sbjct: 560 CKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLIRGFEEKHKSEEIMKLMSEMKEKGISPNV 619

Query: 479 SVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDD 538
             Y +LI+ FC++  V+ A  L + M  N ++ +   +  L  AY +  +  +   + D 
Sbjct: 620 MTYNSLIKSFCQQGMVNKAMPLLDEMLQNELVPNITSFDLLIKAYCKITDFPSAQMVFDA 679

Query: 539 MYR 541
             R
Sbjct: 680 ALR 682



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 66/278 (23%), Positives = 125/278 (44%), Gaps = 4/278 (1%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           V D       +P     ++L+++L K+   D   K   +M+   +  +  +Y+  IH  C
Sbjct: 501 VSDSSISQRCLPDQITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYC 560

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           K        K+L +ME K       TYN LI  + +K    E + +   M+ +GISP+++
Sbjct: 561 KHGKTSLAIKVLRDMEKKGCNPSTRTYNLLIRGFEEKHKSEEIMKLMSEMKEKGISPNVM 620

Query: 272 TYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           TYNSLI  FC++G + +A  L  ++      PN  ++  LI  YC+  D   A  + +  
Sbjct: 621 TYNSLIKSFCQQGMVNKAMPLLDEMLQNELVPNITSFDLLIKAYCKITDFPSAQMVFDA- 679

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
           A +      V Y  +  +L   G+  +A  +L    E +++  +     +I+  C++G+ 
Sbjct: 680 ALRTCGQKEVLYCLMCTELTTYGKWIEAKNILEMALEMRVSIQSFPYKQIISGLCEVGEV 739

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFC-KAKEMDI 426
             A  +   ++    + D   +  +I     + K+ D+
Sbjct: 740 DHAHSLLKLLIAKRHLFDPAAFMPVIDALGDRGKKQDV 777


>gi|356542070|ref|XP_003539494.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
           chloroplastic-like [Glycine max]
          Length = 729

 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 141/543 (25%), Positives = 238/543 (43%), Gaps = 67/543 (12%)

Query: 11  TKFIKTISAIMLKGHWAKLLNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESA 70
           +K  KTI+ ++     +K  +  + SSL  T     +L        PS +  FFKW +  
Sbjct: 49  SKTAKTIANLI----NSKPFSNGLLSSLLITISKTTVLRTLRLIKDPSKALRFFKWTQQK 104

Query: 71  VPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNS 130
              + H+ +S++ M+ IL + ++   A+N L  I               VK+ D      
Sbjct: 105 --GFSHTPESYFIMLEILGRERNLNVARNFLFSIEKHS--------KGTVKLED------ 148

Query: 131 HVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKK 190
              + L+  YA   + ++ +++F  M+   + P +     L++ L K   T+M  +VY +
Sbjct: 149 RFFNSLIRSYAEAGLFKESMKLFQTMKSIAVSPSVVTFNSLMSILLKRGRTNMAKEVYDE 208

Query: 191 MVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGM 250
           M  LG                                   V  D  TYN LI  +CK  M
Sbjct: 209 M--LGTYG--------------------------------VSPDTCTYNVLIRGFCKNSM 234

Query: 251 HYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF----RDIKGATPNHVTY 306
             E       ME      D+VTYN+L+ G CR G++R AR L     +  +G  PN VTY
Sbjct: 235 VDEGFRFFREMESFNCDADVVTYNTLVDGLCRAGKVRIARNLVNGMGKKCEGLNPNVVTY 294

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM-N 365
           TTLI GYC   ++EEAL + E M ++G+ P ++TYN++++ LC+  ++     +L  M +
Sbjct: 295 TTLIRGYCMKQEVEEALVVLEEMTSRGLKPNMITYNTLVKGLCEAHKLDKMKDVLERMKS 354

Query: 366 EKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMD 425
           +   +PD  T NT+I+ +C  G+   A+KV   M +  +  D  +Y  LI   C+  + D
Sbjct: 355 DGGFSPDTFTFNTIIHLHCCAGNLDEALKVFESMKKFRIPADSASYSTLIRSLCQKGDYD 414

Query: 426 IAKELLFGMLDA-------GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDV 478
           +A++L   + +        G  P   SY+ + +  C     +   +++ + + RG   D 
Sbjct: 415 MAEQLFDELFEKEILLSKFGSKPLAASYNPIFESLCEHGKTKKAERVIRQLMKRG-TQDP 473

Query: 479 SVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDD 538
             Y  +I   CK+   +    L   M     L D  IY  L   + +  +P    + L+ 
Sbjct: 474 QSYTTVIMGHCKEGAYESGYELLMWMLRRDFLPDIEIYDYLIDGFLQKDKPLLAKETLEK 533

Query: 539 MYR 541
           M +
Sbjct: 534 MLK 536



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/292 (27%), Positives = 138/292 (47%), Gaps = 9/292 (3%)

Query: 262 EREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGATPNHVT-----YTTLIDGYCRA 316
           +++G S    +Y  ++    RE  +  AR     I+  +   V      + +LI  Y  A
Sbjct: 102 QQKGFSHTPESYFIMLEILGRERNLNVARNFLFSIEKHSKGTVKLEDRFFNSLIRSYAEA 161

Query: 317 NDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM-NEKKIAPDNVT 375
              +E+++L + M +  V P VVT+NS++  L K GR   A  + +EM     ++PD  T
Sbjct: 162 GLFKESMKLFQTMKSIAVSPSVVTFNSLMSILLKRGRTNMAKEVYDEMLGTYGVSPDTCT 221

Query: 376 CNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGML 435
            N LI  +CK        +    M       D  TY  L+ G C+A ++ IA+ L+ GM 
Sbjct: 222 YNVLIRGFCKNSMVDEGFRFFREMESFNCDADVVTYNTLVDGLCRAGKVRIARNLVNGMG 281

Query: 436 D--AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEK 493
               G +P+  +Y+ L+ GYC K   E  L +L+E  SRGL  ++  Y  L++  C+  K
Sbjct: 282 KKCEGLNPNVVTYTTLIRGYCMKQEVEEALVVLEEMTSRGLKPNMITYNTLVKGLCEAHK 341

Query: 494 VDYAQRLFNLMQGNGILG-DSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL 544
           +D  + +   M+ +G    D+  + ++ + +  AG       + + M + R+
Sbjct: 342 LDKMKDVLERMKSDGGFSPDTFTFNTIIHLHCCAGNLDEALKVFESMKKFRI 393



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/276 (22%), Positives = 126/276 (45%), Gaps = 9/276 (3%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           +++N + K  +  + N    + L+  Y   +  ++ L V ++M    L P++     L+ 
Sbjct: 275 NLVNGMGKKCEGLNPNVVTYTTLIRGYCMKQEVEEALVVLEEMTSRGLKPNMITYNTLVK 334

Query: 174 SLAKDRLTDMVWKVYKKM-VQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVR 232
            L +    D +  V ++M    G   +   +N +IH  C + ++D+  K+   M+   + 
Sbjct: 335 GLCEAHKLDKMKDVLERMKSDGGFSPDTFTFNTIIHLHCCAGNLDEALKVFESMKKFRIP 394

Query: 233 ADLFTYNTLIALYCKKGMHYEALAVQDRM-ERE------GISPDIVTYNSLIHGFCREGR 285
           AD  +Y+TLI   C+KG +  A  + D + E+E      G  P   +YN +    C  G+
Sbjct: 395 ADSASYSTLIRSLCQKGDYDMAEQLFDELFEKEILLSKFGSKPLAASYNPIFESLCEHGK 454

Query: 286 MREARRLFRDI-KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSI 344
            ++A R+ R + K  T +  +YTT+I G+C+    E    L   M  +   P +  Y+ +
Sbjct: 455 TKKAERVIRQLMKRGTQDPQSYTTVIMGHCKEGAYESGYELLMWMLRRDFLPDIEIYDYL 514

Query: 345 LRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLI 380
           +    ++ +   A   L +M +    P   T ++++
Sbjct: 515 IDGFLQKDKPLLAKETLEKMLKSSYQPKTSTWHSVL 550


>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
 gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
          Length = 721

 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 109/354 (30%), Positives = 182/354 (51%), Gaps = 19/354 (5%)

Query: 185 WKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIAL 244
           + V ++M+  G + +   Y+ +I   C +S V+K  +L  EM+   +  D++ Y TLI  
Sbjct: 207 YNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDS 266

Query: 245 YCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPN 302
           +CK G   +A    D MER+G +P++VTY +LIH + +  ++ +A  ++  +  KG TPN
Sbjct: 267 FCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPN 326

Query: 303 HVTYTTLIDGYCRANDLEEALRLREVMAAKGVY-----------------PGVVTYNSIL 345
            VTYT LIDG C+A  +E+A ++ ++M  + V                  P V TY +++
Sbjct: 327 IVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALV 386

Query: 346 RKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLM 405
             LCK  ++++A  LL  M+ +   P++V  + LI+  CK G    A +V   MLE G  
Sbjct: 387 DGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYD 446

Query: 406 LDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKL 465
            + +TY +LI    K K +D+A ++L  ML+   +P+   Y+ ++DG C     +   KL
Sbjct: 447 PNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKL 506

Query: 466 LDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
           +     +G   +V  Y A+I  F K  +V+    L   M   G   + V Y  L
Sbjct: 507 MVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVL 560



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 113/396 (28%), Positives = 187/396 (47%), Gaps = 20/396 (5%)

Query: 176 AKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADL 235
            KD L D+  K Y +M++ GVV N    +      C     +K   ++ EM  K    D 
Sbjct: 164 GKDVL-DLAEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDT 222

Query: 236 FTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD 295
            TY+ +I   C      +A  +   M+R GI+PD+  Y +LI  FC+ G + +AR  F +
Sbjct: 223 STYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDE 282

Query: 296 IK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGR 353
           ++  G  PN VTYT LI  Y ++  + +A  + E+M +KG  P +VTY +++  LCK G+
Sbjct: 283 MERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGK 342

Query: 354 IRDANRLLNEMNEKKIA-----------------PDNVTCNTLINAYCKIGDTASAMKVK 396
           I  A+++   M ++ +                  P+  T   L++  CK      A  + 
Sbjct: 343 IEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLL 402

Query: 397 NRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNK 456
             M   G   +   Y ALI G CKA ++D A+E+   ML+ G+ P+  +YS L+D     
Sbjct: 403 KSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKD 462

Query: 457 NNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIY 516
              +  LK+L + +      +V +Y  +I   CK  K D A +L  +M+  G   + V Y
Sbjct: 463 KRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTY 522

Query: 517 TSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYR 552
           T++   + ++G  + C ++L  M  +        YR
Sbjct: 523 TAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYR 558



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 113/382 (29%), Positives = 188/382 (49%), Gaps = 21/382 (5%)

Query: 126 PDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVW 185
           PD +++  S ++ +  N    +   Q+F +M+ + + P ++  T L++S  K    +   
Sbjct: 220 PDTSTY--SKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQAR 277

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
             + +M + G   N+  Y  LIHA  KS  V K  ++   M  K    ++ TY  LI   
Sbjct: 278 NWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGL 337

Query: 246 CKKGMHYEALAVQDRMEREGI-----------------SPDIVTYNSLIHGFCREGRMRE 288
           CK G   +A  +   M++E +                  P++ TY +L+ G C+  +++E
Sbjct: 338 CKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKE 397

Query: 289 ARRLFR--DIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILR 346
           AR L +   ++G  PNHV Y  LIDG C+A  L+EA  +   M   G  P V TY+S++ 
Sbjct: 398 ARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLID 457

Query: 347 KLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLML 406
           +L K+ R+  A ++L++M E   AP+ V    +I+  CK+G T  A K+   M E G   
Sbjct: 458 RLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNP 517

Query: 407 DQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLL 466
           +  TY A+I GF K+  ++   ELL  M   G +P++ +Y  L++  C+    +   KLL
Sbjct: 518 NVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLL 577

Query: 467 DEFVSRGLCVDVSVYRALIRRF 488
           +E         V+ YR +I  F
Sbjct: 578 EEMKQTYWPRHVAGYRKVIEGF 599



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 102/378 (26%), Positives = 184/378 (48%), Gaps = 19/378 (5%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           +    V  +M     +P     + ++  L      +  ++++++M + G+  ++++Y  L
Sbjct: 204 EKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTL 263

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           I + CK+  +++      EME      ++ TY  LI  Y K     +A  V + M  +G 
Sbjct: 264 IDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGC 323

Query: 267 SPDIVTYNSLIHGFCREGRMREARRL-----------------FRDIKGAT--PNHVTYT 307
           +P+IVTY +LI G C+ G++ +A ++                 FR + GA+  PN  TY 
Sbjct: 324 TPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYG 383

Query: 308 TLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEK 367
            L+DG C+A  ++EA  L + M+ +G  P  V Y++++   CK G++ +A  +   M E 
Sbjct: 384 ALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLEC 443

Query: 368 KIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIA 427
              P+  T ++LI+   K      A+KV ++MLE     +   Y  +I G CK  + D A
Sbjct: 444 GYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEA 503

Query: 428 KELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRR 487
            +L+  M + G +P+  +Y+ ++DG+      E  L+LL +  S+G   +   YR LI  
Sbjct: 504 YKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINH 563

Query: 488 FCKKEKVDYAQRLFNLMQ 505
            C    +D A +L   M+
Sbjct: 564 CCSTGLLDEAHKLLEEMK 581



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 110/396 (27%), Positives = 180/396 (45%), Gaps = 27/396 (6%)

Query: 126 PDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVW 185
           PD   +V + L+  +      +     FD+M      P++   T L+++  K R      
Sbjct: 255 PD--VYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKAN 312

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLL------------CEMEFKDV-- 231
           +VY+ M+  G   NI  Y  LI   CK+  ++K  ++              +M F+ V  
Sbjct: 313 EVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDG 372

Query: 232 ---RADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
                ++FTY  L+   CK     EA  +   M  EG  P+ V Y++LI G C+ G++ E
Sbjct: 373 ASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDE 432

Query: 289 ARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILR 346
           A+ +F  +   G  PN  TY++LID   +   L+ AL++   M      P VV Y  ++ 
Sbjct: 433 AQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMID 492

Query: 347 KLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLML 406
            LCK G+  +A +L+  M EK   P+ VT   +I+ + K G     +++  +M   G   
Sbjct: 493 GLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAP 552

Query: 407 DQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLL 466
           +  TY+ LI+  C    +D A +LL  M    +      Y  +++G+    N E +  L 
Sbjct: 553 NFVTYRVLINHCCSTGLLDEAHKLLEEMKQTYWPRHVAGYRKVIEGF----NREFIASLY 608

Query: 467 DEF-VSRGLCVDVS-VYRALIRRFCKKEKVDYAQRL 500
             F +S    V V+ VYR LI  F K  +++ A  L
Sbjct: 609 LSFEISENDSVPVAPVYRVLIDNFIKAGRLEIALEL 644



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 92/340 (27%), Positives = 149/340 (43%), Gaps = 10/340 (2%)

Query: 232 RADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARR 291
           R D FT        CK G   EAL++   +E+E   PD V Y  +I G C      EA  
Sbjct: 7   RMDEFTLGCFAHSLCKSGKWREALSL---LEKEEFVPDTVLYTKMISGLCEASLFEEAMD 63

Query: 292 LFRDIKGAT--PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLC 349
               ++ ++  PN +TY  L+ G      L    R+  +M  +G YP    +NS++   C
Sbjct: 64  FLTRMRASSCLPNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNSLVHAYC 123

Query: 350 KEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTAS-----AMKVKNRMLEAGL 404
           + G    A +LL +M +    P  V  N LI   C   +        A K    MLEAG+
Sbjct: 124 RSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGEMLEAGV 183

Query: 405 MLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLK 464
           +L++          C   + + A  ++  M+  GF P   +YS ++   CN +  E   +
Sbjct: 184 VLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQ 243

Query: 465 LLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYW 524
           L  E    G+  DV VY  LI  FCK   ++ A+  F+ M+ +G   + V YT+L +AY 
Sbjct: 244 LFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYL 303

Query: 525 RAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
           ++ +    +++ + M  +     +  Y +      K  +I
Sbjct: 304 KSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKI 343



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 92/321 (28%), Positives = 147/321 (45%), Gaps = 12/321 (3%)

Query: 261 MEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLE 320
           M   G   D  T     H  C+ G+ REA  L    +   P+ V YT +I G C A+  E
Sbjct: 1   MSTMGYRMDEFTLGCFAHSLCKSGKWREALSLLEK-EEFVPDTVLYTKMISGLCEASLFE 59

Query: 321 EALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLI 380
           EA+     M A    P V+TY  +L     + ++    R+L+ M  +   P     N+L+
Sbjct: 60  EAMDFLTRMRASSCLPNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNSLV 119

Query: 381 NAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE-----MDIAKELLFGML 435
           +AYC+ GD A A K+  +M++ G       Y  LI G C ++E     +D+A++    ML
Sbjct: 120 HAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGEML 179

Query: 436 DAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVD 495
           +AG   +  + S      C     E    ++ E +S+G   D S Y  +I   C   KV+
Sbjct: 180 EAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVE 239

Query: 496 YAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFS 555
            A +LF  M+ NGI  D  +YT+L  ++ +AG  +   +  D+M R      +  Y +  
Sbjct: 240 KAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALI 299

Query: 556 ASY------AKDNEILDLFWS 570
            +Y      +K NE+ ++  S
Sbjct: 300 HAYLKSRKVSKANEVYEMMLS 320



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 102/385 (26%), Positives = 163/385 (42%), Gaps = 12/385 (3%)

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           H+ CKS    +   LL + EF     D   Y  +I+  C+  +  EA+    RM      
Sbjct: 18  HSLCKSGKWREALSLLEKEEF---VPDTVLYTKMISGLCEASLFEEAMDFLTRMRASSCL 74

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
           P+++TY  L+ G   + ++   +R+   +  +G  P+   + +L+  YCR+ D   A +L
Sbjct: 75  PNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNSLVHAYCRSGDYAYAYKL 134

Query: 326 REVMAAKGVYPGVVTYNSILRKLC-KEGRIRD----ANRLLNEMNEKKIAPDNVTCNTLI 380
            + M   G  PG V YN ++  +C  E   +D    A +   EM E  +  + V  +   
Sbjct: 135 LKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFS 194

Query: 381 NAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFS 440
              C IG    A  V   M+  G + D  TY  +I   C A +++ A +L   M   G +
Sbjct: 195 RCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIA 254

Query: 441 PSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRL 500
           P    Y+ L+D +C     E      DE    G   +V  Y ALI  + K  KV  A  +
Sbjct: 255 PDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEV 314

Query: 501 FNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAK 560
           + +M   G   + V YT+L     +AG+ +  S I   M +  + I   +   F      
Sbjct: 315 YEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIP-DVDMHFRVVDGA 373

Query: 561 DNEILDLFWSHVVDRGLMSKHIFKE 585
            NE     +  +VD GL   +  KE
Sbjct: 374 SNEPNVFTYGALVD-GLCKAYQVKE 397



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 96/405 (23%), Positives = 168/405 (41%), Gaps = 24/405 (5%)

Query: 159 HNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDK 218
              +P     T +++ L +  L +       +M     + N+  Y +L+  C     + +
Sbjct: 36  EEFVPDTVLYTKMISGLCEASLFEEAMDFLTRMRASSCLPNVLTYRILLCGCLNKEKLGR 95

Query: 219 VEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIH 278
            +++L  M  +        +N+L+  YC+ G +  A  +  +M + G  P  V YN LI 
Sbjct: 96  CKRILSMMITEGCYPSPRIFNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIG 155

Query: 279 GFC---REGR--MREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAA 331
           G C     G+  +  A + + ++   G   N V  +      C     E+A  +   M +
Sbjct: 156 GICSSEEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMS 215

Query: 332 KGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTAS 391
           KG  P   TY+ ++  LC   ++  A +L  EM    IAPD     TLI+++CK G    
Sbjct: 216 KGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQ 275

Query: 392 AMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVD 451
           A    + M   G   +  TY ALIH + K++++  A E+   ML  G +P+  +Y+ L+D
Sbjct: 276 ARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALID 335

Query: 452 GYCNKNNEEALLKLLDEFVSRGLCV-----------------DVSVYRALIRRFCKKEKV 494
           G C     E   ++        + +                 +V  Y AL+   CK  +V
Sbjct: 336 GLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQV 395

Query: 495 DYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
             A+ L   M   G   + V+Y +L     +AG+     ++   M
Sbjct: 396 KEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTM 440



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 81/319 (25%), Positives = 132/319 (41%), Gaps = 37/319 (11%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           +VF  M      P+++  + L++ L KD+  D+  KV  KM++     N+ +Y  +I   
Sbjct: 435 EVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGL 494

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           CK    D+  KL+  ME K    ++ TY  +I  + K G   + L +  +M  +G +P+ 
Sbjct: 495 CKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNF 554

Query: 271 VTYNSLIHGFCREGRMREARRLFRDIKGAT-PNHVT-YTTLIDGYCRANDLEEALRLREV 328
           VTY  LI+  C  G + EA +L  ++K    P HV  Y  +I+G+ R  +   +L L   
Sbjct: 555 VTYRVLINHCCSTGLLDEAHKLLEEMKQTYWPRHVAGYRKVIEGFNR--EFIASLYLSFE 612

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           ++     P    Y  ++    K GR+  A  L  E++    +P +               
Sbjct: 613 ISENDSVPVAPVYRVLIDNFIKAGRLEIALELNEELS--SFSPFSAA------------- 657

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
                             +Q  +  LI     A + D A EL   M+  G  P       
Sbjct: 658 ------------------NQNIHITLIENLSLAHKADKAFELYADMISRGSIPELSILVH 699

Query: 449 LVDGYCNKNNEEALLKLLD 467
           L+ G    N  E  L+LLD
Sbjct: 700 LIKGLLRVNRWEEALQLLD 718


>gi|326522214|dbj|BAK04235.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 966

 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 117/397 (29%), Positives = 195/397 (49%), Gaps = 18/397 (4%)

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
           +  +++ K+M++ G V +   Y  +I   C++  VDK   L  EM+   V  D++TY  L
Sbjct: 434 EKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTIL 493

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGAT- 300
           I  +CK G+  +A +  D M   G SP++VTY +L+H + +  ++ +A  +F  + G   
Sbjct: 494 IDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDAC 553

Query: 301 -PNHVTYTTLIDGYCRANDLEEALRLREVMAAKG----------------VYPGVVTYNS 343
            PN +TY+ LIDG C+A ++++A  +   +                    + P VVTY +
Sbjct: 554 YPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGA 613

Query: 344 ILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAG 403
           ++  LCK  ++ DA+ LL+ M      P+ +  + L++ +CK+G+  SA +V  RM + G
Sbjct: 614 LVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCG 673

Query: 404 LMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALL 463
            +    TY +LI    K   +D+A ++L  ML    +P+  +Y+ +VDG C     E  L
Sbjct: 674 YLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKAL 733

Query: 464 KLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAY 523
            LL     +G   +V  Y ALI    K  KVD    LF  M+  G   + V Y  L    
Sbjct: 734 NLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRILINHC 793

Query: 524 WRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAK 560
             AG       +LD+M +      L+ YR+    ++K
Sbjct: 794 CAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGFSK 830



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 108/411 (26%), Positives = 191/411 (46%), Gaps = 27/411 (6%)

Query: 104 IALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMT-------QDGLQVFDQM 156
           I  R+ L  P +L+   K++++    S VL+   I  AN           +   Q+  +M
Sbjct: 386 ICGREELPNPELLDLAEKVYEEMLVASCVLN--KINTANFARCLCGVGKFEKAFQIVKEM 443

Query: 157 RVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDV 216
                +P     T ++  L + +  D  + ++++M ++GV  +++ Y +LI + CK+  +
Sbjct: 444 MRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLI 503

Query: 217 DKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSL 276
           ++ +    EM       ++ TY  L+  Y K    Y+A  +  RM  +   P+ +TY++L
Sbjct: 504 EQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSAL 563

Query: 277 IHGFCREGRMREARRLF------------------RDIKGATPNHVTYTTLIDGYCRAND 318
           I G C+ G +++A  ++                  +D    +PN VTY  L++G C+A  
Sbjct: 564 IDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQK 623

Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT 378
           + +A  L + M A G  P  + Y++++   CK G I  A  +   M +    P   T  +
Sbjct: 624 VSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTS 683

Query: 379 LINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAG 438
           LI+   K G    AMKV ++ML+     +  TY A++ G CK  E + A  LL  M   G
Sbjct: 684 LIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKKG 743

Query: 439 FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFC 489
            SP+  +Y+ L+DG       +A L+L  +  ++G   +   YR LI   C
Sbjct: 744 CSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRILINHCC 794



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 114/483 (23%), Positives = 198/483 (40%), Gaps = 62/483 (12%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           + +    +MR ++ +P++     LL    K +      ++   M+  G   +  L+N L+
Sbjct: 289 EAMSFLHRMRCNSYIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMTEGCNPSPSLFNSLV 348

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK------------------- 248
           H  C + D     KL   M           YN  I   C +                   
Sbjct: 349 HTYCNAEDYAYAYKLFNRMNTCGCPPGYVVYNIFIGSICGREELPNPELLDLAEKVYEEM 408

Query: 249 ----------------------GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRM 286
                                 G   +A  +   M R+G  PD  TY  +I   C+  R+
Sbjct: 409 LVASCVLNKINTANFARCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRV 468

Query: 287 REARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSI 344
            +A  LF+++K  G  P+  TYT LID +C+A  +E+A    + M + G  P VVTY ++
Sbjct: 469 DKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTAL 528

Query: 345 LRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGL 404
           L    K  ++  AN + + M      P+ +T + LI+  CK G+   A +V  +++    
Sbjct: 529 LHAYLKSKQLYQANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSD 588

Query: 405 MLDQ----------------FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
            ++                  TY AL++G CKA+++  A +LL  ML AG  P+   Y  
Sbjct: 589 NIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDA 648

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG 508
           LVDG+C     ++  ++       G    V  Y +LI R  K  ++D A ++ + M  + 
Sbjct: 649 LVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDS 708

Query: 509 ILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI---L 565
              + V YT++     + GE +   ++L  M ++     +  Y +      K  ++   L
Sbjct: 709 CNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGL 768

Query: 566 DLF 568
           +LF
Sbjct: 769 ELF 771



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 116/485 (23%), Positives = 200/485 (41%), Gaps = 30/485 (6%)

Query: 57  PSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVL 116
           P L   FF WAE  V  YKH+   +  +  +L      ++A+ +L +I            
Sbjct: 114 PELCVRFFLWAERQV-GYKHTGACYDALAEVLGFEDPARTAERLLREIG----------- 161

Query: 117 NALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLA 176
                  DD D    +L+ LV       +  + L+   +++     P       L+  LA
Sbjct: 162 ------EDDRDVLGRLLNVLVRRCCLQGLWGEALEELGRLKDFGYRPSAVTYNALVQVLA 215

Query: 177 KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLF 236
                +M ++V K+M   G   +         A CK         LL   E +D + D  
Sbjct: 216 SAGQVEMAFRVQKEMSASGFCMDRSTVGSFAQALCKEGRWGDALDLL---EREDFKLDTV 272

Query: 237 TYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI 296
               +I+   +  +  EA++   RM      P++VTY +L+ GF ++ ++   +R+   +
Sbjct: 273 LCTQMISGLMEASLFNEAMSFLHRMRCNSYIPNVVTYRTLLTGFLKKKQLGWCKRIINMM 332

Query: 297 --KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRI 354
             +G  P+   + +L+  YC A D   A +L   M   G  PG V YN  +  +C    +
Sbjct: 333 MTEGCNPSPSLFNSLVHTYCNAEDYAYAYKLFNRMNTCGCPPGYVVYNIFIGSICGREEL 392

Query: 355 RD------ANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ 408
            +      A ++  EM       + +         C +G    A ++   M+  G + D 
Sbjct: 393 PNPELLDLAEKVYEEMLVASCVLNKINTANFARCLCGVGKFEKAFQIVKEMMRKGFVPDA 452

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
            TY  +I   C+AK +D A  L   M   G +P   +Y+ L+D +C     E      DE
Sbjct: 453 STYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDE 512

Query: 469 FVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
             S G   +V  Y AL+  + K +++  A  +F+ M G+    +++ Y++L     +AGE
Sbjct: 513 MRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSALIDGLCKAGE 572

Query: 529 -PKAC 532
             KAC
Sbjct: 573 IQKAC 577



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 106/428 (24%), Positives = 176/428 (41%), Gaps = 56/428 (13%)

Query: 129 NSHVLSWLVIFYANLKMTQ--DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWK 186
           + +V+++  + +A LK  Q      +F +M      P+    + L++ L K        +
Sbjct: 519 SPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQKACE 578

Query: 187 VYKKMVQLG----------------VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKD 230
           VY K++                   +  N+  Y  L++  CK+  V     LL  M    
Sbjct: 579 VYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAG 638

Query: 231 VRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREAR 290
              +   Y+ L+  +CK G    A  V  RM + G  P + TY SLI    ++GR+  A 
Sbjct: 639 CEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAM 698

Query: 291 RLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
           ++   +      PN VTYT ++DG C+  + E+AL L  +M  KG  P VVTY +++  L
Sbjct: 699 KVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGL 758

Query: 349 CKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT------------------- 389
            K G++     L  +M  K  AP+ VT   LIN  C  G                     
Sbjct: 759 GKAGKVDAGLELFMQMKTKGCAPNYVTYRILINHCCAAGLLDDAHLLLDEMKQTHWPKYL 818

Query: 390 ----ASAMKVKNRMLEAGLMLDQF----------TYKALIHGFCKAKEMDIAKELLFGML 435
                +      R L +  +L++            Y  LI  F KA  ++ A EL   M+
Sbjct: 819 QGYRTTVQGFSKRFLASLGLLEEMESHDTAPIAPVYGMLIDSFSKAGRLETALELHKEMM 878

Query: 436 DAGFSPSYCS---YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKE 492
           +   S +  S   ++ L+   C  +  E  + L  E   RG+  D+S +  L++   ++ 
Sbjct: 879 EVSSSLNMASKDMHTSLIQALCLSSQVEEAVALYSEMRRRGIVPDLSAFVCLVKGLIERN 938

Query: 493 KVDYAQRL 500
           K + A +L
Sbjct: 939 KWNEALQL 946



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 115/458 (25%), Positives = 203/458 (44%), Gaps = 25/458 (5%)

Query: 115 VLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNS 174
           +   + K+  +PD  ++ +  L+  +    + +     FD+MR     P++   T LL++
Sbjct: 474 LFQEMKKVGVNPDVYTYTI--LIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHA 531

Query: 175 LAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEM-------- 226
             K +       ++ +MV      N   Y+ LI   CK+ ++ K  ++  ++        
Sbjct: 532 YLKSKQLYQANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIE 591

Query: 227 -----EFKD---VRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIH 278
                E KD   +  ++ TY  L+   CK     +A  + D M   G  P+ + Y++L+ 
Sbjct: 592 SDFYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVD 651

Query: 279 GFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYP 336
           GFC+ G +  A+ +F  +   G  P+  TYT+LID   +   L+ A+++   M      P
Sbjct: 652 GFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNP 711

Query: 337 GVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVK 396
            VVTY +++  LCK G    A  LL+ M +K  +P+ VT   LI+   K G   + +++ 
Sbjct: 712 NVVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELF 771

Query: 397 NRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNK 456
            +M   G   +  TY+ LI+  C A  +D A  LL  M    +      Y   V G+  +
Sbjct: 772 MQMKTKGCAPNYVTYRILINHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGFSKR 831

Query: 457 NNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF-NLMQGNGIL--GDS 513
               A L LL+E  S        VY  LI  F K  +++ A  L   +M+ +  L     
Sbjct: 832 F--LASLGLLEEMESHDTAPIAPVYGMLIDSFSKAGRLETALELHKEMMEVSSSLNMASK 889

Query: 514 VIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIY 551
            ++TSL  A   + + +    +  +M RR ++  L  +
Sbjct: 890 DMHTSLIQALCLSSQVEEAVALYSEMRRRGIVPDLSAF 927



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 101/385 (26%), Positives = 156/385 (40%), Gaps = 14/385 (3%)

Query: 201 HLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDR 260
            L NVL+  CC      +  + L  ++    R    TYN L+ +    G    A  VQ  
Sbjct: 170 RLLNVLVRRCCLQGLWGEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMAFRVQKE 229

Query: 261 MEREGISPDIVTYNSLIHGFCREGRMREARRLFR--DIKGATPNHVTYTTLIDGYCRAND 318
           M   G   D  T  S     C+EGR  +A  L    D K  T   V  T +I G   A+ 
Sbjct: 230 MSASGFCMDRSTVGSFAQALCKEGRWGDALDLLEREDFKLDT---VLCTQMISGLMEASL 286

Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT 378
             EA+     M      P VVTY ++L    K+ ++    R++N M  +   P     N+
Sbjct: 287 FNEAMSFLHRMRCNSYIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMTEGCNPSPSLFNS 346

Query: 379 LINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE------MDIAKELLF 432
           L++ YC   D A A K+ NRM   G       Y   I   C  +E      +D+A+++  
Sbjct: 347 LVHTYCNAEDYAYAYKLFNRMNTCGCPPGYVVYNIFIGSICGREELPNPELLDLAEKVYE 406

Query: 433 GMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKE 492
            ML A    +  + +      C     E   +++ E + +G   D S Y  +I   C+ +
Sbjct: 407 EMLVASCVLNKINTANFARCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAK 466

Query: 493 KVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYR 552
           +VD A  LF  M+  G+  D   YT L  ++ +AG  +      D+M        +  Y 
Sbjct: 467 RVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYT 526

Query: 553 SFSASYAKDNEIL---DLFWSHVVD 574
           +   +Y K  ++    D+F   V D
Sbjct: 527 ALLHAYLKSKQLYQANDIFHRMVGD 551



 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 52/227 (22%), Positives = 84/227 (37%), Gaps = 38/227 (16%)

Query: 146 TQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNV 205
           T+  L +   M      P++   T L++ L K    D   +++ +M   G   N   Y +
Sbjct: 729 TEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRI 788

Query: 206 LIHACCKS--------------------------SDVDKVEK-------LLCEMEFKDVR 232
           LI+ CC +                          + V    K       LL EME  D  
Sbjct: 789 LINHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGFSKRFLASLGLLEEMESHDTA 848

Query: 233 ADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVT---YNSLIHGFCREGRMREA 289
                Y  LI  + K G    AL +   M     S ++ +   + SLI   C   ++ EA
Sbjct: 849 PIAPVYGMLIDSFSKAGRLETALELHKEMMEVSSSLNMASKDMHTSLIQALCLSSQVEEA 908

Query: 290 RRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGV 334
             L+ +++  G  P+   +  L+ G    N   EAL+L   +  +GV
Sbjct: 909 VALYSEMRRRGIVPDLSAFVCLVKGLIERNKWNEALQLCYGICQEGV 955



 Score = 40.0 bits (92), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 28/121 (23%), Positives = 60/121 (49%), Gaps = 3/121 (2%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANI---HLYNVL 206
           L + ++M  H+  P      +L++S +K    +   +++K+M+++    N+    ++  L
Sbjct: 836 LGLLEEMESHDTAPIAPVYGMLIDSFSKAGRLETALELHKEMMEVSSSLNMASKDMHTSL 895

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           I A C SS V++   L  EM  + +  DL  +  L+    ++    EAL +   + +EG+
Sbjct: 896 IQALCLSSQVEEAVALYSEMRRRGIVPDLSAFVCLVKGLIERNKWNEALQLCYGICQEGV 955

Query: 267 S 267
           +
Sbjct: 956 N 956


>gi|413924892|gb|AFW64824.1| hypothetical protein ZEAMMB73_716034 [Zea mays]
          Length = 721

 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 123/428 (28%), Positives = 192/428 (44%), Gaps = 38/428 (8%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N    + ++ F A     ++ +++ D MR+            L+ +L +         + 
Sbjct: 273 NDVTFNVVISFLAREGHLENAVKLVDSMRLSKKASSF-TYNPLITALLERGFVRKAEALQ 331

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
            +M   G++  +  YN +IH   K    +  +    EM    +  D+ TYN+L+  YCK 
Sbjct: 332 MEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLPDVITYNSLLNRYCKA 391

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTY 306
           G   EAL +   + R G++P ++TYN+LI G+CR G + EARRL  ++  +G  P+  TY
Sbjct: 392 GNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTY 451

Query: 307 TTLIDGYCRANDL-----------------------------------EEALRLREVMAA 331
           T L++G  +  +L                                     A +LREVM  
Sbjct: 452 TILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRICAELTLSSTPMAFQLREVMML 511

Query: 332 KGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTAS 391
           KG+YP  VTYN I+  LCK G ++DA RL  +M    + PD +T   LI+A+C+ G    
Sbjct: 512 KGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLIHAHCERGLLRE 571

Query: 392 AMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVD 451
           A K+ N M+  GL     TY  L+H  C+   +  A      MLD G  P+  +Y+ L+ 
Sbjct: 572 ARKLLNGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIH 631

Query: 452 GYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILG 511
             C         +   E + RGL  +   Y  LI   C++     A RL+  M  NGI  
Sbjct: 632 ALCMTGRTPLAFRHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPP 691

Query: 512 DSVIYTSL 519
           D   + +L
Sbjct: 692 DYCTHNAL 699



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 137/468 (29%), Positives = 192/468 (41%), Gaps = 73/468 (15%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           L  F  +  H + P +  C  +L  L      D V  VY +M+QL V   I  YN L+ +
Sbjct: 187 LAAFRLVTCHGVAPDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLDS 246

Query: 210 CCKSSDVDKVEKLLCEME-------FKDV-----------------------------RA 233
             K    D+   LL EME         DV                             +A
Sbjct: 247 FLKEGRKDEASMLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSMRLSKKA 306

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHG-------------- 279
             FTYN LI    ++G   +A A+Q  ME EGI P +VTYN++IHG              
Sbjct: 307 SSFTYNPLITALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKF 366

Query: 280 ---------------------FCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRA 316
                                +C+ G ++EA  L  D++  G  P  +TY TLIDGYCR 
Sbjct: 367 AEMRAMGLLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRL 426

Query: 317 NDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTC 376
            DL EA RL+E M  +G +P V TY  ++    K   +  A    +EM  K + PD    
Sbjct: 427 GDLAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAY 486

Query: 377 NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD 436
           NT I A   +  T  A +++  M+  G+  D  TY  +I G CK   +  AK L   M+ 
Sbjct: 487 NTRICAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVS 546

Query: 437 AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDY 496
            G  P   +Y+ L+  +C +       KLL+  VS GL   V  Y  L+   C++  +  
Sbjct: 547 DGLQPDCITYTCLIHAHCERGLLREARKLLNGMVSDGLQPSVVTYTILVHTCCRRGNLYS 606

Query: 497 AQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL 544
           A   F  M   GI  + + Y  L +A    G          +M  R L
Sbjct: 607 AYGWFRKMLDVGIEPNEITYNVLIHALCMTGRTPLAFRHFHEMLERGL 654



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 98/371 (26%), Positives = 173/371 (46%), Gaps = 37/371 (9%)

Query: 155 QMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSS 214
           +M    +MP +     +++ L K    +     + +M  +G++ ++  YN L++  CK+ 
Sbjct: 333 EMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLPDVITYNSLLNRYCKAG 392

Query: 215 DVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYN 274
           ++ +   LL ++    +   + TYNTLI  YC+ G   EA  +++ M  +G  PD+ TY 
Sbjct: 393 NLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTYT 452

Query: 275 SLIHGFCREGRMREARRLFRD-------------------------------------IK 297
            L++G  +   +  AR  F +                                     +K
Sbjct: 453 ILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRICAELTLSSTPMAFQLREVMMLK 512

Query: 298 GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDA 357
           G  P+ VTY  +IDG C+  +L++A RL+  M + G+ P  +TY  ++   C+ G +R+A
Sbjct: 513 GIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLIHAHCERGLLREA 572

Query: 358 NRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHG 417
            +LLN M    + P  VT   L++  C+ G+  SA     +ML+ G+  ++ TY  LIH 
Sbjct: 573 RKLLNGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHA 632

Query: 418 FCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVD 477
            C      +A      ML+ G +P+  +Y+ L+DG C + N    ++L  E    G+  D
Sbjct: 633 LCMTGRTPLAFRHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPD 692

Query: 478 VSVYRALIRRF 488
              + AL + F
Sbjct: 693 YCTHNALFKGF 703



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 72/275 (26%), Positives = 118/275 (42%), Gaps = 17/275 (6%)

Query: 294 RDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGR 353
           RD + ATP   +   L            A RL   +   GV P V   N +LR L    R
Sbjct: 172 RDTRHATPAACSTLCL-----------AAFRL---VTCHGVAPDVRDCNRVLRVLRDAAR 217

Query: 354 IRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG--DTASAMKVKNRMLEAGLMLDQFTY 411
             D   +  EM + ++ P  VT NTL++++ K G  D AS +  +      G  L+  T+
Sbjct: 218 WDDVRAVYGEMLQLRVEPTIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGFSLNDVTF 277

Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
             +I    +   ++ A +L+  M  +  + S+ +Y+ L+     +        L  E  +
Sbjct: 278 NVVISFLAREGHLENAVKLVDSMRLSKKASSF-TYNPLITALLERGFVRKAEALQMEMEN 336

Query: 472 RGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKA 531
            G+   V  Y A+I    K E+ + AQ  F  M+  G+L D + Y SL   Y +AG  K 
Sbjct: 337 EGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLPDVITYNSLLNRYCKAGNLKE 396

Query: 532 CSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
              +L D+ R  L  T+  Y +    Y +  ++ +
Sbjct: 397 ALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAE 431


>gi|356566887|ref|XP_003551657.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Glycine max]
          Length = 525

 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 138/473 (29%), Positives = 227/473 (47%), Gaps = 27/473 (5%)

Query: 42  AIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNML 101
           +++K+L ++    H P++            P  K SL +    I+ LT       A +++
Sbjct: 57  SLNKLLSSIMKTKHYPTVVSLCSHLDSKGTP--KPSLVTLSIFINSLTHLGQMGLAFSVM 114

Query: 102 EKIALRDFLSTPSVLNALVK-------------IHDDPDGNSHVLSWLVIFYANL----- 143
            KI  R F   P  L  L+K             ++D     S   S+  + Y  L     
Sbjct: 115 AKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNLYDH--AVSKGFSFDEVCYGTLINGLC 172

Query: 144 KM--TQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIH 201
           KM  T+D +++  +M    + P+L    ++++ L K+ L      +  +MV  G+  ++ 
Sbjct: 173 KMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKEGLVTEACGLCSEMVGKGICIDVF 232

Query: 202 LYNVLIHACCKSSDVDKVEKLLCEMEFK-DVRADLFTYNTLIALYCKKGMHYEALAVQDR 260
            YN LIH  C +       +LL EM  K DVR D++T+N L+   CK GM  EA  V   
Sbjct: 233 TYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVDALCKLGMVAEARNVFGL 292

Query: 261 MEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRAND 318
           M + G+ PD+V+ N+L++G+C  G M EA+ +F  +  +G  PN ++Y+TLI+GYC+   
Sbjct: 293 MIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLPNVISYSTLINGYCKVKM 352

Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT 378
           ++EALRL   M  + + P  VTYN +L  L K GR+     L+  M     APD +T N 
Sbjct: 353 VDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWDLVEAMRASGQAPDLITYNV 412

Query: 379 LINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAG 438
           L++ Y K      A+ +   +++ G+  +  TY  LI G CK   M  AKE+   +   G
Sbjct: 413 LLDDYLKRECLDKALALFQHIVDTGISPNIRTYNILIDGLCKGGRMKAAKEIFQLLSVKG 472

Query: 439 FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
             P+  +Y+ +++G   +   +    LL E V  G   +   +  L+R   +K
Sbjct: 473 CRPNIRTYNIMINGLRREGLLDEAEALLLEMVDDGFPPNAVTFDPLVRALLEK 525



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 107/296 (36%), Positives = 153/296 (51%), Gaps = 3/296 (1%)

Query: 233 ADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRL 292
            D FT  TL+   C KG  +EAL + D    +G S D V Y +LI+G C+ G+ R+A  L
Sbjct: 124 VDPFTLTTLMKGLCLKGRTFEALNLYDHAVSKGFSFDEVCYGTLINGLCKMGKTRDAIEL 183

Query: 293 FRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
            R ++  G  PN + Y  ++DG C+   + EA  L   M  KG+   V TYNS++   C 
Sbjct: 184 LRKMEKGGVRPNLIMYNMVVDGLCKEGLVTEACGLCSEMVGKGICIDVFTYNSLIHGFCG 243

Query: 351 EGRIRDANRLLNEMNEKK-IAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQF 409
            G+ + A RLLNEM  K+ + PD  T N L++A CK+G  A A  V   M++ GL  D  
Sbjct: 244 AGQFQGAVRLLNEMVMKEDVRPDVYTFNILVDALCKLGMVAEARNVFGLMIKRGLEPDVV 303

Query: 410 TYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEF 469
           +  AL++G+C    M  AKE+   M++ G  P+  SYS L++GYC     +  L+LL E 
Sbjct: 304 SCNALMNGWCLRGCMSEAKEVFDRMVERGKLPNVISYSTLINGYCKVKMVDEALRLLTEM 363

Query: 470 VSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWR 525
             R L  D   Y  L+    K  +V Y   L   M+ +G   D + Y  L   Y +
Sbjct: 364 HQRNLVPDTVTYNCLLDGLSKSGRVLYEWDLVEAMRASGQAPDLITYNVLLDDYLK 419



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 114/411 (27%), Positives = 184/411 (44%), Gaps = 8/411 (1%)

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDV-R 232
           +L K    D     + +M+ L    +I   N L+ +  K+     V  L   ++ K   +
Sbjct: 29  TLPKTPTFDDAVSTFHRMLHLHPPPSIVSLNKLLSSIMKTKHYPTVVSLCSHLDSKGTPK 88

Query: 233 ADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRL 292
             L T +  I      G    A +V  ++ + G   D  T  +L+ G C +GR  EA  L
Sbjct: 89  PSLVTLSIFINSLTHLGQMGLAFSVMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNL 148

Query: 293 FRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
           +     KG + + V Y TLI+G C+     +A+ L   M   GV P ++ YN ++  LCK
Sbjct: 149 YDHAVSKGFSFDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCK 208

Query: 351 EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRM-LEAGLMLDQF 409
           EG + +A  L +EM  K I  D  T N+LI+ +C  G    A+++ N M ++  +  D +
Sbjct: 209 EGLVTEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVY 268

Query: 410 TYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEF 469
           T+  L+   CK   +  A+ +   M+  G  P   S + L++G+C +       ++ D  
Sbjct: 269 TFNILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRM 328

Query: 470 VSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEP 529
           V RG   +V  Y  LI  +CK + VD A RL   M    ++ D+V Y  L     ++G  
Sbjct: 329 VERGKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRV 388

Query: 530 KACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD---LFWSHVVDRGL 577
               D+++ M        L  Y      Y K  E LD     + H+VD G+
Sbjct: 389 LYEWDLVEAMRASGQAPDLITYNVLLDDYLK-RECLDKALALFQHIVDTGI 438


>gi|302794007|ref|XP_002978768.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
 gi|300153577|gb|EFJ20215.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
          Length = 713

 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 112/449 (24%), Positives = 212/449 (47%), Gaps = 4/449 (0%)

Query: 108 DFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHA 167
           D ++  +   A+   H  P  N H+ + L+  YA  +  +  +   ++M    +  +   
Sbjct: 146 DKVAARATFEAMRASHIKP--NVHIYTSLIHAYAEARDMEGAVACTEEMLSQGIQLNEAV 203

Query: 168 CTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEME 227
              +++  A     +     ++K     +V    +YN ++ A C++ +++ VE LL +ME
Sbjct: 204 FCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNMETVEALLAQME 263

Query: 228 FKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMR 287
            +  + +L  Y T++  + +     + L+   R++  G+SP   TY  ++  F + G M 
Sbjct: 264 EEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMA 323

Query: 288 EARRLFR--DIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSIL 345
           +A  +    D  G +PN + Y  ++DGY R  D   A ++ E M + G+ P +VTYN ++
Sbjct: 324 KALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVTYNILV 383

Query: 346 RKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLM 405
              CK GR+  A  +L  +   ++ P   T  ++++ Y K G    A++V +R+  AGL 
Sbjct: 384 HAFCKAGRMDKALGVLENIQANRLLPTIETYTSILDGYVKGGHIQKALEVFDRIKTAGLR 443

Query: 406 LDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKL 465
               +Y +L+ G  KA++M+ A+ +L  ML  G  P+  SY+ L +GY    + E    +
Sbjct: 444 PGVVSYNSLLSGLAKARQMENARLMLDEMLANGVVPNERSYTALTEGYARAGDVEKAFGM 503

Query: 466 LDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWR 525
                   L +D+  Y AL++  CK   +  A  +F  +   G+  + + Y ++   + R
Sbjct: 504 FQRMKKENLAIDIVAYGALLKACCKSGAMQRAVEVFQQITDAGLKHNRITYCTMLDGWAR 563

Query: 526 AGEPKACSDILDDMYRRRLMITLKIYRSF 554
            GE     D+L DM +    +    Y SF
Sbjct: 564 KGELSKARDLLKDMQKHGFHLDTICYTSF 592



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 110/437 (25%), Positives = 201/437 (45%), Gaps = 19/437 (4%)

Query: 95  KSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFD 154
           ++A++  EK    + +    V N++V+ +    GN   +  L+      +M ++G Q   
Sbjct: 218 EAAEHWFEKFKAENLVPGGIVYNSIVQAYCQA-GNMETVEALLA-----QMEEEGFQ--- 268

Query: 155 QMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSS 214
                    +L   T +LN  A+ R  +     + ++   G+      Y  ++    K+ 
Sbjct: 269 --------GNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGCIVKLFTKAG 320

Query: 215 DVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYN 274
           ++ K   +L EM+   V  +   Y  ++  Y + G    A  V + M   G+ PDIVTYN
Sbjct: 321 NMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVTYN 380

Query: 275 SLIHGFCREGRMREARRLFRDIKGAT--PNHVTYTTLIDGYCRANDLEEALRLREVMAAK 332
            L+H FC+ GRM +A  +  +I+     P   TYT+++DGY +   +++AL + + +   
Sbjct: 381 ILVHAFCKAGRMDKALGVLENIQANRLLPTIETYTSILDGYVKGGHIQKALEVFDRIKTA 440

Query: 333 GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
           G+ PGVV+YNS+L  L K  ++ +A  +L+EM    + P+  +   L   Y + GD   A
Sbjct: 441 GLRPGVVSYNSLLSGLAKARQMENARLMLDEMLANGVVPNERSYTALTEGYARAGDVEKA 500

Query: 393 MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
             +  RM +  L +D   Y AL+   CK+  M  A E+   + DAG   +  +Y  ++DG
Sbjct: 501 FGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAVEVFQQITDAGLKHNRITYCTMLDG 560

Query: 453 YCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGD 512
           +  K        LL +    G  +D   Y + I+   +    +       +M+   +  +
Sbjct: 561 WARKGELSKARDLLKDMQKHGFHLDTICYTSFIKACFRSGDTEEVTETLAVMREKKLEVN 620

Query: 513 SVIYTSLAYAYWRAGEP 529
           +  YT+L + +  A +P
Sbjct: 621 ARTYTTLIHGWLAAADP 637



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 83/338 (24%), Positives = 173/338 (51%), Gaps = 2/338 (0%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           L + ++M  H + P+     ++++  A+       +KV++ MV  G+  +I  YN+L+HA
Sbjct: 326 LDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVTYNILVHA 385

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
            CK+  +DK   +L  ++   +   + TY +++  Y K G   +AL V DR++  G+ P 
Sbjct: 386 FCKAGRMDKALGVLENIQANRLLPTIETYTSILDGYVKGGHIQKALEVFDRIKTAGLRPG 445

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLRE 327
           +V+YNSL+ G  +  +M  AR +  ++   G  PN  +YT L +GY RA D+E+A  + +
Sbjct: 446 VVSYNSLLSGLAKARQMENARLMLDEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQ 505

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
            M  + +   +V Y ++L+  CK G ++ A  +  ++ +  +  + +T  T+++ + + G
Sbjct: 506 RMKKENLAIDIVAYGALLKACCKSGAMQRAVEVFQQITDAGLKHNRITYCTMLDGWARKG 565

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
           + + A  +   M + G  LD   Y + I    ++ + +   E L  M +     +  +Y+
Sbjct: 566 ELSKARDLLKDMQKHGFHLDTICYTSFIKACFRSGDTEEVTETLAVMREKKLEVNARTYT 625

Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
            L+ G+    + +  +   ++  + GL +D ++   L+
Sbjct: 626 TLIHGWLAAADPDQAISCYEQAKASGLQLDSALSNCLL 663



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 103/473 (21%), Positives = 220/473 (46%), Gaps = 14/473 (2%)

Query: 85  IHILTKNKH-FKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANL 143
           +HI T   H +  A++M   +A      T  +L+  +++      N  V   ++  YA+ 
Sbjct: 166 VHIYTSLIHAYAEARDMEGAVAC-----TEEMLSQGIQL------NEAVFCSIISGYASA 214

Query: 144 KMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLY 203
              +     F++ +  NL+P       ++ +  +    + V  +  +M + G   N+ LY
Sbjct: 215 GNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNMETVEALLAQMEEEGFQGNLGLY 274

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER 263
             +++   +  D +K       ++   +     TY  ++ L+ K G   +AL + + M++
Sbjct: 275 TTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEEMDK 334

Query: 264 EGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEE 321
            G+SP+ + Y  ++ G+ R G    A +++ D+   G  P+ VTY  L+  +C+A  +++
Sbjct: 335 HGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVTYNILVHAFCKAGRMDK 394

Query: 322 ALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
           AL + E + A  + P + TY SIL    K G I+ A  + + +    + P  V+ N+L++
Sbjct: 395 ALGVLENIQANRLLPTIETYTSILDGYVKGGHIQKALEVFDRIKTAGLRPGVVSYNSLLS 454

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
              K     +A  + + ML  G++ ++ +Y AL  G+ +A +++ A  +   M     + 
Sbjct: 455 GLAKARQMENARLMLDEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENLAI 514

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
              +Y  L+   C     +  +++  +    GL  +   Y  ++  + +K ++  A+ L 
Sbjct: 515 DIVAYGALLKACCKSGAMQRAVEVFQQITDAGLKHNRITYCTMLDGWARKGELSKARDLL 574

Query: 502 NLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSF 554
             MQ +G   D++ YTS   A +R+G+ +  ++ L  M  ++L +  + Y + 
Sbjct: 575 KDMQKHGFHLDTICYTSFIKACFRSGDTEEVTETLAVMREKKLEVNARTYTTL 627



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 90/332 (27%), Positives = 149/332 (44%), Gaps = 2/332 (0%)

Query: 235 LFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR 294
           L  Y  L+  Y + G    A A  + M    I P++  Y SLIH +     M  A     
Sbjct: 131 LREYGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVACTE 190

Query: 295 DI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEG 352
           ++  +G   N   + ++I GY  A + E A    E   A+ + PG + YNSI++  C+ G
Sbjct: 191 EMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAG 250

Query: 353 RIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYK 412
            +     LL +M E+    +     T++N + +I D    +   +R+   GL     TY 
Sbjct: 251 NMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYG 310

Query: 413 ALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSR 472
            ++  F KA  M  A ++L  M   G SP+   Y+ ++DGY    +  A  K+ ++ VS 
Sbjct: 311 CIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSA 370

Query: 473 GLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKAC 532
           GL  D+  Y  L+  FCK  ++D A  +   +Q N +L     YTS+   Y + G  +  
Sbjct: 371 GLKPDIVTYNILVHAFCKAGRMDKALGVLENIQANRLLPTIETYTSILDGYVKGGHIQKA 430

Query: 533 SDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
            ++ D +    L   +  Y S  +  AK  ++
Sbjct: 431 LEVFDRIKTAGLRPGVVSYNSLLSGLAKARQM 462



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 72/293 (24%), Positives = 128/293 (43%), Gaps = 27/293 (9%)

Query: 59  LSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLST----PS 114
            + AF  W +      K  + ++  ++H   K      A  +LE I     L T     S
Sbjct: 357 FTAAFKVWEDMVSAGLKPDIVTYNILVHAFCKAGRMDKALGVLENIQANRLLPTIETYTS 416

Query: 115 VLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNS 174
           +L+  VK         H+              Q  L+VFD+++   L P + +   LL+ 
Sbjct: 417 ILDGYVK-------GGHI--------------QKALEVFDRIKTAGLRPGVVSYNSLLSG 455

Query: 175 LAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRAD 234
           LAK R  +    +  +M+  GVV N   Y  L     ++ DV+K   +   M+ +++  D
Sbjct: 456 LAKARQMENARLMLDEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENLAID 515

Query: 235 LFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR 294
           +  Y  L+   CK G    A+ V  ++   G+  + +TY +++ G+ R+G + +AR L +
Sbjct: 516 IVAYGALLKACCKSGAMQRAVEVFQQITDAGLKHNRITYCTMLDGWARKGELSKARDLLK 575

Query: 295 DIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSIL 345
           D++  G   + + YT+ I    R+ D EE      VM  K +     TY +++
Sbjct: 576 DMQKHGFHLDTICYTSFIKACFRSGDTEEVTETLAVMREKKLEVNARTYTTLI 628



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/244 (20%), Positives = 95/244 (38%), Gaps = 2/244 (0%)

Query: 336 PGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKV 395
           P +  Y  ++    + G    A      M    I P+     +LI+AY +  D   A+  
Sbjct: 129 PVLREYGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVAC 188

Query: 396 KNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCN 455
              ML  G+ L++  + ++I G+  A   + A+            P    Y+ +V  YC 
Sbjct: 189 TEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQ 248

Query: 456 KNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVI 515
             N E +  LL +    G   ++ +Y  ++  F +    +     F+ ++  G+   +  
Sbjct: 249 AGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAAT 308

Query: 516 YTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLF--WSHVV 573
           Y  +   + +AG      DIL++M +  +     IY      YA+  +    F  W  +V
Sbjct: 309 YGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMV 368

Query: 574 DRGL 577
             GL
Sbjct: 369 SAGL 372


>gi|115482788|ref|NP_001064987.1| Os10g0501700 [Oryza sativa Japonica Group]
 gi|22165069|gb|AAM93686.1| putative leaf protein [Oryza sativa Japonica Group]
 gi|31432904|gb|AAP54480.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
           Japonica Group]
 gi|113639596|dbj|BAF26901.1| Os10g0501700 [Oryza sativa Japonica Group]
 gi|125575306|gb|EAZ16590.1| hypothetical protein OsJ_32064 [Oryza sativa Japonica Group]
          Length = 454

 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 119/440 (27%), Positives = 205/440 (46%), Gaps = 41/440 (9%)

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
           P + +   +++ L K+   D  +  Y +M+   V  +   YN +I A  K+  +D+  ++
Sbjct: 9   PDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEV 68

Query: 223 LCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR 282
           L  M    V  + FTYN+++  YC  G   +A+ +  +M  +GI PD+VTYNSL+   C+
Sbjct: 69  LTVM----VMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCK 124

Query: 283 EGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVT 340
            G+  EAR++F  +  +G  P+  TY TL+ GY     L E   L  +M   G+      
Sbjct: 125 NGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHV 184

Query: 341 YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML 400
           +N ++    K+ ++ +   + ++M ++ + P+ V   T+I+  CK+G    AM    +M+
Sbjct: 185 FNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMI 244

Query: 401 EAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP----------SYC------ 444
           + GL  +   Y +LIH  C   + + A+EL+F +LD G +P          S C      
Sbjct: 245 DKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVI 304

Query: 445 -------------------SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
                              +YS L+DGYC     +  +KLL   VS GL  D   Y  LI
Sbjct: 305 ESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLI 364

Query: 486 RRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
             +CK  +++ A  LF  M+ NG+  D + Y  + +  +R     A  ++   +      
Sbjct: 365 NGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYARITESGTQ 424

Query: 546 ITLKIYRSFSASYAKDNEIL 565
           + L  Y      +AK N ++
Sbjct: 425 LELSTYNIILMDFAKTNSLM 444



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 120/428 (28%), Positives = 206/428 (48%), Gaps = 18/428 (4%)

Query: 80  SHWTMIHILTK----NKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSW 135
           S+ T+I  L K    +K + +   ML++    D ++  S++ AL K     D    VL+ 
Sbjct: 13  SYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQA-MDRAMEVLTV 71

Query: 136 LVI-----------FYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMV 184
           +V+            Y +   ++  + +F +M    + P +     L++ L K+      
Sbjct: 72  MVMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKNGKCTEA 131

Query: 185 WKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIAL 244
            K++  MV+ G+  +I  Y  L+H       + ++  LL  M    ++ D   +N LI  
Sbjct: 132 RKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNILICA 191

Query: 245 YCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPN 302
           Y K+    E + V  +M ++G++P+ V Y ++I G C+ GR+ +A   F  +  KG TPN
Sbjct: 192 YTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGLTPN 251

Query: 303 HVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLN 362
            V YT+LI   C  +  E+A  L   +  +G+ P +V +N+IL  LCKEGR+ ++ +L +
Sbjct: 252 VVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKKLFD 311

Query: 363 EMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAK 422
            +    + PD +T +TLI+ YC  G    AMK+   M+  GL  D  TY  LI+G+CK  
Sbjct: 312 LLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKIN 371

Query: 423 EMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYR 482
            M+ A  L   M   G +P   +Y+ ++ G        A  +L       G  +++S Y 
Sbjct: 372 RMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYARITESGTQLELSTYN 431

Query: 483 ALIRRFCK 490
            ++  F K
Sbjct: 432 IILMDFAK 439



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 95/388 (24%), Positives = 165/388 (42%), Gaps = 80/388 (20%)

Query: 268 PDIVTYNSLIHGFCREGRMREA---------RRLFRD------IKGA------------- 299
           PD+V+YN++I G  +EG + +A         RR+  D      I  A             
Sbjct: 9   PDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEV 68

Query: 300 -----TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRI 354
                 PN  TY +++ GYC +   E+A+ +   M + G+ P VVTYNS++  LCK G+ 
Sbjct: 69  LTVMVMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKNGKC 128

Query: 355 RDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTAS-----AMKVKN------------ 397
            +A ++ + M ++ + PD  T  TL++ Y   G         A+ V+N            
Sbjct: 129 TEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNIL 188

Query: 398 ------------------RMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGF 439
                             +M + GL  +   Y+ +I G CK   +D A      M+D G 
Sbjct: 189 ICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGL 248

Query: 440 SPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQR 499
           +P+   Y+ L+   C  +  E   +L+ E + +G+  ++  +  ++   CK+ +V  +++
Sbjct: 249 TPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKK 308

Query: 500 LFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYA 559
           LF+L+   G+  D + Y++L   Y  AG+      +L  M    L      Y +    Y 
Sbjct: 309 LFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYC 368

Query: 560 KDNEILDLFWSHVVDRGLMSKHIFKEMQ 587
           K N + D               +FKEM+
Sbjct: 369 KINRMEDALA------------LFKEME 384



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 57/215 (26%), Positives = 103/215 (47%), Gaps = 6/215 (2%)

Query: 365 NEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEM 424
           ++ +  PD V+ NT+I+   K GD   A    + ML+  +  D  TY ++I    KA+ M
Sbjct: 3   DDGRCPPDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAM 62

Query: 425 DIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRAL 484
           D A E+L  M+     P+  +Y+ ++ GYC+    E  + +  +  S G+  DV  Y +L
Sbjct: 63  DRAMEVLTVMV----MPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSL 118

Query: 485 IRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL 544
           +   CK  K   A+++F+ M   G+  D   Y +L + Y   G      D+L  M +  +
Sbjct: 119 MDYLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGM 178

Query: 545 MITLKIYRSFSASYAKDNEILD--LFWSHVVDRGL 577
            +   ++     +Y K  ++ +  L +S +  +GL
Sbjct: 179 QLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGL 213


>gi|115482590|ref|NP_001064888.1| Os10g0484300 [Oryza sativa Japonica Group]
 gi|22094354|gb|AAM91881.1| putative membrane-associated salt-inducible protein [Oryza sativa
           Japonica Group]
 gi|31432736|gb|AAP54334.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|78708824|gb|ABB47799.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639497|dbj|BAF26802.1| Os10g0484300 [Oryza sativa Japonica Group]
          Length = 578

 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 112/383 (29%), Positives = 190/383 (49%), Gaps = 7/383 (1%)

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
           P   +   LL  L   +  D+  K ++  ++  V  +I+ +N +I   C+   + K   +
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 223 LCEMEFKDVRADLFTYNTLIALYCKKG----MHYEALAVQDRMEREGISPDIVTYNSLIH 278
             +++   +   + TYN+LI  YCKKG    M++  + +++ +E  GISP  VT+  LI+
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVE-AGISPTAVTFGVLIN 272

Query: 279 GFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYP 336
           G+C+      A R+F ++K  G   + VTY +LI G C    +EE ++L E M   G+ P
Sbjct: 273 GYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSP 332

Query: 337 GVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVK 396
             +T+  +L+  CK+G + DAN  ++ M E+ + PD V  N LI+ Y ++G    AM VK
Sbjct: 333 NEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVK 392

Query: 397 NRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNK 456
             M + G+  +  TY  LI GF ++ +   A  LL  M + G      +Y+ L+   C K
Sbjct: 393 EAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCK 452

Query: 457 NNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIY 516
                 +KLLDE    GL  +   Y  +I+ FC K  +  A  +   M+      + V Y
Sbjct: 453 GEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTY 512

Query: 517 TSLAYAYWRAGEPKACSDILDDM 539
                 + + G+    +D+L++M
Sbjct: 513 NVFIKYFCQIGKMDEANDLLNEM 535



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 102/308 (33%), Positives = 162/308 (52%), Gaps = 2/308 (0%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           +  +M    + P      VL+N   K+  T    +V+++M Q G+ A++  YN LI   C
Sbjct: 251 LLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLC 310

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
               V++  KL+ EME   +  +  T+  ++  +CKKGM  +A    D M    + PD+V
Sbjct: 311 SEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVV 370

Query: 272 TYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
            YN LI  + R G+M +A  +   +  KG +PN  TY  LI G+ R+ D   A  L + M
Sbjct: 371 IYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEM 430

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
             KG+   VVTYN ++  LC +G +R A +LL+EM+E  + P+++T NT+I  +C  G+ 
Sbjct: 431 KEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNI 490

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
            SA +++ RM +     +  TY   I  FC+  +MD A +LL  MLD    P+  +Y  +
Sbjct: 491 KSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETI 550

Query: 450 VDGYCNKN 457
            +G   K 
Sbjct: 551 KEGMMEKG 558



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 109/390 (27%), Positives = 196/390 (50%), Gaps = 9/390 (2%)

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER 263
           N L+     +  VD  EK       + V  D++T+NT+I+  C+ G   +A  V   ++ 
Sbjct: 160 NALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKA 219

Query: 264 EGISPDIVTYNSLIHGFCREG---RMREARRLFRDI--KGATPNHVTYTTLIDGYCRAND 318
            G++P + TYNSLI G+C++G    M     L +++   G +P  VT+  LI+GYC+ ++
Sbjct: 220 WGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSN 279

Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT 378
              A+R+ E M  +G+   VVTYNS++  LC EG++ +  +L+ EM +  ++P+ +T   
Sbjct: 280 TAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGC 339

Query: 379 LINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAG 438
           ++  +CK G  A A    + M E  +  D   Y  LI  + +  +M+ A  +   M   G
Sbjct: 340 VLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKG 399

Query: 439 FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQ 498
            SP+  +Y+ L+ G+    +  +   LLDE   +G+  DV  Y  LI   C K +V  A 
Sbjct: 400 ISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAV 459

Query: 499 RLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDI---LDDMYRRRLMITLKIYRSFS 555
           +L + M   G+  + + Y ++   +   G  K+  +I   ++   +R  ++T  ++  + 
Sbjct: 460 KLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYF 519

Query: 556 ASYAKDNEILDLFWSHVVDRGLMSKHIFKE 585
               K +E  DL  + ++D+ L+   I  E
Sbjct: 520 CQIGKMDEANDLL-NEMLDKCLVPNGITYE 548



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 94/298 (31%), Positives = 155/298 (52%), Gaps = 2/298 (0%)

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
           K+MV+ G+      + VLI+  CK+S+     ++  EM+ + + A + TYN+LI+  C +
Sbjct: 253 KEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSE 312

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTY 306
           G   E + + + ME  G+SP+ +T+  ++ GFC++G M +A      +  +   P+ V Y
Sbjct: 313 GKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIY 372

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
             LID Y R   +E+A+ ++E MA KG+ P V TYN ++    + G  R A+ LL+EM E
Sbjct: 373 NILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKE 432

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
           K I  D VT N LI A C  G+   A+K+ + M E GL  +  TY  +I GFC    +  
Sbjct: 433 KGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKS 492

Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRAL 484
           A E+   M       +  +Y+  +  +C     +    LL+E + + L  +   Y  +
Sbjct: 493 AYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETI 550



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 65/266 (24%), Positives = 122/266 (45%), Gaps = 3/266 (1%)

Query: 301 PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRL 360
           P+  +   L+ G   A  ++ A +       + V P + T+N+++  LC+ G++R A  +
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 361 LNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVK---NRMLEAGLMLDQFTYKALIHG 417
             ++    +AP   T N+LI+ YCK G   +   V      M+EAG+     T+  LI+G
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273

Query: 418 FCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVD 477
           +CK      A  +   M   G + S  +Y+ L+ G C++   E  +KL++E    GL  +
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPN 333

Query: 478 VSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILD 537
              +  +++ FCKK  +  A    + M    +  D VIY  L   Y R G+ +    + +
Sbjct: 334 EITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKE 393

Query: 538 DMYRRRLMITLKIYRSFSASYAKDNE 563
            M ++ +   +  Y      +++  +
Sbjct: 394 AMAKKGISPNVTTYNCLITGFSRSGD 419



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 82/335 (24%), Positives = 144/335 (42%), Gaps = 22/335 (6%)

Query: 25  HWAKLLNPNIASSLTSTAI-HKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWT 83
           H   LL   + + ++ TA+   VL+N Y  C   + + A   + E        S+ ++ +
Sbjct: 247 HVDMLLKEMVEAGISPTAVTFGVLINGY--CKNSNTAAAVRVFEEMKQQGIAASVVTYNS 304

Query: 84  MIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANL 143
           +I  L      +    ++E+  + D   +P               N      ++  +   
Sbjct: 305 LISGLCSEGKVEEGVKLMEE--MEDLGLSP---------------NEITFGCVLKGFCKK 347

Query: 144 KMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLY 203
            M  D     D M   N+ P +    +L++   +    +    V + M + G+  N+  Y
Sbjct: 348 GMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTY 407

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER 263
           N LI    +S D      LL EM+ K + AD+ TYN LI   C KG   +A+ + D M  
Sbjct: 408 NCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSE 467

Query: 264 EGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGA--TPNHVTYTTLIDGYCRANDLEE 321
            G+ P+ +TYN++I GFC +G ++ A  +   ++      N VTY   I  +C+   ++E
Sbjct: 468 VGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDE 527

Query: 322 ALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRD 356
           A  L   M  K + P  +TY +I   + ++G   D
Sbjct: 528 ANDLLNEMLDKCLVPNGITYETIKEGMMEKGYTPD 562



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/139 (23%), Positives = 63/139 (45%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           + D+M+   +   +    VL+ +L          K+  +M ++G+  N   YN +I   C
Sbjct: 426 LLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFC 485

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
              ++    ++   ME    RA++ TYN  I  +C+ G   EA  + + M  + + P+ +
Sbjct: 486 DKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGI 545

Query: 272 TYNSLIHGFCREGRMREAR 290
           TY ++  G   +G   + R
Sbjct: 546 TYETIKEGMMEKGYTPDIR 564


>gi|302784232|ref|XP_002973888.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
 gi|300158220|gb|EFJ24843.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
          Length = 399

 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 116/374 (31%), Positives = 176/374 (47%), Gaps = 18/374 (4%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D    F  +R H L   L A   LL  + +               Q G+     +YN  +
Sbjct: 17  DNYTYFVLVRAHCLAGELQAAMDLLREMEQ---------------QPGMAPTPSMYNFFV 61

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           HA CKS  V +  +++  M+    + D+ T+NTLIA  CK G   EA  V D MER G +
Sbjct: 62  HALCKSGKVPEAMEVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFA 121

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLRE 327
            ++VTYN+LI+G    GR  EA  + + +   TP+  TY  +I G+C++ +++ A    E
Sbjct: 122 ANLVTYNTLINGLSSAGRSGEAVLVMQGMT-TTPDTQTYNAIIHGFCKSGEIDRAYGFLE 180

Query: 328 VMAAK-GVYPGVVTYNSILRKLCKEGRIRDANRLLNEM-NEKKIAPDNVTCNTLINAYCK 385
            M  + G  P   TY+ ++  LCK   +R A+ LL EM   K      V  NTL++ YCK
Sbjct: 181 EMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCK 240

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
             D   A ++ + MLE G   D  TY  +I G C+  ++D    LL  M+  G  P   +
Sbjct: 241 AQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVT 300

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+ LV G C         +L+   +  G   +   Y  +    CK +K+D A  L   ++
Sbjct: 301 YTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIR 360

Query: 506 GNGILGDSVIYTSL 519
             G + D V + +L
Sbjct: 361 DKGRITDVVAFEAL 374



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 95/300 (31%), Positives = 146/300 (48%), Gaps = 8/300 (2%)

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMERE-GISPDIVTYNSLIHGFCREGRMREARRL 292
           D +TY  L+  +C  G    A+ +   ME++ G++P    YN  +H  C+ G++ EA  +
Sbjct: 17  DNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEV 76

Query: 293 FRDIKGAT--PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
            +++K     P+ VT+ TLI G C+A  L+EA ++ + M   G    +VTYN+++  L  
Sbjct: 77  VKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSS 136

Query: 351 EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLE-AGLMLDQF 409
            GR  +A  ++  M      PD  T N +I+ +CK G+   A      M + AG   D F
Sbjct: 137 AGRSGEAVLVMQGMT---TTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTF 193

Query: 410 TYKALIHGFCKAKEMDIAKELLFGMLD-AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
           TY  LI+G CK+  +  A ELL  M+       S  +++ LVDGYC   + +   +LL  
Sbjct: 194 TYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSS 253

Query: 469 FVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
            +  G   DV  Y  +I   C+   VD    L   M   G   D V YT L     +AG+
Sbjct: 254 MLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGK 313



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 55/124 (44%), Gaps = 1/124 (0%)

Query: 405 MLDQFTYKALIHGFCKAKEMDIAKELLFGM-LDAGFSPSYCSYSWLVDGYCNKNNEEALL 463
           + D +TY  L+   C A E+  A +LL  M    G +P+   Y++ V   C        +
Sbjct: 15  LFDNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAM 74

Query: 464 KLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAY 523
           +++          DV  +  LI   CK  ++D AQ++ + M+ +G   + V Y +L    
Sbjct: 75  EVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGL 134

Query: 524 WRAG 527
             AG
Sbjct: 135 SSAG 138



 Score = 40.0 bits (92), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 28/111 (25%), Positives = 44/111 (39%), Gaps = 1/111 (0%)

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSR-GLCVDVSVYRALIRRFCKKEKVDYAQRLFNL 503
           +Y  LV  +C     +A + LL E   + G+    S+Y   +   CK  KV  A  +   
Sbjct: 20  TYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKN 79

Query: 504 MQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSF 554
           M+      D V + +L     +AG       +LD+M R      L  Y + 
Sbjct: 80  MKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTL 130


>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
 gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
          Length = 782

 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 114/386 (29%), Positives = 191/386 (49%), Gaps = 4/386 (1%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           ++L+ +V+    PD   HV + L+  YA  +     + VF +MR H L P++     +++
Sbjct: 362 ALLDLMVRNGIQPD--HHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVID 419

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
            L K    D     +++M+  G+  NI +Y  LIH  C     DK E+L+ EM  + +  
Sbjct: 420 VLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICL 479

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           +   +N++I  +CK+G   E+  + D M R G+ PDI+TYN+LI G C  G+M EA +L 
Sbjct: 480 NTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLL 539

Query: 294 RDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
             +   G  P+ VTY TLI+GYCR + +++AL L + M + GV P ++TYN IL+ L   
Sbjct: 540 ASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHT 599

Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
            R   A  L   + +     +  T N +++  CK   T  A+++   +    L L+  T+
Sbjct: 600 RRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTF 659

Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
             +I    K   MD AK+L       G  P   +YS + +    + + E L  L      
Sbjct: 660 NIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEE 719

Query: 472 RGLCVDVSVYRALIRRFCKKEKVDYA 497
            G   D  +  +++R+  ++  +  A
Sbjct: 720 NGCSADSRMLNSIVRKLLQRGDITRA 745



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 107/390 (27%), Positives = 192/390 (49%), Gaps = 4/390 (1%)

Query: 115 VLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNS 174
           VLN +VK    PD  ++  + ++  Y +    ++ +    +MR   + P++   + L+N 
Sbjct: 258 VLNTMVKNGVMPDCMTY--NSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNY 315

Query: 175 LAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRAD 234
           L K+  +    K++  M + G+  +I  Y  L+        + ++  LL  M    ++ D
Sbjct: 316 LCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPD 375

Query: 235 LFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR 294
              +N LI  Y K+    +A+ V  +M + G++P++V Y ++I   C+ G + +A   F 
Sbjct: 376 HHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFE 435

Query: 295 DI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEG 352
            +  +G TPN + YT+LI G C  +  ++A  L   M  +G+    + +NSI+   CKEG
Sbjct: 436 QMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEG 495

Query: 353 RIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYK 412
           R+ ++ +L + M    + PD +T NTLI+  C  G    A K+   M+  G+  D  TY 
Sbjct: 496 RVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYG 555

Query: 413 ALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSR 472
            LI+G+C+   MD A  L   M+ +G SP+  +Y+ ++ G  +     A  +L       
Sbjct: 556 TLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKS 615

Query: 473 GLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
           G  +++S Y  ++   CK    D A R+F 
Sbjct: 616 GTQLELSTYNIILHGLCKNNLTDEALRMFQ 645



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 115/417 (27%), Positives = 194/417 (46%), Gaps = 10/417 (2%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG---VVANIHLY 203
           +D   VFD++        ++     L  +A+      V + Y +M + G   V   +H Y
Sbjct: 37  EDARHVFDELLRRGRGASIYGLNRALADVARHSPAAAVSR-YNRMARAGAGKVTPTVHTY 95

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL-AVQDRME 262
            +LI  CC++  +D     L  +  K  R D  T+  L+   C      +A+  V  RM 
Sbjct: 96  AILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMT 155

Query: 263 REGISPDIVTYNSLIHGFCREGRMREARRLFRDIK-----GATPNHVTYTTLIDGYCRAN 317
             G  PD+ +YN+L+ G C E R +EA  L   +      G+ P+ V+Y T+++G+ +  
Sbjct: 156 ELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEG 215

Query: 318 DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCN 377
           D ++A      M  +G+ P VVTY+SI+  LCK   +  A  +LN M +  + PD +T N
Sbjct: 216 DSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYN 275

Query: 378 TLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA 437
           ++++ YC  G    A+    +M   G+  +  TY +L++  CK      A+++   M   
Sbjct: 276 SILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKR 335

Query: 438 GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYA 497
           G  P   +Y  L+ GY  K     +  LLD  V  G+  D  V+  LI  + K+EKVD A
Sbjct: 336 GLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQA 395

Query: 498 QRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSF 554
             +F+ M+ +G+  + V Y ++     ++G         + M    L   + +Y S 
Sbjct: 396 MLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSL 452



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 106/393 (26%), Positives = 193/393 (49%), Gaps = 8/393 (2%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLA-KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           ++FD M    L P +     LL   A K  L +M   +   MV+ G+  + H++N+LI A
Sbjct: 327 KIFDSMTKRGLEPDIATYRTLLQGYATKGALVEM-HALLDLMVRNGIQPDHHVFNILICA 385

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
             K   VD+   +  +M    +  ++  Y T+I + CK G   +A+   ++M  EG++P+
Sbjct: 386 YAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPN 445

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLRE 327
           I+ Y SLIHG C   +  +A  L  ++  +G   N + + ++ID +C+   + E+ +L +
Sbjct: 446 IIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFD 505

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
           +M   GV P ++TYN+++   C  G++ +A +LL  M    + PD VT  TLIN YC++ 
Sbjct: 506 LMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVS 565

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
               A+ +   M+ +G+  +  TY  ++ G    +    AKEL   +  +G      +Y+
Sbjct: 566 RMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYN 625

Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGN 507
            ++ G C  N  +  L++        L ++   +  +I    K  ++D A+ LF     N
Sbjct: 626 IILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSAN 685

Query: 508 GILGDSVIYTSLAYAYWRAGEPKACSDILDDMY 540
           G++ D   Y+ +A      G  +     LDD++
Sbjct: 686 GLVPDVRTYSLMAENLIEQGSLEE----LDDLF 714



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 105/381 (27%), Positives = 187/381 (49%), Gaps = 10/381 (2%)

Query: 169 TVLLNSLAKD-RLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEME 227
           T LL  L  D R +D +  V ++M +LG + ++  YN L+   C  +   +  +LL  M 
Sbjct: 131 TPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMM- 189

Query: 228 FKDVRA-----DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR 282
             D R      D+ +YNT++  + K+G   +A +    M   GI PD+VTY+S+I   C+
Sbjct: 190 -ADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCK 248

Query: 283 EGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVT 340
              M +A  +   +   G  P+ +TY +++ GYC +   +EA+   + M + GV P VVT
Sbjct: 249 AQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVT 308

Query: 341 YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML 400
           Y+S++  LCK GR  +A ++ + M ++ + PD  T  TL+  Y   G       + + M+
Sbjct: 309 YSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMV 368

Query: 401 EAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEE 460
             G+  D   +  LI  + K +++D A  +   M   G +P+   Y  ++D  C   + +
Sbjct: 369 RNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVD 428

Query: 461 ALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLA 520
             +   ++ +  GL  ++ VY +LI   C  +K D A+ L   M   GI  +++ + S+ 
Sbjct: 429 DAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSII 488

Query: 521 YAYWRAGEPKACSDILDDMYR 541
            ++ + G       + D M R
Sbjct: 489 DSHCKEGRVIESEKLFDLMVR 509



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 103/412 (25%), Positives = 194/412 (47%), Gaps = 6/412 (1%)

Query: 161 LMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDV-DKV 219
           + P +H   +L+    +    D+ +     +V+ G   +   +  L+   C      D +
Sbjct: 88  VTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAM 147

Query: 220 EKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMERE---GISPDIVTYNSL 276
           + +L  M       D+F+YN L+   C +    EAL +   M  +   G  PD+V+YN++
Sbjct: 148 DIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTV 207

Query: 277 IHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGV 334
           ++GF +EG   +A   + ++  +G  P+ VTY+++I   C+A  +++A+ +   M   GV
Sbjct: 208 LNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGV 267

Query: 335 YPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMK 394
            P  +TYNSIL   C  G+ ++A   L +M    + P+ VT ++L+N  CK G +  A K
Sbjct: 268 MPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARK 327

Query: 395 VKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYC 454
           + + M + GL  D  TY+ L+ G+     +     LL  M+  G  P +  ++ L+  Y 
Sbjct: 328 IFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYA 387

Query: 455 NKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSV 514
            +   +  + +  +    GL  +V  Y  +I   CK   VD A   F  M   G+  + +
Sbjct: 388 KQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNII 447

Query: 515 IYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
           +YTSL +      +     +++ +M  R + +    + S   S+ K+  +++
Sbjct: 448 VYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIE 499



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 72/269 (26%), Positives = 110/269 (40%), Gaps = 72/269 (26%)

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
           K++  MV++GV  +I  YN LI  CC +  +D+  KLL  M    V+ D+ TY TLI  Y
Sbjct: 502 KLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGY 561

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNH 303
           C+     +ALA+   M   G+SP+I+TYN ++ G     R   A+ L+  I   G     
Sbjct: 562 CRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLEL 621

Query: 304 VTYTTLIDGYCRANDLEEALRLREVM---------------------------------- 329
            TY  ++ G C+ N  +EALR+ + +                                  
Sbjct: 622 STYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAA 681

Query: 330 -AAKGVYPGVVTY-----------------------------------NSILRKLCKEGR 353
            +A G+ P V TY                                   NSI+RKL + G 
Sbjct: 682 HSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGD 741

Query: 354 IRDANRLLNEMNEKKIAPDNVTCNTLINA 382
           I  A   L  ++EK  + +  T + L+ +
Sbjct: 742 ITRAGTYLFMIDEKHFSLEASTASFLLES 770


>gi|302771513|ref|XP_002969175.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
 gi|300163680|gb|EFJ30291.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
          Length = 399

 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 116/374 (31%), Positives = 176/374 (47%), Gaps = 18/374 (4%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D    F  +R H L   L A   LL  + +               Q G+     +YN  +
Sbjct: 17  DNYTYFVLVRAHCLAGELQAAMDLLREMEQ---------------QPGMAPTPSMYNFFV 61

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           HA CKS  V +  +++  M+    + D+ T+NTLIA  CK G   EA  V D MER G +
Sbjct: 62  HALCKSGKVPEAMEVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFA 121

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLRE 327
            ++VTYN+LI+G    GR  EA  + + +   TP+  TY  +I G+C++ +++ A    E
Sbjct: 122 ANLVTYNTLINGLSSAGRSGEAVLVMQGMT-TTPDTQTYNAIIHGFCKSGEIDRAYGFLE 180

Query: 328 VMAAK-GVYPGVVTYNSILRKLCKEGRIRDANRLLNEM-NEKKIAPDNVTCNTLINAYCK 385
            M  + G  P   TY+ ++  LCK   +R A+ LL EM   K      V  NTL++ YCK
Sbjct: 181 EMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCK 240

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
             D   A ++ + MLE G   D  TY  +I G C+  ++D    LL  M+  G  P   +
Sbjct: 241 AQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVT 300

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+ LV G C         +L+   +  G   +   Y  +    CK +K+D A  L   ++
Sbjct: 301 YTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIR 360

Query: 506 GNGILGDSVIYTSL 519
             G + D V + +L
Sbjct: 361 DKGRVTDVVAFETL 374



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 95/300 (31%), Positives = 146/300 (48%), Gaps = 8/300 (2%)

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMERE-GISPDIVTYNSLIHGFCREGRMREARRL 292
           D +TY  L+  +C  G    A+ +   ME++ G++P    YN  +H  C+ G++ EA  +
Sbjct: 17  DNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEV 76

Query: 293 FRDIKGAT--PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
            +++K     P+ VT+ TLI G C+A  L+EA ++ + M   G    +VTYN+++  L  
Sbjct: 77  VKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSS 136

Query: 351 EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLE-AGLMLDQF 409
            GR  +A  ++  M      PD  T N +I+ +CK G+   A      M + AG   D F
Sbjct: 137 AGRSGEAVLVMQGMT---TTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTF 193

Query: 410 TYKALIHGFCKAKEMDIAKELLFGMLD-AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
           TY  LI+G CK+  +  A ELL  M+       S  +++ LVDGYC   + +   +LL  
Sbjct: 194 TYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSS 253

Query: 469 FVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
            +  G   DV  Y  +I   C+   VD    L   M   G   D V YT L     +AG+
Sbjct: 254 MLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGK 313



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 55/124 (44%), Gaps = 1/124 (0%)

Query: 405 MLDQFTYKALIHGFCKAKEMDIAKELLFGM-LDAGFSPSYCSYSWLVDGYCNKNNEEALL 463
           + D +TY  L+   C A E+  A +LL  M    G +P+   Y++ V   C        +
Sbjct: 15  LFDNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAM 74

Query: 464 KLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAY 523
           +++          DV  +  LI   CK  ++D AQ++ + M+ +G   + V Y +L    
Sbjct: 75  EVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGL 134

Query: 524 WRAG 527
             AG
Sbjct: 135 SSAG 138



 Score = 39.7 bits (91), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 28/111 (25%), Positives = 44/111 (39%), Gaps = 1/111 (0%)

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSR-GLCVDVSVYRALIRRFCKKEKVDYAQRLFNL 503
           +Y  LV  +C     +A + LL E   + G+    S+Y   +   CK  KV  A  +   
Sbjct: 20  TYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKN 79

Query: 504 MQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSF 554
           M+      D V + +L     +AG       +LD+M R      L  Y + 
Sbjct: 80  MKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTL 130


>gi|242058007|ref|XP_002458149.1| hypothetical protein SORBIDRAFT_03g027690 [Sorghum bicolor]
 gi|241930124|gb|EES03269.1| hypothetical protein SORBIDRAFT_03g027690 [Sorghum bicolor]
          Length = 795

 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 122/459 (26%), Positives = 213/459 (46%), Gaps = 38/459 (8%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           L +FD+     + P     TVL+     + +TD  +K+ ++M++ G++ + + +N++I  
Sbjct: 314 LDLFDEAVRDGVTPTNVTYTVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKG 373

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
             ++   +    L  ++       D+FTY  LI    K    +EA+ + D+M+  G+ P 
Sbjct: 374 LLRNKQWEDAIALF-DLVVDTGVPDVFTYGCLIHWLSKHHKVHEAVNLWDKMKEAGVKPS 432

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLRE 327
           IVT +SL+ G+C +G M EA +L+ ++  KG  PN VTYTTL+ GY +    ++A  L  
Sbjct: 433 IVTCHSLLLGYCEKGCMDEALKLYSEMPGKGFPPNEVTYTTLMKGYIKKKAFDKAYALLN 492

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
            M   GV  G  TYN ++  LC   R+ + + +L     +   P  +T N++IN + K G
Sbjct: 493 EMHQNGVSCGEYTYNILINGLCMVDRVCEVDEMLKRFVSEGFVPTTMTYNSIINGFVKAG 552

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
              SA+ +  +M E G+  +  TY + I G+C+    D+A +LL  M   G  P   +Y+
Sbjct: 553 MMGSALAMYRQMCEKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYMRCNGIHPDIAAYN 612

Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRA------------------------ 483
             ++ +C + N    L  L   +  GL  +V+VY +                        
Sbjct: 613 AFINMFCKQGNMSHALHFLVLLLKDGLTPNVTVYNSFVTGYKNLKMMAEASKFYYSMIKQ 672

Query: 484 -----------LIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKAC 532
                      LI  F K   V +A  L++ M  N  + D   +T+L +   R+G+    
Sbjct: 673 RIAADTEIYTTLIDGFSKVGNVAFALELYSEMLANHNIPDDKTFTALTHGLCRSGDIDGA 732

Query: 533 SDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSH 571
             +LDDM R  +      Y     ++ +D ++ + F  H
Sbjct: 733 KRLLDDMTRLDVCPNTVTYNMLINAHIRDGKLQEAFQLH 771



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 109/372 (29%), Positives = 168/372 (45%), Gaps = 2/372 (0%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
            + + ++D+M+   + P +  C  LL    +    D   K+Y +M   G   N   Y  L
Sbjct: 415 HEAVNLWDKMKEAGVKPSIVTCHSLLLGYCEKGCMDEALKLYSEMPGKGFPPNEVTYTTL 474

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           +    K    DK   LL EM    V    +TYN LI   C      E   +  R   EG 
Sbjct: 475 MKGYIKKKAFDKAYALLNEMHQNGVSCGEYTYNILINGLCMVDRVCEVDEMLKRFVSEGF 534

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
            P  +TYNS+I+GF + G M  A  ++R +  KG TPN VTYT+ IDGYCR N  + A++
Sbjct: 535 VPTTMTYNSIINGFVKAGMMGSALAMYRQMCEKGITPNIVTYTSFIDGYCRTNCCDLAVK 594

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           L   M   G++P +  YN+ +   CK+G +  A   L  + +  + P+    N+ +  Y 
Sbjct: 595 LLIYMRCNGIHPDIAAYNAFINMFCKQGNMSHALHFLVLLLKDGLTPNVTVYNSFVTGYK 654

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
            +   A A K    M++  +  D   Y  LI GF K   +  A EL   ML     P   
Sbjct: 655 NLKMMAEASKFYYSMIKQRIAADTEIYTTLIDGFSKVGNVAFALELYSEMLANHNIPDDK 714

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
           +++ L  G C   + +   +LLD+     +C +   Y  LI    +  K+  A +L + M
Sbjct: 715 TFTALTHGLCRSGDIDGAKRLLDDMTRLDVCPNTVTYNMLINAHIRDGKLQEAFQLHDKM 774

Query: 505 QGNGILGDSVIY 516
             +G++ D   Y
Sbjct: 775 LSSGVVPDDTTY 786



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 107/416 (25%), Positives = 196/416 (47%), Gaps = 23/416 (5%)

Query: 68  ESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPD 127
           ++ VP+    + ++  +IH L+K+     A N+ +K      +    V  ++V  H    
Sbjct: 392 DTGVPD----VFTYGCLIHWLSKHHKVHEAVNLWDK------MKEAGVKPSIVTCHS--- 438

Query: 128 GNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKV 187
                   L++ Y       + L+++ +M      P+    T L+    K +  D  + +
Sbjct: 439 --------LLLGYCEKGCMDEALKLYSEMPGKGFPPNEVTYTTLMKGYIKKKAFDKAYAL 490

Query: 188 YKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCK 247
             +M Q GV    + YN+LI+  C    V +V+++L     +       TYN++I  + K
Sbjct: 491 LNEMHQNGVSCGEYTYNILINGLCMVDRVCEVDEMLKRFVSEGFVPTTMTYNSIINGFVK 550

Query: 248 KGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRL--FRDIKGATPNHVT 305
            GM   ALA+  +M  +GI+P+IVTY S I G+CR      A +L  +    G  P+   
Sbjct: 551 AGMMGSALAMYRQMCEKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYMRCNGIHPDIAA 610

Query: 306 YTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMN 365
           Y   I+ +C+  ++  AL    ++   G+ P V  YNS +        + +A++    M 
Sbjct: 611 YNAFINMFCKQGNMSHALHFLVLLLKDGLTPNVTVYNSFVTGYKNLKMMAEASKFYYSMI 670

Query: 366 EKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMD 425
           +++IA D     TLI+ + K+G+ A A+++ + ML    + D  T+ AL HG C++ ++D
Sbjct: 671 KQRIAADTEIYTTLIDGFSKVGNVAFALELYSEMLANHNIPDDKTFTALTHGLCRSGDID 730

Query: 426 IAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVY 481
            AK LL  M      P+  +Y+ L++ +      +   +L D+ +S G+  D + Y
Sbjct: 731 GAKRLLDDMTRLDVCPNTVTYNMLINAHIRDGKLQEAFQLHDKMLSSGVVPDDTTY 786



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 119/439 (27%), Positives = 195/439 (44%), Gaps = 43/439 (9%)

Query: 126 PDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVW 185
           PD  S   + L++  A      D L +FD+MR            V++ +    R+     
Sbjct: 151 PDAKSR--TDLLVATARGASAADALTLFDEMRCKGYYADAKMYDVVMRACVVGRMHGDAV 208

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
           +++ +M   GV  +  +Y + I   CK  D D+  ++L +M    ++   FTYN+++ + 
Sbjct: 209 RLFDEMAGAGVKPDERVYAITITGLCKLRDADRAVQVLGKMREAGLKPRDFTYNSVVDVL 268

Query: 246 CKKGMHYEALAVQDRM-EREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPN 302
            K G   EAL ++D+M    G   D+    +L+ G+C  G + +A  LF +    G TP 
Sbjct: 269 VKVGRMDEALRLKDQMLLATGKKMDVFLATTLMQGYCLHGEIGKALDLFDEAVRDGVTPT 328

Query: 303 HVTYTTLIDGYCRANDL------------------------------------EEALRLR 326
           +VTYT LI G C A  +                                    E+A+ L 
Sbjct: 329 NVTYTVLIKG-CDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRNKQWEDAIALF 387

Query: 327 EVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKI 386
           +++   GV P V TY  ++  L K  ++ +A  L ++M E  + P  VTC++L+  YC+ 
Sbjct: 388 DLVVDTGV-PDVFTYGCLIHWLSKHHKVHEAVNLWDKMKEAGVKPSIVTCHSLLLGYCEK 446

Query: 387 GDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSY 446
           G    A+K+ + M   G   ++ TY  L+ G+ K K  D A  LL  M   G S    +Y
Sbjct: 447 GCMDEALKLYSEMPGKGFPPNEVTYTTLMKGYIKKKAFDKAYALLNEMHQNGVSCGEYTY 506

Query: 447 SWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQG 506
           + L++G C  +    + ++L  FVS G       Y ++I  F K   +  A  ++  M  
Sbjct: 507 NILINGLCMVDRVCEVDEMLKRFVSEGFVPTTMTYNSIINGFVKAGMMGSALAMYRQMCE 566

Query: 507 NGILGDSVIYTSLAYAYWR 525
            GI  + V YTS    Y R
Sbjct: 567 KGITPNIVTYTSFIDGYCR 585



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 109/398 (27%), Positives = 184/398 (46%), Gaps = 3/398 (0%)

Query: 144 KMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLY 203
           K  +D + +FD + V   +P +     L++ L+K         ++ KM + GV  +I   
Sbjct: 378 KQWEDAIALFD-LVVDTGVPDVFTYGCLIHWLSKHHKVHEAVNLWDKMKEAGVKPSIVTC 436

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER 263
           + L+   C+   +D+  KL  EM  K    +  TY TL+  Y KK    +A A+ + M +
Sbjct: 437 HSLLLGYCEKGCMDEALKLYSEMPGKGFPPNEVTYTTLMKGYIKKKAFDKAYALLNEMHQ 496

Query: 264 EGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEE 321
            G+S    TYN LI+G C   R+ E   + +    +G  P  +TY ++I+G+ +A  +  
Sbjct: 497 NGVSCGEYTYNILINGLCMVDRVCEVDEMLKRFVSEGFVPTTMTYNSIINGFVKAGMMGS 556

Query: 322 ALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
           AL +   M  KG+ P +VTY S +   C+      A +LL  M    I PD    N  IN
Sbjct: 557 ALAMYRQMCEKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYMRCNGIHPDIAAYNAFIN 616

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
            +CK G+ + A+     +L+ GL  +   Y + + G+   K M  A +  + M+    + 
Sbjct: 617 MFCKQGNMSHALHFLVLLLKDGLTPNVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRIAA 676

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
               Y+ L+DG+    N    L+L  E ++     D   + AL    C+   +D A+RL 
Sbjct: 677 DTEIYTTLIDGFSKVGNVAFALELYSEMLANHNIPDDKTFTALTHGLCRSGDIDGAKRLL 736

Query: 502 NLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
           + M    +  ++V Y  L  A+ R G+ +    + D M
Sbjct: 737 DDMTRLDVCPNTVTYNMLINAHIRDGKLQEAFQLHDKM 774



 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 67/146 (45%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N  V +  V  Y NLKM  +  + +  M    +       T L++  +K        ++Y
Sbjct: 642 NVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRIAADTEIYTTLIDGFSKVGNVAFALELY 701

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
            +M+    + +   +  L H  C+S D+D  ++LL +M   DV  +  TYN LI  + + 
Sbjct: 702 SEMLANHNIPDDKTFTALTHGLCRSGDIDGAKRLLDDMTRLDVCPNTVTYNMLINAHIRD 761

Query: 249 GMHYEALAVQDRMEREGISPDIVTYN 274
           G   EA  + D+M   G+ PD  TYN
Sbjct: 762 GKLQEAFQLHDKMLSSGVVPDDTTYN 787


>gi|242081015|ref|XP_002445276.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
 gi|241941626|gb|EES14771.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
          Length = 768

 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 118/458 (25%), Positives = 224/458 (48%), Gaps = 16/458 (3%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N+H  + L+  Y +    ++ +Q+  +M  H L P      VLL+ L K+        ++
Sbjct: 236 NNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGLQPDCVIYAVLLDYLCKNGRCTEARNIF 295

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
             +++ G+  ++ +Y +L+H       + ++   L  M    V  D   +N +   Y KK
Sbjct: 296 DSLIRKGIKPHVTIYGILLHGYATEGALSEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKK 355

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTY 306
            M  EA+ + D+M ++ +SP +V Y +LI   C+ GR+ +A   F  +  +G TP+   +
Sbjct: 356 AMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVF 415

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
           ++L+ G C  +  E+A +L   +  +G+      +N ++  LC+EGR+ +A RL++ M  
Sbjct: 416 SSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLR 475

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
             + PD ++ NTL++ +C  G    A K+ + M+  GL  D+FTY  L+HG+CKA+ +D 
Sbjct: 476 VDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDD 535

Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDG------YCNKNNEEALLKLLDEFVSRGLCVDVSV 480
           A  L   ML  G +P   +Y+ ++ G      +C    +E  L +++   +R  C D+  
Sbjct: 536 AYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEA--KELYLNMIN---NRRKC-DIYT 589

Query: 481 YRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMY 540
           Y  ++   C+   VD A ++F  +    +  D      +  A  + G  +   D+   + 
Sbjct: 590 YTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIGALLKGGRKEDAMDLFATIS 649

Query: 541 RRRLMITLKIYRSFSASYAKDN--EILDLFWSHVVDRG 576
              L+  ++ YR  + +  K+   E LD  +S + + G
Sbjct: 650 AYGLVPDVETYRLIAENLIKEGSLEELDELFSAMEENG 687



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 107/368 (29%), Positives = 180/368 (48%), Gaps = 4/368 (1%)

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
           P++   T +++ L K ++ D    V++ M+  GV  N H Y  LIH    +    +V ++
Sbjct: 200 PNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQM 259

Query: 223 LCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR 282
           L EM    ++ D   Y  L+   CK G   EA  + D + R+GI P +  Y  L+HG+  
Sbjct: 260 LQEMSTHGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYAT 319

Query: 283 EGRMREARRLFRDI---KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVV 339
           EG + E    F D+    G +P+H  +  + + Y +   ++EA+ + + M  + + PGVV
Sbjct: 320 EGALSEMHS-FLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVV 378

Query: 340 TYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRM 399
            Y +++  LCK GR+ DA    N+M  + + PD    ++L+   C +     A K+   +
Sbjct: 379 NYGALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEV 438

Query: 400 LEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNE 459
           L+ G+ L+   +  L+   C+   +  A+ L+  ML     P   SY+ LVDG+C     
Sbjct: 439 LDQGIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRI 498

Query: 460 EALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
           +   KLLD  VS GL  D   Y  L+  +CK  ++D A  LF  M   G+    V Y ++
Sbjct: 499 DEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTI 558

Query: 520 AYAYWRAG 527
            +  ++ G
Sbjct: 559 LHGLFQIG 566



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 111/377 (29%), Positives = 183/377 (48%), Gaps = 8/377 (2%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           S L+ +V+    PD   H+ + +   YA   M  + + +FD+MR   L P +     L++
Sbjct: 328 SFLDLMVRNGVSPD--HHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALID 385

Query: 174 SLAK-DRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVR 232
           +L K  R+ D V K + +M+  GV  +I +++ L++  C     +K EKL  E+  + +R
Sbjct: 386 ALCKLGRVDDAVLK-FNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIR 444

Query: 233 ADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRL 292
            +   +N L+   C++G   EA  + D M R  + PD+++YN+L+ G C  GR+ EA +L
Sbjct: 445 LNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKL 504

Query: 293 FRDIK---GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLC 349
             D+    G  P+  TY TL+ GYC+A  +++A  L   M  KG+ PGVVTYN+IL  L 
Sbjct: 505 L-DVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLF 563

Query: 350 KEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQF 409
           + GR  +A  L   M   +   D  T   ++N  C+      A K+   +    L LD F
Sbjct: 564 QIGRFCEAKELYLNMINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIF 623

Query: 410 TYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEF 469
           T   +I    K    + A +L   +   G  P   +Y  + +    + + E L +L    
Sbjct: 624 TINIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYRLIAENLIKEGSLEELDELFSAM 683

Query: 470 VSRGLCVDVSVYRALIR 486
              G   +  +  AL+R
Sbjct: 684 EENGTAPNSRMLNALVR 700



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 103/408 (25%), Positives = 186/408 (45%), Gaps = 43/408 (10%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           +FD +    + PH+    +LL+  A +     +      MV+ GV  + H++N++ +A  
Sbjct: 294 IFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHSFLDLMVRNGVSPDHHIFNIMFNAYA 353

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           K + +D+   +  +M  + +   +  Y  LI   CK G   +A+   ++M  EG++PDI 
Sbjct: 354 KKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKLGRVDDAVLKFNQMINEGVTPDIF 413

Query: 272 TYNSLIHGFC-----------------------------------REGRMREARRLFR-- 294
            ++SL++G C                                   REGR+ EA+RL    
Sbjct: 414 VFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILMCNLCREGRVMEAQRLIDLM 473

Query: 295 ---DIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
              D++   P+ ++Y TL+DG+C    ++EA +L +VM + G+ P   TYN++L   CK 
Sbjct: 474 LRVDVR---PDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKA 530

Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
            RI DA  L  EM  K + P  VT NT+++   +IG    A ++   M+      D +TY
Sbjct: 531 RRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINNRRKCDIYTY 590

Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
             +++G C+   +D A ++   +          + + ++        +E  + L     +
Sbjct: 591 TIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIGALLKGGRKEDAMDLFATISA 650

Query: 472 RGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
            GL  DV  YR +     K+  ++    LF+ M+ NG   +S +  +L
Sbjct: 651 YGLVPDVETYRLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNAL 698



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 95/360 (26%), Positives = 152/360 (42%), Gaps = 15/360 (4%)

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLI----HACCKSSD---VDKVEKLLCEMEFKDVRAD 234
           D   K++ +M+     A++  +N L+     A C S+    V    +++ E   K V   
Sbjct: 33  DDALKLFDEMLTYARPASVRTFNRLLTVVSRARCSSASELVVSLFNRMIRECSVK-VAPS 91

Query: 235 LFTYNTLIALYCKKGMHYEALAVQDRMEREGIS-PDIVTYNSLIHGFCREGRMREARR-L 292
             TY  LI  +C+ G      A    + + G S  + V +  L+ G C   R+ EA   L
Sbjct: 92  SCTYTILIGCFCRMGRLKHGFAAFGLILKTGWSLNNTVIFGQLLKGLCDAKRVDEATDIL 151

Query: 293 FRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGV---YPGVVTYNSILRK 347
            R +   G T N ++Y  L+ G C     EEAL L  +MA  G     P VVTY +++  
Sbjct: 152 LRRMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMMADDGDGSHTPNVVTYTTVIDG 211

Query: 348 LCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLD 407
           LCK   +  A  +   M +K + P+N T   LI+ Y   G     +++   M   GL  D
Sbjct: 212 LCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGLQPD 271

Query: 408 QFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLD 467
              Y  L+   CK      A+ +   ++  G  P    Y  L+ GY  +     +   LD
Sbjct: 272 CVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHSFLD 331

Query: 468 EFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
             V  G+  D  ++  +   + KK  +D A  +F+ M+   +    V Y +L  A  + G
Sbjct: 332 LMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKLG 391


>gi|414868297|tpg|DAA46854.1| TPA: hypothetical protein ZEAMMB73_384018 [Zea mays]
          Length = 504

 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 99/293 (33%), Positives = 162/293 (55%), Gaps = 3/293 (1%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
            +  MR H + P + +C V ++   + R  ++    +++M +  V  N++  N+++ A C
Sbjct: 163 TYRAMRAHGMFPTVESCNVFISGALRLRRPEIAISFFREMRRCRVSPNVYTVNMVMRAKC 222

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYC-KKGMHYEALAVQDRMEREGISPDI 270
               V    +LL EM          ++NTLIA YC   G     L +++RMEREG+ P+ 
Sbjct: 223 ALGRVVDAAQLLDEMPCWGFSRTAASFNTLIAAYCHDSGGMETVLRLKERMEREGLVPNE 282

Query: 271 VTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
           VTYN+++HG C+EGRM +ARR+  +  +KG TPN +T+ TLI  Y    D E A+++ E 
Sbjct: 283 VTYNTIVHGLCKEGRMHQARRIVNEMRVKGVTPNTITFNTLIHSYVTLGDNEVAMKMHEE 342

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M   G+   +VTYN+++  LC EG+   A++L+ E+   K+ P+  T + LI   CK  +
Sbjct: 343 MMKAGLSADLVTYNALILGLCNEGKTWKASQLVQELCAAKLEPNASTFSALIIGQCKKQN 402

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
              A+ + N M +AG   + +TY  LI  F K K+ + A ++L  ML    +P
Sbjct: 403 PERALDLLNAMKKAGFQPNYYTYSILISTFSKNKDFEGAIDVLKDMLMRCIAP 455



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 88/247 (35%), Positives = 134/247 (54%), Gaps = 3/247 (1%)

Query: 254 ALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLID 311
           A++    M R  +SP++ T N ++   C  GR+ +A +L  ++   G +    ++ TLI 
Sbjct: 195 AISFFREMRRCRVSPNVYTVNMVMRAKCALGRVVDAAQLLDEMPCWGFSRTAASFNTLIA 254

Query: 312 GYCR-ANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIA 370
            YC  +  +E  LRL+E M  +G+ P  VTYN+I+  LCKEGR+  A R++NEM  K + 
Sbjct: 255 AYCHDSGGMETVLRLKERMEREGLVPNEVTYNTIVHGLCKEGRMHQARRIVNEMRVKGVT 314

Query: 371 PDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL 430
           P+ +T NTLI++Y  +GD   AMK+   M++AGL  D  TY ALI G C   +   A +L
Sbjct: 315 PNTITFNTLIHSYVTLGDNEVAMKMHEEMMKAGLSADLVTYNALILGLCNEGKTWKASQL 374

Query: 431 LFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCK 490
           +  +  A   P+  ++S L+ G C K N E  L LL+     G   +   Y  LI  F K
Sbjct: 375 VQELCAAKLEPNASTFSALIIGQCKKQNPERALDLLNAMKKAGFQPNYYTYSILISTFSK 434

Query: 491 KEKVDYA 497
            +  + A
Sbjct: 435 NKDFEGA 441



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/285 (25%), Positives = 130/285 (45%), Gaps = 3/285 (1%)

Query: 261 MEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKG--ATPNHVTYTTLIDGYCRAND 318
           M   G+ P + + N  I G  R  R   A   FR+++    +PN  T   ++   C    
Sbjct: 167 MRAHGMFPTVESCNVFISGALRLRRPEIAISFFREMRRCRVSPNVYTVNMVMRAKCALGR 226

Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKE-GRIRDANRLLNEMNEKKIAPDNVTCN 377
           + +A +L + M   G      ++N+++   C + G +    RL   M  + + P+ VT N
Sbjct: 227 VVDAAQLLDEMPCWGFSRTAASFNTLIAAYCHDSGGMETVLRLKERMEREGLVPNEVTYN 286

Query: 378 TLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA 437
           T+++  CK G    A ++ N M   G+  +  T+  LIH +    + ++A ++   M+ A
Sbjct: 287 TIVHGLCKEGRMHQARRIVNEMRVKGVTPNTITFNTLIHSYVTLGDNEVAMKMHEEMMKA 346

Query: 438 GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYA 497
           G S    +Y+ L+ G CN+       +L+ E  +  L  + S + ALI   CKK+  + A
Sbjct: 347 GLSADLVTYNALILGLCNEGKTWKASQLVQELCAAKLEPNASTFSALIIGQCKKQNPERA 406

Query: 498 QRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRR 542
             L N M+  G   +   Y+ L   + +  + +   D+L DM  R
Sbjct: 407 LDLLNAMKKAGFQPNYYTYSILISTFSKNKDFEGAIDVLKDMLMR 451



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/225 (24%), Positives = 101/225 (44%), Gaps = 2/225 (0%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           L++ ++M    L+P+      +++ L K+       ++  +M   GV  N   +N LIH+
Sbjct: 267 LRLKERMEREGLVPNEVTYNTIVHGLCKEGRMHQARRIVNEMRVKGVTPNTITFNTLIHS 326

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
                D +   K+  EM    + ADL TYN LI   C +G  ++A  +   +    + P+
Sbjct: 327 YVTLGDNEVAMKMHEEMMKAGLSADLVTYNALILGLCNEGKTWKASQLVQELCAAKLEPN 386

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLRE 327
             T+++LI G C++     A  L   +K  G  PN+ TY+ LI  + +  D E A+ + +
Sbjct: 387 ASTFSALIIGQCKKQNPERALDLLNAMKKAGFQPNYYTYSILISTFSKNKDFEGAIDVLK 446

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPD 372
            M  + + P     +     L K  ++  A  L +  N  +   D
Sbjct: 447 DMLMRCIAPDKALLHEFFEGLSKAKKLHLAADLRSVANGTRFISD 491


>gi|15229026|ref|NP_190450.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75183419|sp|Q9M302.1|PP270_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g48810
 gi|7576219|emb|CAB87909.1| putative protein [Arabidopsis thaliana]
 gi|332644937|gb|AEE78458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 659

 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 115/435 (26%), Positives = 212/435 (48%), Gaps = 25/435 (5%)

Query: 74  YKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVL 133
           +KH+  +   MI  L  +    S Q +L+++ L+ F  +  +  +++ +           
Sbjct: 72  FKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISV----------- 120

Query: 134 SWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQ 193
                 Y  + + +  +++F +++     P +     +L++L  +    M++ VY+ M +
Sbjct: 121 ------YRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKR 174

Query: 194 LGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYE 253
            G   N+  YNVL+ A CK++ VD  +KLL EM  K    D  +Y T+I+  C+ G+  E
Sbjct: 175 DGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKE 234

Query: 254 ALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLID 311
              + +R E     P +  YN+LI+G C+E   + A  L R++  KG +PN ++Y+TLI+
Sbjct: 235 GRELAERFE-----PVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLIN 289

Query: 312 GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEK-KIA 370
             C +  +E A      M  +G +P + T +S+++     G   DA  L N+M     + 
Sbjct: 290 VLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQ 349

Query: 371 PDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL 430
           P+ V  NTL+  +C  G+   A+ V + M E G   +  TY +LI+GF K   +D A  +
Sbjct: 350 PNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYI 409

Query: 431 LFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCK 490
              ML +G  P+   Y+ +V+  C  +  +    L++          V  + A I+  C 
Sbjct: 410 WNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCD 469

Query: 491 KEKVDYAQRLFNLMQ 505
             ++D+A+++F  M+
Sbjct: 470 AGRLDWAEKVFRQME 484



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 104/402 (25%), Positives = 186/402 (46%), Gaps = 19/402 (4%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           +   ++  +M    + P++ + + L+N L      ++ +    +M++ G   NI+  + L
Sbjct: 263 KGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSL 322

Query: 207 IHAC-CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
           +  C  + +  D ++     +    ++ ++  YNTL+  +C  G   +A++V   ME  G
Sbjct: 323 VKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIG 382

Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEAL 323
            SP+I TY SLI+GF + G +  A  ++  +   G  PN V YT +++  CR +  +EA 
Sbjct: 383 CSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAE 442

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDN-VTCNTLINA 382
            L E+M+ +   P V T+N+ ++ LC  GR+  A ++  +M ++   P N VT N L++ 
Sbjct: 443 SLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDG 502

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
             K      A  +   +   G+     TY  L+HG C A    IA +L+  M+  G SP 
Sbjct: 503 LAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPD 562

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVS---RGLCVDVSVYRALIRRFCKKEKVDYAQR 499
             + + ++  YC +   E   ++LD  VS   R    DV  Y  +I   C+    +    
Sbjct: 563 EITMNMIILAYCKQGKAERAAQMLD-LVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVI 621

Query: 500 LFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
           L   M   GI+     ++ L   +           ILDD+ R
Sbjct: 622 LLERMISAGIVPSIATWSVLINCF-----------ILDDIVR 652



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 91/325 (28%), Positives = 158/325 (48%), Gaps = 13/325 (4%)

Query: 261 MEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRAND 318
           M+R+G  P++ TYN L+   C+  ++  A++L  ++  KG  P+ V+YTT+I   C    
Sbjct: 172 MKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGL 231

Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT 378
           ++E   L E        P V  YN+++  LCKE   + A  L+ EM EK I+P+ ++ +T
Sbjct: 232 VKEGRELAERFE-----PVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYST 286

Query: 379 LINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHG-FCKAKEMDIAKELLFGMLDA 437
           LIN  C  G    A     +ML+ G   + +T  +L+ G F +    D A +L   M+  
Sbjct: 287 LINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFD-ALDLWNQMIRG 345

Query: 438 -GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDY 496
            G  P+  +Y+ LV G+C+  N    + +       G   ++  Y +LI  F K+  +D 
Sbjct: 346 FGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDG 405

Query: 497 AQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSA 556
           A  ++N M  +G   + V+YT++  A  R  + K    +++ M +     ++  + +F  
Sbjct: 406 AVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIK 465

Query: 557 SYAKDNEILDLFWSHVVDRGLMSKH 581
               D   LD  W+  V R +  +H
Sbjct: 466 GLC-DAGRLD--WAEKVFRQMEQQH 487



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 94/332 (28%), Positives = 155/332 (46%), Gaps = 8/332 (2%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQM-RVHNLMPHLHACTVLLNSLAKDRLTDMVWKV 187
           N + LS LV        T D L +++QM R   L P++ A   L+              V
Sbjct: 315 NIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSV 374

Query: 188 YKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCK 247
           +  M ++G   NI  Y  LI+   K   +D    +  +M       ++  Y  ++   C+
Sbjct: 375 FSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCR 434

Query: 248 KGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKG---ATPNHV 304
                EA ++ + M +E  +P + T+N+ I G C  GR+  A ++FR ++      PN V
Sbjct: 435 HSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIV 494

Query: 305 TYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM 364
           TY  L+DG  +AN +EEA  L   +  +GV     TYN++L   C  G    A +L+ +M
Sbjct: 495 TYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKM 554

Query: 365 NEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAG---LMLDQFTYKALIHGFCKA 421
                +PD +T N +I AYCK G    A ++ + ++  G      D  +Y  +I G C++
Sbjct: 555 MVDGKSPDEITMNMIILAYCKQGKAERAAQMLD-LVSCGRRKWRPDVISYTNVIWGLCRS 613

Query: 422 KEMDIAKELLFGMLDAGFSPSYCSYSWLVDGY 453
              +    LL  M+ AG  PS  ++S L++ +
Sbjct: 614 NCREDGVILLERMISAGIVPSIATWSVLINCF 645


>gi|242089061|ref|XP_002440363.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
 gi|241945648|gb|EES18793.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
          Length = 715

 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 109/397 (27%), Positives = 197/397 (49%), Gaps = 4/397 (1%)

Query: 134 SWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLA-KDRLTDMVWKVYKKMV 192
           S L+ +Y  +    +   +FD M      P  +    LL+  A K  L DM   +   M+
Sbjct: 229 SLLIDYYCKIGRCTEARNIFDSMVRRGQNPDAYTYRTLLHGYATKGALVDM-HDLLALMI 287

Query: 193 QLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHY 252
           Q G+    H++N+LI A  K+  +DK      EM  K    ++ TY T+I + CK G   
Sbjct: 288 QDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVE 347

Query: 253 EALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLI 310
           +A++   +M  EG+SPDI+T+ SLIHG C  G  ++  +L  ++  +G  PN +   T++
Sbjct: 348 DAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIM 407

Query: 311 DGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIA 370
           D  C+   + EA    + +   GV P VV+Y  ++   C +G++ ++ +LL  M    + 
Sbjct: 408 DSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLR 467

Query: 371 PDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL 430
           PDNVT + L+N YCK G    A+ +   M    +  +  TY  ++HG   A  +  A+E 
Sbjct: 468 PDNVTYSALLNGYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREF 527

Query: 431 LFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCK 490
              ++D+G      +Y+ ++ G C  +  +  L++     S+   ++V  +  +I    K
Sbjct: 528 YMKIVDSGIQLGINTYNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLK 587

Query: 491 KEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
             ++  A+ LF+ +  +G++ D++IY  +  ++   G
Sbjct: 588 VGRIGDAKSLFSAILPSGLVPDAIIYGLMIQSHIEEG 624



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 114/388 (29%), Positives = 189/388 (48%), Gaps = 20/388 (5%)

Query: 159 HNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDK 218
           +N  P++ +  +++N L K+   D  + ++ +M+  G   NI  YN +I   CK+  +DK
Sbjct: 133 YNCPPNVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDK 192

Query: 219 VE----------------KLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRME 262
            E                +LL +M    ++ D+ TY+ LI  YCK G   EA  + D M 
Sbjct: 193 AEAVLQQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMV 252

Query: 263 REGISPDIVTYNSLIHGFCREGRMREARRLFR-DIKGATP--NHVTYTTLIDGYCRANDL 319
           R G +PD  TY +L+HG+  +G + +   L    I+   P  +HV +  LI  Y +   L
Sbjct: 253 RRGQNPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHV-FNILIRAYAKNETL 311

Query: 320 EEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTL 379
           ++A+     M  KG  P VVTY +++  LCK GR+ DA    ++M  + ++PD +T  +L
Sbjct: 312 DKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSL 371

Query: 380 INAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGF 439
           I+  C IG+     K+   M+  G+  +      ++   CK   +  A +    ++  G 
Sbjct: 372 IHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGV 431

Query: 440 SPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQR 499
            P   SY+ L+DGYC     +  +KLL   VS GL  D   Y AL+  +CK  +VD A  
Sbjct: 432 KPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALA 491

Query: 500 LFNLMQGNGILGDSVIYTSLAYAYWRAG 527
           L+  M    +  +++ Y  + +  + AG
Sbjct: 492 LYREMFSKDVKPNAITYNIILHGLFHAG 519



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 92/358 (25%), Positives = 175/358 (48%), Gaps = 2/358 (0%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           ++ +++  +M    L P +   ++L++   K         ++  MV+ G   + + Y  L
Sbjct: 207 EEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQNPDAYTYRTL 266

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           +H       +  +  LL  M    +  +   +N LI  Y K     +A+     M ++G 
Sbjct: 267 LHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEMRQKGF 326

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
           SP++VTY ++I   C+ GR+ +A   F  +  +G +P+ +T+T+LI G C   + ++  +
Sbjct: 327 SPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKKVEK 386

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           L   M  +G++P  +  N+I+  LCKEGR+ +A+   +++    + PD V+   LI+ YC
Sbjct: 387 LSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILIDGYC 446

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
             G    ++K+  RM+  GL  D  TY AL++G+CK   +D A  L   M      P+  
Sbjct: 447 LDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFSKDVKPNAI 506

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
           +Y+ ++ G  +     A  +   + V  G+ + ++ Y  ++   C+   VD A R+F 
Sbjct: 507 TYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGLCENSFVDEALRMFQ 564



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 116/406 (28%), Positives = 190/406 (46%), Gaps = 20/406 (4%)

Query: 107 RDFLSTPSVLNALVKIHD-----DPDG---NSHVLSWLVIFYANLKMTQDGLQVFDQMRV 158
           R  L   +   ALV +HD       DG     HV + L+  YA  +     +  F +MR 
Sbjct: 264 RTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEMRQ 323

Query: 159 HNLMPHLHACTVLLNSLAK-DRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVD 217
               P++   T +++ L K  R+ D V   + +MV  G+  +I  +  LIH  C   +  
Sbjct: 324 KGFSPNVVTYTTVIDILCKAGRVEDAVSH-FSQMVSEGLSPDIITFTSLIHGLCTIGEWK 382

Query: 218 KVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLI 277
           KVEKL  EM  + +  +    NT++   CK+G   EA    D++   G+ PD+V+Y  LI
Sbjct: 383 KVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILI 442

Query: 278 HGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVY 335
            G+C +G+M E+ +L   +   G  P++VTY+ L++GYC+   +++AL L   M +K V 
Sbjct: 443 DGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFSKDVK 502

Query: 336 PGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKV 395
           P  +TYN IL  L   GR+  A     ++ +  I     T N ++   C+      A+++
Sbjct: 503 PNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGLCENSFVDEALRM 562

Query: 396 KNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCN 455
              +      L+  T+  +I G  K   +  AK L   +L +G  P    Y  ++  +  
Sbjct: 563 FQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAILPSGLVPDAIIYGLMIQSHI- 621

Query: 456 KNNEEALLKLLDE-FVS---RGLCVDVSVYRALIRRFCKKEKVDYA 497
              EE LL+  DE F+S    G   +     A++R+  +K  V  A
Sbjct: 622 ---EEGLLEESDELFLSMEKNGCTANSRTLNAIVRKLLEKGDVRRA 664



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/236 (24%), Positives = 109/236 (46%), Gaps = 2/236 (0%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           + +++  +M    L P     + LLN   K+   D    +Y++M    V  N   YN+++
Sbjct: 453 ESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFSKDVKPNAITYNIIL 512

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           H    +  V    +   ++    ++  + TYN ++   C+     EAL +   +  +   
Sbjct: 513 HGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGLCENSFVDEALRMFQGLRSKEFQ 572

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
            ++ T+N +I G  + GR+ +A+ LF  I   G  P+ + Y  +I  +     LEE+  L
Sbjct: 573 LEVRTFNIMIVGLLKVGRIGDAKSLFSAILPSGLVPDAIIYGLMIQSHIEEGLLEESDEL 632

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
              M   G      T N+I+RKL ++G +R A   L +++EK+ + +  T   LI+
Sbjct: 633 FLSMEKNGCTANSRTLNAIVRKLLEKGDVRRAGTYLTKIDEKEYSVEASTAVLLIS 688



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 75/285 (26%), Positives = 120/285 (42%), Gaps = 39/285 (13%)

Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR--------LLNEMNE---K 367
           LE+AL L + +  +     V  +N +L  +   G    + R        L N M +    
Sbjct: 30  LEDALNLFDELLPRARSASVHAFNRVL-TVVAHGDSSSSQRHGAALAVSLFNTMAQVGVN 88

Query: 368 KIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAG--LMLDQ--------FTYKALIHG 417
           K+A D  T   LI  +C +G    A++ ++R   A   +M D          +Y  +I+G
Sbjct: 89  KLATDACTFGILIRCFCNVGLLDFALEEESRGSRAAVHMMADDGYNCPPNVLSYNMVING 148

Query: 418 FCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYC----------------NKNNEEA 461
             K  E+D A  L   ML  GF P+  +Y+ ++DG C                +K   E 
Sbjct: 149 LFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAVLQQMFDKGQLEE 208

Query: 462 LLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAY 521
            ++LL +    GL  DV  Y  LI  +CK  +   A+ +F+ M   G   D+  Y +L +
Sbjct: 209 AVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQNPDAYTYRTLLH 268

Query: 522 AYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
            Y   G      D+L  M +  + +   ++     +YAK NE LD
Sbjct: 269 GYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAK-NETLD 312


>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
          Length = 715

 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 123/493 (24%), Positives = 231/493 (46%), Gaps = 40/493 (8%)

