BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048533
(591 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FKR3|PP404_ARATH Pentatricopeptide repeat-containing protein At5g38730
OS=Arabidopsis thaliana GN=At5g38730 PE=2 SV=1
Length = 596
Score = 753 bits (1945), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/591 (61%), Positives = 456/591 (77%), Gaps = 6/591 (1%)
Query: 1 MASLVALNSDTKFIKTISAIMLKGHWAKLLNPNIASSLTSTAIHKVL---LNLYNCCHIP 57
M +L++ N + ++I A +LKG+W +L + S L +AI + L+L++ P
Sbjct: 1 MVNLLSANREALIAQSICATVLKGNWKNILKHKVDSGLLKSAITTQVISELSLFSGYGGP 60
Query: 58 SLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLN 117
SLS +FF W +S +P+ KHSLQS W MI ILTK+KHFK+A +L+K+A R+ LS+P VL
Sbjct: 61 SLSWSFFIWTDS-LPSSKHSLQSSWKMILILTKHKHFKTAHQLLDKLAQRELLSSPLVLR 119
Query: 118 ALVK-IHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLA 176
+LV + +DP+ SHV SWL+I+YA M D + VF+Q+R L PHL ACTVLLNSL
Sbjct: 120 SLVGGVSEDPEDVSHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLV 179
Query: 177 KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLF 236
K RLTD VWK++KKMV+LGVVANIH+YNVL+HAC KS D +K EKLL EME K V D+F
Sbjct: 180 KQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIF 239
Query: 237 TYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI 296
TYNTLI++YCKK MH+EAL+VQDRMER G++P+IVTYNS IHGF REGRMREA RLFR+I
Sbjct: 240 TYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREI 299
Query: 297 KG-ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIR 355
K T NHVTYTTLIDGYCR ND++EALRLREVM ++G PGVVTYNSILRKLC++GRIR
Sbjct: 300 KDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIR 359
Query: 356 DANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALI 415
+ANRLL EM+ KKI PDN+TCNTLINAYCKI D SA+KVK +M+E+GL LD ++YKALI
Sbjct: 360 EANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALI 419
Query: 416 HGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLC 475
HGFCK E++ AKE LF M++ GFSP Y +YSWLVDG+ N+N ++ + KLL+EF RGLC
Sbjct: 420 HGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLC 479
Query: 476 VDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDI 535
DV++YR LIRR CK E+VDYA+ LF M+ G++GDSVI+T++AYAYWR G+ S +
Sbjct: 480 ADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASAL 539
Query: 536 LDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKEM 586
D MY RRLM+ LK+Y+S SASYA DN++L FWSHV DR L+SK I +EM
Sbjct: 540 FDVMYNRRLMVNLKLYKSISASYAGDNDVLRFFWSHVGDRCLISKSILREM 590
>sp|O04491|PPR26_ARATH Putative pentatricopeptide repeat-containing protein At1g09680
OS=Arabidopsis thaliana GN=At1g09680 PE=3 SV=1
Length = 607
Score = 259 bits (661), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 147/500 (29%), Positives = 265/500 (53%), Gaps = 9/500 (1%)
Query: 32 PNIASSLTSTAIHKV--LLNLYNCCHIPSLSC-AFFKWAESAVPNYKHSLQSHWTMIHIL 88
P+I L S ++H V L+N +N +P S AFFK+ S P ++ ++++++ + L
Sbjct: 71 PSIRKVLPSLSVHHVVDLIN-HNPLSLPQRSIFAFFKFISSQ-PGFRFTVETYFVLARFL 128
Query: 89 TKNKHFKSAQNMLEKIALRDFL-STPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQ 147
++ F AQ+++E + R S SV +LV++ P ++ L+I Y +L
Sbjct: 129 AVHEMFTEAQSLIELVVSRKGKNSASSVFISLVEMRVTP-MCGFLVDALMITYTDLGFIP 187
Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
D +Q F R H + C LL+ + K T +W Y +++ G N++++N+L+
Sbjct: 188 DAIQCFRLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILM 247
Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
+ CK ++ +K+ E+ + ++ + ++NTLI YCK G E ++ +ME+
Sbjct: 248 NKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTR 307
Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
PD+ TY++LI+ C+E +M A LF ++ +G PN V +TTLI G+ R +++
Sbjct: 308 PDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKES 367
Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
+ M +KG+ P +V YN+++ CK G + A +++ M + + PD +T TLI+ +C+
Sbjct: 368 YQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCR 427
Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
GD +A++++ M + G+ LD+ + AL+ G CK + A+ L ML AG P +
Sbjct: 428 GGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVT 487
Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
Y+ ++D +C K + + KLL E S G V Y L+ CK ++ A L + M
Sbjct: 488 YTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAML 547
Query: 506 GNGILGDSVIYTSLAYAYWR 525
G++ D + Y +L + R
Sbjct: 548 NIGVVPDDITYNTLLEGHHR 567
Score = 123 bits (309), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 128/241 (53%), Gaps = 3/241 (1%)
Query: 327 EVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKI 386
E++ A G V +N ++ K CKEG I DA ++ +E+ ++ + P V+ NTLIN YCK+
Sbjct: 230 EILDA-GFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKV 288
Query: 387 GDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSY 446
G+ ++K++M ++ D FTY ALI+ CK +MD A L M G P+ +
Sbjct: 289 GNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIF 348
Query: 447 SWLVDGYCNKNNEEALLK-LLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
+ L+ G+ ++N E L+K + +S+GL D+ +Y L+ FCK + A+ + + M
Sbjct: 349 TTLIHGH-SRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMI 407
Query: 506 GNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEIL 565
G+ D + YT+L + R G+ + +I +M + + + + + K+ ++
Sbjct: 408 RRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVI 467
Query: 566 D 566
D
Sbjct: 468 D 468
Score = 120 bits (301), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 119/244 (48%)
Query: 298 GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDA 357
G N + L++ +C+ ++ +A ++ + + + + P VV++N+++ CK G + +
Sbjct: 235 GFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEG 294
Query: 358 NRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHG 417
RL ++M + + PD T + LINA CK A + + M + GL+ + + LIHG
Sbjct: 295 FRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHG 354
Query: 418 FCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVD 477
+ E+D+ KE ML G P Y+ LV+G+C + A ++D + RGL D
Sbjct: 355 HSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPD 414
Query: 478 VSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILD 537
Y LI FC+ V+ A + M NGI D V +++L + G L
Sbjct: 415 KITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALR 474
Query: 538 DMYR 541
+M R
Sbjct: 475 EMLR 478
Score = 83.6 bits (205), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 91/190 (47%)
Query: 376 CNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGML 435
C L++ K+ T + +L+AG L+ + + L++ FCK + A+++ +
Sbjct: 208 CGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEIT 267
Query: 436 DAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVD 495
P+ S++ L++GYC N + +L + DV Y ALI CK+ K+D
Sbjct: 268 KRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMD 327
Query: 496 YAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFS 555
A LF+ M G++ + VI+T+L + + R GE + M + L + +Y +
Sbjct: 328 GAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLV 387
Query: 556 ASYAKDNEIL 565
+ K+ +++
Sbjct: 388 NGFCKNGDLV 397
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 256 bits (655), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 152/556 (27%), Positives = 268/556 (48%), Gaps = 4/556 (0%)
Query: 31 NPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTK 90
N N+ + L V+ LY C + +L F PN+KH+ S MIHIL +
Sbjct: 66 NNNVRNHLIRLNPLAVVEVLYRCRNDLTLGQRFVDQLGFHFPNFKHTSLSLSAMIHILVR 125
Query: 91 NKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGL 150
+ AQ+ L ++ R +S ++N+L + N V L+ Y + ++
Sbjct: 126 SGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIRTYVQARKLREAH 185
Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
+ F +R + AC L+ SL + ++ W VY+++ + GV N++ N++++A
Sbjct: 186 EAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNAL 245
Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
CK ++KV L +++ K V D+ TYNTLI+ Y KG+ EA + + M +G SP +
Sbjct: 246 CKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGV 305
Query: 271 VTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
TYN++I+G C+ G+ A+ +F ++ G +P+ TY +L+ C+ D+ E ++
Sbjct: 306 YTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSD 365
Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
M ++ V P +V ++S++ + G + A N + E + PDNV LI YC+ G
Sbjct: 366 MRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGM 425
Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
+ AM ++N ML+ G +D TY ++HG CK K + A +L M + P + +
Sbjct: 426 ISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTI 485
Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG 508
L+DG+C N + ++L + + + +DV Y L+ F K +D A+ ++ M
Sbjct: 486 LIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKE 545
Query: 509 ILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD-- 566
IL + Y+ L A G + D+M + + T+ I S Y + D
Sbjct: 546 ILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGE 605
Query: 567 LFWSHVVDRGLMSKHI 582
F ++ G + I
Sbjct: 606 SFLEKMISEGFVPDCI 621
Score = 179 bits (453), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 117/447 (26%), Positives = 210/447 (46%), Gaps = 41/447 (9%)
Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
L+ Y++ + ++ ++ + M P ++ ++N L K + +V+ +M++ G
Sbjct: 276 LISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSG 335
Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADL---------FT--------- 237
+ + Y L+ CK DV + EK+ +M +DV DL FT
Sbjct: 336 LSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKAL 395
Query: 238 -----------------YNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGF 280
Y LI YC+KGM A+ +++ M ++G + D+VTYN+++HG
Sbjct: 396 MYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGL 455
Query: 281 CREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGV 338
C+ + EA +LF ++ + P+ T T LIDG+C+ +L+ A+ L + M K + V
Sbjct: 456 CKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDV 515
Query: 339 VTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNR 398
VTYN++L K G I A + +M K+I P ++ + L+NA C G A A +V +
Sbjct: 516 VTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDE 575
Query: 399 MLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNN 458
M+ + ++I G+C++ + L M+ GF P SY+ L+ G+ + N
Sbjct: 576 MISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREEN 635
Query: 459 EE---ALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVI 515
L+K ++E GL DV Y +++ FC++ ++ A+ + M G+ D
Sbjct: 636 MSKAFGLVKKMEE-EQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRST 694
Query: 516 YTSLAYAYWRAGEPKACSDILDDMYRR 542
YT + + I D+M +R
Sbjct: 695 YTCMINGFVSQDNLTEAFRIHDEMLQR 721
Score = 174 bits (441), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 176/332 (53%), Gaps = 4/332 (1%)
Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
L F+ ++ L+P T+L+ + + + + +M+Q G ++ YN ++H
Sbjct: 395 LMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHG 454
Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
CK + + +KL EM + + D +T LI +CK G A+ + +M+ + I D
Sbjct: 455 LCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLD 514
Query: 270 IVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLRE 327
+VTYN+L+ GF + G + A+ ++ D+ K P ++Y+ L++ C L EA R+ +
Sbjct: 515 VVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWD 574
Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
M +K + P V+ NS+++ C+ G D L +M + PD ++ NTLI + +
Sbjct: 575 EMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREE 634
Query: 388 DTASAMKVKNRMLE--AGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
+ + A + +M E GL+ D FTY +++HGFC+ +M A+ +L M++ G +P +
Sbjct: 635 NMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRST 694
Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVD 477
Y+ +++G+ +++N ++ DE + RG D
Sbjct: 695 YTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 117 bits (293), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 158/343 (46%), Gaps = 23/343 (6%)
Query: 35 ASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHF 94
A + I+ +L+ Y C +S A E + ++ T++H L K K
Sbjct: 404 AGLIPDNVIYTILIQGY--CRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKML 461
Query: 95 KSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFD 154
A + ++ R PD S+ L+ L+ + L Q+ +++F
Sbjct: 462 GEADKLFNEMTERALF---------------PD--SYTLTILIDGHCKLGNLQNAMELFQ 504