Query: 132 VLSWLVIFYANLKMTQDG--LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYK 189
           V+++ V+  A  K T  G  ++V D+MR     P++    V++N + ++   D   +   
Sbjct: 211 VVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLN 270

Query: 190 KMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKG 249
           ++   G   +   Y  ++   C +   + VE+L  EM  K+   +  T++ L+  +C+ G
Sbjct: 271 RLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGG 330

Query: 250 MHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYT 307
           M   A+ V ++M   G + +    N +I+  C++GR+ +A +   ++   G +P+ ++YT
Sbjct: 331 MVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYT 390

Query: 308 TLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEK 367
           T++ G CRA   E+A  L + M  K   P  VT+N+ +  LC++G I  A  L+ +M+E 
Sbjct: 391 TVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEH 450

Query: 368 KIAPDNVTCNTLINAYCKIGDTASAM--------------------------------KV 395
               + VT N L+N +C  G   SA+                                ++
Sbjct: 451 GCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKPNTITYTTLLTGLCNAERLDAAAEL 510

Query: 396 KNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCN 455
              ML+     +  T+  L+  FC+   MD A EL+  M++ G +P+  +Y+ L+DG   
Sbjct: 511 LAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITK 570

Query: 456 KNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVI 515
             N E  L+LL   VS G+  D+  Y ++I    ++++V+ A ++F+++Q  G+   +VI
Sbjct: 571 DCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVI 630

Query: 516 YTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDN---EILDLFWSHV 572
           Y  +  A  +        D    M     M     Y +     A ++   E  DL    +
Sbjct: 631 YNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLL-REL 689

Query: 573 VDRGLMSKHIFKE 585
             RG+++K++ +E
Sbjct: 690 CSRGVLNKNLLEE 702



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 120/457 (26%), Positives = 204/457 (44%), Gaps = 46/457 (10%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           ++ D+       P ++ CT L+ +L +   T    +V +   + G   ++  YN L+   
Sbjct: 95  RLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGY 154

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALA-------------- 256
           C+   +D   +L+  M    V  D +TY  +I   C +G   EAL+              
Sbjct: 155 CRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSV 211

Query: 257 ---------------------VQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD 295
                                V D M  +G +P+IVTYN +I+G CREGR+ +AR     
Sbjct: 212 VTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNR 271

Query: 296 IK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGR 353
           +   G  P+ V+YTT++ G C A   E+   L   M  K   P  VT++ ++R  C+ G 
Sbjct: 272 LSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGM 331

Query: 354 IRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKA 413
           +  A ++L +M+    A +   CN +IN  CK G    A +  N M   G   D  +Y  
Sbjct: 332 VERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTT 391

Query: 414 LIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
           ++ G C+A+  + AKELL  M+     P+  +++  +   C K   E    L+++    G
Sbjct: 392 VLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHG 451

Query: 474 LCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACS 533
             V++  Y AL+  FC + +VD A  LF  M       +++ YT+L      A    A +
Sbjct: 452 CEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK---PNTITYTTLLTGLCNAERLDAAA 508

Query: 534 DILDDMYRRRL---MITLKIYRSFSASYAKDNEILDL 567
           ++L +M ++     ++T  +  SF       +E ++L
Sbjct: 509 ELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIEL 545



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 101/387 (26%), Positives = 187/387 (48%), Gaps = 1/387 (0%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N      LV F+    M +  +QV +QM  H    +   C +++N++ K    D  ++  
Sbjct: 315 NEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFL 374

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
             M   G   +   Y  ++   C++   +  ++LL EM  K+   +  T+NT I + C+K
Sbjct: 375 NNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQK 434

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYTT 308
           G+  +A  + ++M   G   +IVTYN+L++GFC +GR+  A  LF  +    PN +TYTT
Sbjct: 435 GLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP-CKPNTITYTT 493

Query: 309 LIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKK 368
           L+ G C A  L+ A  L   M  K   P VVT+N ++   C++G + +A  L+ +M E  
Sbjct: 494 LLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHG 553

Query: 369 IAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAK 428
             P+ +T NTL++   K  ++  A+++ + ++  G+  D  TY ++I    +   ++ A 
Sbjct: 554 CTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAI 613

Query: 429 ELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRF 488
           ++   + D G  P    Y+ ++   C + N +  +      VS G   +   Y  LI   
Sbjct: 614 KMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGL 673

Query: 489 CKKEKVDYAQRLFNLMQGNGILGDSVI 515
             ++ +   + L   +   G+L  +++
Sbjct: 674 ANEDFLKETRDLLRELCSRGVLNKNLL 700



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 116/462 (25%), Positives = 200/462 (43%), Gaps = 46/462 (9%)

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
           P  +  T ++  L           +   M+  G   ++  Y VL+ A CKS+   +  ++
Sbjct: 174 PDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEV 233

Query: 223 LCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR 282
           L EM  K    ++ TYN +I   C++G   +A    +R+   G  PD V+Y +++ G C 
Sbjct: 234 LDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCA 293

Query: 283 EGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAK-------- 332
             R  +   LF ++  K   PN VT+  L+  +CR   +E A+++ E M+          
Sbjct: 294 AKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTL 353

Query: 333 ---------------------------GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMN 365
                                      G  P  ++Y ++L+ LC+  R  DA  LL EM 
Sbjct: 354 CNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMV 413

Query: 366 EKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMD 425
            K   P+ VT NT I   C+ G    A  +  +M E G  ++  TY AL++GFC    +D
Sbjct: 414 RKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVD 473

Query: 426 IAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
            A EL + M      P+  +Y+ L+ G CN    +A  +LL E + +    +V  +  L+
Sbjct: 474 SALELFYSM---PCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLV 530

Query: 486 RRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
             FC+K  +D A  L   M  +G   + + Y +L     +    +   ++L  +    + 
Sbjct: 531 SFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVS 590

Query: 546 ITLKIYRSFSASYAKDN---EILDLFWSHVV-DRGLMSKHIF 583
             +  Y S     ++++   E + +F  H+V D G+  K + 
Sbjct: 591 PDIVTYSSIIGVLSREDRVEEAIKMF--HIVQDLGMRPKAVI 630



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 62/224 (27%), Positives = 102/224 (45%), Gaps = 3/224 (1%)

Query: 322 ALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
           A RL +   ++G  P V     ++R LC+ GR  DA R+L        A D    NTL+ 
Sbjct: 93  AARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVA 152

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
            YC+ G   +A ++   M  A    D +TY  +I G C    +  A  LL  ML  G  P
Sbjct: 153 GYCRYGQLDAARRLIASMPVAP---DAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQP 209

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
           S  +Y+ L++  C        +++LDE  ++G   ++  Y  +I   C++ +VD A+   
Sbjct: 210 SVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFL 269

Query: 502 NLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
           N +   G   D+V YT++      A   +   ++  +M  +  M
Sbjct: 270 NRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCM 313


>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 839

 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 117/417 (28%), Positives = 194/417 (46%), Gaps = 6/417 (1%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           + +++  +M+     P++   T L++ L++D   ++   VY KM+  G+V     Y+ LI
Sbjct: 325 EAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALI 384

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           +        +    +   M   D   +  TYN +I  +C  G   +A A+ D+M + G S
Sbjct: 385 NQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPS 444

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDIKG--ATPNHVTYTTLIDGYCRANDLEEALRL 325
           P+++TYN +IH + ++G M  A RL   +KG     +  TY  LI G+ R   LE A  L
Sbjct: 445 PNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSL 504

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
              M   G+ P VVTYN+I+       ++ DA  L  +M E    P + T N +I+ + K
Sbjct: 505 FNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSK 564

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
               + A     +M++ GL+ +  TY + I G CK     +A ++   M    + P+ C+
Sbjct: 565 TNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCT 624

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           YS L+DG C +   E   +LLD+    G   +V  Y  L+R  C K +   A +L   M+
Sbjct: 625 YSSLIDGLCQEGQAEDAERLLDD----GCEPNVDTYTTLVRGLCGKGRCYEADQLVESMK 680

Query: 506 GNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDN 562
             G+     IY +L     +  E ++   I D M        L  Y++   +  K N
Sbjct: 681 KKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKAN 737



 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 113/405 (27%), Positives = 191/405 (47%), Gaps = 6/405 (1%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           +  L +F+ M  H+ +P+     V++              ++ +M++ G   N+  YN++
Sbjct: 394 ETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNII 453

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           IH   K   ++   +LL  M+   ++ D +TY  LI+ + + G    A ++ + M   GI
Sbjct: 454 IHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGI 513

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
           SP++VTYN++I+G+    ++ +A  LF  +   G  P+  TY  +I G+ + N + EA  
Sbjct: 514 SPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAEN 573

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
               M  +G+ P V+TY S +  LCK GR   A ++ +EM ++   P+  T ++LI+  C
Sbjct: 574 FCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLC 633

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           + G    A     R+L+ G   +  TY  L+ G C       A +L+  M   G  PS  
Sbjct: 634 QEGQAEDA----ERLLDDGCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEE 689

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
            Y  L+ G C     E+ LK+ D  V+ G    +S Y+ALI   CK      AQ +F  M
Sbjct: 690 IYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQCMFQTM 749

Query: 505 QGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLK 549
                  D V++T L     + GE     ++L  M  R   +  +
Sbjct: 750 LKKHWNSDEVVWTVLLDGLLKEGETDLSLELLHVMESRNCTLNFQ 794



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 135/545 (24%), Positives = 232/545 (42%), Gaps = 42/545 (7%)

Query: 63  FFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQN--MLEKIALRDFLSTPSVLNALV 120
           FF W  S    +KH +    +M++ L +++ F  A N  +L   + R+      V+  L 
Sbjct: 97  FFHWV-SRTHFFKHDMSCFVSMLNRLVRDRLFVPADNVRILMIKSCRNEGEVKRVIQVLS 155

Query: 121 KIHDDPDGNSHVLSWLVIFYANLKMTQDGL--QVFDQMRVHNLMP--------------- 163
           +I+   D    + S+  +     K   DGL   V+ +M    + P               
Sbjct: 156 EINTTYDFGYTLYSFSTLLIQLGKFDMDGLGRDVYIEMLNSGIRPNLFTFNAMIKILCNK 215

Query: 164 --------------HLHAC------TVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLY 203
                         H  AC      T L+    K+   D+ ++++ +MV+ G   N   Y
Sbjct: 216 GKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTY 275

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER 263
           + LI+  C    +++   +L EM  K +   +  Y   I   C  G   EA+ +  +M++
Sbjct: 276 SALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKK 335

Query: 264 EGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEE 321
            G  P++ TY +LI G  R+G+   A  ++  +   G  P  VTY+ LI+        E 
Sbjct: 336 RGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFET 395

Query: 322 ALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
           AL + E M +    P   TYN I++  C  G I+ A  + ++M +   +P+ +T N +I+
Sbjct: 396 ALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIH 455

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
            Y K G   +AM++   M   GL LD +TY  LI GF +  +++ A  L   M++ G SP
Sbjct: 456 IYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISP 515

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
           +  +Y+ +++GY      +  L L  + V  G       Y  +I  F K  ++  A+   
Sbjct: 516 NVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFC 575

Query: 502 NLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKD 561
             M   G+L + + YTS      + G       I  +M +R     L  Y S      ++
Sbjct: 576 GKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQE 635

Query: 562 NEILD 566
            +  D
Sbjct: 636 GQAED 640



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 124/463 (26%), Positives = 197/463 (42%), Gaps = 49/463 (10%)

Query: 165 LHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLC 224
           L++ + LL  L K  +  +   VY +M+  G+  N+  +N +I   C    V + E ++ 
Sbjct: 167 LYSFSTLLIQLGKFDMDGLGRDVYIEMLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMG 226

Query: 225 EMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREG 284
            +       D FTY +LI  +CK G    A  + DRM ++G  P+ VTY++LI+G C EG
Sbjct: 227 HIFHYGACPDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEG 286

Query: 285 RMREARRLFRDI-------------------------------------KGATPNHVTYT 307
           R+ EA  +  ++                                     +G  PN  TYT
Sbjct: 287 RLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYT 346

Query: 308 TLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEK 367
            LI G  R    E A+ +   M A G+ P  VTY++++ +L  EGR   A  +   M   
Sbjct: 347 ALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSH 406

Query: 368 KIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIA 427
              P+  T N +I  +C IG    A  + ++ML+AG   +  TY  +IH + K   M+ A
Sbjct: 407 DSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNA 466

Query: 428 KELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRR 487
             LL  M   G      +Y+ L+ G+      E    L +E V  G+  +V  Y A+I  
Sbjct: 467 MRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIING 526

Query: 488 FCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMIT 547
           +    KVD A  LF  M  +G +  S  Y  +   + +        +    M ++ L+  
Sbjct: 527 YLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPN 586

Query: 548 LKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKEMQLRN 590
           +  Y SF     K+             R  ++  IF EM+ R+
Sbjct: 587 VITYTSFIDGLCKNG------------RTSLAFKIFHEMKKRD 617



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 103/391 (26%), Positives = 187/391 (47%), Gaps = 2/391 (0%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
            ++FD+M      P+    + L+N L  +   +    + ++M+  G+   +H Y + I +
Sbjct: 257 FEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVS 316

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
            C +    +  KLL +M+ +    ++ TY  LI+   + G    A+ V  +M  +G+ P 
Sbjct: 317 LCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPT 376

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLRE 327
            VTY++LI+    EGR   A  +F  +    + PN  TY  +I G+C    +++A  + +
Sbjct: 377 AVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFD 436

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
            M   G  P V+TYN I+    K+G + +A RLL  M    +  D  T   LI+ + + G
Sbjct: 437 QMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGG 496

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
               A  + N M+E G+  +  TY A+I+G+    ++D A  L + M+++G  PS  +Y+
Sbjct: 497 KLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYN 556

Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGN 507
            ++ G+   N          + V +GL  +V  Y + I   CK  +   A ++F+ M+  
Sbjct: 557 MMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKR 616

Query: 508 GILGDSVIYTSLAYAYWRAGEPKACSDILDD 538
               +   Y+SL     + G+ +    +LDD
Sbjct: 617 DYFPNLCTYSSLIDGLCQEGQAEDAERLLDD 647



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 111/445 (24%), Positives = 199/445 (44%), Gaps = 6/445 (1%)

Query: 122 IHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLT 181
           + D  D NS   S L+    +    ++ + + ++M    + P +HA T+ + SL     +
Sbjct: 264 VKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRS 323

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
               K+  KM + G   N+  Y  LI    +    +    +  +M    +     TY+ L
Sbjct: 324 CEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSAL 383

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGA 299
           I     +G    AL + + M      P+  TYN +I GFC  G +++A  +F  +   G 
Sbjct: 384 INQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGP 443

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
           +PN +TY  +I  Y +   +  A+RL E+M   G+     TY +++    + G++  A  
Sbjct: 444 SPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFS 503

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
           L NEM E  I+P+ VT N +IN Y  +     A+ +  +M+E+G +    TY  +I GF 
Sbjct: 504 LFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFS 563

Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
           K   +  A+     M+  G  P+  +Y+  +DG C         K+  E   R    ++ 
Sbjct: 564 KTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLC 623

Query: 480 VYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
            Y +LI   C++ + + A+RL +    +G   +   YT+L       G       +++ M
Sbjct: 624 TYSSLIDGLCQEGQAEDAERLLD----DGCEPNVDTYTTLVRGLCGKGRCYEADQLVESM 679

Query: 540 YRRRLMITLKIYRSFSASYAKDNEI 564
            ++ L  + +IYR+      K+ E+
Sbjct: 680 KKKGLQPSEEIYRALLVGQCKNLEV 704



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 106/429 (24%), Positives = 190/429 (44%), Gaps = 24/429 (5%)

Query: 80  SHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVK-------------IHDD- 125
           ++  +I+ L     F++A  + E +   D L      N ++K             I D  
Sbjct: 379 TYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQM 438

Query: 126 ----PDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLT 181
               P  N    + ++  Y       + +++ + M+ + L         L++  ++    
Sbjct: 439 LKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKL 498

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
           +  + ++ +MV+ G+  N+  YN +I+     + VD    L  +M          TYN +
Sbjct: 499 EHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMM 558

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGAT- 300
           I+ + K     EA     +M ++G+ P+++TY S I G C+ GR   A ++F ++K    
Sbjct: 559 ISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDY 618

Query: 301 -PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
            PN  TY++LIDG C+    E+A RL +     G  P V TY +++R LC +GR  +A++
Sbjct: 619 FPNLCTYSSLIDGLCQEGQAEDAERLLD----DGCEPNVDTYTTLVRGLCGKGRCYEADQ 674

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
           L+  M +K + P       L+   CK  +  SA+K+ + M+  G       YKALI   C
Sbjct: 675 LVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALC 734

Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
           KA     A+ +   ML   ++     ++ L+DG   +   +  L+LL    SR   ++  
Sbjct: 735 KANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGETDLSLELLHVMESRNCTLNFQ 794

Query: 480 VYRALIRRF 488
               L R  
Sbjct: 795 TRVMLAREL 803


>gi|242073534|ref|XP_002446703.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
 gi|241937886|gb|EES11031.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
          Length = 802

 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 116/412 (28%), Positives = 201/412 (48%), Gaps = 22/412 (5%)

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
           DM +++ K M+  G V +   Y+ +I   C++  V+K   L  EM+   V  D++TY  L
Sbjct: 270 DMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTIL 329

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGA 299
           I  +CK G+  +A +  D M   G S ++VTY +L+H + +  ++ +A  +F  +   G 
Sbjct: 330 IDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGC 389

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLR----------------EVMAAKGVYPGVVTYNS 343
            PN +TY+ L+DG C+A ++++A  +                 E      + P VVTY +
Sbjct: 390 PPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGA 449

Query: 344 ILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAG 403
           ++  LCK  ++ DA  LL+ M      P+++  + LI+ +CK+G   +A +V  RM + G
Sbjct: 450 LIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCG 509

Query: 404 LMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALL 463
            +    TY +LI    K + +D+A ++L  M+++  +P+  +Y+ ++DG C     +  L
Sbjct: 510 YLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKAL 569

Query: 464 KLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAY 523
           KLL     +G   +V  Y ALI    K  KVD + +LF  M   G   + V Y  L    
Sbjct: 570 KLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHC 629

Query: 524 WRAGEPKACSDILDDM----YRRRLMITLKIYRSFSASYAKDNEILDLFWSH 571
             AG       +L +M    + + L     + + FS  +     +L+   SH
Sbjct: 630 CAAGLLDEAHSLLSEMKQTYWPKYLQGYCSVVQGFSKKFIASLGLLEELESH 681



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 109/421 (25%), Positives = 199/421 (47%), Gaps = 27/421 (6%)

Query: 110 LSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQ-------MRVHNLM 162
           L +P +L    K++++   +S VL+   +  AN      G+  FD        M     +
Sbjct: 228 LPSPDLLALAEKVYEEMLASSCVLNK--VNTANFARCLCGMGKFDMAFQIIKVMMGKGFV 285

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
           P     + ++  L +    +  + ++++M  +GV  +++ Y +LI + CK+  +++    
Sbjct: 286 PDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQARSW 345

Query: 223 LCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR 282
             EM      A++ TY  L+  Y K     +A  + +RM   G  P+ +TY++L+ G C+
Sbjct: 346 FDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGLCK 405

Query: 283 EGRMREARRLFRDIKGAT------------------PNHVTYTTLIDGYCRANDLEEALR 324
            G +++A  ++  + G +                  PN VTY  LIDG C+A+ + +A  
Sbjct: 406 AGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQE 465

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           L + M + G  P  + Y++++   CK G+I +A  +   M++    P   T  +LI+A  
Sbjct: 466 LLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMF 525

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           K      AMKV ++M+E+    +  TY A+I G C+  E   A +LL  M + G SP+  
Sbjct: 526 KDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVV 585

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
           +Y+ L+DG       +  L+L  +  ++G   +   YR LI   C    +D A  L + M
Sbjct: 586 TYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEM 645

Query: 505 Q 505
           +
Sbjct: 646 K 646



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 120/442 (27%), Positives = 190/442 (42%), Gaps = 41/442 (9%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           + +    +MR ++ +P++     LL    K +      ++   M++ G   N  L+N L+
Sbjct: 125 EAISFLHRMRCNSCIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLV 184

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYC--KKGMHYEALAVQDRMEREG 265
           H+ C + D     KLL  M           YN  I   C  ++    + LA+ +++  E 
Sbjct: 185 HSYCNARDYPYAYKLLKRMADCGCPPGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEM 244

Query: 266 ISPDIVTYNSLIHGF----CREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDL 319
           ++   V        F    C  G+   A ++ + +  KG  P+  TY+ +I   C A  +
Sbjct: 245 LASSCVLNKVNTANFARCLCGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKV 304

Query: 320 EEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTL 379
           E+A  L + M + GV P V TY  ++   CK G I  A    +EM     + + VT   L
Sbjct: 305 EKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTAL 364

Query: 380 INAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL---LFGMLD 436
           ++AY K      A  + NRM++AG   +  TY AL+ G CKA E+  A E+   L G  D
Sbjct: 365 LHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSD 424

Query: 437 A-------------GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRA 483
                           +P+  +Y  L+DG C  +      +LLD  +S G   +  +Y A
Sbjct: 425 NVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDA 484

Query: 484 LIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR-R 542
           LI  FCK  K+D AQ +F  M   G L     YTSL                +D M++ R
Sbjct: 485 LIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSL----------------IDAMFKDR 528

Query: 543 RLMITLKIYRSFSASYAKDNEI 564
           RL + +K+      S    N +
Sbjct: 529 RLDLAMKVLSQMVESSCTPNVV 550



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 108/424 (25%), Positives = 178/424 (41%), Gaps = 25/424 (5%)

Query: 168 CTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEME 227
           CT +++ L +  L D       +M     + N+  Y  L+    K   +   ++++  M 
Sbjct: 110 CTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLTGFLKKKQLGWCKRIINMMM 169

Query: 228 FKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMR 287
            +    +   +N+L+  YC    +  A  +  RM   G  P  V YN  I   C    + 
Sbjct: 170 KEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCGCPPGYVAYNIFIGSICGGEELP 229

Query: 288 E------ARRLFRDIKGATP--NHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVV 339
                  A +++ ++  ++   N V         C     + A ++ +VM  KG  P   
Sbjct: 230 SPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDMAFQIIKVMMGKGFVPDTS 289

Query: 340 TYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRM 399
           TY+ ++  LC+  ++  A  L  EM    + PD  T   LI+++CK G    A    + M
Sbjct: 290 TYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQARSWFDEM 349

Query: 400 LEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNE 459
              G   +  TY AL+H + KAK++  A ++   M+DAG  P+  +YS LVDG C     
Sbjct: 350 RSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGLCKAGEI 409

Query: 460 ----EALLKLL-------DEFVSRG-----LCVDVSVYRALIRRFCKKEKVDYAQRLFNL 503
               E   KL+        +F   G     +  +V  Y ALI   CK  KV  AQ L + 
Sbjct: 410 QKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDA 469

Query: 504 MQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNE 563
           M  NG   + +IY +L   + + G+     ++   M +   + T+  Y S   +  KD  
Sbjct: 470 MLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRR 529

Query: 564 ILDL 567
            LDL
Sbjct: 530 -LDL 532



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 95/371 (25%), Positives = 162/371 (43%), Gaps = 12/371 (3%)

Query: 171 LLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKD 230
           L+  LA     DM ++V K+M + G   +         A CK     +    L  +E +D
Sbjct: 46  LVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEG---RWSDALVMIERED 102

Query: 231 VRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREAR 290
            + D      +I+   +  +  EA++   RM      P++VTY +L+ GF ++ ++   +
Sbjct: 103 FKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLTGFLKKKQLGWCK 162

Query: 291 RLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
           R+   +  +G  PN   + +L+  YC A D   A +L + MA  G  PG V YN  +  +
Sbjct: 163 RIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCGCPPGYVAYNIFIGSI 222

Query: 349 CKEGRIRD------ANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEA 402
           C    +        A ++  EM       + V         C +G    A ++   M+  
Sbjct: 223 CGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDMAFQIIKVMMGK 282

Query: 403 GLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEAL 462
           G + D  TY  +I   C+A +++ A  L   M   G +P   +Y+ L+D +C     E  
Sbjct: 283 GFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQA 342

Query: 463 LKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYA 522
               DE  S G   +V  Y AL+  + K +++  A  +FN M   G   +++ Y++L   
Sbjct: 343 RSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDG 402

Query: 523 YWRAGE-PKAC 532
             +AGE  KAC
Sbjct: 403 LCKAGEIQKAC 413



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 97/399 (24%), Positives = 160/399 (40%), Gaps = 24/399 (6%)

Query: 191 MVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDV--RADLFTYNTLIALYCKK 248
           M+   V A   L + L  AC  SS          + E KD   R    TYN L+ +    
Sbjct: 1   MISRRVAATAALRSSLRRACSSSSHT-------ADPELKDFGYRPSGATYNALVQVLATA 53

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR--DIKGATPNHVTY 306
           G       VQ  M   G   D  T        C+EGR  +A  +    D K  T   V  
Sbjct: 54  GQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEGRWSDALVMIEREDFKLDT---VLC 110

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
           T +I G   A+  +EA+     M      P VVTY ++L    K+ ++    R++N M +
Sbjct: 111 TQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMK 170

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMD- 425
           +   P+    N+L+++YC   D   A K+  RM + G       Y   I   C  +E+  
Sbjct: 171 EGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCGCPPGYVAYNIFIGSICGGEELPS 230

Query: 426 -----IAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSV 480
                +A+++   ML +    +  + +      C     +   +++   + +G   D S 
Sbjct: 231 PDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDMAFQIIKVMMGKGFVPDTST 290

Query: 481 YRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMY 540
           Y  +I   C+  KV+ A  LF  M+  G+  D   YT L  ++ +AG  +      D+M 
Sbjct: 291 YSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMR 350

Query: 541 RRRLMITLKIYRSFSASYAKDNEIL---DLFWSHVVDRG 576
                  +  Y +   +Y K  ++    D+F + ++D G
Sbjct: 351 SIGCSANVVTYTALLHAYLKAKQLPQASDIF-NRMIDAG 388



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 89/361 (24%), Positives = 150/361 (41%), Gaps = 48/361 (13%)

Query: 90  KNKHFKS-AQNMLEKIALRDFL-------STPSVLNALVKIHDDPDGNSHVLSWLVIFYA 141
           + KH  S A N++   AL D L           +L+A++    +P  N  +   L+  + 
Sbjct: 433 EGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEP--NHIIYDALIDGFC 490

Query: 142 NLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIH 201
            +    +  +VF +M     +P +H  T L++++ KDR  D+  KV  +MV+     N+ 
Sbjct: 491 KVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVV 550

Query: 202 LYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRM 261
            Y  +I   C+  +  K  KLL  ME K    ++ TY  LI    K G    +L +  +M
Sbjct: 551 TYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQM 610

Query: 262 EREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK------------------------ 297
             +G +P+ VTY  LI+  C  G + EA  L  ++K                        
Sbjct: 611 STKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYLQGYCSVVQGFSKKFIA 670

Query: 298 -----------GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVT---YNS 343
                      G  P    Y  LID + +A  LEEAL L + M        + +   Y S
Sbjct: 671 SLGLLEELESHGTVPIAPVYGLLIDNFSKAGRLEEALELHKEMMELSSSLNITSKDMYTS 730

Query: 344 ILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAG 403
           +++ LC   ++  A  L +E+  K + P+      LI    K+     A+++   + + G
Sbjct: 731 LIQALCLASQLEKAFELYSEITRKGVVPELSVFVCLIKGLIKVNKWNEALQLCYSICDEG 790

Query: 404 L 404
           +
Sbjct: 791 V 791


>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 791

 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 122/466 (26%), Positives = 212/466 (45%), Gaps = 9/466 (1%)

Query: 112 TPSVLNALVKIHDDPDGNS--HVLSWLVIFYANLKM--TQDGLQVFDQMRVHNLMPHLHA 167
           +   L  L  + DD  G S   V+S+  +     K   +      + +M    + P +  
Sbjct: 174 SQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVT 233

Query: 168 CTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEME 227
            + ++ +L K +  D   +V   MV+ GV+ N   YN ++H  C S    +    L +M 
Sbjct: 234 YSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMR 293

Query: 228 FKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMR 287
              V  D+ TYN+L+   CK G   EA  + D M + G+ PDI TY +L+ G+  +G + 
Sbjct: 294 SDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALV 353

Query: 288 EARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSIL 345
           E   L   +   G  P+H  +  LI  Y +   ++EA+ +   M   G+ P VVTY +++
Sbjct: 354 EMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVI 413

Query: 346 RKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLM 405
             LCK G + DA     +M ++ + P+ +   +LI++ C       A ++   ML+ G+ 
Sbjct: 414 GILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGIC 473

Query: 406 LDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKL 465
           L+   + ++IH  CK   +  +++L   M+  G  P+  +YS L+DGYC     +   KL
Sbjct: 474 LNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKL 533

Query: 466 LDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWR 525
           L    S G+  D   Y  LI  +C+  ++D A  LF  M  +G+  + + Y  +    + 
Sbjct: 534 LSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFH 593

Query: 526 AGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDN---EILDLF 568
                A  ++   + +    + L  Y        K+N   E L +F
Sbjct: 594 TRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMF 639



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 114/403 (28%), Positives = 205/403 (50%), Gaps = 6/403 (1%)

Query: 144 KMTQDGLQ-VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQ---LGVVAN 199
           K T D +  V  +M   + MP + +CT+LL  L  +  +    ++   M      G   +
Sbjct: 136 KRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPD 195

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
           +  Y  +I+   K  D DK      EM  + +  D+ TY+++IA  CK     +A+ V  
Sbjct: 196 VVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLT 255

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRAN 317
            M + G+ P+ +TYNS++HG+C   + +EA    + ++  G  P+ VTY +L+D  C+  
Sbjct: 256 TMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNG 315

Query: 318 DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCN 377
              EA ++ + M  +G+ P + TY ++L+    +G + + + LL+ M    I PD+   N
Sbjct: 316 RSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFN 375

Query: 378 TLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA 437
            LI AY K      AM V ++M + GL  +  TY A+I   CK+  +D A      M+D 
Sbjct: 376 ILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDE 435

Query: 438 GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYA 497
           G +P+   Y+ L+   C  +  +   +L+ E + RG+C++   + ++I   CK+ +V  +
Sbjct: 436 GLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIES 495

Query: 498 QRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMY 540
           ++LF+LM   G+  + + Y++L   Y  AG+    + +L  M+
Sbjct: 496 EKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMF 538



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 111/393 (28%), Positives = 196/393 (49%), Gaps = 4/393 (1%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           ++L+ +V+    PD   HV + L+  YA  +   + + VF +MR H L P++     ++ 
Sbjct: 357 ALLDLMVRNGIHPD--HHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIG 414

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
            L K    D     +++M+  G+  NI +Y  LIH+ C     DK E+L+ EM  + +  
Sbjct: 415 ILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICL 474

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           +   +N++I  +CK+G   E+  + D M R G+ P+++TY++LI G+C  G+M EA +L 
Sbjct: 475 NTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLL 534

Query: 294 RDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
             +   G  P+ VTY TLI+GYCR + +++AL L + M + GV P ++TYN IL+ L   
Sbjct: 535 SSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHT 594

Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
            R   A  L   + +     +  T N +++  CK   T  A+++   +    L L+  T+
Sbjct: 595 RRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTF 654

Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
             +I    K    D AK+L       G  P+Y +Y  + +    +   E L +L      
Sbjct: 655 NIMIGALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFFSMED 714

Query: 472 RGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
            G  VD  +   ++R   ++ ++  A    +++
Sbjct: 715 NGCTVDSGMLNFIVRELLQRGEITRAGTYLSMI 747



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 101/373 (27%), Positives = 186/373 (49%), Gaps = 4/373 (1%)

Query: 151 QVFDQMRVHNLMPHLHA-CTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           ++FD M    L P +   CT+L     K  L +M   +   MV+ G+  + H++N+LI A
Sbjct: 322 KIFDSMTKRGLEPDIATYCTLLQGYATKGALVEM-HALLDLMVRNGIHPDHHVFNILICA 380

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
             K   VD+   +  +M    +  ++ TY  +I + CK G   +A+   ++M  EG++P+
Sbjct: 381 YAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPN 440

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLRE 327
           I+ Y SLIH  C   +  +A  L  ++  +G   N + + ++I  +C+   + E+ +L +
Sbjct: 441 IIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFD 500

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
           +M   GV P V+TY++++   C  G++ +A +LL+ M    + PD VT NTLIN YC++ 
Sbjct: 501 LMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVS 560

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
               A+ +   M+ +G+  +  TY  ++ G    +    AKEL  G+  +G      +Y+
Sbjct: 561 RMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYN 620

Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGN 507
            ++ G C  N  +  L++        L ++   +  +I    K  + D A+ LF     N
Sbjct: 621 IILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSN 680

Query: 508 GILGDSVIYTSLA 520
           G++ +   Y  +A
Sbjct: 681 GLVPNYWTYRLMA 693



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 112/443 (25%), Positives = 208/443 (46%), Gaps = 20/443 (4%)

Query: 80  SHWTMIHILTK----NKHFKSAQNMLEKIALRDFLSTPSVLNALVK-------------- 121
           S+ T+I+   K    +K + +   ML++    D ++  S++ AL K              
Sbjct: 198 SYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTM 257

Query: 122 IHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLT 181
           + +    N    + ++  Y + +  ++ +    +MR   + P +     L++ L K+  +
Sbjct: 258 VKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRS 317

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
               K++  M + G+  +I  Y  L+        + ++  LL  M    +  D   +N L
Sbjct: 318 TEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNIL 377

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGA 299
           I  Y K+    EA+ V  +M + G++P++VTY ++I   C+ G + +A   F  +  +G 
Sbjct: 378 ICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGL 437

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
           TPN + YT+LI   C  +  ++A  L   M  +G+    + +NSI+   CKEGR+ ++ +
Sbjct: 438 TPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEK 497

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
           L + M    + P+ +T +TLI+ YC  G    A K+ + M   G+  D  TY  LI+G+C
Sbjct: 498 LFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYC 557

Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
           +   MD A  L   M+ +G SP+  +Y+ ++ G  +     A  +L       G  +++S
Sbjct: 558 RVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELS 617

Query: 480 VYRALIRRFCKKEKVDYAQRLFN 502
            Y  ++   CK    D A R+F 
Sbjct: 618 TYNIILHGLCKNNLTDEALRMFQ 640



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 104/403 (25%), Positives = 180/403 (44%), Gaps = 14/403 (3%)

Query: 187 VYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL--LCEMEFKDVRADLFTYNTLIAL 244
           V+ ++++ G  A+I+  N  +    + S    V +   +       V   + TY  LI  
Sbjct: 37  VFDELLRRGRGASIYGLNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYGILIGC 96

Query: 245 YCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA-----RRLFRDIKGA 299
            C+ G      A    + ++G   + +T+  L+ G C + R  +A     RR+       
Sbjct: 97  CCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTE--LSC 154

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMA---AKGVYPGVVTYNSILRKLCKEGRIRD 356
            P+  + T L+ G C  N  +EAL L  +MA     G  P VV+Y +++    KEG    
Sbjct: 155 MPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDK 214

Query: 357 ANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIH 416
           A    +EM +++I+PD VT +++I A CK      AM+V   M++ G+M +  TY +++H
Sbjct: 215 AYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILH 274

Query: 417 GFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCV 476
           G+C +++   A   L  M   G  P   +Y+ L+D  C         K+ D    RGL  
Sbjct: 275 GYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEP 334

Query: 477 DVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDIL 536
           D++ Y  L++ +  K  +     L +LM  NGI  D  ++  L  AY +  +      + 
Sbjct: 335 DIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVF 394

Query: 537 DDMYRRRLMITLKIYRSFSASYAKDNEILD--LFWSHVVDRGL 577
             M +  L   +  Y +      K   + D  L++  ++D GL
Sbjct: 395 SKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGL 437



 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 79/323 (24%), Positives = 129/323 (39%), Gaps = 8/323 (2%)

Query: 253 EALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGA----TPNHVTYTT 308
           +A  V D + R G    I   N  +    R        R  R  +      TP   TY  
Sbjct: 33  DARHVFDELLRRGRGASIYGLNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYGI 92

Query: 309 LIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDA-NRLLNEMNEK 367
           LI   CRA  L+        +  KG     +T+  +L+ LC + R  DA + +L  M E 
Sbjct: 93  LIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTEL 152

Query: 368 KIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLE---AGLMLDQFTYKALIHGFCKAKEM 424
              PD  +C  L+   C    +  A+++ + M +    G   D  +Y  +I+GF K  + 
Sbjct: 153 SCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDS 212

Query: 425 DIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRAL 484
           D A      MLD   SP   +YS ++   C     +  +++L   V  G+  +   Y ++
Sbjct: 213 DKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSI 272

Query: 485 IRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL 544
           +  +C  E+   A      M+ +G+  D V Y SL     + G       I D M +R L
Sbjct: 273 LHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGL 332

Query: 545 MITLKIYRSFSASYAKDNEILDL 567
              +  Y +    YA    ++++
Sbjct: 333 EPDIATYCTLLQGYATKGALVEM 355



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 65/268 (24%), Positives = 103/268 (38%), Gaps = 72/268 (26%)

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
           K++  MV++GV  N+  Y+ LI   C +  +D+  KLL  M    ++ D  TYNTLI  Y
Sbjct: 497 KLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGY 556

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLI---------------------------- 277
           C+     +ALA+   M   G+SP+I+TYN ++                            
Sbjct: 557 CRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLEL 616

Query: 278 -------HGFCREGRMREARRLFRDI---------------------------------- 296
                  HG C+     EA R+F+++                                  
Sbjct: 617 STYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVA 676

Query: 297 ---KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGR 353
               G  PN+ TY  + +       LEE  +L   M   G        N I+R+L + G 
Sbjct: 677 FSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFFSMEDNGCTVDSGMLNFIVRELLQRGE 736

Query: 354 IRDANRLLNEMNEKKIAPDNVTCNTLIN 381
           I  A   L+ ++EK  + +  T +  I+
Sbjct: 737 ITRAGTYLSMIDEKHFSLEASTASLFID 764


>gi|356551783|ref|XP_003544253.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 576

 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 132/481 (27%), Positives = 219/481 (45%), Gaps = 42/481 (8%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           ++G +  + M      P + ACT L+    K   T    ++   + + G V ++  YNVL
Sbjct: 96  EEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDVTSYNVL 155

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           I   CKS ++++  ++L  M    V  +  TY+ ++   C +G   +A+ V  R  +   
Sbjct: 156 ISGYCKSGEIEEALRVLDRM---GVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKC 212

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
            PD+VT   LI   C+E  + +A +LF ++  KG  P+ VTY  LI G+C+   L+EA+R
Sbjct: 213 YPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIR 272

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
             + + + G  P V+++N ILR LC  GR  DA +LL  M  K   P  VT N LIN  C
Sbjct: 273 FLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLC 332

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGML--------- 435
           + G    A+ V   M + G   +  ++  LI GFC  K +D A E L  M+         
Sbjct: 333 QKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIV 392

Query: 436 ----------------DA----------GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEF 469
                           DA          G SPS  SY+ ++DG       E  ++LL+E 
Sbjct: 393 TYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEM 452

Query: 470 VSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEP 529
             +GL  D+    +++    ++ KV  A + F+ ++   I  ++ IY S+     ++ + 
Sbjct: 453 CYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQT 512

Query: 530 KACSDILDDMYRRRLMITLKIYRSF--SASYAKDNEILDLFWSHVVDRGLMSKHIFKEMQ 587
               D L DM  +    T   Y +     +Y    E      + +  RGL+ + + +++ 
Sbjct: 513 SLAIDFLADMVAKGCKPTEATYTTLIKGITYEGLAEDASKLSNELYSRGLVKRSLVEKVS 572

Query: 588 L 588
           L
Sbjct: 573 L 573



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 99/388 (25%), Positives = 173/388 (44%), Gaps = 36/388 (9%)

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           ++ ++++  + L  M  K    D+     LI  +CK G    A  +   +E  G   D+ 
Sbjct: 91  RNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDVT 150

Query: 272 TYNSLIHGFCREGRMREARRLFRDIKGATPNHVTY------------------------- 306
           +YN LI G+C+ G + EA R+  D  G +PN  TY                         
Sbjct: 151 SYNVLISGYCKSGEIEEALRVL-DRMGVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQ 209

Query: 307 ----------TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRD 356
                     T LID  C+ + + +A++L   M  KG  P VVTYN +++  CK GR+ +
Sbjct: 210 SKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDE 269

Query: 357 ANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIH 416
           A R L ++      PD ++ N ++ + C  G    AMK+   ML  G +    T+  LI+
Sbjct: 270 AIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILIN 329

Query: 417 GFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCV 476
             C+   +  A  +L  M   G +P+  S++ L+ G+CN    +  ++ L+  VSRG   
Sbjct: 330 FLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYP 389

Query: 477 DVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDIL 536
           D+  Y  L+   CK  KVD A  + + +   G     + Y ++     + G+ +   ++L
Sbjct: 390 DIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELL 449

Query: 537 DDMYRRRLMITLKIYRSFSASYAKDNEI 564
           ++M  + L   L    S     +++ ++
Sbjct: 450 EEMCYKGLKPDLITCTSVVGGLSREGKV 477



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 56/183 (30%), Positives = 93/183 (50%), Gaps = 3/183 (1%)

Query: 345 LRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGL 404
           LR+L + G + + +R L  M  K  +PD + C  LI  +CKIG T +A ++   + E+G 
Sbjct: 86  LRRLIRNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGA 145

Query: 405 MLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLK 464
           ++D  +Y  LI G+CK+ E++ A  +L  M   G SP+  +Y  ++   C++   +  ++
Sbjct: 146 VIDVTSYNVLISGYCKSGEIEEALRVLDRM---GVSPNAATYDAVLCSLCDRGKLKQAMQ 202

Query: 465 LLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYW 524
           +L   +      DV     LI   CK+  V  A +LFN M+  G   D V Y  L   + 
Sbjct: 203 VLGRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFC 262

Query: 525 RAG 527
           + G
Sbjct: 263 KGG 265



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 58/223 (26%), Positives = 99/223 (44%), Gaps = 4/223 (1%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           +VL  + K    P  NS   + L+  + N K     ++  + M      P +    +LL 
Sbjct: 342 NVLEMMPKHGHTP--NSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLT 399

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
           +L KD   D    +  ++   G   ++  YN +I    K    +   +LL EM +K ++ 
Sbjct: 400 ALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKP 459

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           DL T  +++    ++G   EA+     ++R  I P+   YNS+I G C+  +   A    
Sbjct: 460 DLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFL 519

Query: 294 RDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGV 334
            D+  KG  P   TYTTLI G       E+A +L   + ++G+
Sbjct: 520 ADMVAKGCKPTEATYTTLIKGITYEGLAEDASKLSNELYSRGL 562


>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
 gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
          Length = 555

 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 109/392 (27%), Positives = 192/392 (48%), Gaps = 2/392 (0%)

Query: 155 QMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSS 214
           QM +  +   + + T+L+N   +    D  + V  K+++LG+  N+  ++ LI+  C   
Sbjct: 116 QMEMAGISHDVLSLTILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEG 175

Query: 215 DVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYN 274
            + +  +L   M  +  + ++ +Y+ +I   C+ G   E + + + M+  G  PD+V YN
Sbjct: 176 KIGRAIELFDVMVARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYN 235

Query: 275 SLIHGFCREGRMREARRLFRDIKGAT--PNHVTYTTLIDGYCRANDLEEALRLREVMAAK 332
           +++   C++  + EA  +F  +KG    P  VTYT+LI G       +EA  L   M   
Sbjct: 236 TIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGG 295

Query: 333 GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
            + P +V ++ ++  +CKEG + +A  +L  M E  + PD  T NTL+N YC   +   A
Sbjct: 296 NIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEA 355

Query: 393 MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
            KV   M+  G M D F++  L++G+CKAK +D AK+L   M   G  P   SY+ L+ G
Sbjct: 356 RKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISG 415

Query: 453 YCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGD 512
            C         +L  +  S G   ++  Y  L+    K+  +D A  LF  M+ +G+  D
Sbjct: 416 LCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPD 475

Query: 513 SVIYTSLAYAYWRAGEPKACSDILDDMYRRRL 544
            V Y  +     + G+ K   ++  ++  + L
Sbjct: 476 LVTYNIMIDGMCKYGKFKDARELFAELSVKGL 507



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 116/383 (30%), Positives = 187/383 (48%), Gaps = 2/383 (0%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
            D L  F+ M   N +P +     L ++L + +    V  + K+M   G+  ++    +L
Sbjct: 73  NDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTIL 132

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           I+  C+   VD    +L ++    +  ++ T++TLI  +C +G    A+ + D M   G 
Sbjct: 133 INCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGY 192

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALR 324
            P++ +Y+ +I G CR G+  E  +L   +K  G  P+ V Y T++D  C+   + EA+ 
Sbjct: 193 KPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVH 252

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           +   M   G+ P VVTY S++  L   GR ++A  LLNEM    I PD V  + LI+  C
Sbjct: 253 IFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMC 312

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           K G+ + A  +   M E G+  D  TY  L++G+C   E+  A+++   M+  G  P   
Sbjct: 313 KEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVF 372

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
           S+S LV+GYC     +   +L DE   RGL  D   Y  LI   C+  +   A+ LF  M
Sbjct: 373 SFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDM 432

Query: 505 QGNGILGDSVIYTSLAYAYWRAG 527
             NG   + V Y+ L     + G
Sbjct: 433 HSNGYPPNLVTYSILLDCLSKQG 455



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 116/405 (28%), Positives = 191/405 (47%), Gaps = 5/405 (1%)

Query: 128 GNSH-VLSWLVIF--YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMV 184
           G SH VLS  ++   +  L     G  V  ++    L P++   + L+N    +      
Sbjct: 121 GISHDVLSLTILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRA 180

Query: 185 WKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIAL 244
            +++  MV  G   N+H Y+++I   C+     +V KLL  M+      D+  YNT++  
Sbjct: 181 IELFDVMVARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDR 240

Query: 245 YCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGAT--PN 302
            CK  +  EA+ +  +M+  GI P +VTY SLIHG    GR +EA  L  ++KG    P+
Sbjct: 241 LCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPD 300

Query: 303 HVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLN 362
            V ++ LID  C+  ++ EA  + + M   GV P V TYN+++   C    + +A ++  
Sbjct: 301 LVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFE 360

Query: 363 EMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAK 422
            M  K   PD  + + L+N YCK      A ++ + M   GL+ D  +Y  LI G C+A+
Sbjct: 361 VMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQAR 420

Query: 423 EMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYR 482
               A+EL   M   G+ P+  +YS L+D    +   +  + L     + GL  D+  Y 
Sbjct: 421 RPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYN 480

Query: 483 ALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
            +I   CK  K   A+ LF  +   G+  ++ + T       + G
Sbjct: 481 IMIDGMCKYGKFKDARELFAELSVKGLQPNNWVCTPTIDGVCKGG 525



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 109/394 (27%), Positives = 192/394 (48%), Gaps = 4/394 (1%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           SVL  ++K+  +P  N    S L+  +         +++FD M      P++H+ ++++ 
Sbjct: 147 SVLGKIIKLGLEP--NVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIK 204

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
            L +   T  V K+ + M  +G   ++ +YN ++   CK   V++   + C+M+   +  
Sbjct: 205 GLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILP 264

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
            + TY +LI      G   EA  + + M+   I PD+V ++ LI   C+EG + EAR + 
Sbjct: 265 TVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVIL 324

Query: 294 RDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
           + +   G  P+  TY TL++GYC   ++ EA ++ EVM +KG  P V +++ ++   CK 
Sbjct: 325 KTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKA 384

Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
            RI +A +L +EM  + + PD V+ NTLI+  C+      A ++   M   G   +  TY
Sbjct: 385 KRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTY 444

Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
             L+    K   +D A  L   M ++G  P   +Y+ ++DG C     +   +L  E   
Sbjct: 445 SILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSV 504

Query: 472 RGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           +GL  +  V    I   CK   +D A + F  M+
Sbjct: 505 KGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQME 538



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 100/355 (28%), Positives = 176/355 (49%), Gaps = 2/355 (0%)

Query: 188 YKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCK 247
           +  MV    + +I  +  L  A  +      V  L  +ME   +  D+ +   LI  +C+
Sbjct: 79  FNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTILINCFCR 138

Query: 248 KGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVT 305
                   +V  ++ + G+ P+++T+++LI+GFC EG++  A  LF  +  +G  PN  +
Sbjct: 139 LCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHS 198

Query: 306 YTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMN 365
           Y+ +I G CR     E ++L E M   G  P VV YN+I+ +LCK+  + +A  +  +M 
Sbjct: 199 YSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMK 258

Query: 366 EKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMD 425
              I P  VT  +LI+    +G    A  + N M    +M D   +  LI   CK  E+ 
Sbjct: 259 GTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVS 318

Query: 426 IAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
            A+ +L  M + G  P   +Y+ L++GYC +       K+ +  +S+G   DV  +  L+
Sbjct: 319 EARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILV 378

Query: 486 RRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMY 540
             +CK +++D A++LF+ M   G++ D+V Y +L     +A  P    ++  DM+
Sbjct: 379 NGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMH 433



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 94/351 (26%), Positives = 156/351 (44%), Gaps = 37/351 (10%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N H  S ++     +  T + +++ + M+V    P +     +++ L KDRL +    ++
Sbjct: 195 NVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIF 254

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
            KM   G++  +  Y  LIH         +   LL EM+  ++  DL  ++ LI + CK+
Sbjct: 255 CKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKE 314

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSL-------------------------------- 276
           G   EA  +   M   G+ PD+ TYN+L                                
Sbjct: 315 GEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSF 374

Query: 277 ---IHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAA 331
              ++G+C+  R+ EA++LF ++  +G  P+ V+Y TLI G C+A    EA  L + M +
Sbjct: 375 SILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHS 434

Query: 332 KGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTAS 391
            G  P +VTY+ +L  L K+G +  A  L   M    + PD VT N +I+  CK G    
Sbjct: 435 NGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKD 494

Query: 392 AMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           A ++   +   GL  + +     I G CK   +D A +    M     SP+
Sbjct: 495 ARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEKDDCSPA 545



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 65/247 (26%), Positives = 111/247 (44%)

Query: 318 DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCN 377
           ++ +AL     M      P +V +  +   L +    +    L  +M    I+ D ++  
Sbjct: 71  NINDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLT 130

Query: 378 TLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA 437
            LIN +C++        V  ++++ GL  +  T+  LI+GFC   ++  A EL   M+  
Sbjct: 131 ILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVAR 190

Query: 438 GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYA 497
           G+ P+  SYS ++ G C       ++KLL+     G   DV +Y  ++ R CK   V+ A
Sbjct: 191 GYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEA 250

Query: 498 QRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSAS 557
             +F  M+G GIL   V YTSL +     G  K    +L++M    +M  L  +      
Sbjct: 251 VHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDI 310

Query: 558 YAKDNEI 564
             K+ E+
Sbjct: 311 MCKEGEV 317


>gi|222625337|gb|EEE59469.1| hypothetical protein OsJ_11675 [Oryza sativa Japonica Group]
          Length = 1095

 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 128/489 (26%), Positives = 226/489 (46%), Gaps = 9/489 (1%)

Query: 85  IHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHD--DPDGNSHVLSWLVIFYAN 142
           +HIL + +    A ++L  +AL  F S  ++ ++L++     DP  N   +  LV  Y  
Sbjct: 115 VHILVQAQMPSQAMSVLRHLALTGF-SCSAIFSSLLRTISRCDPT-NLFSVDLLVNAYVK 172

Query: 143 LKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHL 202
                D       M        L +C  +LN+L     ++ VW   K+ +      ++  
Sbjct: 173 EGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKSEYVWLFLKESLDRKFPLDVTT 232

Query: 203 YNVLIHACCKSSDVDKVEKLLCEMEFKDVR-ADLFTYNTLIALYCKKGMHYEALAVQDRM 261
            N+++++ C    + K E +L +M  K+ R  +  TYNT++  Y KKG    AL + D M
Sbjct: 233 CNIVLNSLCTQGKLSKAESMLQKM--KNCRLPNAVTYNTILNWYVKKGRCKSALRILDDM 290

Query: 262 EREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGA--TPNHVTYTTLIDGYCRANDL 319
           E+ GI  D+ TYN +I   C+  R   A  L + ++    TP+  +Y TLI G+     +
Sbjct: 291 EKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKI 350

Query: 320 EEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTL 379
             A+ +   M  + + P V TY +++   C+ GR  +A R+L EM    + P  +T + L
Sbjct: 351 NLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPSELTYSAL 410

Query: 380 INAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGF 439
           +N YCK      A+ +   +    + +++  Y  LI GFC+  E+  AK++L  ML  G 
Sbjct: 411 LNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQILKCMLADGI 470

Query: 440 SPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQR 499
            P   +YS L++G C         ++L      G+  +  +Y  L+  FCK      A +
Sbjct: 471 DPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALK 530

Query: 500 LFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYA 559
            F  +  +G++ +SVI+ +L  +++R G           M R ++   +  +     SY 
Sbjct: 531 YFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYC 590

Query: 560 KDNEILDLF 568
           +   +L+ F
Sbjct: 591 QRGNVLEAF 599



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 115/419 (27%), Positives = 205/419 (48%), Gaps = 3/419 (0%)

Query: 149 GLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIH 208
            + +F+QM   +L P +   T L++   ++  TD   +V  +M   GV  +   Y+ L++
Sbjct: 353 AIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPSELTYSALLN 412

Query: 209 ACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISP 268
             CK S +     L+  +  + +  +   Y  LI  +C+ G   +A  +   M  +GI P
Sbjct: 413 GYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQILKCMLADGIDP 472

Query: 269 DIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLR 326
           D++TY++LI+G C+ G + E + +   ++  G  PN+V YTTL+  +C+A   +EAL+  
Sbjct: 473 DVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYF 532

Query: 327 EVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKI 386
             +   G+    V +N++L    +EG I +A +    M+  KI+ D  + N +I++YC+ 
Sbjct: 533 VDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQR 592

Query: 387 GDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSY 446
           G+   A  V + M+  G   D  TY +L+ G C+   +  AKE +  +L+   +    + 
Sbjct: 593 GNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTL 652

Query: 447 SWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQG 506
           + L+ G C     +  L L ++ V+R +  D   Y  L+  FCK+ KV  A  L  +M  
Sbjct: 653 NTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLE 712

Query: 507 NGILGDSVIYTSLAYAYWRAGEPKACSDILDDMY-RRRLMITLKIYRSFSASYAKDNEI 564
            G++ D++ YT L       G+ KA S +  ++  +  L      Y S    Y K  +I
Sbjct: 713 KGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQI 771



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 108/402 (26%), Positives = 188/402 (46%), Gaps = 5/402 (1%)

Query: 125 DPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMV 184
           DPD  ++  S L+     + M  +  ++  +M+   ++P+    T L+    K       
Sbjct: 471 DPDVITY--SALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEA 528

Query: 185 WKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIAL 244
            K +  + + G+VAN  ++N L+ +  +   + + E+    M    +  D+ ++N +I  
Sbjct: 529 LKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDS 588

Query: 245 YCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPN 302
           YC++G   EA +V D M R G  PDI TY SL+ G C+ G + +A+     +  K    +
Sbjct: 589 YCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAID 648

Query: 303 HVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLN 362
             T  TL+ G C+   L+EAL L E M  + + P   TY  +L   CK G++  A  LL 
Sbjct: 649 EKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQ 708

Query: 363 EMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML-EAGLMLDQFTYKALIHGFCKA 421
            M EK + PD +    L+N     G   +A  +   ++ + GL  D   Y ++++G+ K 
Sbjct: 709 MMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKG 768

Query: 422 KEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVY 481
            +++  + L+  M +    PS  SY+ L+ GY  K      L L  + V  G+  D   Y
Sbjct: 769 GQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTY 828

Query: 482 RALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAY 523
           R LI   C+   ++ A +    M   G+  D++ +  L  A+
Sbjct: 829 RLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAF 870



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 101/399 (25%), Positives = 182/399 (45%), Gaps = 19/399 (4%)

Query: 170  VLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFK 229
             LL  + K    D    + +KMV   ++ + + Y +L+   CK   V     LL  M  K
Sbjct: 654  TLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEK 713

Query: 230  DVRADLFTYNTLIALYCKKG-MHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
             +  D   Y  L+     +G +   +   Q+ + +EG+  D + YNS+++G+ + G++ E
Sbjct: 714  GLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINE 773

Query: 289  ARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILR 346
              RL R++      P+  +Y  L+ GY +   L   L L   M  +G+ P  VTY  ++ 
Sbjct: 774  IERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIF 833

Query: 347  KLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK----------------IGDTA 390
             LC+ G I  A + L +M  + + PDN+  + LI A+ +                +GD  
Sbjct: 834  GLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWVGDID 893

Query: 391  SAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLV 450
             A ++K  M   G++  +    +++ G CK  +++ A  +   ++ AG  P+  +++ L+
Sbjct: 894  GAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLM 953

Query: 451  DGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGIL 510
             G C +   +    L     S GL VDV  Y  LI   C K+ +  A  L+  M+  G+L
Sbjct: 954  HGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLL 1013

Query: 511  GDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLK 549
             +   Y +L  A +  G  +    +L D+  R ++ + K
Sbjct: 1014 PNITTYITLTGAMYATGTMQDGEKLLKDIEDRGIVPSYK 1052



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 112/460 (24%), Positives = 196/460 (42%), Gaps = 62/460 (13%)

Query: 185  WKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIAL 244
            + VY  MV+ G   +I  Y  L+   C+   + + ++ +  +  K    D  T NTL+  
Sbjct: 599  FSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVG 658

Query: 245  YCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPN 302
             CK G   EAL + ++M    I PD  TY  L+ GFC+ G++  A  L + +  KG  P+
Sbjct: 659  ICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPD 718

Query: 303  HVTYTTLIDGYCRANDLEEA-LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLL 361
             + YT L++G      ++ A    +E++  +G+Y   + YNS++    K G+I +  RL+
Sbjct: 719  TIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLM 778

Query: 362  NEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKA 421
              M+E ++ P + + N L++ Y K G  +  + +   M++ G+  D  TY+ LI G C+ 
Sbjct: 779  RNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEY 838

Query: 422  KEMDIAKELL----------------------------------------FGMLDAGFS- 440
              ++IA + L                                         G +D  F  
Sbjct: 839  GLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWVGDIDGAFEL 898

Query: 441  ----------PSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCK 490
                      PS  + S +V G C     E  + +    +  G+   ++ +  L+   CK
Sbjct: 899  KEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCK 958

Query: 491  KEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKI 550
            + K+D A  L  LM+  G+  D V Y  L              D+ ++M  + L+  +  
Sbjct: 959  EFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITT 1018

Query: 551  YRSFS-ASYA----KDNEILDLFWSHVVDRGLMSKHIFKE 585
            Y + + A YA    +D E L      + DRG++  +   E
Sbjct: 1019 YITLTGAMYATGTMQDGEKL---LKDIEDRGIVPSYKHPE 1055



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 95/345 (27%), Positives = 153/345 (44%), Gaps = 19/345 (5%)

Query: 149  GLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMV-QLGVVANIHLYNVLI 207
             L +   M    L+P   A T LLN L  +        ++++++ + G+ A+   YN ++
Sbjct: 703  ALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMM 762

Query: 208  HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
            +   K   ++++E+L+  M   +V     +YN L+  Y KKG     L +   M +EGI 
Sbjct: 763  NGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIK 822

Query: 268  PDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCR---------- 315
            PD VTY  LI G C  G +  A +      ++G  P+++ +  LI  +            
Sbjct: 823  PDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQL 882

Query: 316  ------ANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI 369
                    D++ A  L+E M A GV P  V  +SI+R LCK G++ +A  + + +    +
Sbjct: 883  FSYMKWVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGM 942

Query: 370  APDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKE 429
             P   T  TL++  CK      A  +K  M   GL +D  TY  LI G C  K +  A +
Sbjct: 943  VPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALD 1002

Query: 430  LLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGL 474
            L   M   G  P+  +Y  L          +   KLL +   RG+
Sbjct: 1003 LYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDRGI 1047



 Score = 45.4 bits (106), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 34/160 (21%), Positives = 67/160 (41%), Gaps = 37/160 (23%)

Query: 146  TQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNV 205
             ++ + VF  +    ++P +   T L++ L K+   D  + + + M   G+  ++  YNV
Sbjct: 927  VEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNV 986

Query: 206  LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
            LI   C        +K +C                            +AL + + M+ +G
Sbjct: 987  LITGLCN-------KKCIC----------------------------DALDLYEEMKSKG 1011

Query: 266  ISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNH 303
            + P+I TY +L       G M++  +L +DI  +G  P++
Sbjct: 1012 LLPNITTYITLTGAMYATGTMQDGEKLLKDIEDRGIVPSY 1051


>gi|449479180|ref|XP_004155527.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
           mitochondrial-like [Cucumis sativus]
          Length = 653

 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 126/462 (27%), Positives = 218/462 (47%), Gaps = 22/462 (4%)

Query: 57  PSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVL 116
           P ++  FF WA      Y H ++ H ++I +LT +      + +  ++  R  L T S  
Sbjct: 130 PEVAVRFFFWA-GKQKKYVHKIECHVSLIELLTFSADLVKIRLVFFELKDRGLLMTESAA 188

Query: 117 NALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLA 176
           N+L+K                  + NL + ++ L V+ +M+ + + P L+    L+N L 
Sbjct: 189 NSLIKS-----------------FGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNGLV 231

Query: 177 KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLF 236
                +   KV++ M    +V +   YN++I   CK+  + K  +   +ME K+V+ D  
Sbjct: 232 NSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKI 291

Query: 237 TYNTLI-ALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD 295
           TY TLI A Y ++      L++   ME  G+     +Y+ +I G C++ +  EA  +F  
Sbjct: 292 TYMTLIQACYSERDFD-TCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFET 350

Query: 296 I--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGR 353
           +  KG   N   YT LID Y +   +EEA+RL E M  +G  P  VTY+ ++  LCK GR
Sbjct: 351 MNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGR 410

Query: 354 IRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKA 413
           + D   L +    K +A + +   +LI+   K G    A  +   M E G   D + Y A
Sbjct: 411 LDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNA 470

Query: 414 LIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
           +I    K  ++D A  L   M + G   +  +++ L+DG   ++  E  +K  D+ + +G
Sbjct: 471 IIDALAKHGKIDQALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKG 530

Query: 474 LCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVI 515
           +   V+ +RAL    C   KV  A ++ + +   GI+ ++  
Sbjct: 531 ITPTVASFRALAIGLCLCGKVARACKILDDLAPMGIIPETAF 572



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 102/392 (26%), Positives = 174/392 (44%), Gaps = 6/392 (1%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           VF +++   L+    A   L+ S     L + +  V+++M + G+  +++ YN L++   
Sbjct: 172 VFFELKDRGLLMTESAANSLIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNGLV 231

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
            S  ++  EK+   M+   +  D  TYN +I  YCK G   +A+     ME + + PD +
Sbjct: 232 NSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKI 291

Query: 272 TYNSLIHGFCREGRMREARRLFRDIKG---ATPNHVTYTTLIDGYCRANDLEEALRLREV 328
           TY +LI     E        L+ +++      P H +Y+ +I G C+     EA  + E 
Sbjct: 292 TYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPH-SYSLVIGGLCKQRKCMEAYAVFET 350

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M  KG    V  Y +++    K G + +A RL   M  +   PD VT + L+N  CK G 
Sbjct: 351 MNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGR 410

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFS-PSYCSYS 447
               M++ +     G+ ++   Y +LI G  KA  ++ A+ L   M + G +  SYC Y+
Sbjct: 411 LDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYC-YN 469

Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGN 507
            ++D        +  L L       G    V  +  LI    K+ K + A + ++ M   
Sbjct: 470 AIIDALAKHGKIDQALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDK 529

Query: 508 GILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
           GI      + +LA      G+      ILDD+
Sbjct: 530 GITPTVASFRALAIGLCLCGKVARACKILDDL 561



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 73/271 (26%), Positives = 127/271 (46%), Gaps = 2/271 (0%)

Query: 274 NSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAA 331
           NSLI  F   G + E   ++R +K  G  P+  TY  L++G   +  +E A ++ EVM  
Sbjct: 189 NSLIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDG 248

Query: 332 KGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTAS 391
             + P  VTYN +++  CK G+++ A     +M  K + PD +T  TLI A     D  +
Sbjct: 249 GKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDT 308

Query: 392 AMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVD 451
            + +   M E GL +   +Y  +I G CK ++   A  +   M   G   +   Y+ L+D
Sbjct: 309 CLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALID 368

Query: 452 GYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILG 511
            Y    + E  ++L +   + G   D   Y  L+   CK  ++D    LF+  +  G+  
Sbjct: 369 SYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAI 428

Query: 512 DSVIYTSLAYAYWRAGEPKACSDILDDMYRR 542
           +++ Y SL     +AG  +   ++ ++M  +
Sbjct: 429 NAMFYASLIDGLGKAGRIEDAENLFEEMSEK 459



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/327 (22%), Positives = 143/327 (43%), Gaps = 38/327 (11%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           L ++ +M    L    H+ ++++  L K R     + V++ M Q G  AN+ +Y  LI +
Sbjct: 310 LSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDS 369

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
             K+  +++  +L   M+ +    D  TY+ L+   CK G   + + + D    +G++ +
Sbjct: 370 YSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAIN 429

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDI--------------------------------- 296
            + Y SLI G  + GR+ +A  LF ++                                 
Sbjct: 430 AMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFG 489

Query: 297 ----KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEG 352
               +G      T+T LIDG  + +  EEA++  + M  KG+ P V ++ ++   LC  G
Sbjct: 490 RMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPTVASFRALAIGLCLCG 549

Query: 353 RIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYK 412
           ++  A ++L+++    I P+      +IN  CK      A K+ + +++ G  +      
Sbjct: 550 KVARACKILDDLAPMGIIPETAF-EDMINTLCKAQRIKEACKLADGIVDRGREIPGRIRT 608

Query: 413 ALIHGFCKAKEMDIAKELLFGMLDAGF 439
            LI+   KA   D+  +L+   +  G+
Sbjct: 609 VLINALRKAGNSDLVIKLMHSKIGIGY 635



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 76/294 (25%), Positives = 120/294 (40%), Gaps = 2/294 (0%)

Query: 275 SLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAK 332
           SLI        + + R +F ++K  G         +LI  +     +EE L +   M   
Sbjct: 155 SLIELLTFSADLVKIRLVFFELKDRGLLMTESAANSLIKSFGNLGLVEELLWVWRRMKEN 214

Query: 333 GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
           G+ P + TYN ++  L     I  A ++   M+  KI PD VT N +I  YCK G    A
Sbjct: 215 GIDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKA 274

Query: 393 MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
           M+    M    +  D+ TY  LI      ++ D    L   M + G      SYS ++ G
Sbjct: 275 MEKFRDMEMKNVKPDKITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYSLVIGG 334

Query: 453 YCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGD 512
            C +        + +    +G   +V++Y ALI  + K   ++ A RLF  M+  G   D
Sbjct: 335 LCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFEPD 394

Query: 513 SVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
           +V Y+ L     ++G      ++ D    + + I    Y S      K   I D
Sbjct: 395 AVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIED 448


>gi|357153642|ref|XP_003576519.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Brachypodium distachyon]
          Length = 620

 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 112/389 (28%), Positives = 193/389 (49%), Gaps = 5/389 (1%)

Query: 133 LSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMV 192
           L  LVI  + + +  D L VF ++     +P L AC  +L+ L K R  D VWK++ +M+
Sbjct: 96  LGVLVIALSQMGLHDDALSVFCRLPT---LPALPACNAILDGLVKARRFDRVWKLFDEML 152

Query: 193 QLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHY 252
             G+V ++  YN L++AC    D+ K  ++  +M  + +  ++ TY+T+I + C++G   
Sbjct: 153 SRGMVPSLVTYNTLVNACRHEGDMTKAWEVWNQMVARRIDPNVVTYSTMICVLCEEGCVI 212

Query: 253 EALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLI 310
           EA  +   M+  G+ P++ TYN+L+   C+   +     L++++   G  PN V  TTLI
Sbjct: 213 EAERLFIMMKETGVQPNLYTYNALMSSHCKRDGVNRTLTLYQELLKSGLVPNAVIITTLI 272

Query: 311 DGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIA 370
            G+  AN + +       M   G+ P V  YNS++    + G  ++A  +  +M    + 
Sbjct: 273 GGFFLANRISDVKNAFLEMHRYGIAPTVPVYNSLIDGAFRSGYAQEALTVYQDMTRVGLC 332

Query: 371 PDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL 430
           PD  TC+ ++   C  G    A +    M ++G+ L+   Y ALI   CK   +  A   
Sbjct: 333 PDEFTCSIIVRGLCCGGQVQVATRFLELMQQSGINLNAAAYNALIDEHCKDGNLAEALAT 392

Query: 431 LFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCK 490
              M + G  P+  +YS L+DG+  K   E  + +  E V++G+  +V  Y A+I    K
Sbjct: 393 CTRMNEVGIEPNVVTYSSLIDGHSKKRKMEIAMGIYMEMVAKGVEPNVLTYTAMIHGHAK 452

Query: 491 KEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
              +D A RL   M   GI  +++  + L
Sbjct: 453 FGDLDAAFRLHKEMAEKGISSNAITVSVL 481



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 111/445 (24%), Positives = 191/445 (42%), Gaps = 47/445 (10%)

Query: 49  NLYNCC-HIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALR 107
            L N C H   ++ A+  W +        ++ ++ TMI +L +      A+ +   I ++
Sbjct: 165 TLVNACRHEGDMTKAWEVWNQMVARRIDPNVVTYSTMICVLCEEGCVIEAERLF--IMMK 222

Query: 108 DFLSTPSVL--NALVKIHDDPDG------------------NSHVLSWLVIFYANLKMTQ 147
           +    P++   NAL+  H   DG                  N+ +++ L+  +       
Sbjct: 223 ETGVQPNLYTYNALMSSHCKRDGVNRTLTLYQELLKSGLVPNAVIITTLIGGFFLANRIS 282

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D    F +M  + + P +     L++   +         VY+ M ++G+  +    ++++
Sbjct: 283 DVKNAFLEMHRYGIAPTVPVYNSLIDGAFRSGYAQEALTVYQDMTRVGLCPDEFTCSIIV 342

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
              C    V    + L  M+   +  +   YN LI  +CK G   EALA   RM   GI 
Sbjct: 343 RGLCCGGQVQVATRFLELMQQSGINLNAAAYNALIDEHCKDGNLAEALATCTRMNEVGIE 402

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
           P++VTY+SLI G  ++ +M  A  ++ ++  KG  PN +TYT +I G+ +  DL+ A RL
Sbjct: 403 PNVVTYSSLIDGHSKKRKMEIAMGIYMEMVAKGVEPNVLTYTAMIHGHAKFGDLDAAFRL 462

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPD------------- 372
            + MA KG+    +T + ++  LC+E R++DA   + +   +K   D             
Sbjct: 463 HKEMAEKGISSNAITVSVLVDGLCRESRVQDAVMFIMKYAGQKKPGDINSFCSNYTTEED 522

Query: 373 -----NVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIA 427
                +VT  TLI      G    A K  + M E+ ++ D FTY  LI G C    +  A
Sbjct: 523 CSILNSVTYMTLIYGLYIDGQYHEAGKFFSCMRESDMVPDSFTYSLLIRGQCMLGYVLNA 582

Query: 428 KELLFGMLDAGFSP----SYCSYSW 448
             L   M+  G  P    + C   W
Sbjct: 583 MMLYADMVKIGVKPRRYATVCPEIW 607



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 89/346 (25%), Positives = 155/346 (44%), Gaps = 25/346 (7%)

Query: 239 NTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI-- 296
             L+    + G+H +AL+V  R+      P +   N+++ G  +  R     +LF ++  
Sbjct: 97  GVLVIALSQMGLHDDALSVFCRLP---TLPALPACNAILDGLVKARRFDRVWKLFDEMLS 153

Query: 297 KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRD 356
           +G  P+ VTY TL++      D+ +A  +   M A+ + P VVTY++++  LC+EG + +
Sbjct: 154 RGMVPSLVTYNTLVNACRHEGDMTKAWEVWNQMVARRIDPNVVTYSTMICVLCEEGCVIE 213

Query: 357 ANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIH 416
           A RL   M E  + P+  T N L++++CK       + +   +L++GL+ +      LI 
Sbjct: 214 AERLFIMMKETGVQPNLYTYNALMSSHCKRDGVNRTLTLYQELLKSGLVPNAVIITTLIG 273

Query: 417 GFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCV 476
           GF  A  +   K     M   G +P+   Y+ L+DG       +  L +  +    GLC 
Sbjct: 274 GFFLANRISDVKNAFLEMHRYGIAPTVPVYNSLIDGAFRSGYAQEALTVYQDMTRVGLCP 333

Query: 477 DVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG--------- 527
           D      ++R  C   +V  A R   LMQ +GI  ++  Y +L   + + G         
Sbjct: 334 DEFTCSIIVRGLCCGGQVQVATRFLELMQQSGINLNAAAYNALIDEHCKDGNLAEALATC 393

Query: 528 --------EPKAC--SDILDDMYRRRLM-ITLKIYRSFSASYAKDN 562
                   EP     S ++D   ++R M I + IY    A   + N
Sbjct: 394 TRMNEVGIEPNVVTYSSLIDGHSKKRKMEIAMGIYMEMVAKGVEPN 439


>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
           Group]
          Length = 878

 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 114/386 (29%), Positives = 191/386 (49%), Gaps = 4/386 (1%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           ++L+ +V+    PD   HV + L+  YA  +     + VF +MR H L P++     +++
Sbjct: 362 ALLDLMVRNGIQPD--HHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVID 419

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
            L K    D     +++M+  G+  NI +Y  LIH  C     DK E+L+ EM  + +  
Sbjct: 420 VLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICL 479

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           +   +N++I  +CK+G   E+  + D M R G+ PDI+TYN+LI G C  G+M EA +L 
Sbjct: 480 NTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLL 539

Query: 294 RDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
             +   G  P+ VTY TLI+GYCR + +++AL L + M + GV P ++TYN IL+ L   
Sbjct: 540 ASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHT 599

Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
            R   A  L   + +     +  T N +++  CK   T  A+++   +    L L+  T+
Sbjct: 600 RRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTF 659

Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
             +I    K   MD AK+L       G  P   +YS + +    + + E L  L      
Sbjct: 660 NIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEE 719

Query: 472 RGLCVDVSVYRALIRRFCKKEKVDYA 497
            G   D  +  +++R+  ++  +  A
Sbjct: 720 NGCSADSRMLNSIVRKLLQRGDITRA 745



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 115/417 (27%), Positives = 194/417 (46%), Gaps = 10/417 (2%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG---VVANIHLY 203
           +D   VFD++        ++     L  +A+      V + Y +M + G   V   +H Y
Sbjct: 37  EDARHVFDELLRRGRGASIYGLNRALADVARHSPAAAVSR-YNRMARAGAGKVTPTVHTY 95

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL-AVQDRME 262
            +LI  CC++  +D     L  +  K  R D  T+  L+   C      +A+  V  RM 
Sbjct: 96  AILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMT 155

Query: 263 REGISPDIVTYNSLIHGFCREGRMREARRLFRDIK-----GATPNHVTYTTLIDGYCRAN 317
             G  PD+ +YN+L+ G C E R +EA  L   +      G+ P+ V+Y T+++G+ +  
Sbjct: 156 ELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEG 215

Query: 318 DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCN 377
           D ++A      M  +G+ P VVTY+SI+  LCK   +  A  +LN M +  + PD +T N
Sbjct: 216 DSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYN 275

Query: 378 TLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA 437
           ++++ YC  G    A+    +M   G+  +  TY +L++  CK      A+++   M   
Sbjct: 276 SILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKR 335

Query: 438 GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYA 497
           G  P   +Y  L+ GY  K     +  LLD  V  G+  D  V+  LI  + K+EKVD A
Sbjct: 336 GLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQA 395

Query: 498 QRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSF 554
             +F+ M+ +G+  + V Y ++     ++G         + M    L   + +Y S 
Sbjct: 396 MLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSL 452



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 107/390 (27%), Positives = 192/390 (49%), Gaps = 4/390 (1%)

Query: 115 VLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNS 174
           VLN +VK    PD  ++  + ++  Y +    ++ +    +MR   + P++   + L+N 
Sbjct: 258 VLNTMVKNGVMPDCMTY--NSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNY 315

Query: 175 LAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRAD 234
           L K+  +    K++  M + G+  +I  Y  L+        + ++  LL  M    ++ D
Sbjct: 316 LCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPD 375

Query: 235 LFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR 294
              +N LI  Y K+    +A+ V  +M + G++P++V Y ++I   C+ G + +A   F 
Sbjct: 376 HHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFE 435

Query: 295 DI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEG 352
            +  +G TPN + YT+LI G C  +  ++A  L   M  +G+    + +NSI+   CKEG
Sbjct: 436 QMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEG 495

Query: 353 RIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYK 412
           R+ ++ +L + M    + PD +T NTLI+  C  G    A K+   M+  G+  D  TY 
Sbjct: 496 RVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYG 555

Query: 413 ALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSR 472
            LI+G+C+   MD A  L   M+ +G SP+  +Y+ ++ G  +     A  +L       
Sbjct: 556 TLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKS 615

Query: 473 GLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
           G  +++S Y  ++   CK    D A R+F 
Sbjct: 616 GTQLELSTYNIILHGLCKNNLTDEALRMFQ 645



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 106/393 (26%), Positives = 193/393 (49%), Gaps = 8/393 (2%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLA-KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           ++FD M    L P +     LL   A K  L +M   +   MV+ G+  + H++N+LI A
Sbjct: 327 KIFDSMTKRGLEPDIATYRTLLQGYATKGALVEM-HALLDLMVRNGIQPDHHVFNILICA 385

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
             K   VD+   +  +M    +  ++  Y T+I + CK G   +A+   ++M  EG++P+
Sbjct: 386 YAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPN 445

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLRE 327
           I+ Y SLIHG C   +  +A  L  ++  +G   N + + ++ID +C+   + E+ +L +
Sbjct: 446 IIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFD 505

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
           +M   GV P ++TYN+++   C  G++ +A +LL  M    + PD VT  TLIN YC++ 
Sbjct: 506 LMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVS 565

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
               A+ +   M+ +G+  +  TY  ++ G    +    AKEL   +  +G      +Y+
Sbjct: 566 RMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYN 625

Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGN 507
            ++ G C  N  +  L++        L ++   +  +I    K  ++D A+ LF     N
Sbjct: 626 IILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSAN 685

Query: 508 GILGDSVIYTSLAYAYWRAGEPKACSDILDDMY 540
           G++ D   Y+ +A      G  +     LDD++
Sbjct: 686 GLVPDVRTYSLMAENLIEQGSLEE----LDDLF 714



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 101/379 (26%), Positives = 187/379 (49%), Gaps = 6/379 (1%)

Query: 169 TVLLNSLAKD-RLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC---KSSDVDKVEKLLC 224
           T LL  L  D R +D +  V ++M +LG + ++  YN L+   C   +S +  ++  ++ 
Sbjct: 131 TPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMA 190

Query: 225 EMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREG 284
           +        D+ +YNT++  + K+G   +A +    M   GI PD+VTY+S+I   C+  
Sbjct: 191 DDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQ 250

Query: 285 RMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYN 342
            M +A  +   +   G  P+ +TY +++ GYC +   +EA+   + M + GV P VVTY+
Sbjct: 251 AMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYS 310

Query: 343 SILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEA 402
           S++  LCK GR  +A ++ + M ++ + PD  T  TL+  Y   G       + + M+  
Sbjct: 311 SLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRN 370

Query: 403 GLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEAL 462
           G+  D   +  LI  + K +++D A  +   M   G +P+   Y  ++D  C   + +  
Sbjct: 371 GIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDA 430

Query: 463 LKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYA 522
           +   ++ +  GL  ++ VY +LI   C  +K D A+ L   M   GI  +++ + S+  +
Sbjct: 431 MLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDS 490

Query: 523 YWRAGEPKACSDILDDMYR 541
           + + G       + D M R
Sbjct: 491 HCKEGRVIESEKLFDLMVR 509



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 103/412 (25%), Positives = 194/412 (47%), Gaps = 6/412 (1%)

Query: 161 LMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDV-DKV 219
           + P +H   +L+    +    D+ +     +V+ G   +   +  L+   C      D +
Sbjct: 88  VTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAM 147

Query: 220 EKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMERE---GISPDIVTYNSL 276
           + +L  M       D+F+YN L+   C +    EAL +   M  +   G  PD+V+YN++
Sbjct: 148 DIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTV 207

Query: 277 IHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGV 334
           ++GF +EG   +A   + ++  +G  P+ VTY+++I   C+A  +++A+ +   M   GV
Sbjct: 208 LNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGV 267

Query: 335 YPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMK 394
            P  +TYNSIL   C  G+ ++A   L +M    + P+ VT ++L+N  CK G +  A K
Sbjct: 268 MPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARK 327

Query: 395 VKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYC 454
           + + M + GL  D  TY+ L+ G+     +     LL  M+  G  P +  ++ L+  Y 
Sbjct: 328 IFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYA 387

Query: 455 NKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSV 514
            +   +  + +  +    GL  +V  Y  +I   CK   VD A   F  M   G+  + +
Sbjct: 388 KQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNII 447

Query: 515 IYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
           +YTSL +      +     +++ +M  R + +    + S   S+ K+  +++
Sbjct: 448 VYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIE 499



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 72/269 (26%), Positives = 110/269 (40%), Gaps = 72/269 (26%)

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
           K++  MV++GV  +I  YN LI  CC +  +D+  KLL  M    V+ D+ TY TLI  Y
Sbjct: 502 KLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGY 561

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNH 303
           C+     +ALA+   M   G+SP+I+TYN ++ G     R   A+ L+  I   G     
Sbjct: 562 CRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLEL 621

Query: 304 VTYTTLIDGYCRANDLEEALRLREVM---------------------------------- 329
            TY  ++ G C+ N  +EALR+ + +                                  
Sbjct: 622 STYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAA 681

Query: 330 -AAKGVYPGVVTY-----------------------------------NSILRKLCKEGR 353
            +A G+ P V TY                                   NSI+RKL + G 
Sbjct: 682 HSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGD 741

Query: 354 IRDANRLLNEMNEKKIAPDNVTCNTLINA 382
           I  A   L  ++EK  + +  T + L+ +
Sbjct: 742 ITRAGTYLFMIDEKHFSLEASTASFLLES 770


>gi|18087893|gb|AAL59047.1|AC087182_30 putative membrane-associated salt-inducible protein,3'-partial
           [Oryza sativa Japonica Group]
          Length = 571

 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 112/383 (29%), Positives = 190/383 (49%), Gaps = 7/383 (1%)

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
           P   +   LL  L   +  D+  K ++  ++  V  +I+ +N +I   C+   + K   +
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 223 LCEMEFKDVRADLFTYNTLIALYCKKG----MHYEALAVQDRMEREGISPDIVTYNSLIH 278
             +++   +   + TYN+LI  YCKKG    M++  + +++ +E  GISP  VT+  LI+
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVE-AGISPTAVTFGVLIN 272

Query: 279 GFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYP 336
           G+C+      A R+F ++K  G   + VTY +LI G C    +EE ++L E M   G+ P
Sbjct: 273 GYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSP 332

Query: 337 GVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVK 396
             +T+  +L+  CK+G + DAN  ++ M E+ + PD V  N LI+ Y ++G    AM VK
Sbjct: 333 NEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVK 392

Query: 397 NRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNK 456
             M + G+  +  TY  LI GF ++ +   A  LL  M + G      +Y+ L+   C K
Sbjct: 393 EAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCK 452

Query: 457 NNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIY 516
                 +KLLDE    GL  +   Y  +I+ FC K  +  A  +   M+      + V Y
Sbjct: 453 GEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTY 512

Query: 517 TSLAYAYWRAGEPKACSDILDDM 539
                 + + G+    +D+L++M
Sbjct: 513 NVFIKYFCQIGKMDEANDLLNEM 535



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 102/308 (33%), Positives = 162/308 (52%), Gaps = 2/308 (0%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           +  +M    + P      VL+N   K+  T    +V+++M Q G+ A++  YN LI   C
Sbjct: 251 LLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLC 310

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
               V++  KL+ EME   +  +  T+  ++  +CKKGM  +A    D M    + PD+V
Sbjct: 311 SEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVV 370

Query: 272 TYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
            YN LI  + R G+M +A  +   +  KG +PN  TY  LI G+ R+ D   A  L + M
Sbjct: 371 IYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEM 430

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
             KG+   VVTYN ++  LC +G +R A +LL+EM+E  + P+++T NT+I  +C  G+ 
Sbjct: 431 KEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNI 490

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
            SA +++ RM +     +  TY   I  FC+  +MD A +LL  MLD    P+  +Y  +
Sbjct: 491 KSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETI 550

Query: 450 VDGYCNKN 457
            +G   K 
Sbjct: 551 KEGMMEKG 558



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 109/390 (27%), Positives = 196/390 (50%), Gaps = 9/390 (2%)

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER 263
           N L+     +  VD  EK       + V  D++T+NT+I+  C+ G   +A  V   ++ 
Sbjct: 160 NALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKA 219

Query: 264 EGISPDIVTYNSLIHGFCREG---RMREARRLFRDI--KGATPNHVTYTTLIDGYCRAND 318
            G++P + TYNSLI G+C++G    M     L +++   G +P  VT+  LI+GYC+ ++
Sbjct: 220 WGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSN 279

Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT 378
              A+R+ E M  +G+   VVTYNS++  LC EG++ +  +L+ EM +  ++P+ +T   
Sbjct: 280 TAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGC 339

Query: 379 LINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAG 438
           ++  +CK G  A A    + M E  +  D   Y  LI  + +  +M+ A  +   M   G
Sbjct: 340 VLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKG 399

Query: 439 FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQ 498
            SP+  +Y+ L+ G+    +  +   LLDE   +G+  DV  Y  LI   C K +V  A 
Sbjct: 400 ISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAV 459

Query: 499 RLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDI---LDDMYRRRLMITLKIYRSFS 555
           +L + M   G+  + + Y ++   +   G  K+  +I   ++   +R  ++T  ++  + 
Sbjct: 460 KLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYF 519

Query: 556 ASYAKDNEILDLFWSHVVDRGLMSKHIFKE 585
               K +E  DL  + ++D+ L+   I  E
Sbjct: 520 CQIGKMDEANDLL-NEMLDKCLVPNGITYE 548



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 94/298 (31%), Positives = 155/298 (52%), Gaps = 2/298 (0%)

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
           K+MV+ G+      + VLI+  CK+S+     ++  EM+ + + A + TYN+LI+  C +
Sbjct: 253 KEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSE 312

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTY 306
           G   E + + + ME  G+SP+ +T+  ++ GFC++G M +A      +  +   P+ V Y
Sbjct: 313 GKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIY 372

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
             LID Y R   +E+A+ ++E MA KG+ P V TYN ++    + G  R A+ LL+EM E
Sbjct: 373 NILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKE 432

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
           K I  D VT N LI A C  G+   A+K+ + M E GL  +  TY  +I GFC    +  
Sbjct: 433 KGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKS 492

Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRAL 484
           A E+   M       +  +Y+  +  +C     +    LL+E + + L  +   Y  +
Sbjct: 493 AYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETI 550



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 65/266 (24%), Positives = 122/266 (45%), Gaps = 3/266 (1%)

Query: 301 PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRL 360
           P+  +   L+ G   A  ++ A +       + V P + T+N+++  LC+ G++R A  +
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 361 LNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVK---NRMLEAGLMLDQFTYKALIHG 417
             ++    +AP   T N+LI+ YCK G   +   V      M+EAG+     T+  LI+G
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273

Query: 418 FCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVD 477
           +CK      A  +   M   G + S  +Y+ L+ G C++   E  +KL++E    GL  +
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPN 333

Query: 478 VSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILD 537
              +  +++ FCKK  +  A    + M    +  D VIY  L   Y R G+ +    + +
Sbjct: 334 EITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKE 393

Query: 538 DMYRRRLMITLKIYRSFSASYAKDNE 563
            M ++ +   +  Y      +++  +
Sbjct: 394 AMAKKGISPNVTTYNCLITGFSRSGD 419



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 82/335 (24%), Positives = 144/335 (42%), Gaps = 22/335 (6%)

Query: 25  HWAKLLNPNIASSLTSTAI-HKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWT 83
           H   LL   + + ++ TA+   VL+N Y  C   + + A   + E        S+ ++ +
Sbjct: 247 HVDMLLKEMVEAGISPTAVTFGVLINGY--CKNSNTAAAVRVFEEMKQQGIAASVVTYNS 304

Query: 84  MIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANL 143
           +I  L      +    ++E+  + D   +P               N      ++  +   
Sbjct: 305 LISGLCSEGKVEEGVKLMEE--MEDLGLSP---------------NEITFGCVLKGFCKK 347

Query: 144 KMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLY 203
            M  D     D M   N+ P +    +L++   +    +    V + M + G+  N+  Y
Sbjct: 348 GMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTY 407

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER 263
           N LI    +S D      LL EM+ K + AD+ TYN LI   C KG   +A+ + D M  
Sbjct: 408 NCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSE 467

Query: 264 EGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGA--TPNHVTYTTLIDGYCRANDLEE 321
            G+ P+ +TYN++I GFC +G ++ A  +   ++      N VTY   I  +C+   ++E
Sbjct: 468 VGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDE 527

Query: 322 ALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRD 356
           A  L   M  K + P  +TY +I   + ++G   D
Sbjct: 528 ANDLLNEMLDKCLVPNGITYETIKEGMMEKGYTPD 562



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/139 (23%), Positives = 63/139 (45%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           + D+M+   +   +    VL+ +L          K+  +M ++G+  N   YN +I   C
Sbjct: 426 LLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFC 485

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
              ++    ++   ME    RA++ TYN  I  +C+ G   EA  + + M  + + P+ +
Sbjct: 486 DKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGI 545

Query: 272 TYNSLIHGFCREGRMREAR 290
           TY ++  G   +G   + R
Sbjct: 546 TYETIKEGMMEKGYTPDIR 564


>gi|242095336|ref|XP_002438158.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
 gi|241916381|gb|EER89525.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
          Length = 607

 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 119/407 (29%), Positives = 189/407 (46%), Gaps = 20/407 (4%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG--VVANIHLYNVLIH 208
           ++F  MR  ++ P +    +LLN L K  L     KV  +M   G  V A+I + N ++ 
Sbjct: 152 ELFTSMREASVKPDIVTYGILLNRLCKAGLVGDALKVLDRMSSPGSDVCADIVILNTVVD 211

Query: 209 ACCKSSDVDKVEKLLCEMEFKDVR--------ADLFTYNTLIALYCKKGMHYEALAVQDR 260
             CK      + +L   + F D R         +  TYN L    C+ G    A  + +R
Sbjct: 212 GLCK------IGRLQDAIVFVDERMRQVHGCAPNTVTYNCLADACCRVGDIDMACQIVER 265

Query: 261 MEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKG----ATPNHVTYTTLIDGYCRA 316
           ME+EG++P+++T N+++ G CR GR+  A   FR+ +     A  N VTY+TL+  +   
Sbjct: 266 MEKEGVTPNVITMNTIVGGLCRVGRVGAALDFFREKRTTWLEARGNAVTYSTLVSAFLHC 325

Query: 317 NDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTC 376
           N++  A+ L   MA +G  P  V Y +++  L + GR+ DA  +   M +     D    
Sbjct: 326 NNVALAMELFHEMADQGYPPDAVMYFTMISGLTQAGRLVDACNIAASMKKAGFKLDRKAY 385

Query: 377 NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD 436
           N LI  +C+      A ++   M  AGL  D +TY  L+   CKA +     ELL  M+D
Sbjct: 386 NILIGGFCRKKRLHEAHQLFEEMKGAGLQPDVYTYNTLLSCLCKAGDFSAVDELLGNMID 445

Query: 437 AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDY 496
            G  PS  ++  LV GYC     +  LK+        +  +  +Y  LI   CK  +VD 
Sbjct: 446 DGCQPSVVTFGTLVHGYCKAGKTDEALKIFRSMGEARIQPNTVIYNTLIDFLCKSREVDV 505

Query: 497 AQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRR 543
           A +LF+ M+ N +  +   Y +L         P+   +++D M   R
Sbjct: 506 AIKLFDEMRENNVPANVTTYNALLKGLQDKNMPEKAFELMDQMKEER 552



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 110/399 (27%), Positives = 179/399 (44%), Gaps = 43/399 (10%)

Query: 199 NIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQ 258
           ++  +N L+ A  ++ ++  + +L   M    V+ D+ TY  L+   CK G+  +AL V 
Sbjct: 130 DVSTFNSLLSALGRAGNLRGMTELFTSMREASVKPDIVTYGILLNRLCKAGLVGDALKVL 189

Query: 259 DRMEREG--ISPDIVTYNSLIHGFCREGRMREA----RRLFRDIKGATPNHVTYTTLIDG 312
           DRM   G  +  DIV  N+++ G C+ GR+++A        R + G  PN VTY  L D 
Sbjct: 190 DRMSSPGSDVCADIVILNTVVDGLCKIGRLQDAIVFVDERMRQVHGCAPNTVTYNCLADA 249

Query: 313 YCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRI-------RD--------- 356
            CR  D++ A ++ E M  +GV P V+T N+I+  LC+ GR+       R+         
Sbjct: 250 CCRVGDIDMACQIVERMEKEGVTPNVITMNTIVGGLCRVGRVGAALDFFREKRTTWLEAR 309

Query: 357 ---------------------ANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKV 395
                                A  L +EM ++   PD V   T+I+   + G    A  +
Sbjct: 310 GNAVTYSTLVSAFLHCNNVALAMELFHEMADQGYPPDAVMYFTMISGLTQAGRLVDACNI 369

Query: 396 KNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCN 455
              M +AG  LD+  Y  LI GFC+ K +  A +L   M  AG  P   +Y+ L+   C 
Sbjct: 370 AASMKKAGFKLDRKAYNILIGGFCRKKRLHEAHQLFEEMKGAGLQPDVYTYNTLLSCLCK 429

Query: 456 KNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVI 515
             +  A+ +LL   +  G    V  +  L+  +CK  K D A ++F  M    I  ++VI
Sbjct: 430 AGDFSAVDELLGNMIDDGCQPSVVTFGTLVHGYCKAGKTDEALKIFRSMGEARIQPNTVI 489

Query: 516 YTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSF 554
           Y +L     ++ E      + D+M    +   +  Y + 
Sbjct: 490 YNTLIDFLCKSREVDVAIKLFDEMRENNVPANVTTYNAL 528



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 85/305 (27%), Positives = 142/305 (46%), Gaps = 4/305 (1%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY--KKMVQLGVVANIHLYNVLIH 208
           Q+ ++M    + P++     ++  L +          +  K+   L    N   Y+ L+ 
Sbjct: 261 QIVERMEKEGVTPNVITMNTIVGGLCRVGRVGAALDFFREKRTTWLEARGNAVTYSTLVS 320

Query: 209 ACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISP 268
           A    ++V    +L  EM  +    D   Y T+I+   + G   +A  +   M++ G   
Sbjct: 321 AFLHCNNVALAMELFHEMADQGYPPDAVMYFTMISGLTQAGRLVDACNIAASMKKAGFKL 380

Query: 269 DIVTYNSLIHGFCREGRMREARRLFRDIKGA--TPNHVTYTTLIDGYCRANDLEEALRLR 326
           D   YN LI GFCR+ R+ EA +LF ++KGA   P+  TY TL+   C+A D      L 
Sbjct: 381 DRKAYNILIGGFCRKKRLHEAHQLFEEMKGAGLQPDVYTYNTLLSCLCKAGDFSAVDELL 440

Query: 327 EVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKI 386
             M   G  P VVT+ +++   CK G+  +A ++   M E +I P+ V  NTLI+  CK 
Sbjct: 441 GNMIDDGCQPSVVTFGTLVHGYCKAGKTDEALKIFRSMGEARIQPNTVIYNTLIDFLCKS 500

Query: 387 GDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSY 446
            +   A+K+ + M E  +  +  TY AL+ G       + A EL+  M +   +P Y + 
Sbjct: 501 REVDVAIKLFDEMRENNVPANVTTYNALLKGLQDKNMPEKAFELMDQMKEERCTPDYVTM 560

Query: 447 SWLVD 451
             L++
Sbjct: 561 DVLME 565



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 81/178 (45%), Gaps = 2/178 (1%)

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           L+  +   K   +  Q+F++M+   L P ++    LL+ L K      V ++   M+  G
Sbjct: 388 LIGGFCRKKRLHEAHQLFEEMKGAGLQPDVYTYNTLLSCLCKAGDFSAVDELLGNMIDDG 447

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
              ++  +  L+H  CK+   D+  K+   M    ++ +   YNTLI   CK      A+
Sbjct: 448 CQPSVVTFGTLVHGYCKAGKTDEALKIFRSMGEARIQPNTVIYNTLIDFLCKSREVDVAI 507

Query: 256 AVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKG--ATPNHVTYTTLID 311
            + D M    +  ++ TYN+L+ G   +    +A  L   +K    TP++VT   L++
Sbjct: 508 KLFDEMRENNVPANVTTYNALLKGLQDKNMPEKAFELMDQMKEERCTPDYVTMDVLME 565


>gi|224114285|ref|XP_002316718.1| predicted protein [Populus trichocarpa]
 gi|222859783|gb|EEE97330.1| predicted protein [Populus trichocarpa]
          Length = 684

 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 118/508 (23%), Positives = 233/508 (45%), Gaps = 20/508 (3%)

Query: 63  FFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKI 122
           FF W++     Y+H    +  M+ +L+K K  + A+ +L  +  R    TP         
Sbjct: 69  FFFWSDRQW-RYRHDPIVYCVMLDVLSKTKLCQGARRVLRLMVRRGIQRTP--------- 118

Query: 123 HDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTD 182
                        +++ Y+     ++ +QV   M+   + P+L  C   ++ L    + +
Sbjct: 119 --------QDFCCVMVSYSRAGKLRNAMQVLTMMQKAGIEPNLLVCNTAIHVLVMANMLE 170

Query: 183 MVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLI 242
              +  ++M  LG++ N+  YN LI   C    V+   +L+ EM  K    D  +Y T++
Sbjct: 171 KALRFLERMQLLGIMPNVVTYNCLIKGYCDLHRVEDAMELISEMPLKGCSPDKVSYYTVM 230

Query: 243 ALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGAT 300
              CK     E + V ++ME   +  D VTYN+LIH  C+     EA +  R+   +G  
Sbjct: 231 GFLCKNRRIREVMDVIEKMEDTKLLADQVTYNTLIHMLCKHQHADEALQFLREAQKRGFQ 290

Query: 301 PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRL 360
            + V Y+ ++D YC+   +++A  +   M  +G  P VVTY +I+    + G +  A ++
Sbjct: 291 VDKVGYSAIVDSYCKEGRMDQAKEIVNEMFTRGCIPDVVTYTAIINGFSQAGEVGQARKM 350

Query: 361 LNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCK 420
           L +M +    P+ V+    +   C+ G+++ A ++     E     +  TY  ++HGF +
Sbjct: 351 LQQMYKHGCKPNTVSYTAFLKGLCQKGNSSEAREMMKASEEQWWTPNAITYSVVMHGFRR 410

Query: 421 AKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSV 480
             ++  A +++  M+  GF P+    + L+   C     +   K ++E ++ G  V+   
Sbjct: 411 EGKLSDACDVVREMIGKGFFPTPVEINLLLQSLCRIGRVDEAKKFMEECLNMGCAVNAVN 470

Query: 481 YRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMY 540
           +  +I RFC+++ ++ A  L + M  +    D+V YT++  A  + G  +  +++   M 
Sbjct: 471 FTTVIHRFCQQDDIEAALSLLDDMYLSNKHPDAVTYTTIIDALGKKGRIEEATELTLKML 530

Query: 541 RRRLMITLKIYRSFSASYAKDNEILDLF 568
           ++ +  T   YR+    Y +   + DL 
Sbjct: 531 KKGIDPTPVTYRTVIHRYGQIGRVEDLL 558



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 131/544 (24%), Positives = 232/544 (42%), Gaps = 58/544 (10%)

Query: 83  TMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYAN 142
           T IH+L      + A   LE++ L   +      N L+K                  Y +
Sbjct: 158 TAIHVLVMANMLEKALRFLERMQLLGIMPNVVTYNCLIK-----------------GYCD 200

Query: 143 LKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHL 202
           L   +D +++  +M +    P   +   ++  L K+R    V  V +KM    ++A+   
Sbjct: 201 LHRVEDAMELISEMPLKGCSPDKVSYYTVMGFLCKNRRIREVMDVIEKMEDTKLLADQVT 260

Query: 203 YNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRME 262
           YN LIH  CK    D+  + L E + +  + D   Y+ ++  YCK+G   +A  + + M 
Sbjct: 261 YNTLIHMLCKHQHADEALQFLREAQKRGFQVDKVGYSAIVDSYCKEGRMDQAKEIVNEMF 320

Query: 263 REGISPDIVTYNSLIHGFCREGRMREARRLFRD----------------IKGA------- 299
             G  PD+VTY ++I+GF + G + +AR++ +                 +KG        
Sbjct: 321 TRGCIPDVVTYTAIINGFSQAGEVGQARKMLQQMYKHGCKPNTVSYTAFLKGLCQKGNSS 380

Query: 300 --------------TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSIL 345
                         TPN +TY+ ++ G+ R   L +A  +   M  KG +P  V  N +L
Sbjct: 381 EAREMMKASEEQWWTPNAITYSVVMHGFRREGKLSDACDVVREMIGKGFFPTPVEINLLL 440

Query: 346 RKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLM 405
           + LC+ GR+ +A + + E      A + V   T+I+ +C+  D  +A+ + + M  +   
Sbjct: 441 QSLCRIGRVDEAKKFMEECLNMGCAVNAVNFTTVIHRFCQQDDIEAALSLLDDMYLSNKH 500

Query: 406 LDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKL 465
            D  TY  +I    K   ++ A EL   ML  G  P+  +Y  ++  Y      E LL L
Sbjct: 501 PDAVTYTTIIDALGKKGRIEEATELTLKMLKKGIDPTPVTYRTVIHRYGQIGRVEDLLNL 560

Query: 466 LDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWR 525
           LD+ ++R  C   + +  +I + C    ++ A +L   +       D+     L  +Y R
Sbjct: 561 LDKMLTRQEC--RTAFNQVIEKLCTFGNLEAADKLLGKVLRTASRIDANTCHVLMESYLR 618

Query: 526 AGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKD--NEILDLFWSHVVDRGLMSKHIF 583
            G P +   +   M+ R L+  LK+         ++  +E  D  +   V+RG +S H  
Sbjct: 619 KGIPLSAYKVACRMFSRSLIPDLKLCEKVCKKLMQEGKSEEADNLFLRFVERGNISSHCL 678

Query: 584 KEMQ 587
           +  Q
Sbjct: 679 RHSQ 682


>gi|15221540|ref|NP_172145.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75205637|sp|Q9SHK2.1|PPR17_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g06580
 gi|6692678|gb|AAF24812.1|AC007592_5 F12K11.8 [Arabidopsis thaliana]
 gi|332189887|gb|AEE28008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 500

 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 115/395 (29%), Positives = 192/395 (48%), Gaps = 2/395 (0%)

Query: 133 LSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMV 192
            S L+I  A L   +  + +F  + +  +   L++ T L++   +     +      KM+
Sbjct: 82  FSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMM 141

Query: 193 QLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHY 252
           +LG   +I  +  L++  C  +   +   L+ ++       ++  YNT+I   C+KG   
Sbjct: 142 KLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVN 201

Query: 253 EALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLI 310
            AL V   M++ GI PD+VTYNSLI      G    + R+  D+   G +P+ +T++ LI
Sbjct: 202 TALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALI 261

Query: 311 DGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIA 370
           D Y +   L EA +    M  + V P +VTYNS++  LC  G + +A ++LN +  K   
Sbjct: 262 DVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFF 321

Query: 371 PDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL 430
           P+ VT NTLIN YCK       MK+   M   G+  D FTY  L  G+C+A +   A+++
Sbjct: 322 PNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKV 381

Query: 431 LFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCK 490
           L  M+  G  P   +++ L+DG C+       L  L++       V +  Y  +I+  CK
Sbjct: 382 LGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCK 441

Query: 491 KEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWR 525
            +KV+ A  LF  +   G+  D + Y ++     R
Sbjct: 442 ADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRR 476



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 104/379 (27%), Positives = 180/379 (47%), Gaps = 19/379 (5%)

Query: 76  HSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSW 135
           H L S  T+I    +      A + L K+    F  +     +LV      +G  HV   
Sbjct: 112 HDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLV------NGFCHVNR- 164

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
              FY       + + + DQ+      P++     +++SL +    +    V K M ++G
Sbjct: 165 ---FY-------EAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMG 214

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
           +  ++  YN LI     S       ++L +M    +  D+ T++ LI +Y K+G   EA 
Sbjct: 215 IRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAK 274

Query: 256 AVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGY 313
              + M +  ++P+IVTYNSLI+G C  G + EA+++   +  KG  PN VTY TLI+GY
Sbjct: 275 KQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGY 334

Query: 314 CRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDN 373
           C+A  +++ +++  VM+  GV     TYN++ +  C+ G+   A ++L  M    + PD 
Sbjct: 335 CKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDM 394

Query: 374 VTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFG 433
            T N L++  C  G    A+     + ++  ++   TY  +I G CKA +++ A  L   
Sbjct: 395 YTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCS 454

Query: 434 MLDAGFSPSYCSYSWLVDG 452
           +   G SP   +Y  ++ G
Sbjct: 455 LALKGVSPDVITYITMMIG 473



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 90/320 (28%), Positives = 160/320 (50%), Gaps = 2/320 (0%)

Query: 222 LLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFC 281
           L C+M        +  ++ L+    K   +   +++   +E  GIS D+ ++ +LI  FC
Sbjct: 66  LFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFC 125

Query: 282 REGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVV 339
           R  R+  A      +   G  P+ VT+ +L++G+C  N   EA+ L + +   G  P VV
Sbjct: 126 RCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVV 185

Query: 340 TYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRM 399
            YN+I+  LC++G++  A  +L  M +  I PD VT N+LI      G    + ++ + M
Sbjct: 186 IYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDM 245

Query: 400 LEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNE 459
           +  G+  D  T+ ALI  + K  ++  AK+    M+    +P+  +Y+ L++G C     
Sbjct: 246 MRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLL 305

Query: 460 EALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
           +   K+L+  VS+G   +   Y  LI  +CK ++VD   ++  +M  +G+ GD+  Y +L
Sbjct: 306 DEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTL 365

Query: 520 AYAYWRAGEPKACSDILDDM 539
              Y +AG+  A   +L  M
Sbjct: 366 YQGYCQAGKFSAAEKVLGRM 385



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 78/258 (30%), Positives = 129/258 (50%), Gaps = 4/258 (1%)

Query: 112 TPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVL 171
           +  +L+ ++++   PD      S L+  Y       +  + +++M   ++ P++     L
Sbjct: 238 SARILSDMMRMGISPD--VITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSL 295

Query: 172 LNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDV 231
           +N L    L D   KV   +V  G   N   YN LI+  CK+  VD   K+LC M    V
Sbjct: 296 INGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGV 355

Query: 232 RADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARR 291
             D FTYNTL   YC+ G    A  V  RM   G+ PD+ T+N L+ G C  G++ +A  
Sbjct: 356 DGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALV 415

Query: 292 LFRDIKGATP--NHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLC 349
              D++ +      +TY  +I G C+A+ +E+A  L   +A KGV P V+TY +++  L 
Sbjct: 416 RLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLR 475

Query: 350 KEGRIRDANRLLNEMNEK 367
           ++   R+A+ L  +M ++
Sbjct: 476 RKRLWREAHELYRKMQKE 493



 Score = 92.0 bits (227), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 65/250 (26%), Positives = 112/250 (44%), Gaps = 2/250 (0%)

Query: 317 NDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTC 376
            +L  AL LR  +     + G   Y   LR      +  DA  L  +M E    P  V  
Sbjct: 25  GNLVTALSLR--ICNSRAFSGRSDYRERLRSGLHSIKFNDALTLFCDMAESHPLPSIVDF 82

Query: 377 NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD 436
           + L+ A  K+    + + +   +   G+  D +++  LI  FC+   + +A   L  M+ 
Sbjct: 83  SRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMK 142

Query: 437 AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDY 496
            GF PS  ++  LV+G+C+ N     + L+D+ V  G   +V +Y  +I   C+K +V+ 
Sbjct: 143 LGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNT 202

Query: 497 AQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSA 556
           A  +   M+  GI  D V Y SL    + +G     + IL DM R  +   +  + +   
Sbjct: 203 ALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALID 262

Query: 557 SYAKDNEILD 566
            Y K+ ++L+
Sbjct: 263 VYGKEGQLLE 272



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 53/236 (22%), Positives = 100/236 (42%)

Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT 378
             +AL L   MA     P +V ++ +L  + K  +      L   +    I+ D  +  T
Sbjct: 60  FNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTT 119

Query: 379 LINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAG 438
           LI+ +C+    + A+    +M++ G      T+ +L++GFC       A  L+  ++  G
Sbjct: 120 LIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLG 179

Query: 439 FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQ 498
           + P+   Y+ ++D  C K      L +L      G+  DV  Y +LI R         + 
Sbjct: 180 YEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSA 239

Query: 499 RLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSF 554
           R+ + M   GI  D + +++L   Y + G+        ++M +R +   +  Y S 
Sbjct: 240 RILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSL 295


>gi|302816960|ref|XP_002990157.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
 gi|300142012|gb|EFJ08717.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
          Length = 760

 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 122/420 (29%), Positives = 213/420 (50%), Gaps = 10/420 (2%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N  V S L+  Y         +++F+ M+V    P+L     ++++ +K        +++
Sbjct: 155 NVFVYSSLICAYGRSGKLAKAVEIFEAMKV-VCKPNLVVYNAVIDACSKGGDYPTALRIF 213

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
           ++M++ G+  +   +N LI A  +++  ++ +++  EME + +  D  TYNTLIA YC+ 
Sbjct: 214 REMLEQGMSPDRITFNTLISAAGRANRWEECDRIFAEMEERGIARDDVTYNTLIATYCRG 273

Query: 249 G-MHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGAT--PNHVT 305
           G MH  A  ++   +  GI P ++TY+++I G+ + G   EA  LF++++     P+ + 
Sbjct: 274 GQMHLGAALMETMAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALFQEMRNQNVEPDGIC 333

Query: 306 YTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMN 365
           Y T++D + R  + +EA  +R  M   G    +VTYN++L    K+G+ R+A  LL EM 
Sbjct: 334 YNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMK 393

Query: 366 EKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMD 425
           ++  +P+ +T + LI+AYCK G    AM +   + +AGL  D   Y  L+ G CK    D
Sbjct: 394 QRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPD 453

Query: 426 IAKELLFGMLDAGFSPSYCSYSWLVDGYCN-----KNNEEALLKLLDEFVSRGLCVDVSV 480
            A  LL  M D G  P+  +Y+ L+D Y       + N   L   L   V+  L   V  
Sbjct: 454 EALALLEEMADNGIRPNVITYNSLLDAYGRQCLMVRKNFPKLRFFLLPRVTMLLKPSVDY 513

Query: 481 -YRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
             ++L+    K+  V  A R+F  M  NG+  + V ++S+  A       +  S +L+ M
Sbjct: 514 DQQSLVDPKQKQALVLAAARVFREMAKNGVKPNVVTFSSILNACSHCASVEDASSLLEAM 573



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 111/360 (30%), Positives = 176/360 (48%), Gaps = 4/360 (1%)

Query: 169 TVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEF 228
           + +++SL +   +D    ++ + V  G   N+ +Y+ LI A  +S  + K  ++   M+ 
Sbjct: 125 STIISSLGRLGRSDWAQLIFDRAVGAGFGNNVFVYSSLICAYGRSGKLAKAVEIFEAMKV 184

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
              + +L  YN +I    K G +  AL +   M  +G+SPD +T+N+LI    R  R  E
Sbjct: 185 V-CKPNLVVYNAVIDACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRANRWEE 243

Query: 289 ARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMA-AKGVYPGVVTYNSIL 345
             R+F ++  +G   + VTY TLI  YCR   +     L E MA + G+ P V+TY++++
Sbjct: 244 CDRIFAEMEERGIARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITYSTMI 303

Query: 346 RKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLM 405
               K G   +A  L  EM  + + PD +  NT+++ + ++G+   A  ++  M EAG  
Sbjct: 304 DGYAKLGLAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFA 363

Query: 406 LDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKL 465
            D  TY AL+  + K  +   A  LL  M   G SP+  +YS L+D YC        + L
Sbjct: 364 KDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMAL 423

Query: 466 LDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWR 525
             +    GL  DV +Y  L+   CK    D A  L   M  NGI  + + Y SL  AY R
Sbjct: 424 FQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEMADNGIRPNVITYNSLLDAYGR 483



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 88/330 (26%), Positives = 159/330 (48%), Gaps = 4/330 (1%)

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           ++F Y++LI  Y + G   +A+ + + M +    P++V YN++I    + G    A R+F
Sbjct: 155 NVFVYSSLICAYGRSGKLAKAVEIFEAM-KVVCKPNLVVYNAVIDACSKGGDYPTALRIF 213

Query: 294 RDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
           R++  +G +P+ +T+ TLI    RAN  EE  R+   M  +G+    VTYN+++   C+ 
Sbjct: 214 REMLEQGMSPDRITFNTLISAAGRANRWEECDRIFAEMEERGIARDDVTYNTLIATYCRG 273

Query: 352 GRIRDANRLLNEMNEKK-IAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
           G++     L+  M +   I P  +T +T+I+ Y K+G    A+ +   M    +  D   
Sbjct: 274 GQMHLGAALMETMAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALFQEMRNQNVEPDGIC 333

Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFV 470
           Y  ++    +    D A  +   M +AGF+    +Y+ L+D Y  +      + LL+E  
Sbjct: 334 YNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMK 393

Query: 471 SRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPK 530
            RG   ++  Y ALI  +CK      A  LF  ++  G+  D V+Y++L     + G P 
Sbjct: 394 QRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPD 453

Query: 531 ACSDILDDMYRRRLMITLKIYRSFSASYAK 560
               +L++M    +   +  Y S   +Y +
Sbjct: 454 EALALLEEMADNGIRPNVITYNSLLDAYGR 483



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 34/199 (17%), Positives = 81/199 (40%), Gaps = 41/199 (20%)

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
           Y      ++ + + ++M+     P++   + L+++  K         +++ + + G+  +
Sbjct: 376 YGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQPD 435

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY-------------- 245
           + LY+ L+  CCK+   D+   LL EM    +R ++ TYN+L+  Y              
Sbjct: 436 VVLYSTLVDGCCKNGSPDEALALLEEMADNGIRPNVITYNSLLDAYGRQCLMVRKNFPKL 495

Query: 246 -----------CKKGMHYEALAVQD----------------RMEREGISPDIVTYNSLIH 278
                       K  + Y+  ++ D                 M + G+ P++VT++S+++
Sbjct: 496 RFFLLPRVTMLLKPSVDYDQQSLVDPKQKQALVLAAARVFREMAKNGVKPNVVTFSSILN 555

Query: 279 GFCREGRMREARRLFRDIK 297
                  + +A  L   ++
Sbjct: 556 ACSHCASVEDASSLLEAMR 574


>gi|449438480|ref|XP_004137016.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
           mitochondrial-like [Cucumis sativus]
          Length = 651

 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 126/460 (27%), Positives = 218/460 (47%), Gaps = 22/460 (4%)

Query: 57  PSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVL 116
           P ++  FF WA      Y H ++ H ++I +LT +      + +  ++  R  L T S  
Sbjct: 128 PEVAVRFFFWA-GKQKKYVHKIECHVSLIELLTFSADLVKIRLVFFELKDRGLLMTESAA 186

Query: 117 NALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLA 176
           N+L+K                  + NL + ++ L V+ +M+ + + P L+    L+N L 
Sbjct: 187 NSLIKS-----------------FGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNGLV 229

Query: 177 KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLF 236
                +   KV++ M    +V +   YN++I   CK+  + K  +   +ME K+V+ D  
Sbjct: 230 NSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKI 289

Query: 237 TYNTLI-ALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD 295
           TY TLI A Y ++      L++   ME  G+     +Y+ +I G C++ +  EA  +F  
Sbjct: 290 TYMTLIQACYSERDFD-TCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFET 348

Query: 296 I--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGR 353
           +  KG   N   YT LID Y +   +EEA+RL E M  +G  P  VTY+ ++  LCK GR
Sbjct: 349 MNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGR 408

Query: 354 IRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKA 413
           + D   L +    K +A + +   +LI+   K G    A  +   M E G   D + Y A
Sbjct: 409 LDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNA 468

Query: 414 LIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
           +I    K  ++D A  L   M + G   +  +++ L+DG   ++  E  +K  D+ + +G
Sbjct: 469 IIDALAKHGKIDQALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKG 528

Query: 474 LCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDS 513
           +   V+ +RAL    C   KV  A ++ + +   GI+ ++
Sbjct: 529 ITPTVASFRALAIGLCLCGKVARACKILDDLAPMGIIPET 568



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 102/392 (26%), Positives = 174/392 (44%), Gaps = 6/392 (1%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           VF +++   L+    A   L+ S     L + +  V+++M + G+  +++ YN L++   
Sbjct: 170 VFFELKDRGLLMTESAANSLIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNGLV 229

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
            S  ++  EK+   M+   +  D  TYN +I  YCK G   +A+     ME + + PD +
Sbjct: 230 NSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKI 289

Query: 272 TYNSLIHGFCREGRMREARRLFRDIKG---ATPNHVTYTTLIDGYCRANDLEEALRLREV 328
           TY +LI     E        L+ +++      P H +Y+ +I G C+     EA  + E 
Sbjct: 290 TYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPH-SYSLVIGGLCKQRKCMEAYAVFET 348

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M  KG    V  Y +++    K G + +A RL   M  +   PD VT + L+N  CK G 
Sbjct: 349 MNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGR 408

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFS-PSYCSYS 447
               M++ +     G+ ++   Y +LI G  KA  ++ A+ L   M + G +  SYC Y+
Sbjct: 409 LDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYC-YN 467

Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGN 507
            ++D        +  L L       G    V  +  LI    K+ K + A + ++ M   
Sbjct: 468 AIIDALAKHGKIDQALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDK 527

Query: 508 GILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
           GI      + +LA      G+      ILDD+
Sbjct: 528 GITPTVASFRALAIGLCLCGKVARACKILDDL 559



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 73/271 (26%), Positives = 127/271 (46%), Gaps = 2/271 (0%)

Query: 274 NSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAA 331
           NSLI  F   G + E   ++R +K  G  P+  TY  L++G   +  +E A ++ EVM  
Sbjct: 187 NSLIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDG 246

Query: 332 KGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTAS 391
             + P  VTYN +++  CK G+++ A     +M  K + PD +T  TLI A     D  +
Sbjct: 247 GKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDT 306

Query: 392 AMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVD 451
            + +   M E GL +   +Y  +I G CK ++   A  +   M   G   +   Y+ L+D
Sbjct: 307 CLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALID 366

Query: 452 GYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILG 511
            Y    + E  ++L +   + G   D   Y  L+   CK  ++D    LF+  +  G+  
Sbjct: 367 SYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAI 426

Query: 512 DSVIYTSLAYAYWRAGEPKACSDILDDMYRR 542
           +++ Y SL     +AG  +   ++ ++M  +
Sbjct: 427 NAMFYASLIDGLGKAGRIEDAENLFEEMSEK 457



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/327 (22%), Positives = 143/327 (43%), Gaps = 38/327 (11%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           L ++ +M    L    H+ ++++  L K R     + V++ M Q G  AN+ +Y  LI +
Sbjct: 308 LSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDS 367

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
             K+  +++  +L   M+ +    D  TY+ L+   CK G   + + + D    +G++ +
Sbjct: 368 YSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAIN 427

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDI--------------------------------- 296
            + Y SLI G  + GR+ +A  LF ++                                 
Sbjct: 428 AMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFG 487

Query: 297 ----KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEG 352
               +G      T+T LIDG  + +  EEA++  + M  KG+ P V ++ ++   LC  G
Sbjct: 488 RMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPTVASFRALAIGLCLCG 547

Query: 353 RIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYK 412
           ++  A ++L+++    I P+      +IN  CK      A K+ + +++ G  +      
Sbjct: 548 KVARACKILDDLAPMGIIPETAF-EDMINTLCKAQRIKEACKLADGIVDRGREIPGRIRT 606

Query: 413 ALIHGFCKAKEMDIAKELLFGMLDAGF 439
            LI+   KA   D+  +L+   +  G+
Sbjct: 607 VLINALRKAGNSDLVIKLMHSKIGIGY 633



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 76/294 (25%), Positives = 120/294 (40%), Gaps = 2/294 (0%)

Query: 275 SLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAK 332
           SLI        + + R +F ++K  G         +LI  +     +EE L +   M   
Sbjct: 153 SLIELLTFSADLVKIRLVFFELKDRGLLMTESAANSLIKSFGNLGLVEELLWVWRRMKEN 212

Query: 333 GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
           G+ P + TYN ++  L     I  A ++   M+  KI PD VT N +I  YCK G    A
Sbjct: 213 GIDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKA 272

Query: 393 MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
           M+    M    +  D+ TY  LI      ++ D    L   M + G      SYS ++ G
Sbjct: 273 MEKFRDMEMKNVKPDKITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYSLVIGG 332

Query: 453 YCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGD 512
            C +        + +    +G   +V++Y ALI  + K   ++ A RLF  M+  G   D
Sbjct: 333 LCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFEPD 392

Query: 513 SVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
           +V Y+ L     ++G      ++ D    + + I    Y S      K   I D
Sbjct: 393 AVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIED 446


>gi|224136310|ref|XP_002326829.1| predicted protein [Populus trichocarpa]
 gi|222835144|gb|EEE73579.1| predicted protein [Populus trichocarpa]
          Length = 664

 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 136/542 (25%), Positives = 235/542 (43%), Gaps = 67/542 (12%)

Query: 33  NIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNK 92
           +++ S++ T   +VL  + +    P  +  FF WA      + H  +S++ M+ IL +N 
Sbjct: 20  SLSPSISKTTFFQVLRFIAS----PPKAFEFFNWASRN--GFAHDSRSYFMMLDILGRNG 73

Query: 93  HFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQV 152
           +   A+N L  I  R         N  VKI D         + L+  Y N  +  + +++
Sbjct: 74  NLNIARNFLFSIERRS--------NGSVKIED------RFCNTLLRSYGNAGLFNEAIKL 119

Query: 153 FDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCK 212
           F  M+   + P +     LL  L K   T+M   V+ +M                   C 
Sbjct: 120 FSLMKSSGVSPSVITFNSLLLILLKRGRTNMAHSVFDEM-------------------CG 160

Query: 213 SSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVT 272
           +  V                 D +T+N LI  +CK  M  E       M R    PD+VT
Sbjct: 161 TYGVT---------------PDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFNCEPDVVT 205

Query: 273 YNSLIHGFCREGRMREA----RRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
           YN+L+ G CR G++R A    + + + +K  +P+ VTYTTL+ GYC   +++EAL + E 
Sbjct: 206 YNTLVDGLCRAGKVRIAHNVVKGMVKKMKDLSPDVVTYTTLVRGYCMKQEIDEALVVFEE 265

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLN-EMNEKKIAPDNVTCNTLINAYCKIG 387
           M ++G+ P  +TYN++++ LC+  +      +L   +  +   PD  T NTL+NA C  G
Sbjct: 266 MVSRGLKPNDITYNTLIKGLCEVQKFDKIKEILGGAVGGRGFVPDTCTYNTLMNAQCDAG 325

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL-------FGMLDAGFS 440
           +   A+K+  +M E  +  D  TY  LI   C+  + + A++L          + D G +
Sbjct: 326 NFDEALKMFKKMKELKVQPDSATYSVLIRNLCQRGDFERAEQLFDKLSDEDILLRDDGCT 385

Query: 441 PSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRL 500
           P   +Y+ + D  C         ++  + + +G   D   Y+ LI   CK+   +   +L
Sbjct: 386 PLVAAYNPIFDFLCKNGKTHKAERVFRQLMKKG-TQDPPSYKTLIIGHCKEGTFEAGYKL 444

Query: 501 FNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAK 560
              M     + D   Y  L   + + GEP      L+ M +   +    ++ S  +   K
Sbjct: 445 LLFMLRRDYVPDFETYVLLINGFLQKGEPILAYKTLERMLKSSYLPKTSVFHSILSELLK 504

Query: 561 DN 562
           ++
Sbjct: 505 ND 506



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 58/252 (23%), Positives = 109/252 (43%), Gaps = 27/252 (10%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNS-------LAKDRLTDMVWKVYKKMVQLGVVANIHLY 203
           Q+FD++   +++     CT L+ +       L K+  T    +V++++++ G   +   Y
Sbjct: 367 QLFDKLSDEDILLRDDGCTPLVAAYNPIFDFLCKNGKTHKAERVFRQLMKKGT-QDPPSY 425

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER 263
             LI   CK    +   KLL  M  +D   D  TY  LI  + +KG    A    +RM +
Sbjct: 426 KTLIIGHCKEGTFEAGYKLLLFMLRRDYVPDFETYVLLINGFLQKGEPILAYKTLERMLK 485

Query: 264 EGISPDIVTYNSLIHGFCREGRMREA---------RRLFRDIKGATPNHVTYTTLIDGYC 314
               P    ++S++    +    RE+         R++ ++I  +T    T   L     
Sbjct: 486 SSYLPKTSVFHSILSELLKNDFARESASFVVLMIDRKIRQNINLSTH---TMRLLFGSGL 542

Query: 315 RANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNV 374
           R     +A ++ E++   G    +V    ++  +C+ G++ DA ++L+   EK    D  
Sbjct: 543 RI----KAFQIVELLYDNGY---MVDMEELIGFICQNGKLLDAQKMLSFCLEKGHNVDIN 595

Query: 375 TCNTLINAYCKI 386
            CN +I   CK+
Sbjct: 596 VCNVVIEGLCKM 607



 Score = 47.4 bits (111), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 43/175 (24%), Positives = 71/175 (40%), Gaps = 5/175 (2%)