Query: 155 QMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSS 214
+M+ + + LL+ K D +++ MV ++ Y++L++A C
Sbjct: 505 KMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKG 564
Query: 215 DVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYN 274
+ + ++ EM K+++ + N++I YC+ G + + ++M EG PD ++YN
Sbjct: 565 HLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYN 624
Query: 275 SLIHGFCREGRMREARRLFRDIK----GATPNHVTYTTLIDGYCRANDLEEALRLREVMA 330
+LI+GF RE M +A L + ++ G P+ TY +++ G+CR N ++EA + M
Sbjct: 625 TLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMI 684
Query: 331 AKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDN 373
+GV P TY ++ + + +A R+ +EM ++ +PD+
Sbjct: 685 ERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDD 727
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 248 bits (633), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 152/509 (29%), Positives = 252/509 (49%), Gaps = 10/509 (1%)
Query: 63 FFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFL----STPSVLNA 118
FF WA S +L+S +IH+ +K K AQ+++ R L S +
Sbjct: 107 FFDWARS---RRDSNLESLCIVIHLAVASKDLKVAQSLISSFWERPKLNVTDSFVQFFDL 163
Query: 119 LVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKD 178
LV + D + V + + ++ +VF++M + L+ + +C V L L+KD
Sbjct: 164 LVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKD 223
Query: 179 -RLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFT 237
T V+++ ++GV N+ YN++IH C+ + + LL ME K D+ +
Sbjct: 224 CYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVIS 283
Query: 238 YNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI- 296
Y+T++ YC+ G + + + M+R+G+ P+ Y S+I CR ++ EA F ++
Sbjct: 284 YSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMI 343
Query: 297 -KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIR 355
+G P+ V YTTLIDG+C+ D+ A + M ++ + P V+TY +I+ C+ G +
Sbjct: 344 RQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMV 403
Query: 356 DANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALI 415
+A +L +EM K + PD+VT LIN YCK G A +V N M++AG + TY LI
Sbjct: 404 EAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLI 463
Query: 416 HGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLC 475
G CK ++D A ELL M G P+ +Y+ +V+G C N E +KL+ EF + GL
Sbjct: 464 DGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLN 523
Query: 476 VDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDI 535
D Y L+ +CK ++D AQ + M G G+ V + L + G + +
Sbjct: 524 ADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKL 583
Query: 536 LDDMYRRRLMITLKIYRSFSASYAKDNEI 564
L+ M + + + S Y N +
Sbjct: 584 LNWMLAKGIAPNATTFNSLVKQYCIRNNL 612
Score = 226 bits (576), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 123/413 (29%), Positives = 218/413 (52%), Gaps = 2/413 (0%)
Query: 156 MRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSD 215
M + P + + + ++N + D VWK+ + M + G+ N ++Y +I C+
Sbjct: 272 MELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICK 331
Query: 216 VDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNS 275
+ + E+ EM + + D Y TLI +CK+G A M I+PD++TY +
Sbjct: 332 LAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTA 391
Query: 276 LIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKG 333
+I GFC+ G M EA +LF ++ KG P+ VT+T LI+GYC+A +++A R+ M G
Sbjct: 392 IISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAG 451
Query: 334 VYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAM 393
P VVTY +++ LCKEG + AN LL+EM + + P+ T N+++N CK G+ A+
Sbjct: 452 CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 511
Query: 394 KVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGY 453
K+ AGL D TY L+ +CK+ EMD A+E+L ML G P+ +++ L++G+
Sbjct: 512 KLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGF 571
Query: 454 CNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDS 513
C E KLL+ +++G+ + + + +L++++C + + A ++ M G+ D
Sbjct: 572 CLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDG 631
Query: 514 VIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
Y +L + +A K + +M + +++ Y + K + L+
Sbjct: 632 KTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLE 684
Score = 226 bits (575), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 151/537 (28%), Positives = 258/537 (48%), Gaps = 23/537 (4%)
Query: 26 WAKLLNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMI 85
+ K+LN + S+ S ++ L+ +C + F ++ E V ++ S+ +I
Sbjct: 198 FEKMLNYGLVLSVDSCNVYLTRLS-KDCYKTATAIIVFREFPEVGVC---WNVASYNIVI 253
Query: 86 HILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKM 145
H + + K A ++L + L+ + TP V++ S +V Y
Sbjct: 254 HFVCQLGRIKEAHHLLLLMELKGY--TPDVIS---------------YSTVVNGYCRFGE 296
Query: 146 TQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNV 205
++ + M+ L P+ + ++ L + + + +M++ G++ + +Y
Sbjct: 297 LDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTT 356
Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
LI CK D+ K EM +D+ D+ TY +I+ +C+ G EA + M +G
Sbjct: 357 LIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG 416
Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEAL 323
+ PD VT+ LI+G+C+ G M++A R+ + G +PN VTYTTLIDG C+ DL+ A
Sbjct: 417 LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSAN 476
Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
L M G+ P + TYNSI+ LCK G I +A +L+ E + D VT TL++AY
Sbjct: 477 ELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAY 536
Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY 443
CK G+ A ++ ML GL T+ L++GFC ++ ++LL ML G +P+
Sbjct: 537 CKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNA 596
Query: 444 CSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNL 503
+++ LV YC +NN +A + + SRG+ D Y L++ CK + A LF
Sbjct: 597 TTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQE 656
Query: 504 MQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAK 560
M+G G Y+ L + + + ++ D M R L +I+ FS + K
Sbjct: 657 MKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYK 713
Score = 87.0 bits (214), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 111/227 (48%), Gaps = 1/227 (0%)
Query: 341 YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK-IGDTASAMKVKNRM 399
++ + L G +R+A R+ +M + +CN + K TA+A+ V
Sbjct: 178 FDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREF 237
Query: 400 LEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNE 459
E G+ + +Y +IH C+ + A LL M G++P SYS +V+GYC
Sbjct: 238 PEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGEL 297
Query: 460 EALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
+ + KL++ +GL + +Y ++I C+ K+ A+ F+ M GIL D+V+YT+L
Sbjct: 298 DKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTL 357
Query: 520 AYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
+ + G+ +A S +M+ R + + Y + + + + ++++
Sbjct: 358 IDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVE 404
Score = 73.2 bits (178), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 105/254 (41%), Gaps = 1/254 (0%)
Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEG-RIRDANRLLNEMNEKKIAPDNVTCN 377
L EA R+ E M G+ V + N L +L K+ + A + E E + + + N
Sbjct: 191 LREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYN 250
Query: 378 TLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA 437
+I+ C++G A + M G D +Y +++G+C+ E+D +L+ M
Sbjct: 251 IVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRK 310
Query: 438 GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYA 497
G P+ Y ++ C + E + +G+ D VY LI FCK+ + A
Sbjct: 311 GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAA 370
Query: 498 QRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSAS 557
+ F M I D + YT++ + + G+ + +M+ + L +
Sbjct: 371 SKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELING 430
Query: 558 YAKDNEILDLFWSH 571
Y K + D F H
Sbjct: 431 YCKAGHMKDAFRVH 444
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 239 bits (611), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 155/535 (28%), Positives = 267/535 (49%), Gaps = 13/535 (2%)
Query: 22 LKGHWAKLLNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSH 81
LK H +L +++++ T A +LL N +L F WA P+ +L+
Sbjct: 32 LKRHPYQL--HHLSANFTPEAASNLLLKSQN---DQALILKFLNWAN---PHQFFTLRCK 83
Query: 82 WTMIHILTKNKHFKSAQNMLEKIALR--DFLSTPSVLNALVKIHDDPDGNSHVLSWLVIF 139
+HILTK K +K+AQ + E +A + D V +L + +D S V +V
Sbjct: 84 CITLHILTKFKLYKTAQILAEDVAAKTLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKS 143
Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKD-RLTDMVWKVYKKMVQLGVVA 198
Y+ L + L + + H MP + + +L++ + R V+K+M++ V
Sbjct: 144 YSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSP 203
Query: 199 NIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQ 258
N+ YN+LI C + ++D L +ME K ++ TYNTLI YCK + +
Sbjct: 204 NVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLL 263
Query: 259 DRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRA 316
M +G+ P++++YN +I+G CREGRM+E + ++ +G + + VTY TLI GYC+
Sbjct: 264 RSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKE 323
Query: 317 NDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTC 376
+ +AL + M G+ P V+TY S++ +CK G + A L++M + + P+ T
Sbjct: 324 GNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTY 383
Query: 377 NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD 436
TL++ + + G A +V M + G TY ALI+G C +M+ A +L M +
Sbjct: 384 TTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKE 443
Query: 437 AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDY 496
G SP SYS ++ G+C + + L++ E V +G+ D Y +LI+ FC++ +
Sbjct: 444 KGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKE 503
Query: 497 AQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIY 551
A L+ M G+ D YT+L AY G+ + + ++M + ++ + Y
Sbjct: 504 ACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTY 558
Score = 236 bits (603), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 123/355 (34%), Positives = 195/355 (54%), Gaps = 2/355 (0%)
Query: 149 GLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIH 208
L +FD+M +P++ L++ K R D +K+ + M G+ N+ YNV+I+
Sbjct: 224 ALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVIN 283
Query: 209 ACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISP 268
C+ + +V +L EM + D TYNTLI YCK+G ++AL + M R G++P
Sbjct: 284 GLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTP 343
Query: 269 DIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEALRLR 326
++TY SLIH C+ G M A ++G PN TYTTL+DG+ + + EA R+
Sbjct: 344 SVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVL 403
Query: 327 EVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKI 386
M G P VVTYN+++ C G++ DA +L +M EK ++PD V+ +T+++ +C+
Sbjct: 404 REMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRS 463
Query: 387 GDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSY 446
D A++VK M+E G+ D TY +LI GFC+ + A +L ML G P +Y
Sbjct: 464 YDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTY 523
Query: 447 SWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
+ L++ YC + + E L+L +E V +G+ DV Y LI K+ + A+RL
Sbjct: 524 TALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLL 578
Score = 202 bits (513), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 139/513 (27%), Positives = 240/513 (46%), Gaps = 72/513 (14%)
Query: 74 YKHSLQSHWTMIHILTKN---KHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNS 130
+K L+S + ++ T N + F A N+ + L D + T L +V + DG
Sbjct: 193 FKEMLESQVSP-NVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDG-- 249
Query: 131 HVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDR--------LTD 182
Y L+ DG ++ M + L P+L + V++N L ++ LT+
Sbjct: 250 ---------YCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTE 300
Query: 183 MVWKVYK---------------------------KMVQLGVVANIHLYNVLIHACCKSSD 215
M + Y +M++ G+ ++ Y LIH+ CK+ +
Sbjct: 301 MNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGN 360
Query: 216 VDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNS 275
+++ + L +M + + + TY TL+ + +KG EA V M G SP +VTYN+
Sbjct: 361 MNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNA 420
Query: 276 LIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKG 333
LI+G C G+M +A + D+K G +P+ V+Y+T++ G+CR+ D++EALR++ M KG
Sbjct: 421 LINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKG 480