Query: 413 ALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFV-S 471
            L+  +  A   + A +L   M  +G SPS  +++ L+     +        + DE   +
Sbjct: 102 TLLRSYGNAGLFNEAIKLFSLMKSSGVSPSVITFNSLLLILLKRGRTNMAHSVFDEMCGT 161

Query: 472 RGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKA 531
            G+  D   +  LIR FCK   VD   R F  M       D V Y +L     RAG+ + 
Sbjct: 162 YGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFNCEPDVVTYNTLVDGLCRAGKVRI 221

Query: 532 CSDILDDMYRRR--LMITLKIYRSFSASYAKDNEILD--LFWSHVVDRGLMSKHI 582
             +++  M ++   L   +  Y +    Y    EI +  + +  +V RGL    I
Sbjct: 222 AHNVVKGMVKKMKDLSPDVVTYTTLVRGYCMKQEIDEALVVFEEMVSRGLKPNDI 276


>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
 gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
          Length = 684

 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 124/493 (25%), Positives = 233/493 (47%), Gaps = 40/493 (8%)

Query: 132 VLSWLVIFYANLKMTQDG--LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYK 189
           V+++ V+  A  K T  G  ++V D+MR     P++    V++N + ++   D   +   
Sbjct: 180 VVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLN 239

Query: 190 KMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKG 249
           ++   G   +   Y  ++   C +   + VE+L  EM  K+   +  T++ L+  +C+ G
Sbjct: 240 RLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGG 299

Query: 250 MHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYT 307
           M   A+ V ++M   G + +    N +I+  C++GR+ +A +   ++   G +P+ ++YT
Sbjct: 300 MVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYT 359

Query: 308 TLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEK 367
           T++ G CRA   E+A  L + M  K   P  VT+N+ +  LC++G I  A  L+ +M+E 
Sbjct: 360 TVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEH 419

Query: 368 KIAPDNVTCNTLINAYCKIGDTASAMKV----------------------KNRMLEAGLM 405
               + VT N L+N +C  G   SA+++                        R+  A  +
Sbjct: 420 GCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKPNTITYTTLLTGLCNAERLDAAAEL 479

Query: 406 LDQF----------TYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCN 455
           L +           T+  L+  FC+   MD A EL+  M++ G +P+  +Y+ L+DG   
Sbjct: 480 LAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITK 539

Query: 456 KNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVI 515
             N E  L+LL   VS G+  D+  Y ++I    ++++V+ A ++F+++Q  G+   +VI
Sbjct: 540 DCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVI 599

Query: 516 YTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDN---EILDLFWSHV 572
           Y  +  A  +        D    M     M     Y +     A ++   E  DL    +
Sbjct: 600 YNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLL-REL 658

Query: 573 VDRGLMSKHIFKE 585
             RG+++K++ +E
Sbjct: 659 CSRGVLNKNLLEE 671



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 120/460 (26%), Positives = 205/460 (44%), Gaps = 46/460 (10%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           +  ++ D+       P ++ CT L+ +L +   T    +V +   + G   ++  YN L+
Sbjct: 61  EAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLV 120

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALA----------- 256
              C+   +D   +L+  M    V  D +TY  +I   C +G   EAL+           
Sbjct: 121 AGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQ 177

Query: 257 ------------------------VQDRMEREGISPDIVTYNSLIHGFCREGRMREARRL 292
                                   V D M  +G +P+IVTYN +I+G CREGR+ +AR  
Sbjct: 178 PSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREF 237

Query: 293 FRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
              +   G  P+ V+YTT++ G C A   E+   L   M  K   P  VT++ ++R  C+
Sbjct: 238 LNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCR 297

Query: 351 EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
            G +  A ++L +M+    A +   CN +IN  CK G    A +  N M   G   D  +
Sbjct: 298 GGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTIS 357

Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFV 470
           Y  ++ G C+A+  + AKELL  M+     P+  +++  +   C K   E    L+++  
Sbjct: 358 YTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMS 417

Query: 471 SRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPK 530
             G  V++  Y AL+  FC + +VD A  LF  M       +++ YT+L      A    
Sbjct: 418 EHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK---PNTITYTTLLTGLCNAERLD 474

Query: 531 ACSDILDDMYRRRL---MITLKIYRSFSASYAKDNEILDL 567
           A +++L +M ++     ++T  +  SF       +E ++L
Sbjct: 475 AAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIEL 514



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 101/387 (26%), Positives = 187/387 (48%), Gaps = 1/387 (0%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N      LV F+    M +  +QV +QM  H    +   C +++N++ K    D  ++  
Sbjct: 284 NEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFL 343

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
             M   G   +   Y  ++   C++   +  ++LL EM  K+   +  T+NT I + C+K
Sbjct: 344 NNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQK 403

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYTT 308
           G+  +A  + ++M   G   +IVTYN+L++GFC +GR+  A  LF  +    PN +TYTT
Sbjct: 404 GLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP-CKPNTITYTT 462

Query: 309 LIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKK 368
           L+ G C A  L+ A  L   M  K   P VVT+N ++   C++G + +A  L+ +M E  
Sbjct: 463 LLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHG 522

Query: 369 IAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAK 428
             P+ +T NTL++   K  ++  A+++ + ++  G+  D  TY ++I    +   ++ A 
Sbjct: 523 CTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAI 582

Query: 429 ELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRF 488
           ++   + D G  P    Y+ ++   C + N +  +      VS G   +   Y  LI   
Sbjct: 583 KMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGL 642

Query: 489 CKKEKVDYAQRLFNLMQGNGILGDSVI 515
             ++ +   + L   +   G+L  +++
Sbjct: 643 ANEDFLKETRDLLRELCSRGVLNKNLL 669



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 116/462 (25%), Positives = 200/462 (43%), Gaps = 46/462 (9%)

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
           P  +  T ++  L           +   M+  G   ++  Y VL+ A CKS+   +  ++
Sbjct: 143 PDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEV 202

Query: 223 LCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR 282
           L EM  K    ++ TYN +I   C++G   +A    +R+   G  PD V+Y +++ G C 
Sbjct: 203 LDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCA 262

Query: 283 EGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAK-------- 332
             R  +   LF ++  K   PN VT+  L+  +CR   +E A+++ E M+          
Sbjct: 263 AKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTL 322

Query: 333 ---------------------------GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMN 365
                                      G  P  ++Y ++L+ LC+  R  DA  LL EM 
Sbjct: 323 CNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMV 382

Query: 366 EKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMD 425
            K   P+ VT NT I   C+ G    A  +  +M E G  ++  TY AL++GFC    +D
Sbjct: 383 RKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVD 442

Query: 426 IAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
            A EL + M      P+  +Y+ L+ G CN    +A  +LL E + +    +V  +  L+
Sbjct: 443 SALELFYSM---PCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLV 499

Query: 486 RRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
             FC+K  +D A  L   M  +G   + + Y +L     +    +   ++L  +    + 
Sbjct: 500 SFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVS 559

Query: 546 ITLKIYRSFSASYAKDN---EILDLFWSHVV-DRGLMSKHIF 583
             +  Y S     ++++   E + +F  H+V D G+  K + 
Sbjct: 560 PDIVTYSSIIGVLSREDRVEEAIKMF--HIVQDLGMRPKAVI 599



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 160/328 (48%), Gaps = 1/328 (0%)

Query: 215 DVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYN 274
           D+ +  +L+     +    D++    LI   C++G   +A  V    ER G + D+  YN
Sbjct: 58  DLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYN 117

Query: 275 SLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGV 334
           +L+ G+CR G++  ARRL   +  A P+  TYT +I G C    + EAL L + M  +G 
Sbjct: 118 TLVAGYCRYGQLDAARRLIASMPVA-PDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGC 176

Query: 335 YPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMK 394
            P VVTY  +L  +CK      A  +L+EM  K   P+ VT N +IN  C+ G    A +
Sbjct: 177 QPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARE 236

Query: 395 VKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYC 454
             NR+   G   D  +Y  ++ G C AK  +  +EL   M++    P+  ++  LV  +C
Sbjct: 237 FLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFC 296

Query: 455 NKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSV 514
                E  +++L++    G   + ++   +I   CK+ +VD A +  N M   G   D++
Sbjct: 297 RGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTI 356

Query: 515 IYTSLAYAYWRAGEPKACSDILDDMYRR 542
            YT++     RA   +   ++L +M R+
Sbjct: 357 SYTTVLKGLCRAERWEDAKELLKEMVRK 384


>gi|359489321|ref|XP_002269223.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 889

 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 130/499 (26%), Positives = 238/499 (47%), Gaps = 6/499 (1%)

Query: 75  KHSLQSHWTMIHILTKNKHFKSAQNMLEKIALR-DFLSTPSVLNALVKIHDDPDGNSHVL 133
           + +++S     H+L   +    AQ+++  +  R   L +  ++  + + H   + +  VL
Sbjct: 140 ESTIRSCCVAAHLLAAEELRHVAQDVIWWVIARIGVLRSGDLVEFMWRGHHVYESDFSVL 199

Query: 134 SWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQ 193
             L+  + N +M    L++  +MR   + P      +L   L +      VWK++K +++
Sbjct: 200 DSLMRAFVNAEMGFQALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIR 259

Query: 194 LGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYE 253
            G     + ++ +I   C+   +   E LL  M       + F YN +I   C +G   +
Sbjct: 260 RGPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSD 319

Query: 254 ALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLID 311
           ALA  + M   G +P +VT+N++I+ FC+EG + EAR+LF  +K  G +PN + Y TL++
Sbjct: 320 ALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMN 379

Query: 312 GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAP 371
           GY +  ++++A  L E M  KG+ P  +T+N ++    K GR  D +RLL +++   + P
Sbjct: 380 GYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLP 439

Query: 372 DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
           D    +  ++  C  G    AM+    MLE GL      + ++I  + +A   D A E  
Sbjct: 440 DRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAY 499

Query: 432 FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
             M+  G +PS  + S L+ G       +   +L+ + + +GL V+   +  L+ +F K+
Sbjct: 500 KLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKR 559

Query: 492 EKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIY 551
             V  AQ L+  M+  GI  D V +++      + G  +   ++  +M R+ L+     Y
Sbjct: 560 GDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAY 619

Query: 552 RSFSASY---AKDNEILDL 567
            S    +    K NE L L
Sbjct: 620 NSLICGFCKCGKLNEALKL 638



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 102/346 (29%), Positives = 184/346 (53%), Gaps = 3/346 (0%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           + ++    M    L P + A   ++ + ++  L D  ++ YK MV  G+  +    + L+
Sbjct: 459 EAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLL 518

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
                +  + +  +L+ +M  K +  +   +  L+  + K+G    A ++   MER GI 
Sbjct: 519 MGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIF 578

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
           PD+V +++ I G  ++G + EA  +F ++  KG  PN+  Y +LI G+C+   L EAL+L
Sbjct: 579 PDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKL 638

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
            +VM  +G+ P + T N I+  LCK+GR+R A  +  +M++  ++PD +T NTLIN YCK
Sbjct: 639 EKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCK 698

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
             D  +A  + NRM  +G   D  TY   IHGFC ++ M+ A  +L  ++ AG  P+  +
Sbjct: 699 AFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAGIVPNTVT 758

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
           Y+ +++G C+   + A++ L    +      +V     L+ +F K+
Sbjct: 759 YNSMLNGVCSDILDRAMI-LTARLLKMAFVPNVVTANLLLSQFYKQ 803



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 115/451 (25%), Positives = 218/451 (48%), Gaps = 16/451 (3%)

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
           Y  ++       ++++MR   + P      +L++   K    +   ++ K +  LG++ +
Sbjct: 381 YVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPD 440

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
             L+++ +   C +  +D+  + L +M  K +   +  +N++IA Y + G+  +A     
Sbjct: 441 RSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYK 500

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRAN 317
            M   G++P   T +SL+ G    GR++EA  L   +  KG + N++ +T L+D + +  
Sbjct: 501 LMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRG 560

Query: 318 DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCN 377
           D+  A  L   M  +G++P VV +++ +  L K+G + +A  +  EM  K + P+N   N
Sbjct: 561 DVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYN 620

Query: 378 TLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA 437
           +LI  +CK G    A+K++  M   GL+ D FT   +I G CK   M  A  +   M   
Sbjct: 621 SLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQT 680

Query: 438 GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYA 497
           G SP   +Y+ L++GYC   +      L++   + G   D++ Y   I  FC   +++ A
Sbjct: 681 GLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRA 740

Query: 498 QRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYR-SFSA 556
             + + +   GI+ ++V Y S+            CSDILD    R +++T ++ + +F  
Sbjct: 741 VLMLDELVSAGIVPNTVTYNSMLNG--------VCSDILD----RAMILTARLLKMAFVP 788

Query: 557 SYAKDNEILDLFWSH-VVDRGLMSKHIFKEM 586
           +    N +L  F+   + +R LM  H   E+
Sbjct: 789 NVVTANLLLSQFYKQGMPERTLMWGHKLSEI 819



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 77/267 (28%), Positives = 138/267 (51%), Gaps = 5/267 (1%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
            ++ +M    + P + A +  ++ L+K  L +  + V+ +M++ G++ N   YN LI   
Sbjct: 567 SLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGF 626

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           CK   +++  KL   M  + +  D+FT N +I   CK+G    A+ V   M + G+SPDI
Sbjct: 627 CKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDI 686

Query: 271 VTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
           +TYN+LI+G+C+   M  A  L   +   G+ P+  TY   I G+C +  +  A+ + + 
Sbjct: 687 ITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDE 746

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLN-EMNEKKIAPDNVTCNTLINAYCKIG 387
           + + G+ P  VTYNS+L  +C +  I D   +L   + +    P+ VT N L++ + K G
Sbjct: 747 LVSAGIVPNTVTYNSMLNGVCSD--ILDRAMILTARLLKMAFVPNVVTANLLLSQFYKQG 804

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKAL 414
                +   +++ E     D+ TYK +
Sbjct: 805 MPERTLMWGHKLSEIPYAFDEITYKIM 831


>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 762

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 120/456 (26%), Positives = 209/456 (45%), Gaps = 9/456 (1%)

Query: 124 DDPDGNS--HVLSWLVIFYANLKM--TQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDR 179
           DD  G S   V+S+  +     K   +      + +M    + P +   + ++ +L K +
Sbjct: 186 DDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQ 245

Query: 180 LTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYN 239
             D   +V   MV+ GV+ N   YN ++H  C S    +    L +M    V  D+ TYN
Sbjct: 246 AMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYN 305

Query: 240 TLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--K 297
           +L+   CK G   EA  + D M + G+ PDI TY +L+ G+  +G + E   L   +   
Sbjct: 306 SLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRN 365

Query: 298 GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDA 357
           G  P+H  +  LI  Y +   ++EA+ +   M   G+ P VVTY +++  LCK G + DA
Sbjct: 366 GIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDA 425

Query: 358 NRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHG 417
                +M ++ + P+ +   +LI++ C       A ++   ML+ G+ L+   + ++IH 
Sbjct: 426 MLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHS 485

Query: 418 FCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVD 477
            CK   +  +++L   M+  G  P+  +YS L+DGYC     +   KLL    S G+  D
Sbjct: 486 HCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPD 545

Query: 478 VSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILD 537
              Y  LI  +C+  ++D A  LF  M  +G+  + + Y  +    +      A  ++  
Sbjct: 546 CVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYV 605

Query: 538 DMYRRRLMITLKIYRSFSASYAKDN---EILDLFWS 570
            + +    + L  Y        K+N   E L +F +
Sbjct: 606 GITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQN 641



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 114/403 (28%), Positives = 205/403 (50%), Gaps = 6/403 (1%)

Query: 144 KMTQDGLQ-VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQ---LGVVAN 199
           K T D +  V  +M   + MP + +CT+LL  L  +  +    ++   M      G   +
Sbjct: 136 KRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPD 195

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
           +  Y  +I+   K  D DK      EM  + +  D+ TY+++IA  CK     +A+ V  
Sbjct: 196 VVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLT 255

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRAN 317
            M + G+ P+ +TYNS++HG+C   + +EA    + ++  G  P+ VTY +L+D  C+  
Sbjct: 256 TMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNG 315

Query: 318 DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCN 377
              EA ++ + M  +G+ P + TY ++L+    +G + + + LL+ M    I PD+   N
Sbjct: 316 RSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFN 375

Query: 378 TLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA 437
            LI AY K      AM V ++M + GL  +  TY A+I   CK+  +D A      M+D 
Sbjct: 376 ILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDE 435

Query: 438 GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYA 497
           G +P+   Y+ L+   C  +  +   +L+ E + RG+C++   + ++I   CK+ +V  +
Sbjct: 436 GLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIES 495

Query: 498 QRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMY 540
           ++LF+LM   G+  + + Y++L   Y  AG+    + +L  M+
Sbjct: 496 EKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMF 538



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 109/393 (27%), Positives = 195/393 (49%), Gaps = 4/393 (1%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           ++L+ +V+    PD   HV + L+  YA  +   + + VF +MR H L P++     ++ 
Sbjct: 357 ALLDLMVRNGIHPD--HHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIG 414

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
            L K    D     +++M+  G+  NI +Y  LIH+ C     DK E+L+ EM  + +  
Sbjct: 415 ILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICL 474

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           +   +N++I  +CK+G   E+  + D M R G+ P+++TY++LI G+C  G+M EA +L 
Sbjct: 475 NTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLL 534

Query: 294 RDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
             +   G  P+ VTY TLI+GYCR + +++AL L + M + GV P ++TYN IL+ L   
Sbjct: 535 SSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHT 594

Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
            R   A  L   + +     +  T N +++  CK   T  A+++   +    L L+  T+
Sbjct: 595 RRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTF 654

Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
             +I    K    D AK+L   +   G  P   +YS + +    +   E L  L      
Sbjct: 655 NIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEE 714

Query: 472 RGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
            G   +  +  +++R+  ++  +  A    +++
Sbjct: 715 NGCTANSRMLNSIVRKLLQRGDITRAGTYLSMI 747



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 111/429 (25%), Positives = 201/429 (46%), Gaps = 18/429 (4%)

Query: 91  NKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVI------------ 138
           +K + +   ML++    D ++  S++ AL K     D    VL+ +V             
Sbjct: 213 DKAYSTYHEMLDRRISPDVVTYSSIIAALCK-GQAMDKAMEVLTTMVKNGVMPNCMTYNS 271

Query: 139 ---FYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
               Y + +  ++ +    +MR   + P +     L++ L K+  +    K++  M + G
Sbjct: 272 ILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRG 331

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
           +  +I  Y  L+        + ++  LL  M    +  D   +N LI  Y K+    EA+
Sbjct: 332 LEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAM 391

Query: 256 AVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGY 313
            V  +M + G++P++VTY ++I   C+ G + +A   F  +  +G TPN + YT+LI   
Sbjct: 392 LVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSL 451

Query: 314 CRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDN 373
           C  +  ++A  L   M  +G+    + +NSI+   CKEGR+ ++ +L + M    + P+ 
Sbjct: 452 CIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNV 511

Query: 374 VTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFG 433
           +T +TLI+ YC  G    A K+ + M   G+  D  TY  LI+G+C+   MD A  L   
Sbjct: 512 ITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKE 571

Query: 434 MLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEK 493
           M+ +G SP+  +Y+ ++ G  +     A  +L       G  +++S Y  ++   CK   
Sbjct: 572 MVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNL 631

Query: 494 VDYAQRLFN 502
            D A R+F 
Sbjct: 632 TDEALRMFQ 640



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 104/403 (25%), Positives = 181/403 (44%), Gaps = 14/403 (3%)

Query: 187 VYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL--LCEMEFKDVRADLFTYNTLIAL 244
           V++++++ G  A+I+  N  +    + S    V +   +       V   + TY  LI  
Sbjct: 37  VFEELLRRGRGASIYGLNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYGILIGC 96

Query: 245 YCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA-----RRLFRDIKGA 299
            C+ G      A    + ++G   + +T+  L+ G C + R  +A     RR+       
Sbjct: 97  CCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTE--LSC 154

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMA---AKGVYPGVVTYNSILRKLCKEGRIRD 356
            P+  + T L+ G C  N  +EAL L  +MA     G  P VV+Y +++    KEG    
Sbjct: 155 MPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDK 214

Query: 357 ANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIH 416
           A    +EM +++I+PD VT +++I A CK      AM+V   M++ G+M +  TY +++H
Sbjct: 215 AYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILH 274

Query: 417 GFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCV 476
           G+C +++   A   L  M   G  P   +Y+ L+D  C         K+ D    RGL  
Sbjct: 275 GYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEP 334

Query: 477 DVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDIL 536
           D++ Y  L++ +  K  +     L +LM  NGI  D  ++  L  AY +  +      + 
Sbjct: 335 DIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVF 394

Query: 537 DDMYRRRLMITLKIYRSFSASYAKDNEILD--LFWSHVVDRGL 577
             M +  L   +  Y +      K   + D  L++  ++D GL
Sbjct: 395 SKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGL 437


>gi|346703736|emb|CBX24404.1| hypothetical_protein [Oryza glaberrima]
          Length = 1765

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 112/373 (30%), Positives = 179/373 (47%), Gaps = 2/373 (0%)

Query: 149  GLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIH 208
            GL +  +M     +P L     L+N L K    + +  ++ +M + G   N+ +YN +I 
Sbjct: 1201 GLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVID 1260

Query: 209  ACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISP 268
            A CK     +   +L +M       D+ T+NTLI   C +G   +A        R  ++P
Sbjct: 1261 ALCKCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNP 1320

Query: 269  DIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLR 326
            + ++Y  LIHGFC  G +  A  L  ++  +G TP+ VT+  LI G   A  + EAL +R
Sbjct: 1321 NQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVR 1380

Query: 327  EVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKI 386
            E M  + V+P V  YN ++  LCK+  +  A  +L EM EK + PD     TLI+ + + 
Sbjct: 1381 EKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRS 1440

Query: 387  GDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSY 446
             +   A K+   M   G+  D  +  A+I G+C+   M  A   +  M   G  P   +Y
Sbjct: 1441 ENLGDARKIFEFMEHKGICPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTY 1500

Query: 447  SWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQG 506
            + ++ GY  + N    L+ L + + R    +V  Y +LI  +CK    D+A+ LF  MQ 
Sbjct: 1501 TTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDFAEGLFANMQA 1560

Query: 507  NGILGDSVIYTSL 519
              +  + V YT L
Sbjct: 1561 EALSPNVVTYTIL 1573



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 137/581 (23%), Positives = 246/581 (42%), Gaps = 66/581 (11%)

Query: 26   WAKLLNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMI 85
            WA+ L   + S L+   +   + +L +    P L+ A   W++S  P++  +LQ    + 
Sbjct: 990  WARSLAALLPSPLSDAHLAAAVSSLPD----PDLAVALLSWSQS--PDHHVALQDPTPLA 1043

Query: 86   HILTKNKH-----FKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFY 140
            H            F +  + L+ ++L     T + L ALV                   Y
Sbjct: 1044 HSALLRLLARSRRFDAVDDTLQSMSLAGAAPTRACLGALVAA-----------------Y 1086

Query: 141  ANLKMTQDGLQVFDQMR-VHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
            A+  M     ++ +++R  +  +P +  C  LL  L + R  D   K+Y +M+     A+
Sbjct: 1087 ADAGMLGKATKMCERVREQYGSLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLGKDSGAD 1146

Query: 200  IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
             +   VL+   C    V++  KL+           +  YN LI  YC++G     L +  
Sbjct: 1147 NYSTCVLVRGLCLERRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLG 1206

Query: 260  RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRAN 317
             ME +G  P +VTY SLI+   ++G + +   LF ++  +G +PN   Y ++ID  C+  
Sbjct: 1207 EMETKGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCKCR 1266

Query: 318  DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCN 377
               +A+ + + M A G  P ++T+N+++  LC EG +R A   L E   +++ P+ ++  
Sbjct: 1267 SATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYT 1326

Query: 378  TLINAYCKIGD-----------------------------------TASAMKVKNRMLEA 402
             LI+ +C  G+                                    + A+ V+ +M E 
Sbjct: 1327 PLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTER 1386

Query: 403  GLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEAL 462
             +  D   Y  LI G CK + +  AK +L  ML+    P    Y+ L+DG+    N    
Sbjct: 1387 QVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDA 1446

Query: 463  LKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYA 522
             K+ +    +G+C D+    A+I+ +C+   +  A    + M+  G + D   YT++   
Sbjct: 1447 RKIFEFMEHKGICPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISG 1506

Query: 523  YWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNE 563
            Y + G        L DM +R+    +  Y S    Y K  +
Sbjct: 1507 YAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGD 1547



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 80/326 (24%), Positives = 136/326 (41%), Gaps = 56/326 (17%)

Query: 148  DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
            + L V ++M    + P ++   VL++ L K R+      + ++M++  V  +  +Y  LI
Sbjct: 1375 EALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLI 1434

Query: 208  HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
                +S ++    K+   ME K +  D+ + N +I  YC+ GM  EA+     M + G  
Sbjct: 1435 DGFIRSENLGDARKIFEFMEHKGICPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCI 1494

Query: 268  PD-----------------------------------IVTYNSLIHGFCREGRMREARRL 292
            PD                                   +VTY+SLI+G+C+ G    A  L
Sbjct: 1495 PDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDFAEGL 1554

Query: 293  FRDIKGA--TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL-- 348
            F +++    +PN VTYT LI    + + +  A    E M      P  VT + ++  L  
Sbjct: 1555 FANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTS 1614

Query: 349  ----------CKEGRIRDANRLLNEMNEKKIA-----PDNVTCNTLINAYCKIGDTASAM 393
                      C    +   + LL     KK+      P N   N +I + C+      A+
Sbjct: 1615 CTPCVINSICCNTSEVHGKDALLVVF--KKLVFDIGDPRNSAYNAIIFSLCRHNMLREAL 1672

Query: 394  KVKNRMLEAGLMLDQFTYKALIHGFC 419
              KNRM + G + +  T+ +L++GFC
Sbjct: 1673 DFKNRMAKKGYVPNPITFLSLLYGFC 1698



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 73/326 (22%), Positives = 143/326 (43%), Gaps = 40/326 (12%)

Query: 84   MIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANL 143
            +I  L K +   +A+N+LE++  ++                 PD    V + L+  +   
Sbjct: 1398 LISGLCKKRMLPAAKNILEEMLEKNV---------------QPD--EFVYATLIDGFIRS 1440

Query: 144  KMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLY 203
            +   D  ++F+ M    + P + +C  ++    +  +          M ++G + +   Y
Sbjct: 1441 ENLGDARKIFEFMEHKGICPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTY 1500

Query: 204  NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER 263
              +I    K  +++   + LC+M  +  + ++ TY++LI  YCK G    A  +   M+ 
Sbjct: 1501 TTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDFAEGLFANMQA 1560

Query: 264  EGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGY-----CRA 316
            E +SP++VTY  LI    ++ ++  A   F    +   +PN VT   L++G      C  
Sbjct: 1561 EALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVI 1620

Query: 317  NDL---------EEALRLREVMAAKGVY----PGVVTYNSILRKLCKEGRIRDANRLLNE 363
            N +         ++AL    V+  K V+    P    YN+I+  LC+   +R+A    N 
Sbjct: 1621 NSICCNTSEVHGKDALL---VVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNR 1677

Query: 364  MNEKKIAPDNVTCNTLINAYCKIGDT 389
            M +K   P+ +T  +L+  +C +G +
Sbjct: 1678 MAKKGYVPNPITFLSLLYGFCSVGKS 1703


>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
 gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
          Length = 600

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 119/423 (28%), Positives = 200/423 (47%), Gaps = 16/423 (3%)

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
           P + +   +++ LA     D  +K +  M+  G   ++  +  LIH  CK+       KL
Sbjct: 5   PTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHKL 64

Query: 223 LCEMEFKDVRADLFTYNTLIALYCKKG----MHYEALAVQDRMEREGISPDIVTYNSLIH 278
           L     K  R D+F Y ++I  YCK G     ++ A+  +  +       D+++Y ++I 
Sbjct: 65  L-NQALKRFRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASL-------DVISYTTVIK 116

Query: 279 GFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYP 336
           G     R+ EA  LF ++K  G +PN V YT +IDG  +A  +E+ L+  E M+     P
Sbjct: 117 GLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVP 176

Query: 337 GVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVK 396
              TY  ++  LCK   + DA ++  +M +K   PD +T  TLI+ + K      A K+ 
Sbjct: 177 TRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLL 236

Query: 397 NRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNK 456
           + ML  G      TY +++HGFCK   ++ AKE++  M + G  P    ++ L+  Y +K
Sbjct: 237 DVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSK 296

Query: 457 NNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIY 516
              E   ++L E  +RG   DV +Y +LI       +V  A+ +F+ M   G   D++ Y
Sbjct: 297 GRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTY 356

Query: 517 TSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRG 576
            ++   + + G  +A  +IL+ M +  +      Y S    Y K   +   F   V DR 
Sbjct: 357 GTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFG--VYDRM 414

Query: 577 LMS 579
           + S
Sbjct: 415 VAS 417



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 140/550 (25%), Positives = 243/550 (44%), Gaps = 33/550 (6%)

Query: 24  GHWAKLLNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWT 83
           GH  KLLN  +        ++  +++ Y  C    L   +F+   +  P     + S+ T
Sbjct: 61  GH--KLLNQALKRFRPDVFLYTSVIHGY--CKAGDLDTGYFR---AVTPKASLDVISYTT 113

Query: 84  MIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANL 143
           +I  L  +K    A  + E+  L+    +P                 +V+++  +    L
Sbjct: 114 VIKGLADSKRIDEACELFEE--LKTAGCSP-----------------NVVAYTAVIDGLL 154

Query: 144 KM--TQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIH 201
           K    +DGL+ F++M   + +P     TV+++ L K ++     KV+++MVQ G V +  
Sbjct: 155 KAGRIEDGLKNFEEMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTI 214

Query: 202 LYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRM 261
            Y  LI    K+S +D+  KLL  M  K       TY +++  +CK  M  EA  V  +M
Sbjct: 215 TYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQM 274

Query: 262 EREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDL 319
              G  P +  + SL+  +  +GR  EA ++  ++  +G  P+ + YT+LID       +
Sbjct: 275 RERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRV 334

Query: 320 EEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTL 379
            EA  + + M  KG  P  +TY +I++   K G +  A  +L  M +  + PD    N+L
Sbjct: 335 PEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSL 394

Query: 380 INAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD-AG 438
           ++ Y K+     A  V +RM+ +G+  +  T+  L+HG  K  + D A  L   ML+   
Sbjct: 395 MDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEE 454

Query: 439 FSPSYCSYSWLVDGYCNKNN-EEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYA 497
             P+  SY+ L+DG        EA L+   E + RG+  +   Y +LI    K  ++  A
Sbjct: 455 VPPTLVSYTILIDGLGKAGRVSEAFLQ-FQEMIDRGIIPECHTYTSLIYSLAKAGRIPEA 513

Query: 498 QRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSAS 557
           ++L   M   G+  D   Y++L      +       D+  +M +R        Y+     
Sbjct: 514 KKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRG 573

Query: 558 YAKDNEILDL 567
           +      LDL
Sbjct: 574 FRAAGRALDL 583



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 70/263 (26%), Positives = 119/263 (45%), Gaps = 4/263 (1%)

Query: 298 GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDA 357
           G  P  V+Y T+I G    + ++EA +    M   G  P V+ + +++   CK G+ +  
Sbjct: 2   GCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVG 61

Query: 358 NRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHG 417
           ++LLN+   K+  PD     ++I+ YCK GD  +      R +     LD  +Y  +I G
Sbjct: 62  HKLLNQAL-KRFRPDVFLYTSVIHGYCKAGDLDTGY---FRAVTPKASLDVISYTTVIKG 117

Query: 418 FCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVD 477
              +K +D A EL   +  AG SP+  +Y+ ++DG       E  LK  +E         
Sbjct: 118 LADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPT 177

Query: 478 VSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILD 537
            + Y  +I   CK + +  A ++F  M   G + D++ YT+L   + +A +      +LD
Sbjct: 178 RTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLD 237

Query: 538 DMYRRRLMITLKIYRSFSASYAK 560
            M  +    T   Y S    + K
Sbjct: 238 VMLTKGPEPTAVTYGSIVHGFCK 260


>gi|356503775|ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Glycine max]
          Length = 777

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 121/463 (26%), Positives = 211/463 (45%), Gaps = 32/463 (6%)

Query: 107 RDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLH 166
           R F  T +V   ++     PD  ++     V     LK    G ++   M    + P + 
Sbjct: 136 RHFEKTLAVFADVIDSGTRPDAVAY--GKAVQAAVMLKDLDKGFELMKSMVKDGMGPSVF 193

Query: 167 ACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEM 226
           A  ++L  L K R      K++ +M+Q  +V N   YN LI   CK   +++       M
Sbjct: 194 AYNLVLGGLCKVRRIKDARKLFDEMIQRNMVPNTVTYNTLIDGYCKVGGIEEALGFKERM 253

Query: 227 EFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISP------------------ 268
           + ++V  +L TYN+L+   C  G   +A  V   ME  G  P                  
Sbjct: 254 KEQNVECNLVTYNSLLNGLCGSGRVDDAREVLLEMEGSGFLPGGFLSFVFDDHSNGAGDD 313

Query: 269 ----------DIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRA 316
                     D  TY  L++G CR GR+ +A  +   +   G TP+ ++Y  L++ YC+ 
Sbjct: 314 GLFDGKEIRIDERTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQE 373

Query: 317 NDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTC 376
            D+++A+   E M  +G+ P  +T+N+++ K C+ G +  A   +  M EK ++P   T 
Sbjct: 374 GDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETY 433

Query: 377 NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD 436
           N+LIN Y + G      +  + M +AG+  +  +Y +LI+  CK +++  A+ +L  M+ 
Sbjct: 434 NSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIG 493

Query: 437 AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDY 496
            G SP+   Y+ L++  C+ +  +   +  DE +  G+   +  Y  LI    +  +V  
Sbjct: 494 RGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKK 553

Query: 497 AQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
           A+ LF  M G G   D + Y SL   Y ++   + C ++ D M
Sbjct: 554 AEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKM 596



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 131/526 (24%), Positives = 232/526 (44%), Gaps = 43/526 (8%)

Query: 72  PNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIH---DDPDG 128
           P Y+  LQ    +  ++++ +   + +       LR  L T +  ++L ++H     P  
Sbjct: 36  PQYQKRLQKVQKLETLISRGRTITARR------FLRSLLLTKTAFSSLSELHAHVSKPFF 89

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           + ++L WL    +  KM  +   ++  MR    +P   +   LL +L   R  +    V+
Sbjct: 90  SDNLL-WLC---SVSKMLDEATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVF 145

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
             ++  G   +   Y   + A     D+DK  +L+  M    +   +F YN ++   CK 
Sbjct: 146 ADVIDSGTRPDAVAYGKAVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKV 205

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTY 306
               +A  + D M +  + P+ VTYN+LI G+C+ G + EA      +K      N VTY
Sbjct: 206 RRIKDARKLFDEMIQRNMVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTY 265

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVV--------------------------- 339
            +L++G C +  +++A  +   M   G  PG                             
Sbjct: 266 NSLLNGLCGSGRVDDAREVLLEMEGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRIDE 325

Query: 340 -TYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNR 398
            TY  +L  LC+ GRI  A  +L ++ E  + P  ++ N L+NAYC+ GD   A+    +
Sbjct: 326 RTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQ 385

Query: 399 MLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNN 458
           M E GL  ++ T+  +I  FC+  E+D A+  +  M++ G SP+  +Y+ L++GY  K +
Sbjct: 386 MEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGH 445

Query: 459 EEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTS 518
                + LDE    G+  +V  Y +LI   CK  K+  A+ +   M G G+  ++ IY  
Sbjct: 446 FVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNM 505

Query: 519 LAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
           L  A     + K      D+M +  +  TL  Y +      ++  +
Sbjct: 506 LIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRV 551



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 124/527 (23%), Positives = 229/527 (43%), Gaps = 54/527 (10%)

Query: 88  LTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQ 147
           L K +  K A+ + +++  R+ +      N L+      DG           Y  +   +
Sbjct: 202 LCKVRRIKDARKLFDEMIQRNMVPNTVTYNTLI------DG-----------YCKVGGIE 244

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHL----- 202
           + L   ++M+  N+  +L     LLN L      D   +V  +M   G +    L     
Sbjct: 245 EALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDAREVLLEMEGSGFLPGGFLSFVFD 304

Query: 203 -----------------------YNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYN 239
                                  Y +L++  C+   ++K E++L ++    V     +YN
Sbjct: 305 DHSNGAGDDGLFDGKEIRIDERTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYN 364

Query: 240 TLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--K 297
            L+  YC++G   +A+   ++ME  G+ P+ +T+N++I  FC  G +  A    R +  K
Sbjct: 365 ILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEK 424

Query: 298 GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDA 357
           G +P   TY +LI+GY +           + M   G+ P V++Y S++  LCK+ ++ DA
Sbjct: 425 GVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDA 484

Query: 358 NRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHG 417
             +L +M  + ++P+    N LI A C +     A +  + M+++G+     TY  LI+G
Sbjct: 485 EIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLING 544

Query: 418 FCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVD 477
             +   +  A++L   M   G +P   +Y+ L+ GY    N +  L+L D+    G+   
Sbjct: 545 LGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPT 604

Query: 478 VSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILD 537
           V  +  LI   C+KE V    ++F  M    ++ D  +Y  + Y+Y   G       +  
Sbjct: 605 VGTFHPLIYA-CRKEGVVTMDKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQ 663

Query: 538 DMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVD----RGLMSK 580
            M  + +      Y S   +Y +D  + ++   H+VD    +GL+ K
Sbjct: 664 QMVDQGVDCDKVTYNSLILAYLRDRRVSEI--KHLVDDMKAKGLVPK 708



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 121/422 (28%), Positives = 191/422 (45%), Gaps = 23/422 (5%)

Query: 170 VLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFK 229
           +LLN L +    +   +V  K+V+ GV  +   YN+L++A C+  DV K      +ME +
Sbjct: 330 ILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEER 389

Query: 230 DVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA 289
            +  +  T+NT+I+ +C+ G    A     RM  +G+SP + TYNSLI+G+ ++G     
Sbjct: 390 GLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRC 449

Query: 290 RRLFR--DIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRK 347
                  D  G  PN ++Y +LI+  C+   L +A  +   M  +GV P    YN ++  
Sbjct: 450 FEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEA 509

Query: 348 LCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLD 407
            C   +++DA R  +EM +  I    VT NTLIN   + G    A  +  +M   G   D
Sbjct: 510 SCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPD 569

Query: 408 QFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLD 467
             TY +LI G+ K+       EL   M   G  P+  ++  L+   C K     + K+  
Sbjct: 570 VITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYA-CRKEGVVTMDKMFQ 628

Query: 468 EFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
           E +   L  D  VY  +I  + +   V  A  L   M   G+  D V Y SL  AY R  
Sbjct: 629 EMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDR 688

Query: 528 EPKACSDILDDMYRRRLMITLKIY----------RSFSASYAKDNEILDLFW-SHVVDRG 576
                  ++DDM  + L+  +  Y          + F+ +Y         FW   +V+RG
Sbjct: 689 RVSEIKHLVDDMKAKGLVPKVDTYNILIKGLCDLKDFNGAY---------FWYREMVERG 739

Query: 577 LM 578
           L+
Sbjct: 740 LL 741



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 93/333 (27%), Positives = 163/333 (48%), Gaps = 3/333 (0%)

Query: 155 QMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSS 214
           +M    + P +     L+N   +       ++   +M + G+  N+  Y  LI+  CK  
Sbjct: 420 RMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDR 479

Query: 215 DVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYN 274
            +   E +L +M  + V  +   YN LI   C      +A    D M + GI   +VTYN
Sbjct: 480 KLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYN 539

Query: 275 SLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAK 332
           +LI+G  R GR+++A  LF  +  KG  P+ +TY +LI GY ++ + ++ L L + M   
Sbjct: 540 TLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKIL 599

Query: 333 GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
           G+ P V T++ ++    KEG +   +++  EM +  + PD    N +I +Y + G+   A
Sbjct: 600 GIKPTVGTFHPLIYACRKEGVVT-MDKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKA 658

Query: 393 MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
           M +  +M++ G+  D+ TY +LI  + + + +   K L+  M   G  P   +Y+ L+ G
Sbjct: 659 MSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVSEIKHLVDDMKAKGLVPKVDTYNILIKG 718

Query: 453 YCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
            C+  +         E V RGL ++VS+   LI
Sbjct: 719 LCDLKDFNGAYFWYREMVERGLLLNVSMCYQLI 751



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 97/396 (24%), Positives = 181/396 (45%), Gaps = 36/396 (9%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           +V  ++  + + P   +  +L+N+  ++          ++M + G+  N   +N +I   
Sbjct: 346 EVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKF 405

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           C++ +VD  E  +  M  K V   + TYN+LI  Y +KG         D M++ GI P++
Sbjct: 406 CETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNV 465

Query: 271 VTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
           ++Y SLI+  C++ ++ +A  +  D+  +G +PN   Y  LI+  C  + L++A R  + 
Sbjct: 466 ISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDE 525

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M   G+   +VTYN+++  L + GR++ A  L  +M  K   PD +T N+LI+ Y K  +
Sbjct: 526 MIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVN 585

Query: 389 TASAMKVKNRM----------------------------------LEAGLMLDQFTYKAL 414
           T   +++ ++M                                  L+  L+ DQF Y  +
Sbjct: 586 TQKCLELYDKMKILGIKPTVGTFHPLIYACRKEGVVTMDKMFQEMLQMDLVPDQFVYNEM 645

Query: 415 IHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGL 474
           I+ + +   +  A  L   M+D G      +Y+ L+  Y        +  L+D+  ++GL
Sbjct: 646 IYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVSEIKHLVDDMKAKGL 705

Query: 475 CVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGIL 510
              V  Y  LI+  C  +  + A   +  M   G+L
Sbjct: 706 VPKVDTYNILIKGLCDLKDFNGAYFWYREMVERGLL 741



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 80/306 (26%), Positives = 139/306 (45%), Gaps = 38/306 (12%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDR--------LTDMV----------------- 184
            +  D+M    + P++ +   L+N L KDR        L DM+                 
Sbjct: 450 FEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEA 509

Query: 185 ----------WKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRAD 234
                     ++ + +M+Q G+ A +  YN LI+   ++  V K E L  +M  K    D
Sbjct: 510 SCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPD 569

Query: 235 LFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR 294
           + TYN+LI+ Y K     + L + D+M+  GI P + T++ LI+  CR+  +    ++F+
Sbjct: 570 VITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYA-CRKEGVVTMDKMFQ 628

Query: 295 DI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEG 352
           ++      P+   Y  +I  Y    ++ +A+ L + M  +GV    VTYNS++    ++ 
Sbjct: 629 EMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDR 688

Query: 353 RIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYK 412
           R+ +   L+++M  K + P   T N LI   C + D   A      M+E GL+L+     
Sbjct: 689 RVSEIKHLVDDMKAKGLVPKVDTYNILIKGLCDLKDFNGAYFWYREMVERGLLLNVSMCY 748

Query: 413 ALIHGF 418
            LI G 
Sbjct: 749 QLISGL 754


>gi|297805650|ref|XP_002870709.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297316545|gb|EFH46968.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 608

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 134/474 (28%), Positives = 221/474 (46%), Gaps = 5/474 (1%)

Query: 58  SLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNML-EKIALRDFLSTPSVL 116
           S +  FFKW +  +   + ++ ++  ++HIL  +K F  A   L E I L        V 
Sbjct: 92  SRALTFFKWVKFDL-GKRPNVGNYCLLLHILASSKKFPLAMQFLCELIELTSKKEEEDVF 150

Query: 117 NALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLA 176
           + LV   D+ + +  V   LV  Y  L + +DG   F ++        +  C  LLN L 
Sbjct: 151 SVLVSASDECNWDPVVFDMLVKGYLKLGLVEDGFSTFRKVIDSGFRVSVVTCNHLLNGLL 210

Query: 177 KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLF 236
           K  L +  W+VY  M ++G+  N + +N+L +  C +S+  +V+  L +ME +    DL 
Sbjct: 211 KLDLMEDCWQVYNVMCRVGIHPNTYTFNILTNVFCNNSNYGEVDDFLEKMEEEGFEPDLV 270

Query: 237 TYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI 296
           TYNTL++ YC++G   EA  +   M R  + PD+VTY SLI G C++GR+REA + F  +
Sbjct: 271 TYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRM 330

Query: 297 --KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRI 354
             +G  P+ ++Y TLI  YC+   ++++ +L   M    V P   T   I+    +EGR+
Sbjct: 331 VDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRL 390

Query: 355 RDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML-EAGLMLDQFTYKA 413
             A   + E+   K+      C+ LI + C+ G   +A  +  R+  E G      TY  
Sbjct: 391 LAAVNFVVELRRLKVIIPIEVCDFLIKSLCQEGKPFAAKHLLERISKEEGHEAKPETYNN 450

Query: 414 LIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
           LI   C    ++ A  L   + +        +Y  L+   C          L+ E +   
Sbjct: 451 LIESLCCCDAIEEALVLKGKLKNQNQVLDVKTYRALIGCLCRIGRNREAESLMAEMLDSE 510

Query: 474 LCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
           +  D  +  AL+ R+CK+   D A+ L +       + D++ Y SL  A    G
Sbjct: 511 VKPDSIICGALVNRYCKELDFDKAESLLSFFAMEFRIFDTLSYNSLVNALCETG 564



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/249 (23%), Positives = 103/249 (41%)

Query: 302 NHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLL 361
           + V +  L+ GY +   +E+       +   G    VVT N +L  L K   + D  ++ 
Sbjct: 163 DPVVFDMLVKGYLKLGLVEDGFSTFRKVIDSGFRVSVVTCNHLLNGLLKLDLMEDCWQVY 222

Query: 362 NEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKA 421
           N M    I P+  T N L N +C   +         +M E G   D  TY  L+  +C+ 
Sbjct: 223 NVMCRVGIHPNTYTFNILTNVFCNNSNYGEVDDFLEKMEEEGFEPDLVTYNTLVSSYCRR 282

Query: 422 KEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVY 481
             +  A  L   M      P   +Y+ L+ G C         +     V RG+  D   Y
Sbjct: 283 GRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSY 342

Query: 482 RALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
             LI  +CK+  +  +++L + M GN ++ D      +   + R G   A  + + ++ R
Sbjct: 343 NTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLAAVNFVVELRR 402

Query: 542 RRLMITLKI 550
            +++I +++
Sbjct: 403 LKVIIPIEV 411



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/190 (21%), Positives = 81/190 (42%)

Query: 372 DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
           D V  + L+  Y K+G          +++++G  +   T   L++G  K   M+   ++ 
Sbjct: 163 DPVVFDMLVKGYLKLGLVEDGFSTFRKVIDSGFRVSVVTCNHLLNGLLKLDLMEDCWQVY 222

Query: 432 FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
             M   G  P+  +++ L + +CN +N   +   L++    G   D+  Y  L+  +C++
Sbjct: 223 NVMCRVGIHPNTYTFNILTNVFCNNSNYGEVDDFLEKMEEEGFEPDLVTYNTLVSSYCRR 282

Query: 492 EKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIY 551
            ++  A  L+ +M    ++ D V YTSL     + G  +        M  R +      Y
Sbjct: 283 GRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSY 342

Query: 552 RSFSASYAKD 561
            +   +Y K+
Sbjct: 343 NTLIYAYCKE 352



 Score = 45.8 bits (107), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 42/76 (55%), Gaps = 5/76 (6%)

Query: 206 LIHACCKSSDVDKVEKLLC--EMEFKDVRADLFTYNTLIALYCKKGMHYE-ALAVQDRME 262
           L++  CK  D DK E LL    MEF+    D  +YN+L+   C+ G  Y+  L +Q+RM+
Sbjct: 521 LVNRYCKELDFDKAESLLSFFAMEFRIF--DTLSYNSLVNALCETGSGYDKVLDLQERMQ 578

Query: 263 REGISPDIVTYNSLIH 278
           R G  P+ +T   LI 
Sbjct: 579 RLGFVPNSLTCKYLIQ 594



 Score = 44.7 bits (104), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 39/173 (22%), Positives = 69/173 (39%), Gaps = 2/173 (1%)

Query: 407 DQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLL 466
           D   +  L+ G+ K   ++        ++D+GF  S  + + L++G    +  E   ++ 
Sbjct: 163 DPVVFDMLVKGYLKLGLVEDGFSTFRKVIDSGFRVSVVTCNHLLNGLLKLDLMEDCWQVY 222

Query: 467 DEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRA 526
           +     G+  +   +  L   FC              M+  G   D V Y +L  +Y R 
Sbjct: 223 NVMCRVGIHPNTYTFNILTNVFCNNSNYGEVDDFLEKMEEEGFEPDLVTYNTLVSSYCRR 282

Query: 527 GEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLF--WSHVVDRGL 577
           G  K    +   MYRRR++  L  Y S      KD  + +    +  +VDRG+
Sbjct: 283 GRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGI 335


>gi|224030417|gb|ACN34284.1| unknown [Zea mays]
 gi|413950072|gb|AFW82721.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
          Length = 647

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 132/490 (26%), Positives = 218/490 (44%), Gaps = 23/490 (4%)

Query: 67  AESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDP 126
                P    + ++H   +  L         Q  L+++ LR    T   L A V      
Sbjct: 44  GPPPAPGTGDAARAHEAAVRRLAAAGDVDGVQLALQEMRLRGVPCTEGALVAAVGAFARA 103

Query: 127 DGNSHVLSWLVIFYANLKMTQD-GLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVW 185
                 L     FY   +   D G     + R++N     H    L+++L ++ +   V 
Sbjct: 104 GAPDRALK---TFY---RAVHDLGCARPTEPRLYN-----H----LIDALLRENMVGAVV 148

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
            VY  M + GV  N+  YN+L+ A C+++ V    K+L EM  K    D  TY T++++ 
Sbjct: 149 LVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVL 208

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNH 303
           CK     EA  V   M      P   +YN+++   CRE RM+E   +  D+  +G  PN 
Sbjct: 209 CKLDRLDEATEVLAAMP-----PVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNV 263

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
           +TYTT++D +C+A +L  A  +   M   G  P VVT+ +++R L  +GR+ DA  +   
Sbjct: 264 ITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRW 323

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
           M  +  AP  V+ N LI   C +GD   A  + N M + G   +  TY  LI GF KA +
Sbjct: 324 MVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGD 383

Query: 424 MDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRA 483
           +  A  +   M  +G  P+   Y+ +VD +C K        L+D+ +      +   +  
Sbjct: 384 LGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNT 443

Query: 484 LIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRR 543
           LIR  C   +V  A  +F+ M+ +G + +   Y  L +  +R G       ++ +M    
Sbjct: 444 LIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHG 503

Query: 544 LMITLKIYRS 553
           + ++L  Y +
Sbjct: 504 IELSLVTYNT 513



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 106/429 (24%), Positives = 192/429 (44%), Gaps = 34/429 (7%)

Query: 84  MIHILTKNKHFKSAQNMLEKIALR----DFLSTPSVLNALVKIHDDPDGNSHVLSWLVIF 139
           ++  L +N    +A+ ML+++A +    D ++  ++++ L K+ D  D  + VL+     
Sbjct: 169 LVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKL-DRLDEATEVLA----- 222

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHAC-TVLLNSLAKDRLTDMVWKVYKKMVQLGVVA 198
                                 MP + A    ++ +L ++     V+ V   MV  G+  
Sbjct: 223 ---------------------AMPPVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQP 261

Query: 199 NIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQ 258
           N+  Y  ++ A CK+ ++     +L  M       ++ T+  L+      G  ++AL + 
Sbjct: 262 NVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMW 321

Query: 259 DRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRA 316
             M  EG +P  V+YN LI G C  G ++ A  +   ++  G  PN  TY+TLIDG+ +A
Sbjct: 322 RWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKA 381

Query: 317 NDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTC 376
            DL  A+ +   M+  G  P VV Y +++   CK+     A  L+++M  +   P+ VT 
Sbjct: 382 GDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTF 441

Query: 377 NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD 436
           NTLI + C       A+ V + M   G + +  TY  LIHG  +      A  ++  M  
Sbjct: 442 NTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQS 501

Query: 437 AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDY 496
            G   S  +Y+ +V G C        +  + + + +G+  +   + A+I  +CK+ +V  
Sbjct: 502 HGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRM 561

Query: 497 AQRLFNLMQ 505
           A  +   M 
Sbjct: 562 AAWMLGAMN 570



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 117/522 (22%), Positives = 238/522 (45%), Gaps = 22/522 (4%)

Query: 54  CHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSA-QNMLEKIALRDFLST 112
           C   +L  A   +A +  P+   +L++ +  +H L   +  +    N L    LR+    
Sbjct: 88  CTEGALVAAVGAFARAGAPD--RALKTFYRAVHDLGCARPTEPRLYNHLIDALLRE---- 141

Query: 113 PSVLNALVKIHDD--PDG-NSHVLSWLVIFYANLKMTQDGL--QVFDQMRVHNLMPHLHA 167
            +++ A+V ++D+   DG + +V ++ ++  A  +  + G   ++ D+M      P    
Sbjct: 142 -NMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVT 200

Query: 168 CTVLLNSLAK-DRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEM 226
              +++ L K DRL D   +V   M  +        YN ++ A C+   + +V  ++ +M
Sbjct: 201 YATIVSVLCKLDRL-DEATEVLAAMPPVAAS-----YNAIVLALCREFRMQEVFSVVSDM 254

Query: 227 EFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRM 286
             + ++ ++ TY T++  +CK G    A A+  RM   G +P++VT+ +L+ G   +GR+
Sbjct: 255 VGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRV 314

Query: 287 REARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSI 344
            +A  ++R +  +G  P+ V+Y  LI G C   DL+ A  +   M   G +P V TY+++
Sbjct: 315 HDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTL 374

Query: 345 LRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGL 404
           +    K G +  A  + N+M+     P+ V    +++ +CK      A  + ++ML    
Sbjct: 375 IDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENC 434

Query: 405 MLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLK 464
             +  T+  LI   C  + +  A  +   M   G  P+  +Y+ L+ G   + N    L 
Sbjct: 435 PPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALH 494

Query: 465 LLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYW 524
           ++ E  S G+ + +  Y  ++   C+      A      M   GI  ++  ++++ +AY 
Sbjct: 495 MVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYC 554

Query: 525 RAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
           + GE +  + +L  M        + +Y    A     ++++D
Sbjct: 555 KEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVD 596



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 97/363 (26%), Positives = 164/363 (45%), Gaps = 7/363 (1%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           +  +M +    P++   T L+  L  D        +++ MV  G   +   YN+LI   C
Sbjct: 285 ILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLC 344

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
              D+     +L  ME      ++ TY+TLI  + K G    A+++ + M R G  P++V
Sbjct: 345 SVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVV 404

Query: 272 TYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
            Y +++  FC++    +A+ L     ++   PN VT+ TLI   C    +  AL +   M
Sbjct: 405 VYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEM 464

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
              G  P   TYN ++  L +EG   DA  ++ EM    I    VT NT+++  C+   +
Sbjct: 465 RRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMS 524

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
             AM    +M+  G+  + FT+ A+IH +CK  E+ +A  +L  M       +   Y+ L
Sbjct: 525 REAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTIL 584

Query: 450 VDGYCNKNN----EEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRL-FNLM 504
           +   CN++        LLK+L E +         + R + R     E  D+ Q +  NL 
Sbjct: 585 MAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRGVFRNLGCIEPSDFIQHITMNLS 644

Query: 505 QGN 507
           +G 
Sbjct: 645 EGT 647



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 87/341 (25%), Positives = 143/341 (41%), Gaps = 36/341 (10%)

Query: 255 LAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF----RDIKGATPNHVT-YTTL 309
           LA+Q+ M   G+        + +  F R G    A + F     D+  A P     Y  L
Sbjct: 76  LALQE-MRLRGVPCTEGALVAAVGAFARAGAPDRALKTFYRAVHDLGCARPTEPRLYNHL 134

Query: 310 IDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI 369
           ID   R N +   + + + M   GV+P V TYN ++R LC+  R+  A ++L+EM  K  
Sbjct: 135 IDALLRENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGC 194

Query: 370 APDNVTCNTLINAYCKIGDTASAMKV--------------------KNRMLEA------- 402
            PD+VT  T+++  CK+     A +V                    + RM E        
Sbjct: 195 PPDDVTYATIVSVLCKLDRLDEATEVLAAMPPVAASYNAIVLALCREFRMQEVFSVVSDM 254

Query: 403 ---GLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNE 459
              GL  +  TY  ++  FCKA E+ +A  +L  M+  G +P+  +++ LV G  +    
Sbjct: 255 VGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRV 314

Query: 460 EALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
              L +    V+ G       Y  LIR  C    +  A  + N M+ +G   +   Y++L
Sbjct: 315 HDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTL 374

Query: 520 AYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAK 560
              + +AG+      I +DM R      + +Y +    + K
Sbjct: 375 IDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCK 415



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/244 (20%), Positives = 100/244 (40%), Gaps = 22/244 (9%)

Query: 59  LSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNA 118
           L  A   W + +    K ++  +  M+ +  K   F  A+++++K+ L +        N 
Sbjct: 384 LGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNT 443

Query: 119 LVKIHDD--------------------PDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRV 158
           L++   D                    P+G ++  + L+          D L +  +M+ 
Sbjct: 444 LIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTY--NELIHGLFREGNCGDALHMVTEMQS 501

Query: 159 HNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDK 218
           H +   L     +++ L + R++        KM+  G+  N   ++ +IHA CK  +V  
Sbjct: 502 HGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRM 561

Query: 219 VEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIH 278
              +L  M   +   ++  Y  L+A  C +    +A+    +M  EGI P+ VT+N L+ 
Sbjct: 562 AAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVR 621

Query: 279 GFCR 282
           G  R
Sbjct: 622 GVFR 625


>gi|449469290|ref|XP_004152354.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Cucumis sativus]
 gi|449484425|ref|XP_004156880.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Cucumis sativus]
          Length = 834

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 110/392 (28%), Positives = 200/392 (51%), Gaps = 2/392 (0%)

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           L+  Y      +   ++F ++++   +P L     L+N   K  + + +  +  +M   G
Sbjct: 249 LIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMFEAIDLLLLEMKDRG 308

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
           +  N+ +YN +I A  K     K +  L EM       DL TYNTLI  +C +G   EA 
Sbjct: 309 LSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTLINHFCSRGEVEEAE 368

Query: 256 AVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGY 313
            + ++  R G++P+ +TY  L+HG+C++G   +A     ++   G   + ++Y  LI G 
Sbjct: 369 KLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGLEVDMISYGALIHGL 428

Query: 314 CRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDN 373
             A +++ AL +R+ M  +G+ P    YN ++  L K+G++  A  +L EM ++ IAPD 
Sbjct: 429 VVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSMAKVMLTEMLDQNIAPDA 488

Query: 374 VTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFG 433
               TL++ + + G+   A K+   ++E GL      Y  +I GF K+  MD A   +  
Sbjct: 489 FVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFSKSGMMDNAILCIDK 548

Query: 434 MLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEK 493
           M  A   P   ++S ++DGY  ++N  A+LK+    V +    +V  Y +LI  +C+K +
Sbjct: 549 MRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQNCKPNVVTYTSLINGYCRKGE 608

Query: 494 VDYAQRLFNLMQGNGILGDSVIYTSLAYAYWR 525
              A++LF++M+ +G+    V Y+ L  ++ +
Sbjct: 609 TKMAEKLFSMMRSHGLKPSVVTYSILIGSFCK 640



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 128/511 (25%), Positives = 220/511 (43%), Gaps = 77/511 (15%)

Query: 131 HVLSWLVIFYANLKMTQDGLQVFDQM-RVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYK 189
             LS ++  YA++ +    L+V+  + ++HN +P  +AC  LLN L K R  +   ++Y 
Sbjct: 134 EALSDVLCAYADVGLVDKALEVYHGVVKLHNSLPSTYACNSLLNLLVKHRRIETAHQLYD 193

Query: 190 KMVQLG----VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
           +M+       +  + +  ++++   C    ++   KL+     K    ++  YNTLI  Y
Sbjct: 194 EMIDRDNGDDICVDNYTTSIMVKGLCLKGRIEDGIKLIESRWGKGCVPNIVFYNTLIDGY 253

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMR------------------ 287
           CKKG    A  +  +++ +G  P + T+ SL++GFC+ G                     
Sbjct: 254 CKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMFEAIDLLLLEMKDRGLSVNV 313

Query: 288 -------EAR-RLFRDIKG-----------ATPNHVTYTTLIDGYCRANDLEEALRLREV 328
                  +AR +L  DIK              P+ VTY TLI+ +C   ++EEA +L E 
Sbjct: 314 QMYNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTLINHFCSRGEVEEAEKLLEQ 373

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
              +G+ P  +TY  ++   CK+G    A   L EM+   +  D ++   LI+     G+
Sbjct: 374 TIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGLEVDMISYGALIHGLVVAGE 433

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
             +A+ +++RM+  G++ D   Y  L++G  K  ++ +AK +L  MLD   +P    Y+ 
Sbjct: 434 VDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSMAKVMLTEMLDQNIAPDAFVYAT 493

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYA----------- 497
           LVDG+    N +   KL    + +GL   V  Y  +I+ F K   +D A           
Sbjct: 494 LVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFSKSGMMDNAILCIDKMRRAH 553

Query: 498 ------------------------QRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACS 533
                                    ++F LM       + V YTSL   Y R GE K   
Sbjct: 554 HVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQNCKPNVVTYTSLINGYCRKGETKMAE 613

Query: 534 DILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
            +   M    L  ++  Y     S+ K+ ++
Sbjct: 614 KLFSMMRSHGLKPSVVTYSILIGSFCKEAKL 644



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 138/561 (24%), Positives = 236/561 (42%), Gaps = 86/561 (15%)

Query: 65  KWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHD 124
           +W +  VPN    +  + T+I    K    +SA  + +K+ ++ F+ T     +LV    
Sbjct: 234 RWGKGCVPN----IVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLV---- 285

Query: 125 DPDGNSHVLSWLVIFYANLKMTQDGLQV----------------FD--------QMRVHN 160
             +G   +  +  I    L+M   GL V                FD        +M  + 
Sbjct: 286 --NGFCKMGMFEAIDLLLLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENC 343

Query: 161 LMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVE 220
             P L     L+N        +   K+ ++ ++ G+  N   Y  L+H  CK  +  K  
Sbjct: 344 CEPDLVTYNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKAT 403

Query: 221 KLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGF 280
             L EM    +  D+ +Y  LI      G    AL ++DRM   GI PD   YN L++G 
Sbjct: 404 DYLIEMSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGL 463

Query: 281 CREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGV 338
            ++G++  A+ +  ++  +   P+   Y TL+DG+ R  +L+EA +L +++  KG+ PGV
Sbjct: 464 FKKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGV 523

Query: 339 VTYNSILRKLCKEG----------RIRDAN-------------------------RLLNE 363
           V YN +++   K G          ++R A+                         ++   
Sbjct: 524 VGYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGL 583

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
           M ++   P+ VT  +LIN YC+ G+T  A K+ + M   GL     TY  LI  FCK  +
Sbjct: 584 MVKQNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEAK 643

Query: 424 MDIAKELLFGMLDAGFSPSYCSYSWLVDGYCN----------KNNEEALLKLLDEFVSR- 472
           +  A      ML    +P+  ++ +LV+G+ N           N  E    + ++F SR 
Sbjct: 644 LGKAVSYFELMLINKCTPNDAAFHYLVNGFTNTKATAVSREPNNLHENSRSMFEDFFSRM 703

Query: 473 ---GLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEP 529
              G     + Y  ++   C++  V  A +L N M   G+  D+V + +L +     G  
Sbjct: 704 IGDGWTQKAAAYNCILICLCQQRMVKTALQLRNKMLAFGLCSDAVSFVALIHGICLEGNS 763

Query: 530 KACSDILD-DMYRRRLMITLK 549
           K   +++  D+    L I LK
Sbjct: 764 KEWRNMISCDLNEGELQIALK 784



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 114/456 (25%), Positives = 187/456 (41%), Gaps = 73/456 (16%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQL-GVVANIHLYNVLIHAC 210
             ++M+    +P   A + +L + A   L D   +VY  +V+L   + + +  N L++  
Sbjct: 120 TLEEMKTKETIPTREALSDVLCAYADVGLVDKALEVYHGVVKLHNSLPSTYACNSLLNLL 179

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
            K   ++   +L  EM                                DR   + I  D 
Sbjct: 180 VKHRRIETAHQLYDEM-------------------------------IDRDNGDDICVDN 208

Query: 271 VTYNSLIHGFCREGRMREARRLF--RDIKGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
            T + ++ G C +GR+ +  +L   R  KG  PN V Y TLIDGYC+  ++E A +L + 
Sbjct: 209 YTTSIMVKGLCLKGRIEDGIKLIESRWGKGCVPNIVFYNTLIDGYCKKGEVESAYKLFKK 268

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIA------------------ 370
           +  KG  P + T+ S++   CK G     + LL EM ++ ++                  
Sbjct: 269 LKMKGFIPTLQTFGSLVNGFCKMGMFEAIDLLLLEMKDRGLSVNVQMYNNIIDARYKLGF 328

Query: 371 -----------------PDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKA 413
                            PD VT NTLIN +C  G+   A K+  + +  GL  ++ TY  
Sbjct: 329 DIKAKDTLKEMSENCCEPDLVTYNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTP 388

Query: 414 LIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
           L+HG+CK  E   A + L  M  +G      SY  L+ G       +  L + D  ++RG
Sbjct: 389 LVHGYCKQGEYTKATDYLIEMSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRG 448

Query: 474 LCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACS 533
           +  D ++Y  L+    KK K+  A+ +   M    I  D+ +Y +L   + R G      
Sbjct: 449 ILPDANIYNVLMNGLFKKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAK 508

Query: 534 DILDDMYRRRLMITLKIY----RSFSASYAKDNEIL 565
            +   +  + L   +  Y    + FS S   DN IL
Sbjct: 509 KLFQLIIEKGLDPGVVGYNVMIKGFSKSGMMDNAIL 544



 Score = 85.1 bits (209), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 76/339 (22%), Positives = 136/339 (40%), Gaps = 51/339 (15%)

Query: 155 QMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSS 214
           +M   N+ P       L++   +    D   K+++ +++ G+   +  YNV+I    KS 
Sbjct: 478 EMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFSKSG 537

Query: 215 DVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYN 274
            +D     + +M       D+FT++T+I  Y K+      L +   M ++   P++VTY 
Sbjct: 538 MMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQNCKPNVVTYT 597

Query: 275 SLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAK 332
           SLI+G+CR+G  + A +LF  ++  G  P+ VTY+ LI  +C+   L +A+   E+M   
Sbjct: 598 SLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEAKLGKAVSYFELMLIN 657

Query: 333 GVYPG-------------------------------------------------VVTYNS 343
              P                                                     YN 
Sbjct: 658 KCTPNDAAFHYLVNGFTNTKATAVSREPNNLHENSRSMFEDFFSRMIGDGWTQKAAAYNC 717

Query: 344 ILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAG 403
           IL  LC++  ++ A +L N+M    +  D V+   LI+  C  G++     + +  L  G
Sbjct: 718 ILICLCQQRMVKTALQLRNKMLAFGLCSDAVSFVALIHGICLEGNSKEWRNMISCDLNEG 777

Query: 404 LMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
            +     Y   +  F     +  A  +L  M+    SP+
Sbjct: 778 ELQIALKYSLELDKFIPEGGISEASGILQAMIKGYVSPN 816


>gi|357517409|ref|XP_003628993.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523015|gb|AET03469.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 819

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 125/491 (25%), Positives = 232/491 (47%), Gaps = 21/491 (4%)

Query: 63  FFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTP--------- 113
           FF +A      ++ +++S+  +I +L  + H   A+  L+++ +    +TP         
Sbjct: 97  FFSFASKNF-KFRFTVRSYCILIRLLLASNHIPRAKFTLKRL-IEGNANTPLKKTDARLS 154

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
            + +A +++ +   G   +L +++               F       + P L +C  L++
Sbjct: 155 EIASAFLELGERSHGELDLLIYILCSQFQHLGFHWAFDTFMLFTSKGVFPSLKSCNFLMS 214

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
           SL K       ++V+  M + GV+ +++ Y   I+A CK   +D+   L  +M    V  
Sbjct: 215 SLVKSNELHKSFRVFDAMCRGGVLIDVYTYATAINAYCKGGKIDEAVGLFLKMGEGGVLP 274

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           ++ TYN LI   CK G   EAL  + RM    ++P +VTY  L++G  +  +  EA  + 
Sbjct: 275 NVVTYNNLIDGLCKSGRLEEALMFKGRMVENKVNPSLVTYGILVNGLVKFEKFDEANSVL 334

Query: 294 RDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
            ++  KG +PN   +  LIDGY R  ++++ALR+R+ M  KG+ P  VT+N++L+  C+ 
Sbjct: 335 VEMYSKGFSPNEFVFNALIDGYSRKGNMDDALRVRDDMTLKGLKPNAVTHNTLLQGFCRT 394

Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
            ++  A ++L  +    ++ +   C+ +++  CK     SA+K+   +L   + ++    
Sbjct: 395 NQMEQAEQVLEYLLSNVLSVNEDACSYVLHLLCKSSKFDSALKIVKALLLRNIKVNDSLL 454

Query: 412 KALIHGFCKAKEMDIAKELLFGMLD-AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFV 470
             L+ G CK  +   A +L F + D  G + +  + + L+ G C + N E +  +  E V
Sbjct: 455 TLLVCGLCKCGKHLEAIDLWFRLADKKGLAANTTTSNALLYGLCERGNMEEVFPVCKEMV 514

Query: 471 SRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPK 530
            RGL +D   Y  LI   CK  K++ A +L   M   G   D+  Y  L       G+  
Sbjct: 515 ERGLVLDGISYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGK-- 572

Query: 531 ACSDILDDMYR 541
                +DD+ R
Sbjct: 573 -----MDDVGR 578



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 121/491 (24%), Positives = 229/491 (46%), Gaps = 20/491 (4%)

Query: 77  SLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWL 136
           SL ++  +++ L K + F  A ++L ++  + F     V NAL+      DG        
Sbjct: 310 SLVTYGILVNGLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALI------DG-------- 355

Query: 137 VIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGV 196
              Y+      D L+V D M +  L P+      LL    +    +   +V + ++   +
Sbjct: 356 ---YSRKGNMDDALRVRDDMTLKGLKPNAVTHNTLLQGFCRTNQMEQAEQVLEYLLSNVL 412

Query: 197 VANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALA 256
             N    + ++H  CKSS  D   K++  +  ++++ +      L+   CK G H EA+ 
Sbjct: 413 SVNEDACSYVLHLLCKSSKFDSALKIVKALLLRNIKVNDSLLTLLVCGLCKCGKHLEAID 472

Query: 257 VQDRM-EREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGY 313
           +  R+ +++G++ +  T N+L++G C  G M E   + +++  +G   + ++Y TLI G 
Sbjct: 473 LWFRLADKKGLAANTTTSNALLYGLCERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGC 532

Query: 314 CRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDN 373
           C++  +EEA +L+E M  +G  P   TYN +++ L  +G++ D  R+L+E  +  + P+ 
Sbjct: 533 CKSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVGRVLHEAKDHGVVPNI 592

Query: 374 VTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFG 433
            T   ++  YC      +A+ + N+++   + L    Y  LI    KA     A +L   
Sbjct: 593 YTYALMLEGYCNADRIDNAVSLFNKLVYNKVELSYVVYNILIAAHSKAGNFTEAFKLRDA 652

Query: 434 MLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEK 493
           M  +   P+  +YS ++ G C  +  E    + +E  + GL  +V  Y ALI  +CK  +
Sbjct: 653 MRSSNIHPTIFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCYTALIGGYCKLGQ 712

Query: 494 VDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRS 553
           +D  + +   M  N I  + + YT +   Y + G  K  + +L++M    +      Y  
Sbjct: 713 MDQIESILQEMTSNCIQPNKITYTIMIDGYCKMGNTKEATKLLNEMIANGISPDTVTYTV 772

Query: 554 FSASYAKDNEI 564
               Y K+NE+
Sbjct: 773 LQKGYCKENEL 783



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 47/198 (23%), Positives = 85/198 (42%)

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
           K + P   +CN L+++  K  +   + +V + M   G+++D +TY   I+ +CK  ++D 
Sbjct: 200 KGVFPSLKSCNFLMSSLVKSNELHKSFRVFDAMCRGGVLIDVYTYATAINAYCKGGKIDE 259

Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
           A  L   M + G  P+  +Y+ L+DG C     E  L      V   +   +  Y  L+ 
Sbjct: 260 AVGLFLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEALMFKGRMVENKVNPSLVTYGILVN 319

Query: 487 RFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMI 546
              K EK D A  +   M   G   +  ++ +L   Y R G       + DDM  + L  
Sbjct: 320 GLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDALRVRDDMTLKGLKP 379

Query: 547 TLKIYRSFSASYAKDNEI 564
               + +    + + N++
Sbjct: 380 NAVTHNTLLQGFCRTNQM 397


>gi|125556563|gb|EAZ02169.1| hypothetical protein OsI_24261 [Oryza sativa Indica Group]
          Length = 991

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 129/510 (25%), Positives = 237/510 (46%), Gaps = 25/510 (4%)

Query: 23  KGHWAKLLNPNIASSLTSTAIHKV-LLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSH 81
           KG   K L P++      TA H   L    +    P+ + AFF+W  +    ++H+  SH
Sbjct: 41  KGRAYKRLAPSV------TAAHVADLFRAESTAPEPATALAFFEWL-ARRDGFRHTADSH 93

Query: 82  WTMIHILTKNKHFKSAQNMLEKI-----ALRDFLSTPSVLNAL-----VKIHDDPDGNSH 131
             ++H+L++ +     + ++  +        D   +   + A+      ++   P   + 
Sbjct: 94  AALLHLLSRRRAPAQYERLVVSMLNCSDTAEDMRVSADAIQAIRRTGSARLALSPKCYNF 153

Query: 132 VLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKM 191
            L  L    A   MT+   +V+ Q+    L+P       ++ S  K+       + ++ +
Sbjct: 154 ALRSL----ARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRCFRLL 209

Query: 192 VQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMH 251
           ++ G+       N L+   C++ ++ K   L   M     + + ++Y  LI   C+    
Sbjct: 210 LEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCEAKCV 269

Query: 252 YEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTL 309
            EAL +   M+R+G SP++  +  LI G C+ GR+ +AR LF  +   G  P+ +TY  +
Sbjct: 270 REALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAM 329

Query: 310 IDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI 369
           I GY +   + +AL+++E+M   G +P   TYN+++  LC + +  +A  LLN   ++  
Sbjct: 330 IVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQ-KTEEAEELLNNAVKEGF 388

Query: 370 APDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKE 429
            P  VT   LIN YC       A+++KN+M+ +   LD   +  LI+   K   +  AKE
Sbjct: 389 TPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKE 448

Query: 430 LLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFC 489
           LL  +   G  P+  +Y+ ++DGYC     +  L++L      G   +   Y +L+    
Sbjct: 449 LLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLV 508

Query: 490 KKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
           K +K+  A  L   MQ +GI+ + + YT+L
Sbjct: 509 KDKKLHKAMALLTKMQKDGIIPNVITYTTL 538



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 112/406 (27%), Positives = 197/406 (48%), Gaps = 6/406 (1%)

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           LV+ Y      +    +F  M +     + ++ T+L+  L + +       ++  M + G
Sbjct: 224 LVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCEAKCVREALVLFLMMKRDG 283

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
              N+  +  LI   CKS  V     L   M    V   + TYN +I  Y K G   +AL
Sbjct: 284 CSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDAL 343

Query: 256 AVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGY 313
            +++ ME+ G  PD  TYN+LI+G C + +  EA  L  +   +G TP  VT+T LI+GY
Sbjct: 344 KIKELMEKNGCHPDDWTYNTLIYGLCDQ-KTEEAEELLNNAVKEGFTPTVVTFTNLINGY 402

Query: 314 CRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDN 373
           C A   ++ALR++  M +      +  +  ++  L K+ R+++A  LLNE++   + P+ 
Sbjct: 403 CMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNV 462

Query: 374 VTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFG 433
           +T  ++I+ YCK G    A++V   M   G   + +TY +L++G  K K++  A  LL  
Sbjct: 463 ITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTK 522

Query: 434 MLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEK 493
           M   G  P+  +Y+ L+ G C++++ +   +L +     GL  D   Y  L    CK  +
Sbjct: 523 MQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGR 582

Query: 494 VDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
              A+  ++ +   G+    V YT+L   + +AG     + +++ M
Sbjct: 583 ---AEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERM 625



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 98/345 (28%), Positives = 163/345 (47%), Gaps = 38/345 (11%)

Query: 257 VQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYC 314
           V  ++ ++G+ PD VTYN++I  +C+EG +  A R FR +   G  P   T   L+ GYC
Sbjct: 170 VYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRCFRLLLEGGLEPETFTCNALVLGYC 229

Query: 315 RANDL-----------------------------------EEALRLREVMAAKGVYPGVV 339
           R  +L                                    EAL L  +M   G  P V 
Sbjct: 230 RTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVR 289

Query: 340 TYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRM 399
            +  ++  LCK GR+ DA  L + M +  + P  +T N +I  Y K+G    A+K+K  M
Sbjct: 290 AFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELM 349

Query: 400 LEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNE 459
            + G   D +TY  LI+G C  K  + A+ELL   +  GF+P+  +++ L++GYC     
Sbjct: 350 EKNGCHPDDWTYNTLIYGLCDQKTEE-AEELLNNAVKEGFTPTVVTFTNLINGYCMAEKF 408

Query: 460 EALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
           +  L++ ++ +S    +D+ V+  LI    KK+++  A+ L N +  NG++ + + YTS+
Sbjct: 409 DDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSI 468

Query: 520 AYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
              Y ++G+     ++L  M R         Y S      KD ++
Sbjct: 469 IDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKL 513



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 134/548 (24%), Positives = 218/548 (39%), Gaps = 74/548 (13%)

Query: 75  KHSLQSHWTMIHILTKNKHFKSAQNMLEKIA----LRDFLSTPSVLNALVKI-------- 122
           K  LQ    +I+ L K    K A+ +L +I+    + + ++  S+++   K         
Sbjct: 424 KLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALE 483

Query: 123 ------HDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLA 176
                  D    N+   + L+      K     + +  +M+   ++P++   T LL    
Sbjct: 484 VLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQC 543

Query: 177 KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLF 236
            +   D  +++++ M Q G+  + H Y VL  A CK+   ++    +     K V     
Sbjct: 544 DEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVR---KGVALTKV 600

Query: 237 TYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD- 295
            Y TLI  + K G    A  + +RM  EG +PD  TY+ L+H  C++ R+ EA  +    
Sbjct: 601 YYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQM 660

Query: 296 -IKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRI 354
            ++G       YT LID   R    + A R+   M + G  P   TY   +   CKEGR+
Sbjct: 661 SLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRL 720

Query: 355 RDANRLLNEMNEKKIAPDNVTCNTLIN--------------------------------- 381
            DA  L+ +M  + +APD VT N LI+                                 
Sbjct: 721 EDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLL 780

Query: 382 ---------AYCKIGDTAS---------AMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
                    AY +  DT+            ++  RM++ GL     TY +LI GFCKA  
Sbjct: 781 LKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGR 840

Query: 424 MDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRA 483
           ++ A  LL  M   G SP+   Y+ L+   C+    E  L  +      G    +  YR 
Sbjct: 841 LEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRL 900

Query: 484 LIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRR 543
           L+   C +   +  + LF  +   G   D V +  L     +AG    C  +L  M +R 
Sbjct: 901 LVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEKRY 960

Query: 544 LMITLKIY 551
             I+ + Y
Sbjct: 961 CCISSQTY 968



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 96/199 (48%)

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
           R+   +   G+ P  VTYN++++  CKEG +  A+R    + E  + P+  TCN L+  Y
Sbjct: 169 RVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRCFRLLLEGGLEPETFTCNALVLGY 228

Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY 443
           C+ G+   A  +   M   G   ++++Y  LI G C+AK +  A  L   M   G SP+ 
Sbjct: 229 CRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNV 288

Query: 444 CSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNL 503
            ++++L+ G C          L D     G+   V  Y A+I  + K  +++ A ++  L
Sbjct: 289 RAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKEL 348

Query: 504 MQGNGILGDSVIYTSLAYA 522
           M+ NG   D   Y +L Y 
Sbjct: 349 MEKNGCHPDDWTYNTLIYG 367



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 57/187 (30%), Positives = 88/187 (47%)

Query: 341 YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML 400
           YN  LR L +        R+ +++ +  + PD VT NT+I +YCK GD  +A +    +L
Sbjct: 151 YNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRCFRLLL 210

Query: 401 EAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEE 460
           E GL  + FT  AL+ G+C+  E+  A  L   M   G   +  SY+ L+ G C      
Sbjct: 211 EGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCEAKCVR 270

Query: 461 ALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLA 520
             L L       G   +V  +  LI   CK  +V  A+ LF+ M  NG++   + Y ++ 
Sbjct: 271 EALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMI 330

Query: 521 YAYWRAG 527
             Y + G
Sbjct: 331 VGYSKLG 337



 Score = 41.2 bits (95), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 1/74 (1%)

Query: 460 EALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
           E + ++  + V  GL  D   Y  +I+ +CK+  +  A R F L+   G+  ++    +L
Sbjct: 165 EYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRCFRLLLEGGLEPETFTCNAL 224

Query: 520 AYAYWRAGE-PKAC 532
              Y R GE  KAC
Sbjct: 225 VLGYCRTGELRKAC 238


>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 119/448 (26%), Positives = 210/448 (46%), Gaps = 11/448 (2%)

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
           Y  +   +  L++F ++      P +     LL++L  +    M+  +Y  M + G++ N
Sbjct: 119 YKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPN 178

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
           +  YN+L+ A CK+  VD   KL  EM  K    D  TY T+++  CK G   +A  +  
Sbjct: 179 VFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAG 238

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRAN 317
           R +     P +  YN+LI G C+EGR+  A +L  ++   G  PN V+Y+ +I+  C + 
Sbjct: 239 RFK-----PSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSG 293

Query: 318 DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCN 377
           ++E A  L   M  +G    + T+  +++     G++ +A  L   M +    P+ V  N
Sbjct: 294 NVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYN 353

Query: 378 TLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA 437
           TLI+  C  G    A++V ++M  +G + +  TY  LI GF K+ ++  A E    M+  
Sbjct: 354 TLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISH 413

Query: 438 GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYA 497
           G  P+  +Y+ +VD  C  +  +    L+++    G   +   +   I+  C   +V++A
Sbjct: 414 GCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWA 473

Query: 498 QRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSAS 557
            +L   MQG+G L +   Y  L  A +R  + +    +  ++  R L   L  Y +    
Sbjct: 474 MKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYG 533

Query: 558 YAKD---NEILDLFWSHVVDRGLMSKHI 582
           +++     E L LF   +V RG     I
Sbjct: 534 FSRAGMMGEALQLFGKALV-RGTAPDSI 560



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 100/377 (26%), Positives = 179/377 (47%), Gaps = 38/377 (10%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           +++  +M  + + P++ + + ++NSL      ++ + ++ +M   G  ANIH +  LI  
Sbjct: 264 IKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKG 323

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
           C     + +   L   M       ++  YNTLI   C  G   EAL V D+M+R G  P+
Sbjct: 324 CFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPN 383

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLRE 327
           + TY+ LI GF + G +  A   +  +   G  PN VTYT ++D  C+ +  ++A  L E
Sbjct: 384 VTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVE 443

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLL-------------------------- 361
            M  +G  P  +T+N+ ++ LC  GR+  A +LL                          
Sbjct: 444 KMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMN 503

Query: 362 ---------NEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYK 412
                     E+  + + P+ VT NT++  + + G    A+++  + L  G   D  TY 
Sbjct: 504 KYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYN 563

Query: 413 ALIHGFCKAKEMDIAKELLFGMLDAG-FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
            +IH +CK  ++ IA +L+  +     + P   +Y+ L+ G CN  N E  +  LD+ ++
Sbjct: 564 TMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAIN 623

Query: 472 RGLCVDVSVYRALIRRF 488
           +G+C + + + AL+R F
Sbjct: 624 QGICPNFATWNALVRCF 640



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 92/332 (27%), Positives = 165/332 (49%), Gaps = 14/332 (4%)

Query: 145 MTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYN 204
           M QDG +           P++ A   L++ L  +   +   +V  +M + G + N+  Y+
Sbjct: 340 MIQDGCE-----------PNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYS 388

Query: 205 VLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMERE 264
           +LI    KS D+    +    M     R ++ TY  ++ + CK  M  +A ++ ++M  E
Sbjct: 389 ILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLE 448

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIKG--ATPNHVTYTTLIDGYCRANDLEEA 322
           G +P+ +T+N+ I G C  GR+  A +L   ++G    PN  TY  L+D   R N  EEA
Sbjct: 449 GCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEA 508

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
             L + + A+ + P +VTYN++L    + G + +A +L  +   +  APD++T NT+I+A
Sbjct: 509 FGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHA 568

Query: 383 YCKIGDTASAMKVKNRMLEAG-LMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
           YCK G    A ++  R+        D  TY +LI G C    ++ A   L   ++ G  P
Sbjct: 569 YCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICP 628

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
           ++ +++ LV  + +       + +LD+ + +G
Sbjct: 629 NFATWNALVRCFFDSLGHMGPIHILDDILRKG 660



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 86/345 (24%), Positives = 136/345 (39%), Gaps = 46/345 (13%)

Query: 272 TYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           TY  +I    RE  M   + + + +K  G       +  +I+GY R    E+AL++   +
Sbjct: 76  TYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRI 135

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
              G  P V  YN +L  L  E + +  N L   M +  + P+  T N L+ A CK    
Sbjct: 136 GEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRV 195

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAG-FSPSYCSYSW 448
            +A K+   M   G   D  TY  ++   CKA ++D A+EL      AG F PS   Y+ 
Sbjct: 196 DAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDAREL------AGRFKPSVPVYNA 249

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF------- 501
           L+DG C +   E  +KLL E +  G+  +V  Y  +I   C    V+ A  LF       
Sbjct: 250 LIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRG 309

Query: 502 ----------------------------NLMQGNGILGDSVIYTSLAYAYWRAGEPKACS 533
                                        LM  +G   + V Y +L +     G  +   
Sbjct: 310 CDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEAL 369

Query: 534 DILDDMYRRRLMITLKIYRSFSASYAKDNEILDL--FWSHVVDRG 576
            + D M R   +  +  Y      +AK  +++     W+ ++  G
Sbjct: 370 QVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHG 414



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 49/225 (21%), Positives = 99/225 (44%), Gaps = 19/225 (8%)

Query: 75  KHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVK------------- 121
           + ++ ++  M+ +L KN  F  A +++EK+ L          N  +K             
Sbjct: 416 RPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMK 475

Query: 122 IHDDPDGNS---HVLSWLVIFYANLKMT--QDGLQVFDQMRVHNLMPHLHACTVLLNSLA 176
           + +   G+    ++ ++  +  A  +M   ++   +F ++   NL P+L     +L   +
Sbjct: 476 LLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFS 535

Query: 177 KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEM-EFKDVRADL 235
           +  +     +++ K +  G   +   YN +IHA CK   V    +L+  +   K+   D+
Sbjct: 536 RAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDI 595

Query: 236 FTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGF 280
            TY +LI   C      EA+A  D+   +GI P+  T+N+L+  F
Sbjct: 596 ITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCF 640


>gi|357115831|ref|XP_003559689.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like [Brachypodium distachyon]
          Length = 968

 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 139/496 (28%), Positives = 220/496 (44%), Gaps = 43/496 (8%)

Query: 86  HILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKM 145
            ILT+ K    A ++L+ +A+  F S  +V ++L+      D N  V   LV  Y   K 
Sbjct: 112 QILTQAKMHSQAMSLLKHLAMTGF-SCSAVFSSLLCTISRCDSNPLVFDLLVNAYVKEKR 170

Query: 146 TQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVW-------------------- 185
             D       M         HAC  +LN+L +   +  VW                    
Sbjct: 171 VVDASMAILFMDNCGFKASAHACNAVLNALVEIGESKHVWFFLKEGLVRKFPLDVTTCNI 230

Query: 186 -----------KVYKKMV---QLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDV 231
                      K  K M+   +   + N+  YN ++H   K         +L +ME   V
Sbjct: 231 VLNSMCIEGNLKGAKHMIHKMKSCSLPNVITYNTILHWYVKKGRFKAAMCVLEDMEKNGV 290

Query: 232 RADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARR 291
            AD++TYN +I   CK      A  +  RM  + ++PD  TYN+LI GF  E +M  A  
Sbjct: 291 EADVYTYNIMIDKLCKMKRSTHAYLLLKRMRGDNLAPDECTYNTLIKGFFDESKMMLAIH 350

Query: 292 LFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLC 349
           +F ++  +G  P+  TYTTLIDGYCR   ++EALR+   M   GV P  VTY+++L    
Sbjct: 351 IFNEMLRQGLKPSLATYTTLIDGYCRNGTIDEALRVLYEMQVAGVKPSEVTYSAML---- 406

Query: 350 KEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQF 409
             G + +A  + + M +   +PD  T   L+   CK G    A +  + ++     +DQ 
Sbjct: 407 -NGSVHEAFSVYDNMEKYGCSPDVYTYRNLLRGLCKGGHLVQAKEFMSCIVHIPSAIDQK 465

Query: 410 TYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEF 469
           T  AL+ G C    +D A +L   M+   F P   +Y+ L+ G+C K      + LL   
Sbjct: 466 TLNALLLGICNHGSLDEALDLCEKMVTINFIPDIHTYTILLSGFCRKGKIVPAVILLQMM 525

Query: 470 VSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN-LMQGNGILGDSVIYTSLAYAYWRAGE 528
           + +GL  D+  Y  L++   K+ +V  A  LF  ++   G+  D + Y S+   Y +AG+
Sbjct: 526 LEKGLVPDIVTYTCLLKGLIKEGQVKAASYLFQEIICKEGMYADCIAYNSMMNGYLKAGK 585

Query: 529 PKACSDILDDMYRRRL 544
                  + DM + ++
Sbjct: 586 LHKVEMTIYDMNQNKV 601



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 110/463 (23%), Positives = 206/463 (44%), Gaps = 40/463 (8%)

Query: 122 IHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLT 181
           +H     +   L+ L++   N     + L + ++M   N +P +H  T+LL+   +    
Sbjct: 456 VHIPSAIDQKTLNALLLGICNHGSLDEALDLCEKMVTINFIPDIHTYTILLSGFCRKGKI 515

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKD-VRADLFTYNT 240
                + + M++ G+V +I  Y  L+    K   V     L  E+  K+ + AD   YN+
Sbjct: 516 VPAVILLQMMLEKGLVPDIVTYTCLLKGLIKEGQVKAASYLFQEIICKEGMYADCIAYNS 575

Query: 241 LIALYCKKG-MHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--K 297
           ++  Y K G +H   + + D M +  + P+  +YN L+HG  ++G +  +  L++D+  K
Sbjct: 576 MMNGYLKAGKLHKVEMTIYD-MNQNKVYPNPASYNILMHGHIKKGHLSRSIYLYKDMVRK 634

Query: 298 GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDA 357
           G  P +VTY  LI G  +   +E A++  + M  +G+YP  ++++ ++    ++ R+ DA
Sbjct: 635 GIKPTNVTYRLLILGLSKHGMIEIAVKFLDKMVLEGIYPDRLSFDVLINAFSEKSRMSDA 694

Query: 358 NRLLN-----------------------------------EMNEKKIAPDNVTCNTLINA 382
            +L N                                   +M E  + P +     LINA
Sbjct: 695 LQLFNCMKWLYMSPSSKTYSAMINGLIRKNWLQHSCDVLRDMVESGLEPKHTHYIALINA 754

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
            C+ GD   A ++K  M   G++  +    +++ G  K  +++    +   ++ AG  P+
Sbjct: 755 KCRFGDINGAFRLKEEMTALGIVPAEVADSSIVRGLSKCGKVEEGIIVFCSIIRAGMVPT 814

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +++ L+ G C +      L L     S GL +DV  Y  LI   CK + V  A  L+ 
Sbjct: 815 IATFTTLMHGLCKEAKISDALHLKSLMESCGLKIDVVTYNVLITGLCKIQCVSDALELYE 874

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
            M+  G+  +   YT+L  A +  G       +L+D+  R L+
Sbjct: 875 EMKSKGLRPNVTTYTTLTEAIYGTGRTLEGEKLLNDIEDRGLV 917



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 121/518 (23%), Positives = 222/518 (42%), Gaps = 64/518 (12%)

Query: 65  KWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHD 124
           K    ++PN    + ++ T++H   K   FK+A  +LE +                   +
Sbjct: 250 KMKSCSLPN----VITYNTILHWYVKKGRFKAAMCVLEDME-----------------KN 288

Query: 125 DPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMV 184
             + + +  + ++     +K +     +  +MR  NL P       L+     +    + 
Sbjct: 289 GVEADVYTYNIMIDKLCKMKRSTHAYLLLKRMRGDNLAPDECTYNTLIKGFFDESKMMLA 348

Query: 185 WKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIAL 244
             ++ +M++ G+  ++  Y  LI   C++  +D+  ++L EM+   V+    TY+ ++  
Sbjct: 349 IHIFNEMLRQGLKPSLATYTTLIDGYCRNGTIDEALRVLYEMQVAGVKPSEVTYSAML-- 406

Query: 245 YCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI-------- 296
               G  +EA +V D ME+ G SPD+ TY +L+ G C+ G + +A+     I        
Sbjct: 407 ---NGSVHEAFSVYDNMEKYGCSPDVYTYRNLLRGLCKGGHLVQAKEFMSCIVHIPSAID 463

Query: 297 -------------------------KGATPNHV----TYTTLIDGYCRANDLEEALRLRE 327
                                    K  T N +    TYT L+ G+CR   +  A+ L +
Sbjct: 464 QKTLNALLLGICNHGSLDEALDLCEKMVTINFIPDIHTYTILLSGFCRKGKIVPAVILLQ 523

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKK-IAPDNVTCNTLINAYCKI 386
           +M  KG+ P +VTY  +L+ L KEG+++ A+ L  E+  K+ +  D +  N+++N Y K 
Sbjct: 524 MMLEKGLVPDIVTYTCLLKGLIKEGQVKAASYLFQEIICKEGMYADCIAYNSMMNGYLKA 583

Query: 387 GDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSY 446
           G           M +  +  +  +Y  L+HG  K   +  +  L   M+  G  P+  +Y
Sbjct: 584 GKLHKVEMTIYDMNQNKVYPNPASYNILMHGHIKKGHLSRSIYLYKDMVRKGIKPTNVTY 643

Query: 447 SWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQG 506
             L+ G       E  +K LD+ V  G+  D   +  LI  F +K ++  A +LFN M+ 
Sbjct: 644 RLLILGLSKHGMIEIAVKFLDKMVLEGIYPDRLSFDVLINAFSEKSRMSDALQLFNCMKW 703

Query: 507 NGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL 544
             +   S  Y+++     R    +   D+L DM    L
Sbjct: 704 LYMSPSSKTYSAMINGLIRKNWLQHSCDVLRDMVESGL 741



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 108/423 (25%), Positives = 191/423 (45%), Gaps = 3/423 (0%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
            +   V+D M  +   P ++    LL  L K        +    +V +    +    N L
Sbjct: 411 HEAFSVYDNMEKYGCSPDVYTYRNLLRGLCKGGHLVQAKEFMSCIVHIPSAIDQKTLNAL 470

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           +   C    +D+   L  +M   +   D+ TY  L++ +C+KG    A+ +   M  +G+
Sbjct: 471 LLGICNHGSLDEALDLCEKMVTINFIPDIHTYTILLSGFCRKGKIVPAVILLQMMLEKGL 530

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI---KGATPNHVTYTTLIDGYCRANDLEEAL 323
            PDIVTY  L+ G  +EG+++ A  LF++I   +G   + + Y ++++GY +A  L +  
Sbjct: 531 VPDIVTYTCLLKGLIKEGQVKAASYLFQEIICKEGMYADCIAYNSMMNGYLKAGKLHKVE 590

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
                M    VYP   +YN ++    K+G +  +  L  +M  K I P NVT   LI   
Sbjct: 591 MTIYDMNQNKVYPNPASYNILMHGHIKKGHLSRSIYLYKDMVRKGIKPTNVTYRLLILGL 650

Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY 443
            K G    A+K  ++M+  G+  D+ ++  LI+ F +   M  A +L   M     SPS 
Sbjct: 651 SKHGMIEIAVKFLDKMVLEGIYPDRLSFDVLINAFSEKSRMSDALQLFNCMKWLYMSPSS 710

Query: 444 CSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNL 503
            +YS +++G   KN  +    +L + V  GL    + Y ALI   C+   ++ A RL   
Sbjct: 711 KTYSAMINGLIRKNWLQHSCDVLRDMVESGLEPKHTHYIALINAKCRFGDINGAFRLKEE 770

Query: 504 MQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNE 563
           M   GI+   V  +S+     + G+ +    +   + R  ++ T+  + +      K+ +
Sbjct: 771 MTALGIVPAEVADSSIVRGLSKCGKVEEGIIVFCSIIRAGMVPTIATFTTLMHGLCKEAK 830

Query: 564 ILD 566
           I D
Sbjct: 831 ISD 833



 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 62/227 (27%), Positives = 110/227 (48%), Gaps = 2/227 (0%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
            D LQ+F+ M+   + P     + ++N L +         V + MV+ G+      Y  L
Sbjct: 692 SDALQLFNCMKWLYMSPSSKTYSAMINGLIRKNWLQHSCDVLRDMVESGLEPKHTHYIAL 751

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           I+A C+  D++   +L  EM    +       ++++    K G   E + V   + R G+
Sbjct: 752 INAKCRFGDINGAFRLKEEMTALGIVPAEVADSSIVRGLSKCGKVEEGIIVFCSIIRAGM 811

Query: 267 SPDIVTYNSLIHGFCREGRMREARRL--FRDIKGATPNHVTYTTLIDGYCRANDLEEALR 324
            P I T+ +L+HG C+E ++ +A  L    +  G   + VTY  LI G C+   + +AL 
Sbjct: 812 VPTIATFTTLMHGLCKEAKISDALHLKSLMESCGLKIDVVTYNVLITGLCKIQCVSDALE 871

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAP 371
           L E M +KG+ P V TY ++   +   GR  +  +LLN++ ++ + P
Sbjct: 872 LYEEMKSKGLRPNVTTYTTLTEAIYGTGRTLEGEKLLNDIEDRGLVP 918


>gi|297811615|ref|XP_002873691.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297319528|gb|EFH49950.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 938

 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 107/358 (29%), Positives = 191/358 (53%), Gaps = 8/358 (2%)

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
           D V  VY KM+  GV  ++   NVLIH+ CK   V ++   +  +  + +  D  TYNT+
Sbjct: 111 DQVSLVYSKMIACGVSPDVFALNVLIHSLCK---VGQLSFAISLLRNRVISVDTVTYNTV 167

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGATP 301
           I+  C+ G+  EA      M + GI PD V++N+LI GFC+ G    A+ L  +I  +  
Sbjct: 168 ISGLCEHGLADEAYQFLSEMVKIGILPDTVSFNTLIDGFCKVGNFARAKALVDEI--SEL 225

Query: 302 NHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLL 361
           N +T+T LI  Y   + +EEA R    M   G  P VVT++SI+ +LCK+G++ +   LL
Sbjct: 226 NLITHTILISSYYNLHAIEEAYR---DMVMSGFDPDVVTFSSIINRLCKDGKVMEGGLLL 282

Query: 362 NEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKA 421
            EM E  + P++VT  TL+++  K  D   A+ + ++M+  G+ +D   Y  L+ G  KA
Sbjct: 283 REMEEMGVYPNHVTYTTLVDSLFKAKDYRHALALYSQMVVRGIPVDLVVYTVLMAGLFKA 342

Query: 422 KEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVY 481
            ++  A++    +L+    P+  +Y+ LVDG C   +  +   ++ + + + +  +V  Y
Sbjct: 343 GDLREAEKTFKMLLEDNEVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVFPNVVTY 402

Query: 482 RALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
            ++I  + KK  ++ A  L   M+   ++ +   Y ++    ++AG+ +  S++  +M
Sbjct: 403 SSMINGYVKKGMLEEAVSLMRKMEDQNVVPNGFTYGTVIDGLFKAGKQEVASEMSKEM 460



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 111/424 (26%), Positives = 198/424 (46%), Gaps = 35/424 (8%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAK-DRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           V+ +M    + P + A  VL++SL K  +L+  +  +  +++ +  V     YN +I   
Sbjct: 116 VYSKMIACGVSPDVFALNVLIHSLCKVGQLSFAISLLRNRVISVDTVT----YNTVISGL 171

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDR---------- 260
           C+    D+  + L EM    +  D  ++NTLI  +CK G    A A+ D           
Sbjct: 172 CEHGLADEAYQFLSEMVKIGILPDTVSFNTLIDGFCKVGNFARAKALVDEISELNLITHT 231

Query: 261 ------------------MEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GAT 300
                             M   G  PD+VT++S+I+  C++G++ E   L R+++  G  
Sbjct: 232 ILISSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKDGKVMEGGLLLREMEEMGVY 291

Query: 301 PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRL 360
           PNHVTYTTL+D   +A D   AL L   M  +G+   +V Y  ++  L K G +R+A + 
Sbjct: 292 PNHVTYTTLVDSLFKAKDYRHALALYSQMVVRGIPVDLVVYTVLMAGLFKAGDLREAEKT 351

Query: 361 LNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCK 420
              + E    P+ VT   L++  CK GD +SA  +  +MLE  +  +  TY ++I+G+ K
Sbjct: 352 FKMLLEDNEVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVFPNVVTYSSMINGYVK 411

Query: 421 AKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSV 480
              ++ A  L+  M D    P+  +Y  ++DG      +E   ++  E    G+  +  +
Sbjct: 412 KGMLEEAVSLMRKMEDQNVVPNGFTYGTVIDGLFKAGKQEVASEMSKEMRLIGVEENNYI 471

Query: 481 YRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMY 540
             AL+    +  ++   + L   M   G+  D + YTSL   +++ G+ +A     ++M 
Sbjct: 472 LDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDHINYTSLIDVFFKGGDEEAALSWAEEMQ 531

Query: 541 RRRL 544
            + +
Sbjct: 532 EKEM 535



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 117/426 (27%), Positives = 200/426 (46%), Gaps = 12/426 (2%)

Query: 116 LNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSL 175
           L+ +VKI   PD  S   + L+  +  +        + D++   NL+ H    T+L++S 
Sbjct: 184 LSEMVKIGILPDTVS--FNTLIDGFCKVGNFARAKALVDEISELNLITH----TILISSY 237

Query: 176 AKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADL 235
                   + + Y+ MV  G   ++  ++ +I+  CK   V +   LL EME   V  + 
Sbjct: 238 YN---LHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKDGKVMEGGLLLREMEEMGVYPNH 294

Query: 236 FTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD 295
            TY TL+    K   +  ALA+  +M   GI  D+V Y  L+ G  + G +REA + F+ 
Sbjct: 295 VTYTTLVDSLFKAKDYRHALALYSQMVVRGIPVDLVVYTVLMAGLFKAGDLREAEKTFKM 354

Query: 296 I--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGR 353
           +      PN VTYT L+DG C+A DL  A  +   M  K V+P VVTY+S++    K+G 
Sbjct: 355 LLEDNEVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVFPNVVTYSSMINGYVKKGM 414

Query: 354 IRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKA 413
           + +A  L+ +M ++ + P+  T  T+I+   K G    A ++   M   G+  + +   A
Sbjct: 415 LEEAVSLMRKMEDQNVVPNGFTYGTVIDGLFKAGKQEVASEMSKEMRLIGVEENNYILDA 474

Query: 414 LIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
           L++   +   +   K L+  M+  G +  + +Y+ L+D +    +EEA L   +E   + 
Sbjct: 475 LVNHLKRIGRIKEVKGLVKDMVSKGVTLDHINYTSLIDVFFKGGDEEAALSWAEEMQEKE 534

Query: 474 LCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACS 533
           +  DV  Y  LI    K  KV  A   +  M+  GI  D   +  +  +  + G+ +   
Sbjct: 535 MPWDVVSYNVLISGLLKFGKVG-ADWAYKGMREKGIEPDIATFNIMMNSQRKQGDFEGIL 593

Query: 534 DILDDM 539
            + D M
Sbjct: 594 KLWDKM 599



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 89/326 (27%), Positives = 157/326 (48%), Gaps = 3/326 (0%)

Query: 132 VLSWLVIFYANLKMTQDGLQ-VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKK 190
           V+S+ V+    LK  + G    +  MR   + P +    +++NS  K    + + K++ K
Sbjct: 539 VVSYNVLISGLLKFGKVGADWAYKGMREKGIEPDIATFNIMMNSQRKQGDFEGILKLWDK 598

Query: 191 MVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGM 250
           M   G+  ++ + N+++   C+   + +   +L +M F ++  +L TY   + +  K   
Sbjct: 599 MKSCGIKPSLMICNIVVGMLCEKGKMKEAIDILDQMMFMEIHPNLTTYRIFLDMSSKHKR 658

Query: 251 HYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTT 308
                   + +   GI      YN+LI   C+ G  R+A  +  D+  +G  P+ VT+  
Sbjct: 659 ADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTRKAAMVMEDMEARGFVPDTVTFNA 718

Query: 309 LIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKK 368
           L+ GY   + + +AL    +M   G+ P V TYN+I+R L   G I++  + L+EM  + 
Sbjct: 719 LMHGYFVGSHVGKALSTYSMMMEAGISPNVATYNTIIRGLSDAGLIKEVEKWLSEMKSRG 778

Query: 369 IAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAK 428
           + PD+ T N LI+   KIG+   +M +   M+  GL+    TY  LI  F K  +M  A 
Sbjct: 779 MRPDDFTYNALISGQAKIGNKKESMTIYCEMIADGLVPKTSTYNVLISEFAKVGKMLQAT 838

Query: 429 ELLFGMLDAGFSPSYCSYSWLVDGYC 454
           EL+  M     SP+  +Y  ++ G C
Sbjct: 839 ELMKEMGKRRVSPNTSTYCTMISGLC 864



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 118/518 (22%), Positives = 233/518 (44%), Gaps = 67/518 (12%)

Query: 68  ESAVPNYKHSLQSHWTMIHILTKNKHFKSAQ----NMLEKIALRDFLSTPSVLNALVKIH 123
           ++ VPN    + ++  ++  L K     SA+     MLEK    + ++  S++N  VK  
Sbjct: 358 DNEVPN----VVTYTALVDGLCKAGDLSSAEFIITQMLEKSVFPNVVTYSSMINGYVK-- 411

Query: 124 DDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDM 183
                                M ++ + +  +M   N++P+      +++ L K    ++
Sbjct: 412 -------------------KGMLEEAVSLMRKMEDQNVVPNGFTYGTVIDGLFKAGKQEV 452

Query: 184 VWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIA 243
             ++ K+M  +GV  N ++ + L++   +   + +V+ L+ +M  K V  D   Y +LI 
Sbjct: 453 ASEMSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDHINYTSLID 512

Query: 244 LYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE--ARRLFRDIKGATP 301
           ++ K G    AL+  + M+ + +  D+V+YN LI G  + G++    A +  R+ KG  P
Sbjct: 513 VFFKGGDEEAALSWAEEMQEKEMPWDVVSYNVLISGLLKFGKVGADWAYKGMRE-KGIEP 571

Query: 302 NHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLL 361
           +  T+  +++   +  D E  L+L + M + G+ P ++  N ++  LC++G++++A  +L
Sbjct: 572 DIATFNIMMNSQRKQGDFEGILKLWDKMKSCGIKPSLMICNIVVGMLCEKGKMKEAIDIL 631

Query: 362 NEMNEKKIAPDNVT-----------------------------------CNTLINAYCKI 386
           ++M   +I P+  T                                    NTLI   CK+
Sbjct: 632 DQMMFMEIHPNLTTYRIFLDMSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKL 691

Query: 387 GDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSY 446
           G T  A  V   M   G + D  T+ AL+HG+     +  A      M++AG SP+  +Y
Sbjct: 692 GMTRKAAMVMEDMEARGFVPDTVTFNALMHGYFVGSHVGKALSTYSMMMEAGISPNVATY 751

Query: 447 SWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQG 506
           + ++ G  +    + + K L E  SRG+  D   Y ALI    K      +  ++  M  
Sbjct: 752 NTIIRGLSDAGLIKEVEKWLSEMKSRGMRPDDFTYNALISGQAKIGNKKESMTIYCEMIA 811

Query: 507 NGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL 544
           +G++  +  Y  L   + + G+    ++++ +M +RR+
Sbjct: 812 DGLVPKTSTYNVLISEFAKVGKMLQATELMKEMGKRRV 849



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 93/367 (25%), Positives = 159/367 (43%), Gaps = 34/367 (9%)

Query: 225 EMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREG 284
           ++     R  +  ++TL  LY   G  Y A      M   G+ PD+  +NSLIH F   G
Sbjct: 48  DLALNKTRVYVSLFHTLFRLYLSCGRLYGAARTLSAMCTFGVVPDLCLWNSLIHQFNVNG 107

Query: 285 RMREARRLFRDIK---GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTY 341
            + +   L        G +P+      LI   C+   L  A+ L   +  + +    VTY
Sbjct: 108 LVHDQVSLVYSKMIACGVSPDVFALNVLIHSLCKVGQLSFAISL---LRNRVISVDTVTY 164

Query: 342 NSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNR--- 398
           N+++  LC+ G   +A + L+EM +  I PD V+ NTLI+ +CK+G+ A A  + +    
Sbjct: 165 NTVISGLCEHGLADEAYQFLSEMVKIGILPDTVSFNTLIDGFCKVGNFARAKALVDEISE 224

Query: 399 -------------------------MLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFG 433
                                    M+ +G   D  T+ ++I+  CK  ++     LL  
Sbjct: 225 LNLITHTILISSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKDGKVMEGGLLLRE 284

Query: 434 MLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEK 493
           M + G  P++ +Y+ LVD      +    L L  + V RG+ VD+ VY  L+    K   
Sbjct: 285 MEEMGVYPNHVTYTTLVDSLFKAKDYRHALALYSQMVVRGIPVDLVVYTVLMAGLFKAGD 344

Query: 494 VDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRS 553
           +  A++ F ++  +  + + V YT+L     +AG+  +   I+  M  + +   +  Y S
Sbjct: 345 LREAEKTFKMLLEDNEVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVFPNVVTYSS 404

Query: 554 FSASYAK 560
               Y K
Sbjct: 405 MINGYVK 411



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 83/322 (25%), Positives = 143/322 (44%), Gaps = 9/322 (2%)

Query: 203 YNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRME 262
           YNVLI    K   V   +     M  K +  D+ T+N ++    K+G     L + D+M+
Sbjct: 542 YNVLISGLLKFGKVG-ADWAYKGMREKGIEPDIATFNIMMNSQRKQGDFEGILKLWDKMK 600

Query: 263 REGISPDIVTYNSLIHGFCREGRMREA-----RRLFRDIKGATPNHVTYTTLIDGYCRAN 317
             GI P ++  N ++   C +G+M+EA     + +F +I    PN  TY   +D   +  
Sbjct: 601 SCGIKPSLMICNIVVGMLCEKGKMKEAIDILDQMMFMEIH---PNLTTYRIFLDMSSKHK 657

Query: 318 DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCN 377
             +   +  E + + G+      YN+++  LCK G  R A  ++ +M  +   PD VT N
Sbjct: 658 RADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTRKAAMVMEDMEARGFVPDTVTFN 717

Query: 378 TLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA 437
            L++ Y        A+   + M+EAG+  +  TY  +I G   A  +   ++ L  M   
Sbjct: 718 ALMHGYFVGSHVGKALSTYSMMMEAGISPNVATYNTIIRGLSDAGLIKEVEKWLSEMKSR 777

Query: 438 GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYA 497
           G  P   +Y+ L+ G     N++  + +  E ++ GL    S Y  LI  F K  K+  A
Sbjct: 778 GMRPDDFTYNALISGQAKIGNKKESMTIYCEMIADGLVPKTSTYNVLISEFAKVGKMLQA 837

Query: 498 QRLFNLMQGNGILGDSVIYTSL 519
             L   M    +  ++  Y ++
Sbjct: 838 TELMKEMGKRRVSPNTSTYCTM 859



 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 80/311 (25%), Positives = 119/311 (38%), Gaps = 40/311 (12%)

Query: 62  AFFKWAESAVP-NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALV 120
           A FK  E+ +    K S Q + T+I  L K    + A  ++E +  R F+      NAL 
Sbjct: 661 AIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTRKAAMVMEDMEARGFVPDTVTFNAL- 719

Query: 121 KIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRL 180
            +H    G SHV                 L  +  M    + P++     ++  L+   L
Sbjct: 720 -MHGYFVG-SHV--------------GKALSTYSMMMEAGISPNVATYNTIIRGLSDAGL 763

Query: 181 TDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNT 240
              V K   +M   G+  +   YN LI    K  +  +   + CEM    +     TYN 
Sbjct: 764 IKEVEKWLSEMKSRGMRPDDFTYNALISGQAKIGNKKESMTIYCEMIADGLVPKTSTYNV 823

Query: 241 LIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGAT 300
           LI+ + K G   +A  +   M +  +SP+  TY ++I G C               K  T
Sbjct: 824 LISEFAKVGKMLQATELMKEMGKRRVSPNTSTYCTMISGLC---------------KLCT 868

Query: 301 PNHVTYTTLIDGYCRANDLEEALR-LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
              V +        +A  L EA   L+E++  KG  P   T   I     K G   DA R
Sbjct: 869 HPEVEWNK------KAMYLAEAKGLLKEMIEEKGYIPYNQTIYWISAAFSKPGMKVDAER 922

Query: 360 LLNEMNEKKIA 370
            L E  +KK A
Sbjct: 923 FLKECYKKKSA 933



 Score = 45.4 bits (106), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 50/236 (21%), Positives = 87/236 (36%), Gaps = 43/236 (18%)

Query: 338 VVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG---DTASAMK 394
           V  ++++ R     GR+  A R L+ M    + PD    N+LI+ +   G   D  S   
Sbjct: 58  VSLFHTLFRLYLSCGRLYGAARTLSAMCTFGVVPDLCLWNSLIHQFNVNGLVHDQVSL-- 115

Query: 395 VKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYC 454
           V ++M+  G+  D F    LIH  CK  ++  A  L                        
Sbjct: 116 VYSKMIACGVSPDVFALNVLIHSLCKVGQLSFAISL------------------------ 151

Query: 455 NKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSV 514
                           +R + VD   Y  +I   C+    D A +  + M   GIL D+V
Sbjct: 152 --------------LRNRVISVDTVTYNTVISGLCEHGLADEAYQFLSEMVKIGILPDTV 197

Query: 515 IYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWS 570
            + +L   + + G       ++D++    L+    +  S+   +A +    D+  S
Sbjct: 198 SFNTLIDGFCKVGNFARAKALVDEISELNLITHTILISSYYNLHAIEEAYRDMVMS 253


>gi|356532720|ref|XP_003534919.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g22470, mitochondrial-like [Glycine max]
          Length = 468

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 111/385 (28%), Positives = 184/385 (47%), Gaps = 4/385 (1%)

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
           P+    T L+  L        +   + K+V      N   Y  L++  CK+ +     KL
Sbjct: 78  PNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKL 137

Query: 223 LCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR 282
           L  +E +  R ++  Y+ +I   CK  +  EA  +   M+   I P+++TYN+LI  FC 
Sbjct: 138 LRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCL 197

Query: 283 EGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVT 340
            G++  A  L  +  +K   P+  T++ LID  C+    + A ++   M   GV P V +
Sbjct: 198 AGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEG--KNAKQIFHAMVQMGVNPNVYS 255

Query: 341 YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML 400
           YN ++  LCK  R+ +A  LL EM  K + PD VT N+LI+  CK G   SA+ + N M 
Sbjct: 256 YNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMH 315

Query: 401 EAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEE 460
             G   D  TY +L+   CK + +D A  L   M + G  P+  +Y+ L+DG C     +
Sbjct: 316 HRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLK 375

Query: 461 ALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLA 520
              +L    + +G C+DV  Y  +I   CK+   D A  + + M+ NG + ++V +  + 
Sbjct: 376 NAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIII 435

Query: 521 YAYWRAGEPKACSDILDDMYRRRLM 545
            + +   E      +L +M  + L+
Sbjct: 436 RSLFEKDENDKAEKLLHEMIAKGLL 460



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 105/343 (30%), Positives = 176/343 (51%), Gaps = 4/343 (1%)

Query: 171 LLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKD 230
           LLN L K   T    K+ + +       N+ +Y+ +I   CK   V++   L  EM+ ++
Sbjct: 121 LLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDARE 180

Query: 231 VRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREAR 290
           +  ++ TYNTLI  +C  G    A ++   M  + I+PD+ T++ LI   C+EG+   A+
Sbjct: 181 IFPNVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEGK--NAK 238

Query: 291 RLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
           ++F  +   G  PN  +Y  +I+G C+   ++EA+ L   M  K + P  VTYNS++  L
Sbjct: 239 QIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGL 298

Query: 349 CKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ 408
           CK GRI  A  L+NEM+ +    D VT  +L++A CK  +   A  +  +M E G+    
Sbjct: 299 CKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTM 358

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
           +TY ALI G CK   +  A+EL   +L  G      +Y+ ++ G C +   +  L +  +
Sbjct: 359 YTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSK 418

Query: 469 FVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILG 511
               G   +   +  +IR   +K++ D A++L + M   G+LG
Sbjct: 419 MEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLLG 461



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 123/425 (28%), Positives = 206/425 (48%), Gaps = 8/425 (1%)

Query: 171 LLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKD 230
           +L SL K +    V  + K+M   G+  N+   ++LI+  C    +     LL ++    
Sbjct: 16  ILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLGKILKLG 75

Query: 231 VRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREAR 290
              +  T+ TL+   C KG   + L   D++  +    + V+Y +L++G C+ G  R A 
Sbjct: 76  YXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETRCAI 135

Query: 291 RLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
           +L R I  +   PN V Y+ +IDG C+   + EA  L   M A+ ++P V+TYN+++   
Sbjct: 136 KLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAF 195

Query: 349 CKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ 408
           C  G++  A  LL+EM  K I PD  T + LI+A CK G  A   ++ + M++ G+  + 
Sbjct: 196 CLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEGKNAK--QIFHAMVQMGVNPNV 253

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
           ++Y  +I+G CK K +D A  LL  ML     P   +Y+ L+DG C      + L L++E
Sbjct: 254 YSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNE 313

Query: 469 FVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
              RG   DV  Y +L+   CK + +D A  LF  M+  GI      YT+L     + G 
Sbjct: 314 MHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGR 373

Query: 529 PKACSDILDDMYRRRLMITLKIYRSFSASYAKD---NEILDLFWSHVVDRGLMSKHIFKE 585
            K   ++   +  +   I +  Y    +   K+   +E L +  S + D G +   +  E
Sbjct: 374 LKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAI-KSKMEDNGCIPNAVTFE 432

Query: 586 MQLRN 590
           + +R+
Sbjct: 433 IIIRS 437



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/217 (23%), Positives = 98/217 (45%), Gaps = 17/217 (7%)

Query: 80  SHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIF 139
           S+  MI+ L K K    A N+L ++  ++ +      N+L+   D    +  + S     
Sbjct: 255 SYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLI---DGLCKSGRITS----- 306

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
                     L + ++M        +   T LL++L K++  D    ++ KM + G+   
Sbjct: 307 ---------ALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPT 357

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
           ++ Y  LI   CK   +   ++L   +  K    D++TY  +I+  CK+GM  EALA++ 
Sbjct: 358 MYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKS 417

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI 296
           +ME  G  P+ VT+  +I     +    +A +L  ++
Sbjct: 418 KMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEM 454


>gi|449443903|ref|XP_004139715.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Cucumis sativus]
 gi|449475521|ref|XP_004154479.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Cucumis sativus]
          Length = 660

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 143/508 (28%), Positives = 224/508 (44%), Gaps = 37/508 (7%)

Query: 84  MIHILTKNKHFKSAQNMLEKIALRDFLSTPS------VLNALVKI--------HDDPDGN 129
           +I++L K+    +A N+L+++ L +    P+      V N L+KI         D+  G 
Sbjct: 45  IINLLLKSGRVDNAMNVLDEMLLPESEFRPNDKTAGIVFNNLLKIDGLEGRVKEDEIAGL 104

Query: 130 SHVLSWLVIFYANLKMTQD------------GLQVFDQMRVHNLMPHLHACTVLLNSLAK 177
                   IF   + +TQ                + D + + N +     C  LL  L K
Sbjct: 105 VSKFGKHNIFPDTIALTQLISKLCRSGNTNLAWNILDNLMMLNGLKDAAPCNALLTGLGK 164

Query: 178 DRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKV----EKLLCEMEFKDV-- 231
            R    +  + +KM  + +   +  + +LI+  CK   +D      EK+  E E   V  
Sbjct: 165 AREFGKMNLLMRKMKDMNIQPTVITFGILINHLCKFRRIDDALEVFEKMKGEKEETKVFV 224

Query: 232 RADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARR 291
             D   YNTLI   CK G   EAL +  +M  +  +P   T+N LI+G+CR G +  A +
Sbjct: 225 APDTIMYNTLIDGLCKVGRQEEALCLMGKMRSDQCAPTTATFNCLINGYCRSGEIEVAHK 284

Query: 292 LFRDIKGAT--PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLC 349
           LF +++ A   PN +T  TL+DG C+ N +  A+    VM  KG+    VTY   +   C
Sbjct: 285 LFNEMENAQIEPNVITLNTLVDGMCKHNRISTAVEFFRVMQQKGLKGNNVTYTVFINAFC 344

Query: 350 KEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQF 409
               +  A   L+EM++    PD V   TLI    + G    A  V +++ EAG  LD+ 
Sbjct: 345 NVNNMNKAMEFLDEMSKDGCFPDAVVYYTLICGLAQAGRLDDASSVVSKLKEAGFCLDRV 404

Query: 410 TYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEF 469
            Y  LI  FCK  ++D A+E L  M  AG  P   +Y+ L+  +    N +   K + + 
Sbjct: 405 CYNVLISEFCKKNKLDRAQEWLNEMELAGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKM 464

Query: 470 VSR-GLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ--GNGILGDSVIYTSLAYAYWRA 526
               GL   V  Y ALI  +C    +D A ++F  M    + +  ++VIY  L  +  + 
Sbjct: 465 TEEEGLSPTVFTYGALIHAYCLNNNIDEAIKIFKEMNNVASKVPPNTVIYNILIDSLCKQ 524

Query: 527 GEPKACSDILDDMYRRRLMITLKIYRSF 554
            +      +LDDM  R +M     Y S 
Sbjct: 525 TQVNFALSLLDDMKFRGVMPNTTTYNSI 552



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 114/396 (28%), Positives = 185/396 (46%), Gaps = 46/396 (11%)

Query: 155 QMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKM------VQLGVVANIHLYNVLIH 208
           +M+  N+ P +    +L+N L K R  D   +V++KM       ++ V  +  +YN LI 
Sbjct: 177 KMKDMNIQPTVITFGILINHLCKFRRIDDALEVFEKMKGEKEETKVFVAPDTIMYNTLID 236

Query: 209 ACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISP 268
             CK    ++   L+ +M          T+N LI  YC+ G    A  + + ME   I P
Sbjct: 237 GLCKVGRQEEALCLMGKMRSDQCAPTTATFNCLINGYCRSGEIEVAHKLFNEMENAQIEP 296

Query: 269 DIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLR 326
           +++T N+L+ G C+  R+  A   FR +  KG   N+VTYT  I+ +C  N++ +A+   
Sbjct: 297 NVITLNTLVDGMCKHNRISTAVEFFRVMQQKGLKGNNVTYTVFINAFCNVNNMNKAMEFL 356

Query: 327 EVMAAKGVYPGVVTYNSILRKLCKEGRIRDA----------------------------- 357
           + M+  G +P  V Y +++  L + GR+ DA                             
Sbjct: 357 DEMSKDGCFPDAVVYYTLICGLAQAGRLDDASSVVSKLKEAGFCLDRVCYNVLISEFCKK 416

Query: 358 NRL------LNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEA-GLMLDQFT 410
           N+L      LNEM    + PD+VT NTLI+ + KIG+   A K   +M E  GL    FT
Sbjct: 417 NKLDRAQEWLNEMELAGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTEEEGLSPTVFT 476

Query: 411 YKALIHGFCKAKEMDIAKELLFGM--LDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
           Y ALIH +C    +D A ++   M  + +   P+   Y+ L+D  C +      L LLD+
Sbjct: 477 YGALIHAYCLNNNIDEAIKIFKEMNNVASKVPPNTVIYNILIDSLCKQTQVNFALSLLDD 536

Query: 469 FVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
              RG+  + + Y ++ +    K  +D A +L + M
Sbjct: 537 MKFRGVMPNTTTYNSIFKALRDKNWLDKAFKLMDRM 572



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 81/266 (30%), Positives = 127/266 (47%), Gaps = 5/266 (1%)

Query: 128 GNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKV 187
           GN+   +  +  + N+      ++  D+M      P       L+  LA+    D    V
Sbjct: 331 GNNVTYTVFINAFCNVNNMNKAMEFLDEMSKDGCFPDAVVYYTLICGLAQAGRLDDASSV 390

Query: 188 YKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCK 247
             K+ + G   +   YNVLI   CK + +D+ ++ L EME   V+ D  TYNTLI+ + K
Sbjct: 391 VSKLKEAGFCLDRVCYNVLISEFCKKNKLDRAQEWLNEMELAGVKPDSVTYNTLISYFSK 450

Query: 248 KGMHYEALAVQDRM-EREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGAT----PN 302
            G    A     +M E EG+SP + TY +LIH +C    + EA ++F+++        PN
Sbjct: 451 IGNFKLAHKFMKKMTEEEGLSPTVFTYGALIHAYCLNNNIDEAIKIFKEMNNVASKVPPN 510

Query: 303 HVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLN 362
            V Y  LID  C+   +  AL L + M  +GV P   TYNSI + L  +  +  A +L++
Sbjct: 511 TVIYNILIDSLCKQTQVNFALSLLDDMKFRGVMPNTTTYNSIFKALRDKNWLDKAFKLMD 570

Query: 363 EMNEKKIAPDNVTCNTLINAYCKIGD 388
            M E+   PD +T   L      +G+
Sbjct: 571 RMVEQACNPDYITMEILTEWLSAVGE 596



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 77/306 (25%), Positives = 148/306 (48%), Gaps = 5/306 (1%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           ++F++M    + P++     L++ + K        + ++ M Q G+  N   Y V I+A 
Sbjct: 284 KLFNEMENAQIEPNVITLNTLVDGMCKHNRISTAVEFFRVMQQKGLKGNNVTYTVFINAF 343

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           C  ++++K  + L EM       D   Y TLI    + G   +A +V  +++  G   D 
Sbjct: 344 CNVNNMNKAMEFLDEMSKDGCFPDAVVYYTLICGLAQAGRLDDASSVVSKLKEAGFCLDR 403

Query: 271 VTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALR-LRE 327
           V YN LI  FC++ ++  A+    +++  G  P+ VTY TLI  + +  + + A + +++
Sbjct: 404 VCYNVLISEFCKKNKLDRAQEWLNEMELAGVKPDSVTYNTLISYFSKIGNFKLAHKFMKK 463

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE--KKIAPDNVTCNTLINAYCK 385
           +   +G+ P V TY +++   C    I +A ++  EMN    K+ P+ V  N LI++ CK
Sbjct: 464 MTEEEGLSPTVFTYGALIHAYCLNNNIDEAIKIFKEMNNVASKVPPNTVIYNILIDSLCK 523

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
                 A+ + + M   G+M +  TY ++         +D A +L+  M++   +P Y +
Sbjct: 524 QTQVNFALSLLDDMKFRGVMPNTTTYNSIFKALRDKNWLDKAFKLMDRMVEQACNPDYIT 583

Query: 446 YSWLVD 451
              L +
Sbjct: 584 MEILTE 589



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 81/324 (25%), Positives = 132/324 (40%), Gaps = 26/324 (8%)

Query: 239 NTLIALYCKKGMHYEALAVQDRM---EREGISPDI---VTYNSLIHGFCREGRMREARRL 292
           N +I L  K G    A+ V D M   E E    D    + +N+L+     EGR++E    
Sbjct: 43  NEIINLLLKSGRVDNAMNVLDEMLLPESEFRPNDKTAGIVFNNLLKIDGLEGRVKED--- 99

Query: 293 FRDIKGAT---------PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNS 343
             +I G           P+ +  T LI   CR+ +   A  + + +            N+
Sbjct: 100 --EIAGLVSKFGKHNIFPDTIALTQLISKLCRSGNTNLAWNILDNLMMLNGLKDAAPCNA 157

Query: 344 ILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRM---- 399
           +L  L K       N L+ +M +  I P  +T   LIN  CK      A++V  +M    
Sbjct: 158 LLTGLGKAREFGKMNLLMRKMKDMNIQPTVITFGILINHLCKFRRIDDALEVFEKMKGEK 217

Query: 400 --LEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKN 457
              +  +  D   Y  LI G CK    + A  L+  M     +P+  +++ L++GYC   
Sbjct: 218 EETKVFVAPDTIMYNTLIDGLCKVGRQEEALCLMGKMRSDQCAPTTATFNCLINGYCRSG 277

Query: 458 NEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYT 517
             E   KL +E  +  +  +V     L+   CK  ++  A   F +MQ  G+ G++V YT
Sbjct: 278 EIEVAHKLFNEMENAQIEPNVITLNTLVDGMCKHNRISTAVEFFRVMQQKGLKGNNVTYT 337

Query: 518 SLAYAYWRAGEPKACSDILDDMYR 541
               A+          + LD+M +
Sbjct: 338 VFINAFCNVNNMNKAMEFLDEMSK 361


>gi|8920567|gb|AAF81289.1|AC027656_6 Contains similarity to a hypothetical protein F23N19.4 gi|6630464
           from Arabidopsis thaliana BAC F23N19 gb|AC007190. It
           contains a PPR repeat domain PF|01535 [Arabidopsis
           thaliana]
          Length = 797

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 137/522 (26%), Positives = 245/522 (46%), Gaps = 51/522 (9%)

Query: 59  LSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNA 118
           LS  FFK     +  ++HS  S   + H+L   + FK  Q +LE++   +   + S L  
Sbjct: 66  LSVWFFKELRD-IYAFRHSSFSTLLVSHVLAGQRRFKELQVILEQLLQEEGSGSASRLCE 124

Query: 119 LVKIHDDPDGNSHVLSW--LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNS-L 175
           L+  +      S  L W  L+   + L+M  D L +  +M+  NL    +  T   NS L
Sbjct: 125 LLS-NSFRKWESTGLVWDMLLFLSSRLRMVDDSLYILKKMKDQNL----NVSTQSYNSVL 179

Query: 176 AKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADL 235
              R TD +W VYK++       N H Y+ ++   C+   ++     L   E+KD+   +
Sbjct: 180 YHFRETDKMWDVYKEIKD----KNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSV 235

Query: 236 FTYNTLIALYCKKGMH-----------------------------------YEALAVQDR 260
            ++N++++ YCK G                                      EAL +   
Sbjct: 236 VSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASD 295

Query: 261 MEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRAND 318
           M + G+ PD VTYN L  GF   G +  A  + RD+  KG +P+ +TYT L+ G C+  +
Sbjct: 296 MNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGN 355

Query: 319 LEEALRLREVMAAKGV-YPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCN 377
           ++  L L + M ++G     ++  + +L  LCK GRI +A  L N+M    ++PD V  +
Sbjct: 356 IDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYS 415

Query: 378 TLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA 437
            +I+  CK+G    A+ + + M +  ++ +  T+ AL+ G C+   +  A+ LL  ++ +
Sbjct: 416 IVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISS 475

Query: 438 GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYA 497
           G +     Y+ ++DGY      E  L+L    +  G+   V+ + +LI  +CK + +  A
Sbjct: 476 GETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEA 535

Query: 498 QRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
           +++ ++++  G+    V YT+L  AY   G  K+  ++  +M
Sbjct: 536 RKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREM 577



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 110/379 (29%), Positives = 181/379 (47%), Gaps = 14/379 (3%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           + L +F+QM+   L P L A +++++ L K    DM   +Y +M    ++ N   +  L+
Sbjct: 394 EALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALL 453

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
              C+   + +   LL  +       D+  YN +I  Y K G   EAL +   +   GI+
Sbjct: 454 LGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGIT 513

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRL 325
           P + T+NSLI+G+C+   + EAR++   IK  G  P+ V+YTTL+D Y    + +    L
Sbjct: 514 PSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDEL 573

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE------------MNEKKIAPDN 373
           R  M A+G+ P  VTY+ I + LC+  +  + N +L E            M  + I PD 
Sbjct: 574 RREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQ 633

Query: 374 VTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFG 433
           +T NT+I   C++   + A      M    L     TY  LI   C    +  A   ++ 
Sbjct: 634 ITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYS 693

Query: 434 MLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEK 493
           + +   S S  +Y+ L+  +C K + E  +KL  + + RG  V +  Y A+I R C++  
Sbjct: 694 LQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHL 753

Query: 494 VDYAQRLFNLMQGNGILGD 512
           V+ ++  F LM   GI  D
Sbjct: 754 VNESKFFFCLMLSQGISPD 772



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 110/426 (25%), Positives = 188/426 (44%), Gaps = 15/426 (3%)

Query: 143 LKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN-IH 201
           L M     +V   M    L P +   T+LL    +    DM   + K M+  G   N I 
Sbjct: 318 LGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSII 377

Query: 202 LYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRM 261
             +V++   CK+  +D+   L  +M+   +  DL  Y+ +I   CK G    AL + D M
Sbjct: 378 PCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEM 437

Query: 262 EREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDL 319
             + I P+  T+ +L+ G C++G + EAR L   +   G T + V Y  +IDGY ++  +
Sbjct: 438 CDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCI 497

Query: 320 EEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTL 379
           EEAL L +V+   G+ P V T+NS++   CK   I +A ++L+ +    +AP  V+  TL
Sbjct: 498 EEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTL 557

Query: 380 INAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKA------------KEMDIA 427
           ++AY   G+T S  +++  M   G+     TY  +  G C+             +  +  
Sbjct: 558 MDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKC 617

Query: 428 KELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRR 487
           K+ L  M   G  P   +Y+ ++   C   +       L+   SR L    + Y  LI  
Sbjct: 618 KQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDS 677

Query: 488 FCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMIT 547
            C    +  A      +Q   +      YT+L  A+   G+P+    +   +  R   ++
Sbjct: 678 LCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVS 737

Query: 548 LKIYRS 553
           ++ Y +
Sbjct: 738 IRDYSA 743



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 56/261 (21%), Positives = 115/261 (44%), Gaps = 14/261 (5%)

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           L+  Y   +   +  ++ D ++++ L P + + T L+++ A    T  + ++ ++M   G
Sbjct: 522 LIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEG 581

Query: 196 VVANIHLYNVLIHACCKSSD------------VDKVEKLLCEMEFKDVRADLFTYNTLIA 243
           +      Y+V+    C+                +K ++ L +ME + +  D  TYNT+I 
Sbjct: 582 IPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQ 641

Query: 244 LYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATP 301
             C+      A    + M+   +     TYN LI   C  G +R+A      ++    + 
Sbjct: 642 YLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSL 701

Query: 302 NHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLL 361
           +   YTTLI  +C   D E A++L   +  +G    +  Y++++ +LC+   + ++    
Sbjct: 702 SKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLVNESKFFF 761

Query: 362 NEMNEKKIAPDNVTCNTLINA 382
             M  + I+PD   C  +I +
Sbjct: 762 CLMLSQGISPDLDICEVMIKS 782


>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 119/448 (26%), Positives = 210/448 (46%), Gaps = 11/448 (2%)

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
           Y  +   +  L++F ++      P +     LL++L  +    M+  +Y  M + G++ N
Sbjct: 119 YKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPN 178

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
           +  YN+L+ A CK+  VD   KL  EM  K    D  TY T+++  CK G   +A  +  
Sbjct: 179 VFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAG 238

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRAN 317
           R +     P +  YN+LI G C+EGR+  A +L  ++   G  PN V+Y+ +I+  C + 
Sbjct: 239 RFK-----PSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSG 293

Query: 318 DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCN 377
           ++E A  L   M  +G    + T+  +++     G++ +A  L   M +    P+ V  N
Sbjct: 294 NVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYN 353

Query: 378 TLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA 437
           TLI+  C  G    A++V ++M  +G + +  TY  LI GF K+ ++  A E    M+  
Sbjct: 354 TLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISH 413

Query: 438 GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYA 497
           G  P+  +Y+ +VD  C  +  +    L+++    G   +   +   I+  C   +V++A
Sbjct: 414 GCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWA 473

Query: 498 QRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSAS 557
            +L   MQG+G L +   Y  L  A +R  + +    +  ++  R L   L  Y +    
Sbjct: 474 MKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYG 533

Query: 558 YAKD---NEILDLFWSHVVDRGLMSKHI 582
           +++     E L LF   +V RG     I
Sbjct: 534 FSRAGMMGEALQLFGKALV-RGTAPDSI 560



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 100/377 (26%), Positives = 179/377 (47%), Gaps = 38/377 (10%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           +++  +M  + + P++ + + ++NSL      ++ + ++ +M   G  ANIH +  LI  
Sbjct: 264 IKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKG 323

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
           C     + +   L   M       ++  YNTLI   C  G   EAL V D+M+R G  P+
Sbjct: 324 CFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPN 383

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLRE 327
           + TY+ LI GF + G +  A   +  +   G  PN VTYT ++D  C+ +  ++A  L E
Sbjct: 384 VTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVE 443

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLL-------------------------- 361
            M  +G  P  +T+N+ ++ LC  GR+  A +LL                          
Sbjct: 444 KMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMN 503

Query: 362 ---------NEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYK 412
                     E+  + + P+ VT NT++  + + G    A+++  + L  G   D  TY 
Sbjct: 504 KYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYN 563

Query: 413 ALIHGFCKAKEMDIAKELLFGMLDAG-FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
            +IH +CK  ++ IA +L+  +     + P   +Y+ L+ G CN  N E  +  LD+ ++
Sbjct: 564 TMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAIN 623

Query: 472 RGLCVDVSVYRALIRRF 488
           +G+C + + + AL+R F
Sbjct: 624 QGICPNFATWNALVRCF 640



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 92/332 (27%), Positives = 165/332 (49%), Gaps = 14/332 (4%)

Query: 145 MTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYN 204
           M QDG +           P++ A   L++ L  +   +   +V  +M + G + N+  Y+
Sbjct: 340 MIQDGCE-----------PNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYS 388

Query: 205 VLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMERE 264
           +LI    KS D+    +    M     R ++ TY  ++ + CK  M  +A ++ ++M  E
Sbjct: 389 ILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLE 448

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIKG--ATPNHVTYTTLIDGYCRANDLEEA 322
           G +P+ +T+N+ I G C  GR+  A +L   ++G    PN  TY  L+D   R N  EEA
Sbjct: 449 GCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEA 508

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
             L + + A+ + P +VTYN++L    + G + +A +L  +   +  APD++T NT+I+A
Sbjct: 509 FGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHA 568

Query: 383 YCKIGDTASAMKVKNRMLEAG-LMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
           YCK G    A ++  R+        D  TY +LI G C    ++ A   L   ++ G  P
Sbjct: 569 YCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICP 628

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
           ++ +++ LV  + +       + +LD+ + +G
Sbjct: 629 NFATWNALVRCFFDSLGHMGPIHILDDILRKG 660



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 86/345 (24%), Positives = 136/345 (39%), Gaps = 46/345 (13%)

Query: 272 TYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           TY  +I    RE  M   + + + +K  G       +  +I+GY R    E+AL++   +
Sbjct: 76  TYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRI 135

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
              G  P V  YN +L  L  E + +  N L   M +  + P+  T N L+ A CK    
Sbjct: 136 GEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRV 195

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAG-FSPSYCSYSW 448
            +A K+   M   G   D  TY  ++   CKA ++D A+EL      AG F PS   Y+ 
Sbjct: 196 DAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDAREL------AGRFKPSVPVYNA 249

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF------- 501
           L+DG C +   E  +KLL E +  G+  +V  Y  +I   C    V+ A  LF       
Sbjct: 250 LIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRG 309

Query: 502 ----------------------------NLMQGNGILGDSVIYTSLAYAYWRAGEPKACS 533
                                        LM  +G   + V Y +L +     G  +   
Sbjct: 310 CDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEAL 369

Query: 534 DILDDMYRRRLMITLKIYRSFSASYAKDNEILDL--FWSHVVDRG 576
            + D M R   +  +  Y      +AK  +++     W+ ++  G
Sbjct: 370 QVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHG 414



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/225 (21%), Positives = 99/225 (44%), Gaps = 19/225 (8%)

Query: 75  KHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVK------------- 121
           + ++ ++  M+ +L KN  F  A +++EK+ L          N  +K             
Sbjct: 416 RPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMK 475

Query: 122 IHDDPDGNS---HVLSWLVIFYANLKMT--QDGLQVFDQMRVHNLMPHLHACTVLLNSLA 176
           + +   G+    ++ ++  +  A  +M   ++   +F ++   NL P+L     +L   +
Sbjct: 476 LLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFS 535

Query: 177 KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEM-EFKDVRADL 235
           +  +     +++ K +  G   +   YN +IHA CK   V    +L+  +   K+   D+
Sbjct: 536 RAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDI 595

Query: 236 FTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGF 280
            TY +LI   C      EA+A  D+   +GI P+  T+N+L+  F
Sbjct: 596 ITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCF 640


>gi|357141282|ref|XP_003572167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Brachypodium distachyon]
          Length = 686

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 111/379 (29%), Positives = 189/379 (49%), Gaps = 2/379 (0%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           V D+M    ++P     ++L +  ++   +  +  ++++ V+ GV    +  ++L++  C
Sbjct: 280 VLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLC 339

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           K   + K E++L  +    +      YNTLI  YC+ G    A ++  +M+   I PD +
Sbjct: 340 KDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHI 399

Query: 272 TYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           TYN+LI+G  +  R+ EA  L  +++  G  P+  T+ TLID Y RA  LE+   +   M
Sbjct: 400 TYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDM 459

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
             KG+ P VV+Y SI+   CK G+I +A  +L++M  K + P     N +I+AY + G T
Sbjct: 460 QEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGST 519

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
             A  +  +M  +G+     TY  LI G CK  ++  A+ELL  + + G +P   SY+ L
Sbjct: 520 DQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTL 579

Query: 450 VDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGI 509
           +   C ++N +  L+L  E    G+      YR L        +V   + L+  M    +
Sbjct: 580 ISACCYRSNTDRALELEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMENLYQQMLDKDV 639

Query: 510 LGDSVIYTSLAYAYWRAGE 528
           +  S IY  +  AY + GE
Sbjct: 640 VPCSGIYNIMVDAYAKCGE 658



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 104/338 (30%), Positives = 178/338 (52%), Gaps = 3/338 (0%)

Query: 232 RADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI-SPDIVTYNSLIHGFCREGRMREAR 290
           R D FT+N  +      G   EA+ +  RM  +G  +P+  +YN +I G  + G   +A 
Sbjct: 149 RPDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFSYNVVIAGLWKAGTDCDAV 208

Query: 291 RLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
           +LF ++  K   PNH+TY T+IDG+ +  DLE   RL   M   G+ P V+TYN +L  L
Sbjct: 209 KLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVITYNVLLSGL 268

Query: 349 CKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ 408
           C+ GR+ +   +L+EM  +K+ PD  T + L + + + GD+ + + +    ++ G+ +  
Sbjct: 269 CRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGA 328

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
           +T   L++G CK  ++  A+E+L  ++++G   +   Y+ L++GYC   + E    +  +
Sbjct: 329 YTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQ 388

Query: 469 FVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
             SR +  D   Y ALI    K E++  A  L   M+ NG+      + +L  AY RAG+
Sbjct: 389 MKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQ 448

Query: 529 PKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
            + C  IL DM  + L   +  Y S   ++ K+ +IL+
Sbjct: 449 LEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILE 486



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 109/332 (32%), Positives = 166/332 (50%), Gaps = 4/332 (1%)

Query: 199 NIHLYNVLIHACCKS-SDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAV 257
           N   YNV+I    K+ +D D V KL  EM  K V  +  TYNT+I  + KKG       +
Sbjct: 187 NAFSYNVVIAGLWKAGTDCDAV-KLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRL 245

Query: 258 QDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCR 315
             +M R G+ P+++TYN L+ G CR GRM E   +  ++  +   P+  TY+ L DG+ R
Sbjct: 246 WSQMLRHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSR 305

Query: 316 ANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVT 375
             D +  L L E    KGV  G  T + +L  LCK+G+I  A  +L  +    +    V 
Sbjct: 306 TGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVI 365

Query: 376 CNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGML 435
            NTLIN YC+IGD   A  +  +M    +  D  TY ALI+G  K + +  A +L+  M 
Sbjct: 366 YNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEME 425

Query: 436 DAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVD 495
             G +PS  +++ L+D Y      E    +L +   +GL  +V  Y +++  FCK  K+ 
Sbjct: 426 KNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKIL 485

Query: 496 YAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
            A  + + M    +L  + +Y ++  AY   G
Sbjct: 486 EAVAILDDMFIKDVLPGAQVYNAIIDAYIECG 517



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 110/402 (27%), Positives = 187/402 (46%), Gaps = 39/402 (9%)

Query: 112 TPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVL 171
           T +VL+ +      PDG ++  S L   ++    +Q  L +F++     +    + C++L
Sbjct: 277 TAAVLDEMASRKMVPDGFTY--SILFDGHSRTGDSQTMLSLFEESVKKGVKIGAYTCSIL 334

Query: 172 LNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVD-------------- 217
           LN L KD       +V + +V  G++    +YN LI+  C+  D++              
Sbjct: 335 LNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLI 394

Query: 218 ---------------KVEK------LLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALA 256
                          KVE+      L+ EME   V   + T+NTLI  Y + G   +   
Sbjct: 395 RPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFI 454

Query: 257 VQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYC 314
           +   M+ +G+ P++V+Y S+++ FC+ G++ EA  +  D  IK   P    Y  +ID Y 
Sbjct: 455 ILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYI 514

Query: 315 RANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNV 374
                ++A  L E M + GV P +VTYN +++ LCK+ +I +A  LL+ +    +APD +
Sbjct: 515 ECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVI 574

Query: 375 TCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGM 434
           + NTLI+A C   +T  A++++  M + G+     TY+ L      A  +   + L   M
Sbjct: 575 SYNTLISACCYRSNTDRALELEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMENLYQQM 634

Query: 435 LDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCV 476
           LD    P    Y+ +VD Y     E  +  L  E   +G+ V
Sbjct: 635 LDKDVVPCSGIYNIMVDAYAKCGEESKVEALRKEMSDKGIAV 676



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 103/433 (23%), Positives = 219/433 (50%), Gaps = 6/433 (1%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D +++FD+M    ++P+      +++   K    +  ++++ +M++ G+  N+  YNVL+
Sbjct: 206 DAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVITYNVLL 265

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
              C++  + +   +L EM  + +  D FTY+ L   + + G     L++ +   ++G+ 
Sbjct: 266 SGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVK 325

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
               T + L++G C++G++ +A  + + +   G     V Y TLI+GYC+  DLE A  +
Sbjct: 326 IGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSI 385

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
            + M ++ + P  +TYN+++  L K  RI +A+ L+ EM +  + P   T NTLI+AY +
Sbjct: 386 FQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGR 445

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            G       + + M E GL  +  +Y ++++ FCK  ++  A  +L  M      P    
Sbjct: 446 AGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQV 505

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+ ++D Y    + +    L ++  S G+   +  Y  LI+  CK+ ++  A+ L + ++
Sbjct: 506 YNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLR 565

Query: 506 GNGILGDSVIYTSLAYA-YWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
             G+  D + Y +L  A  +R+   +A  ++  +M++  +  + + YR   +S      +
Sbjct: 566 NYGLAPDVISYNTLISACCYRSNTDRAL-ELEKEMWKCGIKPSPRTYRMLFSSLGGAGRV 624

Query: 565 LDL--FWSHVVDR 575
            ++   +  ++D+
Sbjct: 625 HEMENLYQQMLDK 637



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 78/332 (23%), Positives = 135/332 (40%), Gaps = 86/332 (25%)

Query: 129 NSHVLSWLVIF------YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAK-DRLT 181
           NS +L   VI+      Y  +   +    +F QM+   + P       L+N L K +R+T
Sbjct: 356 NSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERIT 415

Query: 182 ---DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTY 238
              D+V ++ K     GV  ++  +N LI A  ++  ++K   +L +M+ K ++ ++ +Y
Sbjct: 416 EAHDLVIEMEKN----GVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSY 471

Query: 239 NTLIALYCKKGMHYEALAVQD-----------------------------------RMER 263
            +++  +CK G   EA+A+ D                                   +M+ 
Sbjct: 472 GSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKS 531

Query: 264 EGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEE 321
            G+ P IVTYN LI G C++ ++ EA  L   ++  G  P+ ++Y TLI   C  ++ + 
Sbjct: 532 SGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDR 591

Query: 322 ALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLN------------------- 362
           AL L + M   G+ P   TY  +   L   GR+ +   L                     
Sbjct: 592 ALELEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMENLYQQMLDKDVVPCSGIYNIMVD 651

Query: 363 ----------------EMNEKKIAPDNVTCNT 378
                           EM++K IA  + T  T
Sbjct: 652 AYAKCGEESKVEALRKEMSDKGIAVGDYTSMT 683


>gi|357125354|ref|XP_003564359.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 665

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 118/492 (23%), Positives = 230/492 (46%), Gaps = 38/492 (7%)

Query: 132 VLSWLVIFYANLKMTQDG--LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYK 189
           V+++ V+  A  K +  G  ++V D+MR     P++    V++N + ++   D   ++  
Sbjct: 172 VVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQILN 231

Query: 190 KMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKG 249
           ++   G   +   Y  ++   C +   + VE L CEM   +   +  T++ L+  +C+ G
Sbjct: 232 RLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGG 291

Query: 250 MHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYT 307
           M   A+ V DRM   G + +    N +I+  C++GR+ +A     ++   G +P+ ++YT
Sbjct: 292 MVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYT 351

Query: 308 TLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEK 367
           T++ G CRA   E+A  L   M  K   P  VT+N+ +  LC++G I  A  L+ +M E 
Sbjct: 352 TVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEY 411

Query: 368 KIAPDNVTCNTLINAYCKIGDTASAMKVKN------------------------------ 397
             +   VT N L+N +C  G   SA+++ N                              
Sbjct: 412 GCSVGIVTYNALVNGFCVQGRVDSALELFNSLPCEPNTITYTTLLTGLCHAERLDAAAEL 471

Query: 398 --RMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCN 455
              M++    L+  T+  L+  FC+   ++ A EL+  M++ G +P+  +++ L+DG   
Sbjct: 472 LAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITE 531

Query: 456 KNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVI 515
             N E  L+LL   VS+G+ +D   Y +++    ++++++ A ++F+ +Q  G+   +V+
Sbjct: 532 DCNSEEALELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMGMRPKAVM 591

Query: 516 YTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFW--SHVV 573
           Y  +  A  +  E     D    M     M     Y       A++  + +  +  S + 
Sbjct: 592 YNKILSALCKRCETDRAIDFFAHMVSNSCMPNESTYVILIEGLAREGLLKEARYVLSELC 651

Query: 574 DRGLMSKHIFKE 585
            RG++SK + ++
Sbjct: 652 SRGVLSKSLIED 663



 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 100/387 (25%), Positives = 188/387 (48%), Gaps = 1/387 (0%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N      LV F+    M +  ++V D+M  H    +   C +++NS+ K    D  ++  
Sbjct: 276 NEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFL 335

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
             M   G   +   Y  ++   C++   +  ++LL EM  K+   +  T+NT I + C+K
Sbjct: 336 NNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQK 395

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYTT 308
           G+  +A+ + ++M   G S  IVTYN+L++GFC +GR+  A  LF  +    PN +TYTT
Sbjct: 396 GLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSLP-CEPNTITYTT 454

Query: 309 LIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKK 368
           L+ G C A  L+ A  L   M        VVT+N ++   C++G + +A  L+ +M E  
Sbjct: 455 LLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHG 514

Query: 369 IAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAK 428
             P+ +T NTL++   +  ++  A+++ + ++  G+ LD  TY +++    +   ++ A 
Sbjct: 515 CTPNLITFNTLLDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAV 574

Query: 429 ELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRF 488
           ++   + D G  P    Y+ ++   C +   +  +      VS     + S Y  LI   
Sbjct: 575 QMFHAVQDMGMRPKAVMYNKILSALCKRCETDRAIDFFAHMVSNSCMPNESTYVILIEGL 634

Query: 489 CKKEKVDYAQRLFNLMQGNGILGDSVI 515
            ++  +  A+ + + +   G+L  S+I
Sbjct: 635 AREGLLKEARYVLSELCSRGVLSKSLI 661



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 118/445 (26%), Positives = 197/445 (44%), Gaps = 46/445 (10%)

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
           P ++ CT L+ +L +   T    +V +     G   ++  YN L+   C+   +D   +L
Sbjct: 68  PDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYNTLVAGYCRYGRLDAARRL 127

Query: 223 LCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR 282
           +  M    V  D +TY  LI   C +G   +AL++ D M R    P +VTY  L+   C+
Sbjct: 128 IASMP---VPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLEAVCK 184

Query: 283 EGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVT 340
                +A ++  ++  KG TPN VTY  +I+G CR + +++A ++   +++ G  P  V+
Sbjct: 185 SSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVS 244

Query: 341 YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML 400
           Y ++L+ LC   R  D   L  EM E    P+ VT + L+  +C+ G    A++V +RM 
Sbjct: 245 YTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMS 304

Query: 401 EAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEE 460
           E G   +      +I+  CK   +D A E L  M   G SP   SY+ ++ G C     E
Sbjct: 305 EHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWE 364

Query: 461 ALLKLLDEFVSR-----------------------------------GLCVDVSVYRALI 485
              +LL+E V +                                   G  V +  Y AL+
Sbjct: 365 DAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALV 424

Query: 486 RRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL- 544
             FC + +VD A  LFN +       +++ YT+L      A    A +++L +M +    
Sbjct: 425 NGFCVQGRVDSALELFNSLPCE---PNTITYTTLLTGLCHAERLDAAAELLAEMMQNDCP 481

Query: 545 --MITLKIYRSFSASYAKDNEILDL 567
             ++T  +  SF        E ++L
Sbjct: 482 LNVVTFNVLVSFFCQKGFVEEAIEL 506



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 100/203 (49%), Gaps = 3/203 (1%)

Query: 317 NDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTC 376
           +DL EA RL E   ++G  P V     ++R LC+ GR  DA R+L          D    
Sbjct: 49  DDLAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAY 108

Query: 377 NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD 436
           NTL+  YC+ G   +A ++   M    +  D +TY  LI G C    +  A  LL  ML 
Sbjct: 109 NTLVAGYCRYGRLDAARRLIASM---PVPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLR 165

Query: 437 AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDY 496
               PS  +Y+ L++  C  +     +K+LDE  ++G   ++  Y  +I   C++++VD 
Sbjct: 166 RECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDD 225

Query: 497 AQRLFNLMQGNGILGDSVIYTSL 519
           A+++ N +   G   D+V YT++
Sbjct: 226 ARQILNRLSSYGFQPDTVSYTTV 248



 Score = 47.4 bits (111), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 51/225 (22%), Positives = 80/225 (35%), Gaps = 38/225 (16%)

Query: 342 NSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLE 401
           +S LR+L     + +A RL+     +  APD   C  LI   C+ G T+ A +V      
Sbjct: 39  SSRLRRLIARDDLAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEG 98

Query: 402 AGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEA 461
           +G  +D F Y  L+ G                         YC Y  L          +A
Sbjct: 99  SGAPVDVFAYNTLVAG-------------------------YCRYGRL----------DA 123

Query: 462 LLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAY 521
             +L+    S  +  D   Y  LIR  C + +V  A  L + M         V YT L  
Sbjct: 124 ARRLI---ASMPVPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLE 180

Query: 522 AYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
           A  ++        +LD+M  +     +  Y        +++ + D
Sbjct: 181 AVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDD 225


>gi|186510147|ref|NP_188293.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274280|sp|Q9LUR2.1|PP238_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g16710, mitochondrial; Flags: Precursor
 gi|11994626|dbj|BAB02763.1| unnamed protein product [Arabidopsis thaliana]
 gi|332642334|gb|AEE75855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 507

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 123/423 (29%), Positives = 197/423 (46%), Gaps = 37/423 (8%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D L +F +M     +P +   T LL+ +AK    D+V  ++++M  LG+   +   N+++
Sbjct: 66  DALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVM 125

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           H  C SS              +  RA  F                       +M + G  
Sbjct: 126 HCVCLSS--------------QPCRASCFL---------------------GKMMKLGFE 150

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
           PD+VT+ SL++G+C   R+ +A  LF  I   G  PN VTYTTLI   C+   L  A+ L
Sbjct: 151 PDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVEL 210

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
              M   G  P VVTYN+++  LC+ GR  DA  LL +M +++I P+ +T   LI+A+ K
Sbjct: 211 FNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVK 270

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
           +G    A ++ N M++  +  D FTY +LI+G C    +D A+++ + M   G  P+   
Sbjct: 271 VGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVI 330

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+ L+ G+C     E  +K+  E   +G+  +   Y  LI+ +C   + D AQ +FN M 
Sbjct: 331 YTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMS 390

Query: 506 GNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEIL 565
                 D   Y  L       G+ +    I + M +R + I +  Y        K  ++ 
Sbjct: 391 SRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVE 450

Query: 566 DLF 568
           D F
Sbjct: 451 DAF 453



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 106/380 (27%), Positives = 184/380 (48%), Gaps = 2/380 (0%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           + +F+QM++  + P L  C ++++ +              KM++LG   ++  +  L++ 
Sbjct: 103 ISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNG 162

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
            C  + ++    L  ++     + ++ TY TLI   CK      A+ + ++M   G  P+
Sbjct: 163 YCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPN 222

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLRE 327
           +VTYN+L+ G C  GR  +A  L RD+  +   PN +T+T LID + +   L EA  L  
Sbjct: 223 VVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYN 282

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
           VM    VYP V TY S++  LC  G + +A ++   M      P+ V   TLI+ +CK  
Sbjct: 283 VMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSK 342

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
                MK+   M + G++ +  TY  LI G+C     D+A+E+   M      P   +Y+
Sbjct: 343 RVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYN 402

Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGN 507
            L+DG C     E  L + +    R + +++  Y  +I+  CK  KV+ A  LF  +   
Sbjct: 403 VLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSK 462

Query: 508 GILGDSVIYTSLAYAYWRAG 527
           G+  + + YT++   + R G
Sbjct: 463 GMKPNVITYTTMISGFCRRG 482



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 99/369 (26%), Positives = 182/369 (49%), Gaps = 4/369 (1%)

Query: 116 LNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSL 175
           L  ++K+  +PD  +   + L+  Y +    +D + +FDQ+      P++   T L+  L
Sbjct: 141 LGKMMKLGFEPDLVT--FTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCL 198

Query: 176 AKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADL 235
            K+R  +   +++ +M   G   N+  YN L+   C+         LL +M  + +  ++
Sbjct: 199 CKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNV 258

Query: 236 FTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF-- 293
            T+  LI  + K G   EA  + + M +  + PD+ TY SLI+G C  G + EAR++F  
Sbjct: 259 ITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYL 318

Query: 294 RDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGR 353
            +  G  PN V YTTLI G+C++  +E+ +++   M+ KGV    +TY  +++  C  GR
Sbjct: 319 MERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGR 378

Query: 354 IRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKA 413
              A  + N+M+ ++  PD  T N L++  C  G    A+ +   M +  + ++  TY  
Sbjct: 379 PDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTI 438

Query: 414 LIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
           +I G CK  +++ A +L   +   G  P+  +Y+ ++ G+C +        L  +    G
Sbjct: 439 IIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDG 498

Query: 474 LCVDVSVYR 482
              + SVY+
Sbjct: 499 FLPNESVYK 507



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 95/370 (25%), Positives = 170/370 (45%), Gaps = 25/370 (6%)

Query: 47  LLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIAL 106
           LLN Y  CH   +  A   + +     +K ++ ++ T+I  L KN+H   A  +  ++  
Sbjct: 159 LLNGY--CHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGT 216

Query: 107 RDFLSTPSVL--NALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPH 164
               S P+V+  NALV       G   +  W            D   +   M    + P+
Sbjct: 217 NG--SRPNVVTYNALVT------GLCEIGRW-----------GDAAWLLRDMMKRRIEPN 257

Query: 165 LHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLC 224
           +   T L+++  K        ++Y  M+Q+ V  ++  Y  LI+  C    +D+  ++  
Sbjct: 258 VITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFY 317

Query: 225 EMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREG 284
            ME      +   Y TLI  +CK     + + +   M ++G+  + +TY  LI G+C  G
Sbjct: 318 LMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVG 377

Query: 285 RMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYN 342
           R   A+ +F  +  + A P+  TY  L+DG C    +E+AL + E M  + +   +VTY 
Sbjct: 378 RPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYT 437

Query: 343 SILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEA 402
            I++ +CK G++ DA  L   +  K + P+ +T  T+I+ +C+ G    A  +  +M E 
Sbjct: 438 IIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKED 497

Query: 403 GLMLDQFTYK 412
           G + ++  YK
Sbjct: 498 GFLPNESVYK 507



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 99/227 (43%)

Query: 340 TYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRM 399
           +Y  ILR      +  DA  L   M   +  P  +    L++   K+      + +  +M
Sbjct: 50  SYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQM 109

Query: 400 LEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNE 459
              G+     T   ++H  C + +   A   L  M+  GF P   +++ L++GYC+ N  
Sbjct: 110 QILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRI 169

Query: 460 EALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
           E  + L D+ +  G   +V  Y  LIR  CK   +++A  LFN M  NG   + V Y +L
Sbjct: 170 EDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNAL 229

Query: 520 AYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
                  G     + +L DM +RR+   +  + +   ++ K  ++++
Sbjct: 230 VTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLME 276


>gi|222615488|gb|EEE51620.1| hypothetical protein OsJ_32898 [Oryza sativa Japonica Group]
          Length = 822

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 112/379 (29%), Positives = 182/379 (48%), Gaps = 2/379 (0%)

Query: 149 GLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIH 208
           GL +  +M     +P L     L+N L K    + +  ++ +M + G+  N+ +YN +I 
Sbjct: 258 GLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVID 317

Query: 209 ACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISP 268
           A CK     +   +L +M       D+ T+NTLI   C +G   +A        R  ++P
Sbjct: 318 ALCKCWSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNP 377

Query: 269 DIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLR 326
           + ++Y  LIHGFC  G +  A  L  ++  +G TP+ VT+  LI G   A  + EAL +R
Sbjct: 378 NQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVR 437

Query: 327 EVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKI 386
           E M  + V+P V  YN ++  LCK+  +  A  +L EM EK + PD     TLI+ + + 
Sbjct: 438 EKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRS 497

Query: 387 GDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSY 446
            +   A K+   M   G+  D  +  A+I G+C+   M  A   +  M   G  P   +Y
Sbjct: 498 ENLGDARKIFEFMEHKGVRPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTY 557

Query: 447 SWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQG 506
           + ++ GY  + N    L+ L + + R    +V  Y +LI  +CK    D A+ LF  MQ 
Sbjct: 558 TTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQA 617

Query: 507 NGILGDSVIYTSLAYAYWR 525
             +  + V YT L  + ++
Sbjct: 618 EALSPNVVTYTILIGSLFK 636



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 136/547 (24%), Positives = 251/547 (45%), Gaps = 31/547 (5%)

Query: 26  WAKLLNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQ-----S 80
           WA+ L   + S L+   +   + +L +    P L+ A   W++S  P++  +LQ     +
Sbjct: 47  WARSLAALLPSPLSDAHLAAAVSSLPD----PDLAVALLSWSQS--PDHHVALQDPTPLA 100

Query: 81  HWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFY 140
           H T++ +L +++ F +  + L+ ++L     T + L ALV                   Y
Sbjct: 101 HSTLLRLLARSRRFDAVDDTLQSMSLAGAAPTRACLGALVAA-----------------Y 143

Query: 141 ANLKMTQDGLQVFDQMR-VHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
           A+  M      + +++R  +  +P +  C  LL  L + R  D   K+Y +M+     A+
Sbjct: 144 ADAGMLGKATDMCERLREQYGSLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLGEDSGAD 203

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
            +   VL+   C    V++  KL+           +  YN LI  YC++G     L +  
Sbjct: 204 NYSTCVLVRGLCLEGRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLG 263

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRAN 317
            ME +G  P +VTY SLI+   ++G + +   LF +++  G +PN   Y ++ID  C+  
Sbjct: 264 EMEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCW 323

Query: 318 DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCN 377
              +A+ + + M A G  P ++T+N+++  LC EG +R A   L E   +++ P+ ++  
Sbjct: 324 SATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYT 383

Query: 378 TLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA 437
            LI+ +C  G+  +A  +   M+  G   D  T+ ALIHG   A ++  A  +   M + 
Sbjct: 384 PLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTER 443

Query: 438 GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYA 497
              P    Y+ L+ G C K+   A   +L+E + + +  D  VY  LI  F + E +  A
Sbjct: 444 QVFPDVNIYNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDA 503

Query: 498 QRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSAS 557
           +++F  M+  G+  D V   ++   Y + G        + +M +   +     Y +  + 
Sbjct: 504 RKIFEFMEHKGVRPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISG 563

Query: 558 YAKDNEI 564
           YAK   +
Sbjct: 564 YAKQGNL 570



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 95/330 (28%), Positives = 147/330 (44%), Gaps = 2/330 (0%)

Query: 239 NTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF--RDI 296
           N L+ L  ++    +A  + D M  E    D  +   L+ G C EGR+ E  +L   R  
Sbjct: 173 NRLLKLLVEQRRWDDARKLYDEMLGEDSGADNYSTCVLVRGLCLEGRVEEGLKLIEARWG 232

Query: 297 KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRD 356
            G  P+ V Y  LIDGYCR  D+   L L   M AKG  P +VTY S++  L K+G +  
Sbjct: 233 AGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEK 292

Query: 357 ANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIH 416
              L  EM ++ ++P+    N++I+A CK      AM +  +M  +G   D  T+  LI 
Sbjct: 293 IGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLIT 352

Query: 417 GFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCV 476
           G C    +  A+  L   +    +P+  SY+ L+ G+C +    A   LL E + RG   
Sbjct: 353 GLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTP 412

Query: 477 DVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDIL 536
           DV  + ALI       KV  A  +   M    +  D  IY  L     +     A  +IL
Sbjct: 413 DVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNIL 472

Query: 537 DDMYRRRLMITLKIYRSFSASYAKDNEILD 566
           ++M  + +     +Y +    + +   + D
Sbjct: 473 EEMLEKNVQPDEFVYATLIDGFIRSENLGD 502



 Score =  121 bits (304), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 86/325 (26%), Positives = 146/325 (44%), Gaps = 52/325 (16%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
            + L V ++M    + P ++   VL++ L K  +      + ++M++  V  +  +Y  L
Sbjct: 431 SEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATL 490

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           I    +S ++    K+   ME K VR D+ + N +I  YC+ GM  EA+     M + G 
Sbjct: 491 IDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGC 550

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
            PD  TY ++I G+ ++G +  A R   D+  +   PN VTY++LI+GYC+  D + A  
Sbjct: 551 IPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEG 610

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTL----- 379
           L   M A+ + P VVTY  ++  L K+ ++  A      M     +P++VT + L     
Sbjct: 611 LFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLT 670

Query: 380 ------INAYC---------------------KIGDTAS------------------AMK 394
                 IN+ C                      IGD  +                  A+ 
Sbjct: 671 SCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALD 730

Query: 395 VKNRMLEAGLMLDQFTYKALIHGFC 419
            KNRM + G + +  T+ +L++GFC
Sbjct: 731 FKNRMAKKGYVPNPITFLSLLYGFC 755



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 73/326 (22%), Positives = 142/326 (43%), Gaps = 40/326 (12%)

Query: 84  MIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANL 143
           +I  L K     +A+N+LE++  ++                 PD    V + L+  +   
Sbjct: 455 LISGLCKKHMLPAAKNILEEMLEKNV---------------QPD--EFVYATLIDGFIRS 497

Query: 144 KMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLY 203
           +   D  ++F+ M    + P + +C  ++    +  +          M ++G + +   Y
Sbjct: 498 ENLGDARKIFEFMEHKGVRPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTY 557

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER 263
             +I    K  +++   + LC+M  +  + ++ TY++LI  YCK G    A  +   M+ 
Sbjct: 558 TTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQA 617

Query: 264 EGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGY-----CRA 316
           E +SP++VTY  LI    ++ ++  A   F    +   +PN VT   L++G      C  
Sbjct: 618 EALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVI 677

Query: 317 NDL---------EEALRLREVMAAKGVY----PGVVTYNSILRKLCKEGRIRDANRLLNE 363
           N +         ++AL    V+  K V+    P    YN+I+  LC+   +R+A    N 
Sbjct: 678 NSICCNTSEVHGKDALL---VVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNR 734

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDT 389
           M +K   P+ +T  +L+  +C +G +
Sbjct: 735 MAKKGYVPNPITFLSLLYGFCSVGKS 760


>gi|449444222|ref|XP_004139874.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
 gi|449492651|ref|XP_004159061.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
          Length = 588

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 109/315 (34%), Positives = 164/315 (52%), Gaps = 8/315 (2%)

Query: 199 NIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQ 258
           +I  +N L+    K     +V  L  +M    +  DL T N LI   C      E LA  
Sbjct: 90  SIFSFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLNILINCLCNVNRINEGLAAM 149

Query: 259 DRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRA 316
             + R G  PD+VT+ +LI G C E R+ EA +LF  ++  G TPN VTY TLI G C  
Sbjct: 150 AGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCAL 209

Query: 317 NDLEEALRLREVM---AAKGVY---PGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIA 370
            ++  AL+  + M    +  V+   P V++Y+ I+  LCK G   +A  L NEM ++ + 
Sbjct: 210 GNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQ 269

Query: 371 PDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL 430
           P+ VT + LI+  CK G    A K+   M++ G++ + FTY +LI GFC   +++ AKEL
Sbjct: 270 PNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKEL 329

Query: 431 LFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCK 490
              M   G+ P   SY+ L++GYC     E  +KL +E +  G+  DV     L++    
Sbjct: 330 FVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFL 389

Query: 491 KEKVDYAQRLFNLMQ 505
             KVD A+ LF +++
Sbjct: 390 AGKVDDAKELFRVIK 404



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 120/457 (26%), Positives = 205/457 (44%), Gaps = 48/457 (10%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           Q FD M     M  + +   LL  LAK      V+ +YK+M   G+  ++   N+LI+  
Sbjct: 82  QFFDLM-----MRSIFSFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLNILINCL 136

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           C  + +++    +  +  +    D+ T+ TLI   C +    EA  +  RM++ G +P++
Sbjct: 137 CNVNRINEGLAAMAGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNV 196

Query: 271 VTYNSLIHGFCREGRMREARRLFRDIKGAT--------PNHVTYTTLIDGYCRANDLEEA 322
           VTY +LI G C  G +  A +  +++   T        PN ++Y+ +IDG C+  + EEA
Sbjct: 197 VTYGTLIKGLCALGNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEA 256

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
           + L   M  +GV P VVT++ ++  LCKEG++  A +LL  M +  I P+  T  +LI  
Sbjct: 257 ICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKG 316

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +C +GD  SA ++   M   G   D  +Y  LI+G+CK  +++ A +L   ML  G  P 
Sbjct: 317 FCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPD 376

Query: 443 Y-----------------------------------CSYSWLVDGYCNKNNEEALLKLLD 467
                                               C     +DG C        +KL +
Sbjct: 377 VKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFN 436

Query: 468 EFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
           E  S  + +D+  +  LI   CK  K++ A  LF  +   GI  D++ Y+S+ + + + G
Sbjct: 437 ELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKG 496

Query: 528 EPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
           +    + +   M        L  Y      + + N++
Sbjct: 497 QVDKANILFQKMEENGCSPDLITYSILMRGFYESNKL 533



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 106/354 (29%), Positives = 170/354 (48%), Gaps = 41/354 (11%)

Query: 198 ANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAV 257
            N+  Y+++I   CK  + ++   L  EM  + V+ ++ T++ LI + CK+G   +A  +
Sbjct: 235 PNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKL 294

Query: 258 QDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCR 315
            + M + GI P++ TY SLI GFC  G +  A+ LF  +  KG  P+ ++Y  LI+GYC+
Sbjct: 295 LEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCK 354

Query: 316 ANDLEEALRLREVMAAKGVYPGVVTYNSILRK---------------------------- 347
              +EEA++L   M   G++P V T   +L+                             
Sbjct: 355 TLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCI 414

Query: 348 -------LCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML 400
                  LCK G I +A +L NE+    +  D  T   LI+  CK G   +A ++  ++ 
Sbjct: 415 CCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLY 474

Query: 401 EAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEE 460
           E G+  D   Y ++IHGFCK  ++D A  L   M + G SP   +YS L+ G+   N  E
Sbjct: 475 EEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYESNKLE 534

Query: 461 ALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEK----VDYAQRLFNLMQGNGIL 510
            +++LL   + + +  D  +Y  +    CK EK    +D  QR F     NG L
Sbjct: 535 KVVQLLHRMIEKDVWPDDGIYAIVEDMVCKDEKYKEWLDLLQRFFVQKHRNGYL 588



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 101/381 (26%), Positives = 181/381 (47%), Gaps = 17/381 (4%)

Query: 91  NKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGL 150
           N   K  Q ML   +   F   P+V++  + I    DG   V +W           ++ +
Sbjct: 213 NIALKWHQEMLNDTSPYVFNCRPNVISYSIII----DGLCKVGNW-----------EEAI 257

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
            +F++M    + P++   +VL++ L K+       K+ + M+Q+G+V N+  Y  LI   
Sbjct: 258 CLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGF 317

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           C   D++  ++L   M  K    D+ +YN LI  YCK     EA+ + + M   G+ PD+
Sbjct: 318 CLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDV 377

Query: 271 VTYNSLIHGFCREGRMREARRLFRDIKG-ATPNHVTYTTL-IDGYCRANDLEEALRLREV 328
            T   L+      G++ +A+ LFR IK  A P  +    + +DG C+   + EA++L   
Sbjct: 378 KTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNE 437

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           + +  +   + T+  ++  LCK G++  A  L  ++ E+ I PD +  +++I+ +CK G 
Sbjct: 438 LESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQ 497

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
              A  +  +M E G   D  TY  L+ GF ++ +++   +LL  M++    P    Y+ 
Sbjct: 498 VDKANILFQKMEENGCSPDLITYSILMRGFYESNKLEKVVQLLHRMIEKDVWPDDGIYAI 557

Query: 449 LVDGYCNKNNEEALLKLLDEF 469
           + D  C     +  L LL  F
Sbjct: 558 VEDMVCKDEKYKEWLDLLQRF 578


>gi|356498873|ref|XP_003518272.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 566

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 131/476 (27%), Positives = 216/476 (45%), Gaps = 42/476 (8%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           ++G +  + M     +P + ACT L+    K   T    ++   + + G V + + YNVL
Sbjct: 86  EEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVIDANSYNVL 145

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           I+A CKS ++++  ++L   +   V  +  TY+ ++   C +G   +A+ V DR  +   
Sbjct: 146 INAYCKSGEIEEALRVL---DHTSVAPNAATYDAVLCSLCDRGKLKQAMQVLDRQLQSKC 202

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
            PD+VT   LI   C+E  + +A +LF ++  KG  P+ VTY  LI G+C+   L+EA+ 
Sbjct: 203 YPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLDEAII 262

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
             + + + G    V+++N ILR LC  GR  DA +LL  M  K   P  VT N LIN  C
Sbjct: 263 FLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNILINFLC 322

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKE--------------- 429
           + G    A+ V   M + G   +  ++  LI GFC  K +D A E               
Sbjct: 323 QKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIV 382

Query: 430 --------------------LLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEF 469
                               +L  +   G SPS  SY+ ++DG       E  ++LL+E 
Sbjct: 383 TYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEM 442

Query: 470 VSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEP 529
             +GL  D+    +++    ++ KV  A + F+ ++G GI  ++ IY S+     +A + 
Sbjct: 443 CYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNSIMMGLCKAQQT 502

Query: 530 KACSDILDDMYRRRLMITLKIYRSF--SASYAKDNEILDLFWSHVVDRGLMSKHIF 583
               D L DM       T   Y +     +Y    E      + +  RGL+ K + 
Sbjct: 503 SLAIDFLVDMVANGCKPTEASYTTLIKGITYEGLAEEASKLSNELYSRGLVKKSLI 558



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 93/208 (44%), Gaps = 2/208 (0%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           NS   + L+  + N K     ++  + M      P +    +LL +L KD   D    + 
Sbjct: 345 NSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVIL 404

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
            ++   G   ++  YN +I    K    +   +LL EM +K ++ DL T  +++    ++
Sbjct: 405 SQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSRE 464

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTY 306
           G  +EA+     ++  GI P+   YNS++ G C+  +   A     D+   G  P   +Y
Sbjct: 465 GKVHEAIKFFHYLKGFGIKPNAFIYNSIMMGLCKAQQTSLAIDFLVDMVANGCKPTEASY 524

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGV 334
           TTLI G       EEA +L   + ++G+
Sbjct: 525 TTLIKGITYEGLAEEASKLSNELYSRGL 552


>gi|222641578|gb|EEE69710.1| hypothetical protein OsJ_29377 [Oryza sativa Japonica Group]
          Length = 577

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 114/404 (28%), Positives = 195/404 (48%), Gaps = 17/404 (4%)

Query: 133 LSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMV 192
           L  LVI  + + +  + L VF ++R    +P L AC  +L+ L K  +   VW+++ +M+
Sbjct: 109 LGVLVIALSQMALPDEALSVFGRLRE---LPALPACNAILDGLVKAHMLARVWELFDEML 165

Query: 193 QLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHY 252
             G+V ++  YN LI+AC    DV K  ++  +M  + +  ++ TY T+I   C++    
Sbjct: 166 GRGMVPSVVTYNTLINACRHQGDVAKAWEVWDQMVARRIDPNVVTYTTMICALCEEDCIG 225

Query: 253 EALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLI 310
           +A  +   M+  G+ P++ TYN+L+    +   ++ A   + D+   G  PN V +TTLI
Sbjct: 226 DAEGLFLEMKEAGMRPNLYTYNALMSSHFKRDNIKHALVFYYDLLKCGLVPNDVIFTTLI 285

Query: 311 DGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIA 370
           DG C+AN + EA  +   M    V P V  YNS++    + G  ++A     E+  K + 
Sbjct: 286 DGLCQANRITEAKNIFLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIRKGLR 345

Query: 371 PDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL 430
           PD  TC+ ++   C       A+    RM E G+     TY +LI G  K  EM+IA  +
Sbjct: 346 PDEFTCSIVVRGLC------DALVTCTRMSEVGVEPHVVTYSSLIDGHSKNGEMEIAMAI 399

Query: 431 LFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCK 490
              M+  G  P+  +Y+ L+ G+    + +A   L  E   +G+  +      L+   C+
Sbjct: 400 YTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLVDGLCR 459

Query: 491 KEKVDYAQRLFNLMQG------NGILGDSVIYTSLAYAYWRAGE 528
           + +V  A R      G      N  + +SV Y +L Y  +  G+
Sbjct: 460 ENRVQDAVRFIMEYSGQKKSEKNPSIANSVTYMTLIYGLYIDGQ 503



 Score =  135 bits (339), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 114/420 (27%), Positives = 195/420 (46%), Gaps = 41/420 (9%)

Query: 38  LTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSA 97
           + S   +  L+N   C H   ++ A+  W +        ++ ++ TMI  L +      A
Sbjct: 170 VPSVVTYNTLIN--ACRHQGDVAKAWEVWDQMVARRIDPNVVTYTTMICALCEEDCIGDA 227

Query: 98  QNM---LEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFD 154
           + +   +++  +R  L T    NAL+  H   D   H L    +FY            +D
Sbjct: 228 EGLFLEMKEAGMRPNLYT---YNALMSSHFKRDNIKHAL----VFY------------YD 268

Query: 155 QMRVHNLMPHLHACTVLLNSLAK-DRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKS 213
            ++   L+P+    T L++ L + +R+T+    ++  M +  V   + +YN LIH   +S
Sbjct: 269 LLKC-GLVPNDVIFTTLIDGLCQANRITE-AKNIFLDMPRYEVAPTVPVYNSLIHGAFRS 326

Query: 214 SDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTY 273
               +      E+  K +R D FT + ++   C      +AL    RM   G+ P +VTY
Sbjct: 327 GYAQEALAFFQEIIRKGLRPDEFTCSIVVRGLC------DALVTCTRMSEVGVEPHVVTY 380

Query: 274 NSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAA 331
           +SLI G  + G M  A  ++ ++  KG  PN VTYT LI G+ +  D++ A  L++ M  
Sbjct: 381 SSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEE 440

Query: 332 KGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDN------VTCNTLINAYCK 385
           KG+Y   +T + ++  LC+E R++DA R + E + +K +  N      VT  TLI     
Sbjct: 441 KGIYSNAITVSVLVDGLCRENRVQDAVRFIMEYSGQKKSEKNPSIANSVTYMTLIYGLYI 500

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            G    A    + M ++G++ D+FTY  +I G C    +  A  L   M+  G  P+ C+
Sbjct: 501 DGQYNEACHFFSCMRDSGMVPDRFTYTLVIRGLCMLGYVLNAMMLYADMVKVGVKPTKCA 560



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 86/334 (25%), Positives = 152/334 (45%), Gaps = 13/334 (3%)

Query: 253 EALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLI 310
           EAL+V  R+ RE   P +   N+++ G  +   +     LF ++  +G  P+ VTY TLI
Sbjct: 124 EALSVFGRL-RE--LPALPACNAILDGLVKAHMLARVWELFDEMLGRGMVPSVVTYNTLI 180

Query: 311 DGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIA 370
           +      D+ +A  + + M A+ + P VVTY +++  LC+E  I DA  L  EM E  + 
Sbjct: 181 NACRHQGDVAKAWEVWDQMVARRIDPNVVTYTTMICALCEEDCIGDAEGLFLEMKEAGMR 240

Query: 371 PDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL 430
           P+  T N L++++ K  +   A+     +L+ GL+ +   +  LI G C+A  +  AK +
Sbjct: 241 PNLYTYNALMSSHFKRDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCQANRITEAKNI 300

Query: 431 LFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCK 490
              M     +P+   Y+ L+ G       +  L    E + +GL  D      ++R  C 
Sbjct: 301 FLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIRKGLRPDEFTCSIVVRGLCD 360

Query: 491 KEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKI 550
                 A      M   G+    V Y+SL   + + GE +    I  +M  + +   +  
Sbjct: 361 ------ALVTCTRMSEVGVEPHVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVT 414

Query: 551 YRSFSASYAKDNEILDLFW--SHVVDRGLMSKHI 582
           Y +    +AK+ ++   FW    + ++G+ S  I
Sbjct: 415 YTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAI 448


>gi|219363531|ref|NP_001137052.1| uncharacterized protein LOC100217224 [Zea mays]
 gi|194698168|gb|ACF83168.1| unknown [Zea mays]
          Length = 338

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 99/289 (34%), Positives = 161/289 (55%), Gaps = 3/289 (1%)

Query: 156 MRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSD 215
           MR H + P + +C V ++   + R  ++    +++M +  V  N++  N+++ A C    
Sbjct: 1   MRAHGMFPTVESCNVFISGALRLRRPEIAISFFREMRRCRVSPNVYTVNMVMRAKCALGR 60

Query: 216 VDKVEKLLCEMEFKDVRADLFTYNTLIALYC-KKGMHYEALAVQDRMEREGISPDIVTYN 274
           V    +LL EM          ++NTLIA YC   G     L +++RMEREG+ P+ VTYN
Sbjct: 61  VVDAAQLLDEMPCWGFSRTAASFNTLIAAYCHDSGGMETVLRLKERMEREGLVPNEVTYN 120

Query: 275 SLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAK 332
           +++HG C+EGRM +ARR+  +  +KG TPN +T+ TLI  Y    D E A+++ E M   
Sbjct: 121 TIVHGLCKEGRMHQARRIVNEMRVKGVTPNTITFNTLIHSYVTLGDNEVAMKMHEEMMKA 180

Query: 333 GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
           G+   +VTYN+++  LC EG+   A++L+ E+   K+ P+  T + LI   CK  +   A
Sbjct: 181 GLSADLVTYNALILGLCNEGKTWKASQLVQELCAAKLEPNASTFSALIIGQCKKQNPERA 240

Query: 393 MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
           + + N M +AG   + +TY  LI  F K K+ + A ++L  ML    +P
Sbjct: 241 LDLLNAMKKAGFQPNYYTYSILISTFSKNKDFEGAIDVLKDMLMRCIAP 289



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 88/247 (35%), Positives = 134/247 (54%), Gaps = 3/247 (1%)

Query: 254 ALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLID 311
           A++    M R  +SP++ T N ++   C  GR+ +A +L  ++   G +    ++ TLI 
Sbjct: 29  AISFFREMRRCRVSPNVYTVNMVMRAKCALGRVVDAAQLLDEMPCWGFSRTAASFNTLIA 88

Query: 312 GYCR-ANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIA 370
            YC  +  +E  LRL+E M  +G+ P  VTYN+I+  LCKEGR+  A R++NEM  K + 
Sbjct: 89  AYCHDSGGMETVLRLKERMEREGLVPNEVTYNTIVHGLCKEGRMHQARRIVNEMRVKGVT 148

Query: 371 PDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL 430
           P+ +T NTLI++Y  +GD   AMK+   M++AGL  D  TY ALI G C   +   A +L
Sbjct: 149 PNTITFNTLIHSYVTLGDNEVAMKMHEEMMKAGLSADLVTYNALILGLCNEGKTWKASQL 208

Query: 431 LFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCK 490
           +  +  A   P+  ++S L+ G C K N E  L LL+     G   +   Y  LI  F K
Sbjct: 209 VQELCAAKLEPNASTFSALIIGQCKKQNPERALDLLNAMKKAGFQPNYYTYSILISTFSK 268

Query: 491 KEKVDYA 497
            +  + A
Sbjct: 269 NKDFEGA 275



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 69/228 (30%), Positives = 114/228 (50%), Gaps = 3/228 (1%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLT-DMVWKVYKKMVQLGVVANIHLYNVL 206
           D  Q+ D+M          +   L+ +   D    + V ++ ++M + G+V N   YN +
Sbjct: 63  DAAQLLDEMPCWGFSRTAASFNTLIAAYCHDSGGMETVLRLKERMEREGLVPNEVTYNTI 122

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           +H  CK   + +  +++ EM  K V  +  T+NTLI  Y   G +  A+ + + M + G+
Sbjct: 123 VHGLCKEGRMHQARRIVNEMRVKGVTPNTITFNTLIHSYVTLGDNEVAMKMHEEMMKAGL 182

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDIKGA--TPNHVTYTTLIDGYCRANDLEEALR 324
           S D+VTYN+LI G C EG+  +A +L +++  A   PN  T++ LI G C+  + E AL 
Sbjct: 183 SADLVTYNALILGLCNEGKTWKASQLVQELCAAKLEPNASTFSALIIGQCKKQNPERALD 242

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPD 372
           L   M   G  P   TY+ ++    K      A  +L +M  + IAPD
Sbjct: 243 LLNAMKKAGFQPNYYTYSILISTFSKNKDFEGAIDVLKDMLMRCIAPD 290



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 73/285 (25%), Positives = 130/285 (45%), Gaps = 3/285 (1%)

Query: 261 MEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKG--ATPNHVTYTTLIDGYCRAND 318
           M   G+ P + + N  I G  R  R   A   FR+++    +PN  T   ++   C    
Sbjct: 1   MRAHGMFPTVESCNVFISGALRLRRPEIAISFFREMRRCRVSPNVYTVNMVMRAKCALGR 60

Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKE-GRIRDANRLLNEMNEKKIAPDNVTCN 377
           + +A +L + M   G      ++N+++   C + G +    RL   M  + + P+ VT N
Sbjct: 61  VVDAAQLLDEMPCWGFSRTAASFNTLIAAYCHDSGGMETVLRLKERMEREGLVPNEVTYN 120

Query: 378 TLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA 437
           T+++  CK G    A ++ N M   G+  +  T+  LIH +    + ++A ++   M+ A
Sbjct: 121 TIVHGLCKEGRMHQARRIVNEMRVKGVTPNTITFNTLIHSYVTLGDNEVAMKMHEEMMKA 180

Query: 438 GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYA 497
           G S    +Y+ L+ G CN+       +L+ E  +  L  + S + ALI   CKK+  + A
Sbjct: 181 GLSADLVTYNALILGLCNEGKTWKASQLVQELCAAKLEPNASTFSALIIGQCKKQNPERA 240

Query: 498 QRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRR 542
             L N M+  G   +   Y+ L   + +  + +   D+L DM  R
Sbjct: 241 LDLLNAMKKAGFQPNYYTYSILISTFSKNKDFEGAIDVLKDMLMR 285


>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
          Length = 700

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 106/406 (26%), Positives = 202/406 (49%), Gaps = 2/406 (0%)

Query: 122 IHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLT 181
           +HD P  N    + L+          +   + D+M  H+++P     ++L + L +   +
Sbjct: 256 LHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGES 315

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
             +  ++ + ++ GV+   +  ++L++  CK   V K +++   +    +      YNTL
Sbjct: 316 QTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTL 375

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GA 299
           I  YC+      A  + ++M+   I PD +TYN+LI+G C+   + +A  L  +++  G 
Sbjct: 376 INGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGV 435

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
            P+  T+ TLID Y  A  LE+   +   M  KG+   V+++ S+++  CK G+I +A  
Sbjct: 436 DPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVA 495

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
           +L++M  K +AP+    N++I+AY + GDT  A+ +  +M  +G+     TY  L+ G C
Sbjct: 496 ILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLC 555

Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
           ++ ++D A+EL++ + + G  P   SY+ ++   CNK + +  L+LL E    G+   + 
Sbjct: 556 RSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLR 615

Query: 480 VYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWR 525
               L+       +V   + L+  M    +   S IY  +  AY R
Sbjct: 616 TCHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVR 661



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 106/422 (25%), Positives = 208/422 (49%), Gaps = 2/422 (0%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D L+VFD+M    + P+      +++   K    +  +++  +M+  G   N+  YNVL+
Sbjct: 212 DALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLL 271

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
              C++  +D+   L+ EM    +  D FTY+ L     + G     L++     ++G+ 
Sbjct: 272 SGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVM 331

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
               T + L++G C++G++ +A+++F  +   G  P  V Y TLI+GYC+  DL  A  +
Sbjct: 332 LGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCI 391

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
            E M ++ + P  +TYN+++  LCK   +  A  L+ EM +  + P   T NTLI+AY  
Sbjct: 392 FEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGT 451

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            G       V + M + G+  D  ++ +++  FCK  ++  A  +L  M+    +P+   
Sbjct: 452 AGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQV 511

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+ ++D Y    + E  L L+++  + G+   +  Y  L++  C+  ++D A+ L   ++
Sbjct: 512 YNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLR 571

Query: 506 GNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEIL 565
             G+  D V Y ++  A    G+     ++L +M +  +  TL+   +  ++ A    + 
Sbjct: 572 NQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAGRVH 631

Query: 566 DL 567
           D+
Sbjct: 632 DM 633



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 104/337 (30%), Positives = 174/337 (51%), Gaps = 4/337 (1%)

Query: 232 RADLFTYNTLIALYCKKGMHYEALAVQDRMER-EGISP-DIVTYNSLIHGFCREGRMREA 289
           R D F +N ++      G    ALA+  RM R EG  P D  +YN +I G  R G+  +A
Sbjct: 154 RPDTFAWNKVVQACVAAGDLDVALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDA 213

Query: 290 RRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRK 347
            ++F ++   G  PN +TY T+IDG+ +  DLE   RLR+ M   G  P VVTYN +L  
Sbjct: 214 LKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSG 273

Query: 348 LCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLD 407
           LC+ GR+ +   L++EM    + PD  T + L +   + G++ + + +    L+ G+ML 
Sbjct: 274 LCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLG 333

Query: 408 QFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLD 467
            +T   L++G CK  ++  AK++   ++  G  P+   Y+ L++GYC   +      + +
Sbjct: 334 AYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFE 393

Query: 468 EFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
           +  SR +  D   Y ALI   CK E V  A+ L   M+ +G+      + +L  AY  AG
Sbjct: 394 QMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAG 453

Query: 528 EPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
           + + C  +L DM ++ +   +  + S   ++ K+ +I
Sbjct: 454 QLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKI 490



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 100/328 (30%), Positives = 164/328 (50%), Gaps = 2/328 (0%)

Query: 203 YNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRME 262
           YNV+I    +S       K+  EM    V  +  TYNT+I  + K G       ++D+M 
Sbjct: 197 YNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQML 256

Query: 263 REGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGAT--PNHVTYTTLIDGYCRANDLE 320
            +G  P++VTYN L+ G CR GRM E R L  ++   +  P+  TY+ L DG  R  + +
Sbjct: 257 HDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQ 316

Query: 321 EALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLI 380
             L L      KGV  G  T + +L  LCK+G++  A ++   +    + P  V  NTLI
Sbjct: 317 TMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLI 376

Query: 381 NAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFS 440
           N YC++ D   A  +  +M    +  D  TY ALI+G CK + +  A++L+  M  +G  
Sbjct: 377 NGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVD 436

Query: 441 PSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRL 500
           PS  +++ L+D Y      E    +L +   +G+  DV  + ++++ FCK  K+  A  +
Sbjct: 437 PSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAI 496

Query: 501 FNLMQGNGILGDSVIYTSLAYAYWRAGE 528
            + M    +  ++ +Y S+  AY  +G+
Sbjct: 497 LDDMIYKDVAPNAQVYNSIIDAYIESGD 524



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 117/415 (28%), Positives = 186/415 (44%), Gaps = 48/415 (11%)

Query: 100 MLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVH 159
           M E  AL D +++ S+L         PDG ++  S L         +Q  L +F +    
Sbjct: 280 MDETRALMDEMASHSML---------PDGFTY--SILFDGLTRTGESQTMLSLFAESLKK 328

Query: 160 NLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSD---- 215
            +M   + C++LLN L KD       +V++ +V  G+V    +YN LI+  C+  D    
Sbjct: 329 GVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGA 388

Query: 216 -------------------------------VDKVEKLLCEMEFKDVRADLFTYNTLIAL 244
                                          V K E L+ EME   V   + T+NTLI  
Sbjct: 389 FCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDA 448

Query: 245 YCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPN 302
           Y   G   +   V   M+++GI  D++++ S++  FC+ G++ EA  +  D+  K   PN
Sbjct: 449 YGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPN 508

Query: 303 HVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLN 362
              Y ++ID Y  + D E+AL L E M   GV   +VTYN +L+ LC+  +I +A  L+ 
Sbjct: 509 AQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIY 568

Query: 363 EMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAK 422
            +  + + PD V+ NT+I+A C  GDT  A+++   M + G+     T   L+     A 
Sbjct: 569 TLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAG 628

Query: 423 EMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVD 477
            +   + L   ML     PS   Y  +VD Y    N+  +  L  E   +G+  D
Sbjct: 629 RVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFD 683


>gi|357155349|ref|XP_003577091.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Brachypodium distachyon]
          Length = 877

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 111/373 (29%), Positives = 184/373 (49%), Gaps = 2/373 (0%)

Query: 149 GLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIH 208
           G+ +  +M    L+P +     L++ L +    + +  +  +M +  +  N+ +YN +I 
Sbjct: 313 GILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVID 372

Query: 209 ACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISP 268
           A CK     +   +L +M       D  T++TLI+  C++G   EA  +     R  ++P
Sbjct: 373 ALCKCRSASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNP 432

Query: 269 DIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLR 326
           ++ +Y SLIHGFC  G +  A  L  ++  +G TP+ VT+  LI G   A  + EAL +R
Sbjct: 433 NLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVR 492

Query: 327 EVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKI 386
           E MAA+ + P    YN ++  LCK+  +  A  L+ EM E+ + PD     TLI+ + + 
Sbjct: 493 EKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRN 552

Query: 387 GDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSY 446
                A K+   M + G+  D   Y A+I G+C+   M+ A E +  M   G  P   +Y
Sbjct: 553 ESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTY 612

Query: 447 SWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQG 506
           + L+ GY  + N    L LL + + R    +V  Y +LI  +CK    D A+ LF  M+ 
Sbjct: 613 TTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMES 672

Query: 507 NGILGDSVIYTSL 519
            G+  + + YT L
Sbjct: 673 QGLFPNVITYTIL 685



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 119/439 (27%), Positives = 203/439 (46%), Gaps = 4/439 (0%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D  +++D+M         ++  V++  L  + L +   K+ +     G V N   YNVLI
Sbjct: 242 DARKLYDEMLAEESGADDYSTCVMVRGLCLEGLVEKGLKLIEARWGAGCVPNAVFYNVLI 301

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
              C+  DV +   LL EME K +   + TY TL++   +KG   +  ++   M    + 
Sbjct: 302 DGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRLP 361

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
           P++  YNS+I   C+     +A  + + +   G  P+ +T++TLI G C+   ++EA RL
Sbjct: 362 PNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAERL 421

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
                   + P + +Y S++   C  G +  A+ LL EM E+   PD VT   LI+    
Sbjct: 422 LRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVV 481

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            G  + A+ V+ +M    L+ D   Y  LI G CK K +  A+ L+  ML+    P    
Sbjct: 482 AGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYV 541

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+ L+DG+    + +   K+ +    +G+  DV  Y A+I+ +C+   ++ A    + M+
Sbjct: 542 YTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMR 601

Query: 506 GNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAK--DNE 563
             G + D   YT+L   Y + G       +L DM +RR    +  Y S    Y K  D +
Sbjct: 602 KVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTD 661

Query: 564 ILDLFWSHVVDRGLMSKHI 582
             +  +  +  +GL    I
Sbjct: 662 AAECLFGSMESQGLFPNVI 680



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 121/451 (26%), Positives = 188/451 (41%), Gaps = 52/451 (11%)

Query: 144 KMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLY 203
           +     L V  QM      P     + L++ L ++       ++ ++  +  +  N+  Y
Sbjct: 378 RSASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSY 437

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER 263
             LIH  C   +V     LL EM  +    D+ T+  LI      G   EAL V+++M  
Sbjct: 438 TSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAA 497

Query: 264 EGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEE 321
             + PD   YN LI G C++  +  AR L  ++  +   P+   YTTLIDG+ R   L+E
Sbjct: 498 RQLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDE 557

Query: 322 ALRLREVMAAKGVYPGVVTYNSILRKLC-------------------------------- 349
           A ++ E M  KG++P VV YN++++  C                                
Sbjct: 558 ARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIG 617

Query: 350 ---KEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLML 406
              K+G I  A  LL +M +++  P+ V  ++LIN YCK+GDT +A  +   M   GL  
Sbjct: 618 GYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFP 677

Query: 407 DQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNK---------- 456
           +  TY  LI    K  ++  A      ML    SP+  +   LV G CN           
Sbjct: 678 NVITYTILIGSLFKKDKVVRAAMYFEYMLLNQCSPNDYTLHSLVTGLCNSMASIISSHCS 737

Query: 457 -----NNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILG 511
                + + ALL +    V+       S Y A+I   C    +  A  L N M   G   
Sbjct: 738 STVNLHGKGALLDIFRALVNDRCDPRNSAYNAIIFSLCIHNMLGEALDLKNKMANKGYKP 797

Query: 512 DSVIYTSLAYAYWRAGEPKACSDILDDMYRR 542
           DS  + SL Y +   G+ +    IL + ++R
Sbjct: 798 DSATFLSLLYGFCSVGKSREWRTILPNEFQR 828



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 67/323 (20%), Positives = 138/323 (42%), Gaps = 34/323 (10%)

Query: 84  MIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANL 143
           +I  L K K   +A+N++E++  ++             +H D     +V + L+  +   
Sbjct: 510 LISGLCKKKMLPAARNLIEEMLEQN-------------VHPD----KYVYTTLIDGFIRN 552

Query: 144 KMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLY 203
           +   +  ++F+ M    + P +     ++    +  + +   +    M ++G + +   Y
Sbjct: 553 ESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTY 612

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER 263
             LI    K  ++     LLC+M  +  + ++  Y++LI  YCK G    A  +   ME 
Sbjct: 613 TTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMES 672

Query: 264 EGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCR------ 315
           +G+ P+++TY  LI    ++ ++  A   F    +   +PN  T  +L+ G C       
Sbjct: 673 QGLFPNVITYTILIGSLFKKDKVVRAAMYFEYMLLNQCSPNDYTLHSLVTGLCNSMASII 732

Query: 316 ANDLEEALRLREVMAAKGVYPGVV---------TYNSILRKLCKEGRIRDANRLLNEMNE 366
           ++     + L    A   ++  +V          YN+I+  LC    + +A  L N+M  
Sbjct: 733 SSHCSSTVNLHGKGALLDIFRALVNDRCDPRNSAYNAIIFSLCIHNMLGEALDLKNKMAN 792

Query: 367 KKIAPDNVTCNTLINAYCKIGDT 389
           K   PD+ T  +L+  +C +G +
Sbjct: 793 KGYKPDSATFLSLLYGFCSVGKS 815


>gi|302761712|ref|XP_002964278.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
 gi|300168007|gb|EFJ34611.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
          Length = 331

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 102/308 (33%), Positives = 160/308 (51%), Gaps = 2/308 (0%)

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           D  TY  ++   CK     +ALA  + M   GI PD   YN ++ G C+E ++ EAR LF
Sbjct: 8   DALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLF 67

Query: 294 RDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
             +  +   PN VTY TLI+G C+A  +E A  L + MA KG  P  V+YN+++   CK+
Sbjct: 68  EKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKK 127

Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
             +  A  + ++M      P+ VT  TLI+   K G   +A +V + M++ G+  +  TY
Sbjct: 128 KDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATY 187

Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
             LI GFCK + +D A +LL  M+  G +P+  +Y+ L++  C  +  E   KL      
Sbjct: 188 SCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQ 247

Query: 472 RGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKA 531
           R     V  Y  L+R  C  +++D A RL+  M   G   D++ Y +LA+   RAG+   
Sbjct: 248 RRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHE 307

Query: 532 CSDILDDM 539
             ++++ M
Sbjct: 308 AQELMEKM 315



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 90/305 (29%), Positives = 161/305 (52%), Gaps = 2/305 (0%)

Query: 203 YNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRME 262
           Y  ++   CK+  +D     + EM  + ++ D F YN +++  C++    EA  + ++M 
Sbjct: 12  YGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMV 71

Query: 263 REGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLE 320
           ++ I+P++VTYN+LI+G C+  R+  A  LF+++  KG  P  V+Y TLIDG+C+  DL 
Sbjct: 72  KQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLV 131

Query: 321 EALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLI 380
            A  + + M      P VVTY +++  L K G+++ A  +L+ M +K + P+  T + LI
Sbjct: 132 AAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLI 191

Query: 381 NAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFS 440
           + +CK+     A K+  +M+  G+     TY  L++  C+A +++ A +L  GM      
Sbjct: 192 DGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCH 251

Query: 441 PSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRL 500
           P+  +Y+ L+   C+    +   +L  E +++G   D   Y  L     +  KV  AQ L
Sbjct: 252 PTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQEL 311

Query: 501 FNLMQ 505
              M+
Sbjct: 312 MEKMK 316



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 95/293 (32%), Positives = 151/293 (51%), Gaps = 2/293 (0%)

Query: 144 KMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLY 203
           K   D L   ++M    + P       +L+ L ++   +    +++KMV+  +  N+  Y
Sbjct: 23  KRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTY 82

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER 263
           N LI+  CK+  ++   +L  EM  K       +YNTLI  +CKK     A  V D+M R
Sbjct: 83  NTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVR 142

Query: 264 EGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEE 321
               P++VTY +LI G  + G+++ A  +   +  KG TPN  TY+ LIDG+C+   ++E
Sbjct: 143 SNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDE 202

Query: 322 ALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
           A +L E M  +G+ P VVTYN +L  LC+  ++ DA +L   M +++  P  VT NTL+ 
Sbjct: 203 AHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLR 262

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGM 434
           A C       A ++   M+  G   D  TY  L  G  +A ++  A+EL+  M
Sbjct: 263 ALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKM 315



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 80/256 (31%), Positives = 133/256 (51%)

Query: 299 ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDAN 358
           A P+ +TY  +++  C+   +++AL   E MA +G+ P    YN +L  LC+E ++ +A 
Sbjct: 5   APPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEAR 64

Query: 359 RLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGF 418
            L  +M +++I P+ VT NTLIN  CK     +A ++   M   G +  + +Y  LI GF
Sbjct: 65  LLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGF 124

Query: 419 CKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDV 478
           CK K++  AK++   M+ +   P+  +Y+ L+DG       +A  ++LD  V +G+  +V
Sbjct: 125 CKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNV 184

Query: 479 SVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDD 538
           + Y  LI  FCK  +VD A +L   M   GI    V Y  L  +  RA + +    +   
Sbjct: 185 ATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRG 244

Query: 539 MYRRRLMITLKIYRSF 554
           M +RR   T+  Y + 
Sbjct: 245 MAQRRCHPTVVTYNTL 260



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 86/284 (30%), Positives = 139/284 (48%), Gaps = 2/284 (0%)

Query: 171 LLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKD 230
           ++  L K +  D      ++M   G+  +  +YN ++   C+   V++   L  +M  + 
Sbjct: 15  IVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQR 74

Query: 231 VRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREAR 290
           +  ++ TYNTLI   CK      A  +   M  +G  P  V+YN+LI GFC++  +  A+
Sbjct: 75  INPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAK 134

Query: 291 RLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
            +F  +      PN VTYTTLIDG  ++  ++ A  + + M  KGV P V TY+ ++   
Sbjct: 135 DVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGF 194

Query: 349 CKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ 408
           CK  R+ +A++LL +M  + IAP  VT N L+N+ C+      A K+   M +       
Sbjct: 195 CKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTV 254

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
            TY  L+   C  K++D A  L   M+  G  P   +Y  L  G
Sbjct: 255 VTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWG 298



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 69/223 (30%), Positives = 112/223 (50%), Gaps = 2/223 (0%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           ++F +M     +P   +   L++   K +       V+ KMV+   V N+  Y  LI   
Sbjct: 100 ELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGL 159

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
            KS  V    ++L  M  K V  ++ TY+ LI  +CK     EA  + ++M  +GI+P +
Sbjct: 160 SKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTV 219

Query: 271 VTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
           VTYN L++  CR  ++ +A +LFR +  +   P  VTY TL+   C    L+ A RL   
Sbjct: 220 VTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAE 279

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAP 371
           M AKG  P  +TY+++   L + G++ +A  L+ +M   K  P
Sbjct: 280 MIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLTKRNP 322



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 118/252 (46%), Gaps = 19/252 (7%)

Query: 80  SHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIF 139
           ++ T+I+ L K    ++A  + +++A + ++ T    N L+      DG           
Sbjct: 81  TYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLI------DG----------- 123

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
           +   K       VFD+M   N +P++   T L++ L+K        +V   MV+ GV  N
Sbjct: 124 FCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPN 183

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
           +  Y+ LI   CK   VD+  KLL +M  + +   + TYN L+   C+     +A  +  
Sbjct: 184 VATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFR 243

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRAN 317
            M +    P +VTYN+L+   C   ++  A RL+ ++  KG  P+ +TY TL  G  RA 
Sbjct: 244 GMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAG 303

Query: 318 DLEEALRLREVM 329
            + EA  L E M
Sbjct: 304 KVHEAQELMEKM 315



 Score = 78.6 bits (192), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 66/272 (24%), Positives = 120/272 (44%), Gaps = 34/272 (12%)

Query: 30  LNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILT 89
           +NPN+ +       +  L+N    C    +  A+  + E A   Y  +  S+ T+I    
Sbjct: 75  INPNVVT-------YNTLIN--GLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFC 125

Query: 90  KNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDG 149
           K K   +A+++ +K+   + +  P+V+     I    DG S                Q  
Sbjct: 126 KKKDLVAAKDVFDKMVRSNCV--PNVVTYTTLI----DGLSKS-----------GKVQAA 168

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
            +V D M    + P++   + L++   K R  D   K+ ++MV  G+   +  YN+L+++
Sbjct: 169 AEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNS 228

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMERE----G 265
            C++  ++   KL   M  +     + TYNTL+   C    H++ L    R+  E    G
Sbjct: 229 LCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALC----HHKQLDGAHRLYAEMIAKG 284

Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRDIK 297
             PD +TY++L  G  R G++ EA+ L   +K
Sbjct: 285 CPPDAITYDTLAWGLTRAGKVHEAQELMEKMK 316


>gi|326525465|dbj|BAJ88779.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 680

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 105/387 (27%), Positives = 188/387 (48%), Gaps = 1/387 (0%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N      LV F+    M +  +QV  QM  H   P+   C +++N++ K    D  +   
Sbjct: 291 NEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFL 350

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
             M   G   +   Y  ++   C++   +  ++LL EM  K+   +  T+NT I + C+K
Sbjct: 351 NNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQK 410

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYTT 308
           G+  +A+ + + M   G S  IVTYN+L+HGFC +GR+  A  LF ++    PN +TYTT
Sbjct: 411 GLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLP-CEPNTITYTT 469

Query: 309 LIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKK 368
           L+ G C A  L+ A  L   M  K      VT+N ++   C++G + +A  L+N+M E  
Sbjct: 470 LLTGLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHG 529

Query: 369 IAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAK 428
             P+ +T NTL++   K  ++  A+++ + ++  G+ LD  TY +++    +    + A 
Sbjct: 530 CTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAI 589

Query: 429 ELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRF 488
           ++L  + D G  P    Y+ ++   C +   +  +      VS G   + S Y  LI   
Sbjct: 590 QMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGL 649

Query: 489 CKKEKVDYAQRLFNLMQGNGILGDSVI 515
             +  +  A+ + + +   G+L  S++
Sbjct: 650 AHEGLLKEARYVLSELYAKGVLSKSLL 676



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 107/366 (29%), Positives = 171/366 (46%), Gaps = 40/366 (10%)

Query: 191 MVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGM 250
           M+Q G   ++  Y VL+ A CKSS   +   +L EM  K    ++ TYN +I   C++G 
Sbjct: 178 MLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGR 237

Query: 251 HYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTT 308
             +A  + +R+   G  PDIV+Y +++ G C   R  + + LF ++  K   PN VT+  
Sbjct: 238 VDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDM 297

Query: 309 LIDGYCRANDLEEALRLREVMAAKGVYPG------------------------------- 337
           L+  +CR   +E A+++ + M+  G  P                                
Sbjct: 298 LVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYG 357

Query: 338 ----VVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAM 393
                ++Y ++LR LC+ GR   A  LL EM  K   P+ VT NT I   C+ G    A+
Sbjct: 358 CNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAI 417

Query: 394 KVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGY 453
           K+   M E G  +   TY AL+HGFC    +D A E LF  L     P+  +Y+ L+ G 
Sbjct: 418 KLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALE-LFNNLPC--EPNTITYTTLLTGL 474

Query: 454 CNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDS 513
           C+    +A  +LL E + +   ++   +  L+  FC+K  V+ A  L N M  +G   + 
Sbjct: 475 CHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNL 534

Query: 514 VIYTSL 519
           + + +L
Sbjct: 535 ITFNTL 540



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 117/485 (24%), Positives = 206/485 (42%), Gaps = 71/485 (14%)

Query: 132 VLSWLVIFYANLKMTQDG--LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYK 189
           V+++ V+  A  K +  G  + V D+MR     P++    V++N + ++   D   ++  
Sbjct: 187 VVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILN 246

Query: 190 KMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKG 249
           ++   G   +I  Y  ++   C +   D V+ L  EM  K    +  T++ L+  +C+ G
Sbjct: 247 RLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGG 306

Query: 250 MHYEALAVQDRMEREGISP-----------------------------------DIVTYN 274
           M   A+ V  +M + G +P                                   D ++Y 
Sbjct: 307 MVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYT 366

Query: 275 SLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAK 332
           +++ G CR GR   A+ L  ++  K   PN VT+ T I   C+   +E+A++L E+M   
Sbjct: 367 TVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEY 426

Query: 333 GVYPGVVTYN--------------------------------SILRKLCKEGRIRDANRL 360
           G   G+VTYN                                ++L  LC   R+  A  L
Sbjct: 427 GCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCEPNTITYTTLLTGLCHAERLDAAAEL 486

Query: 361 LNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCK 420
           L EM +K    + VT N L++ +C+ G    AM++ N+M+E G   +  T+  L+ G  K
Sbjct: 487 LAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITK 546

Query: 421 AKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSV 480
               + A ELL G++  G S    +YS +VD    ++  E  +++L      G+   V +
Sbjct: 547 DCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGM 606

Query: 481 YRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMY 540
           Y  ++   CK+ + D A   F  M  NG + +   Y  L       G  K    +L ++Y
Sbjct: 607 YNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARYVLSELY 666

Query: 541 RRRLM 545
            + ++
Sbjct: 667 AKGVL 671



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 94/347 (27%), Positives = 151/347 (43%), Gaps = 43/347 (12%)

Query: 261 MEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRAND 318
           M + G  P +VTY  L+   C+     EA  +  ++  KG TPN VTY  +I+G CR   
Sbjct: 178 MLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGR 237

Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVT--- 375
           +++A  +   +++ G  P +V+Y ++L+ LC   R  D   L  EM +KK  P+ VT   
Sbjct: 238 VDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDM 297

Query: 376 --------------------------------CNTLINAYCKIGDTASAMKVKNRMLEAG 403
                                           CN +INA CK G    A    N M   G
Sbjct: 298 LVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYG 357

Query: 404 LMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALL 463
              D  +Y  ++ G C+A   + AKELL  M+     P+  +++  +   C K   E  +
Sbjct: 358 CNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAI 417

Query: 464 KLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAY 523
           KL++     G  V +  Y AL+  FC + +VD A  LFN +       +++ YT+L    
Sbjct: 418 KLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCE---PNTITYTTLLTGL 474

Query: 524 WRAGEPKACSDILDDMYRRRL---MITLKIYRSFSASYAKDNEILDL 567
             A    A +++L +M ++      +T  +  SF        E ++L
Sbjct: 475 CHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMEL 521


>gi|115461911|ref|NP_001054555.1| Os05g0132000 [Oryza sativa Japonica Group]
 gi|52353663|gb|AAU44229.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113578106|dbj|BAF16469.1| Os05g0132000 [Oryza sativa Japonica Group]
 gi|125550727|gb|EAY96436.1| hypothetical protein OsI_18334 [Oryza sativa Indica Group]
          Length = 637

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 127/486 (26%), Positives = 218/486 (44%), Gaps = 27/486 (5%)

Query: 72  PNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSH 131
           P    S + H   +  L         Q  L+++ LR    T   L A +           
Sbjct: 45  PGSGDSARHHEATVRRLAAAGDVDGVQYALQEMRLRGVACTEDALVAAIGAFARAGSADR 104

Query: 132 VLSWLVIFY--ANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYK 189
            L     FY  ++L     G++V++                LL++L ++ +   V  VY 
Sbjct: 105 ALK---TFYRASDLGCRDPGVRVYNH---------------LLDALLRENMVGAVVPVYD 146

Query: 190 KMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKG 249
            M + GV  N++ YN+LI A C++  VD   K+L EM  K    D  ++ T+++  CK G
Sbjct: 147 NMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLG 206

Query: 250 MHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYT 307
              EA     R       P   +YN+++H  C E RM E   +  ++  +G  PN VTYT
Sbjct: 207 RVEEA-----RGFLAETVPVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYT 261

Query: 308 TLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEK 367
           T++D +C+A +L  A  +   M + G  P V+T+ ++++   ++G++ DA  + + M ++
Sbjct: 262 TIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDE 321

Query: 368 KIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIA 427
             AP  ++ N LI   C IGD   A+   N M    L+ +  TY  L+ GF  A ++D A
Sbjct: 322 GWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGA 381

Query: 428 KELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRR 487
             +   M  +G  P+   Y+ ++D  C K   +    L+D+ +      +   +  LI R
Sbjct: 382 MLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGR 441

Query: 488 FCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMIT 547
            C   +V  A  +F+ M+ NG   +   Y  L +  +R G  K    ++ +M      ++
Sbjct: 442 LCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELS 501

Query: 548 LKIYRS 553
           L  Y +
Sbjct: 502 LVTYNT 507



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 99/338 (29%), Positives = 163/338 (48%), Gaps = 2/338 (0%)

Query: 184 VWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIA 243
           V+ V  +MVQ G+  N+  Y  ++ A CK+ ++     +L  M       ++ T+  L+ 
Sbjct: 241 VFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVK 300

Query: 244 LYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATP 301
            + + G  ++AL++   M  EG +P  ++YN LI G C  G ++ A   F  +K     P
Sbjct: 301 GFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLP 360

Query: 302 NHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLL 361
           N  TY+TL+DG+  A DL+ A+ +   M + G  P VV Y +++  LCK+     A  L+
Sbjct: 361 NATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLI 420

Query: 362 NEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKA 421
           ++M      P+ VT NTLI   C  G    A+ V + M   G   +  TY  L+HG  + 
Sbjct: 421 DKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFRE 480

Query: 422 KEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVY 481
                A  ++  ML+ GF  S  +Y+ +++  C     +  + LL   + +G+  D   +
Sbjct: 481 GNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTF 540

Query: 482 RALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
            A+I  +CK+ KV  A  L   M       + V YT L
Sbjct: 541 NAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTIL 578



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 98/376 (26%), Positives = 169/376 (44%), Gaps = 6/376 (1%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           SV+N +V+    P  N    + +V  +   +  +    +  +M      P++   T L+ 
Sbjct: 243 SVVNEMVQRGLQP--NVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVK 300

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
              +D        ++  MV  G   +   YNVLI   C   D+         M+   +  
Sbjct: 301 GFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLP 360

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           +  TY+TL+  +   G    A+ + + M+  G  P++V Y ++I   C++    +A  L 
Sbjct: 361 NATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLI 420

Query: 294 RDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
             +      PN VT+ TLI   C    +  AL +   M   G +P   TYN +L  L +E
Sbjct: 421 DKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFRE 480

Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
           G  +DA  ++ EM         VT NT+IN  C++     AM +  RM+  G+  D FT+
Sbjct: 481 GNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTF 540

Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSP-SYCSYSWLVDGYCNKNNEEALLKLLDEFV 470
            A+IH +CK  ++ IA  LL G ++A   P +  +Y+ L+   CN+      +  L + +
Sbjct: 541 NAIIHAYCKEGKVSIAACLL-GQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKML 599

Query: 471 SRGLCVDVSVYRALIR 486
             G+C + + +  L+R
Sbjct: 600 YEGICPNEATWNVLVR 615



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 62/221 (28%), Positives = 97/221 (43%), Gaps = 9/221 (4%)

Query: 137 VIFYANL------KMTQDGLQ-VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYK 189
           V+ Y N+      KM  D  + + D+M + N  P+      L+  L           V+ 
Sbjct: 397 VVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFH 456

Query: 190 KMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKG 249
            M + G   N   YN L+H   +  +      ++ EM        L TYNT+I   C+  
Sbjct: 457 GMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMC 516

Query: 250 MHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGAT-P-NHVTYT 307
           M   A+ +  RM  +GI PD  T+N++IH +C+EG++  A  L   +     P N V YT
Sbjct: 517 MRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYT 576

Query: 308 TLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
            LI   C    L  A+     M  +G+ P   T+N ++R +
Sbjct: 577 ILISELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLVRAI 617


>gi|145360025|ref|NP_179305.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122223754|sp|Q0WPZ6.1|PP158_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g17140
 gi|110737729|dbj|BAF00803.1| hypothetical protein [Arabidopsis thaliana]
 gi|330251496|gb|AEC06590.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 874

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 137/606 (22%), Positives = 248/606 (40%), Gaps = 105/606 (17%)

Query: 32  PNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKN 91
           P IA  L    +H+ +  L+N     S+               K  L S  +++ I  K+
Sbjct: 43  PTIARILVRAKMHEEIQELHNLILSSSIQ--------------KTKLSSLLSVVSIFAKS 88

Query: 92  KHFKSAQNMLEKIALRDFLSTPSV------LNALVKIHDDPDGNSHVLSWLVIFYANLKM 145
            H   A    + +  R   + PSV      L + +K     +     +SWL         
Sbjct: 89  NHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIK-----ERRVEFVSWL--------- 134

Query: 146 TQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNV 205
                  +  M +  + P  +   +L+ +L      D   +++ +M + G   N   + +
Sbjct: 135 -------YKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGI 187

Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
           L+   CK+   DK  +LL  ME   V  +   YNT+++ +C++G + ++  + ++M  EG
Sbjct: 188 LVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEG 247

Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRDIK------GATPNHVTYTTLIDGYCRANDL 319
           + PDIVT+NS I   C+EG++ +A R+F D++         PN +TY  ++ G+C+   L
Sbjct: 248 LVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLL 307

Query: 320 EEALRLREV-----------------------------------MAAKGVYPGVVTYNSI 344
           E+A  L E                                    M  KG+ P + +YN +
Sbjct: 308 EDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNIL 367

Query: 345 LRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGL 404
           +  LCK G + DA  ++  M    + PD VT   L++ YC +G   +A  +   M+    
Sbjct: 368 MDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNC 427

Query: 405 MLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLK 464
           + + +T   L+H   K   +  A+ELL  M + G+     + + +VDG C     +  ++
Sbjct: 428 LPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIE 487

Query: 465 LL-----------------------DEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
           ++                       D  +      D+  Y  L+   CK  +   A+ LF
Sbjct: 488 IVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLF 547

Query: 502 NLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKD 561
             M G  +  DSV Y    + + + G+  +   +L DM ++    +L+ Y S        
Sbjct: 548 AEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIK 607

Query: 562 NEILDL 567
           N+I ++
Sbjct: 608 NQIFEI 613



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 122/479 (25%), Positives = 213/479 (44%), Gaps = 30/479 (6%)

Query: 126 PDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVW 185
           P  NS   + ++  +  + + +D   +F+ +R ++ +  L +  + L  L +        
Sbjct: 287 PRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAE 346

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
            V K+M   G+  +I+ YN+L+   CK   +   + ++  M+   V  D  TY  L+  Y
Sbjct: 347 TVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGY 406

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNH 303
           C  G    A ++   M R    P+  T N L+H   + GR+ EA  L R +  KG   + 
Sbjct: 407 CSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDT 466

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKG-----------------------VYPGVVT 340
           VT   ++DG C + +L++A+ + + M   G                         P ++T
Sbjct: 467 VTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLIT 526

Query: 341 YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML 400
           Y+++L  LCK GR  +A  L  EM  +K+ PD+V  N  I+ +CK G  +SA +V   M 
Sbjct: 527 YSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDME 586

Query: 401 EAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEE 460
           + G      TY +LI G     ++     L+  M + G SP+ C+Y+  +   C     E
Sbjct: 587 KKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVE 646

Query: 461 ALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGD-SVIYTSL 519
               LLDE + + +  +V  ++ LI  FCK    D AQ +F       I G    +Y+ +
Sbjct: 647 DATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFE--TAVSICGQKEGLYSLM 704

Query: 520 AYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDN--EILDLFWSHVVDRG 576
                 AG+    +++L+ +  R   +   +Y+    S  K +  E+       ++DRG
Sbjct: 705 FNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRG 763



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 109/384 (28%), Positives = 179/384 (46%), Gaps = 36/384 (9%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           +  +M  +N +P+ + C +LL+SL K        ++ +KM + G   +    N+++   C
Sbjct: 418 LLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLC 477

Query: 212 KSSDVDKVEKLLCEMEFKDVRA-----------------------DLFTYNTLIALYCKK 248
            S ++DK  +++  M      A                       DL TY+TL+   CK 
Sbjct: 478 GSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKA 537

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTY 306
           G   EA  +   M  E + PD V YN  IH FC++G++  A R+ +D+  KG   +  TY
Sbjct: 538 GRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETY 597

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
            +LI G    N + E   L + M  KG+ P + TYN+ ++ LC+  ++ DA  LL+EM +
Sbjct: 598 NSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQ 657

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLML---DQFTYKALIHGFCKAKE 423
           K IAP+  +   LI A+CK+ D   A +V     E  + +    +  Y  + +    A +
Sbjct: 658 KNIAPNVFSFKYLIEAFCKVPDFDMAQEV----FETAVSICGQKEGLYSLMFNELLAAGQ 713

Query: 424 MDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVD----VS 479
           +  A ELL  +LD GF      Y  LV+  C K+  E    +L + + RG   D    + 
Sbjct: 714 LLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMP 773

Query: 480 VYRALIRRFCKKEKVDYAQRLFNL 503
           V   L +   KKE   +A ++  +
Sbjct: 774 VIDGLGKMGNKKEANSFADKMMEM 797


>gi|145358679|ref|NP_198856.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171831|sp|Q9FND8.1|PP409_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g40400
 gi|10178151|dbj|BAB11596.1| salt-inducible protein-like [Arabidopsis thaliana]
 gi|110742507|dbj|BAE99171.1| hypothetical protein [Arabidopsis thaliana]
 gi|332007160|gb|AED94543.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 610

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 145/531 (27%), Positives = 243/531 (45%), Gaps = 16/531 (3%)

Query: 8   NSDTKFIKTISAIMLKGHWAKLLNPNIASSLTSTAIH-------KVLLNLYNCCHIPSLS 60
            + +K +  I + +    ++ LL PN+   + S   H       +VLL   +     S +
Sbjct: 41  QNPSKIVDVICSTLNHSDYSVLL-PNLRDEVKSLIPHLGYPEISRVLLRFQS---DASRA 96

Query: 61  CAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNML-EKIALRDFLSTPSVLNAL 119
             FFKW +  +   + ++ ++  ++HIL  +K F  A   L E I L        V   L
Sbjct: 97  ITFFKWVKFDL-GKRPNVGNYCLLLHILVSSKKFPLAMQFLCELIELTSKKEEVDVFRVL 155

Query: 120 VKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDR 179
           V   D+ + +  V   LV  Y  L + ++G +VF ++        +  C  LLN L K  
Sbjct: 156 VSATDECNWDPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLD 215

Query: 180 LTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYN 239
           L +  W+VY  M ++G+  N + +N+L +  C  S+  +V+  L +ME +    DL TYN
Sbjct: 216 LMEDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYN 275

Query: 240 TLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--K 297
           TL++ YC++G   EA  +   M R  + PD+VTY SLI G C++GR+REA + F  +  +
Sbjct: 276 TLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDR 335

Query: 298 GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDA 357
           G  P+ ++Y TLI  YC+   ++++ +L   M    V P   T   I+    +EGR+  A
Sbjct: 336 GIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSA 395

Query: 358 NRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML-EAGLMLDQFTYKALIH 416
              + E+   K+      C+ LI + C+ G   +A  + +R++ E G      TY  LI 
Sbjct: 396 VNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIE 455

Query: 417 GFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCV 476
              +   ++ A  L   + +        +Y  L+   C          L+ E     +  
Sbjct: 456 SLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKP 515

Query: 477 DVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
           D  +  AL+  +CK+   D A+RL +L      + D   Y SL  A    G
Sbjct: 516 DSFICGALVYGYCKELDFDKAERLLSLFAMEFRIFDPESYNSLVKAVCETG 566



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 70/294 (23%), Positives = 124/294 (42%), Gaps = 8/294 (2%)

Query: 287 REARRLFRDIKGATP----NHVTYTTLIDGYCRANDLEEALRL-REVMAAKGVYPGVVTY 341
           +E   +FR +  AT     + V +  L+ GY +   +EE  R+ REV+ + G    VVT 
Sbjct: 146 KEEVDVFRVLVSATDECNWDPVVFDMLVKGYLKLGLVEEGFRVFREVLDS-GFSVSVVTC 204

Query: 342 NSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLE 401
           N +L  L K   + D  ++ + M    I P+  T N L N +C   +         +M E
Sbjct: 205 NHLLNGLLKLDLMEDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEE 264

Query: 402 AGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEA 461
            G   D  TY  L+  +C+   +  A  L   M      P   +Y+ L+ G C       
Sbjct: 265 EGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVRE 324

Query: 462 LLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAY 521
             +     V RG+  D   Y  LI  +CK+  +  +++L + M GN ++ D      +  
Sbjct: 325 AHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVE 384

Query: 522 AYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDR 575
            + R G   +  + + ++ R ++ I  ++      S  ++ +       H++DR
Sbjct: 385 GFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGK--PFAAKHLLDR 436



 Score = 48.1 bits (113), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 30/76 (39%), Positives = 44/76 (57%), Gaps = 5/76 (6%)

Query: 206 LIHACCKSSDVDKVEKLLC--EMEFKDVRADLFTYNTLIALYCKKGMHYE-ALAVQDRME 262
           L++  CK  D DK E+LL    MEF+    D  +YN+L+   C+ G  Y+ AL +Q+RM+
Sbjct: 523 LVYGYCKELDFDKAERLLSLFAMEFRIF--DPESYNSLVKAVCETGCGYKKALELQERMQ 580

Query: 263 REGISPDIVTYNSLIH 278
           R G  P+ +T   LI 
Sbjct: 581 RLGFVPNRLTCKYLIQ 596


>gi|356497651|ref|XP_003517673.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Glycine max]
          Length = 827

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 106/368 (28%), Positives = 178/368 (48%), Gaps = 2/368 (0%)

Query: 199 NIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQ 258
           N H +N +I+  CK  +V +  ++L EM+   +  D+++Y+ LI  +C KG   + L + 
Sbjct: 390 NSHSFNDVIYGFCKRGEVFEALQVLEEMKSSGILPDVYSYSILINAFCGKGDVMKCLDLM 449

Query: 259 DRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGATPNH--VTYTTLIDGYCRA 316
           + ME   I P IV+Y SLIHG C++  ++ A  +F  I  ++  +    Y TLIDG+C  
Sbjct: 450 EEMEHSQIKPSIVSYTSLIHGLCKKNMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQ 509

Query: 317 NDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTC 376
            D++ A++L E M    + P   +  S++R   K G    A  + N M    I PD + C
Sbjct: 510 GDMDSAIKLLEEMICNELVPTAFSCRSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIAC 569

Query: 377 NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD 436
           N +++  C+ G    A+ +     E G  L+  +Y A+I+  CK    + A ELL  ML 
Sbjct: 570 NYILDGSCRAGYFKEALTLLEDFQEHGFNLNPHSYNAIIYKLCKEGYPERALELLPRMLK 629

Query: 437 AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDY 496
               PS  +YS L+ G+  ++N +  + L    V  G+  +++ Y  L+  F    K+  
Sbjct: 630 RNVLPSVVNYSTLISGFAKQSNFKRAVNLFTRMVKVGITFNIATYTILMSIFSHSHKMHE 689

Query: 497 AQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSA 556
           A  +F  M+  G+  D + YT+L   +    E K    + ++M R      +  Y     
Sbjct: 690 AYGIFKEMKERGLCLDQISYTTLIVGFCNNREMKKAWALFEEMSREGCSPNVITYTCIID 749

Query: 557 SYAKDNEI 564
            + K N I
Sbjct: 750 GFCKSNRI 757



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 128/543 (23%), Positives = 241/543 (44%), Gaps = 35/543 (6%)

Query: 63  FFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIAL-RDFLS--------TP 113
           F  W E     + HS+     ++H       F  A   LE  AL RD +         T 
Sbjct: 179 FGNWVECH--GFSHSISCFRIIVHA------FALAGMRLEVWALLRDIVGFCNEAKYDTF 230

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
            + +A +      + +  V   L+  +A+  M ++ L VF   +   L P +  C  LL 
Sbjct: 231 ELFSAFLDSPQHVERSGVVFDVLISVFASNSMLENALDVFSNAKHVGLEPDIRTCNFLLK 290

Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVD----KVEKLLCEMEFK 229
            L +    + V +V++++   G   NI+ Y ++++  C     D    +   +L ++   
Sbjct: 291 CLVEANRVEFVRRVFEELKDRGPSPNIYTYTIMMNFYCSDVGCDAGMRQAAVILGKIYRS 350

Query: 230 DVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA 289
             +  + TY+T I   CK G    AL +   +       +  ++N +I+GFC+ G + EA
Sbjct: 351 GEKPTVVTYSTYIHGLCKVGNVEAALMLIRNLHYTNQPLNSHSFNDVIYGFCKRGEVFEA 410

Query: 290 RRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRK 347
            ++  ++K  G  P+  +Y+ LI+ +C   D+ + L L E M    + P +V+Y S++  
Sbjct: 411 LQVLEEMKSSGILPDVYSYSILINAFCGKGDVMKCLDLMEEMEHSQIKPSIVSYTSLIHG 470

Query: 348 LCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLD 407
           LCK+  +++A  + + +       D+    TLI+ +C  GD  SA+K+   M+   L+  
Sbjct: 471 LCKKNMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQGDMDSAIKLLEEMICNELVPT 530

Query: 408 QFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLD 467
            F+ ++LI G+ K    D A E+   ML  G  P   + ++++DG C     +  L LL+
Sbjct: 531 AFSCRSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEALTLLE 590

Query: 468 EFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
           +F   G  ++   Y A+I + CK+   + A  L   M    +L   V Y++L   + +  
Sbjct: 591 DFQEHGFNLNPHSYNAIIYKLCKEGYPERALELLPRMLKRNVLPSVVNYSTLISGFAKQS 650

Query: 528 EPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKEMQ 587
             K   ++   M +  +   +  Y    + ++  +++ + +             IFKEM+
Sbjct: 651 NFKRAVNLFTRMVKVGITFNIATYTILMSIFSHSHKMHEAY------------GIFKEMK 698

Query: 588 LRN 590
            R 
Sbjct: 699 ERG 701



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 106/373 (28%), Positives = 171/373 (45%), Gaps = 2/373 (0%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           L + ++M    + P + + T L++ L K  +      ++  +       +  +Y  LI  
Sbjct: 446 LDLMEEMEHSQIKPSIVSYTSLIHGLCKKNMLQNAVDIFHSIGASSCKYDSTVYETLIDG 505

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
            C   D+D   KLL EM   ++    F+  +LI  Y K G+  +AL V + M R+GI PD
Sbjct: 506 FCMQGDMDSAIKLLEEMICNELVPTAFSCRSLIRGYYKLGLFDQALEVFNAMLRDGIWPD 565

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLRE 327
            +  N ++ G CR G  +EA  L  D +  G   N  +Y  +I   C+    E AL L  
Sbjct: 566 TIACNYILDGSCRAGYFKEALTLLEDFQEHGFNLNPHSYNAIIYKLCKEGYPERALELLP 625

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
            M  + V P VV Y++++    K+   + A  L   M +  I  +  T   L++ +    
Sbjct: 626 RMLKRNVLPSVVNYSTLISGFAKQSNFKRAVNLFTRMVKVGITFNIATYTILMSIFSHSH 685

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
               A  +   M E GL LDQ +Y  LI GFC  +EM  A  L   M   G SP+  +Y+
Sbjct: 686 KMHEAYGIFKEMKERGLCLDQISYTTLIVGFCNNREMKKAWALFEEMSREGCSPNVITYT 745

Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGN 507
            ++DG+C  N  +    + D+     +  DV  Y  LI  + K    D A +L+++M+  
Sbjct: 746 CIIDGFCKSNRIDLATWVFDKMNRDSVIPDVVTYTVLIDWYHKHGYFDQAHKLYDVMKDK 805

Query: 508 GILGDSVIYTSLA 520
           G+L D + +  L 
Sbjct: 806 GVLPDDITHNVLG 818



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 105/401 (26%), Positives = 185/401 (46%), Gaps = 2/401 (0%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           NSH  + ++  +       + LQV ++M+   ++P +++ ++L+N+            + 
Sbjct: 390 NSHSFNDVIYGFCKRGEVFEALQVLEEMKSSGILPDVYSYSILINAFCGKGDVMKCLDLM 449

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
           ++M    +  +I  Y  LIH  CK + +     +   +     + D   Y TLI  +C +
Sbjct: 450 EEMEHSQIKPSIVSYTSLIHGLCKKNMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQ 509

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTY 306
           G    A+ + + M    + P   +  SLI G+ + G   +A  +F  +   G  P+ +  
Sbjct: 510 GDMDSAIKLLEEMICNELVPTAFSCRSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIAC 569

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
             ++DG CRA   +EAL L E     G      +YN+I+ KLCKEG    A  LL  M +
Sbjct: 570 NYILDGSCRAGYFKEALTLLEDFQEHGFNLNPHSYNAIIYKLCKEGYPERALELLPRMLK 629

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
           + + P  V  +TLI+ + K  +   A+ +  RM++ G+  +  TY  L+  F  + +M  
Sbjct: 630 RNVLPSVVNYSTLISGFAKQSNFKRAVNLFTRMVKVGITFNIATYTILMSIFSHSHKMHE 689

Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
           A  +   M + G      SY+ L+ G+CN    +    L +E    G   +V  Y  +I 
Sbjct: 690 AYGIFKEMKERGLCLDQISYTTLIVGFCNNREMKKAWALFEEMSREGCSPNVITYTCIID 749

Query: 487 RFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
            FCK  ++D A  +F+ M  + ++ D V YT L   Y + G
Sbjct: 750 GFCKSNRIDLATWVFDKMNRDSVIPDVVTYTVLIDWYHKHG 790



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 62/266 (23%), Positives = 121/266 (45%), Gaps = 26/266 (9%)

Query: 53  CCHIPSLSC--AFFKWAESAVPNYKH-----SLQSHWTMIHILTKNKHFKSAQNMLEKIA 105
           C +I   SC   +FK A + + +++      +  S+  +I+ L K  + + A  +L ++ 
Sbjct: 569 CNYILDGSCRAGYFKEALTLLEDFQEHGFNLNPHSYNAIIYKLCKEGYPERALELLPRML 628

Query: 106 LRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHL 165
            R+ L  PSV+N                S L+  +A     +  + +F +M    +  ++
Sbjct: 629 KRNVL--PSVVN---------------YSTLISGFAKQSNFKRAVNLFTRMVKVGITFNI 671

Query: 166 HACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCE 225
              T+L++  +        + ++K+M + G+  +   Y  LI   C + ++ K   L  E
Sbjct: 672 ATYTILMSIFSHSHKMHEAYGIFKEMKERGLCLDQISYTTLIVGFCNNREMKKAWALFEE 731

Query: 226 MEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGR 285
           M  +    ++ TY  +I  +CK      A  V D+M R+ + PD+VTY  LI  + + G 
Sbjct: 732 MSREGCSPNVITYTCIIDGFCKSNRIDLATWVFDKMNRDSVIPDVVTYTVLIDWYHKHGY 791

Query: 286 MREARRLFRDI--KGATPNHVTYTTL 309
             +A +L+  +  KG  P+ +T+  L
Sbjct: 792 FDQAHKLYDVMKDKGVLPDDITHNVL 817


>gi|125535814|gb|EAY82302.1| hypothetical protein OsI_37513 [Oryza sativa Indica Group]
          Length = 578

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 111/383 (28%), Positives = 189/383 (49%), Gaps = 7/383 (1%)

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
           P   +   LL  L   +  D+  K ++  ++  V  +I+ +N +I   C+   + K   +
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 223 LCEMEFKDVRADLFTYNTLIALYCKKG----MHYEALAVQDRMEREGISPDIVTYNSLIH 278
             +++   +   + TYN+LI  YCKKG    M++  + +++ +E  GISP  VT+  LI+
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVE-AGISPTAVTFGVLIN 272

Query: 279 GFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYP 336
           G+C+      A R+F ++K  G   + VTY +LI G C    +EE ++L E M   G+ P
Sbjct: 273 GYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSP 332

Query: 337 GVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVK 396
             +T+  +L+  CK+G + DAN  ++ M E+ + PD V    LI+ Y ++G    AM VK
Sbjct: 333 NEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVK 392

Query: 397 NRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNK 456
             M + G+  +  TY  LI GF ++ +   A  LL  M + G      +Y+ L+   C K
Sbjct: 393 EAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCK 452

Query: 457 NNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIY 516
                 +KLLDE    GL  +   Y  +I+ FC K  +  A  +   M+      + V Y
Sbjct: 453 GEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTY 512

Query: 517 TSLAYAYWRAGEPKACSDILDDM 539
                 + + G+    +D+L++M
Sbjct: 513 NVFIKYFCQIGKMDEANDLLNEM 535



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 110/390 (28%), Positives = 197/390 (50%), Gaps = 9/390 (2%)

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER 263
           N L+     +  VD  EK       + V  D++T+NT+I+  C+ G   +A  V   ++ 
Sbjct: 160 NALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKA 219

Query: 264 EGISPDIVTYNSLIHGFCREG---RMREARRLFRDI--KGATPNHVTYTTLIDGYCRAND 318
            G++P + TYNSLI G+C++G    M     L +++   G +P  VT+  LI+GYC+ ++
Sbjct: 220 WGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSN 279

Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT 378
              A+R+ E M  +G+   VVTYNS++  LC EG++ +  +L+ EM +  ++P+ +T   
Sbjct: 280 TAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGC 339

Query: 379 LINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAG 438
           ++  +CK G  A A    + M E  +  D   Y  LI G+ +  +M+ A  +   M   G
Sbjct: 340 VLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKG 399

Query: 439 FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQ 498
            SP+  +Y+ L+ G+    +  +   LLDE   +G+  DV  Y  LI   C K +V  A 
Sbjct: 400 ISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAV 459

Query: 499 RLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDI---LDDMYRRRLMITLKIYRSFS 555
           +L + M   G+  + + Y ++   +   G  K+  +I   ++   +R  ++T  ++  + 
Sbjct: 460 KLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYF 519

Query: 556 ASYAKDNEILDLFWSHVVDRGLMSKHIFKE 585
               K +E  DL  + ++D+ L+   I  E
Sbjct: 520 CQIGKMDEANDLL-NEMLDKCLVPNGITYE 548



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 102/308 (33%), Positives = 162/308 (52%), Gaps = 2/308 (0%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           +  +M    + P      VL+N   K+  T    +V+++M Q G+ A++  YN LI   C
Sbjct: 251 LLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLC 310

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
               V++  KL+ EME   +  +  T+  ++  +CKKGM  +A    D M    + PD+V
Sbjct: 311 SEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVV 370

Query: 272 TYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
            Y  LI G+ R G+M +A  +   +  KG +PN  TY  LI G+ R+ D   A  L + M
Sbjct: 371 IYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEM 430

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
             KG+   VVTYN ++  LC +G +R A +LL+EM+E  + P+++T NT+I  +C  G+ 
Sbjct: 431 KEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNI 490

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
            SA +++ RM +     +  TY   I  FC+  +MD A +LL  MLD    P+  +Y  +
Sbjct: 491 KSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETI 550

Query: 450 VDGYCNKN 457
            +G   K 
Sbjct: 551 KEGMMEKG 558



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 96/298 (32%), Positives = 157/298 (52%), Gaps = 2/298 (0%)

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
           K+MV+ G+      + VLI+  CK+S+     ++  EM+ + + A + TYN+LI+  C +
Sbjct: 253 KEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSE 312

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTY 306
           G   E + + + ME  G+SP+ +T+  ++ GFC++G M +A      +  +   P+ V Y
Sbjct: 313 GKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIY 372

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
           T LIDGY R   +E+A+ ++E MA KG+ P V TYN ++    + G  R A+ LL+EM E
Sbjct: 373 TILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKE 432

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
           K I  D VT N LI A C  G+   A+K+ + M E GL  +  TY  +I GFC    +  
Sbjct: 433 KGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKS 492

Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRAL 484
           A E+   M       +  +Y+  +  +C     +    LL+E + + L  +   Y  +
Sbjct: 493 AYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETI 550



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 66/266 (24%), Positives = 123/266 (46%), Gaps = 3/266 (1%)

Query: 301 PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRL 360
           P+  +   L+ G   A  ++ A +       + V P + T+N+++  LC+ G++R A  +
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 361 LNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVK---NRMLEAGLMLDQFTYKALIHG 417
             ++    +AP   T N+LI+ YCK G   +   V      M+EAG+     T+  LI+G
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273

Query: 418 FCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVD 477
           +CK      A  +   M   G + S  +Y+ L+ G C++   E  +KL++E    GL  +
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPN 333

Query: 478 VSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILD 537
              +  +++ FCKK  +  A    + M    +  D VIYT L   Y R G+ +    + +
Sbjct: 334 EITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKE 393

Query: 538 DMYRRRLMITLKIYRSFSASYAKDNE 563
            M ++ +   +  Y      +++  +
Sbjct: 394 AMAKKGISPNVTTYNCLITGFSRSGD 419



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 83/335 (24%), Positives = 145/335 (43%), Gaps = 22/335 (6%)

Query: 25  HWAKLLNPNIASSLTSTAI-HKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWT 83
           H   LL   + + ++ TA+   VL+N Y  C   + + A   + E        S+ ++ +
Sbjct: 247 HVDMLLKEMVEAGISPTAVTFGVLINGY--CKNSNTAAAVRVFEEMKQQGIAASVVTYNS 304

Query: 84  MIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANL 143
           +I  L      +    ++E+  + D   +P               N      ++  +   
Sbjct: 305 LISGLCSEGKVEEGVKLMEE--MEDLGLSP---------------NEITFGCVLKGFCKK 347

Query: 144 KMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLY 203
            M  D     D M   N+ P +   T+L++   +    +    V + M + G+  N+  Y
Sbjct: 348 GMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTY 407

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER 263
           N LI    +S D      LL EM+ K + AD+ TYN LI   C KG   +A+ + D M  
Sbjct: 408 NCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSE 467

Query: 264 EGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGA--TPNHVTYTTLIDGYCRANDLEE 321
            G+ P+ +TYN++I GFC +G ++ A  +   ++      N VTY   I  +C+   ++E
Sbjct: 468 VGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDE 527

Query: 322 ALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRD 356
           A  L   M  K + P  +TY +I   + ++G   D
Sbjct: 528 ANDLLNEMLDKCLVPNGITYETIKEGMMEKGYTPD 562



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 62/234 (26%), Positives = 110/234 (47%), Gaps = 3/234 (1%)

Query: 336 PGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKV 395
           P   + N++L  L    R+  A +       ++++PD  T NT+I+  C+IG    A  V
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 396 KNRMLEAGLMLDQFTYKALIHGFCK---AKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
              +   GL     TY +LI G+CK   A  M     LL  M++AG SP+  ++  L++G
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273

Query: 453 YCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGD 512
           YC  +N  A +++ +E   +G+   V  Y +LI   C + KV+   +L   M+  G+  +
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPN 333

Query: 513 SVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
            + +  +   + + G     +D +D M  R +   + IY      Y +  ++ D
Sbjct: 334 EITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMED 387



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/139 (23%), Positives = 63/139 (45%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           + D+M+   +   +    VL+ +L          K+  +M ++G+  N   YN +I   C
Sbjct: 426 LLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFC 485

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
              ++    ++   ME    RA++ TYN  I  +C+ G   EA  + + M  + + P+ +
Sbjct: 486 DKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGI 545

Query: 272 TYNSLIHGFCREGRMREAR 290
           TY ++  G   +G   + R
Sbjct: 546 TYETIKEGMMEKGYTPDIR 564


>gi|297745184|emb|CBI39176.3| unnamed protein product [Vitis vinifera]
          Length = 996

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 112/373 (30%), Positives = 186/373 (49%), Gaps = 18/373 (4%)

Query: 185 WKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIAL 244
           + + ++M+  G + +   Y+ +I   C +S VD    L  EM+   V  D+FTY  LI  
Sbjct: 465 YSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDS 524

Query: 245 YCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPN 302
           +CK G+  +A    D M R+G +P++VTY +LIH + +  +M  A  LF  +  +G  PN
Sbjct: 525 FCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPN 584

Query: 303 HVTYTTLIDGYCRANDLEEALRLREVMAAKG------VY----------PGVVTYNSILR 346
            VTYT LIDG+C++  +E+A ++   M          +Y          P + TY +++ 
Sbjct: 585 VVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVD 644

Query: 347 KLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLML 406
            LCK  ++++A  LL+ M+ +   P+++  + LI+ +CK+G    A  V  +M E G   
Sbjct: 645 GLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGP 704

Query: 407 DQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLL 466
           + +TY +LI    K K +D+A ++L  ML+   +P+   Y+ ++DG C     +   +L+
Sbjct: 705 NVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLM 764

Query: 467 DEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRA 526
                +G   +V  Y A+I  F K  KVD    L   M   G   + V Y  L      A
Sbjct: 765 SMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAA 824

Query: 527 GEPKACSDILDDM 539
           G       +LD+M
Sbjct: 825 GLLDDAHQLLDEM 837



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 122/451 (27%), Positives = 209/451 (46%), Gaps = 28/451 (6%)

Query: 123 HDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTD 182
           H  PD  ++ +  L+  +  + + Q   + FD+M      P++   T L+++  K R   
Sbjct: 510 HVVPDVFTYTI--LIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMS 567

Query: 183 MVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEM----EFKDVR------ 232
              ++++ M+  G + N+  Y  LI   CKS  ++K  ++   M    +  DV       
Sbjct: 568 SANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKID 627

Query: 233 ------ADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRM 286
                  ++FTY  L+   CK     EA  + D M  EG  P+ + Y++LI GFC+ G++
Sbjct: 628 DGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKL 687

Query: 287 REARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSI 344
            EA+ +F  +  +G  PN  TY++LID   +   L+ AL++   M      P V+ Y  +
Sbjct: 688 DEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEM 747

Query: 345 LRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGL 404
           +  LCK G+  +A RL++ M EK   P+ VT   +I+ + K G     +++  +M   G 
Sbjct: 748 IDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGC 807

Query: 405 MLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEAL-- 462
             +  TY+ LI+  C A  +D A +LL  M    +      Y  +++G+    N E +  
Sbjct: 808 APNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGF----NREFIIS 863

Query: 463 LKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQG--NGILGDSVIYTSLA 520
           L LLDE         +  YR LI  FCK  +++ A  L   M    +    D  +Y+SL 
Sbjct: 864 LGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLI 923

Query: 521 YAYWRAGEPKACSDILDDMYRRRLMITLKIY 551
            +   A +     ++  DM +R  +  L I+
Sbjct: 924 ESLSLASKVDKAFELYADMIKRGGIPELSIF 954



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 108/372 (29%), Positives = 172/372 (46%), Gaps = 32/372 (8%)

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
           ++  K Y +M+   VV N    + L    C +   +K   ++ EM  K    D  TY+ +
Sbjct: 427 ELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKV 486

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGA 299
           I L C       A  + + M+   + PD+ TY  LI  FC+ G +++AR+ F ++   G 
Sbjct: 487 IGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGC 546

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
            PN VTYT LI  Y +A  +  A  L E+M ++G  P VVTY +++   CK G+I  A +
Sbjct: 547 APNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQ 606

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ--FTYKALIHG 417
           +   M      PD       ++ Y KI D              G + D   FTY AL+ G
Sbjct: 607 IYARMRGNADIPD-------VDMYFKIDD--------------GNIRDPNIFTYGALVDG 645

Query: 418 FCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVD 477
            CKA ++  A++LL  M   G  P++  Y  L+DG+C     +    +  +   RG   +
Sbjct: 646 LCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPN 705

Query: 478 VSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILD 537
           V  Y +LI R  K +++D A ++ + M  N    + +IYT +     + G+        D
Sbjct: 706 VYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKT-------D 758

Query: 538 DMYRRRLMITLK 549
           + YR   M+  K
Sbjct: 759 EAYRLMSMMEEK 770



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 107/423 (25%), Positives = 178/423 (42%), Gaps = 25/423 (5%)

Query: 169 TVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEF 228
           T +++ L +  L +       +M     + N+  Y +L+  C +   + + +++L  M  
Sbjct: 303 TQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMIT 362

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
           +        +N+LI  YC+ G +  A  +  +M   G  P  V YN LI G C   ++  
Sbjct: 363 EGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPS 422

Query: 289 ------ARRLFRDIKGA--TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVT 340
                 A + + ++  A    N V  + L    C A   E+A  +   M +KG  P   T
Sbjct: 423 LDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTST 482

Query: 341 YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML 400
           Y+ ++  LC   ++ +A  L  EM    + PD  T   LI+++CK+G    A K  + M+
Sbjct: 483 YSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMV 542

Query: 401 EAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEE 460
             G   +  TY ALIH + KA++M  A EL   ML  G  P+  +Y+ L+DG+C     E
Sbjct: 543 RDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIE 602

Query: 461 ALLKLLDEFVSRGLCVDVSV----------------YRALIRRFCKKEKVDYAQRLFNLM 504
              ++           DV +                Y AL+   CK  KV  A+ L ++M
Sbjct: 603 KACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVM 662