Query: 334 VYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAM 393
+ P +TY+S+++ C++ R ++A L EM + PD T LINAYC GD A+
Sbjct: 481 IKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKAL 540
Query: 394 KVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGY 453
++ N M+E G++ D TY LI+G K AK LL + PS +Y L++
Sbjct: 541 QLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENC 600
Query: 454 CNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDS 513
N ++ +LI+ FC K + A ++F M G D
Sbjct: 601 SN--------------------IEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDG 640
Query: 514 VIYTSLAYAYWRAGEPKACSDILDDMYRRRLMI 546
Y + + + RAG+ + + +M + ++
Sbjct: 641 TAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLL 673
Score = 196 bits (499), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 125/442 (28%), Positives = 214/442 (48%), Gaps = 43/442 (9%)
Query: 178 DRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFT 237
D +V+K ++ L + ++++++ + + S +DK ++ + + +
Sbjct: 113 DEYASLVFKSLQETYDL-CYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLS 171
Query: 238 YNTLI--ALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF-- 293
YN ++ + K+ + + ++ +E + +SP++ TYN LI GFC G + A LF
Sbjct: 172 YNAVLDATIRSKRNISFAENVFKEMLESQ-VSPNVFTYNILIRGFCFAGNIDVALTLFDK 230
Query: 294 RDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGR 353
+ KG PN VTY TLIDGYC+ +++ +L MA KG+ P +++YN ++ LC+EGR
Sbjct: 231 METKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGR 290
Query: 354 IRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKA 413
+++ + +L EMN + + D VT NTLI YCK G+ A+ + ML GL TY +
Sbjct: 291 MKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTS 350
Query: 414 LIHGFCKAKEMDIAKELLFGML-----------------------------------DAG 438
LIH CKA M+ A E L M D G
Sbjct: 351 LIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNG 410
Query: 439 FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQ 498
FSPS +Y+ L++G+C E + +L++ +GL DV Y ++ FC+ VD A
Sbjct: 411 FSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEAL 470
Query: 499 RLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASY 558
R+ M GI D++ Y+SL + K D+ ++M R L Y + +Y
Sbjct: 471 RVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAY 530
Query: 559 AKDNEILDLFWSH--VVDRGLM 578
+ ++ H +V++G++
Sbjct: 531 CMEGDLEKALQLHNEMVEKGVL 552
Score = 122 bits (305), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 102/386 (26%), Positives = 174/386 (45%), Gaps = 38/386 (9%)
Query: 79 QSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVL--NALVKIHDDPDGNSHVLSWL 136
+++ T++ ++ + A +L ++ F +PSV+ NAL+ N H ++
Sbjct: 381 RTYTTLVDGFSQKGYMNEAYRVLREMNDNGF--SPSVVTYNALI--------NGHCVTG- 429
Query: 137 VIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGV 196
KM +D + V + M+ L P + + + +L+ + D +V ++MV+ G+
Sbjct: 430 -------KM-EDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGI 481
Query: 197 VANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALA 256
+ Y+ LI C+ + L EM + D FTY LI YC +G +AL
Sbjct: 482 KPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQ 541
Query: 257 VQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLID--- 311
+ + M +G+ PD+VTY+ LI+G ++ R REA+RL + + + P+ VTY TLI+
Sbjct: 542 LHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCS 601
Query: 312 ------------GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
G+C + EA ++ E M K P YN ++ C+ G IR A
Sbjct: 602 NIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYT 661
Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
L EM + VT L+ A K G V +L + + + K L+
Sbjct: 662 LYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINH 721
Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCS 445
+ MD+ ++L M GF P+ S
Sbjct: 722 REGNMDVVLDVLAEMAKDGFLPNGIS 747
>sp|Q9ZQF1|PP152_ARATH Pentatricopeptide repeat-containing protein At2g15630,
mitochondrial OS=Arabidopsis thaliana GN=At2g15630 PE=3
SV=1
Length = 627
Score = 234 bits (597), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 153/556 (27%), Positives = 259/556 (46%), Gaps = 21/556 (3%)
Query: 33 NIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNK 92
++A LT + + LL+L P+L+ F + + Y+ Q+ I +++K
Sbjct: 64 HVADKLTPSLVSTTLLSL---VKTPNLAFNFV----NHIDLYRLDFQTQCLAIAVISKLS 116
Query: 93 HFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVL-SWLVIFYANLKMTQDGLQ 151
K +L+++ S ++ + LV HD + S +L LV L+M + ++
Sbjct: 117 SPKPVTQLLKEVVTSRKNSIRNLFDELVLAHDRLETKSTILFDLLVRCCCQLRMVDEAIE 176
Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
F M+ P C +L L++ + W Y M ++ + +N++ +N++I+ C
Sbjct: 177 CFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLC 236
Query: 212 KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIV 271
K + K + L ME ++ + TYNTL+ + +G A + M+ +G PD+
Sbjct: 237 KEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQ 296
Query: 272 TYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAA 331
TYN ++ C EGR E R ++I G P+ V+Y LI G DLE A R+ M
Sbjct: 297 TYNPILSWMCNEGRASEVLREMKEI-GLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVK 355
Query: 332 KGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTAS 391
+G+ P TYN+++ L E +I A L+ E+ EK I D+VT N LIN YC+ GD
Sbjct: 356 QGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKK 415
Query: 392 AMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVD 451
A + + M+ G+ QFTY +LI+ C+ + A EL ++ G P + L+D
Sbjct: 416 AFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMD 475
Query: 452 GYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILG 511
G+C N + LL E + D Y L+R C + K + A+ L M+ GI
Sbjct: 476 GHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKP 535
Query: 512 DSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSH 571
D + Y +L Y + G+ K + D+M TL Y + +K+ E
Sbjct: 536 DHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQE-------- 587
Query: 572 VVDRGLMSKHIFKEMQ 587
G +++ + +EM+
Sbjct: 588 ----GELAEELLREMK 599
Score = 195 bits (496), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 125/407 (30%), Positives = 197/407 (48%), Gaps = 35/407 (8%)
Query: 75 KHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHD---------- 124
K ++ + MI++L K K A+ L + + T N LV+
Sbjct: 222 KSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARL 281
Query: 125 ----------DPDGNSH--VLSWLVIFYANLKMTQDGL--QVFDQMRVHNLMPHLHACTV 170
PD ++ +LSW M +G +V +M+ L+P + +
Sbjct: 282 IISEMKSKGFQPDMQTYNPILSW---------MCNEGRASEVLREMKEIGLVPDSVSYNI 332
Query: 171 LLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKD 230
L+ + + +M + +MV+ G+V + YN LIH + ++ E L+ E+ K
Sbjct: 333 LIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKG 392
Query: 231 VRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREAR 290
+ D TYN LI YC+ G +A A+ D M +GI P TY SLI+ CR+ + REA
Sbjct: 393 IVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREAD 452
Query: 291 RLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
LF + KG P+ V TL+DG+C +++ A L + M + P VTYN ++R L
Sbjct: 453 ELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGL 512
Query: 349 CKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ 408
C EG+ +A L+ EM + I PD+++ NTLI+ Y K GDT A V++ ML G
Sbjct: 513 CGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTL 572
Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCN 455
TY AL+ G K +E ++A+ELL M G P+ S+ +++ N
Sbjct: 573 LTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMSN 619
Score = 80.1 bits (196), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 121/281 (43%), Gaps = 20/281 (7%)
Query: 52 NCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLS 111
C + L AF E + ++ T+IH L ++A+ ++ +I + +
Sbjct: 336 GCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVL 395
Query: 112 TPSVLNALVK-------------IHDD--PDG---NSHVLSWLVIFYANLKMTQDGLQVF 153
N L+ +HD+ DG + L+ T++ ++F
Sbjct: 396 DSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELF 455
Query: 154 DQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKS 213
+++ + P L L++ D + + K+M + + + YN L+ C
Sbjct: 456 EKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGE 515
Query: 214 SDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTY 273
++ +L+ EM+ + ++ D +YNTLI+ Y KKG A V+D M G +P ++TY
Sbjct: 516 GKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTY 575
Query: 274 NSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDG 312
N+L+ G + A L R++K G PN ++ ++I+
Sbjct: 576 NALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEA 616
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 233 bits (595), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 149/517 (28%), Positives = 251/517 (48%), Gaps = 43/517 (8%)
Query: 37 SLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKS 96
+L + +VL+ L P L+ FFKW+ + +KHS++S+ + HIL + +
Sbjct: 105 TLAPIWVPRVLVELK---EDPKLAFKFFKWSMTR-NGFKHSVESYCIVAHILFCARMYYD 160
Query: 97 AQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQM 156
A ++L+++ L + V + L + V L +L M ++ +Q F +M
Sbjct: 161 ANSVLKEMVLSK--ADCDVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKM 218
Query: 157 RVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDV 216
+ + P +C N L+H K
Sbjct: 219 KRFRVFPKTRSC-----------------------------------NGLLHRFAKLGKT 243
Query: 217 DKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSL 276
D V++ +M R +FTYN +I CK+G A + + M+ G+ PD VTYNS+
Sbjct: 244 DDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSM 303
Query: 277 IHGFCREGRMREARRLFRDIKG--ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGV 334
I GF + GR+ + F ++K P+ +TY LI+ +C+ L L M G+
Sbjct: 304 IDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGL 363
Query: 335 YPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMK 394
P VV+Y++++ CKEG ++ A + +M + P+ T +LI+A CKIG+ + A +
Sbjct: 364 KPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFR 423
Query: 395 VKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYC 454
+ N ML+ G+ + TY ALI G C A+ M A+EL M AG P+ SY+ L+ G+
Sbjct: 424 LGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFV 483
Query: 455 NKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSV 514
N + L+LL+E RG+ D+ +Y I C EK++ A+ + N M+ GI +S+
Sbjct: 484 KAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSL 543
Query: 515 IYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIY 551
IYT+L AY+++G P +LD+M + +T+ +
Sbjct: 544 IYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTF 580
Score = 168 bits (426), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 118/468 (25%), Positives = 217/468 (46%), Gaps = 20/468 (4%)
Query: 75 KHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLS 134
+ ++ ++ MI + K ++A+ + E++ R + N+++ DG
Sbjct: 259 RPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMI------DG------ 306
Query: 135 WLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQL 194
+ + D + F++M+ P + L+N K + + Y++M
Sbjct: 307 -----FGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGN 361
Query: 195 GVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEA 254
G+ N+ Y+ L+ A CK + + K +M + + +TY +LI CK G +A
Sbjct: 362 GLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDA 421
Query: 255 LAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF--RDIKGATPNHVTYTTLIDG 312
+ + M + G+ ++VTY +LI G C RM+EA LF D G PN +Y LI G
Sbjct: 422 FRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHG 481
Query: 313 YCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPD 372
+ +A +++ AL L + +G+ P ++ Y + + LC +I A ++NEM E I +
Sbjct: 482 FVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKAN 541
Query: 373 NVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLF 432
++ TL++AY K G+ + + + M E + + T+ LI G CK K + A +
Sbjct: 542 SLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFN 601
Query: 433 GML-DAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
+ D G + ++ ++DG C N EA L ++ V +GL D + Y +L+ K+
Sbjct: 602 RISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQ 661
Query: 492 EKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
V A L + M G+ D + YTSL + + + L++M
Sbjct: 662 GNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEM 709
Score = 160 bits (404), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 94/320 (29%), Positives = 154/320 (48%), Gaps = 2/320 (0%)
Query: 237 TYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI 296
++ L ++ GM EA+ +M+R + P + N L+H F + G+ + +R F+D+
Sbjct: 194 VFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDM 253
Query: 297 --KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRI 354
GA P TY +ID C+ D+E A L E M +G+ P VTYNS++ K GR+
Sbjct: 254 IGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRL 313
Query: 355 RDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKAL 414
D EM + PD +T N LIN +CK G ++ M GL + +Y L
Sbjct: 314 DDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTL 373
Query: 415 IHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGL 474
+ FCK M A + M G P+ +Y+ L+D C N +L +E + G+
Sbjct: 374 VDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGV 433
Query: 475 CVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSD 534
+V Y ALI C E++ A+ LF M G++ + Y +L + + +A +
Sbjct: 434 EWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALE 493
Query: 535 ILDDMYRRRLMITLKIYRSF 554
+L+++ R + L +Y +F
Sbjct: 494 LLNELKGRGIKPDLLLYGTF 513
Score = 121 bits (304), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 97/375 (25%), Positives = 175/375 (46%), Gaps = 9/375 (2%)
Query: 134 SWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAK-DRLTDMVWKVYKKMV 192
S LV + M Q ++ + MR L+P+ + T L+++ K L+D +++ +M+
Sbjct: 371 STLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSD-AFRLGNEML 429
Query: 193 QLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHY 252
Q+GV N+ Y LI C + + + E+L +M+ V +L +YN LI + K
Sbjct: 430 QVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMD 489
Query: 253 EALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLI 310
AL + + ++ GI PD++ Y + I G C ++ A+ + ++K G N + YTTL+
Sbjct: 490 RALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLM 549
Query: 311 DGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM-NEKKI 369
D Y ++ + E L L + M + VVT+ ++ LCK + A N + N+ +
Sbjct: 550 DAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGL 609
Query: 370 APDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKE 429
+ +I+ CK +A + +M++ GL+ D+ Y +L+ G K + A
Sbjct: 610 QANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALA 669
Query: 430 LLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVD----VSVYRALI 485
L M + G +Y+ LV G + N + L+E + G+ D +SV +
Sbjct: 670 LRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHY 729
Query: 486 RRFCKKEKVDYAQRL 500
C E V+ L
Sbjct: 730 ELGCIDEAVELQSYL 744
Score = 100 bits (248), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/355 (23%), Positives = 163/355 (45%), Gaps = 20/355 (5%)
Query: 54 CHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTP 113
C I +LS AF E + ++ ++ +I L + K A+ + K+ +
Sbjct: 413 CKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNL 472
Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
+ NAL IH + K L++ ++++ + P L +
Sbjct: 473 ASYNAL--IHG---------------FVKAKNMDRALELLNELKGRGIKPDLLLYGTFIW 515
Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
L + V +M + G+ AN +Y L+ A KS + + LL EM+ D+
Sbjct: 516 GLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEV 575
Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMERE-GISPDIVTYNSLIHGFCREGRMREARRL 292
+ T+ LI CK + +A+ +R+ + G+ + + ++I G C++ ++ A L
Sbjct: 576 TVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTL 635
Query: 293 FRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
F + KG P+ YT+L+DG + ++ EAL LR+ MA G+ ++ Y S++ L
Sbjct: 636 FEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSH 695
Query: 351 EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLM 405
+++ A L EM + I PD V C +++ + ++G A+++++ +++ L+
Sbjct: 696 CNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMKHQLL 750
Score = 89.4 bits (220), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 103/233 (44%)
Query: 336 PGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKV 395
PG ++++ L G + +A + ++M ++ P +CN L++ + K+G T +
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 249
Query: 396 KNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCN 455
M+ AG FTY +I CK +++ A+ L M G P +Y+ ++DG+
Sbjct: 250 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 309
Query: 456 KNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVI 515
+ + +E DV Y ALI FCK K+ + M+GNG+ + V
Sbjct: 310 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 369
Query: 516 YTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLF 568
Y++L A+ + G + DM R L+ Y S + K + D F
Sbjct: 370 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAF 422
>sp|Q9FLJ4|PP440_ARATH Pentatricopeptide repeat-containing protein At5g61400
OS=Arabidopsis thaliana GN=At5g61400 PE=2 SV=1
Length = 654
Score = 233 bits (593), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 149/489 (30%), Positives = 246/489 (50%), Gaps = 12/489 (2%)
Query: 63 FFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALR-DFLSTPS-----VL 116
F+ + + + + LQS +IH+LT + A+ +++ + R S PS +
Sbjct: 60 LFETSSRSRVSKSNDLQSFSAVIHVLTGAHKYTLARCLIKSLIERLKRHSEPSNMSHRLF 119
Query: 117 NALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLA 176
NAL I P + V S L++ + + + ++ L V +M+ P AC +LN L
Sbjct: 120 NALEDIQS-PKFSIGVFSLLIMEFLEMGLFEEALWVSREMKCS---PDSKACLSILNGLV 175
Query: 177 KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLF 236
+ R D VW Y+ M+ G+V ++H+Y VL C K K EKLL EM ++ +++
Sbjct: 176 RRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVY 235
Query: 237 TYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI 296
Y I C+ EA + + M++ G+ P++ TY+++I G+C+ G +R+A L+++I
Sbjct: 236 IYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEI 295
Query: 297 KGAT--PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRI 354
A PN V + TL+DG+C+A +L A L M GV P + YN ++ CK G +
Sbjct: 296 LVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNM 355
Query: 355 RDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKAL 414
+A LL+EM ++PD T LIN C A A ++ +M + TY +L
Sbjct: 356 LEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSL 415
Query: 415 IHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGL 474
IHG+CK M+ A +L M +G P+ ++S L+DGYCN + +A + L E +G+
Sbjct: 416 IHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGI 475
Query: 475 CVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSD 534
DV Y ALI K+ + A RL++ M GI + + L +W+ G D
Sbjct: 476 VPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAID 535
Query: 535 ILDDMYRRR 543
+ ++R
Sbjct: 536 FYQENNQQR 544
Score = 171 bits (433), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 180/362 (49%), Gaps = 2/362 (0%)
Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
N + S ++ Y + ++ ++ V L+P++ L++ K R ++
Sbjct: 268 NLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLF 327
Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
MV+ GV N+++YN LIH CKS ++ + LL EME ++ D+FTY LI C +
Sbjct: 328 VHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIE 387
Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTY 306
EA + +M+ E I P TYNSLIHG+C+E M +A L ++ G PN +T+
Sbjct: 388 DQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITF 447
Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
+TLIDGYC D++ A+ L M KG+ P VVTY +++ KE +++A RL ++M E
Sbjct: 448 STLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLE 507
Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
I P++ T L++ + K G + A+ + + + LI G C+ +
Sbjct: 508 AGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILR 567
Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
A M G +P CSY ++ G+ + + L + + G+ ++ V + L R
Sbjct: 568 ASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLVNQLLAR 627
Query: 487 RF 488
+
Sbjct: 628 FY 629
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 142/328 (43%), Gaps = 39/328 (11%)
Query: 107 RDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLH 166
R+ ++ S+ +VK DP N +V + L+ + + + + +M NL P +
Sbjct: 318 RELVTARSLFVHMVKFGVDP--NLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVF 375
Query: 167 ACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEM 226
T+L+N L + ++++KM + + YN LIH CK ++++ L EM
Sbjct: 376 TYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEM 435
Query: 227 EFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRM 286
V ++ T++TLI YC A+ + M +GI PD+VTY +LI +E M
Sbjct: 436 TASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANM 495
Query: 287 REARRLFRDI--KGATPN-----------------------------------HVTYTTL 309
+EA RL+ D+ G PN HV +T L
Sbjct: 496 KEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCL 555
Query: 310 IDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKI 369
I+G C+ + A R M + G+ P + +Y S+L+ +E RI D L +M + I
Sbjct: 556 IEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGI 615
Query: 370 APDNVTCNTLINAYCKIGDTASAMKVKN 397
P+ + L Y G SA + N
Sbjct: 616 LPNLLVNQLLARFYQANGYVKSACFLTN 643
Score = 33.9 bits (76), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 33/192 (17%), Positives = 76/192 (39%), Gaps = 37/192 (19%)
Query: 423 EMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYR 482
EM + +E L+ + SP + +++G + +++ +SRGL DV +Y
Sbjct: 144 EMGLFEEALWVSREMKCSPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYF 203
Query: 483 AL-----------------------------------IRRFCKKEKVDYAQRLFNLMQGN 507
L I C+ K++ A+++F LM+ +
Sbjct: 204 VLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKH 263
Query: 508 GILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDL 567
G+L + Y+++ Y + G + + ++ L+ + ++ + + K E++
Sbjct: 264 GVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTA 323
Query: 568 --FWSHVVDRGL 577
+ H+V G+
Sbjct: 324 RSLFVHMVKFGV 335
>sp|Q8S8P6|PP180_ARATH Pentatricopeptide repeat-containing protein At2g32630
OS=Arabidopsis thaliana GN=At2g32630 PE=3 SV=1
Length = 624
Score = 226 bits (575), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 158/530 (29%), Positives = 263/530 (49%), Gaps = 14/530 (2%)
Query: 3 SLVALNSDTKFIKTISAIML-KGHWAKLL-NPNIASSLTSTAIHKVLLNLYNCCHIPSLS 60
S V L+SD + + I+A ++ K KL NP++ +L S VL +P+ S
Sbjct: 23 SPVLLSSDQEAARRITACLVEKSTIGKLQSNPSLLFNLNSNVTRLVLSE----PTLPTQS 78
Query: 61 CA-FFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTP--SVLN 117
C FFK N K L + T+ H L N+ F +++L + F P + +
Sbjct: 79 CIDFFKLLREFESNLKPDLTAVVTLSHRLYSNRRFNEMRSLLNSVVNDGFYKRPVEELGS 138
Query: 118 ALVK--IHDDPDGNSHVLSWLVI-FYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNS 174
A+V I ++ LV Y + M ++GL+VFD M L +C V L +
Sbjct: 139 AMVDCDISEEKFEFFEKFFDLVFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVA 198
Query: 175 LAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRAD 234
K R D+ +++++MV GV ++ +++ C+ +V+K +KL+ E K ++ +
Sbjct: 199 AKKRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPE 258
Query: 235 LFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR 294
+TYNT+I Y K+ V M+++G+ + VTY L+ + G+M +A +LF
Sbjct: 259 AYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFD 318
Query: 295 DIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEG 352
+++ G + YT+LI CR +++ A L + + KG+ P TY +++ +CK G
Sbjct: 319 EMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVG 378
Query: 353 RIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYK 412
+ A L+NEM K + V NTLI+ YC+ G A + + M + G D FT
Sbjct: 379 EMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCN 438
Query: 413 ALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSR 472
+ F + K D AK+ LF M++ G S SY+ L+D YC + N E +L E S+
Sbjct: 439 TIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSK 498
Query: 473 GLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYA 522
G+ + Y +I +CK+ K+ A++L M+ NG+ DS YTSL +
Sbjct: 499 GVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHG 548
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 64/142 (45%)
Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
L+ Y ++ ++F +M + P+ V++ + K K+ M G
Sbjct: 475 LIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANG 534
Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
+ + + Y LIH C + +VD+ +L EM K + + TY +I+ K G EA
Sbjct: 535 MDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAF 594