Query: 505 QGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
              G   + ++Y +L   + + G+      +   M  R     +  Y S      KD   
Sbjct: 663 SVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKR- 721

Query: 565 LDL 567
           LDL
Sbjct: 722 LDL 724



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 107/406 (26%), Positives = 176/406 (43%), Gaps = 15/406 (3%)

Query: 171 LLNSLAKDRLTDMVWKV----YKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEM 226
           LLN L +    + +W V      ++  LG   +   YN L+    ++  +D    +  EM
Sbjct: 199 LLNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREM 258

Query: 227 EFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRM 286
                  D +T    + L CK G   EALA+   +E+E    D V Y  +I G C     
Sbjct: 259 SDSGFNMDGYTLGCFVHLLCKAGRWREALAL---IEKEEFKLDTVIYTQMISGLCEASLF 315

Query: 287 REARRLFRDIKGAT--PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSI 344
            EA      ++ ++  PN VTY  L+ G  R   L    R+  +M  +G YP    +NS+
Sbjct: 316 EEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSL 375

Query: 345 LRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTAS------AMKVKNR 398
           +   C+ G    A +LL +M +    P  V  N LI   C      S      A K    
Sbjct: 376 IHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGE 435

Query: 399 MLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNN 458
           ML+A ++L++     L    C A + + A  ++  M+  GF P   +YS ++   CN + 
Sbjct: 436 MLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASK 495

Query: 459 EEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTS 518
            +    L +E  S  +  DV  Y  LI  FCK   +  A++ F+ M  +G   + V YT+
Sbjct: 496 VDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTA 555

Query: 519 LAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
           L +AY +A +  + +++ + M     +  +  Y +    + K  +I
Sbjct: 556 LIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQI 601



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 111/423 (26%), Positives = 180/423 (42%), Gaps = 20/423 (4%)

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQ--LGVVANIHLYNVLIHACCKSSDVDKVE 220
           P  HA   +L     DR+ +   +  +   +  LG      L NVLI  CC++   +   
Sbjct: 163 PVYHALLEVLGCGGNDRVPEQFLREIRDEDKEILG-----KLLNVLIRKCCRNGLWNVAL 217

Query: 221 KLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGF 280
           + L  ++    +    TYN L+ ++ +      A  V   M   G + D  T    +H  
Sbjct: 218 EELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLL 277

Query: 281 CREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVT 340
           C+ GR REA  L    +    + V YT +I G C A+  EEA+     M +    P VVT
Sbjct: 278 CKAGRWREALALIEK-EEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVT 336

Query: 341 YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML 400
           Y  +L    ++ ++    R+L+ M  +   P     N+LI+AYC+ GD + A K+  +M 
Sbjct: 337 YRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMG 396

Query: 401 EAGLMLDQFTYKALIHGFCKAKE------MDIAKELLFGMLDAGFSPSYCSYSWLVDGYC 454
           + G       Y  LI G C  ++      +++A++    MLDA    +  + S L    C
Sbjct: 397 DCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLC 456

Query: 455 NKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSV 514
                E    ++ E +S+G   D S Y  +I   C   KVD A  LF  M+ N ++ D  
Sbjct: 457 GAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVF 516

Query: 515 IYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAK------DNEILDLF 568
            YT L  ++ + G  +      D+M R      +  Y +   +Y K       NE+ ++ 
Sbjct: 517 TYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMM 576

Query: 569 WSH 571
            S 
Sbjct: 577 LSE 579


>gi|147833287|emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
          Length = 1010

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 112/373 (30%), Positives = 186/373 (49%), Gaps = 18/373 (4%)

Query: 185 WKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIAL 244
           + + ++M+  G + +   Y+ +I   C +S VD    L  EM+   V  D+FTY  LI  
Sbjct: 465 YSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDS 524

Query: 245 YCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPN 302
           +CK G+  +A    D M R+G +P++VTY +LIH + +  +M  A  LF  +  +G  PN
Sbjct: 525 FCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPN 584

Query: 303 HVTYTTLIDGYCRANDLEEALRLREVMAAKG------VY----------PGVVTYNSILR 346
            VTYT LIDG+C++  +E+A ++   M          +Y          P + TY +++ 
Sbjct: 585 VVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVD 644

Query: 347 KLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLML 406
            LCK  ++++A  LL+ M+ +   P+++  + LI+ +CK+G    A  V  +M E G   
Sbjct: 645 GLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGP 704

Query: 407 DQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLL 466
           + +TY +LI    K K +D+A ++L  ML+   +P+   Y+ ++DG C     +   +L+
Sbjct: 705 NVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLM 764

Query: 467 DEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRA 526
                +G   +V  Y A+I  F K  KVD    L   M   G   + V Y  L      A
Sbjct: 765 SMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAA 824

Query: 527 GEPKACSDILDDM 539
           G       +LD+M
Sbjct: 825 GLLDDAHQLLDEM 837



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 122/451 (27%), Positives = 209/451 (46%), Gaps = 28/451 (6%)

Query: 123 HDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTD 182
           H  PD  ++ +  L+  +  + + Q   + FD+M      P++   T L+++  K R   
Sbjct: 510 HVVPDVFTYTI--LIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMS 567

Query: 183 MVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEM----EFKDVR------ 232
              ++++ M+  G + N+  Y  LI   CKS  ++K  ++   M    +  DV       
Sbjct: 568 SANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKID 627

Query: 233 ------ADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRM 286
                  ++FTY  L+   CK     EA  + D M  EG  P+ + Y++LI GFC+ G++
Sbjct: 628 DGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKL 687

Query: 287 REARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSI 344
            EA+ +F  +  +G  PN  TY++LID   +   L+ AL++   M      P V+ Y  +
Sbjct: 688 DEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEM 747

Query: 345 LRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGL 404
           +  LCK G+  +A RL++ M EK   P+ VT   +I+ + K G     +++  +M   G 
Sbjct: 748 IDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGC 807

Query: 405 MLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEAL-- 462
             +  TY+ LI+  C A  +D A +LL  M    +      Y  +++G+    N E +  
Sbjct: 808 APNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGF----NREFIIS 863

Query: 463 LKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQG--NGILGDSVIYTSLA 520
           L LLDE         +  YR LI  FCK  +++ A  L   M    +    D  +Y+SL 
Sbjct: 864 LGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKXMSSCTSYSAADKDLYSSLI 923

Query: 521 YAYWRAGEPKACSDILDDMYRRRLMITLKIY 551
            +   A +     ++  DM +R  +  L I+
Sbjct: 924 ESLSLASKVDKAFELYADMIKRGGIPELSIF 954



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 106/387 (27%), Positives = 176/387 (45%), Gaps = 25/387 (6%)

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
           ++  K Y +M+   VV N    + L    C +   +K   ++ EM  K    D  TY+ +
Sbjct: 427 ELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKV 486

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGA 299
           I L C       A  + + M+   + PD+ TY  LI  FC+ G +++AR+ F ++   G 
Sbjct: 487 IGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGC 546

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
            PN VTYT LI  Y +A  +  A  L E+M ++G  P VVTY +++   CK G+I  A +
Sbjct: 547 APNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQ 606

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ--FTYKALIHG 417
           +   M      PD       ++ Y KI D              G + D   FTY AL+ G
Sbjct: 607 IYARMRGNADIPD-------VDMYFKIDD--------------GNIRDPNIFTYGALVDG 645

Query: 418 FCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVD 477
            CKA ++  A++LL  M   G  P++  Y  L+DG+C     +    +  +   RG   +
Sbjct: 646 LCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPN 705

Query: 478 VSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILD 537
           V  Y +LI R  K +++D A ++ + M  N    + +IYT +     + G+      ++ 
Sbjct: 706 VYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMS 765

Query: 538 DMYRRRLMITLKIYRSFSASYAKDNEI 564
            M  +     +  Y +    + K  ++
Sbjct: 766 MMEEKGCHPNVVTYTAMIDGFGKAGKV 792



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 107/423 (25%), Positives = 178/423 (42%), Gaps = 25/423 (5%)

Query: 169 TVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEF 228
           T +++ L +  L +       +M     + N+  Y +L+  C +   + + +++L  M  
Sbjct: 303 TQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMIT 362

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
           +        +N+LI  YC+ G +  A  +  +M   G  P  V YN LI G C   ++  
Sbjct: 363 EGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPS 422

Query: 289 ------ARRLFRDIKGA--TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVT 340
                 A + + ++  A    N V  + L    C A   E+A  +   M +KG  P   T
Sbjct: 423 LDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTST 482

Query: 341 YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML 400
           Y+ ++  LC   ++ +A  L  EM    + PD  T   LI+++CK+G    A K  + M+
Sbjct: 483 YSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMV 542

Query: 401 EAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEE 460
             G   +  TY ALIH + KA++M  A EL   ML  G  P+  +Y+ L+DG+C     E
Sbjct: 543 RDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIE 602

Query: 461 ALLKLLDEFVSRGLCVDVSV----------------YRALIRRFCKKEKVDYAQRLFNLM 504
              ++           DV +                Y AL+   CK  KV  A+ L ++M
Sbjct: 603 KACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVM 662

Query: 505 QGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
              G   + ++Y +L   + + G+      +   M  R     +  Y S      KD   
Sbjct: 663 SVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKR- 721

Query: 565 LDL 567
           LDL
Sbjct: 722 LDL 724



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 107/406 (26%), Positives = 176/406 (43%), Gaps = 15/406 (3%)

Query: 171 LLNSLAKDRLTDMVWKV----YKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEM 226
           LLN L +    + +W V      ++  LG   +   YN L+    ++  +D    +  EM
Sbjct: 199 LLNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREM 258

Query: 227 EFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRM 286
                  D +T    + L CK G   EALA+   +E+E    D V Y  +I G C     
Sbjct: 259 SDSGFNMDGYTLGCFVHLLCKAGRWREALAL---IEKEEFKLDTVIYTQMISGLCEASLF 315

Query: 287 REARRLFRDIKGAT--PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSI 344
            EA      ++ ++  PN VTY  L+ G  R   L    R+  +M  +G YP    +NS+
Sbjct: 316 EEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSL 375

Query: 345 LRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTAS------AMKVKNR 398
           +   C+ G    A +LL +M +    P  V  N LI   C      S      A K    
Sbjct: 376 IHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGE 435

Query: 399 MLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNN 458
           ML+A ++L++     L    C A + + A  ++  M+  GF P   +YS ++   CN + 
Sbjct: 436 MLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASK 495

Query: 459 EEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTS 518
            +    L +E  S  +  DV  Y  LI  FCK   +  A++ F+ M  +G   + V YT+
Sbjct: 496 VDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTA 555

Query: 519 LAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
           L +AY +A +  + +++ + M     +  +  Y +    + K  +I
Sbjct: 556 LIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQI 601



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 111/423 (26%), Positives = 180/423 (42%), Gaps = 20/423 (4%)

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQ--LGVVANIHLYNVLIHACCKSSDVDKVE 220
           P  HA   +L     DR+ +   +  +   +  LG      L NVLI  CC++   +   
Sbjct: 163 PVYHALLEVLGCGGNDRVPEQFLREIRDEDKEILG-----KLLNVLIRKCCRNGLWNVAL 217

Query: 221 KLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGF 280
           + L  ++    +    TYN L+ ++ +      A  V   M   G + D  T    +H  
Sbjct: 218 EELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLL 277

Query: 281 CREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVT 340
           C+ GR REA  L    +    + V YT +I G C A+  EEA+     M +    P VVT
Sbjct: 278 CKAGRWREALALIEK-EEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVT 336

Query: 341 YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML 400
           Y  +L    ++ ++    R+L+ M  +   P     N+LI+AYC+ GD + A K+  +M 
Sbjct: 337 YRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMG 396

Query: 401 EAGLMLDQFTYKALIHGFCKAKE------MDIAKELLFGMLDAGFSPSYCSYSWLVDGYC 454
           + G       Y  LI G C  ++      +++A++    MLDA    +  + S L    C
Sbjct: 397 DCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLC 456

Query: 455 NKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSV 514
                E    ++ E +S+G   D S Y  +I   C   KVD A  LF  M+ N ++ D  
Sbjct: 457 GAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVF 516

Query: 515 IYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAK------DNEILDLF 568
            YT L  ++ + G  +      D+M R      +  Y +   +Y K       NE+ ++ 
Sbjct: 517 TYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMM 576

Query: 569 WSH 571
            S 
Sbjct: 577 LSE 579


>gi|413924821|gb|AFW64753.1| hypothetical protein ZEAMMB73_344298 [Zea mays]
          Length = 698

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 115/379 (30%), Positives = 185/379 (48%), Gaps = 3/379 (0%)

Query: 149 GLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIH 208
           GL +  +M    ++P +     +++ L +      V  +  +M   G+  N+ +YN +I+
Sbjct: 135 GLLLLGEMETKGIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRARGLSPNVQIYNTVIN 194

Query: 209 ACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISP 268
           A CK     +   +L +M       D+ T+NT+IA +C++G   EAL +     R G+ P
Sbjct: 195 ALCKCRSASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALKLLREAIRRGLEP 254

Query: 269 DIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLR 326
           + ++Y  LIHGFC  G    A  L  ++  +G TP+ +T   LI G   +  + +AL +R
Sbjct: 255 NQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLVVSGQVNDALIVR 314

Query: 327 EVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKI 386
           E MA + V P    YN ++  LCK+  +  A  LL EM E+K+ PD     TLI+ + + 
Sbjct: 315 EKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRS 374

Query: 387 GDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSY 446
              + A K+   M E     D   Y  +I G+CK   M  A   +  M  AG  P   +Y
Sbjct: 375 DKLSDARKIFEFMEEKACP-DIVAYNVMIKGYCKFGMMKEAVTCMSSMRKAGCIPDEFTY 433

Query: 447 SWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQG 506
           + LVDGY  K +  A L+LL + + R    ++  Y +LI  +C       A+ LF  MQ 
Sbjct: 434 TTLVDGYAKKGDISASLRLLCDMMKRRCKPNIFTYASLICGYCNIGDTYSAEDLFAKMQS 493

Query: 507 NGILGDSVIYTSLAYAYWR 525
            G+  + V YT L  + ++
Sbjct: 494 EGLFPNVVHYTVLIGSLFK 512



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 108/366 (29%), Positives = 172/366 (46%), Gaps = 3/366 (0%)

Query: 195 GVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEA 254
           G V     YNVLI   C+  D+ +   LL EME K +   + TY  +I    +KG   + 
Sbjct: 111 GCVPGAVFYNVLIDGYCRRGDIGRGLLLLGEMETKGIIPTVVTYGAIIHWLGRKGDLTKV 170

Query: 255 LAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGA--TPNHVTYTTLIDG 312
            ++   M   G+SP++  YN++I+  C+     +A  +   +  +   P+ VT+ T+I G
Sbjct: 171 ESLLGEMRARGLSPNVQIYNTVINALCKCRSASQASDMLNQMVKSRFNPDVVTFNTMIAG 230

Query: 313 YCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPD 372
           +CR  D+ EAL+L      +G+ P  ++Y  ++   C  G    A+ LL EM  +   PD
Sbjct: 231 FCREGDVREALKLLREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPD 290

Query: 373 NVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLF 432
            +T   LI+     G    A+ V+ +M E  +M D   Y  LI G CK + +  AK LL 
Sbjct: 291 MITLGALIHGLVVSGQVNDALIVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLE 350

Query: 433 GMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKE 492
            ML+    P    Y+ L+DG+   +      K+  EF+    C D+  Y  +I+ +CK  
Sbjct: 351 EMLEQKVQPDKFIYTTLIDGFVRSDKLSDARKIF-EFMEEKACPDIVAYNVMIKGYCKFG 409

Query: 493 KVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYR 552
            +  A    + M+  G + D   YT+L   Y + G+  A   +L DM +RR    +  Y 
Sbjct: 410 MMKEAVTCMSSMRKAGCIPDEFTYTTLVDGYAKKGDISASLRLLCDMMKRRCKPNIFTYA 469

Query: 553 SFSASY 558
           S    Y
Sbjct: 470 SLICGY 475



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 101/334 (30%), Positives = 155/334 (46%), Gaps = 14/334 (4%)

Query: 217 DKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSL 276
           ++   L  EM  ++  AD ++   ++   C +G   E   + +    EG  P  V YN L
Sbjct: 63  ERARGLYGEMLVREGGADDYSTCVMVRGLCLEGRVEEGRGLIEARWGEGCVPGAVFYNVL 122

Query: 277 IHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGV 334
           I G+CR G +     L  ++  KG  P  VTY  +I    R  DL +   L   M A+G+
Sbjct: 123 IDGYCRRGDIGRGLLLLGEMETKGIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRARGL 182

Query: 335 YPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMK 394
            P V  YN+++  LCK      A+ +LN+M + +  PD VT NT+I  +C+ GD   A+K
Sbjct: 183 SPNVQIYNTVINALCKCRSASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALK 242

Query: 395 VKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYC 454
           +    +  GL  +Q +Y  LIHGFC   E  +A +LL  M+  G +P   +   L+ G  
Sbjct: 243 LLREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLV 302

Query: 455 NKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSV 514
                   L + ++   R +  D ++Y  LI   CKK  +  A+ L   M    +  D  
Sbjct: 303 VSGQVNDALIVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKF 362

Query: 515 IYTSLAYAYWRAG------------EPKACSDIL 536
           IYT+L   + R+             E KAC DI+
Sbjct: 363 IYTTLIDGFVRSDKLSDARKIFEFMEEKACPDIV 396



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 126/477 (26%), Positives = 209/477 (43%), Gaps = 51/477 (10%)

Query: 77  SLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWL 136
           ++Q + T+I+ L K +    A +ML               N +VK   +PD      + +
Sbjct: 185 NVQIYNTVINALCKCRSASQASDML---------------NQMVKSRFNPD--VVTFNTM 227

Query: 137 VIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNS--------LAKDRLTDMVWKVY 188
           +  +      ++ L++  +     L P+  + T L++         +A D L +M+ + +
Sbjct: 228 IAGFCREGDVREALKLLREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGH 287

Query: 189 KK-MVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCK 247
              M+ LG          LIH    S  V+    +  +M  + V  D   YN LI+  CK
Sbjct: 288 TPDMITLGA---------LIHGLVVSGQVNDALIVREKMAERQVMPDANIYNVLISGLCK 338

Query: 248 KGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK-GATPNHVTY 306
           K M   A  + + M  + + PD   Y +LI GF R  ++ +AR++F  ++  A P+ V Y
Sbjct: 339 KRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSDKLSDARKIFEFMEEKACPDIVAY 398

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
             +I GYC+   ++EA+     M   G  P   TY +++    K+G I  + RLL +M +
Sbjct: 399 NVMIKGYCKFGMMKEAVTCMSSMRKAGCIPDEFTYTTLVDGYAKKGDISASLRLLCDMMK 458

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
           ++  P+  T  +LI  YC IGDT SA  +  +M   GL  +   Y  LI    K  ++  
Sbjct: 459 RRCKPNIFTYASLICGYCNIGDTYSAEDLFAKMQSEGLFPNVVHYTVLIGSLFKKDKVIQ 518

Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCN---------------KNNEEALLKLLDEFVS 471
           A      ML     P+  +  +LV+G  N                + + ALL +    +S
Sbjct: 519 AAAYFEHMLLNHCPPNDATVHYLVNGLVNCRHGMVNSNRSDTKQAHEKSALLDVFRGLIS 578

Query: 472 RGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
            GL   +S Y A+I   C+   +  A  L + M   G L D + + SL Y +  AGE
Sbjct: 579 DGLDPRISAYNAIIFSLCRHNMLGKAMDLKDKMSNKGCLPDPITFLSLLYGFSSAGE 635



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 73/343 (21%), Positives = 140/343 (40%), Gaps = 36/343 (10%)

Query: 83  TMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVK------------------IHD 124
            +IH L  +     A  + EK+A R  +   ++ N L+                   +  
Sbjct: 296 ALIHGLVVSGQVNDALIVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQ 355

Query: 125 DPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMV 184
               +  + + L+  +       D  ++F+ M      P + A  V++    K  +    
Sbjct: 356 KVQPDKFIYTTLIDGFVRSDKLSDARKIFEFME-EKACPDIVAYNVMIKGYCKFGMMKEA 414

Query: 185 WKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIAL 244
                 M + G + +   Y  L+    K  D+    +LLC+M  +  + ++FTY +LI  
Sbjct: 415 VTCMSSMRKAGCIPDEFTYTTLVDGYAKKGDISASLRLLCDMMKRRCKPNIFTYASLICG 474

Query: 245 YCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPN 302
           YC  G  Y A  +  +M+ EG+ P++V Y  LI    ++ ++ +A   F    +    PN
Sbjct: 475 YCNIGDTYSAEDLFAKMQSEGLFPNVVHYTVLIGSLFKKDKVIQAAAYFEHMLLNHCPPN 534

Query: 303 HVTYTTLIDGY--CR-------------ANDLEEALRLREVMAAKGVYPGVVTYNSILRK 347
             T   L++G   CR             A++    L +   + + G+ P +  YN+I+  
Sbjct: 535 DATVHYLVNGLVNCRHGMVNSNRSDTKQAHEKSALLDVFRGLISDGLDPRISAYNAIIFS 594

Query: 348 LCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTA 390
           LC+   +  A  L ++M+ K   PD +T  +L+  +   G++ 
Sbjct: 595 LCRHNMLGKAMDLKDKMSNKGCLPDPITFLSLLYGFSSAGESG 637


>gi|225433790|ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Vitis vinifera]
          Length = 1045

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 112/373 (30%), Positives = 186/373 (49%), Gaps = 18/373 (4%)

Query: 185 WKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIAL 244
           + + ++M+  G + +   Y+ +I   C +S VD    L  EM+   V  D+FTY  LI  
Sbjct: 465 YSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDS 524

Query: 245 YCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPN 302
           +CK G+  +A    D M R+G +P++VTY +LIH + +  +M  A  LF  +  +G  PN
Sbjct: 525 FCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPN 584

Query: 303 HVTYTTLIDGYCRANDLEEALRLREVMAAKG------VY----------PGVVTYNSILR 346
            VTYT LIDG+C++  +E+A ++   M          +Y          P + TY +++ 
Sbjct: 585 VVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVD 644

Query: 347 KLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLML 406
            LCK  ++++A  LL+ M+ +   P+++  + LI+ +CK+G    A  V  +M E G   
Sbjct: 645 GLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGP 704

Query: 407 DQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLL 466
           + +TY +LI    K K +D+A ++L  ML+   +P+   Y+ ++DG C     +   +L+
Sbjct: 705 NVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLM 764

Query: 467 DEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRA 526
                +G   +V  Y A+I  F K  KVD    L   M   G   + V Y  L      A
Sbjct: 765 SMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAA 824

Query: 527 GEPKACSDILDDM 539
           G       +LD+M
Sbjct: 825 GLLDDAHQLLDEM 837



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 122/451 (27%), Positives = 209/451 (46%), Gaps = 28/451 (6%)

Query: 123 HDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTD 182
           H  PD  ++ +  L+  +  + + Q   + FD+M      P++   T L+++  K R   
Sbjct: 510 HVVPDVFTYTI--LIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMS 567

Query: 183 MVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEM----EFKDVR------ 232
              ++++ M+  G + N+  Y  LI   CKS  ++K  ++   M    +  DV       
Sbjct: 568 SANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKID 627

Query: 233 ------ADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRM 286
                  ++FTY  L+   CK     EA  + D M  EG  P+ + Y++LI GFC+ G++
Sbjct: 628 DGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKL 687

Query: 287 REARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSI 344
            EA+ +F  +  +G  PN  TY++LID   +   L+ AL++   M      P V+ Y  +
Sbjct: 688 DEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEM 747

Query: 345 LRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGL 404
           +  LCK G+  +A RL++ M EK   P+ VT   +I+ + K G     +++  +M   G 
Sbjct: 748 IDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGC 807

Query: 405 MLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEAL-- 462
             +  TY+ LI+  C A  +D A +LL  M    +      Y  +++G+    N E +  
Sbjct: 808 APNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGF----NREFIIS 863

Query: 463 LKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQG--NGILGDSVIYTSLA 520
           L LLDE         +  YR LI  FCK  +++ A  L   M    +    D  +Y+SL 
Sbjct: 864 LGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLI 923

Query: 521 YAYWRAGEPKACSDILDDMYRRRLMITLKIY 551
            +   A +     ++  DM +R  +  L I+
Sbjct: 924 ESLSLASKVDKAFELYADMIKRGGIPELSIF 954



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 106/387 (27%), Positives = 176/387 (45%), Gaps = 25/387 (6%)

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
           ++  K Y +M+   VV N    + L    C +   +K   ++ EM  K    D  TY+ +
Sbjct: 427 ELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKV 486

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGA 299
           I L C       A  + + M+   + PD+ TY  LI  FC+ G +++AR+ F ++   G 
Sbjct: 487 IGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGC 546

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
            PN VTYT LI  Y +A  +  A  L E+M ++G  P VVTY +++   CK G+I  A +
Sbjct: 547 APNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQ 606

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ--FTYKALIHG 417
           +   M      PD       ++ Y KI D              G + D   FTY AL+ G
Sbjct: 607 IYARMRGNADIPD-------VDMYFKIDD--------------GNIRDPNIFTYGALVDG 645

Query: 418 FCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVD 477
            CKA ++  A++LL  M   G  P++  Y  L+DG+C     +    +  +   RG   +
Sbjct: 646 LCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPN 705

Query: 478 VSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILD 537
           V  Y +LI R  K +++D A ++ + M  N    + +IYT +     + G+      ++ 
Sbjct: 706 VYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMS 765

Query: 538 DMYRRRLMITLKIYRSFSASYAKDNEI 564
            M  +     +  Y +    + K  ++
Sbjct: 766 MMEEKGCHPNVVTYTAMIDGFGKAGKV 792



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 107/423 (25%), Positives = 178/423 (42%), Gaps = 25/423 (5%)

Query: 169 TVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEF 228
           T +++ L +  L +       +M     + N+  Y +L+  C +   + + +++L  M  
Sbjct: 303 TQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMIT 362

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
           +        +N+LI  YC+ G +  A  +  +M   G  P  V YN LI G C   ++  
Sbjct: 363 EGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPS 422

Query: 289 ------ARRLFRDIKGA--TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVT 340
                 A + + ++  A    N V  + L    C A   E+A  +   M +KG  P   T
Sbjct: 423 LDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTST 482

Query: 341 YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML 400
           Y+ ++  LC   ++ +A  L  EM    + PD  T   LI+++CK+G    A K  + M+
Sbjct: 483 YSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMV 542

Query: 401 EAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEE 460
             G   +  TY ALIH + KA++M  A EL   ML  G  P+  +Y+ L+DG+C     E
Sbjct: 543 RDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIE 602

Query: 461 ALLKLLDEFVSRGLCVDVSV----------------YRALIRRFCKKEKVDYAQRLFNLM 504
              ++           DV +                Y AL+   CK  KV  A+ L ++M
Sbjct: 603 KACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVM 662

Query: 505 QGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
              G   + ++Y +L   + + G+      +   M  R     +  Y S      KD   
Sbjct: 663 SVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKR- 721

Query: 565 LDL 567
           LDL
Sbjct: 722 LDL 724



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 107/406 (26%), Positives = 176/406 (43%), Gaps = 15/406 (3%)

Query: 171 LLNSLAKDRLTDMVWKV----YKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEM 226
           LLN L +    + +W V      ++  LG   +   YN L+    ++  +D    +  EM
Sbjct: 199 LLNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREM 258

Query: 227 EFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRM 286
                  D +T    + L CK G   EALA+   +E+E    D V Y  +I G C     
Sbjct: 259 SDSGFNMDGYTLGCFVHLLCKAGRWREALAL---IEKEEFKLDTVIYTQMISGLCEASLF 315

Query: 287 REARRLFRDIKGAT--PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSI 344
            EA      ++ ++  PN VTY  L+ G  R   L    R+  +M  +G YP    +NS+
Sbjct: 316 EEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSL 375

Query: 345 LRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTAS------AMKVKNR 398
           +   C+ G    A +LL +M +    P  V  N LI   C      S      A K    
Sbjct: 376 IHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGE 435

Query: 399 MLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNN 458
           ML+A ++L++     L    C A + + A  ++  M+  GF P   +YS ++   CN + 
Sbjct: 436 MLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASK 495

Query: 459 EEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTS 518
            +    L +E  S  +  DV  Y  LI  FCK   +  A++ F+ M  +G   + V YT+
Sbjct: 496 VDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTA 555

Query: 519 LAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
           L +AY +A +  + +++ + M     +  +  Y +    + K  +I
Sbjct: 556 LIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQI 601



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 111/423 (26%), Positives = 180/423 (42%), Gaps = 20/423 (4%)

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQ--LGVVANIHLYNVLIHACCKSSDVDKVE 220
           P  HA   +L     DR+ +   +  +   +  LG      L NVLI  CC++   +   
Sbjct: 163 PVYHALLEVLGCGGNDRVPEQFLREIRDEDKEILG-----KLLNVLIRKCCRNGLWNVAL 217

Query: 221 KLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGF 280
           + L  ++    +    TYN L+ ++ +      A  V   M   G + D  T    +H  
Sbjct: 218 EELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLL 277

Query: 281 CREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVT 340
           C+ GR REA  L    +    + V YT +I G C A+  EEA+     M +    P VVT
Sbjct: 278 CKAGRWREALALIEK-EEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVT 336

Query: 341 YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML 400
           Y  +L    ++ ++    R+L+ M  +   P     N+LI+AYC+ GD + A K+  +M 
Sbjct: 337 YRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMG 396

Query: 401 EAGLMLDQFTYKALIHGFCKAKE------MDIAKELLFGMLDAGFSPSYCSYSWLVDGYC 454
           + G       Y  LI G C  ++      +++A++    MLDA    +  + S L    C
Sbjct: 397 DCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLC 456

Query: 455 NKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSV 514
                E    ++ E +S+G   D S Y  +I   C   KVD A  LF  M+ N ++ D  
Sbjct: 457 GAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVF 516

Query: 515 IYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAK------DNEILDLF 568
            YT L  ++ + G  +      D+M R      +  Y +   +Y K       NE+ ++ 
Sbjct: 517 TYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMM 576

Query: 569 WSH 571
            S 
Sbjct: 577 LSE 579


>gi|357529169|sp|Q9LMY5.3|PPR41_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g13630
          Length = 826

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 134/520 (25%), Positives = 242/520 (46%), Gaps = 52/520 (10%)

Query: 59  LSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNA 118
           LS  FFK     +  ++HS  S   + H+L   + FK  Q +LE++   +      + N+
Sbjct: 100 LSVWFFKELRD-IYAFRHSSFSTLLVSHVLAGQRRFKELQVILEQLLQEEGTLCELLSNS 158

Query: 119 LVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNS-LAK 177
             K     +    V   L+   + L+M  D L +  +M+  NL    +  T   NS L  
Sbjct: 159 FRKW----ESTGLVWDMLLFLSSRLRMVDDSLYILKKMKDQNL----NVSTQSYNSVLYH 210

Query: 178 DRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFT 237
            R TD +W VYK++       N H Y+ ++   C+   ++     L   E+KD+   + +
Sbjct: 211 FRETDKMWDVYKEIKD----KNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVS 266

Query: 238 YNTLIALYCKKGMH-----------------------------------YEALAVQDRME 262
           +N++++ YCK G                                      EAL +   M 
Sbjct: 267 FNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMN 326

Query: 263 REGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLE 320
           + G+ PD VTYN L  GF   G +  A  + RD+  KG +P+ +TYT L+ G C+  +++
Sbjct: 327 KHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNID 386

Query: 321 EALRLREVMAAKGV-YPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTL 379
             L L + M ++G     ++  + +L  LCK GRI +A  L N+M    ++PD V  + +
Sbjct: 387 MGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIV 446

Query: 380 INAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGF 439
           I+  CK+G    A+ + + M +  ++ +  T+ AL+ G C+   +  A+ LL  ++ +G 
Sbjct: 447 IHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGE 506

Query: 440 SPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQR 499
           +     Y+ ++DGY      E  L+L    +  G+   V+ + +LI  +CK + +  A++
Sbjct: 507 TLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARK 566

Query: 500 LFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
           + ++++  G+    V YT+L  AY   G  K+  ++  +M
Sbjct: 567 ILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREM 606



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 110/379 (29%), Positives = 181/379 (47%), Gaps = 14/379 (3%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           + L +F+QM+   L P L A +++++ L K    DM   +Y +M    ++ N   +  L+
Sbjct: 423 EALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALL 482

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
              C+   + +   LL  +       D+  YN +I  Y K G   EAL +   +   GI+
Sbjct: 483 LGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGIT 542

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRL 325
           P + T+NSLI+G+C+   + EAR++   IK  G  P+ V+YTTL+D Y    + +    L
Sbjct: 543 PSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDEL 602

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE------------MNEKKIAPDN 373
           R  M A+G+ P  VTY+ I + LC+  +  + N +L E            M  + I PD 
Sbjct: 603 RREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQ 662

Query: 374 VTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFG 433
           +T NT+I   C++   + A      M    L     TY  LI   C    +  A   ++ 
Sbjct: 663 ITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYS 722

Query: 434 MLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEK 493
           + +   S S  +Y+ L+  +C K + E  +KL  + + RG  V +  Y A+I R C++  
Sbjct: 723 LQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHL 782

Query: 494 VDYAQRLFNLMQGNGILGD 512
           V+ ++  F LM   GI  D
Sbjct: 783 VNESKFFFCLMLSQGISPD 801



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 110/426 (25%), Positives = 188/426 (44%), Gaps = 15/426 (3%)

Query: 143 LKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN-IH 201
           L M     +V   M    L P +   T+LL    +    DM   + K M+  G   N I 
Sbjct: 347 LGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSII 406

Query: 202 LYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRM 261
             +V++   CK+  +D+   L  +M+   +  DL  Y+ +I   CK G    AL + D M
Sbjct: 407 PCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEM 466

Query: 262 EREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDL 319
             + I P+  T+ +L+ G C++G + EAR L   +   G T + V Y  +IDGY ++  +
Sbjct: 467 CDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCI 526

Query: 320 EEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTL 379
           EEAL L +V+   G+ P V T+NS++   CK   I +A ++L+ +    +AP  V+  TL
Sbjct: 527 EEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTL 586

Query: 380 INAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKA------------KEMDIA 427
           ++AY   G+T S  +++  M   G+     TY  +  G C+             +  +  
Sbjct: 587 MDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKC 646

Query: 428 KELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRR 487
           K+ L  M   G  P   +Y+ ++   C   +       L+   SR L    + Y  LI  
Sbjct: 647 KQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDS 706

Query: 488 FCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMIT 547
            C    +  A      +Q   +      YT+L  A+   G+P+    +   +  R   ++
Sbjct: 707 LCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVS 766

Query: 548 LKIYRS 553
           ++ Y +
Sbjct: 767 IRDYSA 772



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 56/261 (21%), Positives = 115/261 (44%), Gaps = 14/261 (5%)

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           L+  Y   +   +  ++ D ++++ L P + + T L+++ A    T  + ++ ++M   G
Sbjct: 551 LIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEG 610

Query: 196 VVANIHLYNVLIHACCKSSD------------VDKVEKLLCEMEFKDVRADLFTYNTLIA 243
           +      Y+V+    C+                +K ++ L +ME + +  D  TYNT+I 
Sbjct: 611 IPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQ 670

Query: 244 LYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATP 301
             C+      A    + M+   +     TYN LI   C  G +R+A      ++    + 
Sbjct: 671 YLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSL 730

Query: 302 NHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLL 361
           +   YTTLI  +C   D E A++L   +  +G    +  Y++++ +LC+   + ++    
Sbjct: 731 SKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLVNESKFFF 790

Query: 362 NEMNEKKIAPDNVTCNTLINA 382
             M  + I+PD   C  +I +
Sbjct: 791 CLMLSQGISPDLDICEVMIKS 811


>gi|298204849|emb|CBI34156.3| unnamed protein product [Vitis vinifera]
          Length = 442

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 118/401 (29%), Positives = 200/401 (49%), Gaps = 11/401 (2%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D L  F+++   +  P +     LL S+AK +    V  +  +M   GV  N++  N+LI
Sbjct: 28  DALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILI 87

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           ++ C  + V     +L ++     + D  T+ TLI   C +G   EAL + D+M  EG  
Sbjct: 88  NSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQ 147

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDIKGAT--PNHVTYTTLIDGYCRANDLEEALRL 325
           P++VTY +LI+G C+ G    A RL R ++     P+ V YT++ID  C+   + EA  L
Sbjct: 148 PNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNL 207

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
              M  +G+ P + TY S++  LC     +    LLN+M   KI PD V  +T+++A CK
Sbjct: 208 FSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCK 267

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            G    A ++ + M++ G+  D  TY  L+ G C   EMD A ++   M+  GF+P   S
Sbjct: 268 EGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVIS 327

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS-VYRALIRRFCKKEKV---DYAQRLF 501
           Y+ L++    K +   L+ L +     GL  +     +       +K+K+   +  + L 
Sbjct: 328 YTTLINA--GKKDGGGLVSLQEVI---GLVKETPDAVKGGAVEVIRKDKMKLFEKGRTLL 382

Query: 502 NLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRR 542
           N M  + I+ + VI++++  A  + G+     D++D M +R
Sbjct: 383 NEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKR 423



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 106/431 (24%), Positives = 201/431 (46%), Gaps = 19/431 (4%)

Query: 94  FKSAQNMLEKIALR-----DFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQD 148
           F S+QN     +L      D LS+    N L+ +H  P       + L+   A +K    
Sbjct: 9   FSSSQNNFHSKSLHFNTLDDALSS---FNRLLHMHPPPSIVD--FAKLLTSIAKMKHYST 63

Query: 149 GLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIH 208
            L +  QM    + P+++   +L+NS          + V  K+++LG   +   +  LI 
Sbjct: 64  VLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIR 123

Query: 209 ACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISP 268
             C    + +   L  +M  +  + ++ TY TLI   CK G    A+ +   ME+    P
Sbjct: 124 GLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQP 183

Query: 269 DIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLR 326
           D+V Y S+I   C++ ++ EA  LF  +  +G +P+  TYT+L+   C   + +    L 
Sbjct: 184 DVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLL 243

Query: 327 EVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKI 386
             M    + P VV +++++  LCKEG++ +A+ +++ M ++ + PD VT  TL++ +C  
Sbjct: 244 NQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQ 303

Query: 387 GDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSY 446
            +   A+KV + M+  G   D  +Y  LI+   K     ++ + + G++    +P     
Sbjct: 304 SEMDEAVKVFDMMVRKGFAPDVISYTTLINAGKKDGGGLVSLQEVIGLVKE--TPDAVKG 361

Query: 447 SWLVDGYCNKNNEEALLK---LLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNL 503
             +      K+  +   K   LL+E V+  +  +V ++  ++   CK+ KV  A  + ++
Sbjct: 362 GAV--EVIRKDKMKLFEKGRTLLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDM 419

Query: 504 MQGNGILGDSV 514
           M   G+  ++V
Sbjct: 420 MIKRGVEPNAV 430



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 85/324 (26%), Positives = 149/324 (45%), Gaps = 6/324 (1%)

Query: 245 YCKKGMHY----EALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR--DIKG 298
           +  K +H+    +AL+  +R+      P IV +  L+    +         L    D  G
Sbjct: 16  FHSKSLHFNTLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFG 75

Query: 299 ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDAN 358
             PN  T   LI+ +C  N +  A  +   +   G  P   T+ +++R LC EG+I +A 
Sbjct: 76  VPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEAL 135

Query: 359 RLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGF 418
            L ++M ++   P+ VT  TLIN  CK+G+T++A+++   M +     D   Y ++I   
Sbjct: 136 HLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSL 195

Query: 419 CKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDV 478
           CK +++  A  L   M+  G SP   +Y+ LV   CN    + +  LL++ V+  +  DV
Sbjct: 196 CKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDV 255

Query: 479 SVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDD 538
            ++  ++   CK+ KV  A  + ++M   G+  D V YT+L   +    E      + D 
Sbjct: 256 VIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDM 315

Query: 539 MYRRRLMITLKIYRSFSASYAKDN 562
           M R+     +  Y +   +  KD 
Sbjct: 316 MVRKGFAPDVISYTTLINAGKKDG 339



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 106/410 (25%), Positives = 192/410 (46%), Gaps = 50/410 (12%)

Query: 13  FIKTISAIMLKGHWAKLLNPNIASSLTSTAIHK------VLLNLYNCCHIPSLSCAFFKW 66
           F K +++I    H++ +L+  +++ + S  +        +L+N +  CH+  +  AF   
Sbjct: 48  FAKLLTSIAKMKHYSTVLS--LSTQMDSFGVPPNVYTLNILINSF--CHLNRVGFAFSVL 103

Query: 67  AESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDF----LSTPSVLNALVKI 122
           A+     ++    +  T+I  L        A ++ +K+    F    ++  +++N L K+
Sbjct: 104 AKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKV 163

Query: 123 HDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTD 182
                GN                T   +++   M   N  P +   T +++SL KDR   
Sbjct: 164 -----GN----------------TSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVT 202

Query: 183 MVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLI 242
             + ++ +MV  G+  +I  Y  L+HA C   +   V  LL +M    +  D+  ++T++
Sbjct: 203 EAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVV 262

Query: 243 ALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGAT 300
              CK+G   EA  + D M + G+ PD+VTY +L+ G C +  M EA ++F  +  KG  
Sbjct: 263 DALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFA 322

Query: 301 PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNS--ILR----KLCKEGRI 354
           P+ ++YTTLI+      D    + L+EV+      P  V   +  ++R    KL ++GR 
Sbjct: 323 PDVISYTTLINA--GKKDGGGLVSLQEVIGLVKETPDAVKGGAVEVIRKDKMKLFEKGR- 379

Query: 355 RDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGL 404
                LLNEM   KI P+ V  +T+++A CK G    A  V + M++ G+
Sbjct: 380 ----TLLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGV 425



 Score =  111 bits (278), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 115/250 (46%)

Query: 317 NDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTC 376
           N L++AL     +      P +V +  +L  + K         L  +M+   + P+  T 
Sbjct: 24  NTLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTL 83

Query: 377 NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD 436
           N LIN++C +     A  V  ++L+ G   D  T+  LI G C   ++  A  L   M+D
Sbjct: 84  NILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMID 143

Query: 437 AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDY 496
            GF P+  +Y  L++G C   N  A ++LL          DV +Y ++I   CK  +V  
Sbjct: 144 EGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTE 203

Query: 497 AQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSA 556
           A  LF+ M G GI  D   YTSL +A     E K  + +L+ M   +++  + I+ +   
Sbjct: 204 AFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVD 263

Query: 557 SYAKDNEILD 566
           +  K+ ++ +
Sbjct: 264 ALCKEGKVTE 273



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 65/264 (24%), Positives = 112/264 (42%)

Query: 301 PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRL 360
           P+ V +  L+    +       L L   M + GV P V T N ++   C   R+  A  +
Sbjct: 43  PSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSV 102

Query: 361 LNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCK 420
           L ++ +    PD  T  TLI   C  G    A+ + ++M++ G   +  TY  LI+G CK
Sbjct: 103 LAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCK 162

Query: 421 AKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSV 480
                 A  LL  M      P    Y+ ++D  C          L  + V +G+  D+  
Sbjct: 163 VGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFT 222

Query: 481 YRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMY 540
           Y +L+   C   +  +   L N M  + IL D VI++++  A  + G+     +I+D M 
Sbjct: 223 YTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMI 282

Query: 541 RRRLMITLKIYRSFSASYAKDNEI 564
           +R +   +  Y +    +   +E+
Sbjct: 283 QRGVEPDVVTYTTLMDGHCLQSEM 306



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 47/194 (24%), Positives = 79/194 (40%), Gaps = 3/194 (1%)

Query: 392 AMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVD 451
           A+   NR+L          +  L+    K K       L   M   G  P+  + + L++
Sbjct: 29  ALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILIN 88

Query: 452 GYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILG 511
            +C+ N       +L + +  G   D + +  LIR  C + K+  A  LF+ M   G   
Sbjct: 89  SFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQP 148

Query: 512 DSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLF--W 569
           + V Y +L     + G   A   +L  M +      + IY S   S  KD ++ + F  +
Sbjct: 149 NVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLF 208

Query: 570 SHVVDRGLMSKHIF 583
           S +V +G+ S  IF
Sbjct: 209 SQMVGQGI-SPDIF 221


>gi|224120112|ref|XP_002331139.1| predicted protein [Populus trichocarpa]
 gi|222872867|gb|EEF09998.1| predicted protein [Populus trichocarpa]
          Length = 329

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 104/302 (34%), Positives = 166/302 (54%), Gaps = 2/302 (0%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           ++F++M    +   +H  TV++N   K   T   + ++ ++ + G+VAN+H Y  LI   
Sbjct: 22  RMFEEMCEKGIKADIHVYTVVINWNCKIGNTKRAFALFDELTEKGLVANVHTYGALIDGV 81

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           CK+ +++  E L+ EM+ + +  +   YNTLI  YCK+G+  EA  VQ  ME++G   DI
Sbjct: 82  CKAGEMEAAEILVNEMQTRGLDVNQLIYNTLIDGYCKRGLIDEAFKVQVIMEKKGFENDI 141

Query: 271 VTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
            T N++  G  +  +  EA+R    +  KG  PN V+YTTLID YC+  +  EA +L + 
Sbjct: 142 YTLNTIADGLRKLNQPEEAKRWLLTMIEKGVVPNVVSYTTLIDIYCKEGNFVEAKKLFQE 201

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M   G  P  VTYN ++    K+GR+++A  L +EM  K I PD  T  +L++  C  G 
Sbjct: 202 MKKAGGEPNAVTYNVLIDGHSKKGRMKEAYELRDEMRAKGIFPDIYTYTSLLHGECIFGK 261

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
              A+++ N + + GL L+  TY A+I G  K    + A +L   M +AG +P    Y+ 
Sbjct: 262 LDDAVELFNEVRQKGLPLNVVTYTAIISGLSKEGRSEEAFKLYDEMTEAGLTPDDRVYTS 321

Query: 449 LV 450
           LV
Sbjct: 322 LV 323



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 107/329 (32%), Positives = 169/329 (51%), Gaps = 2/329 (0%)

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
           +  Y +LI     S  +D+VE++  EM  K ++AD+  Y  +I   CK G    A A+ D
Sbjct: 1   VATYTLLIDWHGSSGKIDEVERMFEEMCEKGIKADIHVYTVVINWNCKIGNTKRAFALFD 60

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRAN 317
            +  +G+  ++ TY +LI G C+ G M  A  L  ++  +G   N + Y TLIDGYC+  
Sbjct: 61  ELTEKGLVANVHTYGALIDGVCKAGEMEAAEILVNEMQTRGLDVNQLIYNTLIDGYCKRG 120

Query: 318 DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCN 377
            ++EA +++ +M  KG    + T N+I   L K  +  +A R L  M EK + P+ V+  
Sbjct: 121 LIDEAFKVQVIMEKKGFENDIYTLNTIADGLRKLNQPEEAKRWLLTMIEKGVVPNVVSYT 180

Query: 378 TLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA 437
           TLI+ YCK G+   A K+   M +AG   +  TY  LI G  K   M  A EL   M   
Sbjct: 181 TLIDIYCKEGNFVEAKKLFQEMKKAGGEPNAVTYNVLIDGHSKKGRMKEAYELRDEMRAK 240

Query: 438 GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYA 497
           G  P   +Y+ L+ G C     +  ++L +E   +GL ++V  Y A+I    K+ + + A
Sbjct: 241 GIFPDIYTYTSLLHGECIFGKLDDAVELFNEVRQKGLPLNVVTYTAIISGLSKEGRSEEA 300

Query: 498 QRLFNLMQGNGILGDSVIYTSLAYAYWRA 526
            +L++ M   G+  D  +YTSL  +  +A
Sbjct: 301 FKLYDEMTEAGLTPDDRVYTSLVSSLHKA 329



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 101/324 (31%), Positives = 166/324 (51%), Gaps = 2/324 (0%)

Query: 169 TVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEF 228
           T+L++        D V +++++M + G+ A+IH+Y V+I+  CK  +  +   L  E+  
Sbjct: 5   TLLIDWHGSSGKIDEVERMFEEMCEKGIKADIHVYTVVINWNCKIGNTKRAFALFDELTE 64

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
           K + A++ TY  LI   CK G    A  + + M+  G+  + + YN+LI G+C+ G + E
Sbjct: 65  KGLVANVHTYGALIDGVCKAGEMEAAEILVNEMQTRGLDVNQLIYNTLIDGYCKRGLIDE 124

Query: 289 ARR--LFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILR 346
           A +  +  + KG   +  T  T+ DG  + N  EEA R    M  KGV P VV+Y +++ 
Sbjct: 125 AFKVQVIMEKKGFENDIYTLNTIADGLRKLNQPEEAKRWLLTMIEKGVVPNVVSYTTLID 184

Query: 347 KLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLML 406
             CKEG   +A +L  EM +    P+ VT N LI+ + K G    A ++++ M   G+  
Sbjct: 185 IYCKEGNFVEAKKLFQEMKKAGGEPNAVTYNVLIDGHSKKGRMKEAYELRDEMRAKGIFP 244

Query: 407 DQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLL 466
           D +TY +L+HG C   ++D A EL   +   G   +  +Y+ ++ G   +   E   KL 
Sbjct: 245 DIYTYTSLLHGECIFGKLDDAVELFNEVRQKGLPLNVVTYTAIISGLSKEGRSEEAFKLY 304

Query: 467 DEFVSRGLCVDVSVYRALIRRFCK 490
           DE    GL  D  VY +L+    K
Sbjct: 305 DEMTEAGLTPDDRVYTSLVSSLHK 328



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 93/293 (31%), Positives = 154/293 (52%), Gaps = 2/293 (0%)

Query: 131 HVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKK 190
           HV + ++ +   +  T+    +FD++    L+ ++H    L++ + K    +    +  +
Sbjct: 37  HVYTVVINWNCKIGNTKRAFALFDELTEKGLVANVHTYGALIDGVCKAGEMEAAEILVNE 96

Query: 191 MVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGM 250
           M   G+  N  +YN LI   CK   +D+  K+   ME K    D++T NT+     K   
Sbjct: 97  MQTRGLDVNQLIYNTLIDGYCKRGLIDEAFKVQVIMEKKGFENDIYTLNTIADGLRKLNQ 156

Query: 251 HYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTT 308
             EA      M  +G+ P++V+Y +LI  +C+EG   EA++LF+++K  G  PN VTY  
Sbjct: 157 PEEAKRWLLTMIEKGVVPNVVSYTTLIDIYCKEGNFVEAKKLFQEMKKAGGEPNAVTYNV 216

Query: 309 LIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKK 368
           LIDG+ +   ++EA  LR+ M AKG++P + TY S+L   C  G++ DA  L NE+ +K 
Sbjct: 217 LIDGHSKKGRMKEAYELRDEMRAKGIFPDIYTYTSLLHGECIFGKLDDAVELFNEVRQKG 276

Query: 369 IAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKA 421
           +  + VT   +I+   K G +  A K+ + M EAGL  D   Y +L+    KA
Sbjct: 277 LPLNVVTYTAIISGLSKEGRSEEAFKLYDEMTEAGLTPDDRVYTSLVSSLHKA 329



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 95/326 (29%), Positives = 156/326 (47%), Gaps = 2/326 (0%)

Query: 237 TYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI 296
           TY  LI  +   G   E   + + M  +GI  DI  Y  +I+  C+ G  + A  LF ++
Sbjct: 3   TYTLLIDWHGSSGKIDEVERMFEEMCEKGIKADIHVYTVVINWNCKIGNTKRAFALFDEL 62

Query: 297 --KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRI 354
             KG   N  TY  LIDG C+A ++E A  L   M  +G+    + YN+++   CK G I
Sbjct: 63  TEKGLVANVHTYGALIDGVCKAGEMEAAEILVNEMQTRGLDVNQLIYNTLIDGYCKRGLI 122

Query: 355 RDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKAL 414
            +A ++   M +K    D  T NT+ +   K+     A +    M+E G++ +  +Y  L
Sbjct: 123 DEAFKVQVIMEKKGFENDIYTLNTIADGLRKLNQPEEAKRWLLTMIEKGVVPNVVSYTTL 182

Query: 415 IHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGL 474
           I  +CK      AK+L   M  AG  P+  +Y+ L+DG+  K   +   +L DE  ++G+
Sbjct: 183 IDIYCKEGNFVEAKKLFQEMKKAGGEPNAVTYNVLIDGHSKKGRMKEAYELRDEMRAKGI 242

Query: 475 CVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSD 534
             D+  Y +L+   C   K+D A  LFN ++  G+  + V YT++     + G  +    
Sbjct: 243 FPDIYTYTSLLHGECIFGKLDDAVELFNEVRQKGLPLNVVTYTAIISGLSKEGRSEEAFK 302

Query: 535 ILDDMYRRRLMITLKIYRSFSASYAK 560
           + D+M    L    ++Y S  +S  K
Sbjct: 303 LYDEMTEAGLTPDDRVYTSLVSSLHK 328



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 85/312 (27%), Positives = 147/312 (47%), Gaps = 4/312 (1%)

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLRE 327
           + TY  LI      G++ E  R+F ++  KG   +   YT +I+  C+  + + A  L +
Sbjct: 1   VATYTLLIDWHGSSGKIDEVERMFEEMCEKGIKADIHVYTVVINWNCKIGNTKRAFALFD 60

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
            +  KG+   V TY +++  +CK G +  A  L+NEM  + +  + +  NTLI+ YCK G
Sbjct: 61  ELTEKGLVANVHTYGALIDGVCKAGEMEAAEILVNEMQTRGLDVNQLIYNTLIDGYCKRG 120

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
               A KV+  M + G   D +T   +  G  K  + + AK  L  M++ G  P+  SY+
Sbjct: 121 LIDEAFKVQVIMEKKGFENDIYTLNTIADGLRKLNQPEEAKRWLLTMIEKGVVPNVVSYT 180

Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGN 507
            L+D YC + N     KL  E    G   +   Y  LI    KK ++  A  L + M+  
Sbjct: 181 TLIDIYCKEGNFVEAKKLFQEMKKAGGEPNAVTYNVLIDGHSKKGRMKEAYELRDEMRAK 240

Query: 508 GILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDL 567
           GI  D   YTSL +     G+     ++ +++ ++ L + +  Y +  +  +K+    + 
Sbjct: 241 GIFPDIYTYTSLLHGECIFGKLDDAVELFNEVRQKGLPLNVVTYTAIISGLSKEGRSEEA 300

Query: 568 F--WSHVVDRGL 577
           F  +  + + GL
Sbjct: 301 FKLYDEMTEAGL 312


>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 901

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 139/580 (23%), Positives = 264/580 (45%), Gaps = 35/580 (6%)

Query: 14  IKTISAIMLKGHWAKLLNPNIASSLT---STAIHKVLLNLYNCCHIPSLSCAFFKWAESA 70
           +  +  I+  G+W     P++ ++L+    +    +++ +       + + ++F+W E  
Sbjct: 66  VDDVCKILESGNWG----PDVENALSLFVESPKTDLVIGVLRRAKDVNQAISYFRWTERK 121

Query: 71  VPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNS 130
             +     +++ +++ ++ KN  F   + +L ++++  F   PS    +           
Sbjct: 122 T-DQALCPEAYDSLLLVMAKNVKFDYFEQILGEMSIAGF--GPSTKTCIE---------- 168

Query: 131 HVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKK 190
                L++        ++G  +   MR     P   A T L+ +L+  + +D++  ++ +
Sbjct: 169 -----LILSCIKSNKLREGFDLIQCMRKFKFRPAFSAYTTLIGALSSVQESDIMLTLFHQ 223

Query: 191 MVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGM 250
           M +LG   ++HL+  +I    +   +D    LL EM+   + AD+  YN  I  + K G 
Sbjct: 224 MQELGYEVSVHLFTTVIRVFAREGRLDAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGK 283

Query: 251 HYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKG--ATPNHVTYTT 308
              A      ++  G+ PD VTY S+I   C+  R+ EA  +F  ++     P    Y T
Sbjct: 284 VDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNT 343

Query: 309 LIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKK 368
           +I GY  A   +EA  L E   A+G  P V+ YN IL  L K+GR+ +A R   EM +K 
Sbjct: 344 MIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEM-KKD 402

Query: 369 IAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAK 428
            AP+  T N LI+  CK G+  +A KV++ M EAGL  +  T   +I   CKAK++D A 
Sbjct: 403 AAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEAC 462

Query: 429 ELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRF 488
            +  GM     SP   ++  L+DG   +   +   +L ++ +      +  VY +LI+ F
Sbjct: 463 SIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSF 522

Query: 489 CKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM--- 545
            K  + +   ++F  M   G   D  +  +     ++AGE      + +++  R  +   
Sbjct: 523 FKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDV 582

Query: 546 --ITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIF 583
              ++ I+    A +A+  E  +LF++      ++  H +
Sbjct: 583 MSYSILIHGLVKAGFAR--ETYELFYAMKEQGCVLDTHAY 620



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 107/419 (25%), Positives = 197/419 (47%), Gaps = 3/419 (0%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           + +++F+QM  +  +P  +A   ++         D  + + ++    G + ++  YN ++
Sbjct: 321 EAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCIL 380

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
               K   + +  +   EM+ KD   +L TYN LI + CK G    A  V+D M+  G+ 
Sbjct: 381 TCLGKKGRLGEALRTFEEMK-KDAAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLF 439

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
           P+++T N +I   C+  ++ EA  +F  +  K  +P+ VT+ +LIDG  +   +++A RL
Sbjct: 440 PNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRL 499

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
            E M      P  V Y S+++   K GR  D +++  EM  +  +PD    N  ++   K
Sbjct: 500 YEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFK 559

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            G+T     +   +   G + D  +Y  LIHG  KA       EL + M + G      +
Sbjct: 560 AGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHA 619

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+  +DG+C         +LL+E  ++G    V  Y ++I    K +++D A  LF   +
Sbjct: 620 YNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK 679

Query: 506 GNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
            NG+  + VIY+SL   + + G       I++++ ++ L   +  +     +  K  EI
Sbjct: 680 SNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEI 738



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 98/378 (25%), Positives = 171/378 (45%), Gaps = 2/378 (0%)

Query: 144 KMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLY 203
           K   +   +F+ M      P       L++ L K    D  +++Y++M+    + N  +Y
Sbjct: 456 KKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVY 515

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER 263
             LI +  K    +   K+  EM  +    DL   N  +    K G   +  A+ + ++ 
Sbjct: 516 TSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKS 575

Query: 264 EGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEE 321
            G  PD+++Y+ LIHG  + G  RE   LF  +K  G   +   Y T IDG+C++  + +
Sbjct: 576 RGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNK 635

Query: 322 ALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
           A +L E M  KG  P VVTY S++  L K  R+ +A  L  E     +  + V  ++LI+
Sbjct: 636 AYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLID 695

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
            + K+G    A  +   +++ GL  + +T+  L+    KA+E++ A      M +   +P
Sbjct: 696 GFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTP 755

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
           ++ +YS L++G C             E   +GL  +   Y  +I    K   +  A  LF
Sbjct: 756 NHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLF 815

Query: 502 NLMQGNGILGDSVIYTSL 519
              + NG + DS  Y ++
Sbjct: 816 ERFKANGGVPDSASYNAI 833



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 112/434 (25%), Positives = 190/434 (43%), Gaps = 20/434 (4%)

Query: 84  MIHILTKNKHFKSAQNMLE----KIALRDFLSTPSVLNALVK--------------IHDD 125
           MI  L K K    A ++ E    KI   D ++  S+++ L K              +  D
Sbjct: 448 MIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSD 507

Query: 126 PDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVW 185
              N+ V + L+  +      +DG ++F +M      P L      ++ + K   T    
Sbjct: 508 KIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGR 567

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
            +++++   G + ++  Y++LIH   K+    +  +L   M+ +    D   YNT I  +
Sbjct: 568 ALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGF 627

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNH 303
           CK G   +A  + + M+ +G  P +VTY S+I G  +  R+ EA  LF + K  G   N 
Sbjct: 628 CKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNV 687

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
           V Y++LIDG+ +   ++EA  + E +  KG+ P V T+N +L  L K   I +A      
Sbjct: 688 VIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQN 747

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
           M   K  P+++T + LIN  C++     A      M + GL  +  TY  +I G  KA  
Sbjct: 748 MKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGN 807

Query: 424 MDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRA 483
           +  A  L       G  P   SY+ +++G           K+ +E   +G  +      A
Sbjct: 808 IAEASSLFERFKANGGVPDSASYNAIIEGLSYSRRAMEAYKIFEETRMKGCNIHTKTCIA 867

Query: 484 LIRRFCKKEKVDYA 497
           L+    K E ++ A
Sbjct: 868 LLDALQKDECLEQA 881



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 94/363 (25%), Positives = 169/363 (46%), Gaps = 2/363 (0%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D  ++++QM   + +P+    T L+ S  K    +   K++K+M+  G   ++ L N  +
Sbjct: 495 DAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYM 554

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
               K+ +  K   L  E++ +    D+ +Y+ LI    K G   E   +   M+ +G  
Sbjct: 555 DCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCV 614

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRL 325
            D   YN+ I GFC+ G++ +A +L  ++K  G  P  VTY ++IDG  + + L+EA  L
Sbjct: 615 LDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYML 674

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
            E   + G+   VV Y+S++    K GRI +A  ++ E+ +K + P+  T N L++A  K
Sbjct: 675 FEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVK 734

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
             +   A+     M       +  TY  LI+G C+ ++ + A      M   G  P+  +
Sbjct: 735 AEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTIT 794

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+ ++ G     N      L + F + G   D + Y A+I       +   A ++F   +
Sbjct: 795 YTTMIAGLAKAGNIAEASSLFERFKANGGVPDSASYNAIIEGLSYSRRAMEAYKIFEETR 854

Query: 506 GNG 508
             G
Sbjct: 855 MKG 857



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 100/421 (23%), Positives = 184/421 (43%), Gaps = 3/421 (0%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           + L+ F++M+  +  P+L    VL++ L K    +  +KV   M + G+  N+   N++I
Sbjct: 391 EALRTFEEMK-KDAAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMI 449

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
              CK+  +D+   +   M  K    D  T+ +LI    K+G   +A  + ++M      
Sbjct: 450 DRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKI 509

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
           P+ V Y SLI  F + GR  +  ++F+++  +G +P+       +D   +A +  +   L
Sbjct: 510 PNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRAL 569

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
            E + ++G  P V++Y+ ++  L K G  R+   L   M E+    D    NT I+ +CK
Sbjct: 570 FEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCK 629

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            G    A ++   M   G      TY ++I G  K   +D A  L       G   +   
Sbjct: 630 SGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVI 689

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           YS L+DG+      +    +++E + +GL  +V  +  L+    K E+++ A   F  M+
Sbjct: 690 YSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMK 749

Query: 506 GNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEIL 565
                 + + Y+ L     R  +         +M ++ L      Y +  A  AK   I 
Sbjct: 750 NLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIA 809

Query: 566 D 566
           +
Sbjct: 810 E 810


>gi|225428276|ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
           [Vitis vinifera]
 gi|297744485|emb|CBI37747.3| unnamed protein product [Vitis vinifera]
          Length = 878

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 121/481 (25%), Positives = 220/481 (45%), Gaps = 55/481 (11%)

Query: 130 SHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYK 189
           ++ L+ L+    +    +D  +VFD+M V    P+  +  +L+    +  L+    ++  
Sbjct: 151 TYTLNLLIAGLCDSGRFEDAREVFDKMGVKGCRPNEFSFGILVRGYCRAGLSMRALELLD 210

Query: 190 KMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKG 249
            M   GV  N  +YN LI + C+    ++ E+L+  M    +  D+ T+N+ I+  C  G
Sbjct: 211 GMGSFGVQPNKVIYNTLISSFCREGRNEEAERLVERMREDGLFPDVVTFNSRISALCSAG 270

Query: 250 MHYEALAVQDRM---EREGIS-PDIVTYNSLIHGFCREGRMREARRLFRDI--------- 296
              EA  +   M   E  G+  P+I T+N ++ GFC+EG + EA+ L   +         
Sbjct: 271 KILEASRIFRDMQIDEELGLPRPNITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLMEL 330

Query: 297 ----------------------------KGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
                                       KG  PN  ++ T++DG C+   + +A  +  +
Sbjct: 331 ESYNIWLLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGL 390

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M + G+ P  VTY+++L   C  G++  AN +L+EM  +  +P+  TCN L+++  K G 
Sbjct: 391 MISSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKEGR 450

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
              A K+  +M E    LD  T   +I G CK+ ++D A E++ GM             W
Sbjct: 451 IFEAEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGM-------------W 497

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCV-DVSVYRALIRRFCKKEKVDYAQRLFNLMQGN 507
           +       N   + + L+D   +   C+ D+  Y  +I   CK  ++D A++ F  M G 
Sbjct: 498 IHGSAALGNLGNSFIGLVDSSSNGKKCLPDLITYSIIINGLCKAGRLDEARKKFIEMVGK 557

Query: 508 GILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDL 567
            +  DS+IY +  +++ + G+  +   +L DM +R    +L+ Y S        N+I ++
Sbjct: 558 SLHPDSIIYDTFIHSFCKHGKISSAFRVLKDMEKRGCNKSLQTYNSLILGLGSKNQIFEI 617

Query: 568 F 568
           +
Sbjct: 618 Y 618



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 112/496 (22%), Positives = 211/496 (42%), Gaps = 64/496 (12%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N      LV  Y    ++   L++ D M    + P+      L++S  ++   +   ++ 
Sbjct: 185 NEFSFGILVRGYCRAGLSMRALELLDGMGSFGVQPNKVIYNTLISSFCREGRNEEAERLV 244

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKD----VRADLFTYNTLIAL 244
           ++M + G+  ++  +N  I A C +  + +  ++  +M+  +     R ++ T+N ++  
Sbjct: 245 ERMREDGLFPDVVTFNSRISALCSAGKILEASRIFRDMQIDEELGLPRPNITTFNLMLEG 304

Query: 245 YCKKGMHYEALAVQDRMER-----------------------------------EGISPD 269
           +CK+GM  EA  + + M+R                                   +GI P+
Sbjct: 305 FCKEGMLEEAKTLVESMKRNGNLMELESYNIWLLGLVRNGKLLEAQLALKEMVDKGIEPN 364

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLRE 327
           I ++N+++ G C+ G + +AR +   +   G  P+ VTY+TL+ G C    + +A  +  
Sbjct: 365 IYSFNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNILH 424

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
            M  +G  P   T N +L  L KEGRI +A +LL +MNE+    DNVTCN +I+  CK G
Sbjct: 425 EMMRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNERSYDLDNVTCNIVIDGLCKSG 484

Query: 388 DTASAMKVKNRMLEAG-----------------------LMLDQFTYKALIHGFCKAKEM 424
               A+++   M   G                        + D  TY  +I+G CKA  +
Sbjct: 485 KLDEAVEIVEGMWIHGSAALGNLGNSFIGLVDSSSNGKKCLPDLITYSIIINGLCKAGRL 544

Query: 425 DIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRAL 484
           D A++    M+     P    Y   +  +C      +  ++L +   RG    +  Y +L
Sbjct: 545 DEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKISSAFRVLKDMEKRGCNKSLQTYNSL 604

Query: 485 IRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL 544
           I     K ++     L + M+  GI  +   Y ++       G  K  + +LD+M ++ +
Sbjct: 605 ILGLGSKNQIFEIYGLLDDMKEKGITPNICTYNNMISCLCEGGRIKDATSLLDEMLQKGI 664

Query: 545 MITLKIYRSFSASYAK 560
              +  +R    ++ K
Sbjct: 665 SPNISSFRLLIKAFCK 680



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 103/403 (25%), Positives = 187/403 (46%), Gaps = 25/403 (6%)

Query: 126 PDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVW 185
           P  N    + ++  +    M ++   + + M+ +  +  L +  + L  L ++       
Sbjct: 291 PRPNITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLMELESYNIWLLGLVRNGKLLEAQ 350

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
              K+MV  G+  NI+ +N ++   CK+  +     ++  M    +  D  TY+TL+   
Sbjct: 351 LALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVTYSTLLHGC 410

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNH 303
           C  G   +A  +   M R G SP+  T N L+H   +EGR+ EA +L + +  +    ++
Sbjct: 411 CSTGKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNERSYDLDN 470

Query: 304 VTYTTLIDGYCRANDLEEALRLREVM-----------------------AAKGVYPGVVT 340
           VT   +IDG C++  L+EA+ + E M                         K   P ++T
Sbjct: 471 VTCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLGNSFIGLVDSSSNGKKCLPDLIT 530

Query: 341 YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML 400
           Y+ I+  LCK GR+ +A +   EM  K + PD++  +T I+++CK G  +SA +V   M 
Sbjct: 531 YSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKISSAFRVLKDME 590

Query: 401 EAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEE 460
           + G      TY +LI G     ++     LL  M + G +P+ C+Y+ ++   C     +
Sbjct: 591 KRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITPNICTYNNMISCLCEGGRIK 650

Query: 461 ALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNL 503
               LLDE + +G+  ++S +R LI+ FCK       + +F +
Sbjct: 651 DATSLLDEMLQKGISPNISSFRLLIKAFCKASDFGVVKEVFEI 693



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 106/382 (27%), Positives = 179/382 (46%), Gaps = 10/382 (2%)

Query: 170 VLLNSLAKDRLTDMVWKVYKKMVQLGVVAN---IHLYNVLIHACCKSSDVDKVEKLLCEM 226
            L+  LAK  L+D+ +  ++   +  V AN   ++LYN+++ +  +   VD    L  +M
Sbjct: 84  ALIRILAKSGLSDLAFSQFQSF-RSQVPANPPPVYLYNMVLESSLREDKVDSFSWLYKDM 142

Query: 227 EFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRM 286
               V  + +T N LIA  C  G   +A  V D+M  +G  P+  ++  L+ G+CR G  
Sbjct: 143 VVAGVSPETYTLNLLIAGLCDSGRFEDAREVFDKMGVKGCRPNEFSFGILVRGYCRAGLS 202

Query: 287 REARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSI 344
             A  L   +   G  PN V Y TLI  +CR    EEA RL E M   G++P VVT+NS 
Sbjct: 203 MRALELLDGMGSFGVQPNKVIYNTLISSFCREGRNEEAERLVERMREDGLFPDVVTFNSR 262

Query: 345 LRKLCKEGRIRDANRLLNEMN-EKKIA---PDNVTCNTLINAYCKIGDTASAMKVKNRML 400
           +  LC  G+I +A+R+  +M  ++++    P+  T N ++  +CK G    A  +   M 
Sbjct: 263 ISALCSAGKILEASRIFRDMQIDEELGLPRPNITTFNLMLEGFCKEGMLEEAKTLVESMK 322

Query: 401 EAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEE 460
             G +++  +Y   + G  +  ++  A+  L  M+D G  P+  S++ ++DG C      
Sbjct: 323 RNGNLMELESYNIWLLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGLIS 382

Query: 461 ALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLA 520
               ++   +S G+  D   Y  L+   C   KV  A  + + M   G   ++     L 
Sbjct: 383 DARMIMGLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCNILL 442

Query: 521 YAYWRAGEPKACSDILDDMYRR 542
           ++ W+ G       +L  M  R
Sbjct: 443 HSLWKEGRIFEAEKLLQKMNER 464



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 98/416 (23%), Positives = 188/416 (45%), Gaps = 29/416 (6%)

Query: 151 QVFDQMRVHNLM----PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           ++F  M++   +    P++    ++L    K+ + +    + + M + G +  +  YN+ 
Sbjct: 277 RIFRDMQIDEELGLPRPNITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLMELESYNIW 336

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           +    ++  + + +  L EM  K +  +++++NT++   CK G+  +A  +   M   GI
Sbjct: 337 LLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMISSGI 396

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
            PD VTY++L+HG C  G++ +A  +  ++  +G +PN  T   L+    +   + EA +
Sbjct: 397 GPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEK 456

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM-------------------- 364
           L + M  +      VT N ++  LCK G++ +A  ++  M                    
Sbjct: 457 LLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLGNSFIGLVD 516

Query: 365 ---NEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKA 421
              N KK  PD +T + +IN  CK G    A K    M+   L  D   Y   IH FCK 
Sbjct: 517 SSSNGKKCLPDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKH 576

Query: 422 KEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVY 481
            ++  A  +L  M   G + S  +Y+ L+ G  +KN    +  LLD+   +G+  ++  Y
Sbjct: 577 GKISSAFRVLKDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITPNICTY 636

Query: 482 RALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILD 537
             +I   C+  ++  A  L + M   GI  +   +  L  A+ +A +     ++ +
Sbjct: 637 NNMISCLCEGGRIKDATSLLDEMLQKGISPNISSFRLLIKAFCKASDFGVVKEVFE 692



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 98/385 (25%), Positives = 170/385 (44%), Gaps = 62/385 (16%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           +  +M      P+ + C +LL+SL K+       K+ +KM +     +    N++I   C
Sbjct: 422 ILHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNERSYDLDNVTCNIVIDGLC 481

Query: 212 KSSDVDKVEKLLCEM-----------------------EFKDVRADLFTYNTLIALYCKK 248
           KS  +D+  +++  M                         K    DL TY+ +I   CK 
Sbjct: 482 KSGKLDEAVEIVEGMWIHGSAALGNLGNSFIGLVDSSSNGKKCLPDLITYSIIINGLCKA 541

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTY 306
           G   EA      M  + + PD + Y++ IH FC+ G++  A R+ +D+  +G   +  TY
Sbjct: 542 GRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKISSAFRVLKDMEKRGCNKSLQTY 601

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
            +LI G    N + E   L + M  KG+ P + TYN+++  LC+ GRI+DA  LL+EM +
Sbjct: 602 NSLILGLGSKNQIFEIYGLLDDMKEKGITPNICTYNNMISCLCEGGRIKDATSLLDEMLQ 661

Query: 367 KKIAPDNVTCNTLINAYCKI----------------------------------GDTASA 392
           K I+P+  +   LI A+CK                                   G+ + A
Sbjct: 662 KGISPNISSFRLLIKAFCKASDFGVVKEVFEIALSICGHKEALYSLMFNELLIGGEVSEA 721

Query: 393 MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
            ++ +  L+    L  F Y  LI   CK + ++ A ++L  M+D G+     S+  ++DG
Sbjct: 722 KELFDAALDRCFDLGNFQYNDLIEKLCKDEMLENASDILHKMIDKGYRFDPASFMPVIDG 781

Query: 453 Y---CNKNNEEALLKLLDEFVSRGL 474
                 K++ + L + + +  S G+
Sbjct: 782 LGKRGKKHDADELAERMMDMASEGM 806



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 61/248 (24%), Positives = 114/248 (45%), Gaps = 6/248 (2%)

Query: 336 PGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKV 395
           P V  YN +L    +E ++   + L  +M    ++P+  T N LI   C  G    A +V
Sbjct: 114 PPVYLYNMVLESSLREDKVDSFSWLYKDMVVAGVSPETYTLNLLIAGLCDSGRFEDAREV 173

Query: 396 KNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCN 455
            ++M   G   ++F++  L+ G+C+A     A ELL GM   G  P+   Y+ L+  +C 
Sbjct: 174 FDKMGVKGCRPNEFSFGILVRGYCRAGLSMRALELLDGMGSFGVQPNKVIYNTLISSFCR 233

Query: 456 KNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILG---- 511
           +   E   +L++     GL  DV  + + I   C   K+  A R+F  MQ +  LG    
Sbjct: 234 EGRNEEAERLVERMREDGLFPDVVTFNSRISALCSAGKILEASRIFRDMQIDEELGLPRP 293

Query: 512 DSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD--LFW 569
           +   +  +   + + G  +    +++ M R   ++ L+ Y  +     ++ ++L+  L  
Sbjct: 294 NITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLMELESYNIWLLGLVRNGKLLEAQLAL 353

Query: 570 SHVVDRGL 577
             +VD+G+
Sbjct: 354 KEMVDKGI 361


>gi|326505926|dbj|BAJ91202.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 669

 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 105/387 (27%), Positives = 188/387 (48%), Gaps = 1/387 (0%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N      LV F+    M +  +QV  QM  H   P+   C +++N++ K    D  +   
Sbjct: 280 NEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFL 339

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
             M   G   +   Y  ++   C++   +  ++LL EM  K+   +  T+NT I + C+K
Sbjct: 340 NNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQK 399

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYTT 308
           G+  +A+ + + M   G S  IVTYN+L+HGFC +GR+  A  LF ++    PN +TYTT
Sbjct: 400 GLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLP-CEPNTITYTT 458

Query: 309 LIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKK 368
           L+ G C A  L+ A  L   M  K      VT+N ++   C++G + +A  L+N+M E  
Sbjct: 459 LLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHG 518

Query: 369 IAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAK 428
             P+ +T NTL++   K  ++  A+++ + ++  G+ LD  TY +++    +    + A 
Sbjct: 519 CTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAI 578

Query: 429 ELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRF 488
           ++L  + D G  P    Y+ ++   C +   +  +      VS G   + S Y  LI   
Sbjct: 579 QMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGL 638

Query: 489 CKKEKVDYAQRLFNLMQGNGILGDSVI 515
             +  +  A+ + + +   G+L  S++
Sbjct: 639 AHEGLLKEARYVLSELYAKGVLSKSLL 665



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 120/445 (26%), Positives = 195/445 (43%), Gaps = 46/445 (10%)

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
           P ++ CT L+ +L +   T    +V +     G   ++  YN L+   C+   +D   +L
Sbjct: 72  PDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNTLVAGYCRYGRLDAARRL 131

Query: 223 LCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR 282
           +  M    V  D +TY  +I   C +G   +ALA+ D M + G  P +VTY  L+   C+
Sbjct: 132 IASMP---VPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEAVCK 188

Query: 283 EGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVT 340
                EA  +  ++  KG TPN VTY  +I+G CR   +++A  +   +++ G  P +V+
Sbjct: 189 SSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVS 248

Query: 341 YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVT------------------------- 375
           Y ++L+ LC   R  D   L  EM +KK  P+ VT                         
Sbjct: 249 YTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMS 308

Query: 376 ----------CNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMD 425
                     CN +INA CK G    A    N M   G   D  +Y  ++ G C+A   +
Sbjct: 309 QHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWE 368

Query: 426 IAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
            AKELL  M+     P+  +++  +   C K   E  +KL++     G  V +  Y AL+
Sbjct: 369 HAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALV 428

Query: 486 RRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL- 544
             FC + +VD A  LFN +       +++ YT+L      A    A +++L  M ++   
Sbjct: 429 HGFCVQGRVDSALELFNNLPCE---PNTITYTTLLTGLCHAERLDAAAELLAGMIQKDCP 485

Query: 545 --MITLKIYRSFSASYAKDNEILDL 567
              +T  +  SF        E ++L
Sbjct: 486 LNAVTFNVLVSFFCQKGFVEEAMEL 510



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 106/374 (28%), Positives = 173/374 (46%), Gaps = 5/374 (1%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D L + D M      P +   TVLL ++ K         V  +M   G   NI  YNV+I
Sbjct: 159 DALALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVII 218

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           +  C+   VD  +++L  +     + D+ +Y T++   C      +   +   M  +   
Sbjct: 219 NGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCV 278

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRL 325
           P+ VT++ L+  FCR G +  A ++ + +   G TPN      +I+  C+   +++A   
Sbjct: 279 PNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDF 338

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
              M   G  P  ++Y ++LR LC+ GR   A  LL EM  K   P+ VT NT I   C+
Sbjct: 339 LNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQ 398

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            G    A+K+   M E G  +   TY AL+HGFC    +D A E LF  L     P+  +
Sbjct: 399 KGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALE-LFNNLPC--EPNTIT 455

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+ L+ G C+    +A  +LL   + +   ++   +  L+  FC+K  V+ A  L N M 
Sbjct: 456 YTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMM 515

Query: 506 GNGILGDSVIYTSL 519
            +G   + + + +L
Sbjct: 516 EHGCTPNLITFNTL 529



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 116/485 (23%), Positives = 205/485 (42%), Gaps = 71/485 (14%)

Query: 132 VLSWLVIFYANLKMTQDG--LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYK 189
           V+++ V+  A  K +  G  + V D+MR     P++    V++N + ++   D   ++  
Sbjct: 176 VVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILN 235

Query: 190 KMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKG 249
           ++   G   +I  Y  ++   C +   D V+ L  EM  K    +  T++ L+  +C+ G
Sbjct: 236 RLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGG 295

Query: 250 MHYEALAVQDRMEREGISP-----------------------------------DIVTYN 274
           M   A+ V  +M + G +P                                   D ++Y 
Sbjct: 296 MVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYT 355

Query: 275 SLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAK 332
           +++ G CR GR   A+ L  ++  K   PN VT+ T I   C+   +E+A++L E+M   
Sbjct: 356 TVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEY 415

Query: 333 GVYPGVVTYN--------------------------------SILRKLCKEGRIRDANRL 360
           G   G+VTYN                                ++L  LC   R+  A  L
Sbjct: 416 GCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCEPNTITYTTLLTGLCHAERLDAAAEL 475

Query: 361 LNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCK 420
           L  M +K    + VT N L++ +C+ G    AM++ N+M+E G   +  T+  L+ G  K
Sbjct: 476 LAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITK 535

Query: 421 AKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSV 480
               + A ELL G++  G S    +YS +VD    ++  E  +++L      G+   V +
Sbjct: 536 DCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGM 595

Query: 481 YRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMY 540
           Y  ++   CK+ + D A   F  M  NG + +   Y  L       G  K    +L ++Y
Sbjct: 596 YNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARYVLSELY 655

Query: 541 RRRLM 545
            + ++
Sbjct: 656 AKGVL 660



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 98/203 (48%), Gaps = 3/203 (1%)

Query: 317 NDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTC 376
           +DL EA RL E  +++G  P V     ++R LC+ GR  DA R+L          D    
Sbjct: 53  DDLAEAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAY 112

Query: 377 NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD 436
           NTL+  YC+ G   +A ++   M    +  D +TY  +I G C    +  A  LL  ML 
Sbjct: 113 NTLVAGYCRYGRLDAARRLIASM---PVPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQ 169

Query: 437 AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDY 496
            G  PS  +Y+ L++  C  +     + +LDE  ++G   ++  Y  +I   C++ +VD 
Sbjct: 170 RGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDD 229

Query: 497 AQRLFNLMQGNGILGDSVIYTSL 519
           A+ + N +   G   D V YT++
Sbjct: 230 AKEILNRLSSYGFQPDIVSYTTV 252



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/249 (23%), Positives = 110/249 (44%), Gaps = 9/249 (3%)

Query: 345 LRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGL 404
           LR+L     + +A RL+   + +  APD   C  LI   C+ G T+ A +V      +G 
Sbjct: 46  LRRLIARDDLAEAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGA 105

Query: 405 MLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLK 464
            +D F Y  L+ G+C+   +D A+ L+  M      P   +Y+ ++ G C++      L 
Sbjct: 106 PVDVFAYNTLVAGYCRYGRLDAARRLIASM---PVPPDAYTYTPIIRGLCDRGRVGDALA 162

Query: 465 LLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYW 524
           LLD+ + RG    V  Y  L+   CK      A  + + M+  G   + V Y  +     
Sbjct: 163 LLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMC 222

Query: 525 RAGEPKACSDILDDM----YRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSK 580
           R G      +IL+ +    ++  ++    + +   A+   D+  + + ++ +VD+  +  
Sbjct: 223 REGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDD--VKVLFAEMVDKKCVPN 280

Query: 581 HIFKEMQLR 589
            +  +M +R
Sbjct: 281 EVTFDMLVR 289


>gi|242043130|ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
 gi|241922813|gb|EER95957.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
          Length = 684

 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 110/359 (30%), Positives = 185/359 (51%), Gaps = 3/359 (0%)

Query: 169 TVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEF 228
           TV+   LA+ +L     ++Y+ M   G   ++H YN+L+H  CK        ++L EME 
Sbjct: 321 TVIRGCLAEGKLARAT-ELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEE 379

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
           K    ++ TY+TL+  +C+ GM  +A A+ D+M  +G S +   YN +I+   ++G++ E
Sbjct: 380 KGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDE 439

Query: 289 ARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILR 346
           A RL +++K  G  P+  TY T+I   C  + ++EA  +   +  +GV    +TYN+++ 
Sbjct: 440 AMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIH 499

Query: 347 KLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLML 406
            L   GR ++  RL NEM       D V+ N LI A CK G+   +M +   M+  G+  
Sbjct: 500 ALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKP 559

Query: 407 DQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLL 466
           + F+Y  LI+  CKA ++  A EL   ML+ G +P   +Y+ L++G C      A L LL
Sbjct: 560 NNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLL 619

Query: 467 DEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWR 525
           ++  +  +  D+  Y  LI   CK   +D A  L +     GI+ +   +  +   + R
Sbjct: 620 EKLPNENVHPDIVTYNILISWHCKVRLLDDASMLLDKAVSGGIVPNERTWGMMVQNFVR 678



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 110/386 (28%), Positives = 184/386 (47%), Gaps = 6/386 (1%)

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           +V+    L   ++  ++ D+M +H   P +     LL  L + R  D  + +  ++ ++ 
Sbjct: 256 VVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAMLGRVPEVN 315

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
           VV    + N +I  C     + +  +L   M  K    D+ TYN L+   CK G    A+
Sbjct: 316 VV----MLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAV 371

Query: 256 AVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGY 313
            + D ME +G +P+IVTY++L+H FCR G   +AR +   +  KG + N   Y  +I   
Sbjct: 372 RMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYAL 431

Query: 314 CRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDN 373
            +   L+EA+RL + M ++G  P + TYN+I+  LC   ++ +A  +   + E+ +  + 
Sbjct: 432 GKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANG 491

Query: 374 VTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFG 433
           +T NTLI+A    G     +++ N M+  G  LD  +Y  LI   CK   +D +  LL  
Sbjct: 492 ITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEE 551

Query: 434 MLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEK 493
           M+  G  P+  SY+ L++  C        L+L  E +++GL  D+  Y  LI   CK   
Sbjct: 552 MMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGW 611

Query: 494 VDYAQRLFNLMQGNGILGDSVIYTSL 519
              A  L   +    +  D V Y  L
Sbjct: 612 THAALNLLEKLPNENVHPDIVTYNIL 637



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 111/418 (26%), Positives = 183/418 (43%), Gaps = 39/418 (9%)

Query: 187 VYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYC 246
           + + M + G V +  LY  +IHA      V +   LL EM      AD+ T+N ++   C
Sbjct: 202 LLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCAADVNTFNDVVLGLC 261

Query: 247 KKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR------------------------ 282
             G   EA  + DRM   G +P +VTY  L+ G CR                        
Sbjct: 262 GLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAMLGRVPEVNVVMLNT 321

Query: 283 -------EGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKG 333
                  EG++  A  L+  +  KG  P+  TY  L+ G C+      A+R+ + M  KG
Sbjct: 322 VIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKG 381

Query: 334 VYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAM 393
             P +VTY+++L   C+ G   DA  +L++M+ K  + ++   N +I A  K G    AM
Sbjct: 382 CAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAM 441

Query: 394 KVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGY 453
           ++   M   G   D  TY  +I+  C   +MD A+ +   +L+ G   +  +Y+ L+   
Sbjct: 442 RLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHAL 501

Query: 454 CNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDS 513
            +    +  L+L +E V  G  +DV  Y  LI+  CK+  VD +  L   M   GI  ++
Sbjct: 502 LHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNN 561

Query: 514 VIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSH 571
             Y  L     +AG+ +   ++  +M  + L   +  Y +        N +  + W+H
Sbjct: 562 FSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLI------NGLCKVGWTH 613



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 164/328 (50%), Gaps = 2/328 (0%)

Query: 131 HVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKK 190
           H  + L+     L      +++ D+M      P++   + LL+S  ++ + D    +  +
Sbjct: 352 HTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQ 411

Query: 191 MVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGM 250
           M   G   N   YN +I+A  K   +D+  +L+ EM+ +  + D+ TYNT+I   C    
Sbjct: 412 MSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQ 471

Query: 251 HYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTT 308
             EA  +   +  EG+  + +TYN+LIH     GR +E  RL  +  + G   + V+Y  
Sbjct: 472 MDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNG 531

Query: 309 LIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKK 368
           LI   C+  +++ ++ L E M  KG+ P   +YN ++ +LCK G++RDA  L  EM  + 
Sbjct: 532 LIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQG 591

Query: 369 IAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAK 428
           + PD VT NTLIN  CK+G T +A+ +  ++    +  D  TY  LI   CK + +D A 
Sbjct: 592 LTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAS 651

Query: 429 ELLFGMLDAGFSPSYCSYSWLVDGYCNK 456
            LL   +  G  P+  ++  +V  +  +
Sbjct: 652 MLLDKAVSGGIVPNERTWGMMVQNFVRQ 679



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 105/381 (27%), Positives = 174/381 (45%), Gaps = 7/381 (1%)

Query: 150 LQVFDQM-RVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIH 208
           L + DQM R   + P   +   +L++LA+         +Y++M++  V      + V   
Sbjct: 129 LHLLDQMPRRFAVTPSFRSYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAAR 188

Query: 209 ACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISP 268
           A C+         LL  M       D   Y T+I     +G   EA  + D M   G + 
Sbjct: 189 ALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCAA 248

Query: 269 DIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEALRLR 326
           D+ T+N ++ G C  G +REA RL     + G TP+ VTY  L+ G CR    +EA    
Sbjct: 249 DVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAY--- 305

Query: 327 EVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKI 386
             M  +     VV  N+++R    EG++  A  L   M  K   PD  T N L++  CK+
Sbjct: 306 -AMLGRVPEVNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKL 364

Query: 387 GDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSY 446
           G   SA+++ + M E G   +  TY  L+H FC+    D A+ +L  M   GFS +   Y
Sbjct: 365 GRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGY 424

Query: 447 SWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQG 506
           + ++         +  ++L+ E  S+G   D+  Y  +I   C  +++D A+ +F  +  
Sbjct: 425 NGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLE 484

Query: 507 NGILGDSVIYTSLAYAYWRAG 527
            G++ + + Y +L +A   +G
Sbjct: 485 EGVVANGITYNTLIHALLHSG 505



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 100/356 (28%), Positives = 166/356 (46%), Gaps = 6/356 (1%)

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
           ++  +M+  G   ++  Y  L+   C++   D+   +L  +       ++   NT+I   
Sbjct: 271 RLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAMLGRVP----EVNVVMLNTVIRGC 326

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNH 303
             +G    A  + + M  +G  PD+ TYN L+HG C+ GR   A R+  ++  KG  PN 
Sbjct: 327 LAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNI 386

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
           VTY+TL+  +CR    ++A  + + M+AKG       YN I+  L K+G++ +A RL+ E
Sbjct: 387 VTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQE 446

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
           M  +   PD  T NT+I   C       A  +   +LE G++ +  TY  LIH    +  
Sbjct: 447 MKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGR 506

Query: 424 MDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRA 483
                 L   M+  G      SY+ L+   C + N +  + LL+E +++G+  +   Y  
Sbjct: 507 WQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNM 566

Query: 484 LIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
           LI   CK  KV  A  L   M   G+  D V Y +L     + G   A  ++L+ +
Sbjct: 567 LINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKL 622



 Score =  121 bits (304), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 79/308 (25%), Positives = 148/308 (48%), Gaps = 19/308 (6%)

Query: 80  SHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIF 139
           ++ T++H   +N  +  A+ ML++++ + F                   NS   + ++  
Sbjct: 388 TYSTLLHSFCRNGMWDDARAMLDQMSAKGF-----------------SMNSQGYNGIIYA 430

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
                   + +++  +M+     P +     ++  L  +   D    ++  +++ GVVAN
Sbjct: 431 LGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVAN 490

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
              YN LIHA   S    +  +L  EM       D+ +YN LI   CK+G    ++ + +
Sbjct: 491 GITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLE 550

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRAN 317
            M  +GI P+  +YN LI+  C+ G++R+A  L +++  +G TP+ VTY TLI+G C+  
Sbjct: 551 EMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVG 610

Query: 318 DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCN 377
               AL L E +  + V+P +VTYN ++   CK   + DA+ LL++     I P+  T  
Sbjct: 611 WTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDASMLLDKAVSGGIVPNERTWG 670

Query: 378 TLINAYCK 385
            ++  + +
Sbjct: 671 MMVQNFVR 678



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 75/296 (25%), Positives = 120/296 (40%), Gaps = 31/296 (10%)

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
           TP+  +Y  ++    RA+   +AL L   M    V P   T+    R LC+ GR RDA  
Sbjct: 142 TPSFRSYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRARDALA 201

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
           LL  M      PD V   T+I+A    G  A A  + + ML  G   D  T+  ++ G C
Sbjct: 202 LLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCAADVNTFNDVVLGLC 261

Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYC-NKNNEEA----------------- 461
               +  A  L+  M+  G +PS  +Y +L+ G C  +  +EA                 
Sbjct: 262 GLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAMLGRVPEVNVVMLNT 321

Query: 462 -------------LLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG 508
                          +L +   S+G   DV  Y  L+   CK  +   A R+ + M+  G
Sbjct: 322 VIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKG 381

Query: 509 ILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
              + V Y++L +++ R G       +LD M  +   +  + Y     +  KD ++
Sbjct: 382 CAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKL 437



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 65/247 (26%), Positives = 118/247 (47%), Gaps = 27/247 (10%)

Query: 75  KHSLQSHWTMIHILTKNKHFKSAQ----NMLEKIALRDFLSTPSVLNALVKIHDDPDGNS 130
           K  + ++ T+I+ L  N     A+    N+LE+  + + ++  ++++AL+          
Sbjct: 453 KPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALL---------- 502

Query: 131 HVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKK 190
           H   W           Q+GL++ ++M +H     + +   L+ +L K+   D    + ++
Sbjct: 503 HSGRW-----------QEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEE 551

Query: 191 MVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGM 250
           M+  G+  N   YN+LI+  CK+  V    +L  EM  + +  D+ TYNTLI   CK G 
Sbjct: 552 MMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGW 611

Query: 251 HYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTT 308
            + AL + +++  E + PDIVTYN LI   C+   + +A  L       G  PN  T+  
Sbjct: 612 THAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDASMLLDKAVSGGIVPNERTWGM 671

Query: 309 LIDGYCR 315
           ++  + R
Sbjct: 672 MVQNFVR 678


>gi|449443698|ref|XP_004139614.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Cucumis sativus]
          Length = 732

 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 135/483 (27%), Positives = 209/483 (43%), Gaps = 43/483 (8%)

Query: 125 DPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMV 184
           +P   S+ L   ++   N    Q    VF  M    + P +    +++ +L      D  
Sbjct: 180 EPTFKSYDLVLEILVTGNCP--QVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSA 237

Query: 185 WKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIAL 244
             + + M + G V N  +Y  LIHA  + + V +  KLL EM       D+ T+N +I  
Sbjct: 238 CSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHG 297

Query: 245 YCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGATPNHV 304
            CK    ++A  + DRM   G  PD +TY  L+HG CR G++ EAR++   IK   PN+ 
Sbjct: 298 LCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKIL--IKIPCPNNA 355

Query: 305 TYTTLIDGYCRANDLEEALR-LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
              TLI+GY  +  L+EA   L E M   G  P + TYN ++  LCKEG +  A  L+NE
Sbjct: 356 ILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNE 415

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLML----------------- 406
           M+ +   P+ +T   L+N  CK G    A  V + M   GL +                 
Sbjct: 416 MSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEK 475

Query: 407 ------------------DQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
                             D FTY +LI+G CK   +D A  L   ML  G   +  +Y+ 
Sbjct: 476 VHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNT 535

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG 508
           L+     +   +  L L+++ + RG  +D   Y  LI+ FCK   ++    L+  M  +G
Sbjct: 536 LIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDG 595

Query: 509 ILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI---L 565
           +  D++    +     + G+     + L D   R  +  +  Y S      K   I   L
Sbjct: 596 LGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEAL 655

Query: 566 DLF 568
           +LF
Sbjct: 656 NLF 658



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 118/434 (27%), Positives = 198/434 (45%), Gaps = 36/434 (8%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           NS V   L+   +      + L++ ++M V   MP +     +++ L K        K+ 
Sbjct: 252 NSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLV 311

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEM-------------------EFK 229
            +M+  G   +   Y  L+H  C+   +++  K+L ++                   + K
Sbjct: 312 DRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPCPNNAILNTLINGYVMSGQLK 371

Query: 230 DVRA-------------DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSL 276
           + ++             D+FTYN L+   CK+G    A  + + M R G  P+++TY  L
Sbjct: 372 EAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAIL 431

Query: 277 IHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGV 334
           ++G C+ G + EA  +  ++  +G T N V Y  LI   CR   +  AL L   M  KG 
Sbjct: 432 VNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGC 491

Query: 335 YPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMK 394
            P + TYNS++  LCK  RI +A RL + M       +NVT NTLI+A  + G    A+ 
Sbjct: 492 KPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALT 551

Query: 395 VKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYC 454
           + N ML  G  LD+ TY  LI  FCK   ++   EL   M+  G      S + +++G C
Sbjct: 552 LVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLC 611

Query: 455 NKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSV 514
                +   + L + ++RG   D+  Y +++   CK  ++  A  LF+ +Q  G+  D+ 
Sbjct: 612 KVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAF 671

Query: 515 IYTSLAYAYWRAGE 528
            Y +  +  W+  E
Sbjct: 672 TYNT--FISWQCKE 683



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 125/478 (26%), Positives = 217/478 (45%), Gaps = 19/478 (3%)

Query: 81  HWTMIHILTKNKHFKSAQNMLEKI----ALRDFLSTPSVLNALVKIHDDPDGNSHVLSWL 136
           + T+IH L++      A  +LE++     + D  +   V++ L K++   D    V   L
Sbjct: 256 YQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRML 315

Query: 137 VIFYANLKMTQDGLQVFDQMRVHNL-----------MPHLHACTVLLNS-LAKDRLTDMV 184
           +  +    MT  G  +    R+  L            P+      L+N  +   +L +  
Sbjct: 316 LRGFYPDNMTY-GFLLHGLCRIGKLNEARKILIKIPCPNNAILNTLINGYVMSGQLKEAQ 374

Query: 185 WKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIAL 244
             + + M+  G   +I  YN+L+H  CK   +     L+ EM  +    ++ TY  L+  
Sbjct: 375 SFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNG 434

Query: 245 YCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPN 302
            CK G+  EA  V   M   G++ + V YN LI   CR+ ++  A  L  ++  KG  P+
Sbjct: 435 LCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPD 494

Query: 303 HVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLN 362
             TY +LI G C+ + ++EA RL   M   G     VTYN+++  L + G  + A  L+N
Sbjct: 495 LFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVN 554

Query: 363 EMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAK 422
           +M  +    D +T N LI A+CK+G+    +++  +M+  GL  D  +   +I+G CK  
Sbjct: 555 DMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVG 614

Query: 423 EMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYR 482
           ++D A E L   ++ GF P   +Y+ +++G C     +  L L D     G+  D   Y 
Sbjct: 615 KVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYN 674

Query: 483 ALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMY 540
             I   CK+  V+ A   F     NG +  ++ +  L Y   +    +    +LD+++
Sbjct: 675 TFISWQCKEGMVNDACLFFYRGIENGFVPSNLTWNVLVYTLLKQSNQENNFFVLDELW 732



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 136/558 (24%), Positives = 237/558 (42%), Gaps = 28/558 (5%)

Query: 25  HWAKLLNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAE--SAVPNYKHSLQSHW 82
            W  LL P   + L  + I    + L     +P       +  E       Y H+   ++
Sbjct: 57  EWESLLEPFDLTKLRKSHILITPVQLCKLLELPLDVPTLLEIFERVGGQKGYCHTFDVYY 116

Query: 83  TMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYAN 142
             I+ L     FK    +L ++     +   S+   ++K +         +  L+     
Sbjct: 117 VFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLL----- 171

Query: 143 LKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHL 202
                      D   V+   P   +  ++L  L       +   V+  M+  GV   +  
Sbjct: 172 -----------DMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFT 220

Query: 203 YNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRME 262
           + +++ A C  ++VD    LL +M       +   Y TLI    +K    EAL + + M 
Sbjct: 221 FGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMF 280

Query: 263 REGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLE 320
             G  PD+ T+N +IHG C+  ++ +A +L     ++G  P+++TY  L+ G CR   L 
Sbjct: 281 VMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLN 340

Query: 321 EALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE-MNEKKIAPDNVTCNTL 379
           EA   R+++  K   P     N+++      G++++A   LNE M      PD  T N L
Sbjct: 341 EA---RKIL-IKIPCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNIL 396

Query: 380 INAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGF 439
           ++  CK G  + A  + N M   G   +  TY  L++G CKA  ++ A  +L  M   G 
Sbjct: 397 MHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGL 456

Query: 440 SPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQR 499
           + +   Y+ L+   C K      L LL E  ++G   D+  Y +LI   CK +++D A R
Sbjct: 457 TINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFR 516

Query: 500 LFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYA 559
           LF+ M  +G + ++V Y +L +A  R G  +    +++DM  R   +    Y     ++ 
Sbjct: 517 LFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFC 576

Query: 560 KDNEI---LDLFWSHVVD 574
           K   I   L+L+   ++D
Sbjct: 577 KVGNIEKGLELYEQMIMD 594


>gi|224108788|ref|XP_002314968.1| predicted protein [Populus trichocarpa]
 gi|222864008|gb|EEF01139.1| predicted protein [Populus trichocarpa]
          Length = 662

 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 125/502 (24%), Positives = 227/502 (45%), Gaps = 25/502 (4%)

Query: 59  LSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNA 118
           L+  FFK   ++  ++KH+  ++ TMI  L   +     Q +L+ + L            
Sbjct: 55  LALHFFKSIANS-NSFKHTPLTYTTMIKRLGYERDIDGIQYLLQLMKLEGI--------- 104

Query: 119 LVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKD 178
                     N  +   ++  Y    + +  L+ F ++      P +     +L++L  +
Sbjct: 105 --------SCNEDLFVIVINAYRRAGLAEQALKTFYRIGEFGCKPSVKIYNHVLDALLSE 156

Query: 179 RLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTY 238
               M+  +Y  M + G+  N++ YN+L+ A CK+  VD   KLL EM +K    D  +Y
Sbjct: 157 NKFQMINGIYNNMKRDGIELNVYTYNMLLKALCKNDRVDAARKLLAEMSYKGCIPDAVSY 216

Query: 239 NTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--I 296
            T+++  C+ G   EA  +  R     I   +  YN+LI+GFCRE +M E   LF +  +
Sbjct: 217 TTVVSSMCRLGKVEEARELSMR-----IKSFVPVYNALINGFCREHKMEEVFELFNEMAV 271

Query: 297 KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRD 356
           +G  P+ +TY+T+I+      ++E AL +   M  +G  P V T+ S+++     GR+ +
Sbjct: 272 EGIDPDVITYSTVINTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCE 331

Query: 357 ANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIH 416
           A  L N M ++   P+ V  NTLI+  C  G    A+ V  +M   G+  ++ TY  LI 
Sbjct: 332 ALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLID 391

Query: 417 GFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCV 476
           GF KA ++  A E+   M+  G  P+   Y+ +VD  C  +     L L++   +     
Sbjct: 392 GFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPP 451

Query: 477 DVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDIL 536
           +   +   I+  C   K ++A ++ N M+  G   +   Y  +    + A   +    I+
Sbjct: 452 NTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIV 511

Query: 537 DDMYRRRLMITLKIYRSFSASY 558
            ++    +   L  Y +  + +
Sbjct: 512 GEIEEMEIKSNLVTYNTILSGF 533



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 104/372 (27%), Positives = 185/372 (49%), Gaps = 8/372 (2%)

Query: 155 QMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSS 214
            MR+ + +P  +A   L+N   ++   + V++++ +M   G+  ++  Y+ +I+   +  
Sbjct: 236 SMRIKSFVPVYNA---LINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMG 292

Query: 215 DVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYN 274
           +V+    +L +M  +    ++ T+ +L+  Y   G   EAL + +RM +EG  P+ V YN
Sbjct: 293 NVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYN 352

Query: 275 SLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAK 332
           +LIHG C  G+M EA  + + ++  G  PN  TY+TLIDG+ +A DL  A  +   M   
Sbjct: 353 TLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITN 412

Query: 333 GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
           G  P VV Y  ++  LC+      A  L+  M      P+ +T NT I   C  G T  A
Sbjct: 413 GCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWA 472

Query: 393 MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
           MKV N+M + G   +  TY  ++ G   AK    A +++  + +     +  +Y+ ++ G
Sbjct: 473 MKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSG 532

Query: 453 YCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM--QGNGIL 510
           +C+    +  L++  + +  G   D   Y  +I  +CK+ +V  A +L + +  +G G  
Sbjct: 533 FCHAGMFKGALQIAGKLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLVDRLTKKGEG-Y 591

Query: 511 GDSVIYTSLAYA 522
            D   YTSL + 
Sbjct: 592 PDVFTYTSLLWG 603



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 113/460 (24%), Positives = 215/460 (46%), Gaps = 53/460 (11%)

Query: 84  MIHILTKNKHFKSAQNMLEKIALR----DFLSTPSVLNA---LVKIHDDPDGNSHVLSWL 136
           ++  L KN    +A+ +L +++ +    D +S  +V+++   L K+ +  + +  + S++
Sbjct: 184 LLKALCKNDRVDAARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEARELSMRIKSFV 243

Query: 137 VIFYANL-------KMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYK 189
            ++ A +       KM ++  ++F++M V  + P +   + ++N+L++    +M   V  
Sbjct: 244 PVYNALINGFCREHKM-EEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVLA 302

Query: 190 KMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKG 249
           KM   G   N+H +  L+        + +   L   M  +    +   YNTLI   C  G
Sbjct: 303 KMFLRGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYG 362

Query: 250 MHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYT 307
              EA++V  +MER G+ P+  TY++LI GF + G +  A  ++  +   G  PN V YT
Sbjct: 363 KMVEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYT 422

Query: 308 TLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEG--------------- 352
            ++D  CR +    AL L E MA     P  +T+N+ ++ LC  G               
Sbjct: 423 CMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQY 482

Query: 353 --------------------RIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
                               R R+A +++ E+ E +I  + VT NT+++ +C  G    A
Sbjct: 483 GCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCHAGMFKGA 542

Query: 393 MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFS-PSYCSYSWLVD 451
           +++  ++L  G   D  TY  +I+ +CK  E+  A +L+  +   G   P   +Y+ L+ 
Sbjct: 543 LQIAGKLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLVDRLTKKGEGYPDVFTYTSLLW 602

Query: 452 GYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
           G CN    +  +  LD+ ++ G+C + + + AL+R    K
Sbjct: 603 GVCNWIGVDEAVVHLDKMINEGICPNRATWNALVRGLFSK 642



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 90/345 (26%), Positives = 168/345 (48%), Gaps = 2/345 (0%)

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
           + +YN LI+  C+   +++V +L  EM  + +  D+ TY+T+I    + G    ALAV  
Sbjct: 243 VPVYNALINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVLA 302

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRAN 317
           +M   G SP++ T+ SL+ G+   GR+ EA  L+  +  +G+ PN V Y TLI G C   
Sbjct: 303 KMFLRGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYG 362

Query: 318 DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCN 377
            + EA+ + + M   GV+P   TY++++    K G +  A+ + N+M      P+ V   
Sbjct: 363 KMVEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYT 422

Query: 378 TLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA 437
            +++  C+      A+ +   M       +  T+   I G C + + + A ++L  M   
Sbjct: 423 CMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQY 482

Query: 438 GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYA 497
           G +P+  +Y+ ++DG  N       L+++ E     +  ++  Y  ++  FC       A
Sbjct: 483 GCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCHAGMFKGA 542

Query: 498 QRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRR 542
            ++   +   G   DS+ Y ++ YAY + GE K    ++D + ++
Sbjct: 543 LQIAGKLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLVDRLTKK 587



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 87/352 (24%), Positives = 155/352 (44%), Gaps = 19/352 (5%)

Query: 236 FTYNTLIALYCKKGMHYEALAVQ---DRMEREGISPDIVTYNSLIHGFCREGRMREARRL 292
            TY T+I    + G   +   +Q     M+ EGIS +   +  +I+ + R G   +A + 
Sbjct: 74  LTYTTMIK---RLGYERDIDGIQYLLQLMKLEGISCNEDLFVIVINAYRRAGLAEQALKT 130

Query: 293 FRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
           F  I   G  P+   Y  ++D     N  +    +   M   G+   V TYN +L+ LCK
Sbjct: 131 FYRIGEFGCKPSVKIYNHVLDALLSENKFQMINGIYNNMKRDGIELNVYTYNMLLKALCK 190

Query: 351 EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
             R+  A +LL EM+ K   PD V+  T++++ C++G    A ++  R       +  F 
Sbjct: 191 NDRVDAARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEARELSMR-------IKSFV 243

Query: 411 --YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
             Y ALI+GFC+  +M+   EL   M   G  P   +YS +++      N E  L +L +
Sbjct: 244 PVYNALINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVLAK 303

Query: 469 FVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
              RG   +V  + +L++ +    ++  A  L+N M   G   ++V Y +L +     G+
Sbjct: 304 MFLRGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGK 363

Query: 529 PKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDL--FWSHVVDRGLM 578
                 +   M R  +      Y +    +AK  +++     W+ ++  G +
Sbjct: 364 MVEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCL 415


>gi|302755068|ref|XP_002960958.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
 gi|300171897|gb|EFJ38497.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
          Length = 479

 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 114/365 (31%), Positives = 177/365 (48%), Gaps = 12/365 (3%)

Query: 168 CTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEME 227
           C  LL+ L + R ++ +  V++++       N   Y  L+ A C++  +DK    + EM 
Sbjct: 3   CNALLDLLERARRSEQIVVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEMA 62

Query: 228 FKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMR 287
            + +  D+FTYN +I   CK      A+   + M      PD+VTYN+L+ G C+ GR+ 
Sbjct: 63  REKLVPDVFTYNVVIDTLCKARRISRAIEFFETMP----EPDVVTYNTLLGGLCKNGRVA 118

Query: 288 EARRLFRDIKGA--TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSIL 345
           +A  LF  ++GA  TP+ VTYTTLID +C+    E A  L ++MA++   P V +Y SI+
Sbjct: 119 QACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSII 178

Query: 346 RKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLM 405
             LCK  ++  A +L  EM      PD VT NTLI+  C       A  +   M+E G  
Sbjct: 179 NGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENGFQ 238

Query: 406 LDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKL 465
            D+ T+ ALI G C    +  A  L  GM   G +P   +++ LV   C        L +
Sbjct: 239 PDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCILRKLRPALSV 298

Query: 466 LDEFVSRGLCVD-VSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL--AYA 522
           +  + +   C + V +Y  + R   ++   D A RL   M   G+  + V YT+      
Sbjct: 299 VRNYPA---CPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVPPNVVTYTAFFKGLG 355

Query: 523 YWRAG 527
            W+ G
Sbjct: 356 DWKEG 360



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 121/447 (27%), Positives = 192/447 (42%), Gaps = 31/447 (6%)

Query: 67  AESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDP 126
           AE A       + ++  +I  L K +    A    E +   D ++  ++L  L K     
Sbjct: 59  AEMAREKLVPDVFTYNVVIDTLCKARRISRAIEFFETMPEPDVVTYNTLLGGLCK----- 113

Query: 127 DGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWK 186
                          N ++ Q    +F  M    + P     T L++   K    +  + 
Sbjct: 114 ---------------NGRVAQ-ACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYG 157

Query: 187 VYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYC 246
           + + M        ++ Y  +I+  CK+  VD+  +L  EM+    + D  TYNTLI   C
Sbjct: 158 LLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLC 217

Query: 247 KKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHV 304
            K   +EA  +   M   G  PD +T+ +LI G C   R++EA  LF+ +  +G  P+ V
Sbjct: 218 VKQRLHEAKDLLTVMVENGFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLV 277

Query: 305 TYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM 364
           T+T L+   C    L  AL +  V         V+ Y  I R+L +      A RLL +M
Sbjct: 278 THTVLVSKLCILRKLRPALSV--VRNYPACPEAVILYTPIFRELGRRRGFDRAARLLQKM 335

Query: 365 NEKKIAPDNVTCNTLINAYCKIGDTASAMKVKN---RMLEAGLMLDQFTYKALIHGFCKA 421
             + + P+ VT          +GD    M+      RMLE G+  D   Y  L+ GFCKA
Sbjct: 336 ARRGVPPNVVTYTAFFKG---LGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKA 392

Query: 422 KEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVY 481
             +D+A++++  M  +G  P+  +Y+ LV  +C K   EA+ +LL   VSRG   DV+ +
Sbjct: 393 DRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATW 452

Query: 482 RALIRRFCKKEKVDYAQRLFNLMQGNG 508
             L+       + D A    NL    G
Sbjct: 453 STLVAGLFMVGQADAAYSFLNLAMSQG 479



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 105/426 (24%), Positives = 182/426 (42%), Gaps = 39/426 (9%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           VF ++   +  P+  +   L+ +L +    D       +M +  +V ++  YNV+I   C
Sbjct: 22  VFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLC 81

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           K+  + +  +    M   DV     TYNTL+   CK G   +A ++   ME  GI+P  V
Sbjct: 82  KARRISRAIEFFETMPEPDV----VTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDV 137

Query: 272 TYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           TY +LI  FC+  +   A  L + +  +  +P   +Y ++I+G C+   +++A +L E M
Sbjct: 138 TYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEM 197

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
              G  P  VTYN+++  LC + R+ +A  LL  M E    PD +T   LI   C     
Sbjct: 198 KLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENGFQPDKITFTALIEGLCTTDRI 257

Query: 390 ASAMKVKNRMLEAGLMLDQFTYKALIHGFC------------------------------ 419
             A  +   M + G   D  T+  L+   C                              
Sbjct: 258 KEAFVLFQGMAKQGCAPDLVTHTVLVSKLCILRKLRPALSVVRNYPACPEAVILYTPIFR 317

Query: 420 ---KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCV 476
              + +  D A  LL  M   G  P+  +Y+    G  +        +     + +G+  
Sbjct: 318 ELGRRRGFDRAARLLQKMARRGVPPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEP 377

Query: 477 DVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDIL 536
           D+  Y  L+  FCK +++D A+++   M  +G+  + V Y +L   + R G+ +A  ++L
Sbjct: 378 DMVAYNVLVDGFCKADRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELL 437

Query: 537 DDMYRR 542
             M  R
Sbjct: 438 HTMVSR 443



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 88/327 (26%), Positives = 150/327 (45%), Gaps = 6/327 (1%)

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
           +D + +  +Y  L+   C+ G   +A +    M RE + PD+ TYN +I   C+  R+  
Sbjct: 29  QDCKPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISR 88

Query: 289 ARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
           A   F  +    P+ VTY TL+ G C+   + +A  L   M   G+ P  VTY +++   
Sbjct: 89  AIEFFETM--PEPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVF 146

Query: 349 CKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ 408
           CK  +   A  LL  M  +K +P   +  ++IN  CK      A ++   M  AG   D+
Sbjct: 147 CKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDR 206

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
            TY  LIHG C  + +  AK+LL  M++ GF P   +++ L++G C  +  +    L   
Sbjct: 207 VTYNTLIHGLCVKQRLHEAKDLLTVMVENGFQPDKITFTALIEGLCTTDRIKEAFVLFQG 266

Query: 469 FVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVI-YTSLAYAYWRAG 527
              +G   D+  +  L+ + C   K+  A    ++++      ++VI YT +     R  
Sbjct: 267 MAKQGCAPDLVTHTVLVSKLCILRKLRPA---LSVVRNYPACPEAVILYTPIFRELGRRR 323

Query: 528 EPKACSDILDDMYRRRLMITLKIYRSF 554
                + +L  M RR +   +  Y +F
Sbjct: 324 GFDRAARLLQKMARRGVPPNVVTYTAF 350



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 67/219 (30%), Positives = 102/219 (46%), Gaps = 4/219 (1%)

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
           VT   L+D   RA   E+ + +   + ++   P  ++Y  +++ LC+ G+I  A   + E
Sbjct: 1   VTCNALLDLLERARRSEQIVVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAE 60

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
           M  +K+ PD  T N +I+  CK    + A++    M E     D  TY  L+ G CK   
Sbjct: 61  MAREKLVPDVFTYNVVIDTLCKARRISRAIEFFETMPEP----DVVTYNTLLGGLCKNGR 116

Query: 424 MDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRA 483
           +  A  L   M  AG +PS  +Y+ L+D +C     E    LL    SR     V  Y +
Sbjct: 117 VAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCS 176

Query: 484 LIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYA 522
           +I   CK  KVD A +LF  M+  G   D V Y +L + 
Sbjct: 177 IINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHG 215



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 65/299 (21%), Positives = 117/299 (39%), Gaps = 31/299 (10%)

Query: 42  AIHKVLLNLYNCCHIPSLSC-------AFFKWAESAVPNYKHSLQSHWTMIHILTKNKHF 94
           A  K    +Y+ C I +  C       A+  + E  +   K    ++ T+IH L   +  
Sbjct: 163 ASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRL 222

Query: 95  KSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLK------MTQD 148
             A+++L  +    F        AL++     D    +    V+F    K      +   
Sbjct: 223 HEAKDLLTVMVENGFQPDKITFTALIEGLCTTD---RIKEAFVLFQGMAKQGCAPDLVTH 279

Query: 149 GLQVFDQMRVHNLMPHLH------AC-------TVLLNSLAKDRLTDMVWKVYKKMVQLG 195
            + V     +  L P L       AC       T +   L + R  D   ++ +KM + G
Sbjct: 280 TVLVSKLCILRKLRPALSVVRNYPACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRG 339

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
           V  N+  Y           +  +  +    M  + +  D+  YN L+  +CK      A 
Sbjct: 340 VPPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKADRLDMAE 399

Query: 256 AVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDG 312
            +   M++ G+ P+IVTYN+L+   CR+G++     L   +  +G  P+  T++TL+ G
Sbjct: 400 KMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTLVAG 458



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/215 (21%), Positives = 84/215 (39%), Gaps = 16/215 (7%)

Query: 374 VTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFG 433
           VTCN L++   +   +   + V  R+       +  +Y  L+   C+  ++D A   +  
Sbjct: 1   VTCNALLDLLERARRSEQIVVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAE 60

Query: 434 MLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEK 493
           M      P   +Y+ ++D  C        ++  +         DV  Y  L+   CK  +
Sbjct: 61  MAREKLVPDVFTYNVVIDTLCKARRISRAIEFFETMPEP----DVVTYNTLLGGLCKNGR 116

Query: 494 VDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRS 553
           V  A  LF  M+G GI    V YT+L   + +  + +    +L  M  R+   T+  Y S
Sbjct: 117 VAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCS 176

Query: 554 FSASYAKDNEILDLFWSHVVDRGLMSKHIFKEMQL 588
                 K+ ++   +             +F+EM+L
Sbjct: 177 IINGLCKNRKVDQAY------------QLFEEMKL 199


>gi|449508997|ref|XP_004163464.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Cucumis sativus]
          Length = 732

 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 155/611 (25%), Positives = 247/611 (40%), Gaps = 76/611 (12%)

Query: 25  HWAKLLNPNIASSLTSTAIHKVLLNLYNCCH-------IPSLSCAFFKWAESAVPNYKHS 77
            W  LL P     LT     ++L+     C        +P+L   F +        Y H+
Sbjct: 57  EWESLLEP---FDLTKLRKSRILITPVQLCKLLELPLDVPTLLEIFERVGGQK--GYCHT 111

Query: 78  LQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHD------------- 124
              ++  I+ L     FK    +L ++     +   S+   ++K +              
Sbjct: 112 FDVYYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLL 171

Query: 125 --------DPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLA 176
                   +P   S+ L   ++   N    Q    VF  M    + P +    +++ +L 
Sbjct: 172 DMRAVYLCEPTFKSYDLVLEILVTGNCP--QVATNVFYDMLSKGVSPTVFTFGIVMKALC 229

Query: 177 KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLF 236
                D    + + M + G V N  +Y  LIHA  + + V +  KLL EM       D+ 
Sbjct: 230 MFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQ 289

Query: 237 TYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI 296
           T+N +I   CK    ++A  + DRM   G  PD +TY  L+HG CR G++ EAR++   I
Sbjct: 290 TFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKIL--I 347

Query: 297 KGATPNHVTYTTLIDGYCRANDLEEALR-LREVMAAKGVYPGVVTYNSILRKLCKEGRIR 355
           K   PN+    TLI+GY  +  L+EA   L E M   G  P + TYN ++  LCKEG + 
Sbjct: 348 KIPCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLS 407

Query: 356 DANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLML--------- 406
            A  L+NEM+ +   P+ +T   L+N  CK G    A  V + M   GL +         
Sbjct: 408 FARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLI 467

Query: 407 --------------------------DQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFS 440
                                     D FTY +LI+G CK   +D A  L   ML  G  
Sbjct: 468 CALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAV 527

Query: 441 PSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRL 500
            +  +Y+ L+     +   +  L L+++ + RG  +D   Y  LI+ FCK   ++    L
Sbjct: 528 ANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLEL 587

Query: 501 FNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAK 560
           +  M  +G+  D++    +     + G+     + L D   R  +  +  Y S      K
Sbjct: 588 YEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCK 647

Query: 561 DNEI---LDLF 568
              I   L+LF
Sbjct: 648 VGRIKEALNLF 658



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 129/483 (26%), Positives = 215/483 (44%), Gaps = 44/483 (9%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           NS V   L+   +      + L++ ++M V   MP +     +++ L K        K+ 
Sbjct: 252 NSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLV 311

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEM-------------------EFK 229
            +M+  G   +   Y  L+H  C+   +++  K+L ++                   + K
Sbjct: 312 DRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPCPNNAILNTLINGYVMSGQLK 371

Query: 230 DVRA-------------DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSL 276
           + ++             D+FTYN L+   CK+G    A  + + M R G  P+++TY  L
Sbjct: 372 EAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAIL 431

Query: 277 IHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGV 334
           ++G C+ G + EA  +  ++  +G T N V Y  LI   CR   +  AL L   M  KG 
Sbjct: 432 VNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGC 491

Query: 335 YPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMK 394
            P + TYNS++  LCK  RI +A RL + M       +NVT NTLI+A  + G    A+ 
Sbjct: 492 KPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALT 551

Query: 395 VKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYC 454
           + N ML  G  LD+ TY  LI  FCK   ++   EL   M+  G      S + +++G C
Sbjct: 552 LVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLC 611

Query: 455 NKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSV 514
                +   + L + ++RG   D+  Y +++   CK  ++  A  LF+ +Q  G+  D+ 
Sbjct: 612 KVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAF 671

Query: 515 IYTSLAYAYWRAGEP---KACS----DILDDMYRRRLMITLKIYRSFSASYAKDN-EILD 566
            Y +  +  W+  E     ACS     I +      L   + +Y     S  ++N  +LD
Sbjct: 672 TYNT--FISWQCKEGMVNDACSFFYRGIENGFVPSNLTWNVLVYTLLKQSNQENNFFVLD 729

Query: 567 LFW 569
             W
Sbjct: 730 ELW 732


>gi|357140210|ref|XP_003571663.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Brachypodium distachyon]
          Length = 841

 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 99/381 (25%), Positives = 196/381 (51%), Gaps = 18/381 (4%)

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           C    +D   KL+C    + V   +  +N L+A Y K+G   +AL V   M + G+ P  
Sbjct: 397 CWDGRLDDAWKLVCSAIEQGVPVSVAGFNALVAAYSKEGFDEQALEVYSVMNKIGLVPSS 456

Query: 271 VTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
            T+N LI G C +GR+ +A+ L   +  KG      ++T  +D Y R+ ++E AL+  + 
Sbjct: 457 PTFNYLIMGLCNQGRLDDAQLLLEHMICKGYCVG-TSFTIYMDSYFRSGNVEGALKCWDD 515

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M   GV P  + +++ +  LC+   + +A +   EM  +   P+N+T N+LI+A+C++G 
Sbjct: 516 MVKVGVQPDFIAFSAYISGLCRLDHVNEAYQAFVEMTGRGFVPNNITYNSLISAFCRVGY 575

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
            + A+K++ +M ++GL+ D FT   LI GFCK   +D+  +    M ++G +P   +Y+ 
Sbjct: 576 VSEALKLEKKMRQSGLIPDVFTSNILIDGFCKEGRLDMMNKRFLDMYNSGLTPDVVTYNT 635

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG 508
           +++ YC   +  + +  +++ ++ G   D+  Y   +   C    ++ A ++ + +   G
Sbjct: 636 IINAYCGAQDMSSAMIFMNKMLADGCEPDIFTYNIWMHSLCNNHLLNRAVKMLDELVAMG 695

Query: 509 ILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLF 568
            + +SV Y +L            CSD+LD    R +++T K+ +    ++  +   +++F
Sbjct: 696 CMPNSVTYNTLM--------DGICSDVLD----RAMILTGKLIK---MAFQPNTVTVNVF 740

Query: 569 WSHVVDRGLMSKHIFKEMQLR 589
           +SH   +G   + +    +L+
Sbjct: 741 FSHFCKQGFGKRALVWAEKLK 761



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 128/458 (27%), Positives = 198/458 (43%), Gaps = 60/458 (13%)

Query: 126 PDGNSHVLSWL-------------VIFYANLK--MTQDGLQVFDQMRVHNLMPHLHACTV 170
           P  ++H+L+W              +  +A L   M  + L V   +R     P L A   
Sbjct: 121 PGASTHLLAWCSSDRSSGSYSALRLALHAFLAAGMASEALVVLAHIRCGGNTPSLSAIAA 180

Query: 171 LLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKD 230
           LL  L +       WKV+ +M   G   ++ ++N +I   C    V     LL  M   +
Sbjct: 181 LLRLLFRAGEVRPAWKVFVEMTARGPRPSLAIFNAMILGFCHRGLVHIGLGLLGVMWRFN 240

Query: 231 VRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREAR 290
           V  D  +YN LI  Y   G   +A  + D M   G  P +VTYN L++  C +G M +AR
Sbjct: 241 VIPDACSYNILIKGYSVFGQAGDAFQLLDEMRESGCQPTVVTYNILVNVLCHDGNMVDAR 300

Query: 291 RLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYN------ 342
           RLF ++   G   N +T+  L+DGY +A  ++EA      M A+G+ P   T+N      
Sbjct: 301 RLFDEMVKVGIEANTITFNVLVDGYAKAGRMDEAYAACREMKARGLVPDCCTFNILSAGA 360