Query: 256 AVQDRMEREGISPDIVTYNSLI 277
+ D M+R+G + D Y +LI
Sbjct: 595 GLYDEMKRKGYTIDNKVYTALI 616
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 226 bits (575), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 143/521 (27%), Positives = 236/521 (45%), Gaps = 39/521 (7%)
Query: 59 LSCAFFKWA-ESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLN 117
L+ F KW + H +Q HIL + + + A+++L++++L S+ V
Sbjct: 52 LALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSLMSGKSS-FVFG 110
Query: 118 ALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAK 177
AL+ + + N V L+ Y M QD L++F M ++ P ++ C +L S+ K
Sbjct: 111 ALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVK 170
Query: 178 DRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFT 237
VW K+M++ + ++ +N+LI+ C +K L+ +ME + T
Sbjct: 171 SGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVT 230
Query: 238 YNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK 297
YNT++ YCKKG A+ + D M+ +G+ D+ TYN LIH CR R+ + L RD++
Sbjct: 231 YNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMR 290
Query: 298 -------------------------------------GATPNHVTYTTLIDGYCRANDLE 320
G +PNHVT+ LIDG+ + +
Sbjct: 291 KRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFK 350
Query: 321 EALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLI 380
EAL++ +M AKG+ P V+Y +L LCK A M + +T +I
Sbjct: 351 EALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMI 410
Query: 381 NAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFS 440
+ CK G A+ + N M + G+ D TY ALI+GFCK AKE++ + G S
Sbjct: 411 DGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLS 470
Query: 441 PSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRL 500
P+ YS L+ C + +++ + + G D + L+ CK KV A+
Sbjct: 471 PNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEF 530
Query: 501 FNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
M +GIL ++V + L Y +GE + D+M +
Sbjct: 531 MRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTK 571
Score = 168 bits (425), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 140/560 (25%), Positives = 235/560 (41%), Gaps = 72/560 (12%)
Query: 73 NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHV 132
Y ++ ++ T++H K FK+A +L+ + + + N L IHD N
Sbjct: 223 GYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNML--IHDLCRSNRIA 280
Query: 133 LSWLVI--------------------FYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLL 172
+L++ ++N Q+ ++M L P+ V
Sbjct: 281 KGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPN----HVTF 336
Query: 173 NSLAKDRLTDMVWKVYKKMVQL----GVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEF 228
N+L +++ +K KM + G+ + Y VL+ CK+++ D M+
Sbjct: 337 NALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKR 396
Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
V TY +I CK G EA+ + + M ++GI PDIVTY++LI+GFC+ GR +
Sbjct: 397 NGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKT 456
Query: 289 AR----RLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSI 344
A+ R++R G +PN + Y+TLI CR L+EA+R+ E M +G T+N +
Sbjct: 457 AKEIVCRIYR--VGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVL 514
Query: 345 LRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGL 404
+ LCK G++ +A + M I P+ V+ + LIN Y G+ A V + M + G
Sbjct: 515 VTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGH 574
Query: 405 MLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLK 464
FTY +L+ G CK + A++ L + + Y+ L+ C N +
Sbjct: 575 HPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVS 634
Query: 465 LLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG-ILGDSVIYTSLAYAY 523
L E V R + D Y +LI C+K K A + G +L + V+YT
Sbjct: 635 LFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGM 694
Query: 524 WRAGEPKA-----------------------------------CSDILDDMYRRRLMITL 548
++AG+ KA +D+L +M + L
Sbjct: 695 FKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNL 754
Query: 549 KIYRSFSASYAKDNEILDLF 568
Y Y+K ++ F
Sbjct: 755 TTYNILLHGYSKRKDVSTSF 774
Score = 167 bits (423), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 113/421 (26%), Positives = 193/421 (45%), Gaps = 39/421 (9%)
Query: 195 GVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEA 254
GV A++ YN+LIH C+S+ + K LL +M + + + TYNTLI + +G A
Sbjct: 258 GVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIA 317
Query: 255 LAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF--RDIKGATPNHV-------- 304
+ + M G+SP+ VT+N+LI G EG +EA ++F + KG TP+ V
Sbjct: 318 SQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDG 377
Query: 305 ---------------------------TYTTLIDGYCRANDLEEALRLREVMAAKGVYPG 337
TYT +IDG C+ L+EA+ L M+ G+ P
Sbjct: 378 LCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPD 437
Query: 338 VVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKN 397
+VTY++++ CK GR + A ++ + ++P+ + +TLI C++G A+++
Sbjct: 438 IVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYE 497
Query: 398 RMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKN 457
M+ G D FT+ L+ CKA ++ A+E + M G P+ S+ L++GY N
Sbjct: 498 AMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSG 557
Query: 458 NEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYT 517
+ DE G Y +L++ CK + A++ + D+V+Y
Sbjct: 558 EGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYN 617
Query: 518 SLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNE--ILDLFWSHVVDR 575
+L A ++G + +M +R ++ Y S + + + I LF R
Sbjct: 618 TLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEAR 677
Query: 576 G 576
G
Sbjct: 678 G 678
Score = 140 bits (352), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 93/392 (23%), Positives = 172/392 (43%), Gaps = 3/392 (0%)
Query: 156 MRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSD 215
M ++P+ + L+N + V+ +M ++G Y L+ CK
Sbjct: 534 MTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGH 593
Query: 216 VDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNS 275
+ + EK L + D YNTL+ CK G +A+++ M + I PD TY S
Sbjct: 594 LREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTS 653
Query: 276 LIHGFCREGRMREARRLFRDIKG---ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAK 332
LI G CR+G+ A ++ + PN V YT +DG +A + + RE M
Sbjct: 654 LISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNL 713
Query: 333 GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
G P +VT N+++ + G+I N LL EM + P+ T N L++ Y K D +++
Sbjct: 714 GHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTS 773
Query: 393 MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
+ ++ G++ D+ T +L+ G C++ ++I ++L + G +++ L+
Sbjct: 774 FLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISK 833
Query: 453 YCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGD 512
C L+ S G+ +D A++ + + ++ + + M GI +
Sbjct: 834 CCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPE 893
Query: 513 SVIYTSLAYAYWRAGEPKACSDILDDMYRRRL 544
S Y L R G+ K + ++M ++
Sbjct: 894 SRKYIGLINGLCRVGDIKTAFVVKEEMIAHKI 925
Score = 132 bits (333), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 101/355 (28%), Positives = 157/355 (44%), Gaps = 39/355 (10%)
Query: 238 YNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI- 296
Y+ LI +Y ++GM ++L + M G +P + T N+++ + G +++
Sbjct: 126 YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEML 185
Query: 297 -KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIR 355
+ P+ T+ LI+ C E++ L + M G P +VTYN++L CK+GR +
Sbjct: 186 KRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFK 245
Query: 356 DA-----------------------------NR------LLNEMNEKKIAPDNVTCNTLI 380
A NR LL +M ++ I P+ VT NTLI
Sbjct: 246 AAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLI 305
Query: 381 NAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFS 440
N + G A ++ N ML GL + T+ ALI G A ++ + M G +
Sbjct: 306 NGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLT 365
Query: 441 PSYCSYSWLVDGYCNKNNEEALLKLLDEFVSR-GLCVDVSVYRALIRRFCKKEKVDYAQR 499
PS SY L+DG C KN E L + + R G+CV Y +I CK +D A
Sbjct: 366 PSEVSYGVLLDGLC-KNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVV 424
Query: 500 LFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSF 554
L N M +GI D V Y++L + + G K +I+ +YR L IY +
Sbjct: 425 LLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTL 479
Score = 127 bits (318), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 119/531 (22%), Positives = 200/531 (37%), Gaps = 109/531 (20%)
Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
N+ L+ Y N VFD+M P LL L K K
Sbjct: 542 NTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFL 601
Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
K + + + +YN L+ A CKS ++ K L EM + + D +TY +LI+ C+K
Sbjct: 602 KSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRK 661
Query: 249 GMHYEALAV------------------------------------QDRMEREGISPDIVT 272
G A+ +++M+ G +PDIVT
Sbjct: 662 GKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVT 721
Query: 273 YNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGY----------------- 313
N++I G+ R G++ + L ++ + PN TY L+ GY
Sbjct: 722 TNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSII 781
Query: 314 ------------------CRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEG--- 352
C +N LE L++ + +GV T+N ++ K C G
Sbjct: 782 LNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEIN 841
Query: 353 --------------------------------RIRDANRLLNEMNEKKIAPDNVTCNTLI 380
R +++ +L+EM+++ I+P++ LI
Sbjct: 842 WAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLI 901
Query: 381 NAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFS 440
N C++GD +A VK M+ + A++ K + D A LL ML
Sbjct: 902 NGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLV 961
Query: 441 PSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRL 500
P+ S++ L+ C N L+L + GL +D+ Y LI C K + A L
Sbjct: 962 PTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFEL 1021
Query: 501 FNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSD-ILDDMYRRRLMITLKI 550
+ M+G+G L ++ Y +L + +D IL D+ R + ++ +
Sbjct: 1022 YEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLLARGFITSMSL 1072
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 213 bits (542), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 119/384 (30%), Positives = 196/384 (51%), Gaps = 5/384 (1%)
Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
++G + + M H +P + CT L+ + T K+ + + G V ++ YNV+
Sbjct: 119 EEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVM 178
Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
I CK+ +++ +L M V D+ TYNT++ C G +A+ V DRM +
Sbjct: 179 ISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDC 235
Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALR 324
PD++TY LI CR+ + A +L +++ G TP+ VTY L++G C+ L+EA++
Sbjct: 236 YPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIK 295
Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
M + G P V+T+N ILR +C GR DA +LL +M K +P VT N LIN C
Sbjct: 296 FLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLC 355
Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
+ G A+ + +M + G + +Y L+HGFCK K+MD A E L M+ G P
Sbjct: 356 RKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIV 415
Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
+Y+ ++ C E +++L++ S+G + Y +I K K A +L + M
Sbjct: 416 TYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEM 475
Query: 505 QGNGILGDSVIYTSLAYAYWRAGE 528
+ + D++ Y+SL R G+
Sbjct: 476 RAKDLKPDTITYSSLVGGLSREGK 499
Score = 192 bits (487), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 122/410 (29%), Positives = 199/410 (48%), Gaps = 20/410 (4%)
Query: 185 WKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIAL 244
+K + MV G V +I LI C+ K K+L +E D+ TYN +I+
Sbjct: 122 FKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISG 181
Query: 245 YCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA-----RRLFRDIKGA 299
YCK G AL+V DRM +SPD+VTYN+++ C G++++A R L RD
Sbjct: 182 YCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRD---C 235
Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
P+ +TYT LI+ CR + + A++L + M +G P VVTYN ++ +CKEGR+ +A +
Sbjct: 236 YPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIK 295
Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
LN+M P+ +T N ++ + C G A K+ ML G T+ LI+ C
Sbjct: 296 FLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLC 355
Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
+ + A ++L M G P+ SY+ L+ G+C + + ++ L+ VSRG D+
Sbjct: 356 RKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIV 415
Query: 480 VYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
Y ++ CK KV+ A + N + G + Y ++ +AG+ +LD+M
Sbjct: 416 TYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEM 475
Query: 540 YRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKEMQLR 589
+ L Y S +++ + VD + H F+ M +R
Sbjct: 476 RAKDLKPDTITYSSLVGGLSREGK---------VDEAIKFFHEFERMGIR 516
Score = 179 bits (453), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 100/369 (27%), Positives = 184/369 (49%), Gaps = 2/369 (0%)
Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
+ ++V D+M + P + T+L+ + +D K+ +M G ++ YNVL
Sbjct: 221 KQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVL 280
Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
++ CK +D+ K L +M + ++ T+N ++ C G +A + M R+G
Sbjct: 281 VNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGF 340
Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALR 324
SP +VT+N LI+ CR+G + A + + G PN ++Y L+ G+C+ ++ A+
Sbjct: 341 SPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIE 400
Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
E M ++G YP +VTYN++L LCK+G++ DA +LN+++ K +P +T NT+I+
Sbjct: 401 YLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLA 460
Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
K G T A+K+ + M L D TY +L+ G + ++D A + G P+
Sbjct: 461 KAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAV 520
Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
+++ ++ G C + + L ++RG + + Y LI + A L N +
Sbjct: 521 TFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNEL 580
Query: 505 QGNGILGDS 513
G++ S
Sbjct: 581 CNKGLMKKS 589
Score = 160 bits (405), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 178/365 (48%), Gaps = 6/365 (1%)
Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
V +N HL ++ ++ ++++ K L M + D+ TLI +C+ G +A
Sbjct: 103 VESNNHLRQMV-----RTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAA 157
Query: 256 AVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCR 315
+ + +E G PD++TYN +I G+C+ G + A + D +P+ VTY T++ C
Sbjct: 158 KILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVL-DRMSVSPDVVTYNTILRSLCD 216
Query: 316 ANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVT 375
+ L++A+ + + M + YP V+TY ++ C++ + A +LL+EM ++ PD VT
Sbjct: 217 SGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVT 276
Query: 376 CNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGML 435
N L+N CK G A+K N M +G + T+ ++ C A++LL ML
Sbjct: 277 YNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADML 336
Query: 436 DAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVD 495
GFSPS +++ L++ C K + +L++ G + Y L+ FCK++K+D
Sbjct: 337 RKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMD 396
Query: 496 YAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFS 555
A M G D V Y ++ A + G+ + +IL+ + + L Y +
Sbjct: 397 RAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVI 456
Query: 556 ASYAK 560
AK
Sbjct: 457 DGLAK 461
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 212 bits (540), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 125/403 (31%), Positives = 198/403 (49%), Gaps = 3/403 (0%)
Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC 211
+ + M + L+P T ++ ++ D ++ ++MV+ G + NV++H C
Sbjct: 211 MLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFC 270
Query: 212 KSSDVDKVEKLLCEMEFKD-VRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
K V+ + EM +D D +T+NTL+ CK G A+ + D M +EG PD+
Sbjct: 271 KEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDV 330
Query: 271 VTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
TYNS+I G C+ G ++EA + + + +PN VTY TLI C+ N +EEA L V
Sbjct: 331 YTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARV 390
Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGD 388
+ +KG+ P V T+NS+++ LC R A L EM K PD T N LI++ C G
Sbjct: 391 LTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGK 450
Query: 389 TASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSW 448
A+ + +M +G TY LI GFCKA + A+E+ M G S + +Y+
Sbjct: 451 LDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNT 510
Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG 508
L+DG C E +L+D+ + G D Y +L+ FC+ + A + M NG
Sbjct: 511 LIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNG 570
Query: 509 ILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIY 551
D V Y +L +AG + S +L + + + +T Y
Sbjct: 571 CEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAY 613
Score = 202 bits (513), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 132/466 (28%), Positives = 230/466 (49%), Gaps = 13/466 (2%)
Query: 84 MIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPD------GNSHVLSWLV 137
+ ++ +K +F + E+I LR L + + KI +D G S L L+
Sbjct: 69 LFNLASKKPNFSPEPALYEEILLR--LGRSGSFDDMKKILEDMKSSRCEMGTSTFL-ILI 125
Query: 138 IFYANLKMTQDGLQVFDQM-RVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGV 196
YA ++ + L V D M L P H +LN L +V + KM G+
Sbjct: 126 ESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGI 185
Query: 197 VANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALA 256
++ +NVLI A C++ + +L +M + D T+ T++ Y ++G AL
Sbjct: 186 KPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALR 245
Query: 257 VQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK---GATPNHVTYTTLIDGY 313
++++M G S V+ N ++HGFC+EGR+ +A +++ G P+ T+ TL++G
Sbjct: 246 IREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGL 305
Query: 314 CRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDN 373
C+A ++ A+ + +VM +G P V TYNS++ LCK G +++A +L++M + +P+
Sbjct: 306 CKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNT 365
Query: 374 VTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFG 433
VT NTLI+ CK A ++ + G++ D T+ +LI G C + +A EL
Sbjct: 366 VTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEE 425
Query: 434 MLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEK 493
M G P +Y+ L+D C+K + L +L + G V Y LI FCK K
Sbjct: 426 MRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANK 485
Query: 494 VDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
A+ +F+ M+ +G+ +SV Y +L ++ + + ++D M
Sbjct: 486 TREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQM 531
Score = 189 bits (481), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 113/387 (29%), Positives = 186/387 (48%), Gaps = 4/387 (1%)
Query: 147 QDGLQVFDQMRVHN-LMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNV 205
+D L +M + P + L+N L K ++ M+Q G +++ YN
Sbjct: 276 EDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNS 335
Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
+I CK +V + ++L +M +D + TYNTLI+ CK+ EA + + +G
Sbjct: 336 VISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKG 395
Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEAL 323
I PD+ T+NSLI G C R A LF ++ KG P+ TY LID C L+EAL
Sbjct: 396 ILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEAL 455
Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
+ + M G V+TYN+++ CK + R+A + +EM ++ ++VT NTLI+
Sbjct: 456 NMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGL 515
Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY 443
CK A ++ ++M+ G D++TY +L+ FC+ ++ A +++ M G P
Sbjct: 516 CKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDI 575
Query: 444 CSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF-N 502
+Y L+ G C E KLL +G+ + Y +I+ +K K A LF
Sbjct: 576 VTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFRE 635
Query: 503 LMQGNGILGDSVIYTSLAYAYWRAGEP 529
+++ N D+V Y + G P
Sbjct: 636 MLEQNEAPPDAVSYRIVFRGLCNGGGP 662
Score = 172 bits (436), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 110/371 (29%), Positives = 182/371 (49%), Gaps = 10/371 (2%)
Query: 115 VLNALVKIHDDPDGNSH--VLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLL 172
+++ +++ DPD ++ V+S L L ++ ++V DQM + P+ L+
Sbjct: 317 IMDVMLQEGYDPDVYTYNSVISGL----CKLGEVKEAVEVLDQMITRDCSPNTVTYNTLI 372
Query: 173 NSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVR 232
++L K+ + ++ + + G++ ++ +N LI C + + +L EM K
Sbjct: 373 STLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCE 432
Query: 233 ADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRL 292
D FTYN LI C KG EAL + +ME G + ++TYN+LI GFC+ + REA +
Sbjct: 433 PDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEI 492
Query: 293 FRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
F +++ G + N VTY TLIDG C++ +E+A +L + M +G P TYNS+L C+
Sbjct: 493 FDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCR 552
Query: 351 EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
G I+ A ++ M PD VT TLI+ CK G A K+ + G+ L
Sbjct: 553 GGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHA 612
Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSPS-YCSYSWLVDGYCNKNNE-EALLKLLDE 468
Y +I G + ++ A L ML+ +P SY + G CN + L E
Sbjct: 613 YNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVE 672
Query: 469 FVSRGLCVDVS 479
+ +G + S
Sbjct: 673 LLEKGFVPEFS 683
Score = 166 bits (419), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 103/320 (32%), Positives = 152/320 (47%), Gaps = 9/320 (2%)
Query: 265 GISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEA 322
GI PD+ T+N LI CR ++R A + D+ G P+ T+TT++ GY DL+ A
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGA 243
Query: 323 LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM-NEKKIAPDNVTCNTLIN 381
LR+RE M G V+ N I+ CKEGR+ DA + EM N+ PD T NTL+N
Sbjct: 244 LRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVN 303
Query: 382 AYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSP 441
CK G A+++ + ML+ G D +TY ++I G CK E+ A E+L M+ SP
Sbjct: 304 GLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSP 363
Query: 442 SYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
+ +Y+ L+ C +N E +L S+G+ DV + +LI+ C A LF
Sbjct: 364 NTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELF 423
Query: 502 NLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKD 561
M+ G D Y L + G+ ++L M ++ Y + + K
Sbjct: 424 EEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKA 483
Query: 562 N------EILDLFWSHVVDR 575
N EI D H V R
Sbjct: 484 NKTREAEEIFDEMEVHGVSR 503
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 212 bits (539), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 121/362 (33%), Positives = 197/362 (54%), Gaps = 2/362 (0%)
Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
P++ T L++ K + ++ +M +LG+VAN Y VLI+ K+ + ++
Sbjct: 196 PNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEM 255
Query: 223 LCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR 282
+M+ V +L+TYN ++ CK G +A V D M G+S +IVTYN+LI G CR
Sbjct: 256 YEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCR 315
Query: 283 EGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVT 340
E ++ EA ++ +K G PN +TY TLIDG+C L +AL L + ++G+ P +VT
Sbjct: 316 EMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVT 375
Query: 341 YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML 400
YN ++ C++G A +++ EM E+ I P VT LI+ + + + A++++ M
Sbjct: 376 YNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSME 435
Query: 401 EAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEE 460
E GL+ D TY LIHGFC +M+ A L M++ P+ Y+ ++ GYC + +
Sbjct: 436 ELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSY 495
Query: 461 ALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLA 520
LKLL E + L +V+ YR +I CK+ K A+RL M +GI + I + ++
Sbjct: 496 RALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLIS 555
Query: 521 YA 522
A
Sbjct: 556 RA 557
Score = 197 bits (501), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 100/298 (33%), Positives = 176/298 (59%), Gaps = 2/298 (0%)
Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
+ G +++++M+ + P+L+ ++N L KD T ++V+ +M + GV NI YN L
Sbjct: 250 KQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTL 309
Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
I C+ +++ K++ +M+ + +L TYNTLI +C G +AL++ ++ G+