Query: 343 ------------------------------SILRKLCKEGRIRDANRLLNEMNEKKIAPD 372
                                          ++ +LC +GR+ DA +L+    E+ +   
Sbjct: 361 YKFGKAVQLAHGQQELHEMFGSRISADSVDMVVCRLCWDGRLDDAWKLVCSAIEQGVPVS 420

Query: 373 NVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLF 432
               N L+ AY K G    A++V + M + GL+    T+  LI G C    +D A+ LL 
Sbjct: 421 VAGFNALVAAYSKEGFDEQALEVYSVMNKIGLVPSSPTFNYLIMGLCNQGRLDDAQLLLE 480

Query: 433 GMLDAGFSPSYC---SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFC 489
            M+  G    YC   S++  +D Y    N E  LK  D+ V  G+  D   + A I   C
Sbjct: 481 HMICKG----YCVGTSFTIYMDSYFRSGNVEGALKCWDDMVKVGVQPDFIAFSAYISGLC 536

Query: 490 KKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
           + + V+ A + F  M G G + +++ Y SL  A+ R G
Sbjct: 537 RLDHVNEAYQAFVEMTGRGFVPNNITYNSLISAFCRVG 574



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 105/439 (23%), Positives = 186/439 (42%), Gaps = 39/439 (8%)

Query: 126 PDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVW 185
           P  +  + + +++ + +  +   GL +   M   N++P   +  +L+   +        +
Sbjct: 206 PRPSLAIFNAMILGFCHRGLVHIGLGLLGVMWRFNVIPDACSYNILIKGYSVFGQAGDAF 265

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
           ++  +M + G    +  YN+L++  C   ++    +L  EM    + A+  T+N L+  Y
Sbjct: 266 QLLDEMRESGCQPTVVTYNILVNVLCHDGNMVDARRLFDEMVKVGIEANTITFNVLVDGY 325

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYN-------------SLIHG------------- 279
            K G   EA A    M+  G+ PD  T+N              L HG             
Sbjct: 326 AKAGRMDEAYAACREMKARGLVPDCCTFNILSAGAYKFGKAVQLAHGQQELHEMFGSRIS 385

Query: 280 ----------FCREGRMREARRLF-RDIKGATPNHVT-YTTLIDGYCRANDLEEALRLRE 327
                      C +GR+ +A +L    I+   P  V  +  L+  Y +    E+AL +  
Sbjct: 386 ADSVDMVVCRLCWDGRLDDAWKLVCSAIEQGVPVSVAGFNALVAAYSKEGFDEQALEVYS 445

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
           VM   G+ P   T+N ++  LC +GR+ DA  LL  M  K       +    +++Y + G
Sbjct: 446 VMNKIGLVPSSPTFNYLIMGLCNQGRLDDAQLLLEHMICKGYCV-GTSFTIYMDSYFRSG 504

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
           +   A+K  + M++ G+  D   + A I G C+   ++ A +    M   GF P+  +Y+
Sbjct: 505 NVEGALKCWDDMVKVGVQPDFIAFSAYISGLCRLDHVNEAYQAFVEMTGRGFVPNNITYN 564

Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGN 507
            L+  +C        LKL  +    GL  DV     LI  FCK+ ++D   + F  M  +
Sbjct: 565 SLISAFCRVGYVSEALKLEKKMRQSGLIPDVFTSNILIDGFCKEGRLDMMNKRFLDMYNS 624

Query: 508 GILGDSVIYTSLAYAYWRA 526
           G+  D V Y ++  AY  A
Sbjct: 625 GLTPDVVTYNTIINAYCGA 643



 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 54/228 (23%), Positives = 99/228 (43%), Gaps = 3/228 (1%)

Query: 320 EEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTL 379
            EAL +   +   G  P +    ++LR L + G +R A ++  EM  +   P     N +
Sbjct: 157 SEALVVLAHIRCGGNTPSLSAIAALLRLLFRAGEVRPAWKVFVEMTARGPRPSLAIFNAM 216

Query: 380 INAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGF 439
           I  +C  G     + +   M    ++ D  +Y  LI G+    +   A +LL  M ++G 
Sbjct: 217 ILGFCHRGLVHIGLGLLGVMWRFNVIPDACSYNILIKGYSVFGQAGDAFQLLDEMRESGC 276

Query: 440 SPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQR 499
            P+  +Y+ LV+  C+  N     +L DE V  G+  +   +  L+  + K  ++D A  
Sbjct: 277 QPTVVTYNILVNVLCHDGNMVDARRLFDEMVKVGIEANTITFNVLVDGYAKAGRMDEAYA 336

Query: 500 LFNLMQGNGILGDSVIYTSL---AYAYWRAGEPKACSDILDDMYRRRL 544
               M+  G++ D   +  L   AY + +A +       L +M+  R+
Sbjct: 337 ACREMKARGLVPDCCTFNILSAGAYKFGKAVQLAHGQQELHEMFGSRI 384


>gi|356523400|ref|XP_003530328.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Glycine max]
          Length = 664

 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 132/509 (25%), Positives = 235/509 (46%), Gaps = 28/509 (5%)

Query: 74  YKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVL 133
           +KH+  ++  MI  L +N    +   +L ++ +      P   ++ + + +         
Sbjct: 69  FKHTPLTYHVMIEKLGRNSELDALHYILHQMKIERI---PCSQDSFICVLNS-------- 117

Query: 134 SWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTD--MVWKVYKKM 191
                 Y N  +    L++F +++     P +     LL++L  +      M+  VY+ M
Sbjct: 118 ------YKNSGLGDRALKMFYRIKEFGCKPTVKIYNHLLDALLGESGNKFHMIGAVYENM 171

Query: 192 VQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMH 251
              G+  N+  YNVL+ A CK+  +D   KLL EM  +    D  +Y T++A  C+ G  
Sbjct: 172 RGEGMEPNVFTYNVLLKALCKNGKLDGACKLLVEMSKRGCVPDGVSYTTVVAAMCEDGRV 231

Query: 252 YEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTL 309
            EA  V  R   EG+   +   N+LI G CREGR+ E   L  ++   G  PN V+Y+++
Sbjct: 232 EEAREVARRFGAEGV---VSVCNALICGLCREGRVGEVFGLMDEMVGNGVDPNVVSYSSV 288

Query: 310 IDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI 369
           I       ++E AL +   M  +G  P V T++S+++     GR+ +   L   M  + +
Sbjct: 289 ISWLSDVGEVELALAVLGKMIRRGCRPNVHTFSSLMKGYFLGGRVGEGVGLWRVMVLEGV 348

Query: 370 APDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT-YKALIHGFCKAKEMDIAK 428
            P+ V  NTL+N  C  G+ A A+ V  RM +        T Y  L+HGF KA ++  A 
Sbjct: 349 RPNVVVYNTLLNGLCCSGNLAEAVDVCGRMEKDCFCRPNVTTYSTLVHGFVKAGDLQGAS 408

Query: 429 ELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRF 488
           E+   M++ G  P+   Y+ +VD  C  +  +   +L+D   + G    V  +   I+  
Sbjct: 409 EVWNKMVNCGVRPNVVVYTSMVDVLCKNSMFDQAYRLIDNMATDGCPPTVVTFNTFIKGL 468

Query: 489 CKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITL 548
           C   +V +A R+ + MQ  G L D+  Y  L    +   E K   +++ ++  R++ + L
Sbjct: 469 CCGGRVLWAMRVVDQMQRYGCLPDTRTYNELLDGLFSVNELKEACELIRELEERKVELNL 528

Query: 549 KIYRSFS---ASYAKDNEILDLFWSHVVD 574
             Y +     +S+ K+  +L +    +V+
Sbjct: 529 VTYNTVMYGFSSHGKEEWVLQVLGRMLVN 557



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 103/363 (28%), Positives = 173/363 (47%), Gaps = 6/363 (1%)

Query: 165 LHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLC 224
           +  C  L+  L ++     V+ +  +MV  GV  N+  Y+ +I       +V+    +L 
Sbjct: 247 VSVCNALICGLCREGRVGEVFGLMDEMVGNGVDPNVVSYSSVISWLSDVGEVELALAVLG 306

Query: 225 EMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREG 284
           +M  +  R ++ T+++L+  Y   G   E + +   M  EG+ P++V YN+L++G C  G
Sbjct: 307 KMIRRGCRPNVHTFSSLMKGYFLGGRVGEGVGLWRVMVLEGVRPNVVVYNTLLNGLCCSG 366

Query: 285 RMREA----RRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVT 340
            + EA     R+ +D     PN  TY+TL+ G+ +A DL+ A  +   M   GV P VV 
Sbjct: 367 NLAEAVDVCGRMEKDCF-CRPNVTTYSTLVHGFVKAGDLQGASEVWNKMVNCGVRPNVVV 425

Query: 341 YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML 400
           Y S++  LCK      A RL++ M      P  VT NT I   C  G    AM+V ++M 
Sbjct: 426 YTSMVDVLCKNSMFDQAYRLIDNMATDGCPPTVVTFNTFIKGLCCGGRVLWAMRVVDQMQ 485

Query: 401 EAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEE 460
             G + D  TY  L+ G     E+  A EL+  + +     +  +Y+ ++ G+ +   EE
Sbjct: 486 RYGCLPDTRTYNELLDGLFSVNELKEACELIRELEERKVELNLVTYNTVMYGFSSHGKEE 545

Query: 461 ALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYA-QRLFNLMQGNGILGDSVIYTSL 519
            +L++L   +  G+  D      +I  + K  KV  A Q L  +  G  +  D + +TSL
Sbjct: 546 WVLQVLGRMLVNGVKPDAITVNVVIYAYSKLGKVRTAIQFLDRITAGKELCPDIIAHTSL 605

Query: 520 AYA 522
            + 
Sbjct: 606 LWG 608



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 99/397 (24%), Positives = 190/397 (47%), Gaps = 41/397 (10%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           + D+M  + + P++ + + +++ L+     ++   V  KM++ G   N+H ++ L+    
Sbjct: 269 LMDEMVGNGVDPNVVSYSSVISWLSDVGEVELALAVLGKMIRRGCRPNVHTFSSLMKGYF 328

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS-PDI 270
               V +   L   M  + VR ++  YNTL+   C  G   EA+ V  RME++    P++
Sbjct: 329 LGGRVGEGVGLWRVMVLEGVRPNVVVYNTLLNGLCCSGNLAEAVDVCGRMEKDCFCRPNV 388

Query: 271 VTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREV 328
            TY++L+HGF + G ++ A  ++  +   G  PN V YT+++D  C+ +  ++A RL + 
Sbjct: 389 TTYSTLVHGFVKAGDLQGASEVWNKMVNCGVRPNVVVYTSMVDVLCKNSMFDQAYRLIDN 448

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRI---------------------------------- 354
           MA  G  P VVT+N+ ++ LC  GR+                                  
Sbjct: 449 MATDGCPPTVVTFNTFIKGLCCGGRVLWAMRVVDQMQRYGCLPDTRTYNELLDGLFSVNE 508

Query: 355 -RDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKA 413
            ++A  L+ E+ E+K+  + VT NT++  +   G     ++V  RML  G+  D  T   
Sbjct: 509 LKEACELIRELEERKVELNLVTYNTVMYGFSSHGKEEWVLQVLGRMLVNGVKPDAITVNV 568

Query: 414 LIHGFCKAKEMDIAKELLFGMLDAG--FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
           +I+ + K  ++  A + L   + AG    P   +++ L+ G CN    E  +  L++ ++
Sbjct: 569 VIYAYSKLGKVRTAIQFL-DRITAGKELCPDIIAHTSLLWGICNSLGIEEAIVYLNKMLN 627

Query: 472 RGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG 508
           +G+  +++ +  L+R F KK       R+ + + G G
Sbjct: 628 KGIFPNIATWDVLVRGFFKKLGHMGPIRILDDILGKG 664



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 102/421 (24%), Positives = 188/421 (44%), Gaps = 35/421 (8%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN------------ 199
           V++ MR   + P++    VLL +L K+   D   K+  +M + G V +            
Sbjct: 167 VYENMRGEGMEPNVFTYNVLLKALCKNGKLDGACKLLVEMSKRGCVPDGVSYTTVVAAMC 226

Query: 200 --------------------IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYN 239
                               + + N LI   C+   V +V  L+ EM    V  ++ +Y+
Sbjct: 227 EDGRVEEAREVARRFGAEGVVSVCNALICGLCREGRVGEVFGLMDEMVGNGVDPNVVSYS 286

Query: 240 TLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IK 297
           ++I+     G    ALAV  +M R G  P++ T++SL+ G+   GR+ E   L+R   ++
Sbjct: 287 SVISWLSDVGEVELALAVLGKMIRRGCRPNVHTFSSLMKGYFLGGRVGEGVGLWRVMVLE 346

Query: 298 GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGV-YPGVVTYNSILRKLCKEGRIRD 356
           G  PN V Y TL++G C + +L EA+ +   M       P V TY++++    K G ++ 
Sbjct: 347 GVRPNVVVYNTLLNGLCCSGNLAEAVDVCGRMEKDCFCRPNVTTYSTLVHGFVKAGDLQG 406

Query: 357 ANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIH 416
           A+ + N+M    + P+ V   ++++  CK      A ++ + M   G      T+   I 
Sbjct: 407 ASEVWNKMVNCGVRPNVVVYTSMVDVLCKNSMFDQAYRLIDNMATDGCPPTVVTFNTFIK 466

Query: 417 GFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCV 476
           G C    +  A  ++  M   G  P   +Y+ L+DG  + N  +   +L+ E   R + +
Sbjct: 467 GLCCGGRVLWAMRVVDQMQRYGCLPDTRTYNELLDGLFSVNELKEACELIRELEERKVEL 526

Query: 477 DVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDIL 536
           ++  Y  ++  F    K ++  ++   M  NG+  D++    + YAY + G+ +     L
Sbjct: 527 NLVTYNTVMYGFSSHGKEEWVLQVLGRMLVNGVKPDAITVNVVIYAYSKLGKVRTAIQFL 586

Query: 537 D 537
           D
Sbjct: 587 D 587



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 64/263 (24%), Positives = 116/263 (44%), Gaps = 9/263 (3%)

Query: 108 DFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHA 167
           D      V N +V     P  N  V + +V       M     ++ D M      P +  
Sbjct: 403 DLQGASEVWNKMVNCGVRP--NVVVYTSMVDVLCKNSMFDQAYRLIDNMATDGCPPTVVT 460

Query: 168 CTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEME 227
               +  L          +V  +M + G + +   YN L+      +++ +  +L+ E+E
Sbjct: 461 FNTFIKGLCCGGRVLWAMRVVDQMQRYGCLPDTRTYNELLDGLFSVNELKEACELIRELE 520

Query: 228 FKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMR 287
            + V  +L TYNT++  +   G     L V  RM   G+ PD +T N +I+ + + G++R
Sbjct: 521 ERKVELNLVTYNTVMYGFSSHGKEEWVLQVLGRMLVNGVKPDAITVNVVIYAYSKLGKVR 580

Query: 288 EARRLFRDI---KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSI 344
            A +    I   K   P+ + +T+L+ G C +  +EEA+     M  KG++P + T++ +
Sbjct: 581 TAIQFLDRITAGKELCPDIIAHTSLLWGICNSLGIEEAIVYLNKMLNKGIFPNIATWDVL 640

Query: 345 LR----KLCKEGRIRDANRLLNE 363
           +R    KL   G IR  + +L +
Sbjct: 641 VRGFFKKLGHMGPIRILDDILGK 663



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/271 (21%), Positives = 111/271 (40%), Gaps = 20/271 (7%)

Query: 66  WAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDD 125
           W +      + ++  + +M+ +L KN  F  A  +++ +A      T    N  +K    
Sbjct: 411 WNKMVNCGVRPNVVVYTSMVDVLCKNSMFDQAYRLIDNMATDGCPPTVVTFNTFIK---- 466

Query: 126 PDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVW 185
                 +     + +A        ++V DQM+ +  +P       LL+ L          
Sbjct: 467 -----GLCCGGRVLWA--------MRVVDQMQRYGCLPDTRTYNELLDGLFSVNELKEAC 513

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
           ++ +++ +  V  N+  YN +++        + V ++L  M    V+ D  T N +I  Y
Sbjct: 514 ELIRELEERKVELNLVTYNTVMYGFSSHGKEEWVLQVLGRMLVNGVKPDAITVNVVIYAY 573

Query: 246 CKKGMHYEALAVQDRMER-EGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPN 302
            K G    A+   DR+   + + PDI+ + SL+ G C    + EA      +  KG  PN
Sbjct: 574 SKLGKVRTAIQFLDRITAGKELCPDIIAHTSLLWGICNSLGIEEAIVYLNKMLNKGIFPN 633

Query: 303 HVTYTTLIDGYCRANDLEEALRLREVMAAKG 333
             T+  L+ G+ +       +R+ + +  KG
Sbjct: 634 IATWDVLVRGFFKKLGHMGPIRILDDILGKG 664


>gi|296089633|emb|CBI39452.3| unnamed protein product [Vitis vinifera]
          Length = 718

 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 138/562 (24%), Positives = 240/562 (42%), Gaps = 66/562 (11%)

Query: 9   SDTKFIKTISAIMLKGHWAKLLNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAE 68
           + TK  + ++ ++    W+  L  ++A    S +   VL  L      P+ +  FF+W E
Sbjct: 61  TKTKRSQAMARLINTEPWSHELQSSLAELAPSLSKTTVLQTL-QLIRTPAKALHFFRWVE 119

Query: 69  SAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDG 128
           +    + H+ QS++ MI IL ++++  +A+N +  I  +            VK+ D    
Sbjct: 120 AK--GFTHNEQSYFLMIEILGRSRNLNAARNFVFSIEKKS--------GGAVKLGD---- 165

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
                + L+  Y    + Q+ +                                   KV+
Sbjct: 166 --RFFNSLIRSYGWAGLFQESI-----------------------------------KVF 188

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEM-EFKDVRADLFTYNTLIALYCK 247
           K M ++GV  ++  +N L+    K       ++L  EM +   V  D +T+N LI  +C 
Sbjct: 189 KTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFNILIRGFCM 248

Query: 248 KGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI----KGATPNH 303
             M  E       M R    PD+VTYN+L+ G CR G+++ A  + + +       +PN 
Sbjct: 249 NSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNV 308

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
           VTYTTLI GYC   D+ EAL L   M ++G+ P  +TYN++++ LC+  ++     +L  
Sbjct: 309 VTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEG 368

Query: 364 M-NEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAK 422
           M  +    PD  T NTLI A+C +G    A  V  +M E  +  D  TY  L+   C+  
Sbjct: 369 MVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRG 428

Query: 423 EMDIAKELLFGML-------DAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLC 475
           +   A+E    +        D G  P   +Y+ + +  C+    +   ++  + + RG  
Sbjct: 429 DFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRG-T 487

Query: 476 VDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDI 535
            D   Y+ LI   C++   +    L  LM     + D+  Y  +     + G+P      
Sbjct: 488 QDPPSYKTLILGHCREGTPEAGFDLLVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKS 547

Query: 536 LDDMYRRRLMITLKIYRSFSAS 557
           L+ M +   + T  I+ S  A+
Sbjct: 548 LEKMLKSSHLPTTAIFHSILAA 569



 Score = 95.1 bits (235), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 86/374 (22%), Positives = 164/374 (43%), Gaps = 13/374 (3%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           +V+  +VK   +   N    + L+  Y   +   + L +  +M    L P+      L+ 
Sbjct: 292 NVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQ 351

Query: 174 SLAKDRLTDMVWKVYKKMV-QLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVR 232
            L + +  D + ++ + MV   G + +    N LI A C    +++   +  +M    V+
Sbjct: 352 GLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQ 411

Query: 233 ADLFTYNTLIALYCKKGMHYEALAVQDRM-ERE------GISPDIVTYNSLIHGFCREGR 285
            D  TY+ L+   C++G    A    D + E+E      G  P +  YN +    C  G+
Sbjct: 412 PDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGK 471

Query: 286 MREARRLFRDI-KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSI 344
            ++A R+FR + K  T +  +Y TLI G+CR    E    L  +M  +   P   TY  +
Sbjct: 472 TKKAERVFRQLMKRGTQDPPSYKTLILGHCREGTPEAGFDLLVLMLRRDFVPDAETYGLM 531

Query: 345 LRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG---DTASAMKVK-NRML 400
           +  L K+G    A++ L +M +    P     ++++ A  + G   ++AS +K+   R +
Sbjct: 532 IDGLLKKGDPVLAHKSLEKMLKSSHLPTTAIFHSILAALVEKGCAHESASLVKLMLERRI 591

Query: 401 EAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEE 460
              + L   T + L+   C+++++  A+++L   L+   S      S ++ G C  +   
Sbjct: 592 RQNIDLSTHTMEELVSFLCQSRKLLEAQKMLLFSLEKRQSVDIDMCSTVISGLCKAHKVS 651

Query: 461 ALLKLLDEFVSRGL 474
               L  E V +G+
Sbjct: 652 EAFALYYELVEKGM 665



 Score = 41.6 bits (96), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 41/182 (22%), Positives = 80/182 (43%), Gaps = 6/182 (3%)

Query: 191 MVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGM 250
           M++   V +   Y ++I    K  D     K L +M           +++++A   +KG 
Sbjct: 516 MLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPTTAIFHSILAALVEKGC 575

Query: 251 HYEALAVQ----DRMEREGISPDIVTYNSLIHGFCREGRMREARR--LFRDIKGATPNHV 304
            +E+ ++     +R  R+ I     T   L+   C+  ++ EA++  LF   K  + +  
Sbjct: 576 AHESASLVKLMLERRIRQNIDLSTHTMEELVSFLCQSRKLLEAQKMLLFSLEKRQSVDID 635

Query: 305 TYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM 364
             +T+I G C+A+ + EA  L   +  KG+   +     +   L  EGR+ +A  +  +M
Sbjct: 636 MCSTVISGLCKAHKVSEAFALYYELVEKGMQHRLTCQEDLRISLEAEGRLNEAKFVSKKM 695

Query: 365 NE 366
            E
Sbjct: 696 PE 697


>gi|225433712|ref|XP_002266503.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
           chloroplastic-like [Vitis vinifera]
          Length = 746

 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 138/562 (24%), Positives = 240/562 (42%), Gaps = 66/562 (11%)

Query: 9   SDTKFIKTISAIMLKGHWAKLLNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAE 68
           + TK  + ++ ++    W+  L  ++A    S +   VL  L      P+ +  FF+W E
Sbjct: 61  TKTKRSQAMARLINTEPWSHELQSSLAELAPSLSKTTVLQTL-QLIRTPAKALHFFRWVE 119

Query: 69  SAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDG 128
           +    + H+ QS++ MI IL ++++  +A+N +  I  +            VK+ D    
Sbjct: 120 AK--GFTHNEQSYFLMIEILGRSRNLNAARNFVFSIEKKS--------GGAVKLGD---- 165

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
                + L+  Y    + Q+ +                                   KV+
Sbjct: 166 --RFFNSLIRSYGWAGLFQESI-----------------------------------KVF 188

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEM-EFKDVRADLFTYNTLIALYCK 247
           K M ++GV  ++  +N L+    K       ++L  EM +   V  D +T+N LI  +C 
Sbjct: 189 KTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFNILIRGFCM 248

Query: 248 KGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI----KGATPNH 303
             M  E       M R    PD+VTYN+L+ G CR G+++ A  + + +       +PN 
Sbjct: 249 NSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNV 308

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
           VTYTTLI GYC   D+ EAL L   M ++G+ P  +TYN++++ LC+  ++     +L  
Sbjct: 309 VTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEG 368

Query: 364 M-NEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAK 422
           M  +    PD  T NTLI A+C +G    A  V  +M E  +  D  TY  L+   C+  
Sbjct: 369 MVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRG 428

Query: 423 EMDIAKELLFGML-------DAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLC 475
           +   A+E    +        D G  P   +Y+ + +  C+    +   ++  + + RG  
Sbjct: 429 DFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRG-T 487

Query: 476 VDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDI 535
            D   Y+ LI   C++   +    L  LM     + D+  Y  +     + G+P      
Sbjct: 488 QDPPSYKTLILGHCREGTPEAGFDLLVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKS 547

Query: 536 LDDMYRRRLMITLKIYRSFSAS 557
           L+ M +   + T  I+ S  A+
Sbjct: 548 LEKMLKSSHLPTTAIFHSILAA 569



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 86/402 (21%), Positives = 165/402 (41%), Gaps = 41/402 (10%)

Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
           +V+  +VK   +   N    + L+  Y   +   + L +  +M    L P+      L+ 
Sbjct: 292 NVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQ 351

Query: 174 SLAKDRLTDMVWKVYKKMV-QLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVR 232
            L + +  D + ++ + MV   G + +    N LI A C    +++   +  +M    V+
Sbjct: 352 GLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQ 411

Query: 233 ADLFTYNTLIALYCKKGMHYEALAVQDRM-ERE------GISPDIVTYNSLIHGFCREGR 285
            D  TY+ L+   C++G    A    D + E+E      G  P +  YN +    C  G+
Sbjct: 412 PDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGK 471

Query: 286 MREARRLFRDI-KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSI 344
            ++A R+FR + K  T +  +Y TLI G+CR    E    L  +M  +   P   TY  +
Sbjct: 472 TKKAERVFRQLMKRGTQDPPSYKTLILGHCREGTPEAGFDLLVLMLRRDFVPDAETYGLM 531

Query: 345 LRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG---DTASAMKV------ 395
           +  L K+G    A++ L +M +    P     ++++ A  + G   ++AS +K+      
Sbjct: 532 IDGLLKKGDPVLAHKSLEKMLKSSHLPTTAIFHSILAALVEKGCAHESASLVKLMLERRI 591

Query: 396 ---------------KNRMLEAGLMLDQFTYK--------ALIHGFCKAKEMDIAKELLF 432
                          K+ + +   M     Y+         L+   C+++++  A+++L 
Sbjct: 592 RQNIDLSTHTVRLLYKSGLQDKAFMTIGLLYENGYLVKMEELVSFLCQSRKLLEAQKMLL 651

Query: 433 GMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGL 474
             L+   S      S ++ G C  +       L  E V +G+
Sbjct: 652 FSLEKRQSVDIDMCSTVISGLCKAHKVSEAFALYYELVEKGM 693


>gi|356561401|ref|XP_003548970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 447

 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 112/403 (27%), Positives = 194/403 (48%), Gaps = 2/403 (0%)

Query: 145 MTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYN 204
           +  D +  F+++ +    P +     +L  L K +       + ++M   G+  N+   N
Sbjct: 45  VVDDTVSQFNRLLLVRHTPPIIEFGKILGYLVKMKHYPTAISLSRQMEVKGIEPNLVTLN 104

Query: 205 VLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMERE 264
           +LI+  C    +     +L ++     + D  T NTL+   C KG    +L   D++  +
Sbjct: 105 ILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLHFHDKVVAQ 164

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEA 322
           G   + V+Y +L++G C+ G  R A +L R I  +   P+ V Y+T+IDG C+   + +A
Sbjct: 165 GFQMNQVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLCKDKIVNQA 224

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
                 M A+G++P V+TY++++   C  G++  A  LLNEM  K I P+  T N LI+A
Sbjct: 225 YDFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNINPNVYTYNILIDA 284

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
            CK G    A K+   M   G   D  TY +++ G CK++ +D A  L   M   G  P+
Sbjct: 285 LCKEGKVKEAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNLDKATALFMKMKKWGIQPN 344

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y+ L+DG C     +   KL    + +G C+DV  Y  +I   CK+   D A  + +
Sbjct: 345 KYTYTALIDGLCKGGRLKNAQKLFQHLLVKGCCIDVRTYNVMISGLCKEGMFDKALAMKS 404

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
            M+ NG + ++V +  +  + +   E      +L  M  + L+
Sbjct: 405 KMEDNGCIPNAVTFDIIIRSLFEKDENDKAEKLLHGMIAKGLL 447



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 93/321 (28%), Positives = 154/321 (47%), Gaps = 3/321 (0%)

Query: 245 YCKKGMHYE-ALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATP 301
           Y  K  HY  A+++  +ME +GI P++VT N LI+ FC  G+M  +  +   I   G  P
Sbjct: 74  YLVKMKHYPTAISLSRQMEVKGIEPNLVTLNILINCFCHLGQMAFSFSVLGKILKLGYQP 133

Query: 302 NHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLL 361
           + +T  TL+ G C   +++ +L   + + A+G     V+Y ++L  LCK G  R A +LL
Sbjct: 134 DTITLNTLMKGLCLKGEVKRSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAVKLL 193

Query: 362 NEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKA 421
             + ++   PD V  +T+I+  CK      A    + M   G+  +  TY  LI GFC A
Sbjct: 194 RMIEDRSTRPDVVMYSTIIDGLCKDKIVNQAYDFFSEMNARGIFPNVITYSTLIWGFCLA 253

Query: 422 KEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVY 481
            ++  A  LL  M+    +P+  +Y+ L+D  C +   +   KLL E   +G   DV  Y
Sbjct: 254 GQLMGAFSLLNEMILKNINPNVYTYNILIDALCKEGKVKEAKKLLAEMHHKGQPADVVTY 313

Query: 482 RALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
            +++   CK + +D A  LF  M+  GI  +   YT+L     + G  K    +   +  
Sbjct: 314 NSVLDGLCKSQNLDKATALFMKMKKWGIQPNKYTYTALIDGLCKGGRLKNAQKLFQHLLV 373

Query: 542 RRLMITLKIYRSFSASYAKDN 562
           +   I ++ Y    +   K+ 
Sbjct: 374 KGCCIDVRTYNVMISGLCKEG 394



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/249 (19%), Positives = 96/249 (38%), Gaps = 35/249 (14%)

Query: 351 EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
           E  + D     N +   +  P  +    ++    K+    +A+ +  +M   G+  +  T
Sbjct: 43  ENVVDDTVSQFNRLLLVRHTPPIIEFGKILGYLVKMKHYPTAISLSRQMEVKGIEPNLVT 102

Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFV 470
              LI+ FC   +M  +  +L  +L  G+ P   + + L+ G C K   +  L   D+ V
Sbjct: 103 LNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLHFHDKVV 162

Query: 471 SR--------------GLC---------------------VDVSVYRALIRRFCKKEKVD 495
           ++              GLC                      DV +Y  +I   CK + V+
Sbjct: 163 AQGFQMNQVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLCKDKIVN 222

Query: 496 YAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFS 555
            A   F+ M   GI  + + Y++L + +  AG+      +L++M  + +   +  Y    
Sbjct: 223 QAYDFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNINPNVYTYNILI 282

Query: 556 ASYAKDNEI 564
            +  K+ ++
Sbjct: 283 DALCKEGKV 291


>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
 gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
          Length = 669

 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 119/432 (27%), Positives = 195/432 (45%), Gaps = 46/432 (10%)

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
           P ++ CT L+ +L +   T    +V +     G   ++  YN L+   C+   +D   +L
Sbjct: 74  PDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRL 133

Query: 223 LCEMEFKDVRADLFTYNTLIALYCKKGM-------------------------------- 250
           +  M    V  D +TY  LI + C +G                                 
Sbjct: 134 IGSMP---VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCR 190

Query: 251 ---HYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVT 305
                +A+AV D M  +G +P+IVTYN +I+G CREGR+ +AR L   +   G  P+ V+
Sbjct: 191 NSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVS 250

Query: 306 YTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMN 365
           YTTL+ G C +   ++   L   M  K   P  VT++ ++R  C+ G +  A ++L +M 
Sbjct: 251 YTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMT 310

Query: 366 EKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMD 425
           E   A +   CN +IN+ CK G    A K+ N M   G   D  +Y  ++ G C+A+  D
Sbjct: 311 EHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWD 370

Query: 426 IAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
            AKELL  M+     P+  +++  +   C K   E  + L+++    G  V V  Y AL+
Sbjct: 371 DAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALV 430

Query: 486 RRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL- 544
             FC +  +D A  LF  M       +++ YT+L      A      ++++ +M R    
Sbjct: 431 NGFCVQGHIDSALELFRSMPCK---PNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCP 487

Query: 545 --MITLKIYRSF 554
             ++T  +  SF
Sbjct: 488 PNVVTFNVLVSF 499



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 125/499 (25%), Positives = 228/499 (45%), Gaps = 46/499 (9%)

Query: 129 NSHVLSWLVIFYANLKMT--QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWK 186
             +V+++ V+  A  + +  +  + V D+MR     P++    V++N + ++   D   +
Sbjct: 175 QPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARE 234

Query: 187 VYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYC 246
           +  ++   G   +   Y  L+   C S   D VE+L  EM  K+   +  T++ LI  +C
Sbjct: 235 LLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFC 294

Query: 247 KKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHV 304
           + GM   A+ V ++M   G + +    N +I+  C++GR+ +A +L  D+   G  P+ +
Sbjct: 295 RGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTI 354

Query: 305 TYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM 364
           +YTT++ G CRA   ++A  L   M      P  VT+N+ +  LC++G I  A  L+ +M
Sbjct: 355 SYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQM 414

Query: 365 NEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEM 424
           +E       VT N L+N +C  G   SA+++   M       +  TY  L+ G C A+ +
Sbjct: 415 SEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSM---PCKPNTITYTTLLTGLCNAERL 471

Query: 425 DIAKELLFGML-----------------------------------DAGFSPSYCSYSWL 449
           D A EL+  ML                                   + G +P+  +Y+ L
Sbjct: 472 DGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTL 531

Query: 450 VDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGI 509
           +DG     + E  L+LL   VS+G+  DV  + ++I    K+++++ A +LF+++Q  G+
Sbjct: 532 LDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGM 591

Query: 510 LGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDN---EILD 566
              +V+Y  +     +  E     D    M     M     Y       A +    E  D
Sbjct: 592 RPKAVVYNKILLGLCKRCEIDNAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEAQD 651

Query: 567 LFWSHVVDRGLMSKHIFKE 585
           L  S +  RG+++K++ +E
Sbjct: 652 LL-SVLCSRGVLNKNLTEE 669



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 109/401 (27%), Positives = 187/401 (46%), Gaps = 8/401 (1%)

Query: 175 LAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRAD 234
           +A++ L   V  V +     G   +++L   LI   C+        ++L   E      D
Sbjct: 51  IAREDLAGAVRLVERSGSCDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVD 110

Query: 235 LFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR 294
           +F YNTL+A YC+ G H +  A +  +    ++PD  TY  LI   C  GR+ +A  L  
Sbjct: 111 VFAYNTLVAGYCRYG-HLD--AARRLIGSMPVAPDAYTYTPLIRVLCDRGRVADALSLLD 167

Query: 295 DI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEG 352
           D+  +G  PN VTYT L++  CR +  E+A+ + + M AKG  P +VTYN I+  +C+EG
Sbjct: 168 DMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREG 227

Query: 353 RIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYK 412
           R+ DA  LLN +      PD V+  TL+   C         ++   M+E   M ++ T+ 
Sbjct: 228 RVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFD 287

Query: 413 ALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSR 472
            LI  FC+   ++ A ++L  M + G + +    + +++  C +   +   KLL++  S 
Sbjct: 288 MLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSY 347

Query: 473 GLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKAC 532
           G   D   Y  +++  C+ E+ D A+ L N M  N    + V + +      + G  +  
Sbjct: 348 GCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQA 407

Query: 533 SDILDDMYRRRLMITLKIYRSFSASYAKDNEI---LDLFWS 570
             +++ M      + +  Y +    +     I   L+LF S
Sbjct: 408 IMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRS 448



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 123/463 (26%), Positives = 207/463 (44%), Gaps = 50/463 (10%)

Query: 163 PHLHACTVLLNSLA-KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEK 221
           P  +  T L+  L  + R+ D    +   M++ G   N+  Y VL+ A C++S  ++   
Sbjct: 141 PDAYTYTPLIRVLCDRGRVAD-ALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMA 199

Query: 222 LLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFC 281
           +L EM  K    ++ TYN +I   C++G   +A  + +R+   G  PD V+Y +L+ G C
Sbjct: 200 VLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLC 259

Query: 282 REGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREV----------- 328
              R  +   LF ++  K   PN VT+  LI  +CR   +E A+++ E            
Sbjct: 260 ASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTT 319

Query: 329 ------------------------MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM 364
                                   M + G  P  ++Y ++L+ LC+  R  DA  LLNEM
Sbjct: 320 LCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEM 379

Query: 365 NEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEM 424
                 P+ VT NT I   C+ G    A+ +  +M E G  +   TY AL++GFC    +
Sbjct: 380 VRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHI 439

Query: 425 DIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLC-VDVSVYRA 483
           D A EL   M      P+  +Y+ L+ G CN    +   +L+ E + RG C  +V  +  
Sbjct: 440 DSALELFRSM---PCKPNTITYTTLLTGLCNAERLDGAAELVAEML-RGDCPPNVVTFNV 495

Query: 484 LIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRR 543
           L+  FC+K  ++ A  L   M  +G   + + Y +L     +    +   ++L  +  + 
Sbjct: 496 LVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKG 555

Query: 544 LMITLKIYRSFSASYAKDN---EILDLFWSHVV-DRGLMSKHI 582
           +   +  + S     +K++   E + LF  HVV D G+  K +
Sbjct: 556 VSPDVITFSSIIGILSKEDRIEEAVQLF--HVVQDIGMRPKAV 596



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 70/298 (23%), Positives = 134/298 (44%), Gaps = 7/298 (2%)

Query: 115 VLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNS 174
           +LN +V+ +  P  N    +  +       + +  + + +QM  H     +     L+N 
Sbjct: 375 LLNEMVRNNCPP--NEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNG 432

Query: 175 LAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRAD 234
                  D   ++++ M       N   Y  L+   C +  +D   +L+ EM   D   +
Sbjct: 433 FCVQGHIDSALELFRSM---PCKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPN 489

Query: 235 LFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR 294
           + T+N L++ +C+KG   EA+ + ++M   G +P+++TYN+L+ G  ++    +A  L  
Sbjct: 490 VVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLH 549

Query: 295 DI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEG 352
            +  KG +P+ +T++++I    + + +EEA++L  V+   G+ P  V YN IL  LCK  
Sbjct: 550 GLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGLCKRC 609

Query: 353 RIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
            I +A      M      P+  T   LI      G    A  + + +   G++    T
Sbjct: 610 EIDNAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEAQDLLSVLCSRGVLNKNLT 667



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 54/208 (25%), Positives = 87/208 (41%), Gaps = 33/208 (15%)

Query: 345 LRKLCKEGRIRDANRLLNEMNE-KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAG 403
           LR+L     +  A RL+         APD   C  LI   C+ G T+ A +V      +G
Sbjct: 47  LRRLIAREDLAGAVRLVERSGSCDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSG 106

Query: 404 LMLDQFTYKALIHGFCKAKEMDIAK--------------------------------ELL 431
             +D F Y  L+ G+C+   +D A+                                 LL
Sbjct: 107 SPVDVFAYNTLVAGYCRYGHLDAARRLIGSMPVAPDAYTYTPLIRVLCDRGRVADALSLL 166

Query: 432 FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
             ML  G  P+  +Y+ L++  C  +  E  + +LDE  ++G   ++  Y  +I   C++
Sbjct: 167 DDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCRE 226

Query: 492 EKVDYAQRLFNLMQGNGILGDSVIYTSL 519
            +VD A+ L N +   G   D+V YT+L
Sbjct: 227 GRVDDARELLNRLPSYGFQPDTVSYTTL 254


>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 822

 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 127/506 (25%), Positives = 227/506 (44%), Gaps = 21/506 (4%)

Query: 80  SHWTMIHILTKNKHFKSAQN----MLEKIALRDFLSTPSVLNALVK-------------- 121
           S+ T+IH   +      A N    M+++  + D ++  S ++AL K              
Sbjct: 229 SYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQM 288

Query: 122 IHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLT 181
           I +  + +    + ++  Y+ L   ++   +F +M    LMP +  C   ++SL K   +
Sbjct: 289 ISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKS 348

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
               + +  M   G   ++  Y+VL+H       V  +  L   ME   + AD   YN L
Sbjct: 349 KEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNIL 408

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGA 299
           I  Y K+GM  EA+ +  +M+  G+ PD  TY ++I  F R GR+ +A   F  +   G 
Sbjct: 409 IDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGL 468

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGV-YPGVVTYNSILRKLCKEGRIRDAN 358
            P+ + Y +LI G+C   +L +A  L   M ++G+  P  V +NSI+  LCKEGR+ +A 
Sbjct: 469 KPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQ 528

Query: 359 RLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGF 418
            + + +      PD +T N+LI+ Y  +G    A  V + M+  G+  D  TY AL+ G+
Sbjct: 529 DIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGY 588

Query: 419 CKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDV 478
           C+   +D    L   ML  G  P+  +Y  ++ G  N        K+  E +  G  +D+
Sbjct: 589 CRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDI 648

Query: 479 SVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDD 538
           S    ++   C+    D A  LF  +    +  +  I  ++  A ++  + +  +++ D 
Sbjct: 649 STCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEANELFDS 708

Query: 539 MYRRRLMITLKIYRSFSASYAKDNEI 564
           +    L+     Y     +  K+  +
Sbjct: 709 ISATGLVPNASTYGVMITNLLKEGSV 734



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 126/447 (28%), Positives = 208/447 (46%), Gaps = 8/447 (1%)

Query: 144 KMTQDGLQVF-DQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQL--GVVANI 200
           K + D + V   +M    + P   + + +L SL +D  +     +   MV+   G   N+
Sbjct: 168 KRSDDAVNVLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNV 227

Query: 201 HLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDR 260
             YN +IH   +  +V K   L  EM  + V  D+ TY++ I   CK     +A  V  +
Sbjct: 228 VSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQ 287

Query: 261 MEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRAND 318
           M   G  PD VTYN +IHG+   G+ +E   +FR++  +G  P+  T  + +   C+   
Sbjct: 288 MISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGK 347

Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT 378
            +EA    + MAAKG  P +VTY+ +L     EG + D   L N M    I  D+   N 
Sbjct: 348 SKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNI 407

Query: 379 LINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAG 438
           LI+AY K G    AM +  +M E G+M D +TY  +I  F +   +  A +    M+  G
Sbjct: 408 LIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMG 467

Query: 439 FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVY-RALIRRFCKKEKVDYA 497
             P    Y+ L+ G+C   N     +L+ E +SRG+    +V+  ++I   CK+ +V  A
Sbjct: 468 LKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEA 527

Query: 498 QRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSAS 557
           Q +F+L+   G   D + + SL   Y   G+ +    +LD M    +   +  Y +    
Sbjct: 528 QDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDG 587

Query: 558 YAKDNEILD--LFWSHVVDRGLMSKHI 582
           Y ++  I D  + +  ++ +G+    I
Sbjct: 588 YCRNGRIDDGLILFREMLSKGVKPTTI 614



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 112/423 (26%), Positives = 194/423 (45%), Gaps = 42/423 (9%)

Query: 146 TQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNV 205
           +++  + FD M      P L   +VLL+  A +     +  ++  M   G+VA+  +YN+
Sbjct: 348 SKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNI 407

Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
           LI A  K   +D+   +  +M+ + V  D +TY T+IA + + G   +A+   ++M   G
Sbjct: 408 LIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMG 467

Query: 266 ISPDIVTYNSLIHGFC------------------------------------REGRMREA 289
           + PD + YNSLI GFC                                    +EGR+ EA
Sbjct: 468 LKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEA 527

Query: 290 RRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRK 347
           + +F  +   G  P+ +T+ +LIDGY     +E+A  + + M + G+ P VVTY+++L  
Sbjct: 528 QDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDG 587

Query: 348 LCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLD 407
            C+ GRI D   L  EM  K + P  +T   +++     G T  A K+ + M+E+G  +D
Sbjct: 588 YCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMD 647

Query: 408 QFTYKALIHGFCKAKEMDIAKELL--FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKL 465
             T   ++ G C+    D A  L    G ++  F+ +    + ++D        E   +L
Sbjct: 648 ISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAI--INTMIDAMYKVRKREEANEL 705

Query: 466 LDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWR 525
            D   + GL  + S Y  +I    K+  V+ A  +F+LM+ +G    S +  ++      
Sbjct: 706 FDSISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNNIIRVLLE 765

Query: 526 AGE 528
            GE
Sbjct: 766 KGE 768



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 104/382 (27%), Positives = 168/382 (43%), Gaps = 7/382 (1%)

Query: 203 YNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQ-DRM 261
           YN+L+  CC++        L        ++ D+   N L+   C      +A+ V   RM
Sbjct: 122 YNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKCLCHAKRSDDAVNVLLHRM 181

Query: 262 EREGISPDIVTYNSLIHGFCREGRMREARRLFRDI----KGATPNHVTYTTLIDGYCRAN 317
              G+ PD ++Y++++   C + R + A  L   +     G +PN V+Y T+I G+ R  
Sbjct: 182 PELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIHGFFREG 241

Query: 318 DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCN 377
           ++ +A  L   M  +GV P VVTY+S +  LCK   +  A  +L +M      PD VT N
Sbjct: 242 EVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPDKVTYN 301

Query: 378 TLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA 437
            +I+ Y  +G       +   M   GLM D FT  + +   CK  +   A E    M   
Sbjct: 302 CMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAK 361

Query: 438 GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYA 497
           G  P   +YS L+ GY  +     +L L +     G+  D SVY  LI  + K+  +D A
Sbjct: 362 GHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEA 421

Query: 498 QRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSAS 557
             +F  MQ  G++ D+  Y ++  A+ R G      D  + M    L     +Y S    
Sbjct: 422 MLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQG 481

Query: 558 YAKDNEILDL--FWSHVVDRGL 577
           +     ++      S ++ RG+
Sbjct: 482 FCMHGNLVKAKELISEMMSRGI 503



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 87/350 (24%), Positives = 154/350 (44%), Gaps = 40/350 (11%)

Query: 132 VLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAK-DRLTDMVWKVYKK 190
           V + L+  Y    M  + + +F QM+   +MP       ++ + ++  RL D + K + +
Sbjct: 404 VYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDK-FNQ 462

Query: 191 MVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEM------------------------ 226
           M+ +G+  +  +YN LI   C   ++ K ++L+ EM                        
Sbjct: 463 MIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEG 522

Query: 227 ---EFKDV---------RADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYN 274
              E +D+         R D+ T+N+LI  Y   G   +A  V D M   GI PD+VTY+
Sbjct: 523 RVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYS 582

Query: 275 SLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAK 332
           +L+ G+CR GR+ +   LFR++  KG  P  +TY  ++ G         A ++   M   
Sbjct: 583 ALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIES 642

Query: 333 GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
           G    + T   IL  LC+     +A  L  ++    +  +    NT+I+A  K+     A
Sbjct: 643 GTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEA 702

Query: 393 MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
            ++ + +   GL+ +  TY  +I    K   ++ A  +   M  +G +PS
Sbjct: 703 NELFDSISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSGCAPS 752



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 90/356 (25%), Positives = 158/356 (44%), Gaps = 53/356 (14%)

Query: 263 REGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRAND---- 318
           R+G S  +  +N +    CRE    EAR      + A P   TY  L+D  CRA+     
Sbjct: 92  RDGPSLAVALFNRI----CRE----EARP-----RVALPTVCTYNILMDCCCRAHRPTVG 138

Query: 319 -------LEEALRLREVMA---------AK----------------GVYPGVVTYNSILR 346
                  L+  L+   ++A         AK                GV P  ++Y+++L+
Sbjct: 139 FALFGRFLKTGLKTDVIVANILLKCLCHAKRSDDAVNVLLHRMPELGVEPDTISYSTVLK 198

Query: 347 KLCKEGRIRDANRLLNEMNEKK--IAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGL 404
            LC++ R + A  LL+ M +K    +P+ V+ NT+I+ + + G+ + A  + + M++ G+
Sbjct: 199 SLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGV 258

Query: 405 MLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLK 464
           + D  TY + I   CKA+ MD A+ +L  M+  GF P   +Y+ ++ GY      +    
Sbjct: 259 VPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAG 318

Query: 465 LLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYW 524
           +  E   RGL  D+    + +   CK  K   A   F+ M   G   D V Y+ L + Y 
Sbjct: 319 MFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYA 378

Query: 525 RAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD--LFWSHVVDRGLM 578
             G      ++ + M    ++    +Y     +Y K   + +  L ++ + +RG+M
Sbjct: 379 AEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVM 434



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 65/289 (22%), Positives = 120/289 (41%), Gaps = 46/289 (15%)

Query: 171 LLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKD 230
           ++NSL K+        ++  ++ +G   ++  +N LI        ++K   +L  M    
Sbjct: 514 IINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVG 573

Query: 231 VRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREAR 290
           +  D+ TY+ L+  YC+ G   + L +   M  +G+ P  +TY  ++HG   +GR   A+
Sbjct: 574 IEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAK 633

Query: 291 RLFRDI--KGATPNHVTYTTLIDGYCRAN------------------------------- 317
           ++  ++   G T +  T   ++ G CR N                               
Sbjct: 634 KMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAM 693

Query: 318 ----DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDN 373
                 EEA  L + ++A G+ P   TY  ++  L KEG + +A+ + + M +   AP +
Sbjct: 694 YKVRKREEANELFDSISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSGCAPSS 753

Query: 374 VTCNTLINAYCKIGDTASA----MKVKNRMLE-----AGLMLDQFTYKA 413
              N +I    + G+ + A     KV  + +      A LML  F+ K 
Sbjct: 754 RLLNNIIRVLLEKGEISKAGNYLSKVDGKTISLEASTASLMLSLFSRKG 802



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 59/277 (21%), Positives = 121/277 (43%), Gaps = 8/277 (2%)

Query: 115 VLNALVKIHDDPDGNSHVLSW--LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLL 172
           + + ++ I + PD    V+++  L+  Y  +   +    V D M    + P +   + LL
Sbjct: 530 IFDLVIHIGERPD----VITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALL 585

Query: 173 NSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVR 232
           +   ++   D    ++++M+  GV      Y +++H           +K+  EM      
Sbjct: 586 DGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTT 645

Query: 233 ADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRL 292
            D+ T   ++   C+     EA+A+  ++    +  +I   N++I    +  +  EA  L
Sbjct: 646 MDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEANEL 705

Query: 293 FRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
           F  I   G  PN  TY  +I    +   +EEA  +  +M   G  P     N+I+R L +
Sbjct: 706 FDSISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNNIIRVLLE 765

Query: 351 EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
           +G I  A   L++++ K I+ +  T + +++ + + G
Sbjct: 766 KGEISKAGNYLSKVDGKTISLEASTASLMLSLFSRKG 802


>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 111/418 (26%), Positives = 193/418 (46%), Gaps = 4/418 (0%)

Query: 128 GNSHVLSWLVIFYANLKMTQ--DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVW 185
           G   V ++  +     KM +  D  +V D+MR  +  P      +++ SL      D+  
Sbjct: 150 GQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL 209

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
           KV  +++       +  Y +LI A      VD+  KLL EM  + ++ D+FTYNT+I   
Sbjct: 210 KVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGM 269

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNH 303
           CK+GM   A  +   +E +G  PD+++YN L+     +G+  E  +L   +  +   PN 
Sbjct: 270 CKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNV 329

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
           VTY+ LI   CR   +EEA+ L ++M  KG+ P   +Y+ ++   C+EGR+  A   L  
Sbjct: 330 VTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLET 389

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
           M      PD V  NT++   CK G    A+++  ++ E G   +  +Y  +      + +
Sbjct: 390 MISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGD 449

Query: 424 MDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRA 483
              A  ++  M+  G  P   +Y+ ++   C +   +   +LL +  S      V  Y  
Sbjct: 450 KIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNI 509

Query: 484 LIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
           ++  FCK  +++ A  + + M GNG   +   YT L      AG      ++ +D+ R
Sbjct: 510 VLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVR 567



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 108/394 (27%), Positives = 178/394 (45%), Gaps = 3/394 (0%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           + L + + M      P +  CT L+      R      +V + + + G   ++  YN LI
Sbjct: 103 ESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFGQ-PDVFAYNALI 161

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           +  CK + +D   ++L  M  KD   D  TYN +I   C +G    AL V D++  +   
Sbjct: 162 NGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLSDNCQ 221

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
           P ++TY  LI     EG + EA +L  ++  +G  P+  TY T+I G C+   ++ A  +
Sbjct: 222 PTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEM 281

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
              +  KG  P V++YN +LR L  +G+  +  +L+ +M  +K  P+ VT + LI   C+
Sbjct: 282 IRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCR 341

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            G    AM +   M E GL  D ++Y  LI  FC+   +D+A E L  M+  G  P   +
Sbjct: 342 DGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVN 401

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+ ++   C     +  L++  +    G   + S Y  +            A  +   M 
Sbjct: 402 YNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMV 461

Query: 506 GNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
            NGI  D + Y S+     R G      ++L DM
Sbjct: 462 SNGIDPDEITYNSMISCLCREGMVDKAFELLVDM 495



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 94/327 (28%), Positives = 159/327 (48%), Gaps = 4/327 (1%)

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI-KGATPNHV 304
           C+ G + E+L + + M R+G +PD++    LI GF     + +A R+   + K   P+  
Sbjct: 96  CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFGQPDVF 155

Query: 305 TYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM 364
            Y  LI+G+C+ N +++A R+ + M +K   P  VTYN ++  LC  G++  A ++L+++
Sbjct: 156 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQL 215

Query: 365 NEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEM 424
                 P  +T   LI A    G    A+K+ + ML  GL  D FTY  +I G CK   +
Sbjct: 216 LSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMV 275

Query: 425 DIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRAL 484
           D A E++  +   G  P   SY+ L+    N+   E   KL+ +  S     +V  Y  L
Sbjct: 276 DRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSIL 335

Query: 485 IRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL 544
           I   C+  K++ A  L  LM+  G+  D+  Y  L  A+ R G      + L+ M     
Sbjct: 336 ITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGC 395

Query: 545 MITLKIYRSFSASYAKD---NEILDLF 568
           +  +  Y +  A+  K+   ++ L++F
Sbjct: 396 LPDIVNYNTVLATLCKNGKADQALEIF 422



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/257 (25%), Positives = 105/257 (40%), Gaps = 38/257 (14%)

Query: 344 ILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAG 403
           I  + C+ G   ++  LL  M  K   PD + C  LI  +  + +   A++V   +LE  
Sbjct: 91  IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVM-EILEKF 149

Query: 404 LMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNN----- 458
              D F Y ALI+GFCK   +D A  +L  M    FSP   +Y+ ++   C++       
Sbjct: 150 GQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL 209

Query: 459 -------------------------------EEALLKLLDEFVSRGLCVDVSVYRALIRR 487
                                          +EA LKLLDE +SRGL  D+  Y  +IR 
Sbjct: 210 KVLDQLLSDNCQPTVITYTILIEATMLEGGVDEA-LKLLDEMLSRGLKPDMFTYNTIIRG 268

Query: 488 FCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMIT 547
            CK+  VD A  +   ++  G   D + Y  L  A    G+ +    ++  M+  +    
Sbjct: 269 MCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPN 328

Query: 548 LKIYRSFSASYAKDNEI 564
           +  Y     +  +D +I
Sbjct: 329 VVTYSILITTLCRDGKI 345


>gi|358346655|ref|XP_003637381.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503316|gb|AES84519.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1023

 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 141/550 (25%), Positives = 231/550 (42%), Gaps = 68/550 (12%)

Query: 107 RDFLSTPSVLNALVKIHDD----PDGNSHVLSWLVIFYANLKMTQDGLQV----FDQMRV 158
           R F  TP       +IH D    P   +H+          L +T D        F  MR 
Sbjct: 28  RFFYPTPITRTFSSQIHKDSIFIPPTKTHLYVSFFCTLIRLYLTHDRFSTASATFSHMRA 87

Query: 159 HNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDK 218
             L+P L     LL       L   V  +Y  M+  GVV ++   NVL+H+ CK  D+D 
Sbjct: 88  LGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDMLFCGVVPDVFSVNVLVHSLCKVGDLDL 147

Query: 219 VEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIH 278
               L   +  D+  D  TYNT+I  +C+KG+  +   +   M + G+  D +T N L+ 
Sbjct: 148 ALGYLRNNDVVDI--DNVTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVK 205

Query: 279 GFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYP 336
           G+CR G ++ A  +  ++   G T + +   TLIDGYC A  + +A  L E      V  
Sbjct: 206 GYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGYCEAGLMSQATELIENSWRSDVKI 265

Query: 337 GVVTYNSILRKLCKEGRIRDANRLLNEM------------------NE-KKIAPDNVTCN 377
            +VTYN++L+  CK G +  A  L NE+                  NE K + P  VT  
Sbjct: 266 DIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYT 325

Query: 378 TLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA 437
           TLI AYCK      +  +  +M+  G+M D  T  ++++GFC+  ++  A  L   M + 
Sbjct: 326 TLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEM 385

Query: 438 GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDV------------------- 478
           G  P++ SY+ +++             L  + V RG+  D+                   
Sbjct: 386 GLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEA 445

Query: 479 ----------------SVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYA 522
                             Y AL+  +CK  K++ A+ +   M+   +  + + ++S+   
Sbjct: 446 EEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIING 505

Query: 523 YWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASY--AKDNEILDLFWSHVVDRGLMSK 580
           Y + G      D+L +M +R +M    +Y      Y  A + ++ D F   +  R L   
Sbjct: 506 YAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEES 565

Query: 581 HIFKEMQLRN 590
           ++  ++ L N
Sbjct: 566 NVIFDILLNN 575



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 110/395 (27%), Positives = 197/395 (49%), Gaps = 25/395 (6%)

Query: 181 TDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEM-------------- 226
           T+++   ++  V++ +V     YN L+ A CK+ D+ + E L  E+              
Sbjct: 252 TELIENSWRSDVKIDIVT----YNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNND 307

Query: 227 -----EFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFC 281
                E K+++  L TY TLIA YCK     E+ ++  +M   GI PD+VT +S+++GFC
Sbjct: 308 VVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFC 367

Query: 282 REGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVV 339
           R G++ EA  LFR++   G  PNHV+Y T+I+   ++  + EA  L+  M  +G+   +V
Sbjct: 368 RHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIV 427

Query: 340 TYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRM 399
           T  +++  L K G+ ++A  +   + +  +AP+ VT + L++ YCK+G    A  V  +M
Sbjct: 428 TCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKM 487

Query: 400 LEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNE 459
            +  +  +  T+ ++I+G+ K   +  A ++L  M+     P+   Y+ L+DGY     +
Sbjct: 488 EKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQ 547

Query: 460 EALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
           +       E  SR L     ++  L+    +  ++D A+ L   M   GI  D V Y SL
Sbjct: 548 DVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASL 607

Query: 520 AYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSF 554
              Y++ G   A   I+ +M  + +   +  Y + 
Sbjct: 608 IDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNAL 642



 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 121/457 (26%), Positives = 213/457 (46%), Gaps = 7/457 (1%)

Query: 115 VLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNS 174
           VL  + K H  P  N    S ++  YA   M    + V  +M   N+MP+     +L++ 
Sbjct: 483 VLQKMEKEHVPP--NVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDG 540

Query: 175 LAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRAD 234
             K    D+     K+M    +  +  ++++L++   +   +D+   L+ +M  K +  D
Sbjct: 541 YFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPD 600

Query: 235 LFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR 294
           +  Y +LI  Y K+G    AL++   M+ + I  D+V YN+LI G  R G+        R
Sbjct: 601 IVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYVCSR 660

Query: 295 DIK-GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGR 353
            I+ G  P+ +TY T+I+ YC     E+AL +   M + G+ P  VTYN ++  LCK G 
Sbjct: 661 MIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGA 720

Query: 354 IRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKA 413
           +  A   L+EM   +  P  +T   L+ AY +       +++  +++ +GL L    Y  
Sbjct: 721 VEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNT 780

Query: 414 LIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
           LI  FC+      AK +L  M+  G S    +Y+ L+ GYC  ++ E  LK   +    G
Sbjct: 781 LITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDG 840

Query: 474 LCVDVSVYRALIRRFCKK----EKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEP 529
           +  +++ Y  L+          E ++  ++L + M   G++ ++  Y  L   Y R G  
Sbjct: 841 IAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNR 900

Query: 530 KACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
           K    +  +M  +  + TLK Y    + YAK  ++++
Sbjct: 901 KKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIE 937



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 113/403 (28%), Positives = 194/403 (48%), Gaps = 17/403 (4%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           V  Q  + NL P L   T L+ +  K    +    +YKKM+  G++ ++   + +++  C
Sbjct: 308 VVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFC 367

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           +   + +   L  EM    +  +  +Y T+I    K G   EA  +Q +M   GIS DIV
Sbjct: 368 RHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIV 427

Query: 272 TYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           T  +++ G  + G+ +EA  +F  I      PN VTY+ L+DGYC+   +E A  + + M
Sbjct: 428 TCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKM 487

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
             + V P V+T++SI+    K+G +  A  +L EM ++ + P+ +    LI+ Y K G+ 
Sbjct: 488 EKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQ 547

Query: 390 ASA----MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
             A     ++K+R LE         +  L++   +   MD A+ L+  M   G  P   +
Sbjct: 548 DVADDFCKEMKSRRLEE----SNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVN 603

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVD---YAQRLFN 502
           Y+ L+DGY  + N+ A L ++ E   + +  DV  Y ALI+   +  K D      R+  
Sbjct: 604 YASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYVCSRMIE 663

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
           L    G+  D + Y ++   Y   G+ +   DIL++M    +M
Sbjct: 664 L----GLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIM 702



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 118/442 (26%), Positives = 204/442 (46%), Gaps = 21/442 (4%)

Query: 145 MTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYN 204
           +   G  +  +M    L      C +L+    +  L      V   +V  GV  ++   N
Sbjct: 177 LVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLN 236

Query: 205 VLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKG-------MHYEALAV 257
            LI   C++  + +  +L+      DV+ D+ TYNTL+  +CK G       +  E L  
Sbjct: 237 TLIDGYCEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGF 296

Query: 258 ---QDRM---------EREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNH 303
              +DR+         E + + P +VTY +LI  +C+   + E+  L++ +   G  P+ 
Sbjct: 297 WKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDV 356

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
           VT ++++ G+CR   L EA  L   M   G+ P  V+Y +I+  L K GR+ +A  L ++
Sbjct: 357 VTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQ 416

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
           M  + I+ D VTC T+++   K+G T  A +V   +L+  L  +  TY AL+ G+CK  +
Sbjct: 417 MVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGK 476

Query: 424 MDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRA 483
           M++A+ +L  M      P+  ++S +++GY  K      + +L E V R +  +  VY  
Sbjct: 477 MELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAI 536

Query: 484 LIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRR 543
           LI  + K  + D A      M+   +   +VI+  L     R G       ++ DMY + 
Sbjct: 537 LIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKG 596

Query: 544 LMITLKIYRSFSASYAKDNEIL 565
           +   +  Y S    Y K+   L
Sbjct: 597 IDPDIVNYASLIDGYFKEGNQL 618



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 106/465 (22%), Positives = 211/465 (45%), Gaps = 40/465 (8%)

Query: 134 SWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAK-DRLTDMVWKVYKKMV 192
           + L+  Y      ++   ++ +M ++ +MP +  C+ +L    +  +LT+    ++++M 
Sbjct: 325 TTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAV-LFREMY 383

Query: 193 QLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHY 252
           ++G+  N   Y  +I++  KS  V +   L  +M  + +  D+ T  T++    K G   
Sbjct: 384 EMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTK 443

Query: 253 EALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKG--ATPNHVTYTTLI 310
           EA  V + + +  ++P+ VTY++L+ G+C+ G+M  A  + + ++     PN +T++++I
Sbjct: 444 EAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSII 503

Query: 311 DGYCRANDLEEALRLREVMAAKGVYPGVVTY------------NSILRKLCKE------- 351
           +GY +   L +A+ +   M  + V P  + Y              +    CKE       
Sbjct: 504 NGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLE 563

Query: 352 ----------------GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKV 395
                           GR+ +A  L+ +M  K I PD V   +LI+ Y K G+  +A+ +
Sbjct: 564 ESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSI 623

Query: 396 KNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCN 455
              M E  +  D   Y ALI G  +  + D  + +   M++ G +P   +Y+ +++ YC 
Sbjct: 624 VQEMKEKNIRFDVVAYNALIKGLLRLGKYD-PRYVCSRMIELGLAPDCITYNTIINTYCI 682

Query: 456 KNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVI 515
           K   E  L +L+E  S G+  +   Y  LI   CK   V+ A+   + M     +   + 
Sbjct: 683 KGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPIT 742

Query: 516 YTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAK 560
           +  L  AY R+ +      I + +    L ++L +Y +    + +
Sbjct: 743 HKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCR 787



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 85/309 (27%), Positives = 152/309 (49%), Gaps = 6/309 (1%)

Query: 160 NLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKV 219
            L P       ++N+      T+    +  +M   G++ N   YN+LI   CK+  V+K 
Sbjct: 665 GLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKA 724

Query: 220 EKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHG 279
           E  L EM   +      T+  L+  Y +     + L + +++   G+   +  YN+LI  
Sbjct: 725 ESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITV 784

Query: 280 FCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPG 337
           FCR G  R+A+ +  ++  +G + + VTY  LI GYC  + +E+AL+    M   G+ P 
Sbjct: 785 FCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPN 844

Query: 338 VVTYNSILRKLCKEG----RIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAM 393
           + TYN++L  L   G     + +  +L++EMNE+ + P+  T + L++ Y ++G+    +
Sbjct: 845 ITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTI 904

Query: 394 KVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGY 453
            +   M+  G +    TY  LI  + K+ +M  A+ELL  +L  G  P+  +Y  L  G+
Sbjct: 905 ILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEARELLNDLLTKGRIPNSFTYDILTCGW 964

Query: 454 CNKNNEEAL 462
            N + E  +
Sbjct: 965 LNLSYEPEI 973


>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
 gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
          Length = 1035

 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 116/492 (23%), Positives = 227/492 (46%), Gaps = 22/492 (4%)

Query: 63  FFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKI 122
           F +  +  +P     + ++ T+I  L K + F  A+ + +++                 I
Sbjct: 226 FLEMMDRGIP---PDVVTYTTVIDGLCKAQLFDRAEAVFQQM-----------------I 265

Query: 123 HDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTD 182
            +    N    + L+  Y ++   ++ +++ ++M      P+      LLN L K+    
Sbjct: 266 DNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCR 325

Query: 183 MVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLI 242
                +  M+  G+  ++  Y +++H       + ++  LL  M    +  +   +N   
Sbjct: 326 EARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFF 385

Query: 243 ALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGAT 300
           + Y K G+  +A+ + ++M ++G+SPD V+Y +LI   C+ GR+ +A   F  +  +G T
Sbjct: 386 SAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVT 445

Query: 301 PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRL 360
           P+ V +++L+ G C  +  E+   L   M   G++P +V +N+IL  LCKEGR+ +  RL
Sbjct: 446 PDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRL 505

Query: 361 LNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCK 420
           ++ +    + PD ++ NTLI+ +C  G    A K+   M+  GL  D F+Y  L+HG+CK
Sbjct: 506 VDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCK 565

Query: 421 AKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSV 480
           A  +D A      ML  G +P   +Y+ ++ G           +L    ++ G   D+  
Sbjct: 566 AGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYT 625

Query: 481 YRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMY 540
           Y  ++   CK   VD A ++F  +   G+  + + +  +  A  + G  +   D+   + 
Sbjct: 626 YNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIP 685

Query: 541 RRRLMITLKIYR 552
              L+  +  YR
Sbjct: 686 ANGLVQNVVTYR 697



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 108/391 (27%), Positives = 186/391 (47%), Gaps = 5/391 (1%)

Query: 142 NLKMTQDGLQVFDQM---RVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVA 198
           N K  ++ L++   M   +V +  P++ + + ++N    +   D  + ++ +M+  G+  
Sbjct: 177 NEKRAEEALELLHMMADDQVWSCPPNVVSYSTVINGFFTEGQVDKPYNLFLEMMDRGIPP 236

Query: 199 NIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQ 258
           ++  Y  +I   CK+   D+ E +  +M    V+ ++ TYN LI  Y   G   E + + 
Sbjct: 237 DVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRML 296

Query: 259 DRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRA 316
           + M   G  P+  TY SL++  C+ GR REAR  F  +  KG  P+  TY  ++ GY   
Sbjct: 297 EEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATK 356

Query: 317 NDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTC 376
             L E   L  +M A G+ P    +N       K G I  A  + N+M ++ ++PD V+ 
Sbjct: 357 GALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSY 416

Query: 377 NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD 436
             LI+A CK+G    A    N+M+  G+  D   + +L++G C   + +  +EL F ML+
Sbjct: 417 GALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLN 476

Query: 437 AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDY 496
            G  P+   ++ ++   C +       +L+D     G+  DV  Y  LI   C    +D 
Sbjct: 477 VGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDE 536

Query: 497 AQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
           A +L   M   G+  DS  Y +L + Y +AG
Sbjct: 537 ASKLLEGMVSVGLKPDSFSYNTLLHGYCKAG 567



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 103/378 (27%), Positives = 177/378 (46%), Gaps = 2/378 (0%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
            +F +M    + P +   T +++ L K +L D    V+++M+  GV  NI  YN LIH  
Sbjct: 224 NLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGY 283

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
                  +V ++L EM     + +  TY +L+   CK G   EA    D M  +GI P +
Sbjct: 284 LSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSV 343

Query: 271 VTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
            TY  ++HG+  +G + E   L   +   G +PNH  +      Y +   +++A+ +   
Sbjct: 344 TTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNK 403

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M  +G+ P  V+Y +++  LCK GR+ DA    N+M  + + PD V  ++L+   C +  
Sbjct: 404 MRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDK 463

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
                ++   ML  G+  +   +  ++   CK   +   + L+  +   G  P   SY+ 
Sbjct: 464 WEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNT 523

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG 508
           L+DG+C     +   KLL+  VS GL  D   Y  L+  +CK  ++D A   F  M  NG
Sbjct: 524 LIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNG 583

Query: 509 ILGDSVIYTSLAYAYWRA 526
           I    V Y ++ +  ++ 
Sbjct: 584 ITPGVVTYNTILHGLFQT 601



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 125/532 (23%), Positives = 235/532 (44%), Gaps = 38/532 (7%)

Query: 48  LNLYNCCHIPSLSCAFFKW-------AESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNM 100
           ++ YNC     LS    KW        E +    K +  ++ ++++ L KN   + A+  
Sbjct: 273 IDTYNCLIHGYLSIG--KWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFF 330

Query: 101 LEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHN 160
            + +  +     PSV    + +H                YA      +   + + M  + 
Sbjct: 331 FDSMIGKGI--KPSVTTYGIMLHG---------------YATKGALSEMHDLLNLMVANG 373

Query: 161 LMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVE 220
           + P+ H   +  ++ AK  + D    ++ KM Q G+  +   Y  LI A CK   VD  E
Sbjct: 374 ISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAE 433

Query: 221 KLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGF 280
               +M  + V  D+  +++L+   C      +   +   M   GI P+IV +N+++   
Sbjct: 434 VKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNL 493

Query: 281 CREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGV 338
           C+EGR+ E +RL   I+  G  P+ ++Y TLIDG+C A  ++EA +L E M + G+ P  
Sbjct: 494 CKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDS 553

Query: 339 VTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNR 398
            +YN++L   CK GRI  A     +M    I P  VT NT+++   +    + A ++   
Sbjct: 554 FSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLN 613

Query: 399 MLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNN 458
           M+ +G   D +TY  +++G CK+  +D A ++   +   G   +  +++ ++        
Sbjct: 614 MINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGR 673

Query: 459 EEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTS 518
           +E  + L     + GL  +V  YR ++    ++  ++    LF+ M+ NG   +S +  +
Sbjct: 674 KEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNA 733

Query: 519 LAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWS 570
           L       G          D+ R    ++    R+FS   +  + ++ +F S
Sbjct: 734 LVRRLLHRG----------DISRAGAYLSKLDERNFSVEASTTSMLISIFSS 775



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 120/455 (26%), Positives = 194/455 (42%), Gaps = 79/455 (17%)

Query: 204 NVLIHACCKSSDV-DKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRME 262
           N L++  C    V + ++ LL  M       D  +YN L+   C +    EAL +   M 
Sbjct: 133 NQLLNGLCDGKRVGEAMDVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMA 192

Query: 263 REGI---SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRAN 317
            + +    P++V+Y+++I+GF  EG++ +   LF ++  +G  P+ VTYTT+IDG C+A 
Sbjct: 193 DDQVWSCPPNVVSYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQ 252

Query: 318 DLE-----------------------------------EALRLREVMAAKGVYPGVVTYN 342
             +                                   E +R+ E M+A G  P   TY 
Sbjct: 253 LFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYG 312

Query: 343 SILRKLCKEGRIRDA-----------------------------------NRLLNEMNEK 367
           S+L  LCK GR R+A                                   + LLN M   
Sbjct: 313 SLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVAN 372

Query: 368 KIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIA 427
            I+P++   N   +AY K G    AM + N+M + GL  D  +Y ALI   CK   +D A
Sbjct: 373 GISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDA 432

Query: 428 KELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRR 487
           +     M++ G +P    +S LV G C  +  E + +L  E ++ G+  ++  +  ++  
Sbjct: 433 EVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCN 492

Query: 488 FCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMIT 547
            CK+ +V   QRL + ++  G+  D + Y +L   +  AG     S +L+ M    L   
Sbjct: 493 LCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPD 552

Query: 548 LKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHI 582
              Y +    Y K   I D  +SH   R ++S  I
Sbjct: 553 SFSYNTLLHGYCKAGRI-DSAYSHF--RKMLSNGI 584



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 98/375 (26%), Positives = 164/375 (43%), Gaps = 16/375 (4%)

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSS-------DVDKVEKLLCEME---FKDVRADL 235
           K++ +++     A++  +N L+ A  +SS       + + V  L   M    +  V  + 
Sbjct: 35  KLFDELLPHARPASVVAFNHLLAAVSRSSGRRSTTSESETVVSLFNRMVRDCYIKVAPNR 94

Query: 236 FTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD 295
            TY+ LI  +C+ G      A    + + G   D +  N L++G C   R+ EA  +   
Sbjct: 95  CTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAMDVLLQ 154

Query: 296 IK---GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVY---PGVVTYNSILRKLC 349
                G  P+ V+Y  L+ G C     EEAL L  +MA   V+   P VV+Y++++    
Sbjct: 155 RMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVINGFF 214

Query: 350 KEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQF 409
            EG++     L  EM ++ I PD VT  T+I+  CK      A  V  +M++ G+  +  
Sbjct: 215 TEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNID 274

Query: 410 TYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEF 469
           TY  LIHG+    +      +L  M   G  P+ C+Y  L++  C            D  
Sbjct: 275 TYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSM 334

Query: 470 VSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEP 529
           + +G+   V+ Y  ++  +  K  +     L NLM  NGI  +  I+     AY + G  
Sbjct: 335 IGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGII 394

Query: 530 KACSDILDDMYRRRL 544
               DI + M ++ L
Sbjct: 395 DKAMDIFNKMRQQGL 409



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 92/448 (20%), Positives = 169/448 (37%), Gaps = 67/448 (14%)

Query: 115 VLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNS 174
           +L  +V +   PD  S+  + L+  Y            F +M  + + P +     +L+ 
Sbjct: 540 LLEGMVSVGLKPDSFSY--NTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHG 597

Query: 175 LAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRAD 234
           L + +      ++Y  M+  G   +I+ YN++++  CKS+ VD+  K+   +  K ++ +
Sbjct: 598 LFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLN 657

Query: 235 LFTYNTLIALYCKKGMHYEAL----------AVQD------------------------- 259
           + T+N +I    K G   +A+           VQ+                         
Sbjct: 658 IITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFS 717

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFR--DIKGATPNHVTYTTLIDGYC--- 314
            ME+ G +P+    N+L+      G +  A       D +  +    T + LI  +    
Sbjct: 718 AMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDE 777

Query: 315 -------------------------RANDLEEALRLREVMAAKGVYPGVVTYNSILRKLC 349
                                    +A  +++A  L   M  KG+ P VVTYN+IL  L 
Sbjct: 778 YQHHAKSLPKKYRILNEANSSALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLF 837

Query: 350 KEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQF 409
           + GR  +A  L   M   +   +  T N ++N  CK      A K+   +   GL L+  
Sbjct: 838 QTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNII 897

Query: 410 TYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEF 469
           T+  +I    K    + A +L   +   G  P   +Y  + +    + + E    L    
Sbjct: 898 TFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGSLEEFDGLFLTM 957

Query: 470 VSRGLCVDVSVYRALIRRFCKKEKVDYA 497
              G  +D  +  AL+RR  ++  +  A
Sbjct: 958 EKSGTPLDSRLLNALVRRLLQRGDISRA 985



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 80/345 (23%), Positives = 133/345 (38%), Gaps = 77/345 (22%)

Query: 259 DRMERE---GISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGY 313
           +RM R+    ++P+  TY+ LI  FCR G +      F  I   G   +H+    L++G 
Sbjct: 80  NRMVRDCYIKVAPNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGL 139

Query: 314 CRANDLEEALR-LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI--A 370
           C    + EA+  L + M   G  P  V+YN +L+ LC E R  +A  LL+ M + ++   
Sbjct: 140 CDGKRVGEAMDVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSC 199

Query: 371 PDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL 430
           P NV                                   +Y  +I+GF    ++D    L
Sbjct: 200 PPNVV----------------------------------SYSTVINGFFTEGQVDKPYNL 225

Query: 431 LFGMLDAGFSPSYCSYSWLVDGYCNK---NNEEA-------------------------- 461
              M+D G  P   +Y+ ++DG C     +  EA                          
Sbjct: 226 FLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLS 285

Query: 462 ------LLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVI 515
                 ++++L+E  + G   +   Y +L+   CK  +   A+  F+ M G GI      
Sbjct: 286 IGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTT 345

Query: 516 YTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAK 560
           Y  + + Y   G      D+L+ M    +     I+  F ++YAK
Sbjct: 346 YGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAK 390


>gi|302821741|ref|XP_002992532.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
 gi|300139734|gb|EFJ06470.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
          Length = 759

 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 120/420 (28%), Positives = 216/420 (51%), Gaps = 10/420 (2%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N  V S L+  Y         +++F+ M+V    P+L     ++++ +K        +++
Sbjct: 154 NVFVYSSLICAYGRSGKLAKAVEIFEAMKV-VCKPNLVVYNAVIDACSKGGDYPTALRIF 212

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
           ++M++ G+  +   +N LI A  +++  ++ +++  EME + +  D  TYNTLIA YC+ 
Sbjct: 213 REMLEQGMSPDRITFNTLISAAGRANRWEECDRIFAEMEERGIARDDVTYNTLIATYCRG 272

Query: 249 G-MHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGAT--PNHVT 305
           G MH  A  ++   +  GI P ++TY+++I G+ + G   EA  LF++++     P+ + 
Sbjct: 273 GQMHLGAALMETMAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALFQEMRNQNVEPDGIC 332

Query: 306 YTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMN 365
           Y T++D + R  + +EA  +R  M   G    +VTYN++L    K+G+ R+A  LL EM 
Sbjct: 333 YNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMK 392

Query: 366 EKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMD 425
           ++  +P+ +T + LI+AYCK G    AM +   + +AGL  D   Y  L+ G CK    D
Sbjct: 393 QRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPD 452

Query: 426 IAKELLFGMLDAGFSPSYCSYSWLVDGYCNK--NNEEALLKLLDEFVSR-GLCVDVSV-- 480
            A  LL  M D G  P+  +Y+ L+D Y  +     +   KL    + R  + +  S+  
Sbjct: 453 EALALLEEMADNGIRPNVITYNSLLDAYGRQCLMVRKTFPKLRFFLLPRVTMLLKPSMQD 512

Query: 481 -YRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
             ++L+    K+  V  A R+F  M  NG+  + V ++S+  A       +  S++L+ M
Sbjct: 513 DQQSLVDPKQKQALVLAAARVFREMAKNGVKPNVVTFSSILNACSHCASVEDASNLLEAM 572



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 111/360 (30%), Positives = 176/360 (48%), Gaps = 4/360 (1%)

Query: 169 TVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEF 228
           + +++SL +   +D    ++ + V  G   N+ +Y+ LI A  +S  + K  ++   M+ 
Sbjct: 124 STIISSLGRLGRSDWAQLIFDRAVGAGFGNNVFVYSSLICAYGRSGKLAKAVEIFEAMKV 183

Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
              + +L  YN +I    K G +  AL +   M  +G+SPD +T+N+LI    R  R  E
Sbjct: 184 V-CKPNLVVYNAVIDACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRANRWEE 242

Query: 289 ARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMA-AKGVYPGVVTYNSIL 345
             R+F ++  +G   + VTY TLI  YCR   +     L E MA + G+ P V+TY++++
Sbjct: 243 CDRIFAEMEERGIARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITYSTMI 302

Query: 346 RKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLM 405
               K G   +A  L  EM  + + PD +  NT+++ + ++G+   A  ++  M EAG  
Sbjct: 303 DGYAKLGLAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFA 362

Query: 406 LDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKL 465
            D  TY AL+  + K  +   A  LL  M   G SP+  +YS L+D YC        + L
Sbjct: 363 KDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMAL 422

Query: 466 LDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWR 525
             +    GL  DV +Y  L+   CK    D A  L   M  NGI  + + Y SL  AY R
Sbjct: 423 FQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEMADNGIRPNVITYNSLLDAYGR 482



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 88/330 (26%), Positives = 159/330 (48%), Gaps = 4/330 (1%)

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           ++F Y++LI  Y + G   +A+ + + M +    P++V YN++I    + G    A R+F
Sbjct: 154 NVFVYSSLICAYGRSGKLAKAVEIFEAM-KVVCKPNLVVYNAVIDACSKGGDYPTALRIF 212

Query: 294 RDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
           R++  +G +P+ +T+ TLI    RAN  EE  R+   M  +G+    VTYN+++   C+ 
Sbjct: 213 REMLEQGMSPDRITFNTLISAAGRANRWEECDRIFAEMEERGIARDDVTYNTLIATYCRG 272

Query: 352 GRIRDANRLLNEMNEKK-IAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
           G++     L+  M +   I P  +T +T+I+ Y K+G    A+ +   M    +  D   
Sbjct: 273 GQMHLGAALMETMAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALFQEMRNQNVEPDGIC 332

Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFV 470
           Y  ++    +    D A  +   M +AGF+    +Y+ L+D Y  +      + LL+E  
Sbjct: 333 YNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMK 392

Query: 471 SRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPK 530
            RG   ++  Y ALI  +CK      A  LF  ++  G+  D V+Y++L     + G P 
Sbjct: 393 QRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPD 452

Query: 531 ACSDILDDMYRRRLMITLKIYRSFSASYAK 560
               +L++M    +   +  Y S   +Y +
Sbjct: 453 EALALLEEMADNGIRPNVITYNSLLDAYGR 482


>gi|297821008|ref|XP_002878387.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297324225|gb|EFH54646.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 766

 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 127/479 (26%), Positives = 225/479 (46%), Gaps = 23/479 (4%)

Query: 73  NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHV 132
           N K+S Q    +I +L +N     A  +L+++  ++ +  P+ + A + +H+        
Sbjct: 181 NMKNS-QVRNVVIDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHE-------- 231

Query: 133 LSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMV 192
                ++   L   +  + +  +   H + P+    T  ++SL K+  T+  W +   ++
Sbjct: 232 -----VWKGRLLTEEKIIGLISRFSSHGVSPNSVWLTRFISSLCKNARTNAAWDILSDLM 286

Query: 193 QLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHY 252
           +         +N L+    ++ ++ ++  L+ +M+   +R D+ T   LI   CK     
Sbjct: 287 KNKAPLEAPPFNALLSCLGRNMNIGRMNALVLKMDEMKIRPDVVTLGILINTLCKSRRVD 346

Query: 253 EALAVQDRM------EREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK---GATPNH 303
           EAL V ++M      +   I  D + +N+LI G C+ GR++EA  L   +K      PN 
Sbjct: 347 EALQVFEQMCGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKMEERCVPNT 406

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
           VTY  LIDGYCRA  LE A  +   M   G+ P VVT N+I+  +C+   +  A     +
Sbjct: 407 VTYNCLIDGYCRAGKLETAKEVVSRMKEDGIKPDVVTVNTIVGGMCRHHGLNMAVLFFMD 466

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
           M ++ +  + VT  TLI+A C + +   AM   ++MLEAG   D   Y ALI G C+ + 
Sbjct: 467 MEKEGVKGNVVTYMTLIHACCSLSNIEKAMHWFDKMLEAGCSPDAKIYYALISGLCQVRR 526

Query: 424 MDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRA 483
              A  ++  + + GFS    +Y+ L+  +C+KNN E + ++L +    G+  D   Y  
Sbjct: 527 DHDAIRVVEKLREGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGMKPDSITYNT 586

Query: 484 LIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRR 542
           LI  F K +  +  +R+   M+ + +      Y ++  AY   GE      +  DM  R
Sbjct: 587 LISFFGKHKDFESVERMMEQMREDELDPTVATYGAVIEAYCSVGELGEALKLFKDMGLR 645



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 115/469 (24%), Positives = 206/469 (43%), Gaps = 22/469 (4%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQM--RVHNLMPHLHACTVLLNSLAKDRL--TDMV 184
           NS V + ++       +  D  +V D+M  +     P+     ++L+ + K RL   + +
Sbjct: 184 NSQVRNVVIDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKGRLLTEEKI 243

Query: 185 WKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIAL 244
             +  +    GV  N       I + CK++  +    +L ++       +   +N L++ 
Sbjct: 244 IGLISRFSSHGVSPNSVWLTRFISSLCKNARTNAAWDILSDLMKNKAPLEAPPFNALLSC 303

Query: 245 YCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGA----- 299
             +        A+  +M+   I PD+VT   LI+  C+  R+ EA ++F  + G      
Sbjct: 304 LGRNMNIGRMNALVLKMDEMKIRPDVVTLGILINTLCKSRRVDEALQVFEQMCGKRTDDG 363

Query: 300 ---TPNHVTYTTLIDGYCRANDLEEA--LRLREVMAAKGVYPGVVTYNSILRKLCKEGRI 354
                + + + TLIDG C+   L+EA  L +R  M  + V P  VTYN ++   C+ G++
Sbjct: 364 NVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKMEERCV-PNTVTYNCLIDGYCRAGKL 422

Query: 355 RDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKAL 414
             A  +++ M E  I PD VT NT++   C+      A+     M + G+  +  TY  L
Sbjct: 423 ETAKEVVSRMKEDGIKPDVVTVNTIVGGMCRHHGLNMAVLFFMDMEKEGVKGNVVTYMTL 482

Query: 415 IHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGL 474
           IH  C    ++ A      ML+AG SP    Y  L+ G C    +   ++++++    G 
Sbjct: 483 IHACCSLSNIEKAMHWFDKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLREGGF 542

Query: 475 CVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSD 534
            +D+  Y  LI  FC K   +    +   M+  G+  DS+ Y +L   + +  + ++   
Sbjct: 543 SLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGMKPDSITYNTLISFFGKHKDFESVER 602

Query: 535 ILDDMYRRRLMITLKIYRSFSASYAKDNEI---LDLFWSHVVDRGLMSK 580
           +++ M    L  T+  Y +   +Y    E+   L LF     D GL SK
Sbjct: 603 MMEQMREDELDPTVATYGAVIEAYCSVGELGEALKLFK----DMGLRSK 647



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 77/304 (25%), Positives = 142/304 (46%), Gaps = 3/304 (0%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           +V  +M+   + P +     ++  + +    +M    +  M + GV  N+  Y  LIHAC
Sbjct: 427 EVVSRMKEDGIKPDVVTVNTIVGGMCRHHGLNMAVLFFMDMEKEGVKGNVVTYMTLIHAC 486

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
           C  S+++K      +M       D   Y  LI+  C+    ++A+ V +++   G S D+
Sbjct: 487 CSLSNIEKAMHWFDKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLREGGFSLDL 546

Query: 271 VTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREV 328
           + YN LI  FC +    +   +  D++  G  P+ +TY TLI  + +  D E   R+ E 
Sbjct: 547 LAYNMLIGLFCDKNNAEKVYEMLTDMEKEGMKPDSITYNTLISFFGKHKDFESVERMMEQ 606

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMN-EKKIAPDNVTCNTLINAYCKIG 387
           M    + P V TY +++   C  G + +A +L  +M    K+ P+ V  N LINA+ K+G
Sbjct: 607 MREDELDPTVATYGAVIEAYCSVGELGEALKLFKDMGLRSKVNPNTVIYNILINAFSKLG 666

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
           +   A+ +K  M    +  +  TY AL     +  + +   +L+  M++    P+  +  
Sbjct: 667 NFGQALSLKEEMKMKMVRPNVETYNALFKCLKEKNQAETLLKLMDEMVEQSCEPNQITME 726

Query: 448 WLVD 451
            L++
Sbjct: 727 ILME 730



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 69/256 (26%), Positives = 133/256 (51%), Gaps = 5/256 (1%)

Query: 130 SHVLSWLVIFYA--NLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKV 187
            +V++++ + +A  +L   +  +  FD+M      P       L++ L + R      +V
Sbjct: 474 GNVVTYMTLIHACCSLSNIEKAMHWFDKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRV 533

Query: 188 YKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCK 247
            +K+ + G   ++  YN+LI   C  ++ +KV ++L +ME + ++ D  TYNTLI+ + K
Sbjct: 534 VEKLREGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGMKPDSITYNTLISFFGK 593

Query: 248 KGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI---KGATPNHV 304
                    + ++M  + + P + TY ++I  +C  G + EA +LF+D+       PN V
Sbjct: 594 HKDFESVERMMEQMREDELDPTVATYGAVIEAYCSVGELGEALKLFKDMGLRSKVNPNTV 653

Query: 305 TYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM 364
            Y  LI+ + +  +  +AL L+E M  K V P V TYN++ + L ++ +     +L++EM
Sbjct: 654 IYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLKEKNQAETLLKLMDEM 713

Query: 365 NEKKIAPDNVTCNTLI 380
            E+   P+ +T   L+
Sbjct: 714 VEQSCEPNQITMEILM 729



 Score = 48.5 bits (114), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 41/179 (22%), Positives = 77/179 (43%), Gaps = 3/179 (1%)

Query: 126 PDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVW 185
           PD  ++  + L+ F+   K  +   ++ +QMR   L P +     ++ +           
Sbjct: 579 PDSITY--NTLISFFGKHKDFESVERMMEQMREDELDPTVATYGAVIEAYCSVGELGEAL 636

Query: 186 KVYKKM-VQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIAL 244
           K++K M ++  V  N  +YN+LI+A  K  +  +   L  EM+ K VR ++ TYN L   
Sbjct: 637 KLFKDMGLRSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKC 696

Query: 245 YCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGATPNH 303
             +K      L + D M  +   P+ +T   L+        + + R+  +    A+P  
Sbjct: 697 LKEKNQAETLLKLMDEMVEQSCEPNQITMEILMERLSGSDELVKLRKFMQGYSVASPTE 755


>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
 gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
          Length = 755

 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 116/443 (26%), Positives = 197/443 (44%), Gaps = 37/443 (8%)

Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
           P + A   ++N   ++   +  + ++ +M+  G+  N+  Y  +I   CK+  VD+ + +
Sbjct: 159 PDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQVVDRAKGV 218

Query: 223 LCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR 282
             +M  + V+ D  TYN LI  Y   G   E + + + M   G+ PD +TY  L+   C+
Sbjct: 219 FQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCK 278

Query: 283 EGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVT 340
            GR REAR  F  +  KG  P+   Y  L+ GY     L E     ++M   GV P    
Sbjct: 279 NGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRI 338

Query: 341 YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML 400
           +N +     K+  I +A  + N+M ++ ++PD V+   LI+A CK+G    A+   N+M+
Sbjct: 339 FNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMI 398

Query: 401 EAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGF--------------------- 439
             G+  + F + +L++G C   + + A+EL F +LD G                      
Sbjct: 399 NEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVM 458

Query: 440 --------------SPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
                          P+  SY+ LV G+C     +   KLLD  VS GL  +   Y  L+
Sbjct: 459 EAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILL 518

Query: 486 RRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
           R +CK  +VD A  LF  M   G+      Y ++ +  ++ G     +++  +M   R  
Sbjct: 519 RGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTK 578

Query: 546 ITLKIYRSFSASYAKDNEILDLF 568
             +  Y        K+N + + F
Sbjct: 579 CDIYTYNIILNGLCKNNFVDEAF 601



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 114/430 (26%), Positives = 210/430 (48%), Gaps = 6/430 (1%)

Query: 126 PDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVW 185
           PD  ++  + L+  Y +    ++ +Q+ ++M  H L P      +LL+ L K+       
Sbjct: 229 PDNGTY--NCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREAR 286

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
             +  M + G+  ++ +Y +L+H       + ++   L  M    V  +   +N +   Y
Sbjct: 287 LFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAY 346

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNH 303
            KK M  EA+ + ++M ++G+SPD+V++ +LI   C+ GR+ +A   F  +  +G TPN 
Sbjct: 347 AKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNI 406

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
             +++L+ G C     E+A  L   +  +G+    V +N+++  LC EGR+ +A RL++ 
Sbjct: 407 FVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDL 466

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
           M    + P+ ++ NTL+  +C  G    A K+ + M+  GL  ++FTY  L+ G+CKA+ 
Sbjct: 467 MIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARR 526

Query: 424 MDIAKELLFGMLDAGFSPSYCSYSWLVDG-YCNKNNEEALLKLLDEFVSRGLCVDVSVYR 482
           +D A  L   ML  G +P   +Y+ ++ G +      EA    L+   SR  C D+  Y 
Sbjct: 527 VDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKC-DIYTYN 585

Query: 483 ALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRR 542
            ++   CK   VD A ++F  +       DSV +  +  A  + G  +   D+   +   
Sbjct: 586 IILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATISAY 645

Query: 543 RLMITLKIYR 552
            L+  +  YR
Sbjct: 646 GLVPDVVTYR 655



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 119/418 (28%), Positives = 198/418 (47%), Gaps = 9/418 (2%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAK-DRLTDMVWKV 187
           N  + + +   YA   M ++ + +F++MR   L P + +   L+++L K  R+ D V + 
Sbjct: 335 NRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQ- 393

Query: 188 YKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCK 247
           + +M+  GV  NI +++ L++  C     +K E+L  E+  + +  D   +NTL+   C 
Sbjct: 394 FNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCN 453

Query: 248 KGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI---KGATPNHV 304
           +G   EA  + D M R G+ P++++YN+L+ G C  GR+ EA +L  D+    G  PN  
Sbjct: 454 EGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLL-DVMVSNGLKPNEF 512

Query: 305 TYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM 364
           TYT L+ GYC+A  +++A  L   M  KGV P V TYN+IL  L + GR  +AN L   M
Sbjct: 513 TYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNM 572

Query: 365 NEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEM 424
              +   D  T N ++N  CK      A K+  R+      LD  T+  +I    K    
Sbjct: 573 INSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRK 632

Query: 425 DIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRAL 484
           + A +L   +   G  P   +Y  + +    + +      L       G   +  +  AL
Sbjct: 633 EDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSHMLNAL 692

Query: 485 IRRFCKKEKVDYAQ-RLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
           +RR   +  +  A   L+ L + N  L  S   TS+  + +  GE +  +  L + YR
Sbjct: 693 VRRLLHRGDISRAGVYLYKLDEKNFSLEAST--TSMLISLYSRGEYQPHAKSLPEKYR 748



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 102/414 (24%), Positives = 181/414 (43%), Gaps = 13/414 (3%)

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCK---SSDVDKVEKLLCEMEFK---DVRADL 235
           D   K++ +++     A++  +N L+    +   SS  ++V  L   M  +    V  + 
Sbjct: 31  DEALKLFDELLHCARPASVRAFNQLLTVVSRAGCSSASERVVSLFTRMARECSSKVAPNA 90

Query: 236 FTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARR--LF 293
            TY+ LI  +C+ G      A    + + G   +++  + L+ G C   R+ EA    L 
Sbjct: 91  CTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDILLL 150

Query: 294 RDIK-GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEG 352
           R  + G  P+ V Y T+I+G+ R   +E+A  L   M  +G+ P VVTY +++  LCK  
Sbjct: 151 RMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQ 210

Query: 353 RIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYK 412
            +  A  +  +M ++ + PDN T N LI+ Y   G     +++   M   GL  D  TY 
Sbjct: 211 VVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYA 270

Query: 413 ALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSR 472
            L+   CK      A+     M   G  P    Y+ L+ GY  K     +   LD  V  
Sbjct: 271 LLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGN 330

Query: 473 GLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKAC 532
           G+  +  ++  +   + KK  ++ A  +FN M+  G+  D V + +L  A  + G     
Sbjct: 331 GVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDA 390

Query: 533 SDILDDMYRRRLMITLKIYRSFS---ASYAKDNEILDLFWSHVVDRGLMSKHIF 583
               + M    +   + ++ S      +  K  +  +LF+  V+D+G+    +F
Sbjct: 391 VLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFF-EVLDQGICVDAVF 443



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 98/344 (28%), Positives = 160/344 (46%), Gaps = 15/344 (4%)

Query: 213 SSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEA---LAVQDRMERE---GI 266
           S  +D+  KL  E+      A +  +N L+ +  + G    +   +++  RM RE    +
Sbjct: 27  SLGLDEALKLFDELLHCARPASVRAFNQLLTVVSRAGCSSASERVVSLFTRMARECSSKV 86

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEA-- 322
           +P+  TY+ LI  FCR GR+      F  I   G   N +  + L+ G C A  ++EA  
Sbjct: 87  APNACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATD 146

Query: 323 -LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
            L LR  M+  G  P VV YN+++    +EG++  A  L  EM ++ I P+ VT  T+I+
Sbjct: 147 ILLLR--MSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVID 204

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
             CK      A  V  +M++ G+  D  TY  LIHG+    +     ++L  M   G  P
Sbjct: 205 GLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEP 264

Query: 442 SYCSYSWLVDGYC-NKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRL 500
              +Y+ L+D  C N    EA L   D    +G+  DV++Y  L+  +  K  +      
Sbjct: 265 DCITYALLLDYLCKNGRCREARL-FFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSF 323

Query: 501 FNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL 544
            +LM GNG+  +  I+  +  AY +    +    I + M ++ L
Sbjct: 324 LDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGL 367



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 64/290 (22%), Positives = 112/290 (38%), Gaps = 37/290 (12%)

Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
            PN  TY+ LI  +CR   LE       ++   G    V+  + +L+ LC   R+ +A  
Sbjct: 87  APNACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATD 146

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
           +L                 L+                 RM E G   D   Y  +I+GF 
Sbjct: 147 IL-----------------LL-----------------RMSEFGCPPDVVAYNTVINGFF 172

Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
           +  +++ A  L   M+D G  P+  +Y+ ++DG C     +    +  + + RG+  D  
Sbjct: 173 REGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNG 232

Query: 480 VYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
            Y  LI  +    K     ++   M  +G+  D + Y  L     + G  +      D M
Sbjct: 233 TYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSM 292

Query: 540 YRRRLMITLKIYRSFSASYAKDNEILDL--FWSHVVDRGLM-SKHIFKEM 586
           +R+ +   + IY      YA    + ++  F   +V  G+  ++ IF  M
Sbjct: 293 FRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIM 342


>gi|302760727|ref|XP_002963786.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
 gi|300169054|gb|EFJ35657.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
          Length = 432

 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 117/389 (30%), Positives = 190/389 (48%), Gaps = 21/389 (5%)

Query: 203 YNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD-RM 261
           YNVLI   C +SD+D    LL EM+ + ++ +  T + ++   C+ G   +AL   D  +
Sbjct: 28  YNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDASL 87

Query: 262 EREGISPDIVTYNSLIHGFCREGRMREARRLFRDI---KGATPNHVTYTTLIDGYCRAND 318
           E     PD+V+Y +LI+G C+ GR+  A  LFR +    G  PN  TY  L+DG C+ + 
Sbjct: 88  ELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDR 147

Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT 378
           L+ A  +      +   P VVTYN+++  L + GR+ +A     +M E+   P  V+ N 
Sbjct: 148 LDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNA 207

Query: 379 LINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAG 438
           +I   C+    A A++V N M++     +  TY  +I G CK+ ++D A++LL  M+  G
Sbjct: 208 IITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEG 267

Query: 439 FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQ 498
             P   +Y+ LV G+      ++ L LL   VS+G   DV  Y  +I + CK  +VD A 
Sbjct: 268 CRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAH 327

Query: 499 RLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASY 558
            +F  +  N    + V Y++L   Y RA        ++ +M  R  ++T           
Sbjct: 328 EIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREMACRPNVVTYNT-------- 379

Query: 559 AKDNEILDLFWS-HVVDRGLMSKHIFKEM 586
                   + W   +VDR   +  +F+EM
Sbjct: 380 --------MIWGLSMVDRNEEAYGMFREM 400



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 113/415 (27%), Positives = 194/415 (46%), Gaps = 11/415 (2%)

Query: 80  SHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHD-DPDG---NSHVLSW 135
           SH   + +  +N     A ++   + +R F +   +  A   + + D +G   N    S 
Sbjct: 6   SHNQALQLFRENPCQLPASSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSI 65

Query: 136 LVIFYANLKMTQDGLQVFD-QMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQL 194
           ++            L+ FD  + + +  P + + T L+N L K    D  + +++KMV  
Sbjct: 66  ILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAA 125

Query: 195 GVV-ANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYE 253
           G    N   YN L+   CK   +D    ++ E   +D   D+ TYNTL+A   + G   E
Sbjct: 126 GGCRPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDE 185

Query: 254 ALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLID 311
           ALA   +M  EG  P +V++N++I G CR  R+ +A  +F ++  +   PN VTY+ +ID
Sbjct: 186 ALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVID 245

Query: 312 GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAP 371
           G C+++ L+EA +L + M ++G  P +V Y  ++      GR+  A  LL  M  +   P
Sbjct: 246 GLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIP 305

Query: 372 DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
           D VT   +I+  CK+G    A ++   ++      +  TY ALI G+C+A  +D   ++ 
Sbjct: 306 DVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKV- 364

Query: 432 FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
             M +    P+  +Y+ ++ G    +  E    +  E    G   D   YR L R
Sbjct: 365 --MREMACRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGLKR 417



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 98/336 (29%), Positives = 166/336 (49%), Gaps = 4/336 (1%)

Query: 233 ADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRL 292
           A   TYN LI  +C       A ++   M+ EG+  +  T + ++ G CR GR+ +A   
Sbjct: 23  ASSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQALEH 82

Query: 293 FR---DIKGATPNHVTYTTLIDGYCRANDLEEALRL-REVMAAKGVYPGVVTYNSILRKL 348
           F    ++  A P+ V+YTTLI+G C+   ++ A  L R+++AA G  P   TYN+++  L
Sbjct: 83  FDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGL 142

Query: 349 CKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ 408
           CK+ R+  A  ++ E  ++  APD VT NTL+ A  ++G    A+    +M E G +   
Sbjct: 143 CKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTL 202

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
            ++ A+I G C+A+ +  A E+   M+D  F P+  +YS ++DG C  +  +   +LLD 
Sbjct: 203 VSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDR 262

Query: 469 FVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
            VS G   D+  Y  L+  F    ++D A  L   M   G + D V YT +     + G 
Sbjct: 263 MVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGR 322

Query: 529 PKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
                +I  ++   +    +  Y +    Y + + +
Sbjct: 323 VDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRV 358



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 52/232 (22%), Positives = 95/232 (40%), Gaps = 5/232 (2%)

Query: 348 LCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLD 407
           + + G    A +L  E N  ++   +VT N LI  +C   D  +A  +   M   G+  +
Sbjct: 1   MVRAGSHNQALQLFRE-NPCQLPASSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCN 59

Query: 408 QFTYKALIHGFCKAKEMDIAKELLFGMLD-AGFSPSYCSYSWLVDGYCNKNNEEALLKLL 466
             T   ++ G C+   +  A E     L+ A   P   SY+ L++G C     +A   L 
Sbjct: 60  DRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLF 119

Query: 467 DEFVSRGLC-VDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWR 525
            + V+ G C  +   Y AL+   CK++++D A+ +    +      D V Y +L  A ++
Sbjct: 120 RKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQ 179

Query: 526 AGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLF--WSHVVDR 575
            G           M     + TL  + +      +   + D    ++ ++DR
Sbjct: 180 LGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDR 231


>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
 gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
          Length = 702

 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 116/387 (29%), Positives = 182/387 (47%), Gaps = 5/387 (1%)

Query: 145 MTQDGLQVFDQM-RVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLY 203
           M +  ++V++Q+ R     P+L    V+L+ L K        +V+ +M+     A+   Y
Sbjct: 243 MFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMANNHQADTVTY 302

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER 263
            +LIH  C+S DVD   ++  +M    +  D+  YN+LI  +C+ G   EA    D    
Sbjct: 303 GILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWKFWDSTGF 362

Query: 264 EGISPDIVTYNSLIHGFCREGRMREARRLFRDIK---GATPNHVTYTTLIDGYCRANDLE 320
            GI   I TYN +  G    G + EA  L + ++     +P+ VT+ TLI G C      
Sbjct: 363 SGIR-QITTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLIHGLCENGYAN 421

Query: 321 EALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLI 380
            A  + E     G    V +Y+S++ + CK+GR  DAN +   M +    P++   N LI
Sbjct: 422 RAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALI 481

Query: 381 NAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFS 440
           N +C++     A+K+   M   G      TY  LI G CKA++   A  L   ML+ GF 
Sbjct: 482 NGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFK 541

Query: 441 PSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRL 500
           P   +Y+ L+ G C     +  L++ DE +  GL VDV V+  LI   C   KVD A  +
Sbjct: 542 PDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCI 601

Query: 501 FNLMQGNGILGDSVIYTSLAYAYWRAG 527
           +  M+      + V Y +L   ++  G
Sbjct: 602 YLEMKEKNCSPNLVTYNTLMDGFYEIG 628



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 111/443 (25%), Positives = 203/443 (45%), Gaps = 41/443 (9%)

Query: 125 DPDGNSHVLSWLVIFYANLKMT--QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTD 182
           DP  + ++ ++ V+     K+   ++  +V+ +M  +N         +L++ L +    D
Sbjct: 257 DPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVD 316

Query: 183 MVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLI 242
              +VY  MV+ G+V ++ +YN LI   C+     +  K      F  +R  + TYN + 
Sbjct: 317 SAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSGIR-QITTYNIMT 375

Query: 243 ALYCKKGMHYEALAVQDRMEREG-ISPDIVTYNSLIHG---------------------- 279
                 GM  EA  +  ++E +   SPD VT+ +LIHG                      
Sbjct: 376 KGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGE 435

Query: 280 -------------FCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
                        FC++GR  +A  +++++   G  PN   Y  LI+G+CR + + +A++
Sbjct: 436 ELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIK 495

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           +   M + G  P ++TYN+++  LCK  + ++A+ L  EM E+   PD  T  +LI   C
Sbjct: 496 IYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLC 555

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           +      A+++ + +L+AGL +D   +  LIHG C A ++D A  +   M +   SP+  
Sbjct: 556 RDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLV 615

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
           +Y+ L+DG+    + +    L    +  GL  D+  Y   I+  C   +      L N +
Sbjct: 616 TYNTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEV 675

Query: 505 QGNGILGDSVIYTSLAYAYWRAG 527
              GI+   + ++ L  A  + G
Sbjct: 676 LATGIMPTVITWSILVRAVIKYG 698



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 125/470 (26%), Positives = 203/470 (43%), Gaps = 44/470 (9%)

Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           + +F  +R   + P     + L++ LAK    D    +  +M   GV A+   YN L+  
Sbjct: 178 VSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQADAVCYNALLSG 237

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRA--DLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           C ++   +K  K+  E   +D  A  +L TY  ++   CK G   EA  V  RM      
Sbjct: 238 CFRTGMFEKAMKVW-EQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMANNHQ 296

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
            D VTY  LIHG CR G +  A R++ D+   G   +   Y +LI G+C      EA + 
Sbjct: 297 ADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWKF 356

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM-NEKKIAPDNVTCNTL----- 379
            +     G+   + TYN + + L   G + +A  LL ++ N+   +PD VT  TL     
Sbjct: 357 WDSTGFSGIRQ-ITTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLIHGLC 415

Query: 380 ------------------------------INAYCKIGDTASAMKVKNRMLEAGLMLDQF 409
                                         IN +CK G T  A +V   M++ G   +  
Sbjct: 416 ENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSH 475

Query: 410 TYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEF 469
            Y ALI+GFC+  +++ A ++   M   G  P+  +Y+ L+DG C     +    L  E 
Sbjct: 476 VYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEM 535

Query: 470 VSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEP 529
           + RG   D+  Y +LIR  C+ +KVD A R+++ +   G+  D +++  L +    AG+ 
Sbjct: 536 LERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKV 595

Query: 530 KACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI--LDLFWSHVVDRGL 577
                I  +M  +     L  Y +    + +   I      W+ ++D GL
Sbjct: 596 DEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGL 645



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 108/424 (25%), Positives = 186/424 (43%), Gaps = 44/424 (10%)

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
           +  N+  YN+++ + C   DVD+   L   +  + V  D  TY+TL++   K      AL
Sbjct: 154 IAPNLQTYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNAL 213

Query: 256 AVQDRMEREGISPDIVTYNSLIHGFCREGRMREA----RRLFRDIKGATPNHVTYTTLID 311
            + D M   G+  D V YN+L+ G  R G   +A     +L RD  GA+PN  TY  ++D
Sbjct: 214 DLLDEMPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRD-PGASPNLATYKVMLD 272

Query: 312 GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAP 371
           G C+    +EA  +   M A       VTY  ++  LC+ G +  A R+ ++M +  +  
Sbjct: 273 GLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVL 332

Query: 372 DNVTCNTLINAYCKIGDTASAMK------------------VKNRMLEAGLM-------- 405
           D    N+LI  +C++G T  A K                  +   +L++G++        
Sbjct: 333 DVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSGIRQITTYNIMTKGLLDSGMVSEATELLK 392

Query: 406 ---------LDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNK 456
                     D+ T+  LIHG C+    + A E+L    ++G      SYS +++ +C  
Sbjct: 393 QLENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKD 452

Query: 457 NNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIY 516
                  ++    V  G   +  VY ALI  FC+  K++ A +++  M  NG     + Y
Sbjct: 453 GRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITY 512

Query: 517 TSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDL---FWSHVV 573
            +L     +A + +  S +  +M  R     ++ Y S      +D ++ D+    W  ++
Sbjct: 513 NTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKV-DVALRIWDEIL 571

Query: 574 DRGL 577
           D GL
Sbjct: 572 DAGL 575



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 79/293 (26%), Positives = 133/293 (45%), Gaps = 20/293 (6%)

Query: 83  TMIHILTKNKHFKSAQNMLEKIALR----DFLSTPSVLNALVK--------------IHD 124
           T+IH L +N +   A  +LE         D  S  S++N   K              + D
Sbjct: 409 TLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKD 468

Query: 125 DPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMV 184
               NSHV + L+  +  +    D ++++ +M  +   P +     L++ L K       
Sbjct: 469 GCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEA 528

Query: 185 WKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIAL 244
             + K+M++ G   +I  Y  LI   C+   VD   ++  E+    ++ D+  +N LI  
Sbjct: 529 SSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHG 588

Query: 245 YCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPN 302
            C  G   EA  +   M+ +  SP++VTYN+L+ GF   G + +A  L+  I   G  P+
Sbjct: 589 LCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPD 648

Query: 303 HVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIR 355
            VTY T I G C  N   E + L   + A G+ P V+T++ ++R + K G I+
Sbjct: 649 IVTYNTRIKGLCSCNRTPEGVLLLNEVLATGIMPTVITWSILVRAVIKYGPIQ 701



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 56/235 (23%), Positives = 112/235 (47%), Gaps = 5/235 (2%)

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE----KKIAPDNVTCNTLI 380
            R++ +  G  PGV ++N++L    +  R  DA+     ++     ++IAP+  T N ++
Sbjct: 106 FRDLPSLLGCNPGVRSHNTLLDAFVRARRYSDADAFFASLSHGAFGRRIAPNLQTYNIIL 165

Query: 381 NAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFS 440
            + C  GD   A+ + + +   G+  D+ TY  L+ G  K  ++D A +LL  M + G  
Sbjct: 166 RSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQ 225

Query: 441 PSYCSYSWLVDGYCNKNNEEALLKLLDEFV-SRGLCVDVSVYRALIRRFCKKEKVDYAQR 499
                Y+ L+ G       E  +K+ ++ V   G   +++ Y+ ++   CK  +   A  
Sbjct: 226 ADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGE 285

Query: 500 LFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSF 554
           +++ M  N    D+V Y  L +   R+G+  + + +  DM +  L++ + +Y S 
Sbjct: 286 VWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSL 340


>gi|302755296|ref|XP_002961072.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
 gi|300172011|gb|EFJ38611.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
          Length = 628

 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 129/448 (28%), Positives = 194/448 (43%), Gaps = 78/448 (17%)

Query: 191 MVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGM 250
           M   G  A++  Y  LI   CKS D+D  + LL +M       ++ TY  LI   CK   
Sbjct: 1   MAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARR 60

Query: 251 HYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTT 308
            ++A+    RM R G  PD+VTYNSLIHG C   RM +A  + +++   G  PNH+TY+T
Sbjct: 61  PHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYST 120

Query: 309 LIDGYCRANDLEEALRL-REV------------------------------------MAA 331
           L+   CR   L++A  L RE+                                    M  
Sbjct: 121 LVIWNCRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMIE 180

Query: 332 KGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTAS 391
            G  P VVTYN+ +  LCK G++     +L EM+   I PD VT  ++I+  CK      
Sbjct: 181 SGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDD 240

Query: 392 AMKVKNRMLE-------------------------------------AGLMLDQFTYKAL 414
           A +V   MLE                                     AG +++ +T+ A 
Sbjct: 241 AFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAF 300

Query: 415 IHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGL 474
           I   C++ +  +AK +L GM+++G  P+  SY++++DG C   N +   KL  + +  G 
Sbjct: 301 IGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGC 360

Query: 475 C-VDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGI-LGDSVIYTSLAYAYWRAGEPKAC 532
           C  DV  +  LI  FCK  ++  A +L   M+   I + D V Y +L     + G  K  
Sbjct: 361 CKPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQA 420

Query: 533 SDILDDMYRRRLMITLKIYRSFSASYAK 560
             +L +M        +  Y +    YAK
Sbjct: 421 KLLLQEMQAVGCKPNVVTYAALINGYAK 448



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 132/501 (26%), Positives = 220/501 (43%), Gaps = 60/501 (11%)

Query: 70  AVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGN 129
           A   Y  S+ ++ T+I  L K+    +AQ +L+K+A  D    P+V+             
Sbjct: 2   AANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMA--DAGCAPNVV------------- 46

Query: 130 SHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYK 189
               + L+      +   D +Q   +M      P L     L++ L      D    V +
Sbjct: 47  --TYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQ 104

Query: 190 KMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLL----------------------CEME 227
           ++V+ G   N   Y+ L+   C+   +D+   L+                      CE  
Sbjct: 105 ELVRNGFAPNHITYSTLVIWNCRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEAR 164

Query: 228 FKDVR---------------ADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVT 272
            +  R                D+ TYNT I+  CK G   + L + + M+R GI PD+VT
Sbjct: 165 CQSSRYECRDGDEMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVT 224

Query: 273 YNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMA 330
           + S+I G C+  R+ +A ++F+ +  +G  P+ +TY+ ++D   RAN L+    + E M 
Sbjct: 225 FCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQ 284

Query: 331 A--KGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           A   G    V T+N+ +  LC+ G+   A  +L  M E    P+ ++ N +I+  CK G+
Sbjct: 285 AMKAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGN 344

Query: 389 TASAMKVKNRMLEAGLM-LDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFS-PSYCSY 446
              A K+  +ML++G    D   +  LI GFCKA  +  A +LL  M       P   +Y
Sbjct: 345 VDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTY 404

Query: 447 SWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQG 506
           + L+DG     + +    LL E  + G   +V  Y ALI  + K    + A+ LF+ M  
Sbjct: 405 NTLIDGQSKFGSLKQAKLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSA 464

Query: 507 NGILGDSVIYTSLAYAYWRAG 527
            G   D + Y ++  A+ +AG
Sbjct: 465 KGCFPDIITYNTVLSAFSKAG 485



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 111/379 (29%), Positives = 188/379 (49%), Gaps = 17/379 (4%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKM--VQLGVVANIHLYNV 205
           D  QVF  M     +P     +++L++L++    D V +V + M  ++ G V  ++ +N 
Sbjct: 240 DAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNA 299

Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
            I A C+S      + +L  M       +L +YN +I   CK G   +A  +  +M   G
Sbjct: 300 FIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSG 359

Query: 266 I-SPDIVTYNSLIHGFCREGRMREARRLFRDIKG---ATPNHVTYTTLIDGYCRANDLEE 321
              PD++ +N+LI GFC+ GR+ +A +L  ++K      P+ VTY TLIDG  +   L++
Sbjct: 360 CCKPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQ 419

Query: 322 ALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
           A  L + M A G  P VVTY +++    K G   +A  L +EM+ K   PD +T NT+++
Sbjct: 420 AKLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTVLS 479

Query: 382 AYCKIGDTASA----MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA 437
           A+ K G  + A     ++KN+   +    D  TY+ LI G+C+A++ +    LL  M   
Sbjct: 480 AFSKAGMMSKAEGVYQQLKNKT--SYCSPDAITYRILIDGYCRAEDTEQGLTLLQEMTAR 537

Query: 438 GFSPSYCSYSWLVDGYCNKNNEEALLKLL---DEFVSRGLCVDVSVYRALIRRFCKKEKV 494
           G+S    +Y+ L+        EE   K L    + + +      S++ +L+R F +   V
Sbjct: 538 GWSCDSYTYNVLIAKL--AETEEVPSKALAVYQQMLDQDCVPSASIFNSLVRLFLRTGDV 595

Query: 495 DYAQRLFNLMQGNGILGDS 513
           + A+ +   M   G L D+
Sbjct: 596 NSARSMVQEMNEKGHLVDA 614



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 88/295 (29%), Positives = 143/295 (48%), Gaps = 42/295 (14%)

Query: 162 MPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVV-ANIHLYNVLIHACCKSSDVDKVE 220
           +P+L +   +++ L K    D  WK+ +KM+  G    ++  +N LI   CK+  + +  
Sbjct: 326 LPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAH 385

Query: 221 KLLCEMEFKDV-RADLFTYNTLI--------------------------------AL--- 244
           +LL EM+ K++   D+ TYNTLI                                AL   
Sbjct: 386 QLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQAKLLLQEMQAVGCKPNVVTYAALING 445

Query: 245 YCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGAT---- 300
           Y K GM+ EA ++ D M  +G  PDI+TYN+++  F + G M +A  +++ +K  T    
Sbjct: 446 YAKHGMYEEAESLFDEMSAKGCFPDIITYNTVLSAFSKAGMMSKAEGVYQQLKNKTSYCS 505

Query: 301 PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRD-ANR 359
           P+ +TY  LIDGYCRA D E+ L L + M A+G      TYN ++ KL +   +   A  
Sbjct: 506 PDAITYRILIDGYCRAEDTEQGLTLLQEMTARGWSCDSYTYNVLIAKLAETEEVPSKALA 565

Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKAL 414
           +  +M ++   P     N+L+  + + GD  SA  +   M E G ++D    +AL
Sbjct: 566 VYQQMLDQDCVPSASIFNSLVRLFLRTGDVNSARSMVQEMNEKGHLVDASNLEAL 620



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 81/266 (30%), Positives = 129/266 (48%), Gaps = 4/266 (1%)

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           MAA G    VVTY +++  LCK G +  A  LL +M +   AP+ VT   LI+  CK   
Sbjct: 1   MAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARR 60

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
              A++   RML +G   D  TY +LIHG C A  MD A  +L  ++  GF+P++ +YS 
Sbjct: 61  PHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYST 120

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK--EKVDYAQRLFNLMQG 506
           LV   C +   +    L+ E + RG   ++ VY   I  FC+   +   Y  R  + M  
Sbjct: 121 LVIWNCRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMIE 180

Query: 507 NGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
           +G + D V Y +      +AG+     ++L++M R  +   +  + S  +   K N I D
Sbjct: 181 SGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDD 240

Query: 567 LF--WSHVVDRGLMSKHIFKEMQLRN 590
            F  +  +++RG +   +   + L N
Sbjct: 241 AFQVFKGMLERGCVPDSLTYSIMLDN 266



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/164 (26%), Positives = 77/164 (46%), Gaps = 3/164 (1%)

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           L+  YA   M ++   +FD+M      P +     +L++ +K  +      VY+++    
Sbjct: 442 LINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTVLSAFSKAGMMSKAEGVYQQLKNKT 501

Query: 196 --VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIA-LYCKKGMHY 252
                +   Y +LI   C++ D ++   LL EM  +    D +TYN LIA L   + +  
Sbjct: 502 SYCSPDAITYRILIDGYCRAEDTEQGLTLLQEMTARGWSCDSYTYNVLIAKLAETEEVPS 561

Query: 253 EALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI 296
           +ALAV  +M  +   P    +NSL+  F R G +  AR + +++
Sbjct: 562 KALAVYQQMLDQDCVPSASIFNSLVRLFLRTGDVNSARSMVQEM 605


>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g04760, chloroplastic; Flags: Precursor
 gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
 gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
 gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
 gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 602

 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 110/418 (26%), Positives = 192/418 (45%), Gaps = 4/418 (0%)

Query: 128 GNSHVLSWLVIFYANLKMTQ--DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVW 185
           G   V ++  +     KM +  D  +V D+MR  +  P      +++ SL      D+  
Sbjct: 154 GQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL 213

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
           KV  +++       +  Y +LI A      VD+  KL+ EM  + ++ D+FTYNT+I   
Sbjct: 214 KVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGM 273

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNH 303
           CK+GM   A  +   +E +G  PD+++YN L+     +G+  E  +L   +  +   PN 
Sbjct: 274 CKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNV 333

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
           VTY+ LI   CR   +EEA+ L ++M  KG+ P   +Y+ ++   C+EGR+  A   L  
Sbjct: 334 VTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLET 393

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
           M      PD V  NT++   CK G    A+++  ++ E G   +  +Y  +      + +
Sbjct: 394 MISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGD 453

Query: 424 MDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRA 483
              A  ++  M+  G  P   +Y+ ++   C +   +   +LL +  S      V  Y  
Sbjct: 454 KIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNI 513

Query: 484 LIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
           ++  FCK  +++ A  +   M GNG   +   YT L      AG      ++ +D+ R
Sbjct: 514 VLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVR 571



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 107/394 (27%), Positives = 178/394 (45%), Gaps = 3/394 (0%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           + L + + M      P +  CT L+      R      +V + + + G   ++  YN LI
Sbjct: 107 ESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQ-PDVFAYNALI 165

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           +  CK + +D   ++L  M  KD   D  TYN +I   C +G    AL V +++  +   
Sbjct: 166 NGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQ 225

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
           P ++TY  LI     EG + EA +L  ++  +G  P+  TY T+I G C+   ++ A  +
Sbjct: 226 PTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEM 285

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
              +  KG  P V++YN +LR L  +G+  +  +L+ +M  +K  P+ VT + LI   C+
Sbjct: 286 VRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCR 345

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            G    AM +   M E GL  D ++Y  LI  FC+   +D+A E L  M+  G  P   +
Sbjct: 346 DGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVN 405

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+ ++   C     +  L++  +    G   + S Y  +            A  +   M 
Sbjct: 406 YNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMM 465

Query: 506 GNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
            NGI  D + Y S+     R G      ++L DM
Sbjct: 466 SNGIDPDEITYNSMISCLCREGMVDEAFELLVDM 499



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 95/327 (29%), Positives = 159/327 (48%), Gaps = 4/327 (1%)

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI-KGATPNHV 304
           C+ G + E+L + + M R+G +PD++    LI GF     + +A R+   + K   P+  
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDVF 159

Query: 305 TYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM 364
            Y  LI+G+C+ N +++A R+ + M +K   P  VTYN ++  LC  G++  A ++LN++
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQL 219

Query: 365 NEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEM 424
                 P  +T   LI A    G    A+K+ + ML  GL  D FTY  +I G CK   +
Sbjct: 220 LSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMV 279

Query: 425 DIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRAL 484
           D A E++  +   G  P   SY+ L+    N+   E   KL+ +  S     +V  Y  L
Sbjct: 280 DRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSIL 339

Query: 485 IRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL 544
           I   C+  K++ A  L  LM+  G+  D+  Y  L  A+ R G      + L+ M     
Sbjct: 340 ITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGC 399

Query: 545 MITLKIYRSFSASYAKD---NEILDLF 568
           +  +  Y +  A+  K+   ++ L++F
Sbjct: 400 LPDIVNYNTVLATLCKNGKADQALEIF 426



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 105/257 (40%), Gaps = 38/257 (14%)

Query: 344 ILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAG 403
           I  + C+ G   ++  LL  M  K   PD + C  LI  +  + +   A++V   +LE  
Sbjct: 95  IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKF 153

Query: 404 LMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNN----- 458
              D F Y ALI+GFCK   +D A  +L  M    FSP   +Y+ ++   C++       
Sbjct: 154 GQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL 213

Query: 459 -------------------------------EEALLKLLDEFVSRGLCVDVSVYRALIRR 487
                                          +EA LKL+DE +SRGL  D+  Y  +IR 
Sbjct: 214 KVLNQLLSDNCQPTVITYTILIEATMLEGGVDEA-LKLMDEMLSRGLKPDMFTYNTIIRG 272

Query: 488 FCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMIT 547
            CK+  VD A  +   ++  G   D + Y  L  A    G+ +    ++  M+  +    
Sbjct: 273 MCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPN 332

Query: 548 LKIYRSFSASYAKDNEI 564
           +  Y     +  +D +I
Sbjct: 333 VVTYSILITTLCRDGKI 349


>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
          Length = 668

 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 107/351 (30%), Positives = 173/351 (49%), Gaps = 5/351 (1%)

Query: 194 LGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYE 253
           + V  + + Y  LI   C    V     LL +M  +  + ++ TY  L+   CK     +
Sbjct: 136 MPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQ 195

Query: 254 ALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLID 311
           A+AV D M  +G +P+IVTYN +I+G CREGR+ +AR L   +   G  P+ V+YTTL+ 
Sbjct: 196 AMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLK 255

Query: 312 GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAP 371
           G C +   ++   L   M  K   P  VT++ ++R  C+ G +  A ++L +M E + A 
Sbjct: 256 GLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECAT 315

Query: 372 DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
           +   CN +IN+ CK G    A K  N M   G   D  +Y  ++ G C+A+  + AKELL
Sbjct: 316 NTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELL 375

Query: 432 FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
             M+     P+  +++  +   C K   E  + L+++    G  V V  Y AL+  FC +
Sbjct: 376 KEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQ 435

Query: 492 EKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRR 542
             +D A  LF  M       +++ YT+L      A    A ++++ +M  R
Sbjct: 436 GHIDSALELFRSMPCK---PNTITYTTLLTGLCNAERLDAAAELVAEMLHR 483



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 103/387 (26%), Positives = 190/387 (49%), Gaps = 1/387 (0%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N      L+ F+    M +  +QV  QM  H    +   C +++NS+ K    D  +K  
Sbjct: 281 NEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFL 340

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
             M   G   +   Y  ++   C++   +  ++LL EM   +   +  T+NT I + C+K
Sbjct: 341 NNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQK 400

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYTT 308
           G+  +A+ + ++M+  G +  +VTYN+L++GFC +G +  A  LFR +    PN +TYTT
Sbjct: 401 GLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMP-CKPNTITYTT 459

Query: 309 LIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKK 368
           L+ G C A  L+ A  L   M  +   P VVT+N ++   C++G + +A  L+ +M E  
Sbjct: 460 LLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHG 519

Query: 369 IAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAK 428
             P+ +T NTL +   K   +  A+++ + ++  G+  D  T+ ++I    K   ++ A 
Sbjct: 520 CTPNLITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAI 579

Query: 429 ELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRF 488
           ++     D G  P    Y+ ++ G C ++  +  +  L   VS G   + S Y  LI   
Sbjct: 580 QMFHLAQDIGMRPKALVYNKILLGLCKRHEIDNAIDFLAYMVSNGCMPNESTYIILIEGL 639

Query: 489 CKKEKVDYAQRLFNLMQGNGILGDSVI 515
            ++  +  AQ L +++   G++  ++I
Sbjct: 640 AREGLLKEAQDLLSMLCSRGVVSKNLI 666



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 135/535 (25%), Positives = 227/535 (42%), Gaps = 81/535 (15%)

Query: 126 PDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVW 185
           PD  ++  + L+    +     D L + D M      P++   TVLL ++ K+   +   
Sbjct: 140 PD--AYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAM 197

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDV----------------------------- 216
            V  +M   G   NI  YNV+I+  C+   V                             
Sbjct: 198 AVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGL 257

Query: 217 ------DKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRM-ERE----- 264
                 D VE+L  EM  K+   +  T++ LI  +C+ GM   A+ V  +M E E     
Sbjct: 258 CASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNT 317

Query: 265 -----------------------------GISPDIVTYNSLIHGFCREGRMREARRLFRD 295
                                        G +PD ++Y +++ G CR  R  +A+ L ++
Sbjct: 318 TLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKE 377

Query: 296 I--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGR 353
           +      PN VT+ T I   C+   +E+A+ L E M   G   GVVTYN+++   C +G 
Sbjct: 378 MVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGH 437

Query: 354 IRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKA 413
           I  A  L   M  K   P+ +T  TL+   C      +A ++   ML      +  T+  
Sbjct: 438 IDSALELFRSMPCK---PNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNV 494

Query: 414 LIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
           L++ FC+   +D A EL+  M++ G +P+  +Y+ L DG     + E  L+LL   VS+G
Sbjct: 495 LVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKG 554

Query: 474 LCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACS 533
           +  DV  + ++I    K+++V+ A ++F+L Q  G+   +++Y  +     +  E     
Sbjct: 555 VSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKILLGLCKRHEIDNAI 614

Query: 534 DILDDMYRRRLMITLKIYRSFSASYAKDN---EILDLFWSHVVDRGLMSKHIFKE 585
           D L  M     M     Y       A++    E  DL  S +  RG++SK++ +E
Sbjct: 615 DFLAYMVSNGCMPNESTYIILIEGLAREGLLKEAQDLL-SMLCSRGVVSKNLIEE 668



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 120/490 (24%), Positives = 219/490 (44%), Gaps = 27/490 (5%)

Query: 75  KHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVL--NALV-------KIHDD 125
           + ++ ++  ++  + KN  F+ A  +L++  +R    TP+++  N ++       ++ D 
Sbjct: 174 QPNVVTYTVLLEAMCKNSGFEQAMAVLDE--MRAKGCTPNIVTYNVIINGMCREGRVDDA 231

Query: 126 PDGNSHVLSWL----VIFYANL-------KMTQDGLQVFDQMRVHNLMPHLHACTVLLNS 174
            D  + + S+      + Y  L       K   D  ++F +M   N MP+     +L+  
Sbjct: 232 RDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRF 291

Query: 175 LAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRAD 234
             +  + +   +V ++M +     N  L N++I++ CK   VD   K L  M       D
Sbjct: 292 FCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPD 351

Query: 235 LFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR 294
             +Y T++   C+     +A  +   M R    P+ VT+N+ I   C++G + +A  L  
Sbjct: 352 TISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIE 411

Query: 295 DIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEG 352
            ++  G T   VTY  L++G+C    ++ AL L   M  K   P  +TY ++L  LC   
Sbjct: 412 QMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCK---PNTITYTTLLTGLCNAE 468

Query: 353 RIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYK 412
           R+  A  L+ EM  +   P+ VT N L+N +C+ G    A+++  +M+E G   +  TY 
Sbjct: 469 RLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYN 528

Query: 413 ALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSR 472
            L  G  K    + A ELL G++  G SP   ++S ++     ++  E  +++       
Sbjct: 529 TLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDI 588

Query: 473 GLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKAC 532
           G+     VY  ++   CK+ ++D A      M  NG + +   Y  L     R G  K  
Sbjct: 589 GMRPKALVYNKILLGLCKRHEIDNAIDFLAYMVSNGCMPNESTYIILIEGLAREGLLKEA 648

Query: 533 SDILDDMYRR 542
            D+L  +  R
Sbjct: 649 QDLLSMLCSR 658



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 91/308 (29%), Positives = 145/308 (47%), Gaps = 1/308 (0%)

Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
           D++    LI   C++G   +A  V    E  G   D+  YN+L+ G+CR G +  ARRL 
Sbjct: 74  DVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLI 133

Query: 294 RDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGR 353
             +  A P+  TYT LI   C    + +AL L + M  +G  P VVTY  +L  +CK   
Sbjct: 134 GSMPVA-PDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSG 192

Query: 354 IRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKA 413
              A  +L+EM  K   P+ VT N +IN  C+ G    A  + NR+   G   D  +Y  
Sbjct: 193 FEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTT 252

Query: 414 LIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
           L+ G C +K  D  +EL   M++    P+  ++  L+  +C     E  +++L +     
Sbjct: 253 LLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHE 312

Query: 474 LCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACS 533
              + ++   +I   CK+ +VD A +  N M   G   D++ YT++     RA       
Sbjct: 313 CATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAK 372

Query: 534 DILDDMYR 541
           ++L +M R
Sbjct: 373 ELLKEMVR 380



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 79/320 (24%), Positives = 124/320 (38%), Gaps = 6/320 (1%)

Query: 251 HYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREAR--RLFRDIKGATPNHVTYTT 308
           H+ A A   R E   ++P+  +   L     RE     AR   L     G  P+    T 
Sbjct: 22  HHLAAAAATRPESPNVAPNPASAR-LRRLIAREDLAGAARLVELSASRDGEAPDVYLCTK 80

Query: 309 LIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKK 368
           LI   CR     +A R+       G    V  YN+++   C+ G +  A RL+  M    
Sbjct: 81  LIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLIGSM---P 137

Query: 369 IAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAK 428
           +APD  T   LI   C  G  A A+ + + ML  G   +  TY  L+   CK    + A 
Sbjct: 138 VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAM 197

Query: 429 ELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRF 488
            +L  M   G +P+  +Y+ +++G C +   +    LL+   S G   D   Y  L++  
Sbjct: 198 AVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGL 257

Query: 489 CKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITL 548
           C  ++ D  + LF  M     + + V +  L   + R G  +    +L  M         
Sbjct: 258 CASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNT 317

Query: 549 KIYRSFSASYAKDNEILDLF 568
            +      S  K   + D F
Sbjct: 318 TLCNIVINSICKQGRVDDAF 337


>gi|224138176|ref|XP_002326537.1| predicted protein [Populus trichocarpa]
 gi|222833859|gb|EEE72336.1| predicted protein [Populus trichocarpa]
          Length = 826

 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 146/603 (24%), Positives = 251/603 (41%), Gaps = 97/603 (16%)

Query: 25  HWAKLLNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQ--SHW 82
           HW K L    +     T +  +   +++    P L    F+WA S   ++   L   S  
Sbjct: 47  HWEKSLETRFSDC--ETPVSGIAHFVFDRIRDPGLGLKLFEWA-SKRSDFNDLLDGFSCS 103

Query: 83  TMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFY-- 140
           +++ +L + + F   +N+LE +  +D   T   L+ +V  + D    +  L    I Y  
Sbjct: 104 SLLKLLARCRVFVEVENLLETMKCKDLAPTREALSFVVGAYVDSGLVNRALELYHIAYDI 163

Query: 141 -----------------ANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDR---- 179
                               K  +   +V+++M   +     ++  +++  L K+R    
Sbjct: 164 HNYLPDVIACNALLNALIQQKKVEIARKVYEEMVKRDGCWDNYSVCIMVRGLCKERKVEE 223

Query: 180 ----------------------LTDMVWK---------VYKKMVQLGVVANIHLYNVLIH 208
                                 L D  WK         ++K++   G +     Y ++I+
Sbjct: 224 GRKLINDRWGKGCIPNIVFYNTLVDGYWKRGDVERANGLFKELKMKGFLPTTETYGIMIN 283

Query: 209 ACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISP 268
             CK  +   V+ LL EM+ + V  ++  YN+++    K G   E       +   G  P
Sbjct: 284 GLCKKCNFKAVDGLLVEMKERGVDVNVQVYNSIVDAQIKHGCKIEVGKTLRWITENGCEP 343

Query: 269 DIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCR----------- 315
           DI TYN+LI G CR+G++ EA  L      +G +PN ++YT LI  YC+           
Sbjct: 344 DITTYNTLISGSCRDGKVHEAEELLEHAIKRGLSPNKLSYTPLIHVYCKQGKCLRAFDLF 403

Query: 316 ------------------------ANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
                                   A +++ AL +R+ M  +GV P    YN ++  LCK+
Sbjct: 404 IGMTEKGHPLDLVAYGALVHGLVAAGEVDVALTVRDKMVERGVLPDANVYNVLMNGLCKK 463

Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
           GR+  A  LL EM  + ++ D     TL++ + + G    A K+    +  G+      Y
Sbjct: 464 GRLSAAKLLLVEMLHQNLSLDAFVSATLVDGFIRHGKLDEAKKLFELTIAKGMDPGVVGY 523

Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
            A+I G+CK   M+ A   +  M D   SP   +YS ++DGY  +N+    LKL  + V 
Sbjct: 524 NAMIKGYCKFGMMNDALTCVQRMKDGDHSPDEFTYSTIIDGYVKQNDLHNALKLFGQMVK 583

Query: 472 RGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE-PK 530
           +    +V  Y +LI  FC+      A++ F  M+ +G+  + V YT L   + + G+  K
Sbjct: 584 QKCKPNVVTYTSLINGFCRTGDSSRAEKTFEEMRSSGLKPNVVTYTILIGCFCKEGKISK 643

Query: 531 ACS 533
           ACS
Sbjct: 644 ACS 646



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 132/519 (25%), Positives = 225/519 (43%), Gaps = 74/519 (14%)

Query: 66  WAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKI--- 122
           + E  +  +  + +++  MI+ L K  +FK+   +L ++  R       V N++V     
Sbjct: 263 FKELKMKGFLPTTETYGIMINGLCKKCNFKAVDGLLVEMKERGVDVNVQVYNSIVDAQIK 322

Query: 123 HDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTD 182
           H         L W+         T++G +           P +     L++   +D    
Sbjct: 323 HGCKIEVGKTLRWI---------TENGCE-----------PDITTYNTLISGSCRDGKVH 362

Query: 183 MVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLI 242
              ++ +  ++ G+  N   Y  LIH  CK     +   L   M  K    DL  Y  L+
Sbjct: 363 EAEELLEHAIKRGLSPNKLSYTPLIHVYCKQGKCLRAFDLFIGMTEKGHPLDLVAYGALV 422

Query: 243 ALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGAT 300
                 G    AL V+D+M   G+ PD   YN L++G C++GR+  A+ L  ++  +  +
Sbjct: 423 HGLVAAGEVDVALTVRDKMVERGVLPDANVYNVLMNGLCKKGRLSAAKLLLVEMLHQNLS 482

Query: 301 PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEG-------- 352
            +     TL+DG+ R   L+EA +L E+  AKG+ PGVV YN++++  CK G        
Sbjct: 483 LDAFVSATLVDGFIRHGKLDEAKKLFELTIAKGMDPGVVGYNAMIKGYCKFGMMNDALTC 542

Query: 353 --RIRDAN-------------------------RLLNEMNEKKIAPDNVTCNTLINAYCK 385
             R++D +                         +L  +M ++K  P+ VT  +LIN +C+
Sbjct: 543 VQRMKDGDHSPDEFTYSTIIDGYVKQNDLHNALKLFGQMVKQKCKPNVVTYTSLINGFCR 602

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            GD++ A K    M  +GL  +  TY  LI  FCK  ++  A      ML     P+  +
Sbjct: 603 TGDSSRAEKTFEEMRSSGLKPNVVTYTILIGCFCKEGKISKACSFFELMLLNRCIPNDVT 662

Query: 446 YSWLVDG--------YCNKNNEEALLK---LLDEF---VSRGLCVDVSVYRALIRRFCKK 491
           +++L++G          NK NE   +K   ++D F   +S G    V+ Y +++   C  
Sbjct: 663 FNYLINGLTNNLATAVSNKANESLEIKASLMMDFFRTMISDGWEQRVAAYNSVLICLCHH 722

Query: 492 EKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPK 530
           + V+ A +L + M G GI  D V + +L Y     G  K
Sbjct: 723 KMVNAALQLRDKMTGKGIFPDPVSFAALVYGLCLEGRSK 761



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 102/382 (26%), Positives = 174/382 (45%), Gaps = 5/382 (1%)

Query: 167 ACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLL-CE 225
           +C+ LL  LA+ R+   V  + + M    +       + ++ A   S  V++  +L    
Sbjct: 101 SCSSLLKLLARCRVFVEVENLLETMKCKDLAPTREALSFVVGAYVDSGLVNRALELYHIA 160

Query: 226 MEFKDVRADLFTYNTLI-ALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREG 284
            +  +   D+   N L+ AL  +K +       ++ ++R+G   D  +   ++ G C+E 
Sbjct: 161 YDIHNYLPDVIACNALLNALIQQKKVEIARKVYEEMVKRDGCW-DNYSVCIMVRGLCKER 219

Query: 285 RMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYN 342
           ++ E R+L  D   KG  PN V Y TL+DGY +  D+E A  L + +  KG  P   TY 
Sbjct: 220 KVEEGRKLINDRWGKGCIPNIVFYNTLVDGYWKRGDVERANGLFKELKMKGFLPTTETYG 279

Query: 343 SILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEA 402
            ++  LCK+   +  + LL EM E+ +  +    N++++A  K G      K    + E 
Sbjct: 280 IMINGLCKKCNFKAVDGLLVEMKERGVDVNVQVYNSIVDAQIKHGCKIEVGKTLRWITEN 339

Query: 403 GLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEAL 462
           G   D  TY  LI G C+  ++  A+ELL   +  G SP+  SY+ L+  YC +      
Sbjct: 340 GCEPDITTYNTLISGSCRDGKVHEAEELLEHAIKRGLSPNKLSYTPLIHVYCKQGKCLRA 399

Query: 463 LKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYA 522
             L      +G  +D+  Y AL+       +VD A  + + M   G+L D+ +Y  L   
Sbjct: 400 FDLFIGMTEKGHPLDLVAYGALVHGLVAAGEVDVALTVRDKMVERGVLPDANVYNVLMNG 459

Query: 523 YWRAGEPKACSDILDDMYRRRL 544
             + G   A   +L +M  + L
Sbjct: 460 LCKKGRLSAAKLLLVEMLHQNL 481



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 68/280 (24%), Positives = 126/280 (45%), Gaps = 18/280 (6%)

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
           Y    M  D L    +M+  +  P     + +++   K        K++ +MV+     N
Sbjct: 530 YCKFGMMNDALTCVQRMKDGDHSPDEFTYSTIIDGYVKQNDLHNALKLFGQMVKQKCKPN 589

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
           +  Y  LI+  C++ D  + EK   EM    ++ ++ TY  LI  +CK+G   +A +  +
Sbjct: 590 VVTYTSLINGFCRTGDSSRAEKTFEEMRSSGLKPNVVTYTILIGCFCKEGKISKACSFFE 649

Query: 260 RMEREGISPDIVTYNSLIHGFCR------EGRMREARRL--------FRDI--KGATPNH 303
            M      P+ VT+N LI+G           +  E+  +        FR +   G     
Sbjct: 650 LMLLNRCIPNDVTFNYLINGLTNNLATAVSNKANESLEIKASLMMDFFRTMISDGWEQRV 709

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRD-ANRLLN 362
             Y +++   C    +  AL+LR+ M  KG++P  V++ +++  LC EGR ++  N +  
Sbjct: 710 AAYNSVLICLCHHKMVNAALQLRDKMTGKGIFPDPVSFAALVYGLCLEGRSKEWKNTISC 769

Query: 363 EMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEA 402
           ++NE ++    V  +  +N +   G T+ A KV + +LE 
Sbjct: 770 KLNEWELQI-AVKYSQKLNPFLPKGLTSEASKVFHTLLEG 808


>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
 gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
          Length = 465

 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 125/444 (28%), Positives = 205/444 (46%), Gaps = 45/444 (10%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           NS   + LV  ++      D  ++ + M   ++ P++ +   LL  L K        ++ 
Sbjct: 9   NSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWHEAEELV 68

Query: 189 KKMVQLG--VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYC 246
           + M+  G     ++  Y+ L+   CK+  V++  +LL E+  + +R D   Y  ++A  C
Sbjct: 69  RDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVASLC 128

Query: 247 KKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHV 304
           K     EAL + + M R G  P ++T+N+LI G CRE  +  A  L + +   G   + V
Sbjct: 129 KSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVV 188

Query: 305 TYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM 364
           TY TL+DG C+A  L+EA +L E M A G  P VV Y+S +  LCK G++ DA+++L +M
Sbjct: 189 TYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQM 248

Query: 365 NEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEA-GLMLDQFTYKALIHGFCKAKE 423
            +    P+ VT NT+++  CK G   +A+++  +M  + G  L+   Y  ++ G CK   
Sbjct: 249 RDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGR 308

Query: 424 MDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSR----------- 472
              A+ ++  M  AG  P   +YS LV+G C     E  ++ + E               
Sbjct: 309 TQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCS 368

Query: 473 ---GLC--------------------------VDVSVYRALIRRFCKKEKVDYAQRLFNL 503
              GLC                            VS Y ALI   CK  ++D A + F  
Sbjct: 369 LVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQR 428

Query: 504 MQGNGILGDSVIYTSLAYAYWRAG 527
           M+  G   D V Y+++     R+G
Sbjct: 429 MRSQGCDPDGVSYSTIVEGLARSG 452



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 112/441 (25%), Positives = 210/441 (47%), Gaps = 23/441 (5%)

Query: 70  AVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGN 129
           A  + + ++ S+  ++  L K + +  A+ ++  +  R   STP ++             
Sbjct: 37  AARDIQPNVVSYNGLLEGLCKLERWHEAEELVRDMISRGGRSTPDMVT------------ 84

Query: 130 SHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYK 189
               S L+  Y      ++  ++  ++    L P     T ++ SL K        ++ +
Sbjct: 85  ---YSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVASLCKSARLGEALELLE 141

Query: 190 KMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKG 249
           +M++ G    +  +N LI  CC+  +++  + LL +M    V+AD+ TYNTL+   CK G
Sbjct: 142 EMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAG 201

Query: 250 MHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGA--TPNHVTYT 307
              EA  + +RM+  G +PD+V Y+S ++G C+ G++ +A ++   ++ +   PN VTY 
Sbjct: 202 RLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYN 261

Query: 308 TLIDGYCRANDLEEALRLREVMAAK-GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
           T++DG C++  ++ AL + E MA+  G    VV Y++++  LCK GR ++A  ++  M  
Sbjct: 262 TILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMAR 321

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
               PD VT ++L+N  CK G    A++    M   G   +  TY +L+HG C    +  
Sbjct: 322 AGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAE 381

Query: 427 AKELLFGMLDAGF-----SPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVY 481
           A+ ++  M   G       PS  +Y+ L+ G C     +  LK      S+G   D   Y
Sbjct: 382 AERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSY 441

Query: 482 RALIRRFCKKEKVDYAQRLFN 502
             ++    +  +   A+ + +
Sbjct: 442 STIVEGLARSGRALQAEMILS 462



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 110/389 (28%), Positives = 181/389 (46%), Gaps = 40/389 (10%)

Query: 191 MVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGM 250
           M + G   N   +N L++   K       E+LL  M  +D++ ++ +YN L+   CK   
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60

Query: 251 HYEALA-VQDRMEREGIS-PDIVTYNSLIHGFCREGRMREARRLFRDI------------ 296
            +EA   V+D + R G S PD+VTY++L+ G+C+ G++ E+R L +++            
Sbjct: 61  WHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 297 -------------------------KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAA 331
                                     G  P  +T+ TLI G CR  +LE A  L + MAA
Sbjct: 121 TKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAA 180

Query: 332 KGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTAS 391
            GV   VVTYN+++  LCK GR+++A +LL  M     APD V  ++ +   CK G    
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLD 240

Query: 392 AMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA-GFSPSYCSYSWLV 450
           A +V  +M ++    +  TY  ++ G CK+ ++D A E++  M  + G   +   YS +V
Sbjct: 241 AHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVV 300

Query: 451 DGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGIL 510
           DG C     +    +++     G   DV  Y +L+   CK  K++ A      M   G  
Sbjct: 301 DGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCK 360

Query: 511 GDSVIYTSLAYAYWRAGEPKACSDILDDM 539
            ++V Y SL +     G       ++++M
Sbjct: 361 PNAVTYCSLVHGLCSCGRLAEAERMVEEM 389



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 84/325 (25%), Positives = 146/325 (44%), Gaps = 29/325 (8%)

Query: 50  LYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDF 109
           +  CC   +L  A     + A    K  + ++ T++  L K    + A+ +LE++     
Sbjct: 159 ISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGC 218

Query: 110 LSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQ--DGLQVFDQMRVHNLMPHLHA 167
                           PD    V+++    Y   K  +  D  QV +QMR  +  P++  
Sbjct: 219 A---------------PD----VVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVT 259

Query: 168 CTVLLNSLAKDRLTDMVWKVYKKMVQL-GVVANIHLYNVLIHACCKSSDVDKVEKLLCEM 226
              +L+ L K    D   ++ ++M    G   N+  Y+ ++   CK     +   ++  M
Sbjct: 260 YNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAM 319

Query: 227 EFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRM 286
                R D+ TY++L+   CK G   EA+     M  EG  P+ VTY SL+HG C  GR+
Sbjct: 320 ARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRL 379

Query: 287 REARRLFRDIKG-------ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVV 339
            EA R+  ++           P+  TY  LI G C+A  +++AL+  + M ++G  P  V
Sbjct: 380 AEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGV 439

Query: 340 TYNSILRKLCKEGRIRDANRLLNEM 364
           +Y++I+  L + GR   A  +L+E+
Sbjct: 440 SYSTIVEGLARSGRALQAEMILSEV 464



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 67/240 (27%), Positives = 111/240 (46%), Gaps = 2/240 (0%)

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M   G  P  VT+N+++    K+GR  D  RLL  M  + I P+ V+ N L+   CK+  
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60

Query: 389 TASAMKVKNRMLEAG--LMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSY 446
              A ++   M+  G     D  TY  L+ G+CKA +++ ++ELL  ++  G  P    Y
Sbjct: 61  WHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 447 SWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQG 506
           + +V   C        L+LL+E +  G C  +  +  LI   C+++ ++ A  L   M  
Sbjct: 121 TKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAA 180

Query: 507 NGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
           +G+  D V Y +L     +AG  +    +L+ M        +  Y SF     K  ++LD
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLD 240



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/223 (25%), Positives = 95/223 (42%), Gaps = 21/223 (9%)

Query: 80  SHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIF 139
           ++ T++  L K+    +A  M+E++A  D       LN +        G S V+  L   
Sbjct: 259 TYNTILDGLCKSGKIDTALEMMEQMASSDGCG----LNVV--------GYSTVVDGLC-- 304

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
              L  TQ+   V + M      P +   + L+N L K    +   +  ++M   G   N
Sbjct: 305 --KLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPN 362

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVR-----ADLFTYNTLIALYCKKGMHYEA 254
              Y  L+H  C    + + E+++ EM             + TYN LI   CK G   +A
Sbjct: 363 AVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDA 422

Query: 255 LAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK 297
           L    RM  +G  PD V+Y++++ G  R GR  +A  +  +++
Sbjct: 423 LKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQAEMILSEVR 465


>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Cucumis sativus]
          Length = 904

 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 123/468 (26%), Positives = 217/468 (46%), Gaps = 21/468 (4%)

Query: 63  FFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKI 122
           +F+WAE  + +  H  +++ +++ ++ + + F   + +LE++++  F             
Sbjct: 116 YFRWAER-LTDRAHCREAYNSLLMVMARTRKFNCLEQILEEMSIAGF------------- 161

Query: 123 HDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTD 182
              P  N+ +   +V+ +   +  ++       MR     P   A T L+ +L+  R +D
Sbjct: 162 --GPSNNTCI--EIVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSD 217

Query: 183 MVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLI 242
            +  ++++M +LG   N+HL+  LI    +   VD    LL EM+   +  D+  YN  I
Sbjct: 218 CMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCI 277

Query: 243 ALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR--DIKGAT 300
             + K G    A      M+  G+  D VTY S+I   C+  R+ EA  LF   D     
Sbjct: 278 DCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQV 337

Query: 301 PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRL 360
           P    Y T+I GY  A   E+A  L E    KG  P VV+YN IL  L ++G++ +A + 
Sbjct: 338 PCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKK 397

Query: 361 LNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCK 420
             EM +  I P+  T N +I+  CK G   +A+ V++ M +AGL  +  T   ++   CK
Sbjct: 398 FEEMKKDAI-PNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCK 456

Query: 421 AKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSV 480
           A+ +D A  +  G+      P   +Y  L++G       +   KL ++ +      +  V
Sbjct: 457 AQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVV 516

Query: 481 YRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
           Y +LIR F K  + +   +++N M   G   D ++  +     ++AGE
Sbjct: 517 YTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGE 564



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 118/433 (27%), Positives = 200/433 (46%), Gaps = 1/433 (0%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N H+ + L+  +A        L + D+M+ ++L P +    V ++   K    DM WK +
Sbjct: 234 NVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFF 293

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
            +M   G+V +   Y  +I   CK+  +++  +L   M+        + YNT+I  Y   
Sbjct: 294 HEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMA 353

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI-KGATPNHVTYT 307
           G   +A ++ +R  R+G  P +V+YN ++    R+G++ EA + F ++ K A PN  TY 
Sbjct: 354 GKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIPNLSTYN 413

Query: 308 TLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEK 367
            +ID  C+A  LE AL +R+ M   G++P V+T N ++ +LCK  R+ DA  +   ++ K
Sbjct: 414 IMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHK 473

Query: 368 KIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIA 427
              PD VT  +LI    + G    A K+  +ML+A  + +   Y +LI  F K    +  
Sbjct: 474 TCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDG 533

Query: 428 KELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRR 487
            ++   ML  G SP     +  +D        E    L  E  + G   D   Y  LI  
Sbjct: 534 HKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHG 593

Query: 488 FCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMIT 547
             K      A  LF  M+  G + D+  Y ++   + ++G+      +L++M  +    T
Sbjct: 594 LVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPT 653

Query: 548 LKIYRSFSASYAK 560
           +  Y S     AK
Sbjct: 654 VVTYGSVIDGLAK 666



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 111/419 (26%), Positives = 200/419 (47%), Gaps = 3/419 (0%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           + +++F+ M  +  +P  +A   ++         +  + + ++  + G + ++  YN ++
Sbjct: 323 EAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCIL 382

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
               +   VD+  K   EM+ KD   +L TYN +I + CK G    AL V+D M+  G+ 
Sbjct: 383 SCLGRKGQVDEALKKFEEMK-KDAIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLF 441

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFR--DIKGATPNHVTYTTLIDGYCRANDLEEALRL 325
           P+++T N ++   C+  R+ +A  +F   D K   P+ VTY +LI+G  R   ++EA +L
Sbjct: 442 PNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKL 501

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
            E M      P  V Y S++R   K GR  D +++ NEM     +PD +  NT ++   K
Sbjct: 502 YEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFK 561

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            G+      +   +   G + D  +Y  LIHG  KA     A EL + M + G      +
Sbjct: 562 AGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRA 621

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+ ++DG+C         +LL+E  ++G    V  Y ++I    K +++D A  LF   +
Sbjct: 622 YNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK 681

Query: 506 GNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
             GI  + VIY+SL   + + G       I++++ ++ L   +  +     +  K  EI
Sbjct: 682 SKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEI 740



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 122/485 (25%), Positives = 204/485 (42%), Gaps = 35/485 (7%)

Query: 63  FFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKI 122
           F +  + A+PN    L ++  MI +L K    ++A  ++ + A++D    P+V+      
Sbjct: 398 FEEMKKDAIPN----LSTYNIMIDMLCKAGKLETA--LVVRDAMKDAGLFPNVI------ 445

Query: 123 HDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTD 182
                     ++ +V      +   D   +F+ +      P       L+  L +    D
Sbjct: 446 ---------TVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVD 496

Query: 183 MVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLI 242
             +K+Y++M+    + N  +Y  LI    K    +   K+  EM       DL   NT +
Sbjct: 497 EAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYM 556

Query: 243 ALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GAT 300
               K G   +  A+   ++  G  PD  +Y  LIHG  + G   EA  LF  +K  G  
Sbjct: 557 DCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCV 616

Query: 301 PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRL 360
            +   Y T+IDG+C++  + +A +L E M  KG  P VVTY S++  L K  R+ +A  L
Sbjct: 617 LDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYML 676

Query: 361 LNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCK 420
             E   K I  + V  ++LI+ + K+G    A  +   +++ GL  + +T+  L+    K
Sbjct: 677 FEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVK 736

Query: 421 AKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSV 480
           A+E+  A      M D   +P+Y +YS L+ G C             E   +G   +V  
Sbjct: 737 AEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFT 796

Query: 481 YRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL------------AYAYWRAGE 528
           Y  +I    K   +  A  LF   +  G + DS IY ++            AY  +    
Sbjct: 797 YTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEAR 856

Query: 529 PKACS 533
            K CS
Sbjct: 857 LKGCS 861



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 97/371 (26%), Positives = 169/371 (45%), Gaps = 2/371 (0%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N+ V + L+  +      +DG +++++M      P L      ++ + K    +    ++
Sbjct: 513 NAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALF 572

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
           +++  LG + +   Y +LIH   K+    +  +L   M+ +    D   YNT+I  +CK 
Sbjct: 573 QEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKS 632

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTY 306
           G   +A  + + M+ +G  P +VTY S+I G  +  R+ EA  LF + K  G   N V Y
Sbjct: 633 GKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIY 692

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
           ++LIDG+ +   ++EA  + E +  KG+ P V T+N +L  L K   I +A      M +
Sbjct: 693 SSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKD 752

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
            K  P+ +T + LI+  CKI     A      M + G   + FTY  +I G  KA  +  
Sbjct: 753 LKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVE 812

Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
           A  L     + G       Y+ +++G  N N      +L +E   +G  +       L+ 
Sbjct: 813 ADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCVVLLD 872

Query: 487 RFCKKEKVDYA 497
              K E ++ A
Sbjct: 873 SLHKAECIEQA 883



 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 54/229 (23%), Positives = 96/229 (41%)

Query: 340 TYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRM 399
            YNS+L  + +  +     ++L EM+     P N TC  ++ ++ K      A      M
Sbjct: 132 AYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTM 191

Query: 400 LEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNE 459
            +         Y  LI     +++ D    L   M + G++ +   ++ L+  +  +   
Sbjct: 192 RKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRV 251

Query: 460 EALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
           +A L LLDE  S  L  DV +Y   I  F K  KVD A + F+ M+ NG++ D V YTS+
Sbjct: 252 DAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSM 311

Query: 520 AYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLF 568
                +A       ++ + M + + +     Y +    Y    +  D +
Sbjct: 312 IGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAY 360



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 55/248 (22%), Positives = 100/248 (40%), Gaps = 3/248 (1%)

Query: 317 NDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTC 376
           N LE+ L   E M+  G  P   T   I+    K  ++R+A   +  M + K  P     
Sbjct: 147 NCLEQIL---EEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAY 203

Query: 377 NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD 436
             LI A     D+   + +  +M E G  ++   +  LI  F +   +D A  LL  M  
Sbjct: 204 TNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKS 263

Query: 437 AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDY 496
               P    Y+  +D +      +   K   E  + GL +D   Y ++I   CK ++++ 
Sbjct: 264 NSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLNE 323

Query: 497 AQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSA 556
           A  LF  M  N  +  +  Y ++   Y  AG+ +    +L+   R+  + ++  Y    +
Sbjct: 324 AVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILS 383

Query: 557 SYAKDNEI 564
              +  ++
Sbjct: 384 CLGRKGQV 391



 Score = 42.7 bits (99), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 28/128 (21%), Positives = 54/128 (42%), Gaps = 17/128 (13%)

Query: 50  LYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDF 109
           ++  C I   + AF  W E     +K ++ ++ TMI  L K  +   A  + EK   +  
Sbjct: 766 IHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGG 825

Query: 110 LSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACT 169
           ++  ++ NA+++                   +N     D  ++F++ R+     +   C 
Sbjct: 826 VADSAIYNAIIE-----------------GLSNANRASDAYRLFEEARLKGCSIYTKTCV 868

Query: 170 VLLNSLAK 177
           VLL+SL K
Sbjct: 869 VLLDSLHK 876


>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g06920-like [Cucumis sativus]
          Length = 904

 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 123/468 (26%), Positives = 217/468 (46%), Gaps = 21/468 (4%)

Query: 63  FFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKI 122
           +F+WAE  + +  H  +++ +++ ++ + + F   + +LE++++  F             
Sbjct: 116 YFRWAER-LTDRAHCREAYNSLLMVMARTRKFNCLEQILEEMSIAGF------------- 161

Query: 123 HDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTD 182
              P  N+ +   +V+ +   +  ++       MR     P   A T L+ +L+  R +D
Sbjct: 162 --GPSNNTCI--EIVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSD 217

Query: 183 MVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLI 242
            +  ++++M +LG   N+HL+  LI    +   VD    LL EM+   +  D+  YN  I
Sbjct: 218 CMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCI 277

Query: 243 ALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR--DIKGAT 300
             + K G    A      M+  G+  D VTY S+I   C+  R+ EA  LF   D     
Sbjct: 278 DCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQV 337

Query: 301 PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRL 360
           P    Y T+I GY  A   E+A  L E    KG  P VV+YN IL  L ++G++ +A + 
Sbjct: 338 PCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKK 397

Query: 361 LNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCK 420
             EM +  I P+  T N +I+  CK G   +A+ V++ M +AGL  +  T   ++   CK
Sbjct: 398 FEEMKKDAI-PNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCK 456

Query: 421 AKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSV 480
           A+ +D A  +  G+      P   +Y  L++G       +   KL ++ +      +  V
Sbjct: 457 AQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVV 516

Query: 481 YRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
           Y +LIR F K  + +   +++N M   G   D ++  +     ++AGE
Sbjct: 517 YTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGE 564



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 118/433 (27%), Positives = 200/433 (46%), Gaps = 1/433 (0%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N H+ + L+  +A        L + D+M+ ++L P +    V ++   K    DM WK +
Sbjct: 234 NVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXF 293

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
            +M   G+V +   Y  +I   CK+  +++  +L   M+        + YNT+I  Y   
Sbjct: 294 HEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMA 353

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI-KGATPNHVTYT 307
           G   +A ++ +R  R+G  P +V+YN ++    R+G++ EA + F ++ K A PN  TY 
Sbjct: 354 GKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIPNLSTYN 413

Query: 308 TLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEK 367
            +ID  C+A  LE AL +R+ M   G++P V+T N ++ +LCK  R+ DA  +   ++ K
Sbjct: 414 IMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHK 473

Query: 368 KIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIA 427
              PD VT  +LI    + G    A K+  +ML+A  + +   Y +LI  F K    +  
Sbjct: 474 TCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDG 533

Query: 428 KELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRR 487
            ++   ML  G SP     +  +D        E    L  E  + G   D   Y  LI  
Sbjct: 534 HKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHG 593

Query: 488 FCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMIT 547
             K      A  LF  M+  G + D+  Y ++   + ++G+      +L++M  +    T
Sbjct: 594 LVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPT 653

Query: 548 LKIYRSFSASYAK 560
           +  Y S     AK
Sbjct: 654 VVTYGSVIDGLAK 666



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 111/419 (26%), Positives = 200/419 (47%), Gaps = 3/419 (0%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           + +++F+ M  +  +P  +A   ++         +  + + ++  + G + ++  YN ++
Sbjct: 323 EAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCIL 382

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
               +   VD+  K   EM+ KD   +L TYN +I + CK G    AL V+D M+  G+ 
Sbjct: 383 SCLGRKGQVDEALKKFEEMK-KDAIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLF 441

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFR--DIKGATPNHVTYTTLIDGYCRANDLEEALRL 325
           P+++T N ++   C+  R+ +A  +F   D K   P+ VTY +LI+G  R   ++EA +L
Sbjct: 442 PNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKL 501

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
            E M      P  V Y S++R   K GR  D +++ NEM     +PD +  NT ++   K
Sbjct: 502 YEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFK 561

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            G+      +   +   G + D  +Y  LIHG  KA     A EL + M + G      +
Sbjct: 562 AGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRA 621

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+ ++DG+C         +LL+E  ++G    V  Y ++I    K +++D A  LF   +
Sbjct: 622 YNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK 681

Query: 506 GNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
             GI  + VIY+SL   + + G       I++++ ++ L   +  +     +  K  EI
Sbjct: 682 SKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEI 740



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 122/485 (25%), Positives = 204/485 (42%), Gaps = 35/485 (7%)

Query: 63  FFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKI 122
           F +  + A+PN    L ++  MI +L K    ++A  ++ + A++D    P+V+      
Sbjct: 398 FEEMKKDAIPN----LSTYNIMIDMLCKAGKLETA--LVVRDAMKDAGLFPNVI------ 445

Query: 123 HDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTD 182
                     ++ +V      +   D   +F+ +      P       L+  L +    D
Sbjct: 446 ---------TVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVD 496

Query: 183 MVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLI 242
             +K+Y++M+    + N  +Y  LI    K    +   K+  EM       DL   NT +
Sbjct: 497 EAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYM 556

Query: 243 ALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GAT 300
               K G   +  A+   ++  G  PD  +Y  LIHG  + G   EA  LF  +K  G  
Sbjct: 557 DCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCV 616

Query: 301 PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRL 360
            +   Y T+IDG+C++  + +A +L E M  KG  P VVTY S++  L K  R+ +A  L
Sbjct: 617 LDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYML 676

Query: 361 LNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCK 420
             E   K I  + V  ++LI+ + K+G    A  +   +++ GL  + +T+  L+    K
Sbjct: 677 FEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVK 736

Query: 421 AKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSV 480
           A+E+  A      M D   +P+Y +YS L+ G C             E   +G   +V  
Sbjct: 737 AEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFT 796

Query: 481 YRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL------------AYAYWRAGE 528
           Y  +I    K   +  A  LF   +  G + DS IY ++            AY  +    
Sbjct: 797 YTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEAR 856

Query: 529 PKACS 533
            K CS
Sbjct: 857 LKGCS 861



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 97/371 (26%), Positives = 169/371 (45%), Gaps = 2/371 (0%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N+ V + L+  +      +DG +++++M      P L      ++ + K    +    ++
Sbjct: 513 NAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALF 572

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
           +++  LG + +   Y +LIH   K+    +  +L   M+ +    D   YNT+I  +CK 
Sbjct: 573 QEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKS 632

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTY 306
           G   +A  + + M+ +G  P +VTY S+I G  +  R+ EA  LF + K  G   N V Y
Sbjct: 633 GKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIY 692

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
           ++LIDG+ +   ++EA  + E +  KG+ P V T+N +L  L K   I +A      M +
Sbjct: 693 SSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKD 752

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
            K  P+ +T + LI+  CKI     A      M + G   + FTY  +I G  KA  +  
Sbjct: 753 LKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVE 812

Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
           A  L     + G       Y+ +++G  N N      +L +E   +G  +       L+ 
Sbjct: 813 ADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCVVLLD 872

Query: 487 RFCKKEKVDYA 497
              K E ++ A
Sbjct: 873 SLHKAECIEQA 883



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/229 (23%), Positives = 96/229 (41%)

Query: 340 TYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRM 399
            YNS+L  + +  +     ++L EM+     P N TC  ++ ++ K      A      M
Sbjct: 132 AYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTM 191

Query: 400 LEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNE 459
            +         Y  LI     +++ D    L   M + G++ +   ++ L+  +  +   
Sbjct: 192 RKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRV 251

Query: 460 EALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
           +A L LLDE  S  L  DV +Y   I  F K  KVD A + F+ M+ NG++ D V YTS+
Sbjct: 252 DAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSM 311

Query: 520 AYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLF 568
                +A       ++ + M + + +     Y +    Y    +  D +
Sbjct: 312 IGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAY 360



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 55/248 (22%), Positives = 100/248 (40%), Gaps = 3/248 (1%)

Query: 317 NDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTC 376
           N LE+ L   E M+  G  P   T   I+    K  ++R+A   +  M + K  P     
Sbjct: 147 NCLEQIL---EEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAY 203

Query: 377 NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD 436
             LI A     D+   + +  +M E G  ++   +  LI  F +   +D A  LL  M  
Sbjct: 204 TNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKS 263

Query: 437 AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDY 496
               P    Y+  +D +      +   K   E  + GL +D   Y ++I   CK ++++ 
Sbjct: 264 NSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRLNE 323

Query: 497 AQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSA 556
           A  LF  M  N  +  +  Y ++   Y  AG+ +    +L+   R+  + ++  Y    +
Sbjct: 324 AVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILS 383

Query: 557 SYAKDNEI 564
              +  ++
Sbjct: 384 CLGRKGQV 391



 Score = 42.7 bits (99), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 28/128 (21%), Positives = 54/128 (42%), Gaps = 17/128 (13%)

Query: 50  LYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDF 109
           ++  C I   + AF  W E     +K ++ ++ TMI  L K  +   A  + EK   +  
Sbjct: 766 IHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGG 825

Query: 110 LSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACT 169
           ++  ++ NA+++                   +N     D  ++F++ R+     +   C 
Sbjct: 826 VADSAIYNAIIE-----------------GLSNANRASDAYRLFEEARLKGCSIYTKTCV 868

Query: 170 VLLNSLAK 177
           VLL+SL K
Sbjct: 869 VLLDSLHK 876


>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
          Length = 602

 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 110/418 (26%), Positives = 192/418 (45%), Gaps = 4/418 (0%)

Query: 128 GNSHVLSWLVIFYANLKMTQ--DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVW 185
           G   V ++  +     KM +  D  +V D+MR  +  P      +++ SL      D+  
Sbjct: 154 GQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL 213

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
           KV  +++       +  Y +LI A      VD+  KL+ EM  + ++ D+FTYNT+I   
Sbjct: 214 KVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGM 273

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNH 303
           CK+GM   A  +   +E +G  PD+++YN L+     +G+  E  +L   +  +   PN 
Sbjct: 274 CKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNV 333

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
           VTY+ LI   CR   +EEA+ L ++M  KG+ P   +Y+ ++   C+EGR+  A   L  
Sbjct: 334 VTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLET 393

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
           M      PD V  NT++   CK G    A+++  ++ E G   +  +Y  +      + +
Sbjct: 394 MISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGD 453

Query: 424 MDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRA 483
              A  ++  M+  G  P   +Y+ ++   C +   +   +LL +  S      V  Y  
Sbjct: 454 KIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNI 513

Query: 484 LIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
           ++  FCK  +++ A  +   M GNG   +   YT L      AG      ++ +D+ R
Sbjct: 514 VLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVR 571



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 107/394 (27%), Positives = 178/394 (45%), Gaps = 3/394 (0%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           + L + + M      P +  CT L+      R      +V + + + G   ++  YN LI
Sbjct: 107 ESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQ-PDVFAYNALI 165

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
           +  CK + +D   ++L  M  KD   D  TYN +I   C +G    AL V +++  +   
Sbjct: 166 NGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQ 225

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
           P ++TY  LI     EG + EA +L  ++  +G  P+  TY T+I G C+   ++ A  +
Sbjct: 226 PTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEM 285

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
              +  KG  P V++YN +LR L  +G+  +  +L+ +M  +K  P+ VT + LI   C+
Sbjct: 286 VRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCR 345

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            G    AM +   M E GL  D ++Y  LI  FC+   +D+A E L  M+  G  P   +
Sbjct: 346 DGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVN 405

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+ ++   C     +  L++  +    G   + S Y  +            A  +   M 
Sbjct: 406 YNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMM 465

Query: 506 GNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
            NGI  D + Y S+     R G      ++L DM
Sbjct: 466 SNGIDPDEITYNSMISCLCREGMVDEAFELLVDM 499



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 95/327 (29%), Positives = 159/327 (48%), Gaps = 4/327 (1%)

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI-KGATPNHV 304
           C+ G + E+L + + M R+G +PD++    LI GF     + +A R+   + K   P+  
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDVF 159

Query: 305 TYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM 364
            Y  LI+G+C+ N +++A R+ + M +K   P  VTYN ++  LC  G++  A ++LN++
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQL 219

Query: 365 NEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEM 424
                 P  +T   LI A    G    A+K+ + ML  GL  D FTY  +I G CK   +
Sbjct: 220 LSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMV 279

Query: 425 DIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRAL 484
           D A E++  +   G  P   SY+ L+    N+   E   KL+ +  S     +V  Y  L
Sbjct: 280 DRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSIL 339

Query: 485 IRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL 544
           I   C+  K++ A  L  LM+  G+  D+  Y  L  A+ R G      + L+ M     
Sbjct: 340 ITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGC 399

Query: 545 MITLKIYRSFSASYAKD---NEILDLF 568
           +  +  Y +  A+  K+   ++ L++F
Sbjct: 400 LPDIVNYNTVLATLCKNGKADQALEIF 426



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 105/257 (40%), Gaps = 38/257 (14%)

Query: 344 ILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAG 403
           I  + C+ G   ++  LL  M  K   PD + C  LI  +  + +   A++V   +LE  
Sbjct: 95  IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKF 153

Query: 404 LMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNN----- 458
              D F Y ALI+GFCK   +D A  +L  M    FSP   +Y+ ++   C++       
Sbjct: 154 GQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL 213

Query: 459 -------------------------------EEALLKLLDEFVSRGLCVDVSVYRALIRR 487
                                          +EA LKL+DE +SRGL  D+  Y  +IR 
Sbjct: 214 KVLNQLLSDNCQPTVITYTILIEATMLEGGVDEA-LKLMDEMLSRGLKPDMFTYNTIIRG 272

Query: 488 FCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMIT 547
            CK+  VD A  +   ++  G   D + Y  L  A    G+ +    ++  M+  +    
Sbjct: 273 MCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPN 332

Query: 548 LKIYRSFSASYAKDNEI 564
           +  Y     +  +D +I
Sbjct: 333 VVTYSILITTLCRDGKI 349


>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Brachypodium distachyon]
          Length = 966

 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 120/412 (29%), Positives = 200/412 (48%), Gaps = 22/412 (5%)

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
           +  +++ K+M++ G V +   Y  +I   C++  V+K   L  EM+   V  D++TY  L
Sbjct: 434 EKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTIL 493

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGAT- 300
           I  +CK G+  +A +  D M   G SP++VTY +L+H + +  ++ +A  +F  +  A  
Sbjct: 494 IDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAAC 553

Query: 301 -PNHVTYTTLIDGYCRANDLEEALRLRE-VMAAKG---------------VYPGVVTYNS 343
            PN VTY+ LIDG C+A ++++A  + E ++   G               + P VVTY +
Sbjct: 554 YPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGA 613

Query: 344 ILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAG 403
           ++  LCK  ++ DA+ LL+ M      P+ +  + LI+ +CKIG   +A +V  RM + G
Sbjct: 614 LIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCG 673

Query: 404 LMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALL 463
            +    TY +LI    K   +D+A ++L  ML+   +P+  +Y+ ++DG       E  L
Sbjct: 674 YLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKAL 733

Query: 464 KLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAY 523
            LL     +G   +V  Y ALI    K  K D + +LF  M   G   + V Y  L    
Sbjct: 734 NLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHC 793

Query: 524 WRAGEPKACSDILDDMYRRRLMITLKIY----RSFSASYAKDNEILDLFWSH 571
             AG       +LD+M        L+ Y    + FS  +     +L+   SH
Sbjct: 794 CAAGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGFSKKFIASLGLLEEMESH 845



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 103/377 (27%), Positives = 175/377 (46%), Gaps = 18/377 (4%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           +   Q+  +M     +P     T ++  L + +  +  + ++++M + GV  +++ Y +L
Sbjct: 434 EKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTIL 493

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           I + CK+  +++      EM       ++ TY  L+  Y K     +A  +  RM     
Sbjct: 494 IDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAAC 553

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDIKGAT------------------PNHVTYTT 308
            P+ VTY++LI G C+ G +++A  ++  + G +                  PN VTY  
Sbjct: 554 YPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGA 613

Query: 309 LIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKK 368
           LIDG C+A  + +A  L + M A G  P  + Y++++   CK G+I +A  +   M +  
Sbjct: 614 LIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCG 673

Query: 369 IAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAK 428
             P   T  +LI+   K G    AMKV + ML      +  TY A+I G  K  E++ A 
Sbjct: 674 YLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKAL 733

Query: 429 ELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRF 488
            LL  M + G SP+  +Y+ L+DG       +A LKL  +  S+G   +   YR LI   
Sbjct: 734 NLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHC 793

Query: 489 CKKEKVDYAQRLFNLMQ 505
           C    +D A  L + M+
Sbjct: 794 CAAGLLDEAHLLLDEMK 810



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 108/420 (25%), Positives = 192/420 (45%), Gaps = 22/420 (5%)

Query: 126 PDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVW 185
           PD +++  + ++ F    K  +    +F +M+   + P ++  T+L++S  K  L +   
Sbjct: 450 PDTSTY--TKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQAR 507

Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
             + +M  +G   N+  Y  L+HA  KS  + +   +   M       +  TY+ LI   
Sbjct: 508 SWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGL 567

Query: 246 CKKGMHYEALAVQDRMER-----------EG-----ISPDIVTYNSLIHGFCREGRMREA 289
           CK G   +A  V +++             EG     I+P++VTY +LI G C+  ++ +A
Sbjct: 568 CKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDA 627

Query: 290 RRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRK 347
             L   +   G  PN + Y  LIDG+C+   ++ A  +   M   G  P V TY S++ +
Sbjct: 628 HELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDR 687

Query: 348 LCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLD 407
           + K+GR+  A ++L+EM      P+ VT   +I+   K+G+   A+ + + M E G   +
Sbjct: 688 MFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPN 747

Query: 408 QFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLD 467
             TY ALI G  K  + D + +L   M   G +P+Y +Y  L++  C     +    LLD
Sbjct: 748 VVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLD 807

Query: 468 EFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
           E         +  Y   ++ F KK        L   M+ +  +  + +Y  L  ++ +AG
Sbjct: 808 EMKHTHWPKHLQGYHCAVQGFSKKFIASLG--LLEEMESHETVPIAPVYGMLIDSFSKAG 865



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 114/458 (24%), Positives = 192/458 (41%), Gaps = 67/458 (14%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           + +    +MR ++ +P++     LL+   K +      ++   M+  G   N  L+N L+
Sbjct: 289 EAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLV 348

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK------------------- 248
           H  C + D     KL   M           YN  I   C +                   
Sbjct: 349 HGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEM 408

Query: 249 ----------------------GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRM 286
                                 G   +A  +   M R+G  PD  TY  +I   C+  ++
Sbjct: 409 LAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKV 468

Query: 287 REARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSI 344
            ++  LF+++K  G  P+  TYT LID +C+A  +E+A    + M + G  P VVTY ++
Sbjct: 469 EKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTAL 528

Query: 345 LRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML-EAG 403
           L    K  ++  A+ + + M +    P+ VT + LI+  CK G+   A +V  +++  +G
Sbjct: 529 LHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSG 588

Query: 404 LMLDQF---------------TYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
            +   F               TY ALI G CKA+++  A ELL  ML AG  P+   Y  
Sbjct: 589 NVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDA 648

Query: 449 LVDGYCN----KNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
           L+DG+C      N +E  L++       G    V  Y +LI R  K  ++D A ++ + M
Sbjct: 649 LIDGFCKIGKIDNAQEVFLRM----TKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEM 704

Query: 505 QGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRR 542
             +    + V YT++     + GE +   ++L  M  +
Sbjct: 705 LNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEK 742



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 120/485 (24%), Positives = 202/485 (41%), Gaps = 30/485 (6%)

Query: 57  PSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVL 116
           P L   FF WAE  V  Y H+   +  +  IL      ++A+ +L +I   D      +L
Sbjct: 114 PELCVRFFLWAERQV-GYSHTGACYDALAEILGFEDPARTAERLLREIGEDDREVLRRLL 172

Query: 117 NALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLA 176
           N LV+         H L W            + L+   +++     P       L+  LA
Sbjct: 173 NVLVR-----RCCRHGL-W-----------DEALEELGRLKDFGYRPSAVTYNALVQVLA 215

Query: 177 KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLF 236
                +M ++V K+M   G   +         A CK   V +    L  +E +D   D  
Sbjct: 216 SAGQVEMGFRVQKEMSASGFCMDRSTIGYFAQALCK---VGRWADALNMLEKEDFNLDTV 272

Query: 237 TYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI 296
               +I+   +  +  EA++   RM      P++VTY +L+ GF ++ +    +R+   +
Sbjct: 273 LCTQMISGLMEASLFNEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMM 332

Query: 297 --KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRI 354
             +G  PN   + +L+ GYC A D   A +L   M   G  PG V YN  +  +C +  +
Sbjct: 333 MTEGCNPNPSLFNSLVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEEL 392

Query: 355 RDA------NRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ 408
            +A       ++  EM       + V         C +G    A ++   M+  G + D 
Sbjct: 393 PNAELLDLVEKVYEEMLAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDT 452

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
            TY  +I   C+AK+++ +  L   M  AG +P   +Y+ L+D +C     E      DE
Sbjct: 453 STYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDE 512

Query: 469 FVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
             S G   +V  Y AL+  + K +++  A  +F+ M       ++V Y++L     +AGE
Sbjct: 513 MRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGE 572

Query: 529 -PKAC 532
             KAC
Sbjct: 573 IQKAC 577



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 93/376 (24%), Positives = 153/376 (40%), Gaps = 10/376 (2%)

Query: 202 LYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRM 261
           L NVL+  CC+    D+  + L  ++    R    TYN L+ +    G       VQ  M
Sbjct: 171 LLNVLVRRCCRHGLWDEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEM 230

Query: 262 EREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEE 321
              G   D  T        C+ GR  +A  +    +    + V  T +I G   A+   E
Sbjct: 231 SASGFCMDRSTIGYFAQALCKVGRWADALNMLEK-EDFNLDTVLCTQMISGLMEASLFNE 289

Query: 322 ALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
           A+     M      P VVTY ++L    K+ +     R++N M  +   P+    N+L++
Sbjct: 290 AMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVH 349

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE------MDIAKELLFGML 435
            YC  GD A A K+ NRM   G       Y   I   C  +E      +D+ +++   ML
Sbjct: 350 GYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEML 409

Query: 436 DAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVD 495
            A    +  + +      C     E   ++L E + +G   D S Y  +I   C+ +KV+
Sbjct: 410 AASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVE 469

Query: 496 YAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFS 555
            +  LF  M+  G+  D   YT L  ++ +AG  +      D+M        +  Y +  
Sbjct: 470 KSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALL 529

Query: 556 ASYAKDNEIL---DLF 568
            +Y K  +++   D+F
Sbjct: 530 HAYLKSKQLIQAHDIF 545



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 82/329 (24%), Positives = 142/329 (43%), Gaps = 9/329 (2%)

Query: 115 VLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNS 174
           +L+A++    +P  N  V   L+  +  +    +  +VF +M     +P +H  T L++ 
Sbjct: 630 LLDAMLAAGCEP--NQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDR 687

Query: 175 LAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRAD 234
           + KD   D+  KV  +M+      N+  Y  +I    K  +++K   LL  ME K    +
Sbjct: 688 MFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPN 747

Query: 235 LFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR 294
           + TY  LI    K G    +L +  +M  +G +P+ VTY  LI+  C  G + EA  L  
Sbjct: 748 VVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLD 807

Query: 295 DIKGAT-PNHVT-YTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEG 352
           ++K    P H+  Y   + G+  +     +L L E M +    P    Y  ++    K G
Sbjct: 808 EMKHTHWPKHLQGYHCAVQGF--SKKFIASLGLLEEMESHETVPIAPVYGMLIDSFSKAG 865

Query: 353 RIRDANRLLNEMNEKKIAPDNVTCN---TLINAYCKIGDTASAMKVKNRMLEAGLMLDQF 409
           R+  A  L  E+ E   + +  +     +LI A C       A  +   M   G++ D  
Sbjct: 866 RLETALELHKELVEVSSSLNMTSTGMYASLIQALCLASQVEEAFTLYTEMTRKGIVPDLI 925

Query: 410 TYKALIHGFCKAKEMDIAKELLFGMLDAG 438
            + +L+ G  +  + D A +L +G    G
Sbjct: 926 VFVSLVKGLIEVNKWDEALQLCYGRCHEG 954


>gi|297736961|emb|CBI26162.3| unnamed protein product [Vitis vinifera]
          Length = 636

 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 102/349 (29%), Positives = 170/349 (48%), Gaps = 2/349 (0%)

Query: 145 MTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYN 204
           + ++ + VF Q++   +   +     +L    +    D VW++Y +MV+  VVA++H   
Sbjct: 207 LVEEAISVFGQLKGIGVCASIATWNSVLRGSVRAGRIDFVWELYGEMVESSVVADVHTVG 266

Query: 205 VLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMERE 264
            L+ A C  + +     LL  +    V      +N LI+ +CK   +     +   M   
Sbjct: 267 YLVQAFCDENRISDGHNLLRRVLEDGVVPRNAAFNKLISGFCKDKAYGRVSDLLHSMIAR 326

Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
             +PDI TY  +++G C+ G+  E  R+F+D+K  G  P+ V YTT+I G CR   L +A
Sbjct: 327 NRAPDIFTYQEVVNGLCKGGKGPEGFRVFKDLKDRGYAPDRVMYTTMIHGLCRMKWLGDA 386

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
            +L   M  KG  P   TYN+++    K G + +A ++  EM +K      V+ N +I  
Sbjct: 387 RKLWFEMIQKGFLPNEYTYNAMIHGYFKIGNLEEAWKMYREMCDKGYGEKTVSYNVMIKG 446

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
            C  G    A  +   M   G++ +  TY AL+ GFCK  ++     LL+ +LD G  PS
Sbjct: 447 LCSHGKIKEAHDLFEEMSHKGILRNHITYNALVRGFCKEGKIVEGANLLYELLDQGIQPS 506

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
             SY+ L+D  C + + +    L D+  +RG+   V  +  +I  FCK+
Sbjct: 507 AASYAPLIDKLCQEGDMQNAKILWDDMQNRGMEPAVCTHDFMITGFCKQ 555



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 92/366 (25%), Positives = 173/366 (47%), Gaps = 2/366 (0%)

Query: 131 HVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKK 190
           H + +LV  + +     DG  +  ++    ++P   A   L++   KD+    V  +   
Sbjct: 263 HTVGYLVQAFCDENRISDGHNLLRRVLEDGVVPRNAAFNKLISGFCKDKAYGRVSDLLHS 322

Query: 191 MVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGM 250
           M+      +I  Y  +++  CK     +  ++  +++ +    D   Y T+I   C+   
Sbjct: 323 MIARNRAPDIFTYQEVVNGLCKGGKGPEGFRVFKDLKDRGYAPDRVMYTTMIHGLCRMKW 382

Query: 251 HYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTT 308
             +A  +   M ++G  P+  TYN++IHG+ + G + EA +++R++  KG     V+Y  
Sbjct: 383 LGDARKLWFEMIQKGFLPNEYTYNAMIHGYFKIGNLEEAWKMYREMCDKGYGEKTVSYNV 442

Query: 309 LIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKK 368
           +I G C    ++EA  L E M+ KG+    +TYN+++R  CKEG+I +   LL E+ ++ 
Sbjct: 443 MIKGLCSHGKIKEAHDLFEEMSHKGILRNHITYNALVRGFCKEGKIVEGANLLYELLDQG 502

Query: 369 IAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAK 428
           I P   +   LI+  C+ GD  +A  + + M   G+     T+  +I GFCK        
Sbjct: 503 IQPSAASYAPLIDKLCQEGDMQNAKILWDDMQNRGMEPAVCTHDFMITGFCKQGCAMEGM 562

Query: 429 ELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRF 488
           E L  ML +   P   S+  L+      +  +  L +LD  +  G  + +S+  +L+ + 
Sbjct: 563 EWLTTMLRSKLRPQKKSFESLIQCLSQIDRLDDALLVLDSMLKIGFRLSISICNSLVTKL 622

Query: 489 CKKEKV 494
           C+K  +
Sbjct: 623 CEKNSL 628



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 83/340 (24%), Positives = 154/340 (45%), Gaps = 2/340 (0%)

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           I   CK   V++   +  +++   V A + T+N+++    + G       +   M    +
Sbjct: 199 IRCLCKGGLVEEAISVFGQLKGIGVCASIATWNSVLRGSVRAGRIDFVWELYGEMVESSV 258

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
             D+ T   L+  FC E R+ +   L R +   G  P +  +  LI G+C+         
Sbjct: 259 VADVHTVGYLVQAFCDENRISDGHNLLRRVLEDGVVPRNAAFNKLISGFCKDKAYGRVSD 318

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           L   M A+   P + TY  ++  LCK G+  +  R+  ++ ++  APD V   T+I+  C
Sbjct: 319 LLHSMIARNRAPDIFTYQEVVNGLCKGGKGPEGFRVFKDLKDRGYAPDRVMYTTMIHGLC 378

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           ++     A K+   M++ G + +++TY A+IHG+ K   ++ A ++   M D G+     
Sbjct: 379 RMKWLGDARKLWFEMIQKGFLPNEYTYNAMIHGYFKIGNLEEAWKMYREMCDKGYGEKTV 438

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
           SY+ ++ G C+    +    L +E   +G+  +   Y AL+R FCK+ K+     L   +
Sbjct: 439 SYNVMIKGLCSHGKIKEAHDLFEEMSHKGILRNHITYNALVRGFCKEGKIVEGANLLYEL 498

Query: 505 QGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL 544
              GI   +  Y  L     + G+ +    + DDM  R +
Sbjct: 499 LDQGIQPSAASYAPLIDKLCQEGDMQNAKILWDDMQNRGM 538



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 87/351 (24%), Positives = 156/351 (44%), Gaps = 27/351 (7%)

Query: 84  MIHILTKNKHFKSAQNMLEKIALR----DFLSTPSVLNALVKIHDDPDGNSHVLSWLVIF 139
           +I    K+K +    ++L  +  R    D  +   V+N L K    P+G           
Sbjct: 303 LISGFCKDKAYGRVSDLLHSMIARNRAPDIFTYQEVVNGLCKGGKGPEG----------- 351

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
                      +VF  ++     P     T +++ L + +      K++ +M+Q G + N
Sbjct: 352 ----------FRVFKDLKDRGYAPDRVMYTTMIHGLCRMKWLGDARKLWFEMIQKGFLPN 401

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
            + YN +IH   K  ++++  K+  EM  K       +YN +I   C  G   EA  + +
Sbjct: 402 EYTYNAMIHGYFKIGNLEEAWKMYREMCDKGYGEKTVSYNVMIKGLCSHGKIKEAHDLFE 461

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRAN 317
            M  +GI  + +TYN+L+ GFC+EG++ E   L  ++  +G  P+  +Y  LID  C+  
Sbjct: 462 EMSHKGILRNHITYNALVRGFCKEGKIVEGANLLYELLDQGIQPSAASYAPLIDKLCQEG 521

Query: 318 DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCN 377
           D++ A  L + M  +G+ P V T++ ++   CK+G   +    L  M   K+ P   +  
Sbjct: 522 DMQNAKILWDDMQNRGMEPAVCTHDFMITGFCKQGCAMEGMEWLTTMLRSKLRPQKKSFE 581

Query: 378 TLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAK 428
           +LI    +I     A+ V + ML+ G  L      +L+   C+   + I K
Sbjct: 582 SLIQCLSQIDRLDDALLVLDSMLKIGFRLSISICNSLVTKLCEKNSLPILK 632



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 80/361 (22%), Positives = 150/361 (41%), Gaps = 39/361 (10%)

Query: 256 AVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGY 313
           A +  ++    +P   +  + I   C+ G + EA  +F  +K  G   +  T+ +++ G 
Sbjct: 178 AAKSFLDSTNFNPKPASLEAYIRCLCKGGLVEEAISVFGQLKGIGVCASIATWNSVLRGS 237

Query: 314 CRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDN 373
            RA  ++    L   M    V   V T   +++  C E RI D + LL  + E  + P N
Sbjct: 238 VRAGRIDFVWELYGEMVESSVVADVHTVGYLVQAFCDENRISDGHNLLRRVLEDGVVPRN 297

Query: 374 VTCNTLINAYCK------IGDTASAMKVKNR----------------------------- 398
              N LI+ +CK      + D   +M  +NR                             
Sbjct: 298 AAFNKLISGFCKDKAYGRVSDLLHSMIARNRAPDIFTYQEVVNGLCKGGKGPEGFRVFKD 357

Query: 399 MLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNN 458
           + + G   D+  Y  +IHG C+ K +  A++L F M+  GF P+  +Y+ ++ GY    N
Sbjct: 358 LKDRGYAPDRVMYTTMIHGLCRMKWLGDARKLWFEMIQKGFLPNEYTYNAMIHGYFKIGN 417

Query: 459 EEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTS 518
            E   K+  E   +G       Y  +I+  C   K+  A  LF  M   GIL + + Y +
Sbjct: 418 LEEAWKMYREMCDKGYGEKTVSYNVMIKGLCSHGKIKEAHDLFEEMSHKGILRNHITYNA 477

Query: 519 LAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD--LFWSHVVDRG 576
           L   + + G+    +++L ++  + +  +   Y        ++ ++ +  + W  + +RG
Sbjct: 478 LVRGFCKEGKIVEGANLLYELLDQGIQPSAASYAPLIDKLCQEGDMQNAKILWDDMQNRG 537

Query: 577 L 577
           +
Sbjct: 538 M 538



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 80/324 (24%), Positives = 136/324 (41%), Gaps = 7/324 (2%)

Query: 263 REGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEA 322
           + G SPD  + N L       G    A+  F D     P   +    I   C+   +EEA
Sbjct: 153 QSGFSPDSSSCNVLFDALVEAGACNAAKS-FLDSTNFNPKPASLEAYIRCLCKGGLVEEA 211

Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
           + +   +   GV   + T+NS+LR   + GRI     L  EM E  +  D  T   L+ A
Sbjct: 212 ISVFGQLKGIGVCASIATWNSVLRGSVRAGRIDFVWELYGEMVESSVVADVHTVGYLVQA 271

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
           +C     +    +  R+LE G++     +  LI GFCK K      +LL  M+    +P 
Sbjct: 272 FCDENRISDGHNLLRRVLEDGVVPRNAAFNKLISGFCKDKAYGRVSDLLHSMIARNRAPD 331

Query: 443 YCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN 502
             +Y  +V+G C         ++  +   RG   D  +Y  +I   C+ + +  A++L+ 
Sbjct: 332 IFTYQEVVNGLCKGGKGPEGFRVFKDLKDRGYAPDRVMYTTMIHGLCRMKWLGDARKLWF 391

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEP----KACSDILDDMYRRRLMITLKIYRSFSASY 558
            M   G L +   Y ++ + Y++ G      K   ++ D  Y  +  ++  +      S+
Sbjct: 392 EMIQKGFLPNEYTYNAMIHGYFKIGNLEEAWKMYREMCDKGYGEK-TVSYNVMIKGLCSH 450

Query: 559 AKDNEILDLFWSHVVDRGLMSKHI 582
            K  E  DLF   +  +G++  HI
Sbjct: 451 GKIKEAHDLF-EEMSHKGILRNHI 473



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/305 (22%), Positives = 120/305 (39%), Gaps = 54/305 (17%)

Query: 83  TMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYAN 142
           TMIH L + K    A+ +  ++  + FL      NA++  +                   
Sbjct: 372 TMIHGLCRMKWLGDARKLWFEMIQKGFLPNEYTYNAMIHGY------------------- 412

Query: 143 LKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHL 202
                         ++ NL                    +  WK+Y++M   G       
Sbjct: 413 -------------FKIGNL--------------------EEAWKMYREMCDKGYGEKTVS 439

Query: 203 YNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRME 262
           YNV+I   C    + +   L  EM  K +  +  TYN L+  +CK+G   E   +   + 
Sbjct: 440 YNVMIKGLCSHGKIKEAHDLFEEMSHKGILRNHITYNALVRGFCKEGKIVEGANLLYELL 499

Query: 263 REGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLE 320
            +GI P   +Y  LI   C+EG M+ A+ L+ D+  +G  P   T+  +I G+C+     
Sbjct: 500 DQGIQPSAASYAPLIDKLCQEGDMQNAKILWDDMQNRGMEPAVCTHDFMITGFCKQGCAM 559

Query: 321 EALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLI 380
           E +     M    + P   ++ S+++ L +  R+ DA  +L+ M +         CN+L+
Sbjct: 560 EGMEWLTTMLRSKLRPQKKSFESLIQCLSQIDRLDDALLVLDSMLKIGFRLSISICNSLV 619

Query: 381 NAYCK 385
              C+
Sbjct: 620 TKLCE 624



 Score = 44.3 bits (103), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 46/251 (18%), Positives = 88/251 (35%), Gaps = 40/251 (15%)

Query: 365 NEKKIAPDNVTCNTLINA--------------------------------YCKIGDTASA 392
           ++   +PD+ +CN L +A                                 CK G    A
Sbjct: 152 SQSGFSPDSSSCNVLFDALVEAGACNAAKSFLDSTNFNPKPASLEAYIRCLCKGGLVEEA 211

Query: 393 MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
           + V  ++   G+     T+ +++ G  +A  +D   EL   M+++       +  +LV  
Sbjct: 212 ISVFGQLKGIGVCASIATWNSVLRGSVRAGRIDFVWELYGEMVESSVVADVHTVGYLVQA 271

Query: 453 YCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGD 512
           +C++N       LL   +  G+    + +  LI  FCK +       L + M       D
Sbjct: 272 FCDENRISDGHNLLRRVLEDGVVPRNAAFNKLISGFCKDKAYGRVSDLLHSMIARNRAPD 331

Query: 513 SVIYTSLAYAYWRAGEPKACSDILDDMYRR-----RLMITLKIYRSFSASYAKDNEILDL 567
              Y  +     + G+      +  D+  R     R+M T  I+      +  D   L  
Sbjct: 332 IFTYQEVVNGLCKGGKGPEGFRVFKDLKDRGYAPDRVMYTTMIHGLCRMKWLGDARKL-- 389

Query: 568 FWSHVVDRGLM 578
            W  ++ +G +
Sbjct: 390 -WFEMIQKGFL 399


>gi|115446773|ref|NP_001047166.1| Os02g0565400 [Oryza sativa Japonica Group]
 gi|113536697|dbj|BAF09080.1| Os02g0565400, partial [Oryza sativa Japonica Group]
          Length = 353

 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 102/349 (29%), Positives = 180/349 (51%), Gaps = 6/349 (1%)

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNH 303
           CK+  + +A+ + D M  +G +PDIVTYN +++G C+EGR+ +A    +++   G  PN 
Sbjct: 3   CKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNT 62

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
           V+Y  ++ G C A   E+A  L   M  KG  P VVT+N ++  LC++G +  A  +L +
Sbjct: 63  VSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQ 122

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
           + +    P++++ N L++A+CK      AM   + M+  G   D  +Y  L+   C++ E
Sbjct: 123 IPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGE 182

Query: 424 MDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRA 483
           +D+A ELL  + D G +P   SY+ ++DG       +  L+LL+E VS+GL  D+  Y  
Sbjct: 183 VDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYST 242

Query: 484 LIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRR 543
           +    C++++++ A R F  +Q  GI  ++V+Y ++     +  E  +  D+   M    
Sbjct: 243 IAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNG 302

Query: 544 LMITLKIYRSFSASYAKDN---EILDLFWSHVVDRGLMSKHIFKEMQLR 589
            M     Y       A +    E  DL    +  RG++ K +  +  +R
Sbjct: 303 CMPNESTYTILIEGLAYEGLIKEARDLL-DELCSRGVVRKSLINKGAIR 350



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 96/343 (27%), Positives = 181/343 (52%), Gaps = 4/343 (1%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           +  +++ D+MR     P +    V++N + ++   D   +  K +   G   N   YN++
Sbjct: 9   KQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIV 68

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           +   C +   +  E+L+ EM  K    ++ T+N LI+  C+KG+   AL V +++ + G 
Sbjct: 69  LKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGC 128

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI---KGATPNHVTYTTLIDGYCRANDLEEAL 323
           +P+ ++YN L+H FC++ +M +A   F D+   +G  P+ V+Y TL+   CR+ +++ A+
Sbjct: 129 TPNSLSYNPLLHAFCKQKKMDKAMA-FLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAV 187

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
            L   +  KG  P +++YN+++  L K G+ ++A  LLNEM  K + PD +T +T+    
Sbjct: 188 ELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGL 247

Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY 443
           C+      A++   ++ + G+  +   Y A+I G CK +E   A +L   M+  G  P+ 
Sbjct: 248 CREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNE 307

Query: 444 CSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
            +Y+ L++G   +   +    LLDE  SRG+     + +  IR
Sbjct: 308 STYTILIEGLAYEGLIKEARDLLDELCSRGVVRKSLINKGAIR 350



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 101/336 (30%), Positives = 162/336 (48%), Gaps = 2/336 (0%)

Query: 209 ACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISP 268
           A CK S   +  KLL EM  K    D+ TYN ++   C++G   +A+     +   G  P
Sbjct: 1   ATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEP 60

Query: 269 DIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLR 326
           + V+YN ++ G C   R  +A  L  ++  KG  PN VT+  LI   CR   +E AL + 
Sbjct: 61  NTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVL 120

Query: 327 EVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKI 386
           E +   G  P  ++YN +L   CK+ ++  A   L+ M  +   PD V+ NTL+ A C+ 
Sbjct: 121 EQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRS 180

Query: 387 GDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSY 446
           G+   A+++ +++ + G      +Y  +I G  KA +   A ELL  M+  G  P   +Y
Sbjct: 181 GEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITY 240

Query: 447 SWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQG 506
           S +  G C ++  E  ++   +    G+  +  +Y A+I   CK+ +   A  LF  M G
Sbjct: 241 STIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIG 300

Query: 507 NGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRR 542
           NG + +   YT L       G  K   D+LD++  R
Sbjct: 301 NGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSR 336



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 74/243 (30%), Positives = 121/243 (49%), Gaps = 2/243 (0%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N    + L+ F     + +  L+V +Q+  +   P+  +   LL++  K +  D      
Sbjct: 96  NVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFL 155

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
             MV  G   +I  YN L+ A C+S +VD   +LL +++ K     L +YNT+I    K 
Sbjct: 156 DLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKA 215

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTY 306
           G   EAL + + M  +G+ PDI+TY+++  G CRE R+ +A R F  ++  G  PN V Y
Sbjct: 216 GKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLY 275

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
             +I G C+  +   A+ L   M   G  P   TY  ++  L  EG I++A  LL+E+  
Sbjct: 276 NAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCS 335

Query: 367 KKI 369
           + +
Sbjct: 336 RGV 338



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 45/183 (24%), Positives = 78/183 (42%)

Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
           A CK      AMK+ + M + G   D  TY  +++G C+   +D A E L  +   G  P
Sbjct: 1   ATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEP 60

Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
           +  SY+ ++ G C     E   +L+ E   +G   +V  +  LI   C+K  V+ A  + 
Sbjct: 61  NTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVL 120

Query: 502 NLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKD 561
             +   G   +S+ Y  L +A+ +  +       LD M  R     +  Y +   +  + 
Sbjct: 121 EQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRS 180

Query: 562 NEI 564
            E+
Sbjct: 181 GEV 183



 Score = 46.2 bits (108), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 57/247 (23%), Positives = 96/247 (38%), Gaps = 57/247 (23%)

Query: 71  VPNYKHSLQS--HWTMIHILTKNKHFKSAQNMLEKIALR----DFLSTPSVLNALVK--- 121
           +P Y  +  S  +  ++H   K K    A   L+ +  R    D +S  ++L AL +   
Sbjct: 123 IPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGE 182

Query: 122 -------IHDDPD-GNSHVL-SWLVIFYANLKM--TQDGLQVFDQMRVHNLMPHLHACTV 170
                  +H   D G + VL S+  +     K   T++ L++ ++M    L P +   + 
Sbjct: 183 VDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYST 242

Query: 171 LLNSLAK-DRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFK 229
           +   L + DR+ D + + + K+  +G+  N  LYN +I   CK  +              
Sbjct: 243 IAAGLCREDRIEDAI-RAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSA---------- 291

Query: 230 DVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA 289
               DLF Y                      M   G  P+  TY  LI G   EG ++EA
Sbjct: 292 ---IDLFAY----------------------MIGNGCMPNESTYTILIEGLAYEGLIKEA 326

Query: 290 RRLFRDI 296
           R L  ++
Sbjct: 327 RDLLDEL 333


>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Vitis vinifera]
          Length = 898

 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 111/419 (26%), Positives = 205/419 (48%), Gaps = 3/419 (0%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           + +++F+Q+  +  +P  +A   ++         D  + + ++    G + ++  YN ++
Sbjct: 318 EAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCIL 377

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
               K   V++  ++  EM+ +D   ++ TYN LI + C++G    AL ++D MER G+ 
Sbjct: 378 TCLGKKRRVEEALRIFEEMK-RDAVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLF 436

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFR--DIKGATPNHVTYTTLIDGYCRANDLEEALRL 325
           P+++T N +I   C+  ++ EA  +F   D K  TPN VT+++LIDG  +   +++A  L
Sbjct: 437 PNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSL 496

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
            E M   G  PG + Y S++R   K GR  D +++  EM     +PD    NT ++   K
Sbjct: 497 YEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFK 556

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            G+T     +   +   G + D  +Y  LIHG  KA   +   EL + M + G      +
Sbjct: 557 AGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHA 616

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+ ++DG+C         +LL+E   +G    V  Y ++I    K +++D A  LF   +
Sbjct: 617 YNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK 676

Query: 506 GNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
            NGI  + V+Y+SL   + + G       I++++ ++ L   +  +     +  K  EI
Sbjct: 677 SNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEI 735



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 138/620 (22%), Positives = 250/620 (40%), Gaps = 90/620 (14%)

Query: 12  KFIKTISAIMLKGHWAKLLNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAV 71
           K +  +  I+  G W   L  N  S+L    + ++++ +       + +  +F+WAE   
Sbjct: 61  KGVDDVCCILESGPWGPTLE-NSLSALGEKPLPELVIGVLKRLKDANTAVNYFQWAEKQT 119

Query: 72  PNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSH 131
               H  +++ +++ ++ +N  F   + +LE+++L  F   PS               S+
Sbjct: 120 EKV-HCPEAYNSLLMVMARNTEFDHLERILEEMSLSGF--GPS---------------SN 161

Query: 132 VLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKM 191
           +   LV      +  ++   +   MR     P   A T+L+ +L++ R  D +  ++ +M
Sbjct: 162 ISIELVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGALSEVREPDPMLILFHQM 221

Query: 192 VQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLF--------------- 236
            +LG   N+HL+  LI    +   VD    LL EM+   + AD+                
Sbjct: 222 QELGYEVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKV 281

Query: 237 --------------------TYNTLIALYCK----------------------------- 247
                               TY ++I + CK                             
Sbjct: 282 DMSWKFFHEMKSHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTM 341

Query: 248 ------KGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK-GAT 300
                  G   EA  + +R + +G  P ++ YN ++    ++ R+ EA R+F ++K  A 
Sbjct: 342 IMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAV 401

Query: 301 PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRL 360
           PN  TY  LID  CR   L  AL +R+ M   G++P V+T N ++ +LCK  ++ +A  +
Sbjct: 402 PNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSI 461

Query: 361 LNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCK 420
              M++K   P+ VT ++LI+   K G    A  +  +ML+ G +     Y +LI  F K
Sbjct: 462 FEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFK 521

Query: 421 AKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSV 480
               +   ++   M+  G SP     +  +D        E    L  E  + G   D   
Sbjct: 522 CGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARS 581

Query: 481 YRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMY 540
           Y  LI    K    +    LF  M+  G + D+  Y ++   + ++G+      +L++M 
Sbjct: 582 YSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMK 641

Query: 541 RRRLMITLKIYRSFSASYAK 560
            +    T+  Y S     AK
Sbjct: 642 VKGHPPTVVTYGSVIDGLAK 661



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 115/447 (25%), Positives = 190/447 (42%), Gaps = 19/447 (4%)

Query: 106 LRDFLSTPSVLNALVKIHDDPD-----GNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHN 160
           L D L     LNA ++I DD +      N   ++ ++      +  ++   +F+ M    
Sbjct: 410 LIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKV 469

Query: 161 LMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVE 220
             P+    + L++ L K    D  + +Y+KM+  G V    +Y  LI +  K    +   
Sbjct: 470 CTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGH 529

Query: 221 KLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGF 280
           K+  EM       DL   NT +    K G   +  A+   +   G  PD  +Y+ LIHG 
Sbjct: 530 KIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGL 589

Query: 281 CREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGV 338
            + G   E   LF  +K  G   +   Y  +IDG+C++  + +A +L E M  KG  P V
Sbjct: 590 VKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTV 649

Query: 339 VTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNR 398
           VTY S++  L K  R+ +A  L  E     I  + V  ++LI+ + K+G    A  +   
Sbjct: 650 VTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEE 709

Query: 399 MLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNN 458
           +++ GL  + +T+  L+    KA+E++ A      M D    P+  +YS L++G C    
Sbjct: 710 LMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRK 769

Query: 459 EEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTS 518
                    E    GL  +   Y  +I    K   +  A  LF+  + NG + DS  Y +
Sbjct: 770 FNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNA 829

Query: 519 L------------AYAYWRAGEPKACS 533
           +            AYA +     K C+
Sbjct: 830 MIEGLSSANKAMDAYALFEETRLKGCN 856



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 93/353 (26%), Positives = 162/353 (45%), Gaps = 2/353 (0%)

Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
           +DG +++ +M      P L      ++ + K   T+    +++++   G + +   Y++L
Sbjct: 526 EDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSIL 585

Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
           IH   K+   ++  +L   M+ +    D   YN +I  +CK G   +A  + + M+ +G 
Sbjct: 586 IHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGH 645

Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALR 324
            P +VTY S+I G  +  R+ EA  LF + K  G   N V Y++LIDG+ +   ++EA  
Sbjct: 646 PPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYL 705

Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
           + E +  KG+ P V T+N +L  L K   I +A      M + K  P+ +T + LIN  C
Sbjct: 706 IMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLC 765

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           ++     A      M + GL  +  TY  +I G  KA  +  A  L       G  P   
Sbjct: 766 RVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSA 825

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYA 497
           SY+ +++G  + N       L +E   +G  +       L+    K E ++ A
Sbjct: 826 SYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDALHKAECLEQA 878



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/196 (24%), Positives = 88/196 (44%), Gaps = 2/196 (1%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N  V S L+  +  +    +   + +++    L P+++    LL++L K    +     +
Sbjct: 683 NVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICF 742

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
           + M  L    N   Y++LI+  C+    +K      EM+   ++ +  TY T+I+   K 
Sbjct: 743 QSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKA 802

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTY 306
           G   EA  +  R +  G  PD  +YN++I G     +  +A  LF +  +KG   +  T 
Sbjct: 803 GNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTC 862

Query: 307 TTLIDGYCRANDLEEA 322
             L+D   +A  LE+A
Sbjct: 863 VVLLDALHKAECLEQA 878


>gi|297848576|ref|XP_002892169.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338011|gb|EFH68428.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 662

 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 128/497 (25%), Positives = 227/497 (45%), Gaps = 22/497 (4%)

Query: 57  PSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVL 116
           P ++ +FF W+      Y H+L+ + +++ +L   K     + +  +I   +F  T S  
Sbjct: 132 PDIAWSFFCWSRKQ-KKYTHNLECYVSLVDVLALAKDVDRIRFICSEIRKFEFPMTVSPG 190

Query: 117 NALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLA 176
           N+L+K                  +  L M ++ L V+ +M+ + + P L+    L+N L 
Sbjct: 191 NSLIKS-----------------FGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLV 233

Query: 177 KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLF 236
                D   +V++ M    +  ++  YN +I   CK+    K  + L  ME K + AD  
Sbjct: 234 SAMFVDSAERVFEVMESGRIKPDVVTYNTMIKGYCKAGQTQKALEKLRVMETKGLEADKI 293

Query: 237 TYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI 296
           TY T+I            +A+   M+ +G+      ++ +I G C+EG++ E   +F ++
Sbjct: 294 TYMTMIQACYADSDFSSCVALYQEMDEKGLQVPPHAFSLVIGGLCKEGKLNEGYAVFENM 353

Query: 297 --KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRI 354
             KG+ PN   YT LIDGY +   +E+A+RL   M  +G  P VVTY+ ++  LCK GR+
Sbjct: 354 IRKGSKPNVAIYTVLIDGYAKTGSVEDAIRLLHRMIDEGFNPDVVTYSVVVNGLCKNGRV 413

Query: 355 RDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKAL 414
            +A           +A +++  ++LI+   K G    A ++   M E G   D + Y AL
Sbjct: 414 EEAMDYFQTCRFNGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNAL 473

Query: 415 IHGFCKAKEMDIAKELLFGM-LDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
           I  F K  ++D A  L   M  + G   +  +Y+ L+ G   ++  E  LKL D  + +G
Sbjct: 474 IDAFTKHGKVDEALALFKRMEEEEGCDQTVYTYTILISGMFKEHRNEEALKLWDMMIDKG 533

Query: 474 LCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACS 533
           +    +  RAL    C   KV  A ++ + +   G++ D+     +     +AG  K   
Sbjct: 534 ITPTAACLRALSTGLCLSGKVARACKILDELAPMGVILDAAC-EDMINTLCKAGRIKEAC 592

Query: 534 DILDDMYRRRLMITLKI 550
            + D +  R   +  +I
Sbjct: 593 KLADGITERGREVPGRI 609



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 89/317 (28%), Positives = 146/317 (46%), Gaps = 16/317 (5%)

Query: 274 NSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAA 331
           NSLI  F + G + E   ++R +K  G  P   TY  L++G   A  ++ A R+ EVM +
Sbjct: 191 NSLIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMES 250

Query: 332 KGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTAS 391
             + P VVTYN++++  CK G+ + A   L  M  K +  D +T  T+I A     D +S
Sbjct: 251 GRIKPDVVTYNTMIKGYCKAGQTQKALEKLRVMETKGLEADKITYMTMIQACYADSDFSS 310

Query: 392 AMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVD 451
            + +   M E GL +    +  +I G CK  +++    +   M+  G  P+   Y+ L+D
Sbjct: 311 CVALYQEMDEKGLQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 370

Query: 452 GYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILG 511
           GY    + E  ++LL   +  G   DV  Y  ++   CK  +V+ A   F   + NG+  
Sbjct: 371 GYAKTGSVEDAIRLLHRMIDEGFNPDVVTYSVVVNGLCKNGRVEEAMDYFQTCRFNGLAI 430

Query: 512 DSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSH 571
           +S+ Y+SL     +AG       + ++M  +        Y          N ++D F  H
Sbjct: 431 NSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCY----------NALIDAFTKH 480

Query: 572 -VVDRGLMSKHIFKEMQ 587
             VD  L    +FK M+
Sbjct: 481 GKVDEAL---ALFKRME 494



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 79/312 (25%), Positives = 144/312 (46%), Gaps = 4/312 (1%)

Query: 131 HVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKK 190
           H  S ++          +G  VF+ M      P++   TVL++  AK    +   ++  +
Sbjct: 328 HAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKTGSVEDAIRLLHR 387

Query: 191 MVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGM 250
           M+  G   ++  Y+V+++  CK+  V++         F  +  +   Y++LI    K G 
Sbjct: 388 MIDEGFNPDVVTYSVVVNGLCKNGRVEEAMDYFQTCRFNGLAINSMFYSSLIDGLGKAGR 447

Query: 251 HYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK---GATPNHVTYT 307
             EA  + + M  +G + D   YN+LI  F + G++ EA  LF+ ++   G      TYT
Sbjct: 448 VDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEALALFKRMEEEEGCDQTVYTYT 507

Query: 308 TLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEK 367
            LI G  + +  EEAL+L ++M  KG+ P      ++   LC  G++  A ++L+E+   
Sbjct: 508 ILISGMFKEHRNEEALKLWDMMIDKGITPTAACLRALSTGLCLSGKVARACKILDELAPM 567

Query: 368 KIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIA 427
            +  D   C  +IN  CK G    A K+ + + E G  +       +I+   K  + D+A
Sbjct: 568 GVILD-AACEDMINTLCKAGRIKEACKLADGITERGREVPGRIRTVMINALRKVGKADLA 626

Query: 428 KELLFGMLDAGF 439
            +L+   +  G+
Sbjct: 627 MKLMHSKIGIGY 638


>gi|357455187|ref|XP_003597874.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124359582|gb|ABD28711.2| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355486922|gb|AES68125.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 822

 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 145/556 (26%), Positives = 240/556 (43%), Gaps = 105/556 (18%)

Query: 65  KWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHD 124
           +W    VPN    +  +  +I    K    K A  + E++ L+ FL T     AL+    
Sbjct: 231 RWGNGCVPN----VVFYNVIIDGYCKKGDLKRATRVFEELKLKGFLPTLETYGALI---- 282

Query: 125 DPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMV 184
             DG      + V+            Q+ ++M V  L  ++     ++++  K  L D  
Sbjct: 283 --DGFCKAGKFQVVD-----------QLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKA 329

Query: 185 WKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIAL 244
            ++ + M ++G   +I  YN+LI+  C    + + E+ L   + + +  + F+Y  L+  
Sbjct: 330 AEMMRMMTEMGCEPDITTYNILINFSCSGGRIKEAEEFLERAKERTLLPNKFSYTPLMHA 389

Query: 245 YCKKG-------MHYE----------------------------ALAVQDRMEREGISPD 269
           YCK+G       M ++                            AL V+++M  +G+ PD
Sbjct: 390 YCKQGDYVMASDMLFKIAETGDKPDLVSYGAFIHGSVAGGEIDVALMVREKMMEKGVFPD 449

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLRE 327
              YN L+ G C++GR   A+ L  ++      P+   Y TL+DG+ R N+L++A  L E
Sbjct: 450 AQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYATLVDGFIRNNELDKATELFE 509

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT--------- 378
           V+ +KG+ PGVV YN +++ LCK G++ DA   +N+M     APD  T +T         
Sbjct: 510 VVMSKGIDPGVVGYNVMIKGLCKCGKMTDAVSYVNKMKIANHAPDEYTHSTVIDGYVKQH 569

Query: 379 --------------------------LINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYK 412
                                     LIN +CKI D + A KV   M    L  +  TY 
Sbjct: 570 DLDSALKMFGQMMKQKYKPNVVAYTSLINGFCKIADMSRAEKVFRAMQSFNLEPNVVTYT 629

Query: 413 ALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLK-------- 464
            LI GF K  + + A      ML     P+  ++ +L++G  N  N   L++        
Sbjct: 630 ILIGGFSKTGKPEKAASFFELMLMNNCLPNDTTFHYLINGLTNITNTTLLIEKNEENDRS 689

Query: 465 -LLDEF---VSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLA 520
            +LD F   +S G    ++ Y ++I   CK   VD AQ L   M   G L DSV +++L 
Sbjct: 690 LILDFFATMISEGWSQVIATYNSIIVCLCKHGMVDTAQLLQTKMLRKGFLMDSVCFSALL 749

Query: 521 YAYWRAGEPKACSDIL 536
           +   + G+ K   +I+
Sbjct: 750 HGLCQTGKSKEWRNII 765



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 104/391 (26%), Positives = 191/391 (48%), Gaps = 2/391 (0%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           +VF+++++   +P L     L++   K     +V ++  +M  +G+  N+ ++N +I A 
Sbjct: 261 RVFEELKLKGFLPTLETYGALIDGFCKAGKFQVVDQLLNEMNVMGLNVNVKVFNSIIDAK 320

Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
            K   VDK  +++  M       D+ TYN LI   C  G   EA    +R +   + P+ 
Sbjct: 321 YKYGLVDKAAEMMRMMTEMGCEPDITTYNILINFSCSGGRIKEAEEFLERAKERTLLPNK 380

Query: 271 VTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
            +Y  L+H +C++G    A  +   I   G  P+ V+Y   I G     +++ AL +RE 
Sbjct: 381 FSYTPLMHAYCKQGDYVMASDMLFKIAETGDKPDLVSYGAFIHGSVAGGEIDVALMVREK 440

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M  KGV+P    YN ++  LCK+GR   A  LL+EM +  + PD     TL++ + +  +
Sbjct: 441 MMEKGVFPDAQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYATLVDGFIRNNE 500

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
              A ++   ++  G+      Y  +I G CK  +M  A   +  M  A  +P   ++S 
Sbjct: 501 LDKATELFEVVMSKGIDPGVVGYNVMIKGLCKCGKMTDAVSYVNKMKIANHAPDEYTHST 560

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG 508
           ++DGY  +++ ++ LK+  + + +    +V  Y +LI  FCK   +  A+++F  MQ   
Sbjct: 561 VIDGYVKQHDLDSALKMFGQMMKQKYKPNVVAYTSLINGFCKIADMSRAEKVFRAMQSFN 620

Query: 509 ILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
           +  + V YT L   + + G+P+  +   + M
Sbjct: 621 LEPNVVTYTILIGGFSKTGKPEKAASFFELM 651



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 123/484 (25%), Positives = 220/484 (45%), Gaps = 28/484 (5%)

Query: 55  HIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS 114
           H P     FF WA +   +   +  ++ +++ ++ K + F   + +LE +  R+F  T  
Sbjct: 70  HNPQHGLYFFHWASTLPFSSPLNNVAYSSLLKLMVKYRLFSEIEIVLEDMKNRNFKPTLE 129

Query: 115 VLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQM-RVHNLMPHLHACTVLLN 173
            LN+++ +                 YA        +++F  +  ++N  P + A   LLN
Sbjct: 130 ALNSVICV-----------------YAEYGFVDKAVKMFYMVCELYNCFPCVVANNSLLN 172

Query: 174 SLAKDRLTDMVWKVYKKMVQLG-------VVANIHLYNVLIHACCKSSDVDKVEKLLCEM 226
            L K+   D+  ++Y KM++ G       VV N  +  +++   C    V++  KL+ + 
Sbjct: 173 CLVKNGKVDVACELYDKMLERGGDHGLDLVVDNYSIV-IVVKGLCDVGKVEEGRKLIDDR 231

Query: 227 EFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRM 286
                  ++  YN +I  YCKKG    A  V + ++ +G  P + TY +LI GFC+ G+ 
Sbjct: 232 WGNGCVPNVVFYNVIIDGYCKKGDLKRATRVFEELKLKGFLPTLETYGALIDGFCKAGKF 291

Query: 287 REARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSI 344
           +   +L  +  + G   N   + ++ID   +   +++A  +  +M   G  P + TYN +
Sbjct: 292 QVVDQLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKAAEMMRMMTEMGCEPDITTYNIL 351

Query: 345 LRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGL 404
           +   C  GRI++A   L    E+ + P+  +   L++AYCK GD   A  +  ++ E G 
Sbjct: 352 INFSCSGGRIKEAEEFLERAKERTLLPNKFSYTPLMHAYCKQGDYVMASDMLFKIAETGD 411

Query: 405 MLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLK 464
             D  +Y A IHG     E+D+A  +   M++ G  P    Y+ L+ G C K    A   
Sbjct: 412 KPDLVSYGAFIHGSVAGGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGRFPAAKL 471

Query: 465 LLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYW 524
           LL E +   L  D  +Y  L+  F +  ++D A  LF ++   GI    V Y  +     
Sbjct: 472 LLSEMLDLNLQPDAYMYATLVDGFIRNNELDKATELFEVVMSKGIDPGVVGYNVMIKGLC 531

Query: 525 RAGE 528
           + G+
Sbjct: 532 KCGK 535



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 112/419 (26%), Positives = 181/419 (43%), Gaps = 52/419 (12%)

Query: 167 ACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL---L 223
           A + LL  + K RL   +  V + M        +   N +I    +   VDK  K+   +
Sbjct: 95  AYSSLLKLMVKYRLFSEIEIVLEDMKNRNFKPTLEALNSVICVYAEYGFVDKAVKMFYMV 154

Query: 224 CEME--FKDVRADLFTYNTLIALYCKKGMHYEALAVQDRM-EREGI-SPDIVTYNS---- 275
           CE+   F  V A+    N+L+    K G    A  + D+M ER G    D+V  N     
Sbjct: 155 CELYNCFPCVVAN----NSLLNCLVKNGKVDVACELYDKMLERGGDHGLDLVVDNYSIVI 210

Query: 276 LIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKG 333
           ++ G C  G++ E R+L  D    G  PN V Y  +IDGYC+  DL+ A R+ E +  KG
Sbjct: 211 VVKGLCDVGKVEEGRKLIDDRWGNGCVPNVVFYNVIIDGYCKKGDLKRATRVFEELKLKG 270

Query: 334 VYPGVVTYNSILRKLCKEGRIRDANRLLNEMN---------------------------- 365
             P + TY +++   CK G+ +  ++LLNEMN                            
Sbjct: 271 FLPTLETYGALIDGFCKAGKFQVVDQLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKAA 330

Query: 366 -------EKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGF 418
                  E    PD  T N LIN  C  G    A +   R  E  L+ ++F+Y  L+H +
Sbjct: 331 EMMRMMTEMGCEPDITTYNILINFSCSGGRIKEAEEFLERAKERTLLPNKFSYTPLMHAY 390

Query: 419 CKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDV 478
           CK  +  +A ++LF + + G  P   SY   + G       +  L + ++ + +G+  D 
Sbjct: 391 CKQGDYVMASDMLFKIAETGDKPDLVSYGAFIHGSVAGGEIDVALMVREKMMEKGVFPDA 450

Query: 479 SVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILD 537
            +Y  L+   CKK +   A+ L + M    +  D+ +Y +L   + R  E    +++ +
Sbjct: 451 QIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYATLVDGFIRNNELDKATELFE 509



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 79/311 (25%), Positives = 145/311 (46%), Gaps = 20/311 (6%)

Query: 160 NLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKV 219
           NL P  +    L++   ++   D   ++++ ++  G+   +  YNV+I   CK   +   
Sbjct: 480 NLQPDAYMYATLVDGFIRNNELDKATELFEVVMSKGIDPGVVGYNVMIKGLCKCGKMTDA 539

Query: 220 EKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHG 279
              + +M+  +   D +T++T+I  Y K+     AL +  +M ++   P++V Y SLI+G
Sbjct: 540 VSYVNKMKIANHAPDEYTHSTVIDGYVKQHDLDSALKMFGQMMKQKYKPNVVAYTSLING 599

Query: 280 FCREGRMREARRLFRDIKGAT--PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPG 337
           FC+   M  A ++FR ++     PN VTYT LI G+ +    E+A    E+M      P 
Sbjct: 600 FCKIADMSRAEKVFRAMQSFNLEPNVVTYTILIGGFSKTGKPEKAASFFELMLMNNCLPN 659

Query: 338 VVTYNSILRKLCKEGRIRDANRLL--NEMNEKKIAPDN-------------VTCNTLINA 382
             T++ ++  L     I +   L+  NE N++ +  D               T N++I  
Sbjct: 660 DTTFHYLINGLT---NITNTTLLIEKNEENDRSLILDFFATMISEGWSQVIATYNSIIVC 716

Query: 383 YCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
            CK G   +A  ++ +ML  G ++D   + AL+HG C+  +    + ++ G L      +
Sbjct: 717 LCKHGMVDTAQLLQTKMLRKGFLMDSVCFSALLHGLCQTGKSKEWRNIISGDLTKIDFQT 776

Query: 443 YCSYSWLVDGY 453
              YS  +D Y
Sbjct: 777 AFEYSLKLDKY 787


>gi|115469638|ref|NP_001058418.1| Os06g0690900 [Oryza sativa Japonica Group]
 gi|52076717|dbj|BAD45630.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|53793285|dbj|BAD54507.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113596458|dbj|BAF20332.1| Os06g0690900 [Oryza sativa Japonica Group]
          Length = 991

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 136/535 (25%), Positives = 239/535 (44%), Gaps = 75/535 (14%)

Query: 23  KGHWAKLLNPNIASSLTSTAIHKV-LLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSH 81
           KG   K L P++      TA H   L    +    P+ + AFF+W  +    ++H+  SH
Sbjct: 41  KGRAYKRLAPSV------TAAHVADLFRADSTAPEPATALAFFEWL-ARRDGFRHTADSH 93

Query: 82  WTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYA 141
             ++H+L++ +    A    E++ +       S+LN      D                 
Sbjct: 94  AALLHLLSRRR----APAQYERLVV-------SMLNCSDTAED----------------- 125

Query: 142 NLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIH 201
            ++++ D +Q   +     L          L SLA+  +T+ + +VY ++VQ G++ +  
Sbjct: 126 -MRVSADAIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTV 184

Query: 202 LYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGM----------- 250
            YN +I + CK  D+    +    +    +  + FT N L+  YC+ G            
Sbjct: 185 TYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMM 244

Query: 251 --------HY----------------EALAVQDRMEREGISPDIVTYNSLIHGFCREGRM 286
                    Y                +AL +   M+R+G SP++  +  LI G C+ GR+
Sbjct: 245 PLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRV 304

Query: 287 REARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSI 344
            +AR LF  +   G  P+ +TY  +I GY +   + +AL+++E+M   G +P   TYN++
Sbjct: 305 GDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTL 364

Query: 345 LRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGL 404
           +  LC + +  +A  LLN   ++   P  VT   LIN YC       A+++KN+M+ +  
Sbjct: 365 IYGLCDQ-KTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKC 423

Query: 405 MLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLK 464
            LD   +  LI+   K   +  AKELL  +   G  P+  +Y+ ++DGYC     +  L+
Sbjct: 424 KLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALE 483

Query: 465 LLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
           +L      G   +   Y +L+    K +K+  A  L   MQ +GI+ + + YT+L
Sbjct: 484 VLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTL 538



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 112/406 (27%), Positives = 196/406 (48%), Gaps = 6/406 (1%)

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           LV+ Y      +    +F  M +     + ++ T+L+  L   +       ++  M + G
Sbjct: 224 LVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDG 283

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
              N+  +  LI   CKS  V     L   M    V   + TYN +I  Y K G   +AL
Sbjct: 284 CSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDAL 343

Query: 256 AVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGY 313
            +++ ME+ G  PD  TYN+LI+G C + +  EA  L  +   +G TP  VT+T LI+GY
Sbjct: 344 KIKELMEKNGCHPDDWTYNTLIYGLCDQ-KTEEAEELLNNAVKEGFTPTVVTFTNLINGY 402

Query: 314 CRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDN 373
           C A   ++ALR++  M +      +  +  ++  L K+ R+++A  LLNE++   + P+ 
Sbjct: 403 CMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNV 462

Query: 374 VTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFG 433
           +T  ++I+ YCK G    A++V   M   G   + +TY +L++G  K K++  A  LL  
Sbjct: 463 ITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTK 522

Query: 434 MLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEK 493
           M   G  P+  +Y+ L+ G C++++ +   +L +     GL  D   Y  L    CK  +
Sbjct: 523 MQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGR 582

Query: 494 VDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
              A+  ++ +   G+    V YT+L   + +AG     + +++ M
Sbjct: 583 ---AEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERM 625



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 97/345 (28%), Positives = 163/345 (47%), Gaps = 38/345 (11%)

Query: 257 VQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYC 314
           V  ++ ++G+ PD VTYN++I  +C+EG +  A R FR +   G  P   T   L+ GYC
Sbjct: 170 VYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYC 229

Query: 315 RANDL-----------------------------------EEALRLREVMAAKGVYPGVV 339
           R  +L                                    +AL L  +M   G  P V 
Sbjct: 230 RTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVR 289

Query: 340 TYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRM 399
            +  ++  LCK GR+ DA  L + M +  + P  +T N +I  Y K+G    A+K+K  M
Sbjct: 290 AFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELM 349

Query: 400 LEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNE 459
            + G   D +TY  LI+G C  K  + A+ELL   +  GF+P+  +++ L++GYC     
Sbjct: 350 EKNGCHPDDWTYNTLIYGLCDQKTEE-AEELLNNAVKEGFTPTVVTFTNLINGYCMAEKF 408

Query: 460 EALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
           +  L++ ++ +S    +D+ V+  LI    KK+++  A+ L N +  NG++ + + YTS+
Sbjct: 409 DDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSI 468

Query: 520 AYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
              Y ++G+     ++L  M R         Y S      KD ++
Sbjct: 469 IDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKL 513



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 134/548 (24%), Positives = 218/548 (39%), Gaps = 74/548 (13%)

Query: 75  KHSLQSHWTMIHILTKNKHFKSAQNMLEKIA----LRDFLSTPSVLNALVKI-------- 122
           K  LQ    +I+ L K    K A+ +L +I+    + + ++  S+++   K         
Sbjct: 424 KLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALE 483

Query: 123 ------HDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLA 176
                  D    N+   + L+      K     + +  +M+   ++P++   T LL    
Sbjct: 484 VLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQC 543

Query: 177 KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLF 236
            +   D  +++++ M Q G+  + H Y VL  A CK+   ++    +     K V     
Sbjct: 544 DEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVR---KGVALTKV 600

Query: 237 TYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD- 295
            Y TLI  + K G    A  + +RM  EG +PD  TY+ L+H  C++ R+ EA  +    
Sbjct: 601 YYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQM 660

Query: 296 -IKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRI 354
            ++G       YT LID   R    + A R+   M + G  P   TY   +   CKEGR+
Sbjct: 661 SLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRL 720

Query: 355 RDANRLLNEMNEKKIAPDNVTCNTLIN--------------------------------- 381
            DA  L+ +M  + +APD VT N LI+                                 
Sbjct: 721 EDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLL 780

Query: 382 ---------AYCKIGDTAS---------AMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
                    AY +  DT+            ++  RM++ GL     TY +LI GFCKA  
Sbjct: 781 LKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGR 840

Query: 424 MDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRA 483
           ++ A  LL  M   G SP+   Y+ L+   C+    E  L  +      G    +  YR 
Sbjct: 841 LEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRL 900

Query: 484 LIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRR 543
           L+   C +   +  + LF  +   G   D V +  L     +AG    C  +L  M +R 
Sbjct: 901 LVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEKRY 960

Query: 544 LMITLKIY 551
             I+ + Y
Sbjct: 961 CCISSQTY 968



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 95/199 (47%)

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
           R+   +   G+ P  VTYN++++  CKEG +  A+R    + E  + P+  TCN L+  Y
Sbjct: 169 RVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGY 228

Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY 443
           C+ G+   A  +   M   G   ++++Y  LI G C AK +  A  L   M   G SP+ 
Sbjct: 229 CRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNV 288

Query: 444 CSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNL 503
            ++++L+ G C          L D     G+   V  Y A+I  + K  +++ A ++  L
Sbjct: 289 RAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKEL 348

Query: 504 MQGNGILGDSVIYTSLAYA 522
           M+ NG   D   Y +L Y 
Sbjct: 349 MEKNGCHPDDWTYNTLIYG 367



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/187 (30%), Positives = 89/187 (47%)

Query: 341 YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML 400
           YN  LR L +        R+ +++ +  + PD VT NT+I +YCK GD  +A +    +L
Sbjct: 151 YNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLL 210

Query: 401 EAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEE 460
           E GL  + FT  AL+ G+C+  E+  A  L   M   G   +  SY+ L+ G C+     
Sbjct: 211 EGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVR 270

Query: 461 ALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLA 520
             L L       G   +V  +  LI   CK  +V  A+ LF+ M  NG++   + Y ++ 
Sbjct: 271 KALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMI 330

Query: 521 YAYWRAG 527
             Y + G
Sbjct: 331 VGYSKLG 337



 Score = 41.2 bits (95), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 1/74 (1%)

Query: 460 EALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
           E + ++  + V  GL  D   Y  +I+ +CK+  +  A R F L+   G+  ++    +L
Sbjct: 165 EYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNAL 224

Query: 520 AYAYWRAGE-PKAC 532
              Y R GE  KAC
Sbjct: 225 VLGYCRTGELRKAC 238


>gi|449457845|ref|XP_004146658.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g46100-like [Cucumis sativus]
 gi|449484609|ref|XP_004156929.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g46100-like [Cucumis sativus]
          Length = 501

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 123/483 (25%), Positives = 212/483 (43%), Gaps = 56/483 (11%)

Query: 60  SCAFFKWAESAVPN-----------------------------YKHSLQSHWTMIHILTK 90
           S A FKWA++  P                              +KH L +   MI  L  
Sbjct: 32  SKAMFKWAKTVTPTHVQQLIQAERDIKKALIIFDSATAEYANGFKHDLNTFSLMISKLIS 91

Query: 91  NKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGL 150
              F+ A+ +L+++       T  +L ++ +                  Y  +    D +
Sbjct: 92  ANQFRLAETLLDRMKEEKIDVTEDILLSICRA-----------------YGRIHKPLDSI 134

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
           +VF +M+  +  P   +   +L  L ++      ++ Y+ M ++G+   +   NVLI A 
Sbjct: 135 RVFHKMQDFHCKPTEKSYISVLAILVEENQLKSAFRFYRDMRKMGIPPTVTSLNVLIKAF 194

Query: 211 CKSSD-VDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
           CK+S  +DK   L   M       D +TY TLI   C+     EA  +   ME +G SP 
Sbjct: 195 CKNSGTMDKAMHLFRTMSNHGCEPDSYTYGTLINGLCRFRSIVEAKELLQEMETKGCSPS 254

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDIKGAT--PNHVTYTTLIDGYCRANDLEEALRLRE 327
           +VTY S+IHG C+   + EA RL  D+K     PN  TY++L+DG+C+      A  + E
Sbjct: 255 VVTYTSIIHGLCQLNNVDEAMRLLEDMKDKNIEPNVFTYSSLMDGFCKTGHSSRARDILE 314

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
           +M  K + P +++Y+++L  LC EG+I +A  + + M  +   PD      ++N  C + 
Sbjct: 315 LMIQKRLRPNMISYSTLLNGLCNEGKINEALEIFDRMKLQGFKPDAGLYGKIVNCLCDVS 374

Query: 388 DTASAMKVKNRMLEAGLMLDQFTYK-------ALIHGFCKAKEMDIAKELLFGMLDAGFS 440
               A    + M+  G+  ++ T+         +IHG C     + A +L   +L  G S
Sbjct: 375 RFQEAANFLDEMVLCGIKPNRITWSLHVRTHNRVIHGLCTINNSNRAFQLYLSVLTRGIS 434

Query: 441 PSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRL 500
            +  +++ L+  +CNK +     ++LDE V  G      ++  ++  FC + K   A +L
Sbjct: 435 ITVDTFNSLLKCFCNKKDLPKTSRILDEMVINGCIPQGEMWSTMVNCFCDERKACDAMKL 494

Query: 501 FNL 503
             L
Sbjct: 495 LQL 497



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 91/341 (26%), Positives = 155/341 (45%), Gaps = 47/341 (13%)

Query: 237 TYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR-EGRMREARRLFRD 295
           +Y +++A+  ++     A      M + GI P + + N LI  FC+  G M +A  LFR 
Sbjct: 151 SYISVLAILVEENQLKSAFRFYRDMRKMGIPPTVTSLNVLIKAFCKNSGTMDKAMHLFRT 210

Query: 296 IK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGR 353
           +   G  P+  TY TLI+G CR   + EA  L + M  KG  P VVTY SI+  LC+   
Sbjct: 211 MSNHGCEPDSYTYGTLINGLCRFRSIVEAKELLQEMETKGCSPSVVTYTSIIHGLCQLNN 270

Query: 354 IRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKA 413
           + +A RLL +M +K I P+  T ++L++ +CK G ++ A  +   M++  L  +  +Y  
Sbjct: 271 VDEAMRLLEDMKDKNIEPNVFTYSSLMDGFCKTGHSSRARDILELMIQKRLRPNMISYST 330

Query: 414 LIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVD---------------------- 451
           L++G C   +++ A E+   M   GF P    Y  +V+                      
Sbjct: 331 LLNGLCNEGKINEALEIFDRMKLQGFKPDAGLYGKIVNCLCDVSRFQEAANFLDEMVLCG 390

Query: 452 --------------------GYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
                               G C  NN     +L    ++RG+ + V  + +L++ FC K
Sbjct: 391 IKPNRITWSLHVRTHNRVIHGLCTINNSNRAFQLYLSVLTRGISITVDTFNSLLKCFCNK 450

Query: 492 EKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKAC 532
           + +    R+ + M  NG +    +++++   +    E KAC
Sbjct: 451 KDLPKTSRILDEMVINGCIPQGEMWSTMVNCF--CDERKAC 489



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 69/272 (25%), Positives = 116/272 (42%), Gaps = 12/272 (4%)

Query: 305 TYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE-GRIR---DANRL 360
           T++ +I     AN      RL E +  +     +     IL  +C+  GRI    D+ R+
Sbjct: 81  TFSLMISKLISANQF----RLAETLLDRMKEEKIDVTEDILLSICRAYGRIHKPLDSIRV 136

Query: 361 LNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCK 420
            ++M +    P   +  +++    +     SA +    M + G+     +   LI  FCK
Sbjct: 137 FHKMQDFHCKPTEKSYISVLAILVEENQLKSAFRFYRDMRKMGIPPTVTSLNVLIKAFCK 196

Query: 421 -AKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
            +  MD A  L   M + G  P   +Y  L++G C   +     +LL E  ++G    V 
Sbjct: 197 NSGTMDKAMHLFRTMSNHGCEPDSYTYGTLINGLCRFRSIVEAKELLQEMETKGCSPSVV 256

Query: 480 VYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
            Y ++I   C+   VD A RL   M+   I  +   Y+SL   + + G      DIL+ M
Sbjct: 257 TYTSIIHGLCQLNNVDEAMRLLEDMKDKNIEPNVFTYSSLMDGFCKTGHSSRARDILELM 316

Query: 540 YRRRL---MITLKIYRSFSASYAKDNEILDLF 568
            ++RL   MI+     +   +  K NE L++F
Sbjct: 317 IQKRLRPNMISYSTLLNGLCNEGKINEALEIF 348


>gi|357115764|ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 867

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 118/442 (26%), Positives = 207/442 (46%), Gaps = 5/442 (1%)

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
           Y+ L   ++  ++F +M    L+P +     L++SL K + +    +++  +   G   +
Sbjct: 352 YSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPD 411

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
           I  Y++L+H          +  L   M    + AD   +N LI  + K+GM  EAL +  
Sbjct: 412 IISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFT 471

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREA-RRLFRDIK-GATPNHVTYTTLIDGYCRAN 317
            M  +G+SP++VTY ++I   CR GR+ +A  +L + I  G  PN V Y +LI G+C   
Sbjct: 472 EMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHG 531

Query: 318 DLEEALRLREVMAAKGV-YPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTC 376
           DL +A  L   M  +G+  P +  ++SI+  LC EGR+ +A  + N +      PD  T 
Sbjct: 532 DLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTF 591

Query: 377 NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD 436
           N+LI+ YC +G    A  V + M+ AG   D  TY  LI+G+ K+  +D    L   ML 
Sbjct: 592 NSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLC 651

Query: 437 AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDY 496
               P+  +YS ++DG        A  K+  E +  G  + +S Y  +++  C+    D 
Sbjct: 652 KRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDE 711

Query: 497 AQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSA 556
           A  LF+ +    +  +  I  ++ +A ++    +   D+   +    L+     Y     
Sbjct: 712 AITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFASVSASGLVPNASTYGVMII 771

Query: 557 SYAKDNEI--LDLFWSHVVDRG 576
           +  K+  +   D+ +S +   G
Sbjct: 772 NLLKEGSVEEADIMFSSMEKTG 793



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 123/455 (27%), Positives = 195/455 (42%), Gaps = 18/455 (3%)

Query: 146 TQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDR-----------LTDMVWKVYKKMVQL 194
           T+D   +FD++   +   H  A    L +LA+ R              +  ++ ++    
Sbjct: 99  TEDAHHLFDELLRQDTPVHGRALNGFLAALARARDSVACSDAPALAVALFNRICREEAGP 158

Query: 195 GVVA-NIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYE 253
            VV   +H Y +L+  CC++   D        +    +R D    NT +   C      E
Sbjct: 159 RVVPLTVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVTNTFLKCLCYAKRTDE 218

Query: 254 ALA-VQDRMEREGISPDIVTYNSLIHGFCREGRMREA-RRLFRDIKG--ATPNHVTYTTL 309
           AL+ +  RM   G  PD  +YN++I   C   R +EA   L R  KG   +P+ V+YT +
Sbjct: 219 ALSMLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMV 278

Query: 310 IDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI 369
           I G     ++ +A  L   M  KGV P VVTYNSI+  LCK   +  A  +L +M +  I
Sbjct: 279 IHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSI 338

Query: 370 APDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKE 429
            PD VT   +I+ Y  +G    A K+   M   GL+ D  T+ +L+   CK K    A E
Sbjct: 339 QPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAE 398

Query: 430 LLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFC 489
           +   +   G  P   SYS L+ GY  +     +  L       G+  D   +  LI    
Sbjct: 399 IFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHA 458

Query: 490 KKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLK 549
           K+  +D A  +F  M+G G+  + V Y ++  A  R G      + L  M    L     
Sbjct: 459 KRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTV 518

Query: 550 IYRSFSASYAKDNEILDL--FWSHVVDRGLMSKHI 582
           +Y S    +    +++      S ++D+G+   +I
Sbjct: 519 VYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNI 553



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 114/447 (25%), Positives = 194/447 (43%), Gaps = 51/447 (11%)

Query: 179 RLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKD-VRADLFT 237
           R  + +  +  +M +LG V +   YN +I + C  S   +   +L  M   D    D+ +
Sbjct: 215 RTDEALSMLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVS 274

Query: 238 YNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI- 296
           Y  +I     +G   +A  + + M ++G+ P++VTYNS++H  C+   M +A  + R + 
Sbjct: 275 YTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMF 334

Query: 297 -KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK----- 350
                P+ VTYT +I GY      +EA ++ + M  +G+ P +VT+NS++  LCK     
Sbjct: 335 DNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSK 394

Query: 351 ------------------------------EGRIRDANRLLNEMNEKKIAPDNVTCNTLI 380
                                         EGR  D N L + M +  I  D+   N LI
Sbjct: 395 EAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILI 454

Query: 381 NAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFS 440
           NA+ K G    A+ +   M   G+  +  TY  +I   C+   +  A E L  M+  G  
Sbjct: 455 NAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLK 514

Query: 441 PSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLC-VDVSVYRALIRRFCKKEKVDYAQR 499
           P+   Y  L+ G+C   +     +L+ E + +G+   +++ + ++I   C + +V  AQ 
Sbjct: 515 PNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQD 574

Query: 500 LFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYA 559
           +FNL+   G   D   + SL   Y   G+      +LD M        +  Y +    Y 
Sbjct: 575 VFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGY- 633

Query: 560 KDNEILDLFWSHVVDRGLMSKHIFKEM 586
                   F S  +D GL+   +F+EM
Sbjct: 634 --------FKSGRIDDGLI---LFREM 649



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 94/370 (25%), Positives = 177/370 (47%), Gaps = 5/370 (1%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAK-DRLTDMVWKV 187
           +SH  + L+  +A   M  + L +F +MR   + P++     ++ +L +  RL D + K+
Sbjct: 446 DSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKL 505

Query: 188 YKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDV-RADLFTYNTLIALYC 246
             +M+ +G+  N  +Y+ LI   C   D+ K ++L+ EM  + + R ++  ++++I   C
Sbjct: 506 -SQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLC 564

Query: 247 KKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHV 304
            +G    A  V + +   G  PDI T+NSLI G+C  G+M +A  +   +   G  P+ V
Sbjct: 565 NEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVV 624

Query: 305 TYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM 364
           TY+TLI+GY ++  +++ L L   M  K V P  VTY+ +L  L + GR   A ++ +EM
Sbjct: 625 TYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEM 684

Query: 365 NEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEM 424
            E   A    T   ++   C+   T  A+ + +++    L  +      +IH   K K  
Sbjct: 685 IESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRR 744

Query: 425 DIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRAL 484
           + A +L   +  +G  P+  +Y  ++     + + E    +       G      +   +
Sbjct: 745 EEAHDLFASVSASGLVPNASTYGVMIINLLKEGSVEEADIMFSSMEKTGCAPSSRLLNDI 804

Query: 485 IRRFCKKEKV 494
           IR   +K ++
Sbjct: 805 IRMLLQKGEI 814



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 60/275 (21%), Positives = 112/275 (40%), Gaps = 4/275 (1%)

Query: 115 VLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNS 174
           V N ++ I D PD      + L+  Y  +        V D M      P +   + L+N 
Sbjct: 575 VFNLVIHIGDRPD--IFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLING 632

Query: 175 LAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRAD 234
             K    D    ++++M+   V      Y++++    ++      +K+  EM        
Sbjct: 633 YFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMS 692

Query: 235 LFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR 294
           + TY  ++   C+     EA+ +  ++    +  +I   N++IH   +  R  EA  LF 
Sbjct: 693 ISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFA 752

Query: 295 DIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEG 352
            +   G  PN  TY  +I    +   +EEA  +   M   G  P     N I+R L ++G
Sbjct: 753 SVSASGLVPNASTYGVMIINLLKEGSVEEADIMFSSMEKTGCAPSSRLLNDIIRMLLQKG 812

Query: 353 RIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
            I  A   +++++   I+ +  T + LI+ +   G
Sbjct: 813 EIVKAGYYMSKVDGTIISLEASTTSLLISLFASKG 847



 Score = 38.9 bits (89), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 31/143 (21%), Positives = 62/143 (43%)

Query: 146 TQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNV 205
           T + + +F ++   NL   +     ++++L K +  +    ++  +   G+V N   Y V
Sbjct: 709 TDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFASVSASGLVPNASTYGV 768

Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
           +I    K   V++ + +   ME           N +I +  +KG   +A     +++   
Sbjct: 769 MIINLLKEGSVEEADIMFSSMEKTGCAPSSRLLNDIIRMLLQKGEIVKAGYYMSKVDGTI 828

Query: 266 ISPDIVTYNSLIHGFCREGRMRE 288
           IS +  T + LI  F  +GR RE
Sbjct: 829 ISLEASTTSLLISLFASKGRYRE 851


>gi|358347154|ref|XP_003637626.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503561|gb|AES84764.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 989

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 141/550 (25%), Positives = 231/550 (42%), Gaps = 68/550 (12%)

Query: 107 RDFLSTPSVLNALVKIHDD----PDGNSHVLSWLVIFYANLKMTQDGLQV----FDQMRV 158
           R F  TP       +IH D    P   +H+          L +T D        F  MR 
Sbjct: 28  RFFYPTPITRTFSSQIHKDSIFIPPTKTHLYVSFFCTLIRLYLTHDRFSTASATFSHMRA 87

Query: 159 HNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDK 218
             L+P L     LL       L   V  +Y  M+  GVV ++   NVL+H+ CK  D+D 
Sbjct: 88  LGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDMLFCGVVPDVFSVNVLVHSLCKVGDLDL 147

Query: 219 VEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIH 278
               L   +  D+  D  TYNT+I  +C+KG+  +   +   M + G+  D +T N L+ 
Sbjct: 148 ALGYLRNNDVVDI--DNVTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVK 205

Query: 279 GFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYP 336
           G+CR G ++ A  +  ++   G T + +   TLIDGYC A  + +A  L E      V  
Sbjct: 206 GYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGYCEAVLMSQATELIENSWRSDVKI 265

Query: 337 GVVTYNSILRKLCKEGRIRDANRLLNEM------------------NE-KKIAPDNVTCN 377
            +VTYN++L+  CK G +  A  L NE+                  NE K + P  VT  
Sbjct: 266 DIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYT 325

Query: 378 TLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA 437
           TLI AYCK      +  +  +M+  G+M D  T  ++++GFC+  ++  A  L   M + 
Sbjct: 326 TLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEM 385

Query: 438 GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDV------------------- 478
           G  P++ SY+ +++             L  + V RG+  D+                   
Sbjct: 386 GLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEA 445

Query: 479 ----------------SVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYA 522
                             Y AL+  +CK  K++ A+ +   M+   +  + + ++S+   
Sbjct: 446 EEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIING 505

Query: 523 YWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASY--AKDNEILDLFWSHVVDRGLMSK 580
           Y + G      D+L +M +R +M    +Y      Y  A + ++ D F   +  R L   
Sbjct: 506 YAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEES 565

Query: 581 HIFKEMQLRN 590
           ++  ++ L N
Sbjct: 566 NVIFDILLNN 575



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 114/408 (27%), Positives = 202/408 (49%), Gaps = 29/408 (7%)

Query: 168 CTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEM- 226
           C  +L S A    T+++   ++  V++ +V     YN L+ A CK+ D+ + E L  E+ 
Sbjct: 243 CEAVLMSQA----TELIENSWRSDVKIDIVT----YNTLLKAFCKTGDLTRAESLFNEIL 294

Query: 227 ------------------EFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISP 268
                             E K+++  L TY TLIA YCK     E+ ++  +M   GI P
Sbjct: 295 GFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMP 354