Sbjct: 310 IGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGL 369
Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
SP +VTYN L+ GFCR+G A ++ +++ +G P+ VTYT LID + R++++E+A++
Sbjct: 370 SPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQ 429
Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
LR M G+ P V TY+ ++ C +G++ +A+RL M EK P+ V NT+I YC
Sbjct: 430 LRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYC 489
Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPS 442
K G + A+K+ M E L + +Y+ +I CK ++ A+ L+ M+D+G PS
Sbjct: 490 KEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPS 547
Score = 183 bits (465), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 127/515 (24%), Positives = 242/515 (46%), Gaps = 9/515 (1%)
Query: 44 HKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEK 103
K L+ L N P L AF ++H+ +S ++ +L F AQ++L +
Sbjct: 6 QKTLVLLANLIKFPPLK-AFSLLNSPNFHEFQHTHESISILLRLLLSGNLFSHAQSLLLQ 64
Query: 104 IAL----RDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVH 159
+ F ++ S+L+ L + + + ++ Y + + F++M +
Sbjct: 65 VISGKIHSQFFTSSSLLHYLTE-SETSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDN 123
Query: 160 NLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKV 219
+P + LL + + W + + + VV +++ + +LI CC++ +++K
Sbjct: 124 GFVPGSNCFNYLLTFVVGSSSFNQWWSFFNEN-KSKVVLDVYSFGILIKGCCEAGEIEKS 182
Query: 220 EKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHG 279
LL E+ ++ Y TLI CKKG +A + M + G+ + TY LI+G
Sbjct: 183 FDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLING 242
Query: 280 FCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPG 337
+ G ++ ++ ++ G PN TY +++ C+ ++A ++ + M +GV
Sbjct: 243 LFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCN 302
Query: 338 VVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKN 397
+VTYN+++ LC+E ++ +AN+++++M I P+ +T NTLI+ +C +G A+ +
Sbjct: 303 IVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCR 362
Query: 398 RMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKN 457
+ GL TY L+ GFC+ + A +++ M + G PS +Y+ L+D + +
Sbjct: 363 DLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSD 422
Query: 458 NEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYT 517
N E ++L GL DV Y LI FC K +++ A RLF M + VIY
Sbjct: 423 NMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYN 482
Query: 518 SLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYR 552
++ Y + G +L +M + L + YR
Sbjct: 483 TMILGYCKEGSSYRALKLLKEMEEKELAPNVASYR 517
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 64/133 (48%)
Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
L+ +A + +Q+ M L+P +H +VL++ + +++K MV+
Sbjct: 414 LIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKN 473
Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
N +YN +I CK + KLL EME K++ ++ +Y +I + CK+ EA
Sbjct: 474 CEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAE 533
Query: 256 AVQDRMEREGISP 268
+ ++M GI P
Sbjct: 534 RLVEKMIDSGIDP 546
Score = 50.1 bits (118), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 77/203 (37%), Gaps = 36/203 (17%)
Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSP-SYC------------------------- 444
Y+ +I+ + +++ ++++ M+D GF P S C
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENK 156
Query: 445 --------SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDY 496
S+ L+ G C E LL E G +V +Y LI CKK +++
Sbjct: 157 SKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEK 216
Query: 497 AQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSA 556
A+ LF M G++ + YT L ++ G K ++ + M + L Y
Sbjct: 217 AKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMN 276
Query: 557 SYAKDNEILDLF--WSHVVDRGL 577
KD D F + + +RG+
Sbjct: 277 QLCKDGRTKDAFQVFDEMRERGV 299
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 211 bits (538), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 131/417 (31%), Positives = 204/417 (48%), Gaps = 4/417 (0%)
Query: 127 DGNSHVLSWLVIFYANLKMTQ--DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMV 184
D V+++ + Y K+ + GL++ D+M P A + L+ L K +
Sbjct: 292 DLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEA 351
Query: 185 WKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIAL 244
+ K++V GV N+ +YN LI + CK + E L M +R + TY+ LI +
Sbjct: 352 LNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDM 411
Query: 245 YCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPN 302
+C++G AL+ M G+ + YNSLI+G C+ G + A ++ K P
Sbjct: 412 FCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPT 471
Query: 303 HVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLN 362
VTYT+L+ GYC + +ALRL M KG+ P + T+ ++L L + G IRDA +L N
Sbjct: 472 VVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFN 531
Query: 363 EMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAK 422
EM E + P+ VT N +I YC+ GD + A + M E G++ D ++Y+ LIHG C
Sbjct: 532 EMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTG 591
Query: 423 EMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYR 482
+ AK + G+ + Y+ L+ G+C + E L + E V RG+ +D+ Y
Sbjct: 592 QASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYG 651
Query: 483 ALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
LI K + L M G+ D VIYTS+ A + G+ K I D M
Sbjct: 652 VLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLM 708
Score = 193 bits (491), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 135/555 (24%), Positives = 263/555 (47%), Gaps = 13/555 (2%)
Query: 7 LNSDTKFIKTISAIML-KGHWAKLLNPNIASS-LTSTAIHKVLLNLYNCCHIPSLSCAFF 64
+ D +F+ + I+ K W L+ + S L + + ++L+ + P L FF
Sbjct: 35 IAEDKQFVDAVKRIVRGKRSWEIALSSELVSRRLKTVHVEEILIGTID---DPKLGLRFF 91
Query: 65 KWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS-VLNALVKIH 123
+ + HS S +IH L K F A ++L+ + LR PS V N L +
Sbjct: 92 NFL-GLHRGFDHSTASFCILIHALVKANLFWPASSLLQTLLLR--ALKPSDVFNVLFSCY 148
Query: 124 DDPD-GNSHVLSWLVIFYANLKMTQDGLQVFDQMRVH-NLMPHLHACTVLLNSLAKDRLT 181
+ +S L+ Y + DG+ VF M +L+P + + LL+ L K R
Sbjct: 149 EKCKLSSSSSFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHF 208
Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
+ +++ MV +G+ ++++Y +I + C+ D+ + ++++ ME ++ YN L
Sbjct: 209 GLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVL 268
Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGA-- 299
I CKK +EA+ ++ + + + PD+VTY +L++G C+ + ++
Sbjct: 269 IDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRF 328
Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
+P+ ++L++G + +EEAL L + + GV P + YN+++ LCK + +A
Sbjct: 329 SPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAEL 388
Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
L + M + + P++VT + LI+ +C+ G +A+ M++ GL L + Y +LI+G C
Sbjct: 389 LFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHC 448
Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
K ++ A+ + M++ P+ +Y+ L+ GYC+K L+L E +G+ +
Sbjct: 449 KFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIY 508
Query: 480 VYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
+ L+ + + A +LFN M + + V Y + Y G+ + L +M
Sbjct: 509 TFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEM 568
Query: 540 YRRRLMITLKIYRSF 554
+ ++ YR
Sbjct: 569 TEKGIVPDTYSYRPL 583
Score = 175 bits (443), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 138/615 (22%), Positives = 248/615 (40%), Gaps = 124/615 (20%)
Query: 50 LYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDF 109
+Y C + E + S + +++ L K + A N+++++ DF
Sbjct: 304 VYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVV--DF 361
Query: 110 LSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACT 169
+P N V + L+ + + +FD+M L P+ +
Sbjct: 362 GVSP---------------NLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYS 406
Query: 170 VLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFK 229
+L++ + D +MV G+ +++ YN LI+ CK D+ E + EM K
Sbjct: 407 ILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINK 466
Query: 230 DVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA 289
+ + TY +L+ YC KG +AL + M +GI+P I T+ +L+ G R G +R+A
Sbjct: 467 KLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDA 526
Query: 290 RRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGV--------- 338
+LF ++ PN VTY +I+GYC D+ +A + M KG+ P
Sbjct: 527 VKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHG 586
Query: 339 --------------------------VTYNSILRKLCKEGRIRDA--------------- 357
+ Y +L C+EG++ +A
Sbjct: 587 LCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLD 646
Query: 358 ---------------NR-----LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKN 397
+R LL EM+++ + PD+V ++I+A K GD A + +
Sbjct: 647 LVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWD 706
Query: 398 RMLEAGLMLDQFTYKALIHGFCKAK----------------------------------E 423
M+ G + ++ TY A+I+G CKA E
Sbjct: 707 LMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGE 766
Query: 424 MDIAKEL-LFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYR 482
+D+ K + L + G + +Y+ L+ G+C + E +L+ + G+ D Y
Sbjct: 767 VDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYT 826
Query: 483 ALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRR 542
+I C++ V A L+N M GI D V Y +L + AGE +++ ++M R+
Sbjct: 827 TMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQ 886
Query: 543 RLMITLKIYRSFSAS 557
L+ K R+ +++
Sbjct: 887 GLIPNNKTSRTTTSN 901
>sp|Q9SAA6|PPR34_ARATH Pentatricopeptide repeat-containing protein At1g11710,
mitochondrial OS=Arabidopsis thaliana GN=At1g11710 PE=2
SV=1
Length = 657
Score = 211 bits (537), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 157/565 (27%), Positives = 266/565 (47%), Gaps = 28/565 (4%)
Query: 35 ASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWA--ESAVPNYKHSLQSHWTMIHILTKNK 92
+SSLT+ I +VL + P L+ F+ W + V ++ ++ MIH+L ++
Sbjct: 52 SSSLTNPLISRVLREFRSS---PKLALEFYNWVLRSNTVAKSENRFEASCVMIHLLVGSR 108
Query: 93 HFKSAQNMLEKI--ALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGL 150
F A +++ + + LS VL+ L++ + + V LV Q
Sbjct: 109 RFDDALSIMANLMSVEGEKLSPLHVLSGLIRSYQACGSSPDVFDSLVRACTQNGDAQGAY 168
Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
+V +Q R +HA + L D WKVYK+M LG V N++ +N++I++
Sbjct: 169 EVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRFWKVYKEMDSLGYVENVNTFNLVIYSF 228
Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKG-MHY--EALAVQDRMEREGIS 267
CK S + + + M V ++ ++N +I CK G M + + L M +S
Sbjct: 229 CKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVS 288
Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
P+ VTYNS+I+GFC+ GR+ A R+ D+ G N TY L+D Y RA +EALRL
Sbjct: 289 PNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRL 348
Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
+ M +KG+ V YNSI+ L EG I A +L +MN K + D T ++ C+
Sbjct: 349 CDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCR 408
Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
G A++ + ++ E L+ D + L+H F + K++ A ++L ML G S S
Sbjct: 409 NGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAIS 468
Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
+ L+DGY + E L++ D + ++ +Y +++ K+ A+ + N M+
Sbjct: 469 FGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAME 528
Query: 506 GNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRR-----LMITLKIYRSF---SAS 557
+ D V Y +L + G + DIL M ++ ++T I + S
Sbjct: 529 ----IKDIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGS 584
Query: 558 YAKDNEILDLFWSHVVDRGLMSKHI 582
Y K E+L +V+RG++ I
Sbjct: 585 YEKAKEVLKF----MVERGVVPDSI 605
Score = 129 bits (325), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 164/326 (50%), Gaps = 8/326 (2%)
Query: 171 LLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKD 230
L+++ + +D ++ +M G+V N +YN +++ D++ +L +M K+
Sbjct: 332 LVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKN 391
Query: 231 VRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREAR 290
++ D FT ++ C+ G EA+ Q ++ + + DIV +N+L+H F R+ ++ A
Sbjct: 392 MQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACAD 451
Query: 291 RLFRD--IKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
++ ++G + + +++ TLIDGY + LE AL + + M +V YNSI+ L
Sbjct: 452 QILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGL 511