Query: 269 DIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLR 326
           D+VT +S+++GFCR G++ EA  LFR++   G  PNHV+Y T+I+   ++  + EA  L+
Sbjct: 355 DVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQ 414

Query: 327 EVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKI 386
             M  +G+   +VT  +++  L K G+ ++A  +   + +  +AP+ VT + L++ YCK+
Sbjct: 415 SQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKL 474

Query: 387 GDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSY 446
           G    A  V  +M +  +  +  T+ ++I+G+ K   +  A ++L  M+     P+   Y
Sbjct: 475 GKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVY 534

Query: 447 SWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQG 506
           + L+DGY     ++       E  SR L     ++  L+    +  ++D A+ L   M  
Sbjct: 535 AILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYS 594

Query: 507 NGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSF 554
            GI  D V Y SL   Y++ G   A   I+ +M  + +   +  Y + 
Sbjct: 595 KGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNAL 642



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 113/403 (28%), Positives = 194/403 (48%), Gaps = 17/403 (4%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           V  Q  + NL P L   T L+ +  K    +    +YKKM+  G++ ++   + +++  C
Sbjct: 308 VVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFC 367

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           +   + +   L  EM    +  +  +Y T+I    K G   EA  +Q +M   GIS DIV
Sbjct: 368 RHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIV 427

Query: 272 TYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVM 329
           T  +++ G  + G+ +EA  +F  I      PN VTY+ L+DGYC+   +E A  + + M
Sbjct: 428 TCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKM 487

Query: 330 AAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
             + V P V+T++SI+    K+G +  A  +L EM ++ + P+ +    LI+ Y K G+ 
Sbjct: 488 EKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQ 547

Query: 390 ASA----MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
             A     ++K+R LE         +  L++   +   MD A+ L+  M   G  P   +
Sbjct: 548 DVADDFCKEMKSRRLEE----SNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVN 603

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVD---YAQRLFN 502
           Y+ L+DGY  + N+ A L ++ E   + +  DV  Y ALI+   +  K D      R+  
Sbjct: 604 YASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYVCSRMIE 663

Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
           L    G+  D + Y ++   Y   G+ +   DIL++M    +M
Sbjct: 664 L----GLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIM 702



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 118/442 (26%), Positives = 204/442 (46%), Gaps = 21/442 (4%)

Query: 145 MTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYN 204
           +   G  +  +M    L      C +L+    +  L      V   +V  GV  ++   N
Sbjct: 177 LVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLN 236

Query: 205 VLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKG-------MHYEALAV 257
            LI   C++  + +  +L+      DV+ D+ TYNTL+  +CK G       +  E L  
Sbjct: 237 TLIDGYCEAVLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGF 296

Query: 258 ---QDRM---------EREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNH 303
              +DR+         E + + P +VTY +LI  +C+   + E+  L++ +   G  P+ 
Sbjct: 297 WKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDV 356

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
           VT ++++ G+CR   L EA  L   M   G+ P  V+Y +I+  L K GR+ +A  L ++
Sbjct: 357 VTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQ 416

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
           M  + I+ D VTC T+++   K+G T  A +V   +L+  L  +  TY AL+ G+CK  +
Sbjct: 417 MVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGK 476

Query: 424 MDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRA 483
           M++A+ +L  M      P+  ++S +++GY  K      + +L E V R +  +  VY  
Sbjct: 477 MELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAI 536

Query: 484 LIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRR 543
           LI  + K  + D A      M+   +   +VI+  L     R G       ++ DMY + 
Sbjct: 537 LIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKG 596

Query: 544 LMITLKIYRSFSASYAKDNEIL 565
           +   +  Y S    Y K+   L
Sbjct: 597 IDPDIVNYASLIDGYFKEGNQL 618



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 118/447 (26%), Positives = 198/447 (44%), Gaps = 43/447 (9%)

Query: 115 VLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNS 174
           VL  + K H  P  N    S ++  YA   M    + V  +M   N+MP+     +L++ 
Sbjct: 483 VLQKMEKEHVPP--NVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDG 540

Query: 175 LAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRAD 234
             K    D+     K+M    +  +  ++++L++   +   +D+   L+ +M  K +  D
Sbjct: 541 YFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPD 600

Query: 235 LFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR 294
           +  Y +LI  Y K+G    AL++   M+ + I  D+V YN+LI G  R G+        R
Sbjct: 601 IVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYVCSR 660

Query: 295 DIK-GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEG- 352
            I+ G  P+ +TY T+I+ YC     E+AL +   M + G+ P  VTYN ++  LCK G 
Sbjct: 661 MIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGF 720

Query: 353 ---------------RIRDANRL--------------------LNEMNEKKIAPDNVTCN 377
                          R   A+++                    L+EM ++ I+ D VT N
Sbjct: 721 VPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELKRQKVVLDEMVKRGISADLVTYN 780

Query: 378 TLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKA----KEMDIAKELLFG 433
            LI  YC       A+K  ++M   G+  +  TY  L+ G   A    + M+  ++L+  
Sbjct: 781 ALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSE 840

Query: 434 MLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEK 493
           M + G  P+  +Y  LV GY    N +  + L  E +++G    +  Y  LI  + K  K
Sbjct: 841 MNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGK 900

Query: 494 VDYAQRLFNLMQGNGILGDSVIYTSLA 520
           +  A+ L N +   G + +S  Y  L 
Sbjct: 901 MIEARELLNDLLTKGRIPNSFTYDILT 927



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 138/561 (24%), Positives = 244/561 (43%), Gaps = 43/561 (7%)

Query: 43  IHKVLLNLYNCCHIPSLSCAFFKWAESAV---PNYKHSLQ----SHWTMIHILTKNKHFK 95
           ++ ++ ++  C  I    C   K  E+AV     Y+  L     S+ T+I+ L K+    
Sbjct: 349 MNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVM 408

Query: 96  SAQNMLEKIALR----DFLSTPSVLNALVKIHDDPDG--------------NSHVLSWLV 137
            A N+  ++ +R    D ++  +V++ L K+    +               N    S L+
Sbjct: 409 EAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALL 468

Query: 138 IFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVV 197
             Y  L   +    V  +M   ++ P++   + ++N  AK  +      V ++MVQ  V+
Sbjct: 469 DGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVM 528

Query: 198 ANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAV 257
            N  +Y +LI    K+ + D  +    EM+ + +      ++ L+    + G   EA ++
Sbjct: 529 PNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSL 588

Query: 258 QDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGATPNH--VTYTTLIDGYCR 315
              M  +GI PDIV Y SLI G+ +EG    A  + +++K        V Y  LI G  R
Sbjct: 589 IIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLR 648

Query: 316 ANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVT 375
               +        M   G+ P  +TYN+I+   C +G+  DA  +LNEM    I P+ VT
Sbjct: 649 LGKYDPRYVCSR-MIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVT 707

Query: 376 CNTLINAYCKIGDTASAM------KVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKE 429
            N LI   CK G   + +      K  +R  +A  +L Q   K +  G     E+   K 
Sbjct: 708 YNILIGGLCKTGFVPTPITHKFLVKAYSRSEKADKIL-QIHEKLVASGL----ELKRQKV 762

Query: 430 LLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFC 489
           +L  M+  G S    +Y+ L+ GYC  ++ E  LK   +    G+  +++ Y  L+    
Sbjct: 763 VLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLS 822

Query: 490 K----KEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
                +E ++  ++L + M   G++ ++  Y  L   Y R G  K    +  +M  +  +
Sbjct: 823 NAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFV 882

Query: 546 ITLKIYRSFSASYAKDNEILD 566
            TLK Y    + YAK  ++++
Sbjct: 883 PTLKTYNVLISDYAKSGKMIE 903



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 95/395 (24%), Positives = 184/395 (46%), Gaps = 40/395 (10%)

Query: 134 SWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAK-DRLTDMVWKVYKKMV 192
           + L+  Y      ++   ++ +M ++ +MP +  C+ +L    +  +LT+    ++++M 
Sbjct: 325 TTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAV-LFREMY 383

Query: 193 QLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHY 252
           ++G+  N   Y  +I++  KS  V +   L  +M  + +  D+ T  T++    K G   
Sbjct: 384 EMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTK 443

Query: 253 EALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKG--ATPNHVTYTTLI 310
           EA  V + + +  ++P+ VTY++L+ G+C+ G+M  A  + + ++     PN +T++++I
Sbjct: 444 EAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSII 503

Query: 311 DGYCRANDLEEALRLREVMAAKGVYPGVVTY------------NSILRKLCKE------- 351
           +GY +   L +A+ +   M  + V P  + Y              +    CKE       
Sbjct: 504 NGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLE 563

Query: 352 ----------------GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKV 395
                           GR+ +A  L+ +M  K I PD V   +LI+ Y K G+  +A+ +
Sbjct: 564 ESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSI 623

Query: 396 KNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCN 455
              M E  +  D   Y ALI G  +  + D  + +   M++ G +P   +Y+ +++ YC 
Sbjct: 624 VQEMKEKNIRFDVVAYNALIKGLLRLGKYD-PRYVCSRMIELGLAPDCITYNTIINTYCI 682

Query: 456 KNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCK 490
           K   E  L +L+E  S G+  +   Y  LI   CK
Sbjct: 683 KGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCK 717



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 90/323 (27%), Positives = 152/323 (47%), Gaps = 49/323 (15%)

Query: 183 MVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFK-DVRADLFTYNTL 241
           +V ++ +K ++  VVA    YN LI    +    D   + +C    +  +  D  TYNT+
Sbjct: 623 IVQEMKEKNIRFDVVA----YNALIKGLLRLGKYD--PRYVCSRMIELGLAPDCITYNTI 676

Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREG----------------R 285
           I  YC KG   +AL + + M+  GI P+ VTYN LI G C+ G                R
Sbjct: 677 INTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGFVPTPITHKFLVKAYSR 736

Query: 286 MREARRLFR----------DIK------------GATPNHVTYTTLIDGYCRANDLEEAL 323
             +A ++ +          ++K            G + + VTY  LI GYC  + +E+AL
Sbjct: 737 SEKADKILQIHEKLVASGLELKRQKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKAL 796

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEG----RIRDANRLLNEMNEKKIAPDNVTCNTL 379
           +    M   G+ P + TYN++L  L   G     + +  +L++EMNE+ + P+  T + L
Sbjct: 797 KTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDIL 856

Query: 380 INAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGF 439
           ++ Y ++G+    + +   M+  G +    TY  LI  + K+ +M  A+ELL  +L  G 
Sbjct: 857 VSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEARELLNDLLTKGR 916

Query: 440 SPSYCSYSWLVDGYCNKNNEEAL 462
            P+  +Y  L  G+ N + E  +
Sbjct: 917 IPNSFTYDILTCGWLNLSYEPEI 939


>gi|297807255|ref|XP_002871511.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297317348|gb|EFH47770.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1202

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 136/523 (26%), Positives = 232/523 (44%), Gaps = 35/523 (6%)

Query: 88   LTKNKHFKSAQNMLEKIALRDFLSTP----SVLNALVKI--------------HDDPDGN 129
            L K K F+   N+   I   DF  +       + A VK+              HD     
Sbjct: 527  LVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRISPT 586

Query: 130  SHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYK 189
              + + L+     ++  +D  Q+FD+M    L+P L     L++   KD   +  +KV +
Sbjct: 587  VFIYNVLIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNTLIDGYCKDGNPEKSFKVRE 646

Query: 190  KMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKG 249
            +M    +  ++  +N L+    K+  V+  E +L EM+ +    D FT++ L   Y    
Sbjct: 647  RMKADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSND 706

Query: 250  MHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF-RDI-KGATPNHVTYT 307
                AL V +     G+  +  T + L++  C+EG++ +A  +  R++ KG  PN V Y 
Sbjct: 707  KADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYN 766

Query: 308  TLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEK 367
            T+IDGY R  DL  A    + M  +G+ P  + YN ++R  C+ G + +A + +N+M  K
Sbjct: 767  TMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLK 826

Query: 368  KIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIA 427
             ++P   T N LI  Y +  +      +   M + G M +  +Y  LI+  CK  ++  A
Sbjct: 827  GVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEA 886

Query: 428  KELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRR 487
            + +   M D G SP+   Y+ L+DG C+K   E   +  +E   +G+ +++  Y  LI  
Sbjct: 887  QIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDG 946

Query: 488  FCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMIT 547
                 K+  A+ +   +   G+  D   Y SL   Y  AG  + C  + ++M    +  T
Sbjct: 947  LSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKPT 1006

Query: 548  LKIYRSFSASYAKDNEILDLFWSHVVDRGL-MSKHIFKEMQLR 589
            LK Y               L  S     G+ ++K IF EM L+
Sbjct: 1007 LKTYH--------------LLISLCTKEGIELTKKIFGEMSLQ 1035



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 117/464 (25%), Positives = 216/464 (46%), Gaps = 42/464 (9%)

Query: 131 HVLSWLV--IFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           H  S+L+  +     KM  +   +F  +R   + P   + T+LL+ L K +   +   V+
Sbjct: 481 HDFSYLLLSVLLNESKMISEAADLFFALRNEGIFPSSDSLTLLLDHLVKTKQFRVTINVF 540

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
             +++     +  +Y   I A  K SDV K                              
Sbjct: 541 LNILESDFRPSKFMYGKAIQAAVKLSDVGK------------------------------ 570

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTY 306
                 L + +RM+ + ISP +  YN LI G C+  +M++A +LF ++  +   P+ +TY
Sbjct: 571 -----GLELFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARRLLPSLITY 625

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
            TLIDGYC+  + E++ ++RE M A  + P ++T+N++L+ L K G + DA  +L EM +
Sbjct: 626 NTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKD 685

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
           +   PD  T + L + Y       +A+ V    +++GL ++ +T   L++  CK  +++ 
Sbjct: 686 QGFVPDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIEK 745

Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
           A+E+L   +  G  P+   Y+ ++DGY  K +       +D    +G+  D   Y  LIR
Sbjct: 746 AEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIR 805

Query: 487 RFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMI 546
            FC+   ++ A++  N M+  G+      Y  L   Y R  E   C D+L +M     M 
Sbjct: 806 TFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMP 865

Query: 547 TLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKEMQLRN 590
            +  Y +      K +++L+   + +V R +  + +   +++ N
Sbjct: 866 NVVSYGTLINCLCKGSKLLE---AQIVKRDMEDRGVSPNVRIYN 906



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 109/407 (26%), Positives = 197/407 (48%), Gaps = 10/407 (2%)

Query: 136  LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
            L+  +  L   ++  Q  ++M++  + P +    +L+    +    D  + + K+M   G
Sbjct: 803  LIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNG 862

Query: 196  VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
             + N+  Y  LI+  CK S + + + +  +ME + V  ++  YN LI   C KG   +A 
Sbjct: 863  TMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAF 922

Query: 256  AVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGY 313
               + M ++GI  ++VTYN+LI G    G++ EA  +  +I  KG  P+  TY +LI GY
Sbjct: 923  RFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGY 982

Query: 314  CRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDN 373
              A +++  + L E M   G+ P + TY+ +L  LC +  I    ++  EM+   + PD 
Sbjct: 983  RFAGNVQRCIALYEEMKTSGIKPTLKTYH-LLISLCTKEGIELTKKIFGEMS---LQPDL 1038

Query: 374  VTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFG 433
            +  N +++ Y   GD   A  ++ +M+E  + LD+ TY +LI G  K  ++   + L+  
Sbjct: 1039 LVYNGVLHCYAVHGDMDKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDE 1098

Query: 434  MLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEK 493
            M      P   +Y  +V G+C   +         E   +GL +DV +   L+    ++ +
Sbjct: 1099 MKAREMEPEADTYDIIVKGHCEMKDYMGAYVWYREMQEKGLLLDVCIGDELVSGLKEEWR 1158

Query: 494  VDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMY 540
               A+ + + M G   LGD ++   L+ A  R+ E + C  +L D Y
Sbjct: 1159 SKEAENVISEMNGRK-LGDVIVDEDLS-ATERSFENQEC--VLQDKY 1201



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 124/540 (22%), Positives = 222/540 (41%), Gaps = 85/540 (15%)

Query: 73   NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHV 132
            N + SL +  T++  L K    + A+N+L ++  + F+               PD  +  
Sbjct: 652  NIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFV---------------PD--AFT 694

Query: 133  LSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMV 192
             S L   Y++       L V++      L  + + C++LLN+L K+   +   ++  + +
Sbjct: 695  FSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEILGREM 754

Query: 193  QLGVVANIHLYNV-----------------------------------LIHACCKSSDVD 217
              G+V N  LYN                                    LI   C+  D++
Sbjct: 755  AKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDME 814

Query: 218  KVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLI 277
              E+ + +M+ K V   + TYN LI  Y +K    +   +   ME  G  P++V+Y +LI
Sbjct: 815  NAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLI 874

Query: 278  HGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVY 335
            +  C+  ++ EA+ + RD+  +G +PN   Y  LIDG C    +E+A R  E M  KG+ 
Sbjct: 875  NCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIE 934

Query: 336  PGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKV 395
              +VTYN+++  L   G++ +A  +L E++ K + PD  T N+LI+ Y   G+    + +
Sbjct: 935  LNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIAL 994

Query: 396  KNRMLEAG-------------------------------LMLDQFTYKALIHGFCKAKEM 424
               M  +G                               L  D   Y  ++H +    +M
Sbjct: 995  YEEMKTSGIKPTLKTYHLLISLCTKEGIELTKKIFGEMSLQPDLLVYNGVLHCYAVHGDM 1054

Query: 425  DIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRAL 484
            D A  L   M++        +Y+ L+ G         +  L+DE  +R +  +   Y  +
Sbjct: 1055 DKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMKAREMEPEADTYDII 1114

Query: 485  IRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL 544
            ++  C+ +    A   +  MQ  G+L D  I   L          K   +++ +M  R+L
Sbjct: 1115 VKGHCEMKDYMGAYVWYREMQEKGLLLDVCIGDELVSGLKEEWRSKEAENVISEMNGRKL 1174



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 76/330 (23%), Positives = 135/330 (40%), Gaps = 60/330 (18%)

Query: 43   IHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLE 102
            I+ +L++   CC    +  AF    E      + +L ++ T+I  L+ N     A++ML 
Sbjct: 904  IYNMLID--GCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLL 961

Query: 103  KIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLM 162
            +I+ +                  PD         V  Y +L            +  +   
Sbjct: 962  EISRKGL---------------KPD---------VFTYNSL------------ISGYRFA 985

Query: 163  PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
             ++  C  L                Y++M   G+   +  Y++LI  C K   ++  +K+
Sbjct: 986  GNVQRCIAL----------------YEEMKTSGIKPTLKTYHLLISLCTKEG-IELTKKI 1028

Query: 223  LCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR 282
              EM    ++ DL  YN ++  Y   G   +A  +Q +M  + I  D  TYNSLI G  +
Sbjct: 1029 FGEM---SLQPDLLVYNGVLHCYAVHGDMDKAFNLQKQMIEKSIGLDKTTYNSLILGQLK 1085

Query: 283  EGRMREARRLFRDIKG--ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVT 340
             G++ E R L  ++K     P   TY  ++ G+C   D   A      M  KG+   V  
Sbjct: 1086 VGKLCEVRSLIDEMKAREMEPEADTYDIIVKGHCEMKDYMGAYVWYREMQEKGLLLDVCI 1145

Query: 341  YNSILRKLCKEGRIRDANRLLNEMNEKKIA 370
             + ++  L +E R ++A  +++EMN +K+ 
Sbjct: 1146 GDELVSGLKEEWRSKEAENVISEMNGRKLG 1175


>gi|224086982|ref|XP_002308024.1| predicted protein [Populus trichocarpa]
 gi|222854000|gb|EEE91547.1| predicted protein [Populus trichocarpa]
          Length = 789

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 144/575 (25%), Positives = 235/575 (40%), Gaps = 81/575 (14%)

Query: 29  LLNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHIL 88
            L+P I +S+     +            P L   FF WA     N+K      W    ++
Sbjct: 56  FLSPKIVTSIIQNPPN------------PQLGFRFFIWAS----NFKRF--RAWESCDLI 97

Query: 89  TKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQD 148
           T        QN LE        +  ++ N  +K+H+D          L+  Y  + +T  
Sbjct: 98  T---DLLINQNGLELYCQ----TLEALKNGGIKVHND------AFFVLIKVYLKMGLTDK 144

Query: 149 GLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIH 208
            ++ F  MR  +  P ++   ++L+ L +     +   VY +M++L  + N+  +++LI 
Sbjct: 145 AMETFGSMRDFDCTPDVYTYNMILDVLIQKNFLLLALTVYTRMMKLNCLPNVATFSILID 204

Query: 209 ACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISP 268
             CKS +V     L  EM  + +  D FTY  +I+  C+     +A  + D+M+  G+ P
Sbjct: 205 GLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSGVGP 264

Query: 269 DIVTYNSLIHGFCREGRMREARRLFR--DIKGATPNHVTYTTLIDGYCRANDLEEALRLR 326
           D VT N+L++GFC   R+ EA  L R  +  G   +   Y+ LI G  RA   E+   L 
Sbjct: 265 DFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQLLY 324

Query: 327 EVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKI 386
             M    V P V  Y  +++ L + G++RDA  LLNEM E  + PD V  N LI  +C +
Sbjct: 325 RKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVCYNVLIKGFCDM 384

Query: 387 GDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSY 446
           G  + A  ++  +       +  TY  LI G C+      A+E+   M   G  PS  ++
Sbjct: 385 GLLSEARSLQLEISRHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVTF 444

Query: 447 SWLVDGYCNKNNEE--------------------------------ALLKLLDEFVSRGL 474
           + L+DG C     E                                +L K++++    GL
Sbjct: 445 NSLIDGLCKTGQLEKAHLLFYKMEIGRNPSLFLRLSQGPSHVLDSASLQKMVEQLCDSGL 504

Query: 475 ----------------CVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTS 518
                              +  Y  L+  FCK    + A +LF  MQ  G+  D+V Y +
Sbjct: 505 IHKAYRILMQLADSGDAPGIYTYNILVNGFCKLGNFNGAYKLFREMQFKGLSPDTVTYGT 564

Query: 519 LAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRS 553
           L     R    +    + D M +        +YR+
Sbjct: 565 LINGLLRFQREEDAYKVFDQMEKNGCTPDAAVYRT 599



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 102/408 (25%), Positives = 183/408 (44%), Gaps = 16/408 (3%)

Query: 144 KMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLY 203
           K  +D   ++ +M   N+ P ++  T+++  LA+        ++  +M + GVV +   Y
Sbjct: 315 KRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVCY 374

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER 263
           NVLI   C    + +   L  E+   D   ++ TY+ LI+  C+ G+  +A  + + ME+
Sbjct: 375 NVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEMEK 434

Query: 264 EGISPDIVTYNSLIHGFCREGRMREARRLFRDIK-----------GATPNHV----TYTT 308
            G  P  VT+NSLI G C+ G++ +A  LF  ++              P+HV    +   
Sbjct: 435 LGCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKMEIGRNPSLFLRLSQGPSHVLDSASLQK 494

Query: 309 LIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKK 368
           +++  C +  + +A R+   +A  G  PG+ TYN ++   CK G    A +L  EM  K 
Sbjct: 495 MVEQLCDSGLIHKAYRILMQLADSGDAPGIYTYNILVNGFCKLGNFNGAYKLFREMQFKG 554

Query: 369 IAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAK 428
           ++PD VT  TLIN   +      A KV ++M + G   D   Y+ ++   C+  E+  A 
Sbjct: 555 LSPDTVTYGTLINGLLRFQREEDAYKVFDQMEKNGCTPDAAVYRTMMTWMCRRMELPRAF 614

Query: 429 ELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRF 488
            L    L    S    +    ++GY  K   E  ++ L E   +    D+  Y   +   
Sbjct: 615 SLWLKYLRNIRSQEDEAIK-AIEGYFEKQEVEKAVRGLLEMDFKLNDFDLGPYAIWLIGL 673

Query: 489 CKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDIL 536
           C+  +V  A ++F +++   ++        L Y   + G+     D+ 
Sbjct: 674 CQTRRVGEALKIFLILEEYKVVITPPCCVKLIYFLLKEGDLDRAIDVF 721


>gi|359483659|ref|XP_002274224.2| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
           mitochondrial-like [Vitis vinifera]
          Length = 686

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 145/587 (24%), Positives = 239/587 (40%), Gaps = 122/587 (20%)

Query: 37  SLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKS 96
           S T    H+ + +L       S +   F+WA S +PN+ H+  ++  +IH L   + F++
Sbjct: 87  STTPVPTHQHIAHLILEQKSASQALQTFRWA-SNLPNFIHNQSTYRALIHKLCSFRRFET 145

Query: 97  AQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQM 156
            + +L+++        PS       I   PD    +   +V      +M +  ++V D +
Sbjct: 146 VKEVLDEM--------PS------SIGSPPD--ESIFVTIVRGLGRARMVRQMIKVLDLI 189

Query: 157 RVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKK-------------------------- 190
                 P L     +L+ L K+ + D+  + Y+K                          
Sbjct: 190 TKFGENPSLKIFNSILDVLVKEDI-DLAREFYRKKMMMNGVSGDDYTFGILMKGLCLTNR 248

Query: 191 ----------MVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEM-EFKDVR------- 232
                     M   G   N  +YN +IHA CK+  V +   L+ EM E  DV        
Sbjct: 249 IGDAFKLLQVMKSRGKTPNTVIYNTMIHALCKNGKVGRARSLMNEMVEPSDVTFNVLISA 308

Query: 233 -----------------------ADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
                                   D+ T   ++ + CK G   E + V +R+E  G   D
Sbjct: 309 YCQEENLVQALVLLEKSFSMGFVPDVVTATKVVGILCKAGRVTEGVEVLERVESMGGVVD 368

Query: 270 IVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEALRLRE 327
           +V YN+LI GFC  G+ +   R+ +D  IKG  PN  TY  L  GYC +  L+ A+ L  
Sbjct: 369 VVAYNTLIKGFCMLGKAKVGHRVLKDMEIKGCLPNVDTYNILASGYCDSGMLDSAIDLFN 428

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE--------------------- 366
            M   G+    +TY++++R LC  GR+ D  ++L  M E                     
Sbjct: 429 DMKTDGINWNFMTYDTLIRGLCSGGRMEDGFKILELMEESRGGAGGRISPYNSIIYGLYK 488

Query: 367 --------------KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYK 412
                         +K+ P  V  +  I  +C  G    A +V ++M++ G +     Y 
Sbjct: 489 KNQFEEALEFLTKMEKLFPRAVDRSLRILGFCNEGSIGDAKRVYDQMIKEGGVPSVLVYV 548

Query: 413 ALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSR 472
            LIHGFC+   +  A EL+  M+D G+ P+  +++ L+  +C +    + LKL+++ V R
Sbjct: 549 CLIHGFCQDGNVREAFELINEMVDHGYFPTAPTFNALISAFCGQGKVGSALKLMEDMVGR 608

Query: 473 GLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
           G   D+  Y  ++   C K     A RLF  M    IL D   + S+
Sbjct: 609 GCLPDMGSYSPMVDALCNKGDFQKAVRLFLQMVEKDILPDYSTWNSM 655



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 113/436 (25%), Positives = 205/436 (47%), Gaps = 33/436 (7%)

Query: 83  TMIHILTKNKHFKSAQNMLEKIALRDFLSTPS--VLNALVKIHDDPDGNSHVLSWLVIFY 140
           TMIH L KN     A++++ ++        PS    N L+  +   +   +++  LV+  
Sbjct: 273 TMIHALCKNGKVGRARSLMNEMV------EPSDVTFNVLISAYCQEE---NLVQALVLLE 323

Query: 141 ANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAK-DRLTDMVWKVYKKMVQLGVVAN 199
            +  M                +P +   T ++  L K  R+T+ V +V +++  +G V +
Sbjct: 324 KSFSM--------------GFVPDVVTATKVVGILCKAGRVTEGV-EVLERVESMGGVVD 368

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
           +  YN LI   C         ++L +ME K    ++ TYN L + YC  GM   A+ + +
Sbjct: 369 VVAYNTLIKGFCMLGKAKVGHRVLKDMEIKGCLPNVDTYNILASGYCDSGMLDSAIDLFN 428

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARR---LFRDIKGATPNHVT-YTTLIDGYCR 315
            M+ +GI+ + +TY++LI G C  GRM +  +   L  + +G     ++ Y ++I G  +
Sbjct: 429 DMKTDGINWNFMTYDTLIRGLCSGGRMEDGFKILELMEESRGGAGGRISPYNSIIYGLYK 488

Query: 316 ANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVT 375
            N  EEAL     M    ++P  V  +  +   C EG I DA R+ ++M ++   P  + 
Sbjct: 489 KNQFEEALEFLTKMEK--LFPRAVDRSLRILGFCNEGSIGDAKRVYDQMIKEGGVPSVLV 546

Query: 376 CNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGML 435
              LI+ +C+ G+   A ++ N M++ G      T+ ALI  FC   ++  A +L+  M+
Sbjct: 547 YVCLIHGFCQDGNVREAFELINEMVDHGYFPTAPTFNALISAFCGQGKVGSALKLMEDMV 606

Query: 436 DAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVD 495
             G  P   SYS +VD  CNK + +  ++L  + V + +  D S + +++    ++    
Sbjct: 607 GRGCLPDMGSYSPMVDALCNKGDFQKAVRLFLQMVEKDILPDYSTWNSMLLCLTQETVWL 666

Query: 496 YAQRLFNLMQGNGILG 511
               LF+L   +G  G
Sbjct: 667 EGDNLFHLQLQDGKYG 682


>gi|449500717|ref|XP_004161177.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g02060, chloroplastic-like [Cucumis sativus]
          Length = 720

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 133/518 (25%), Positives = 234/518 (45%), Gaps = 65/518 (12%)

Query: 58  SLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLN 117
           S +  FF WA+     Y H+ QS+++M+ IL +N+H  +A+N L  I  R          
Sbjct: 93  SKALQFFNWAQEM--GYTHTEQSYFSMLEILGRNRHLNTARNFLFSIEKRS--------R 142

Query: 118 ALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAK 177
            +VK+       +   + L+  +    + Q+ ++VF  M+ H + P +     LL  L K
Sbjct: 143 GIVKLE------ARFFNSLMRNFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLK 196

Query: 178 DRLTDMVWKVYKKMVQL-GVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLF 236
              T+M  KVY +M+   GV  +   +N+LI   C +  VD   ++  ++       D+ 
Sbjct: 197 RGRTNMAKKVYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVV 256

Query: 237 TYNTLIALYCKKGMHYEALAVQDRMEREGI--SPDIVTYNSLIHGFCREGRMREARRLFR 294
           TYNTL+   C+ G    A  V   M ++ +  +P++VTY +LI G+C +  + +A  +F 
Sbjct: 257 TYNTLVDGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFE 316

Query: 295 DI--KGATPNHVTYTTLIDG------------------------------------YCRA 316
           ++  +G   N++TY TLI G                                    +C A
Sbjct: 317 EMVNQGLKANNITYNTLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHA 376

Query: 317 NDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTC 376
            +L++AL++ E M+   + P   TY++++R LC+ G    A  LL+++ E+KI      C
Sbjct: 377 GNLDDALKVFERMSELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGC 436

Query: 377 NTLINAY-------CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKE 429
             L+ AY       C+ G T  A K   +++  G   D  +YK LI G CK    +   E
Sbjct: 437 KPLVAAYNPIFKYLCETGKTKKAEKAFRQLMRRGTQ-DPPSYKTLIMGHCKEGTFESGYE 495

Query: 430 LLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFC 489
           LL  ML   F P + +Y  L++G  + +     L+ L++ +      + S + +++ +  
Sbjct: 496 LLVLMLRKDFXPDFETYESLINGLLHMDKPLLALQSLEKMLRSSHRPNSSTFHSILAKLL 555

Query: 490 KKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
           ++ +   +  L  LM    I  +    T      + AG
Sbjct: 556 EQGRASESASLIQLMLDKNIRQNLSFSTGCVRLLFGAG 593



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 98/390 (25%), Positives = 185/390 (47%), Gaps = 16/390 (4%)

Query: 169 TVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEF 228
           T +L +L   R T    + +    ++G       Y  ++    ++  ++     L  +E 
Sbjct: 80  TTVLQTLGFLRDTSKALQFFNWAQEMGYTHTEQSYFSMLEILGRNRHLNTARNFLFSIEK 139

Query: 229 KD---VRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGR 285
           +    V+ +   +N+L+  + + G+  E++ V   M+  G+SP +VT+NSL+    + GR
Sbjct: 140 RSRGIVKLEARFFNSLMRNFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGR 199

Query: 286 MREARRLFRDI---KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYN 342
              A++++ ++    G TP+  T+  LI G+C    +++  R+   ++  G  P VVTYN
Sbjct: 200 TNMAKKVYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYN 259

Query: 343 SILRKLCKEGRIRDANRLLNEMNEKKI--APDNVTCNTLINAYCKIGDTASAMKVKNRML 400
           +++  LC+ G++  A  ++  M +K +   P+ VT  TLI  YC   +   A+ V   M+
Sbjct: 260 TLVDGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMV 319

Query: 401 EAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGML-DAGFSPSYCSYSWLVDGYCNKNNE 459
             GL  +  TY  LI G C+A++ +  K++L G   D  FSP  C+++ L+  +C+  N 
Sbjct: 320 NQGLKANNITYNTLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNL 379

Query: 460 EALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFN-------LMQGNGILGD 512
           +  LK+ +      +  D + Y AL+R  C+    + A+ L +       L+ G+G    
Sbjct: 380 DDALKVFERMSELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPL 439

Query: 513 SVIYTSLAYAYWRAGEPKACSDILDDMYRR 542
              Y  +       G+ K        + RR
Sbjct: 440 VAAYNPIFKYLCETGKTKKAEKAFRQLMRR 469



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 91/435 (20%), Positives = 169/435 (38%), Gaps = 75/435 (17%)

Query: 16  TISAIMLKGHWAKL--LNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPN 73
           T++  ++KG   K   LNPN+ +  T       L+  Y  C    +  A   + E     
Sbjct: 272 TVAYNVVKGMGKKSVDLNPNVVTYTT-------LIRGY--CAKREIEKALAVFEEMVNQG 322

Query: 74  YKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS-VLNALVKIHDDPDGNSHV 132
            K +  ++ T+I  L + + F+  +++LE  A     S  +   N L+  H       H 
Sbjct: 323 LKANNITYNTLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCH------CHA 376

Query: 133 LSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAK----DRLTDMVWKVY 188
                    NL    D L+VF++M    + P     + L+ SL +    ++  D++ K+ 
Sbjct: 377 --------GNL---DDALKVFERMSELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLL 425

Query: 189 KKMVQL---GVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
           ++ + L   G    +  YN +    C++    K EK   ++  +  + D  +Y TLI  +
Sbjct: 426 ERKILLSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAFRQLMRRGTQ-DPPSYKTLIMGH 484

Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGR----MREARRLFRDIKGATP 301
           CK+G       +   M R+   PD  TY SLI+G     +    ++   ++ R      P
Sbjct: 485 CKEGTFESGYELLVLMLRKDFXPDFETYESLINGLLHMDKPLLALQSLEKMLRS--SHRP 542

Query: 302 NHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGV----------------------- 338
           N  T+ +++          E+  L ++M  K +   +                       
Sbjct: 543 NSSTFHSILAKLLEQGRASESASLIQLMLDKNIRQNLSFSTGCVRLLFGAGMNDKAFQLV 602

Query: 339 ---------VTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDT 389
                    V    ++R LC   ++   ++LL    E     D   CNT+I   C+I   
Sbjct: 603 HLLYGKGYSVKMEELIRYLCHCRKVIQGSKLLLFSLESHQFVDMDLCNTVIFQLCEINKL 662

Query: 390 ASAMKVKNRMLEAGL 404
           + A  +  +++E G+
Sbjct: 663 SEAFSLYYKLVEMGV 677


>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 113/430 (26%), Positives = 197/430 (45%), Gaps = 3/430 (0%)

Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
           YA L   ++  ++F +M+   L+P++  C   L SL K   +    +++  M   G   +
Sbjct: 345 YATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPD 404

Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
           I  Y  L+H          +  L   M+   + AD   +N LI  Y K+GM  +A+ +  
Sbjct: 405 IVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFT 464

Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRAN 317
            M+++G+SPD+VTY+++I  F R GR+ +A   F  +  +G  PN   Y ++I G+C   
Sbjct: 465 EMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHG 524

Query: 318 DLEEALRLREVMAAKGV-YPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTC 376
            L +A  L   M  KG+  P +V +NS++  LCK+GR+ DA+ + + + +    PD +T 
Sbjct: 525 GLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITF 584

Query: 377 NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD 436
            +LI+ YC +G    A K+ + M   G+  D  TY  L+ G+ K   ++    L   M  
Sbjct: 585 TSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQR 644

Query: 437 AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDY 496
            G  P+  +Y  ++ G        A  K   E +  G  V VS+Y  ++   C+    D 
Sbjct: 645 KGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADE 704

Query: 497 AQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSA 556
           A  LF  +    +     I  ++  A ++    +   ++   +    L+     Y     
Sbjct: 705 AIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMII 764

Query: 557 SYAKDNEILD 566
           +  KD  + D
Sbjct: 765 NLLKDGAVED 774



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 117/409 (28%), Positives = 195/409 (47%), Gaps = 9/409 (2%)

Query: 149 GLQVFDQMRVHNLMPHLHACTVLLNSLA-KDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           GL +F  +    L  H    + LL  L   +R  + V  +  +M +LG V N+  Y++++
Sbjct: 176 GLVLFGCILRTGLKIHQITASTLLKCLCYANRTEEAVNVLLHRMSELGCVPNVFSYSIIL 235

Query: 208 HACCKSSDVDKVEKLLCEM--EFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
              C +S   +   L   M  E      ++  YNT+I  + K+G   +A ++   M R+G
Sbjct: 236 KGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQG 295

Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEAL 323
           + PD+VTYN +I   C+   M +A  + R +   GA P+ VTY  +I GY     L+EA 
Sbjct: 296 VKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAA 355

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
           ++   M ++G+ P +V  NS L  LCK GR ++A  + + M  K   PD V+  TL++ Y
Sbjct: 356 KMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGY 415

Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY 443
              G  A  + + N M   G+  D   +  LIH + K   +D A  +   M   G SP  
Sbjct: 416 ASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDV 475

Query: 444 CSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNL 503
            +YS ++  +         ++  ++ V+RG+  + +VY ++I+ FC    +  A+ L + 
Sbjct: 476 VTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSE 535

Query: 504 MQGNGIL-GDSVIYTSLAYAYWRAGEPKACSDILD---DMYRRRLMITL 548
           M   GI   D V + S+  +  + G      DI D   D+  R  +IT 
Sbjct: 536 MINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITF 584



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 111/443 (25%), Positives = 203/443 (45%), Gaps = 46/443 (10%)

Query: 146 TQDGLQVFDQMRVHNLMPHLHA-CTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYN 204
           +++  ++FD M      P + + CT+L    ++    DM+  ++  M   G+ A+  ++N
Sbjct: 386 SKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIG-LFNSMKSNGIAADCRVFN 444

Query: 205 VLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMERE 264
           +LIHA  K   VD    +  EM+ + V  D+ TY+T+I+ + + G   +A+   ++M   
Sbjct: 445 ILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVAR 504

Query: 265 GISPDIVTYNSLIHGFC------------------------------------REGRMRE 288
           GI P+   Y+S+I GFC                                    ++GR+ +
Sbjct: 505 GIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMD 564

Query: 289 ARRLF---RDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSIL 345
           A  +F    DI G  P+ +T+T+LIDGYC    +++A ++ + M   GV   +VTY+++L
Sbjct: 565 AHDIFDLVTDI-GERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLL 623

Query: 346 RKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLM 405
               K GRI D   L  EM  K + P+ VT   ++    + G T +A K  + M+E+G  
Sbjct: 624 DGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTT 683

Query: 406 LDQFTYKALIHGFCKAKEMDIAKELL--FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALL 463
           +    Y  ++ G C+    D A  L    G ++  FS +    + +++       +E   
Sbjct: 684 VTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITI--LNTMINAMYKVQRKEEAK 741

Query: 464 KLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAY 523
           +L     + GL  + S Y  +I    K   V+ A  +F+ M+ +GI+  S +   +    
Sbjct: 742 ELFATISASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGIVPGSRLLNRIIRML 801

Query: 524 WRAGEPKACSDILDDMYRRRLMI 546
              GE     + L  +  +R+++
Sbjct: 802 LEKGEIAKAGNYLSKVDGKRILL 824



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 102/389 (26%), Positives = 172/389 (44%), Gaps = 7/389 (1%)

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
           V   +H Y++L+  CC++   D    L   +    ++    T +TL+   C      EA+
Sbjct: 153 VPLTVHTYSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITASTLLKCLCYANRTEEAV 212

Query: 256 AVQ-DRMEREGISPDIVTYNSLIHGFCREGRMREARRLF----RDIKGATPNHVTYTTLI 310
            V   RM   G  P++ +Y+ ++ G C     + A  LF    ++    +PN V Y T+I
Sbjct: 213 NVLLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVI 272

Query: 311 DGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIA 370
            G+ +  +  +A  L   M  +GV P VVTYN I+  LCK   +  A  +L +M      
Sbjct: 273 HGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQ 332

Query: 371 PDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL 430
           PD VT N +I+ Y  +G    A K+  +M   GL+ +     + +   CK      A E+
Sbjct: 333 PDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEI 392

Query: 431 LFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCK 490
              M   G  P   SY  L+ GY ++     ++ L +   S G+  D  V+  LI  + K
Sbjct: 393 FDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAK 452

Query: 491 KEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKI 550
           +  VD A  +F  MQ  G+  D V Y+++  A+ R G      +  + M  R +     +
Sbjct: 453 RGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAV 512

Query: 551 YRSFSASYAKDNEILDL--FWSHVVDRGL 577
           Y S    +     ++      S ++++G+
Sbjct: 513 YHSIIQGFCMHGGLVKAKELVSEMINKGI 541



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 89/350 (25%), Positives = 153/350 (43%), Gaps = 40/350 (11%)

Query: 132 VLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAK-DRLTDMVWKVYKK 190
           V + L+  YA   M  D + +F +M+   + P +   + ++++ ++  RLTD + K + +
Sbjct: 442 VFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEK-FNQ 500

Query: 191 MVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDV------------------- 231
           MV  G+  N  +Y+ +I   C    + K ++L+ EM  K +                   
Sbjct: 501 MVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDG 560

Query: 232 -----------------RADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYN 274
                            R D+ T+ +LI  YC  G   +A  + D ME  G+  DIVTY+
Sbjct: 561 RVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYS 620

Query: 275 SLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAK 332
           +L+ G+ + GR+ +   LFR++  KG  PN VTY  ++ G  RA     A +    M   
Sbjct: 621 TLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIES 680

Query: 333 GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
           G    V  Y  IL  LC+     +A  L  ++    +       NT+INA  K+     A
Sbjct: 681 GTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEA 740

Query: 393 MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
            ++   +  +GL+ ++ TY  +I    K   ++ A  +   M  +G  P 
Sbjct: 741 KELFATISASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGIVPG 790



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 97/344 (28%), Positives = 154/344 (44%), Gaps = 22/344 (6%)

Query: 254 ALAVQDRMEREGISPDIV-----TYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTY 306
           ALA+ +R+ RE   P +V     TY+ L+   CR  R      LF  I   G   + +T 
Sbjct: 136 ALALFNRVCREQAGPRVVPLTVHTYSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITA 195

Query: 307 TTLIDGYCRANDLEEALR-LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMN 365
           +TL+   C AN  EEA+  L   M+  G  P V +Y+ IL+ LC     + A  L   M 
Sbjct: 196 STLLKCLCYANRTEEAVNVLLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMA 255

Query: 366 EKKIA--PDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
           ++  A  P+ V  NT+I+ + K G+T  A  + + M   G+  D  TY  +I   CKA+ 
Sbjct: 256 KEGGACSPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARA 315

Query: 424 MDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRA 483
           MD A+ +L  M   G  P   +Y+ ++ GY      +   K+  +  SRGL  ++ +  +
Sbjct: 316 MDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNS 375

Query: 484 LIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRR 543
            +   CK  +   A  +F+ M   G   D V Y +L + Y   G       + + M    
Sbjct: 376 FLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNG 435

Query: 544 LMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKEMQ 587
           +    +++     +YAK           +VD  ++   IF EMQ
Sbjct: 436 IAADCRVFNILIHAYAKRG---------MVDDAML---IFTEMQ 467



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 77/350 (22%), Positives = 141/350 (40%), Gaps = 25/350 (7%)

Query: 67  AESAVPNYK--HSLQSHWTMIHILTKNKHFKSAQNMLEK-IALRDFLSTPSVLNALVK-- 121
           A    PN    HS+   + M   L K K   S   M+ K I   D +   SV+N+L K  
Sbjct: 503 ARGIQPNTAVYHSIIQGFCMHGGLVKAKELVS--EMINKGIPRPDIVFFNSVINSLCKDG 560

Query: 122 --------------IHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHA 167
                         I + PD      + L+  Y  +       ++ D M V  +   +  
Sbjct: 561 RVMDAHDIFDLVTDIGERPD--VITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVT 618

Query: 168 CTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEME 227
            + LL+   K+   +    ++++M + GV  N   Y +++    ++       K   EM 
Sbjct: 619 YSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMI 678

Query: 228 FKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMR 287
                  +  Y  ++   C+     EA+ +  ++    +   I   N++I+   +  R  
Sbjct: 679 ESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKE 738

Query: 288 EARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSIL 345
           EA+ LF  I   G  PN  TY  +I    +   +E+A  +   M   G+ PG    N I+
Sbjct: 739 EAKELFATISASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGIVPGSRLLNRII 798

Query: 346 RKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKV 395
           R L ++G I  A   L++++ K+I  +  T + +++ + + G     MK+
Sbjct: 799 RMLLEKGEIAKAGNYLSKVDGKRILLEASTTSLMLSLFSRKGKYHEDMKL 848


>gi|356499433|ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Glycine max]
          Length = 905

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 123/491 (25%), Positives = 225/491 (45%), Gaps = 21/491 (4%)

Query: 63  FFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKI 122
           +F+W E       HS +++  ++ ++ + ++ +  + +LE++++  F             
Sbjct: 118 YFRWVERKTKQL-HSPEAYNALLMLMARTRNLEYLEQILEEMSMAGF------------- 163

Query: 123 HDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTD 182
              P  N+ +   +V  +   +  ++   V + MR     P   A T L+ +L+     D
Sbjct: 164 --GPSNNTCI--EMVASFVKSRKLREAFGVIETMRKFKFRPAYSAYTTLIGALSAAHEAD 219

Query: 183 MVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLI 242
            +  + ++M ++G    +HL+  LI    +   VD    LL EM+     ADL  YN  I
Sbjct: 220 PMLTLLRQMQEIGYEVTVHLFTTLICVFAREGRVDAALSLLDEMKSNSFNADLVLYNVCI 279

Query: 243 ALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKG--AT 300
             + K G    A      ++ +G+ PD VT+ S+I   C+  R+ EA  LF ++    + 
Sbjct: 280 DCFGKVGKVDMAWKFFHELKSQGLVPDDVTFTSMIGVLCKAERVDEAVELFEELDSNKSV 339

Query: 301 PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRL 360
           P    Y T+I GY       EA  L E    KG  P V+ YN IL  L ++G++ +A R+
Sbjct: 340 PCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRI 399

Query: 361 LNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCK 420
           L  M +   AP+  + N LI+  CK G+  +A+KV++ M EAGL  +  T   +I   CK
Sbjct: 400 LEAM-KMDAAPNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCK 458

Query: 421 AKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSV 480
           A+ +D A  +  G+     +P   ++  L+DG            L ++ +  G   +  V
Sbjct: 459 AQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVV 518

Query: 481 YRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMY 540
           Y +LIR F K  + +   +++  M   G   D ++  +     ++AGE +    + +++ 
Sbjct: 519 YTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIK 578

Query: 541 RRRLMITLKIY 551
            + L   ++ Y
Sbjct: 579 AQGLTPDVRSY 589



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 127/514 (24%), Positives = 235/514 (45%), Gaps = 23/514 (4%)

Query: 68  ESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTP------SVLNALVK 121
           E ++  +  S  +   M+    K++  + A  ++E   +R F   P      +++ AL  
Sbjct: 157 EMSMAGFGPSNNTCIEMVASFVKSRKLREAFGVIE--TMRKFKFRPAYSAYTTLIGALSA 214

Query: 122 IHD-DP-------------DGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHA 167
            H+ DP             +   H+ + L+  +A        L + D+M+ ++    L  
Sbjct: 215 AHEADPMLTLLRQMQEIGYEVTVHLFTTLICVFAREGRVDAALSLLDEMKSNSFNADLVL 274

Query: 168 CTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEME 227
             V ++   K    DM WK + ++   G+V +   +  +I   CK+  VD+  +L  E++
Sbjct: 275 YNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFTSMIGVLCKAERVDEAVELFEELD 334

Query: 228 FKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMR 287
                  ++ YNT+I  Y   G   EA ++ +R +R+G  P ++ YN ++    R+G++ 
Sbjct: 335 SNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVE 394

Query: 288 EARRLFRDIK-GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILR 346
           EA R+   +K  A PN  +Y  LID  C+A +LE AL++++ M   G++P ++T N ++ 
Sbjct: 395 EALRILEAMKMDAAPNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMID 454

Query: 347 KLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLML 406
           +LCK  R+ +A  +   ++ K   PD+VT  +LI+   + G    A  +  +ML++G   
Sbjct: 455 RLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTP 514

Query: 407 DQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLL 466
           +   Y +LI  F K    +   ++   M+  G SP     +  +D        E    L 
Sbjct: 515 NAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALF 574

Query: 467 DEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRA 526
           +E  ++GL  DV  Y  LI    K        +LF  M+  G+  D+  Y  +   + ++
Sbjct: 575 EEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKS 634

Query: 527 GEPKACSDILDDMYRRRLMITLKIYRSFSASYAK 560
           G+      +L++M  + L  T+  Y S     AK
Sbjct: 635 GKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAK 668



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 104/399 (26%), Positives = 193/399 (48%), Gaps = 3/399 (0%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           + +++F+++  +  +P ++A   ++         +  + + ++  + G + ++  YN ++
Sbjct: 325 EAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCIL 384

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
               +   V++  ++L  M+  D   +L +YN LI + CK G    AL VQD M+  G+ 
Sbjct: 385 TCLGRKGKVEEALRILEAMKM-DAAPNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLF 443

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFR--DIKGATPNHVTYTTLIDGYCRANDLEEALRL 325
           P+I+T N +I   C+  R+ EA  +F   D K  TP+ VT+ +LIDG  R   + +A  L
Sbjct: 444 PNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYML 503

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
            E M   G  P  V Y S++R   K GR  D +++  EM  +  +PD +  N  ++   K
Sbjct: 504 YEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFK 563

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
            G+      +   +   GL  D  +Y  LIHG  K        +L + M + G      +
Sbjct: 564 AGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRA 623

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
           Y+ ++DG+C         +LL+E  ++GL   V  Y ++I    K +++D A  LF   +
Sbjct: 624 YNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK 683

Query: 506 GNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL 544
              +  + V+Y+SL   + + G       IL+++ ++ L
Sbjct: 684 SKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGL 722



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 92/351 (26%), Positives = 167/351 (47%), Gaps = 2/351 (0%)

Query: 171 LLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKD 230
           L++ L +    +  + +Y+KM+  G   N  +Y  LI    K    +   K+  EM  + 
Sbjct: 487 LIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRG 546

Query: 231 VRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREAR 290
              DL   N  +    K G   +  A+ + ++ +G++PD+ +Y+ LIHG  + G  ++  
Sbjct: 547 CSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTY 606

Query: 291 RLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
           +LF ++K  G   +   Y  +IDG+C++  + +A +L E M  KG+ P VVTY S++  L
Sbjct: 607 KLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGL 666

Query: 349 CKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ 408
            K  R+ +A  L  E   K +  + V  ++LI+ + K+G    A  +   +++ GL  + 
Sbjct: 667 AKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNT 726

Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
           +T+  L+    KA+E+D A      M +    P+  +YS +V+G C             E
Sbjct: 727 YTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQE 786

Query: 469 FVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
              +GL  +   Y  +I    +   V  A+ LF   + +G + DS  Y ++
Sbjct: 787 MQKQGLKPNTITYTTMISGLARVGNVLEAKDLFERFKSSGGIPDSACYNAM 837



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 95/356 (26%), Positives = 168/356 (47%), Gaps = 2/356 (0%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           D   ++++M      P+    T L+ +  K    +   K+YK+M+  G   ++ L N  +
Sbjct: 499 DAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYM 558

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
               K+ +++K   L  E++ + +  D+ +Y+ LI    K G   +   +   M+ +G+ 
Sbjct: 559 DCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLH 618

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRL 325
            D   YN +I GFC+ G++ +A +L  ++K  G  P  VTY ++IDG  + + L+EA  L
Sbjct: 619 LDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYML 678

Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
            E   +K V   VV Y+S++    K GRI +A  +L E+ +K + P+  T N L++A  K
Sbjct: 679 FEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVK 738

Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
             +   A+     M       ++ TY  +++G CK ++ + A      M   G  P+  +
Sbjct: 739 AEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTIT 798

Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
           Y+ ++ G     N      L + F S G   D + Y A+I       K   A  LF
Sbjct: 799 YTTMISGLARVGNVLEAKDLFERFKSSGGIPDSACYNAMIEGLSNANKAMDAYILF 854



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 90/347 (25%), Positives = 159/347 (45%), Gaps = 2/347 (0%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N+ V + L+  +      +DG +++ +M      P L      ++ + K    +    ++
Sbjct: 515 NAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALF 574

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
           +++   G+  ++  Y++LIH   K        KL  EM+ + +  D   YN +I  +CK 
Sbjct: 575 EEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKS 634

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGATP--NHVTY 306
           G   +A  + + M+ +G+ P +VTY S+I G  +  R+ EA  LF + K      N V Y
Sbjct: 635 GKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVY 694

Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
           ++LIDG+ +   ++EA  + E +  KG+ P   T+N +L  L K   I +A      M  
Sbjct: 695 SSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKN 754

Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
            K  P+ VT + ++N  CK+     A      M + GL  +  TY  +I G  +   +  
Sbjct: 755 LKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMISGLARVGNVLE 814

Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
           AK+L      +G  P    Y+ +++G  N N       L +E   +G
Sbjct: 815 AKDLFERFKSSGGIPDSACYNAMIEGLSNANKAMDAYILFEETRLKG 861



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/429 (23%), Positives = 190/429 (44%), Gaps = 38/429 (8%)

Query: 146 TQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNV 205
            ++ L++ + M++ +  P+L +  +L++ L K    +   KV   M + G+  NI   N+
Sbjct: 393 VEEALRILEAMKM-DAAPNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNI 451

Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
           +I   CK+  +D+   +   ++ K    D  T+ +LI    + G   +A  + ++M   G
Sbjct: 452 MIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSG 511

Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEAL 323
            +P+ V Y SLI  F + GR  +  ++++++  +G +P+ +     +D   +A ++E+  
Sbjct: 512 QTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGR 571

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
            L E + A+G+ P V +Y+ ++  L K G  +D  +L  EM E+ +  D    N +I+ +
Sbjct: 572 ALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGF 631

Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY 443
           CK G    A ++   M   GL     TY ++I G  K   +D A  L           + 
Sbjct: 632 CKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNV 691

Query: 444 CSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYA----QR 499
             YS L+DG+      +    +L+E + +GL  +   +  L+    K E++D A    Q 
Sbjct: 692 VVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQN 751

Query: 500 LFNL-------------------------------MQGNGILGDSVIYTSLAYAYWRAGE 528
           + NL                               MQ  G+  +++ YT++     R G 
Sbjct: 752 MKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMISGLARVGN 811

Query: 529 PKACSDILD 537
                D+ +
Sbjct: 812 VLEAKDLFE 820



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 64/235 (27%), Positives = 115/235 (48%), Gaps = 4/235 (1%)

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAK-DRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
           Q+ ++M+   L P +     +++ LAK DRL D  + ++++     V  N+ +Y+ LI  
Sbjct: 642 QLLEEMKTKGLQPTVVTYGSVIDGLAKIDRL-DEAYMLFEEAKSKAVDLNVVVYSSLIDG 700

Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
             K   +D+   +L E+  K +  + +T+N L+    K     EAL     M+     P+
Sbjct: 701 FGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPN 760

Query: 270 IVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLRE 327
            VTY+ +++G C+  +  +A   +++++  G  PN +TYTT+I G  R  ++ EA  L E
Sbjct: 761 EVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMISGLARVGNVLEAKDLFE 820

Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 382
              + G  P    YN+++  L    +  DA  L  E   K     + TC  L++A
Sbjct: 821 RFKSSGGIPDSACYNAMIEGLSNANKAMDAYILFEETRLKGCRIYSKTCVVLLDA 875



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/248 (23%), Positives = 107/248 (43%), Gaps = 16/248 (6%)

Query: 91  NKHFKSAQNMLEKIALRDFLSTPSVLNALVKIH--DDP------------DGNSHVLSWL 136
           NK ++  + M  K      ++  SV++ L KI   D+             D N  V S L
Sbjct: 638 NKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSL 697

Query: 137 VIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGV 196
           +  +  +    +   + +++    L P+ +    LL++L K    D     ++ M  L  
Sbjct: 698 IDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKC 757

Query: 197 VANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALA 256
             N   Y+++++  CK    +K      EM+ + ++ +  TY T+I+   + G   EA  
Sbjct: 758 PPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMISGLARVGNVLEAKD 817

Query: 257 VQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYC 314
           + +R +  G  PD   YN++I G     +  +A  LF +  +KG      T   L+D   
Sbjct: 818 LFERFKSSGGIPDSACYNAMIEGLSNANKAMDAYILFEETRLKGCRIYSKTCVVLLDALH 877

Query: 315 RANDLEEA 322
           +A+ LE+A
Sbjct: 878 KADCLEQA 885



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 50/220 (22%), Positives = 92/220 (41%)

Query: 340 TYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRM 399
            YN++L  + +   +    ++L EM+     P N TC  ++ ++ K      A  V   M
Sbjct: 134 AYNALLMLMARTRNLEYLEQILEEMSMAGFGPSNNTCIEMVASFVKSRKLREAFGVIETM 193

Query: 400 LEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNE 459
            +         Y  LI     A E D    LL  M + G+  +   ++ L+  +  +   
Sbjct: 194 RKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLICVFAREGRV 253

Query: 460 EALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
           +A L LLDE  S     D+ +Y   I  F K  KVD A + F+ ++  G++ D V +TS+
Sbjct: 254 DAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFTSM 313

Query: 520 AYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYA 559
                +A       ++ +++   + +  +  Y +    Y 
Sbjct: 314 IGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYG 353


>gi|297743431|emb|CBI36298.3| unnamed protein product [Vitis vinifera]
          Length = 641

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 139/545 (25%), Positives = 245/545 (44%), Gaps = 41/545 (7%)

Query: 25  HWAKLLNPNIASS--LTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHW 82
            W + L    + S  L S   H VL  + +      L   FF W      +   +  ++ 
Sbjct: 43  QWEENLQTRFSESEVLASDVAHLVLDRIRDV----ELGLKFFDWVSRGQYSGPINGFAYS 98

Query: 83  TMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYAN 142
           +++ +L +++ F   + +LE + + +   T   ++ +++ + D   +  V   L ++Y  
Sbjct: 99  SLLKLLARSRVFSEMEVVLENMRVEEMSPTREAMSIVIQAYSD---SGLVEKALELYYFV 155

Query: 143 LKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHL 202
           LK              +   P + AC  LLN L                V+LG +     
Sbjct: 156 LK-------------TYTYFPDVIACNSLLNML----------------VKLGRIEIARK 186

Query: 203 YN-VLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRM 261
           +  +++   CK   +++  KL+ +   +    ++  YNTLI  YCKKG    A  +   +
Sbjct: 187 FTCIMVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIEL 246

Query: 262 EREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDL 319
           + +G  P + TY ++I+GFC++G  +   RL  ++  +G T N   Y T+ID   +   +
Sbjct: 247 KLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHI 306

Query: 320 EEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTL 379
            +A+   E M   G  P +VTYN+++   C++G++ +A++LL +   K + P+  +   L
Sbjct: 307 VKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPL 366

Query: 380 INAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGF 439
           I+AYCK G    A      M E G   D  TY AL+HG   A E+D+A  +   ML+ G 
Sbjct: 367 IHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGV 426

Query: 440 SPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQR 499
            P    Y+ L+ G C K    A   LL E + + +  D  VY  L+  F +   +D A++
Sbjct: 427 FPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARK 486

Query: 500 LFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYA 559
           LF L    G+    V Y ++   Y + G  K     ++ M +R L      Y +    Y 
Sbjct: 487 LFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYV 546

Query: 560 KDNEI 564
           K +++
Sbjct: 547 KQHDL 551



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 122/267 (45%), Gaps = 19/267 (7%)

Query: 75  KHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLS 134
           K  + ++ T+I    ++     A  +LE+   +  +        L+  +    G     +
Sbjct: 322 KPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASN 381

Query: 135 WLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQL 194
           WL+      +MT+ G +           P L     L++ L      D+   + +KM++ 
Sbjct: 382 WLI------EMTERGHK-----------PDLVTYGALVHGLVVAGEVDVALTIREKMLER 424

Query: 195 GVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEA 254
           GV  +  +YN+L+   CK   +   + LL EM  + V  D F Y TL+  + + G   EA
Sbjct: 425 GVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEA 484

Query: 255 LAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGA--TPNHVTYTTLIDG 312
             + +    +G++P IV YN++I G+C+ G M++A      +K     P+  TY+T+IDG
Sbjct: 485 RKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDG 544

Query: 313 YCRANDLEEALRLREVMAAKGVYPGVV 339
           Y + +DL+ A ++   M      P V+
Sbjct: 545 YVKQHDLDGAQKMFREMVKMKCKPNVM 571



 Score = 58.5 bits (140), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 56/261 (21%), Positives = 112/261 (42%), Gaps = 30/261 (11%)

Query: 315 RANDLEEALRLREVMAAKGVYPGVV---TYNSILRKLCKEGRIRDANRLLNEMNEKKIAP 371
           R  D+E  L+  +   ++G Y G +    Y+S+L+ L +     +   +L  M  ++++P
Sbjct: 69  RIRDVELGLKFFD-WVSRGQYSGPINGFAYSSLLKLLARSRVFSEMEVVLENMRVEEMSP 127

Query: 372 DNVTCNTLINAYCKIGDTASAMKVKNRMLEA-GLMLDQFTYKALIHGFCKAKEMDIAKEL 430
                + +I AY   G    A+++   +L+      D     +L++   K   ++IA++ 
Sbjct: 128 TREAMSIVIQAYSDSGLVEKALELYYFVLKTYTYFPDVIACNSLLNMLVKLGRIEIARKF 187

Query: 431 LFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCK 490
                             +V G C +   E   KL+++   +G   ++  Y  LI  +CK
Sbjct: 188 T---------------CIMVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCK 232

Query: 491 KEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKI 550
           K  ++ A  LF  ++  G L     Y ++   + + G+ KA   +L +M  R L + +++
Sbjct: 233 KGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQV 292

Query: 551 YRSFSASYAKDNEILDLFWSH 571
           Y          N I+D  + H
Sbjct: 293 Y----------NTIIDARYKH 303


>gi|449475988|ref|XP_004154607.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Cucumis sativus]
          Length = 950

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 128/498 (25%), Positives = 221/498 (44%), Gaps = 56/498 (11%)

Query: 117 NALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLA 176
           N+ +KI      +S   S L+  Y+   M +  ++ F  MR  +  P L A  ++L+ L 
Sbjct: 121 NSAIKI------SSEAFSVLIEAYSEAGMDEKAVESFSLMRDFDCKPDLFAFNLILHFLV 174

Query: 177 KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLF 236
           +     +   VY +M++  +  ++  Y +LIH  CK+        L  EM  + +  +  
Sbjct: 175 RKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQI 234

Query: 237 TYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI 296
            Y+ +++  C+    ++A  +  +M   G + D++TYN L++GFC+ G + +A  L + +
Sbjct: 235 IYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLL 294

Query: 297 K--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRI 354
              G     + Y  LI+G  RA   EEA    + M  + + P V+ Y  ++R L +EGR+
Sbjct: 295 TKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRV 354

Query: 355 RDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKAL 414
            +A  LL EM E+ + PD +  N LI  +C +G    A  ++  + +     +  TY  L
Sbjct: 355 TEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSIL 414

Query: 415 IHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNN-EEALL---------- 463
           I G CK   ++ A+ +   M   G  PS  +++ L++G C  N  EEA L          
Sbjct: 415 ICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRK 474

Query: 464 -------------------------------------KLLDEFVSRGLCVDVSVYRALIR 486
                                                KLL + V  G+  D+  Y  LI 
Sbjct: 475 PSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILIN 534

Query: 487 RFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMI 546
            FCK   ++ A +LF  MQ  G + DSV Y +L    +RAG  +   +I + M ++  + 
Sbjct: 535 GFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVP 594

Query: 547 TLKIYRSFSASYAKDNEI 564
               Y++      ++N I
Sbjct: 595 ESSTYKTIMTWSCRENNI 612



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 113/441 (25%), Positives = 202/441 (45%), Gaps = 56/441 (12%)

Query: 109 FLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKM--TQDGLQVFDQMRVHNLMPHLH 166
           FL   +V N ++K + +PD    V+++ ++ +   K   TQD L +FD+M    ++P+  
Sbjct: 179 FLLALAVYNQMLKCNLNPD----VVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQI 234

Query: 167 ACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLL--- 223
             +++L+ L + +      +++ KM   G   ++  YNVL++  CKS  +D    LL   
Sbjct: 235 IYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLL 294

Query: 224 -------------C-------------------EMEFKDVRADLFTYNTLIALYCKKGMH 251
                        C                   +M  ++++ D+  Y  +I    ++G  
Sbjct: 295 TKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRV 354

Query: 252 YEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTL 309
            EAL +   M   G+ PD + YN+LI GFC  G + EA  L  +I      PN+ TY+ L
Sbjct: 355 TEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSIL 414

Query: 310 IDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI 369
           I G C+   + +A  + + M   G  P VVT+NS++  LCK  R+ +A  L  +M   + 
Sbjct: 415 ICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRK 474

Query: 370 AP-------------DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIH 416
                          D  +   ++   C+ G    A K+  +++++G++ D  TY  LI+
Sbjct: 475 PSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILIN 534

Query: 417 GFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCV 476
           GFCK   ++ A +L   M   G  P   +Y  L+DG       E  L++ ++ V +G   
Sbjct: 535 GFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVP 594

Query: 477 DVSVYRALIRRFCKKEKVDYA 497
           + S Y+ ++   C++  +  A
Sbjct: 595 ESSTYKTIMTWSCRENNISLA 615



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 102/382 (26%), Positives = 168/382 (43%), Gaps = 40/382 (10%)

Query: 164 HLHACTV---LLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVE 220
           HL   TV   ++  L K+   ++ WKV +++    +  +   ++VLI A  ++   +K  
Sbjct: 89  HLRCRTVQDLIIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAV 148

Query: 221 KLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGF 280
           +    M   D + DLF +N ++    +K     ALAV ++M +  ++PD+VTY  LIHG 
Sbjct: 149 ESFSLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGL 208

Query: 281 CREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGV 338
           C+  + ++A  LF ++  +G  PN + Y+ ++ G C+A  + +A RL   M A G    +
Sbjct: 209 CKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDL 268

Query: 339 VTYNSILRKLCKEGRIRDANRLL-----------------------------------NE 363
           +TYN +L   CK G + DA  LL                                    +
Sbjct: 269 ITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQK 328

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
           M  + I PD +    +I    + G    A+ +   M E GL  D   Y ALI GFC    
Sbjct: 329 MLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGY 388

Query: 424 MDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRA 483
           +D A+ L   +      P+  +YS L+ G C          +  E    G    V  + +
Sbjct: 389 LDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNS 448

Query: 484 LIRRFCKKEKVDYAQRLFNLMQ 505
           LI   CK  +++ A+ LF  M+
Sbjct: 449 LINGLCKANRLEEARLLFYQME 470



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 87/338 (25%), Positives = 150/338 (44%), Gaps = 51/338 (15%)

Query: 159 HNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDK 218
           H+  P+ H  ++L+  + K+ L +    ++K+M +LG + ++  +N LI+  CK++ +++
Sbjct: 402 HDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEE 461

Query: 219 VEKLLCEMEF-------------KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
              L  +ME               D   D+ +   ++   C+ GM  +A  +  ++   G
Sbjct: 462 ARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSG 521

Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEAL 323
           + PDI TYN LI+GFC+ G +  A +LF++  +KG  P+ VTY TLIDG  RA   E+AL
Sbjct: 522 VLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDAL 581

Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRI-----------RD---------------- 356
            + E M  KG  P   TY +I+   C+E  I           RD                
Sbjct: 582 EIFEQMVKKGCVPESSTYKTIMTWSCRENNISLALSVWMKYLRDFRGWEDEKVRVVAESF 641

Query: 357 -------ANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQF 409
                  A R L EM+ K    D       +    +      A  + + + +  + +   
Sbjct: 642 DNEELQTAIRRLLEMDIKSKNFDLAPYTIFLIGLVQAKRDCEAFAIFSVLKDFKMNISSA 701

Query: 410 TYKALIHGFCKAKEMDIAKELLFGMLDAGFS--PSYCS 445
           +   LI   C  + +D+A ++    L+ GF   P  C+
Sbjct: 702 SCVMLIGRLCMVENLDMAMDVFLFTLERGFRLMPPICN 739



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 97/414 (23%), Positives = 170/414 (41%), Gaps = 81/414 (19%)

Query: 153 FDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCK 212
           + +M   N+ P +   T+++  L+++        +  +M + G+  +   YN LI   C 
Sbjct: 326 YQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCD 385

Query: 213 SSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVT 272
              +D+ E L  E+   D   +  TY+ LI   CK G+  +A  +   ME+ G  P +VT
Sbjct: 386 MGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVT 445

Query: 273 YNSLIHGFCREGRMREARRLFRDIK----------------------------------- 297
           +NSLI+G C+  R+ EAR LF  ++                                   
Sbjct: 446 FNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESG 505

Query: 298 ---------------GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYN 342
                          G  P+  TY  LI+G+C+  ++  A +L + M  KG  P  VTY 
Sbjct: 506 MILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYG 565

Query: 343 SILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML-- 400
           +++  L + GR  DA  +  +M +K   P++ T  T++   C+  + + A+ V  + L  
Sbjct: 566 TLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLALSVWMKYLRD 625

Query: 401 -------EAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGY 453
                  +  ++ + F  + L     +  EMDI  +      +   +P    Y+  + G 
Sbjct: 626 FRGWEDEKVRVVAESFDNEELQTAIRRLLEMDIKSK------NFDLAP----YTIFLIGL 675

Query: 454 CNKNNE---EALLKLLDEF---VSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
                +    A+  +L +F   +S   CV       LI R C  E +D A  +F
Sbjct: 676 VQAKRDCEAFAIFSVLKDFKMNISSASCV------MLIGRLCMVENLDMAMDVF 723


>gi|108862162|gb|ABA95747.2| Cytochrome P450 family protein [Oryza sativa Japonica Group]
          Length = 1595

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 111/373 (29%), Positives = 178/373 (47%), Gaps = 2/373 (0%)

Query: 149  GLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIH 208
            GL +  +M  +  +P L     L+N L K    + +  ++ +M + G   N+ +YN +I 
Sbjct: 1032 GLLLLGEMETNGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVID 1091

Query: 209  ACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISP 268
            A C      +   +L +M       D+ T+NTLI   C +G   +A        R  ++P
Sbjct: 1092 ALCNCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNP 1151

Query: 269  DIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLR 326
            + ++Y  LIHGFC  G +  A  L  ++  +G TP+ VT+  LI G   A  + EAL +R
Sbjct: 1152 NQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVR 1211

Query: 327  EVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKI 386
            E M  + V+P V  YN ++  LCK+  +  A  +L EM EK + PD     TLI+ + + 
Sbjct: 1212 EKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRS 1271

Query: 387  GDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSY 446
             +   A K+   M   G+  D  +  A+I G+C+   M  A   +  M   G  P   +Y
Sbjct: 1272 ENLGDARKIFEFMEHKGVCPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTY 1331

Query: 447  SWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQG 506
            + ++ GY  + N    L+ L + + R    +V  Y +LI  +CK    D A+ LF  MQ 
Sbjct: 1332 TTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQA 1391

Query: 507  NGILGDSVIYTSL 519
              +  + V YT L
Sbjct: 1392 EALSPNVVTYTIL 1404



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 139/581 (23%), Positives = 252/581 (43%), Gaps = 66/581 (11%)

Query: 26   WAKLLNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQ-----S 80
            WA+ L   + S L+   +   + +L +    P L+ A   W++S  P++  +LQ     +
Sbjct: 821  WARSLAALLPSPLSDAHLAAAVSSLPD----PDLAVALLSWSQS--PDHHVALQDPTPLA 874

Query: 81   HWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFY 140
            H T++ +L +++ F +  + L+ ++L     T + L ALV                   Y
Sbjct: 875  HSTLLRLLARSRRFDAVDDTLQSMSLAGAAPTRACLGALVAA-----------------Y 917

Query: 141  ANLKMTQDGLQVFDQMR-VHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
            A+  M     ++ +++R  +  +P +  C  LL  L + R  D   K+Y +M+     A+
Sbjct: 918  ADAGMLGKATEMCERVREQYGSLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLGKDSGAD 977

Query: 200  IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
             +   VL+   C    V++  KL+           +  YN LI  YC++G     L +  
Sbjct: 978  NYSTCVLVRGLCLERRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLG 1037

Query: 260  RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRAN 317
             ME  G  P +VTY SLI+   ++G + +   LF ++  +G +PN   Y ++ID  C   
Sbjct: 1038 EMETNGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCNCR 1097

Query: 318  DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCN 377
               +A+ + + M A G  P ++T+N+++  LC EG +R A   L E   +++ P+ ++  
Sbjct: 1098 SATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYT 1157

Query: 378  TLINAYCKIGD-----------------------------------TASAMKVKNRMLEA 402
             LI+ +C  G+                                    + A+ V+ +M E 
Sbjct: 1158 PLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTER 1217

Query: 403  GLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEAL 462
             +  D   Y  LI G CK + +  AK +L  ML+    P    Y+ L+DG+    N    
Sbjct: 1218 QVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDA 1277

Query: 463  LKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYA 522
             K+ +    +G+C D+    A+I+ +C+   +  A    + M+  G + D   YT++   
Sbjct: 1278 RKIFEFMEHKGVCPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISG 1337

Query: 523  YWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNE 563
            Y + G        L DM +R+    +  Y S    Y K  +
Sbjct: 1338 YAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGD 1378



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 81/326 (24%), Positives = 136/326 (41%), Gaps = 56/326 (17%)

Query: 148  DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
            + L V ++M    + P ++   VL++ L K R+      + ++M++  V  +  +Y  LI
Sbjct: 1206 EALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLI 1265

Query: 208  HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
                +S ++    K+   ME K V  D+ + N +I  YC+ GM  EA+     M + G  
Sbjct: 1266 DGFIRSENLGDARKIFEFMEHKGVCPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCI 1325

Query: 268  PD-----------------------------------IVTYNSLIHGFCREGRMREARRL 292
            PD                                   +VTY+SLI+G+C+ G    A  L
Sbjct: 1326 PDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGL 1385

Query: 293  FRDIKGA--TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL-- 348
            F +++    +PN VTYT LI    + + +  A    E M      P  VT + ++  L  
Sbjct: 1386 FANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTS 1445

Query: 349  ----------CKEGRIRDANRLLNEMNEKKIA-----PDNVTCNTLINAYCKIGDTASAM 393
                      C    +   + LL     KK+      P N   N +I + C+      A+
Sbjct: 1446 CTPCVINSICCNTSEVHGKDALLVVF--KKLVFDIGDPRNSAYNAIIFSLCRHNMLREAL 1503

Query: 394  KVKNRMLEAGLMLDQFTYKALIHGFC 419
              KNRM + G + +  T+ +L++GFC
Sbjct: 1504 DFKNRMAKKGYVPNPITFLSLLYGFC 1529



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/339 (20%), Positives = 132/339 (38%), Gaps = 70/339 (20%)

Query: 84   MIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANL 143
            +I  L K +   +A+N+LE++  ++                 PD    V + L+  +   
Sbjct: 1229 LISGLCKKRMLPAAKNILEEMLEKNV---------------QPD--EFVYATLIDGFIRS 1271

Query: 144  KMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLY 203
            +   D  ++F+ M    + P + +C  ++    +  +          M ++G + +   Y
Sbjct: 1272 ENLGDARKIFEFMEHKGVCPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTY 1331

Query: 204  NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER 263
              +I    K  +++   + LC+M  +  + ++ TY++LI  YCK G    A  +   M+ 
Sbjct: 1332 TTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQA 1391

Query: 264  EGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGY-------- 313
            E +SP++VTY  LI    ++ ++  A   F    +   +PN VT   L++G         
Sbjct: 1392 EALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVI 1451

Query: 314  ------------------------------------------CRANDLEEALRLREVMAA 331
                                                      CR N L EAL  +  MA 
Sbjct: 1452 NSICCNTSEVHGKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAK 1511

Query: 332  KGVYPGVVTYNSILRKLCKEGRIRDANRLL-NEMNEKKI 369
            KG  P  +T+ S+L   C  G+  +   +L NE  +++ 
Sbjct: 1512 KGYVPNPITFLSLLYGFCSVGKSVNWRTILPNEFQQEEF 1550


>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g12775, mitochondrial-like [Glycine max]
          Length = 750

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 113/377 (29%), Positives = 187/377 (49%), Gaps = 2/377 (0%)

Query: 153 FDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCK 212
           FD+M +    P       +L+SL  ++    V  ++KK    G   ++   N+L++  C 
Sbjct: 51  FDRMLLMRPPPPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCH 110

Query: 213 SSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVT 272
            + +     +L  +  +    +  T NTLI   C +G   +AL   D++  +G   + V+
Sbjct: 111 LTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVS 170

Query: 273 YNSLIHGFCREGRMREARRLFRDIKGAT--PNHVTYTTLIDGYCRANDLEEALRLREVMA 330
           Y +LI+G C+ G  +   RL R ++G +  P+ V Y T+I   C+   L +A  L   M 
Sbjct: 171 YRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMI 230

Query: 331 AKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTA 390
            KG+ P VVTYN+++   C  G +++A  LLNEM  K I PD  T NTLI+A  K G   
Sbjct: 231 VKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMK 290

Query: 391 SAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLV 450
           +A  V   M++A +  D  TY +LI G+    ++  AK + + M  +G +P+  +Y+ ++
Sbjct: 291 AAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMI 350

Query: 451 DGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGIL 510
           DG C +   +  + L +E   + +  D+  Y +LI   CK   ++ A  L   M+  GI 
Sbjct: 351 DGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQ 410

Query: 511 GDSVIYTSLAYAYWRAG 527
            D   YT L  A  + G
Sbjct: 411 PDVYSYTILLDALCKGG 427



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 125/467 (26%), Positives = 221/467 (47%), Gaps = 24/467 (5%)

Query: 46  VLLNLYNCCHIPSLSCAFFKW-AESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKI 104
           +L +L N  H P++   F K+ +  A P+    L +   +++      H   A ++L  I
Sbjct: 69  ILSSLVNNKHYPTVISLFKKFESNGATPD----LCTLNILMNCFCHLTHITFAFSVLANI 124

Query: 105 ALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPH 164
             R +      LN L+K               + F   +K     L   DQ+       +
Sbjct: 125 LKRGYHPNAITLNTLIKG--------------LCFRGEIK---KALYFHDQVVAQGFQLN 167

Query: 165 LHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLC 224
             +   L+N L K   T  V ++ +K+    V  ++ +YN +IH+ CK+  +     L  
Sbjct: 168 QVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYS 227

Query: 225 EMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREG 284
           EM  K +  ++ TYN L+  +C  G   EA ++ + M+ + I+PD+ T+N+LI    +EG
Sbjct: 228 EMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEG 287

Query: 285 RMREARRLFRDIKGA--TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYN 342
           +M+ A+ +   +  A   P+ VTY +LIDGY   N ++ A  +   MA  GV P V TY 
Sbjct: 288 KMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYT 347

Query: 343 SILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEA 402
           +++  LCKE  + +A  L  EM  K + PD VT  +LI+  CK      A+ +  +M E 
Sbjct: 348 TMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQ 407

Query: 403 GLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEAL 462
           G+  D ++Y  L+   CK   ++ AKE    +L  G+  +  +Y+ +++G C  +     
Sbjct: 408 GIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEA 467

Query: 463 LKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGI 509
           + L  +   +G   D   ++ +I    +K++ D A+++   M   G+
Sbjct: 468 MDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGL 514



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 176/365 (48%), Gaps = 2/365 (0%)

Query: 188 YKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCK 247
           + ++V  G   N   Y  LI+  CK+ +   V +LL ++E   V+ D+  YNT+I   CK
Sbjct: 156 HDQVVAQGFQLNQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCK 215

Query: 248 KGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVT 305
             +  +A  +   M  +GISP++VTYN+L++GFC  G ++EA  L  +  +K   P+  T
Sbjct: 216 NKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCT 275

Query: 306 YTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMN 365
           + TLID   +   ++ A  +  VM    + P VVTYNS++       ++++A  +   M 
Sbjct: 276 FNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMA 335

Query: 366 EKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMD 425
           +  + P+  T  T+I+  CK      AM +   M    ++ D  TY +LI G CK   ++
Sbjct: 336 QSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLE 395

Query: 426 IAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
            A  L   M + G  P   SY+ L+D  C     E   +     + +G  ++V  Y  +I
Sbjct: 396 RAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMI 455

Query: 486 RRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
              CK +    A  L + M+G G + D++ + ++  A +   E      IL +M  R L 
Sbjct: 456 NGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQ 515

Query: 546 ITLKI 550
              K+
Sbjct: 516 EARKV 520



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 155/633 (24%), Positives = 263/633 (41%), Gaps = 125/633 (19%)

Query: 50  LYNC-CHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRD 108
           L NC CH+  ++ AF   A      Y  +  +  T+I  L      K A    +++  + 
Sbjct: 104 LMNCFCHLTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQG 163

Query: 109 F----LSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPH 164
           F    +S  +++N L K  +                     T+   ++  ++  H++ P 
Sbjct: 164 FQLNQVSYRTLINGLCKTGE---------------------TKAVARLLRKLEGHSVKPD 202

Query: 165 LHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLC 224
           +     +++SL K++L      +Y +M+  G+  N+  YN L++  C    + +   LL 
Sbjct: 203 VVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLN 262

Query: 225 EMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGF---- 280
           EM+ K++  D+ T+NTLI    K+G    A  V   M +  I PD+VTYNSLI G+    
Sbjct: 263 EMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLN 322

Query: 281 -------------------------------CREGRMREARRLFRDIK--GATPNHVTYT 307
                                          C+E  + EA  LF ++K     P+ VTYT
Sbjct: 323 KVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYT 382

Query: 308 TLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDA----NRLL-- 361
           +LIDG C+ + LE A+ L + M  +G+ P V +Y  +L  LCK GR+ +A     RLL  
Sbjct: 383 SLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVK 442

Query: 362 -----------------------------NEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
                                        ++M  K   PD +T  T+I A  +  +   A
Sbjct: 443 GYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKA 502

Query: 393 MKV-------------KNRMLEAGLML----------DQFTYKALIHGFCKAKEMDIAKE 429
            K+             K R+ EA ++L          D  TY  L+ G+    E+  AK 
Sbjct: 503 EKILREMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKY 562

Query: 430 LLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFC 489
           + + M   G +P+   Y+ ++DG C K   +  + L +E   + +  ++  Y +LI   C
Sbjct: 563 VFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALC 622

Query: 490 KKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLK 549
           K   ++ A  L   M+ +GI  D   YT L     ++G  +   +I   +  +   + ++
Sbjct: 623 KNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQ 682

Query: 550 IYRSFSASYAKD---NEILDLFWSHVVDRGLMS 579
           +Y +      K    +E LDL    + D+G M 
Sbjct: 683 VYTAMINELCKAGLFDEALDL-QXKMEDKGCMP 714



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 123/442 (27%), Positives = 210/442 (47%), Gaps = 55/442 (12%)

Query: 63  FFKWAESAV-PNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALR----DFLSTPSVLN 117
           F+  A+S V PN    ++++ TMI  L K K    A ++ E++  +    D ++  S+++
Sbjct: 331 FYSMAQSGVTPN----VRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLID 386

Query: 118 ALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAK 177
            L K       N H+              +  + +  +M+   + P +++ T+LL++L K
Sbjct: 387 GLCK-------NHHL--------------ERAIALCKKMKEQGIQPDVYSYTILLDALCK 425

Query: 178 DRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFT 237
               +   + +++++  G   N+  YNV+I+  CK+    +   L  +ME K    D  T
Sbjct: 426 GGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAIT 485

Query: 238 YNTLI-ALYCK---------------KGMHY-------EALAVQDRMEREGISPDIVTYN 274
           + T+I AL+ K               +G+         EA  V   M +  I PD+VTY 
Sbjct: 486 FKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYG 545

Query: 275 SLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAK 332
           +L+ G+     ++ A+ +F  +   G TPN   YT +IDG C+   ++EA+ L E M  K
Sbjct: 546 TLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHK 605

Query: 333 GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
            ++P +VTY S++  LCK   +  A  LL EM E  I PD  +   L++  CK G    A
Sbjct: 606 NMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGA 665

Query: 393 MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
            ++  R+L  G  L+   Y A+I+  CKA   D A +L   M D G  P   ++  ++  
Sbjct: 666 KEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQXKMEDKGCMPDAVTFDIIIWA 725

Query: 453 YCNKNNEEALLKLLDEFVSRGL 474
              K+  +   K+L E ++RGL
Sbjct: 726 LFEKDENDKAEKILXEMIARGL 747



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 112/427 (26%), Positives = 194/427 (45%), Gaps = 60/427 (14%)

Query: 144 KMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLY 203
           KM  + + +F++M+  N++P +   T L++ L K+   +    + KKM + G+  +++ Y
Sbjct: 357 KMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSY 416

Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER 263
            +L+ A CK   ++  ++    +  K    ++ TYN +I   CK  +  EA+ ++ +ME 
Sbjct: 417 TILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEG 476

Query: 264 EGISPDIVTYNSLIHGF-----------------------CREGRMREARRLFRDIKGA- 299
           +G  PD +T+ ++I                           R+ R++EA+ +   +  A 
Sbjct: 477 KGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKAC 536

Query: 300 -TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDAN 358
             P+ VTY TL+DGY   N+L+ A  +   MA  GV P V  Y  ++  LCK+  + +A 
Sbjct: 537 IKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAM 596

Query: 359 RLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGF 418
            L  EM  K + P+ VT  +LI+A CK      A+ +   M E G+  D ++Y  L+ G 
Sbjct: 597 SLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGL 656

Query: 419 CKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDV 478
           CK+  ++ AKE+   +L  G+                                    ++V
Sbjct: 657 CKSGRLEGAKEIFQRLLVKGYH-----------------------------------LNV 681

Query: 479 SVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDD 538
            VY A+I   CK    D A  L   M+  G + D+V +  + +A +   E      IL +
Sbjct: 682 QVYTAMINELCKAGLFDEALDLQXKMEDKGCMPDAVTFDIIIWALFEKDENDKAEKILXE 741

Query: 539 MYRRRLM 545
           M  R LM
Sbjct: 742 MIARGLM 748



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 81/339 (23%), Positives = 149/339 (43%), Gaps = 14/339 (4%)

Query: 254 ALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLID 311
           A+A  DRM      P    +N ++              LF+  +  GATP+  T   L++
Sbjct: 47  AVASFDRMLLMRPPPPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMN 106

Query: 312 GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAP 371
            +C    +  A  +   +  +G +P  +T N++++ LC  G I+ A    +++  +    
Sbjct: 107 CFCHLTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQL 166

Query: 372 DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
           + V+  TLIN  CK G+T +  ++  ++    +  D   Y  +IH  CK K +  A +L 
Sbjct: 167 NQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLY 226

Query: 432 FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
             M+  G SP+  +Y+ LV G+C   + +    LL+E   + +  DV  +  LI    K+
Sbjct: 227 SEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKE 286

Query: 492 EKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIY 551
            K+  A+ +  +M    I  D V Y SL   Y+   + K    +   M +  +   ++ Y
Sbjct: 287 GKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTY 346

Query: 552 RSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKEMQLRN 590
            +      K+          +VD  +    +F+EM+ +N
Sbjct: 347 TTMIDGLCKEK---------MVDEAM---SLFEEMKYKN 373


>gi|297823811|ref|XP_002879788.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297325627|gb|EFH56047.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 867

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 125/483 (25%), Positives = 219/483 (45%), Gaps = 41/483 (8%)

Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
           L+  + N       L  F++M    L P     +V++    K+   +   ++YK+M  +G
Sbjct: 351 LITGFCNGNELGKALDFFNRMEEEGLAPDKVMFSVMIEWFCKNMEMEKAVEIYKRMKSVG 410

Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
           +  +  L + +I  C K+   +   ++  +  F+   A  F  N +  L CK+G    A 
Sbjct: 411 IAPSSVLVHKMIQGCLKAESPEAALEIFND-SFETWIAHGFMCNKIFLLLCKQGKVDAAT 469

Query: 256 AVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGY 313
           +    ME +GI P++V YN+++   CR   M  AR +F ++  KG  PN+ TY+ LIDG+
Sbjct: 470 SFLRMMENKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLQPNNFTYSILIDGF 529

Query: 314 CRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLN----------- 362
            +  D + A  +   M A       V YN+I+  LCK G+   A  +L            
Sbjct: 530 FKNQDEQNAWEVINQMIASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMG 589

Query: 363 -------------------------EMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKN 397
                                    EM+E  I+P+ VT  +LIN +CK      A+++ +
Sbjct: 590 CTSYNSIIDGFFKEGDTDSAVEAYREMSENGISPNVVTFTSLINGFCKSNRMDLALEMIH 649

Query: 398 RMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKN 457
            M    L LD   Y ALI GFCK  +M  A  L   +L+ G  P+   Y+ L+ G+ N  
Sbjct: 650 EMKSKDLKLDVPAYGALIDGFCKKNDMKTAYTLFSELLELGLMPNVSVYNNLISGFRNLG 709

Query: 458 NEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYT 517
             +A + L  + V+ G+  D+  Y  +I    K   +  A  L++ +   GI+ D ++Y 
Sbjct: 710 KMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNLILASDLYSELLALGIVPDEILYV 769

Query: 518 SLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSH--VVDR 575
            L     + G+    S +L++M ++     + IY +  A + ++  + + F  H  ++++
Sbjct: 770 VLVNGLSKKGQFVRASKMLEEMKKKDATPNVLIYSTVIAGHHREGNLNEAFRVHDEMLEK 829

Query: 576 GLM 578
           GL+
Sbjct: 830 GLV 832



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 138/576 (23%), Positives = 247/576 (42%), Gaps = 79/576 (13%)

Query: 82  WTMIHILTKNKH-FKSAQNMLEKIALRDFLSTPSVL-NALVKIHD--DPDGNSHVLSWLV 137
           W +IHIL  + H    A N+L      +    PS + N LV      D + +S   ++L+
Sbjct: 117 WVLIHILFSSPHTHDRASNLLVMFVSSNPTLIPSAMVNNLVDSSKRFDFELSSRAFNYLL 176

Query: 138 IFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVV 197
             Y   +     +  F+ M   N++P +     +L+SL +  L D   ++Y KMV +GV 
Sbjct: 177 NAYIRNRRMDYAVDCFNLMVDRNVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVA 236

Query: 198 A-NIH----------------------------------LYNVLIHACCKSSDVDKVEKL 222
             N+                                   L+++ + A CK  D+     L
Sbjct: 237 GDNVTTQLLMRASLRERKPEEAMKIFRRVMSRGAEPDGLLFSLAVQAACKMKDLVMALDL 296

Query: 223 LCEMEFK-DVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFC 281
           L EM  K  V A   TY ++I    K+G   EA+ V+D M   GI   ++   SLI GFC
Sbjct: 297 LREMREKGGVPASQETYTSVIVACVKEGNMEEAVKVKDEMVGFGIPMSVIAATSLITGFC 356

Query: 282 REGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVV 339
               + +A   F  +  +G  P+ V ++ +I+ +C+  ++E+A+ + + M + G+ P  V
Sbjct: 357 NGNELGKALDFFNRMEEEGLAPDKVMFSVMIEWFCKNMEMEKAVEIYKRMKSVGIAPSSV 416

Query: 340 TY----------------------------------NSILRKLCKEGRIRDANRLLNEMN 365
                                               N I   LCK+G++  A   L  M 
Sbjct: 417 LVHKMIQGCLKAESPEAALEIFNDSFETWIAHGFMCNKIFLLLCKQGKVDAATSFLRMME 476

Query: 366 EKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMD 425
            K I P+ V  N ++ A+C++ +   A  + + MLE GL  + FTY  LI GF K ++  
Sbjct: 477 NKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLQPNNFTYSILIDGFFKNQDEQ 536

Query: 426 IAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFV-SRGLCVDVSVYRAL 484
            A E++  M+ + F  +   Y+ +++G C         ++L   +  +   +  + Y ++
Sbjct: 537 NAWEVINQMIASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMGCTSYNSI 596

Query: 485 IRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL 544
           I  F K+   D A   +  M  NGI  + V +TSL   + ++       +++ +M  + L
Sbjct: 597 IDGFFKEGDTDSAVEAYREMSENGISPNVVTFTSLINGFCKSNRMDLALEMIHEMKSKDL 656

Query: 545 MITLKIYRSFSASYAKDNEILDLF--WSHVVDRGLM 578
            + +  Y +    + K N++   +  +S +++ GLM
Sbjct: 657 KLDVPAYGALIDGFCKKNDMKTAYTLFSELLELGLM 692



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 127/488 (26%), Positives = 208/488 (42%), Gaps = 75/488 (15%)

Query: 125 DPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHAC-TVLLNSLAKDRLTDM 183
           +PDG   + S  V     +K     L +  +MR    +P      T ++ +  K+   + 
Sbjct: 271 EPDG--LLFSLAVQAACKMKDLVMALDLLREMREKGGVPASQETYTSVIVACVKEGNMEE 328

Query: 184 VWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIA 243
             KV  +MV  G+  ++     LI   C  +++ K       ME + +  D   ++ +I 
Sbjct: 329 AVKVKDEMVGFGIPMSVIAATSLITGFCNGNELGKALDFFNRMEEEGLAPDKVMFSVMIE 388

Query: 244 LYCKKGMHYEALAVQDRMEREGISPDIVTYNSLI-------------------------H 278
            +CK     +A+ +  RM+  GI+P  V  + +I                         H
Sbjct: 389 WFCKNMEMEKAVEIYKRMKSVGIAPSSVLVHKMIQGCLKAESPEAALEIFNDSFETWIAH 448

Query: 279 GF---------CREG---------RMRE--------------------------ARRLFR 294
           GF         C++G         RM E                          AR +F 
Sbjct: 449 GFMCNKIFLLLCKQGKVDAATSFLRMMENKGIEPNVVFYNNMMLAHCRMKNMDLARSIFS 508

Query: 295 DI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEG 352
           ++  KG  PN+ TY+ LIDG+ +  D + A  +   M A       V YN+I+  LCK G
Sbjct: 509 EMLEKGLQPNNFTYSILIDGFFKNQDEQNAWEVINQMIASNFEANEVIYNTIINGLCKVG 568

Query: 353 RIRDANRLL-NEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
           +   A  +L N + EK+ +    + N++I+ + K GDT SA++    M E G+  +  T+
Sbjct: 569 QTSKAKEMLQNLIKEKRYSMGCTSYNSIIDGFFKEGDTDSAVEAYREMSENGISPNVVTF 628

Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
            +LI+GFCK+  MD+A E++  M          +Y  L+DG+C KN+ +    L  E + 
Sbjct: 629 TSLINGFCKSNRMDLALEMIHEMKSKDLKLDVPAYGALIDGFCKKNDMKTAYTLFSELLE 688

Query: 472 RGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKA 531
            GL  +VSVY  LI  F    K+D A  L+  M  +GI  D   YT++     + G    
Sbjct: 689 LGLMPNVSVYNNLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNLIL 748

Query: 532 CSDILDDM 539
            SD+  ++
Sbjct: 749 ASDLYSEL 756



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 113/464 (24%), Positives = 202/464 (43%), Gaps = 76/464 (16%)

Query: 195 GVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEA 254
           GV A+   Y  +I AC K  ++++  K+  EM    +   +    +LI  +C      +A
Sbjct: 305 GVPASQETYTSVIVACVKEGNMEEAVKVKDEMVGFGIPMSVIAATSLITGFCNGNELGKA 364

Query: 255 LAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDG 312
           L   +RME EG++PD V ++ +I  FC+   M +A  +++ +K  G  P+ V    +I G
Sbjct: 365 LDFFNRMEEEGLAPDKVMFSVMIEWFCKNMEMEKAVEIYKRMKSVGIAPSSVLVHKMIQG 424

Query: 313 YCRANDLEEALRL----------------------------------REVMAAKGVYPGV 338
             +A   E AL +                                    +M  KG+ P V
Sbjct: 425 CLKAESPEAALEIFNDSFETWIAHGFMCNKIFLLLCKQGKVDAATSFLRMMENKGIEPNV 484

Query: 339 VTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNR 398
           V YN+++   C+   +  A  + +EM EK + P+N T + LI+ + K  D  +A +V N+
Sbjct: 485 VFYNNMMLAHCRMKNMDLARSIFSEMLEKGLQPNNFTYSILIDGFFKNQDEQNAWEVINQ 544

Query: 399 MLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGML----------------------- 435
           M+ +    ++  Y  +I+G CK  +   AKE+L  ++                       
Sbjct: 545 MIASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMGCTSYNSIIDGFFKEG 604

Query: 436 -------------DAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYR 482
                        + G SP+  +++ L++G+C  N  +  L+++ E  S+ L +DV  Y 
Sbjct: 605 DTDSAVEAYREMSENGISPNVVTFTSLINGFCKSNRMDLALEMIHEMKSKDLKLDVPAYG 664

Query: 483 ALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRR 542
           ALI  FCKK  +  A  LF+ +   G++ +  +Y +L   +   G+  A  D+   M   
Sbjct: 665 ALIDGFCKKNDMKTAYTLFSELLELGLMPNVSVYNNLISGFRNLGKMDAAIDLYKKMVND 724

Query: 543 RLMITLKIYRSFSASYAKDNEIL---DLFWSHVVDRGLMSKHIF 583
            +   L  Y +      KD  ++   DL +S ++  G++   I 
Sbjct: 725 GISCDLFTYTTMIDGLLKDGNLILASDL-YSELLALGIVPDEIL 767



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 96/357 (26%), Positives = 179/357 (50%), Gaps = 5/357 (1%)

Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
           D+   ++ +M++ G+  N   Y++LI    K+ D     +++ +M   +  A+   YNT+
Sbjct: 501 DLARSIFSEMLEKGLQPNNFTYSILIDGFFKNQDEQNAWEVINQMIASNFEANEVIYNTI 560

Query: 242 IALYCKKGMHYEALA-VQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--G 298
           I   CK G   +A   +Q+ ++ +  S    +YNS+I GF +EG    A   +R++   G
Sbjct: 561 INGLCKVGQTSKAKEMLQNLIKEKRYSMGCTSYNSIIDGFFKEGDTDSAVEAYREMSENG 620

Query: 299 ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDAN 358
            +PN VT+T+LI+G+C++N ++ AL +   M +K +   V  Y +++   CK+  ++ A 
Sbjct: 621 ISPNVVTFTSLINGFCKSNRMDLALEMIHEMKSKDLKLDVPAYGALIDGFCKKNDMKTAY 680

Query: 359 RLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGF 418
            L +E+ E  + P+    N LI+ +  +G   +A+ +  +M+  G+  D FTY  +I G 
Sbjct: 681 TLFSELLELGLMPNVSVYNNLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGL 740

Query: 419 CKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDV 478
            K   + +A +L   +L  G  P    Y  LV+G   K       K+L+E   +    +V
Sbjct: 741 LKDGNLILASDLYSELLALGIVPDEILYVVLVNGLSKKGQFVRASKMLEEMKKKDATPNV 800

Query: 479 SVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDI 535
            +Y  +I    ++  ++ A R+ + M   G++ D  I+  L     R  +P A + I
Sbjct: 801 LIYSTVIAGHHREGNLNEAFRVHDEMLEKGLVHDDTIFNLLVSG--RVEKPPAAAKI 855



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 75/151 (49%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N  V + L+  + NL      + ++ +M    +   L   T +++ L KD    +   +Y
Sbjct: 694 NVSVYNNLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNLILASDLY 753

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
            +++ LG+V +  LY VL++   K     +  K+L EM+ KD   ++  Y+T+IA + ++
Sbjct: 754 SELLALGIVPDEILYVVLVNGLSKKGQFVRASKMLEEMKKKDATPNVLIYSTVIAGHHRE 813

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHG 279
           G   EA  V D M  +G+  D   +N L+ G
Sbjct: 814 GNLNEAFRVHDEMLEKGLVHDDTIFNLLVSG 844


>gi|242067353|ref|XP_002448953.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
 gi|241934796|gb|EES07941.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
          Length = 734

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 120/464 (25%), Positives = 212/464 (45%), Gaps = 39/464 (8%)

Query: 126 PDGNSHVLSWLVIFYANLKMTQDGLQVFDQM---RVHNLMPHLHACTVLLNSLAKDRLTD 182
           PD  S+  S L+  + N    ++ L++   M      +  P++   T +++ L K +L D
Sbjct: 167 PDTVSY--SILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVTYTTVIDGLCKAQLFD 224

Query: 183 MVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLI 242
               V+++M+  GV  N   YN LIH         +V ++L +M  + ++ D +TY +L+
Sbjct: 225 RAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARGLKPDCYTYGSLL 284

Query: 243 --------------------------------ALYCKKGMHYEALAVQDRMEREGISPDI 270
                                           + Y K GM  +A+ + ++M + G+SP++
Sbjct: 285 NYLCALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNV 344

Query: 271 VTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
           V Y +LI   C+ GR+ +A   F  +  +G TPN V + +L+ G C  +  E A  L   
Sbjct: 345 VNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYE 404

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M  +G+ P  V +N+++  LC  GR+ +  RL++ M    + PD  +   LI+ YC  G 
Sbjct: 405 MLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGR 464

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
           T  A KV + M+  GL   + TY  L+HG+C A  +D A  L   ML  G +P   +Y+ 
Sbjct: 465 TDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNT 524

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG 508
           ++ G           +L    ++ G   D+  Y  ++   CK   VD A ++F  +   G
Sbjct: 525 ILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKG 584

Query: 509 ILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYR 552
           +  + + +T +  A  + G  +   D+   +    L+  +  YR
Sbjct: 585 LQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYR 628



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 124/433 (28%), Positives = 195/433 (45%), Gaps = 21/433 (4%)

Query: 84  MIHILTKNKHFKSAQNMLEKIALR----DFLSTPSVLN---ALVKIHD----------DP 126
           +IH       +K    MLEK++ R    D  +  S+LN   AL ++H            P
Sbjct: 248 LIHGYLSIGKWKEVVQMLEKMSARGLKPDCYTYGSLLNYLCALSEMHSFLDLMVENGLSP 307

Query: 127 DGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWK 186
           D   H+ +     YA   M    + +F++MR H L P++     L+++L K    D    
Sbjct: 308 D--HHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEV 365

Query: 187 VYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYC 246
            + +M+  GV  NI ++N L++  C     ++ E+L+ EM  + +  +   +NTLI   C
Sbjct: 366 KFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLC 425

Query: 247 KKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHV 304
             G   E   + D ME  G+ PD  +Y  LI G+C  GR  EA ++F  +   G +P  V
Sbjct: 426 NVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEV 485

Query: 305 TYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM 364
           TY TL+ GYC A+ +++A  L   M  KGV PGVVTYN+IL  L +  R  +A  L   M
Sbjct: 486 TYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNM 545

Query: 365 NEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEM 424
                  D  T N ++N  CK      A K+   +   GL L+  T+  +I    K    
Sbjct: 546 INSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRK 605

Query: 425 DIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRAL 484
           + A +L   +   G  P+  +Y  + +    + + E    L       G   +  +  AL
Sbjct: 606 EDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNAL 665

Query: 485 IRRFCKKEKVDYA 497
           +RR   +  +  A
Sbjct: 666 VRRLLHRGDISRA 678



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 111/420 (26%), Positives = 193/420 (45%), Gaps = 12/420 (2%)

Query: 153 FDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCK 212
            D M  + L P  H   +  ++ AK  + D    ++ KM Q G+  N+  Y  LI A CK
Sbjct: 297 LDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCK 356

Query: 213 SSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVT 272
              VD  E    +M  + V  ++  +N+L+   C       A  +   M  +GI P+ V 
Sbjct: 357 LGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVF 416

Query: 273 YNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMA 330
           +N+LI   C  GR+ E RRL   ++  G  P+  +YT LI GYC A   +EA ++ + M 
Sbjct: 417 FNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMV 476

Query: 331 AKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTA 390
           + G+ P  VTYN++L   C   RI DA  L  EM  K + P  VT NT+++   +    +
Sbjct: 477 SIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFS 536

Query: 391 SAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLV 450
            A ++   M+ +G   D +TY  +++G CK+  +D A ++   +   G   +  +++ ++
Sbjct: 537 EAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMI 596

Query: 451 DGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGIL 510
                   +E  + L     + GL  +V  YR +     ++  ++    LF+ M+ NG  
Sbjct: 597 GALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTA 656

Query: 511 GDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWS 570
            +S +  +L       G          D+ R    ++    R+FS   +  + ++ +F S
Sbjct: 657 PNSQMLNALVRRLLHRG----------DISRAGAYLSKLDERNFSVEASTTSLLISIFTS 706



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 127/476 (26%), Positives = 207/476 (43%), Gaps = 58/476 (12%)

Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSL-----------AKDRLTDMVWKVYKKMVQ--- 193
           D L++FD++ +H     + A   +LN++           +    +++V  ++ +MV+   
Sbjct: 32  DALKLFDELLIHARPASVVAFNQILNAVSRASRASGRRSSSTSESELVVSLFNRMVRECS 91

Query: 194 LGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYE 253
           + V  N   Y++LI   C+   +         +     R +    N L+   C      E
Sbjct: 92  IKVAPNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQLLKGLCDGKRVGE 151

Query: 254 ALAV-QDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI-----KGATPNHVTYT 307
           A+ V   RM   G +PD V+Y+ L+ GFC E R  EA  L R +     +   PN VTYT
Sbjct: 152 AMDVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVTYT 211

Query: 308 TLIDGYCRA---------------------NDL--------------EEALRLREVMAAK 332
           T+IDG C+A                     ND               +E +++ E M+A+
Sbjct: 212 TVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSAR 271

Query: 333 GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
           G+ P   TY S+L  LC    + + +  L+ M E  ++PD+   N   +AY K G    A
Sbjct: 272 GLKPDCYTYGSLLNYLCA---LSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKA 328

Query: 393 MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
           M + N+M + GL  +   Y ALI   CK   +D A+     M++ G +P+   ++ LV G
Sbjct: 329 MDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYG 388

Query: 453 YCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGD 512
            C  +  E   +L+ E + +G+C +   +  LI   C   +V   +RL +LM+  G+  D
Sbjct: 389 LCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPD 448

Query: 513 SVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLF 568
           +  YT L   Y  AG       + D M    L  T   Y +    Y   + I D +
Sbjct: 449 AFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAY 504



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 102/395 (25%), Positives = 170/395 (43%), Gaps = 13/395 (3%)

Query: 143 LKMTQDGLQVFDQMRVH-NLMPHLHACT-------VLLNSLAKDRLTDMVWKVYKKMVQ- 193
           LK   DG +V + M V    MP L  CT       +LL     +   +   ++ + M   
Sbjct: 140 LKGLCDGKRVGEAMDVLLQRMPEL-GCTPDTVSYSILLKGFCNENRAEEALELLRMMAND 198

Query: 194 --LGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMH 251
                  N+  Y  +I   CK+   D+ E +  +M    V+ +  TYN LI  Y   G  
Sbjct: 199 HGRSCPPNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKW 258

Query: 252 YEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLID 311
            E + + ++M   G+ PD  TY SL++  C    M     L  +  G +P+H  +     
Sbjct: 259 KEVVQMLEKMSARGLKPDCYTYGSLLNYLCALSEMHSFLDLMVE-NGLSPDHHIFNIFFS 317

Query: 312 GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAP 371
            Y +   +++A+ +   M   G+ P VV Y +++  LCK GR+ DA    N+M  + + P
Sbjct: 318 AYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTP 377

Query: 372 DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
           + V  N+L+   C +     A ++   ML+ G+  +   +  LI   C    +   + L+
Sbjct: 378 NIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLI 437

Query: 432 FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
             M   G  P   SY+ L+ GYC     +   K+ D  VS GL      Y  L+  +C  
Sbjct: 438 DLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSA 497

Query: 492 EKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRA 526
            ++D A  LF  M   G+    V Y ++ +  ++ 
Sbjct: 498 SRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQT 532



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/254 (25%), Positives = 111/254 (43%), Gaps = 25/254 (9%)

Query: 358 NRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHG 417
           NR++ E +  K+AP+  T + LI   C++G    +      +L+ G  ++      L+ G
Sbjct: 84  NRMVRECS-IKVAPNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQLLKG 142

Query: 418 FCKAKEMDIAKELLFG-MLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS---RG 473
            C  K +  A ++L   M + G +P   SYS L+ G+CN+N  E  L+LL    +   R 
Sbjct: 143 LCDGKRVGEAMDVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRS 202

Query: 474 LCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACS 533
              +V  Y  +I   CK +  D A+ +F  M  NG+  ++  Y  L + Y   G+ K   
Sbjct: 203 CPPNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVV 262

Query: 534 DILDDMYRRRLMITLKIYRSF------------------SASYAKDNEILDLFWSHVVDR 575
            +L+ M  R L      Y S                       + D+ I ++F+S     
Sbjct: 263 QMLEKMSARGLKPDCYTYGSLLNYLCALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKC 322

Query: 576 GLMSK--HIFKEMQ 587
           G++ K   IF +M+
Sbjct: 323 GMIDKAMDIFNKMR 336


>gi|449488099|ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Cucumis sativus]
          Length = 548

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 111/375 (29%), Positives = 188/375 (50%), Gaps = 4/375 (1%)

Query: 149 GLQVFDQMRVHNLMPH-LHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           GL+ F+  R H  + H  +   +L+ +L K  L D    V+  M   G++ +  +  +L+
Sbjct: 92  GLKFFEFSRTHLSINHTFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLV 151

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
            +  +   +D  +  L E+    ++   F YN L+ +  K+ +  EA+ +          
Sbjct: 152 SSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFV 211

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRL 325
           PD+ ++N LI G CR G + +A   F+++   G  P+ V+Y TLI+G+CR N++ +   L
Sbjct: 212 PDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDL 271

Query: 326 -REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
            +E M  KGV P V+TY SI+   CK G ++ A+ L +EM    I P++ T N LI+ + 
Sbjct: 272 LKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFG 331

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           K+G+  SAM +  +ML  G + D  T+ +LI G+C+  E++   +L   M     SP+  
Sbjct: 332 KVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVY 391

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
           +Y+ L++  C +N        L    S  +     +Y  +I  FCK  KVD A  +   M
Sbjct: 392 TYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEM 451

Query: 505 QGNGILGDSVIYTSL 519
           Q      D + +T L
Sbjct: 452 QEKKCRPDKITFTIL 466



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 119/453 (26%), Positives = 210/453 (46%), Gaps = 41/453 (9%)

Query: 11  TKFIKTISAIMLKGHWAKLLNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESA 70
           T F ++ S     G+ ++ LNP+IA         +V+    +    P L   FF+++ + 
Sbjct: 55  TLFFRSHSLNACFGYLSRNLNPSIA--------FEVIKRFSD----PLLGLKFFEFSRTH 102

Query: 71  VPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNS 130
           +     S+   +    +L +N         L K+ L D  S   V + +      PD  S
Sbjct: 103 L-----SINHTFNTYDLLMRN---------LCKVGLND--SAKIVFDCMRSDGILPD--S 144

Query: 131 HVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKK 190
            +L  LV  YA +          +++  + +         LLN L K  L D    ++++
Sbjct: 145 SILELLVSSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFRE 204

Query: 191 MVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCK--- 247
            ++   V +++ +N+LI   C+  ++DK  +    M       D+ +YNTLI  +C+   
Sbjct: 205 HLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNE 264

Query: 248 --KGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNH 303
             KG       +++ M  +G+SPD++TY S+I G+C+ G M+ A  LF ++   G  PN 
Sbjct: 265 ISKGHDL----LKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPND 320

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
            T+  LIDG+ +  ++  A+ + E M   G  P VVT+ S++   C+EG +    +L  E
Sbjct: 321 FTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEE 380

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
           M  + ++P+  T   LINA CK      A      +  + ++   F Y  +I GFCKA +
Sbjct: 381 MKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGK 440

Query: 424 MDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNK 456
           +D A  ++  M +    P   +++ L+ G C K
Sbjct: 441 VDEANFIVAEMQEKKCRPDKITFTILIIGNCMK 473



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 107/387 (27%), Positives = 179/387 (46%), Gaps = 3/387 (0%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           VFD MR   ++P      +L++S A+    D       ++   G+  +  +YN L++   
Sbjct: 131 VFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLV 190

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           K + VD+   L  E        D++++N LI   C+ G   +A      M   G  PDIV
Sbjct: 191 KQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIV 250

Query: 272 TYNSLIHGFCREGRMREARRLFRD---IKGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
           +YN+LI+GFCR   + +   L ++   IKG +P+ +TYT++I GYC+  D++ A  L + 
Sbjct: 251 SYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDE 310

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M + G+ P   T+N ++    K G +R A  +  +M      PD VT  +LI+ YC+ G+
Sbjct: 311 MVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGE 370

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
               +K+   M    L  + +TY  LI+  CK   +  A+  L  +  +   P    Y+ 
Sbjct: 371 VNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNP 430

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG 508
           ++DG+C     +    ++ E   +    D   +  LI   C K ++  A   F  M    
Sbjct: 431 VIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEIN 490

Query: 509 ILGDSVIYTSLAYAYWRAGEPKACSDI 535
            + D +   SL     +AG P   S I
Sbjct: 491 CVPDEITINSLISCLLKAGMPNEASQI 517



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 150/345 (43%), Gaps = 38/345 (11%)

Query: 237 TYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI 296
           TY+ L+   CK G++  A  V D M  +GI PD      L+  + R G++  A+    ++
Sbjct: 111 TYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEV 170

Query: 297 K--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRI 354
              G   +   Y  L++   + N ++EA+ L          P V ++N ++R LC+ G I
Sbjct: 171 HCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEI 230

Query: 355 RDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKV-KNRMLEAGLMLDQFTYKA 413
             A      M      PD V+ NTLIN +C++ + +    + K  ML  G+  D  TY +
Sbjct: 231 DKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTS 290

Query: 414 LIHGFCKAKEMDIAKELL--------------FGMLDAGFS------------------- 440
           +I G+CK  +M  A EL               F +L  GF                    
Sbjct: 291 IISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLG 350

Query: 441 --PSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQ 498
             P   +++ L+DGYC +      LKL +E   R L  +V  Y  LI   CK+ ++  A+
Sbjct: 351 CLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREAR 410

Query: 499 RLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRR 543
                ++ + ++    IY  +   + +AG+    + I+ +M  ++
Sbjct: 411 NFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKK 455



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 82/315 (26%), Positives = 147/315 (46%), Gaps = 26/315 (8%)

Query: 91  NKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGL 150
           +K F+  QNM       D +S  +++N   ++++   G                   D L
Sbjct: 231 DKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKG------------------HDLL 272

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDM--VWKVYKKMVQLGVVANIHLYNVLIH 208
           +  + M +  + P +   T +++   K  L DM    +++ +MV  G+  N   +NVLI 
Sbjct: 273 K--EDMLIKGVSPDVITYTSIISGYCK--LGDMKAASELFDEMVSSGIKPNDFTFNVLID 328

Query: 209 ACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISP 268
              K  ++     +  +M       D+ T+ +LI  YC++G   + L + + M+   +SP
Sbjct: 329 GFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSP 388

Query: 269 DIVTYNSLIHGFCREGRMREARRLFRDIKGA--TPNHVTYTTLIDGYCRANDLEEALRLR 326
           ++ TY  LI+  C+E R+REAR   R +K +   P    Y  +IDG+C+A  ++EA  + 
Sbjct: 389 NVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIV 448

Query: 327 EVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKI 386
             M  K   P  +T+  ++   C +GR+ +A     +M E    PD +T N+LI+   K 
Sbjct: 449 AEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKA 508

Query: 387 GDTASAMKVKNRMLE 401
           G    A ++K   L+
Sbjct: 509 GMPNEASQIKQAALQ 523



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/206 (23%), Positives = 98/206 (47%), Gaps = 2/206 (0%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N    + L+  +  +   +  + ++++M +   +P +   T L++   ++   +   K++
Sbjct: 319 NDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLW 378

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
           ++M    +  N++ Y VLI+A CK + + +    L  ++  +V    F YN +I  +CK 
Sbjct: 379 EEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKA 438

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTY 306
           G   EA  +   M+ +   PD +T+  LI G C +GRM EA   F  +      P+ +T 
Sbjct: 439 GKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDEITI 498

Query: 307 TTLIDGYCRANDLEEALRLREVMAAK 332
            +LI    +A    EA ++++    K
Sbjct: 499 NSLISCLLKAGMPNEASQIKQAALQK 524



 Score = 40.4 bits (93), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 27/97 (27%), Positives = 49/97 (50%), Gaps = 3/97 (3%)

Query: 479 SVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDD 538
           + Y  L+R  CK    D A+ +F+ M+ +GIL DS I   L  +Y R G+  +  + L++
Sbjct: 110 NTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNE 169

Query: 539 MYRRRLMITLKIYRSFSASYAKDN---EILDLFWSHV 572
           ++   + ++  +Y +      K N   E + LF  H+
Sbjct: 170 VHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHL 206


>gi|449446624|ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Cucumis sativus]
          Length = 548

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 111/375 (29%), Positives = 188/375 (50%), Gaps = 4/375 (1%)

Query: 149 GLQVFDQMRVHNLMPH-LHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
           GL+ F+  R H  + H  +   +L+ +L K  L D    V+  M   G++ +  +  +L+
Sbjct: 92  GLKFFEFSRTHLSINHTFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLV 151

Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
            +  +   +D  +  L E+    ++   F YN L+ +  K+ +  EA+ +          
Sbjct: 152 SSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFV 211

Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRL 325
           PD+ ++N LI G CR G + +A   F+++   G  P+ V+Y TLI+G+CR N++ +   L
Sbjct: 212 PDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDL 271

Query: 326 -REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
            +E M  KGV P V+TY SI+   CK G ++ A+ L +EM    I P++ T N LI+ + 
Sbjct: 272 LKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFG 331

Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
           K+G+  SAM +  +ML  G + D  T+ +LI G+C+  E++   +L   M     SP+  
Sbjct: 332 KVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVY 391

Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
           +Y+ L++  C +N        L    S  +     +Y  +I  FCK  KVD A  +   M
Sbjct: 392 TYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEM 451

Query: 505 QGNGILGDSVIYTSL 519
           Q      D + +T L
Sbjct: 452 QEKKCRPDKITFTIL 466



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 119/453 (26%), Positives = 210/453 (46%), Gaps = 41/453 (9%)

Query: 11  TKFIKTISAIMLKGHWAKLLNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESA 70
           T F ++ S     G+ ++ LNP+IA         +V+    +    P L   FF+++ + 
Sbjct: 55  TLFFRSHSLNACFGYLSRNLNPSIA--------FEVIKRFSD----PLLGLKFFEFSRTH 102

Query: 71  VPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNS 130
           +     S+   +    +L +N         L K+ L D  S   V + +      PD  S
Sbjct: 103 L-----SINHTFNTYDLLMRN---------LCKVGLND--SAKIVFDCMRSDGILPD--S 144

Query: 131 HVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKK 190
            +L  LV  YA +          +++  + +         LLN L K  L D    ++++
Sbjct: 145 SILELLVSSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFRE 204

Query: 191 MVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCK--- 247
            ++   V +++ +N+LI   C+  ++DK  +    M       D+ +YNTLI  +C+   
Sbjct: 205 HLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNE 264

Query: 248 --KGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNH 303
             KG       +++ M  +G+SPD++TY S+I G+C+ G M+ A  LF ++   G  PN 
Sbjct: 265 ISKGHDL----LKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPND 320

Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
            T+  LIDG+ +  ++  A+ + E M   G  P VVT+ S++   C+EG +    +L  E
Sbjct: 321 FTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEE 380

Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
           M  + ++P+  T   LINA CK      A      +  + ++   F Y  +I GFCKA +
Sbjct: 381 MKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGK 440

Query: 424 MDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNK 456
           +D A  ++  M +    P   +++ L+ G C K
Sbjct: 441 VDEANFIVAEMQEKKCRPDKITFTILIIGNCMK 473



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 107/387 (27%), Positives = 179/387 (46%), Gaps = 3/387 (0%)

Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
           VFD MR   ++P      +L++S A+    D       ++   G+  +  +YN L++   
Sbjct: 131 VFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLV 190

Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
           K + VD+   L  E        D++++N LI   C+ G   +A      M   G  PDIV
Sbjct: 191 KQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIV 250

Query: 272 TYNSLIHGFCREGRMREARRLFRD---IKGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
           +YN+LI+GFCR   + +   L ++   IKG +P+ +TYT++I GYC+  D++ A  L + 
Sbjct: 251 SYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDE 310

Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
           M + G+ P   T+N ++    K G +R A  +  +M      PD VT  +LI+ YC+ G+
Sbjct: 311 MVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGE 370

Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
               +K+   M    L  + +TY  LI+  CK   +  A+  L  +  +   P    Y+ 
Sbjct: 371 VNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNP 430

Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG 508
           ++DG+C     +    ++ E   +    D   +  LI   C K ++  A   F  M    
Sbjct: 431 VIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEIN 490

Query: 509 ILGDSVIYTSLAYAYWRAGEPKACSDI 535
            + D +   SL     +AG P   S I
Sbjct: 491 CVPDEITINSLISCLLKAGMPNEASQI 517



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 150/345 (43%), Gaps = 38/345 (11%)

Query: 237 TYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI 296
           TY+ L+   CK G++  A  V D M  +GI PD      L+  + R G++  A+    ++
Sbjct: 111 TYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEV 170

Query: 297 K--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRI 354
              G   +   Y  L++   + N ++EA+ L          P V ++N ++R LC+ G I
Sbjct: 171 HCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEI 230

Query: 355 RDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKV-KNRMLEAGLMLDQFTYKA 413
             A      M      PD V+ NTLIN +C++ + +    + K  ML  G+  D  TY +
Sbjct: 231 DKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTS 290

Query: 414 LIHGFCKAKEMDIAKELL--------------FGMLDAGFS------------------- 440
           +I G+CK  +M  A EL               F +L  GF                    
Sbjct: 291 IISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLG 350

Query: 441 --PSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQ 498
             P   +++ L+DGYC +      LKL +E   R L  +V  Y  LI   CK+ ++  A+
Sbjct: 351 CLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREAR 410

Query: 499 RLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRR 543
                ++ + ++    IY  +   + +AG+    + I+ +M  ++
Sbjct: 411 NFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKK 455



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 82/315 (26%), Positives = 147/315 (46%), Gaps = 26/315 (8%)

Query: 91  NKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGL 150
           +K F+  QNM       D +S  +++N   ++++   G                   D L
Sbjct: 231 DKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKG------------------HDLL 272

Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDM--VWKVYKKMVQLGVVANIHLYNVLIH 208
           +  + M +  + P +   T +++   K  L DM    +++ +MV  G+  N   +NVLI 
Sbjct: 273 K--EDMLIKGVSPDVITYTSIISGYCK--LGDMKAASELFDEMVSSGIKPNDFTFNVLID 328

Query: 209 ACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISP 268
              K  ++     +  +M       D+ T+ +LI  YC++G   + L + + M+   +SP
Sbjct: 329 GFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSP 388

Query: 269 DIVTYNSLIHGFCREGRMREARRLFRDIKGA--TPNHVTYTTLIDGYCRANDLEEALRLR 326
           ++ TY  LI+  C+E R+REAR   R +K +   P    Y  +IDG+C+A  ++EA  + 
Sbjct: 389 NVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIV 448

Query: 327 EVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKI 386
             M  K   P  +T+  ++   C +GR+ +A     +M E    PD +T N+LI+   K 
Sbjct: 449 AEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKA 508

Query: 387 GDTASAMKVKNRMLE 401
           G    A ++K   L+
Sbjct: 509 GMPNEASQIKQAALQ 523



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/206 (23%), Positives = 98/206 (47%), Gaps = 2/206 (0%)

Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
           N    + L+  +  +   +  + ++++M +   +P +   T L++   ++   +   K++
Sbjct: 319 NDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLW 378

Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
           ++M    +  N++ Y VLI+A CK + + +    L  ++  +V    F YN +I  +CK 
Sbjct: 379 EEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKA 438

Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTY 306
           G   EA  +   M+ +   PD +T+  LI G C +GRM EA   F  +      P+ +T 
Sbjct: 439 GKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDEITI 498

Query: 307 TTLIDGYCRANDLEEALRLREVMAAK 332
            +LI    +A    EA ++++    K
Sbjct: 499 NSLISCLLKAGMPNEASQIKQAALQK 524



 Score = 40.4 bits (93), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 27/97 (27%), Positives = 49/97 (50%), Gaps = 3/97 (3%)

Query: 479 SVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDD 538
           + Y  L+R  CK    D A+ +F+ M+ +GIL DS I   L  +Y R G+  +  + L++
Sbjct: 110 NTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNE 169

Query: 539 MYRRRLMITLKIYRSFSASYAKDN---EILDLFWSHV 572
           ++   + ++  +Y +      K N   E + LF  H+
Sbjct: 170 VHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHL 206


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.324    0.136    0.415 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,873,299,652
Number of Sequences: 23463169
Number of extensions: 359588653
Number of successful extensions: 1290100
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 7301
Number of HSP's successfully gapped in prelim test: 5451
Number of HSP's that attempted gapping in prelim test: 1047229
Number of HSP's gapped (non-prelim): 75894
length of query: 591
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 443
effective length of database: 8,886,646,355
effective search space: 3936784335265
effective search space used: 3936784335265
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 80 (35.4 bits)