Query: 349 CKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML--EAGLML 406
K G A ++N M K I VT NTL+N K G+ A + ++M + +
Sbjct: 512 SKRGMAGAAEAVVNAMEIKDI----VTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSV 567
Query: 407 DQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLL 466
T+ +I+ CK + AKE+L M++ G P +Y L+ + ++E +++L
Sbjct: 568 SLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSKHRSQEKVVELH 627
Query: 467 DEFVSRGLCVDVSVYRALIRRFCKKE 492
D + +G+ +Y +++R +E
Sbjct: 628 DYLILQGVTPHEHIYLSIVRPLLDRE 653
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 127/271 (46%), Gaps = 4/271 (1%)
Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
+ + V M N+ +++ L ++ + +++ + +V +I +N L
Sbjct: 378 EGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTL 437
Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
+H + + +++L M + + D ++ TLI Y K+G AL + D M +
Sbjct: 438 MHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNK 497
Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLR 326
+ ++V YNS+++G + G A + ++ + VTY TL++ + ++EEA +
Sbjct: 498 TSNLVIYNSIVNGLSKRGMAGAAEAVVNAME--IKDIVTYNTLLNESLKTGNVEEADDIL 555
Query: 327 EVMAAKGVYPGV--VTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
M + V VT+N ++ LCK G A +L M E+ + PD++T TLI ++
Sbjct: 556 SKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFS 615
Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALI 415
K +++ + ++ G+ + Y +++
Sbjct: 616 KHRSQEKVVELHDYLILQGVTPHEHIYLSIV 646
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 211 bits (536), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 150/535 (28%), Positives = 254/535 (47%), Gaps = 27/535 (5%)
Query: 36 SSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFK 95
SS + +H+ LL C P P++ H S W + + K
Sbjct: 8 SSTGNRFVHRSLLGKGKCGTAP--------------PSFSHC--SFWVRDFSGVRYDYRK 51
Query: 96 SAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVF-- 153
+ N L + L D ++ + +VK P ++ + + A KM + L +
Sbjct: 52 ISINRLNDLKLDDAVN---LFGDMVKSRPFP----SIVEFSKLLSAIAKMNKFDLVISLG 104
Query: 154 DQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKS 213
+QM+ + +L+ ++L+N + + V KM++LG +I N L++ C
Sbjct: 105 EQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHG 164
Query: 214 SDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTY 273
+ + L+ +M + D FT+NTLI + EA+A+ DRM +G PD+VTY
Sbjct: 165 NRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTY 224
Query: 274 NSLIHGFCREGRMREARRLFRDIKGA--TPNHVTYTTLIDGYCRANDLEEALRLREVMAA 331
+++G C+ G + A L + ++ P V Y T+ID C ++ +AL L M
Sbjct: 225 GIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDN 284
Query: 332 KGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTAS 391
KG+ P VVTYNS++R LC GR DA+RLL++M E+KI P+ VT + LI+A+ K G
Sbjct: 285 KGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVE 344
Query: 392 AMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVD 451
A K+ + M++ + D FTY +LI+GFC +D AK + M+ P+ +Y+ L+
Sbjct: 345 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIK 404
Query: 452 GYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILG 511
G+C + ++L E RGL + Y LI F + + D AQ +F M +G+L
Sbjct: 405 GFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLP 464
Query: 512 DSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
D + Y+ L G+ + + + + R ++ + Y K ++ D
Sbjct: 465 DIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVED 519
Score = 203 bits (516), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 120/434 (27%), Positives = 223/434 (51%), Gaps = 4/434 (0%)
Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
S++ +V++ PD S + L+ + + + D+M V P L +++N
Sbjct: 172 SLVGQMVEMGYQPD--SFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVN 229
Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
L K D+ + KKM Q + + +YN +I A C +V+ L EM+ K +R
Sbjct: 230 GLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRP 289
Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
++ TYN+LI C G +A + M I+P++VT+++LI F +EG++ EA +L+
Sbjct: 290 NVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 349
Query: 294 RDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
++ + P+ TY++LI+G+C + L+EA + E+M +K +P VVTYN++++ CK
Sbjct: 350 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKA 409
Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
R+ + L EM+++ + + VT TLI+ + + + +A V +M+ G++ D TY
Sbjct: 410 KRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTY 469
Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
L+ G C +++ A + + + P +Y+ +++G C E L
Sbjct: 470 SILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSL 529
Query: 472 RGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKA 531
+G+ +V Y ++ FC+K + A LF M+ G L DS Y +L A+ R G+ A
Sbjct: 530 KGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAA 589
Query: 532 CSDILDDMYRRRLM 545
++++ +M R +
Sbjct: 590 SAELIREMRSCRFV 603
Score = 196 bits (497), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 125/452 (27%), Positives = 211/452 (46%), Gaps = 4/452 (0%)
Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
+VL ++K+ +PD L+ L+ + + D + + QM P L++
Sbjct: 137 AVLAKMMKLGYEPD--IVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIH 194
Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
L + + +MV G ++ Y ++++ CK D+D LL +ME +
Sbjct: 195 GLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEP 254
Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
+ YNT+I C +AL + M+ +GI P++VTYNSLI C GR +A RL
Sbjct: 255 GVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLL 314
Query: 294 RDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
D+ + PN VT++ LID + + L EA +L + M + + P + TY+S++ C
Sbjct: 315 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 374
Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
R+ +A + M K P+ VT NTLI +CK M++ M + GL+ + TY
Sbjct: 375 DRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTY 434
Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
LIHGF +A+E D A+ + M+ G P +YS L+DG CN E L + +
Sbjct: 435 TTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQR 494
Query: 472 RGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKA 531
+ D+ Y +I CK KV+ LF + G+ + V YT++ + R G +
Sbjct: 495 SKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEE 554
Query: 532 CSDILDDMYRRRLMITLKIYRSFSASYAKDNE 563
+ +M + Y + ++ +D +
Sbjct: 555 ADALFREMKEEGPLPDSGTYNTLIRAHLRDGD 586
Score = 122 bits (307), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 129/267 (48%), Gaps = 4/267 (1%)
Query: 117 NALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLA 176
+ ++K DPD ++ S L+ + + +F+ M + P++ L+
Sbjct: 350 DEMIKRSIDPDIFTY--SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFC 407
Query: 177 KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLF 236
K + D +++++M Q G+V N Y LIH ++ + D + + +M V D+
Sbjct: 408 KAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIM 467
Query: 237 TYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF--R 294
TY+ L+ C G AL V + ++R + PDI TYN +I G C+ G++ + LF
Sbjct: 468 TYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSL 527
Query: 295 DIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRI 354
+KG PN VTYTT++ G+CR EEA L M +G P TYN+++R ++G
Sbjct: 528 SLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDK 587
Query: 355 RDANRLLNEMNEKKIAPDNVTCNTLIN 381
+ L+ EM + D T + N
Sbjct: 588 AASAELIREMRSCRFVGDASTIGLVTN 614
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 207 bits (528), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 115/395 (29%), Positives = 208/395 (52%), Gaps = 2/395 (0%)
Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
+ + + D+M P L V++N L K TD+ + + KM Q + + +YN +
Sbjct: 203 SEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTI 262
Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
I CK +D L EME K +R ++ TY++LI+ C G +A + M I
Sbjct: 263 IDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKI 322
Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
+PD+ T+++LI F +EG++ EA +L+ ++ + P+ VTY++LI+G+C + L+EA +
Sbjct: 323 NPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQ 382
Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
+ E M +K +P VVTYN++++ CK R+ + + EM+++ + + VT N LI
Sbjct: 383 MFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLF 442
Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
+ GD A ++ M+ G+ + TY L+ G CK +++ A + + + P+
Sbjct: 443 QAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIY 502
Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
+Y+ +++G C E L +G+ DV Y +I FC+K + A LF M
Sbjct: 503 TYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEM 562
Query: 505 QGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
+ +G L +S Y +L A R G+ +A ++++ +M
Sbjct: 563 KEDGTLPNSGCYNTLIRARLRDGDREASAELIKEM 597
Score = 195 bits (496), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 133/476 (27%), Positives = 234/476 (49%), Gaps = 11/476 (2%)
Query: 95 KSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFD 154
K ++N L ++ L D ++ + +VK P ++ + + A KM + + +
Sbjct: 51 KLSRNGLSELKLDDAVA---LFGEMVKSRPFPS----IIEFSKLLSAIAKMNKFDVVISL 103
Query: 155 QMRVHNL-MPHLH-ACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCK 212
++ NL +PH H ++L+N + + V KM++LG NI + L++ C
Sbjct: 104 GEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCH 163
Query: 213 SSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVT 272
S + + L+ +M + + T+NTLI EA+A+ DRM +G PD+VT
Sbjct: 164 SKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVT 223
Query: 273 YNSLIHGFCREGRMREARRLFRDIKGA--TPNHVTYTTLIDGYCRANDLEEALRLREVMA 330
Y +++G C+ G A L ++ P + Y T+IDG C+ +++AL L + M
Sbjct: 224 YGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEME 283
Query: 331 AKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTA 390
KG+ P VVTY+S++ LC GR DA+RLL++M E+KI PD T + LI+A+ K G
Sbjct: 284 TKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLV 343
Query: 391 SAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLV 450
A K+ + M++ + TY +LI+GFC +D AK++ M+ P +Y+ L+
Sbjct: 344 EAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLI 403
Query: 451 DGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGIL 510
G+C E +++ E RGL + Y LI+ + D AQ +F M +G+
Sbjct: 404 KGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVP 463
Query: 511 GDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
+ + Y +L + G+ + + + + R ++ T+ Y K ++ D
Sbjct: 464 PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVED 519
Score = 185 bits (469), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 136/502 (27%), Positives = 230/502 (45%), Gaps = 37/502 (7%)
Query: 19 AIMLKGHWAKL-LNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHS 77
A+ + G KL PNI + L+S LLN Y CH +S A + V Y+ +
Sbjct: 135 ALAVLGKMMKLGYEPNIVT-LSS------LLNGY--CHSKRISEAVALVDQMFVTGYQPN 185
Query: 78 LQSHWTMIHILTKNKHFKSAQNMLEKIALR----DFLSTPSVLNALVKIHDDPDGNSHVL 133
+ T+IH L + A +++++ + D ++ V+N L K D
Sbjct: 186 TVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGD--------- 236
Query: 134 SWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQ 193
T + ++M L P + +++ L K + D ++K+M
Sbjct: 237 ------------TDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMET 284
Query: 194 LGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYE 253
G+ N+ Y+ LI C +LL +M + + D+FT++ LI + K+G E
Sbjct: 285 KGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVE 344
Query: 254 ALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLID 311
A + D M + I P IVTY+SLI+GFC R+ EA+++F + K P+ VTY TLI
Sbjct: 345 AEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIK 404
Query: 312 GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAP 371
G+C+ +EE + + M+ +G+ VTYN +++ L + G A + EM + P
Sbjct: 405 GFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPP 464
Query: 372 DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
+ +T NTL++ CK G AM V + + + +TY +I G CKA +++ +L
Sbjct: 465 NIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLF 524
Query: 432 FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
+ G P +Y+ ++ G+C K ++E L E G + Y LIR +
Sbjct: 525 CNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRD 584
Query: 492 EKVDYAQRLFNLMQGNGILGDS 513
+ + L M+ G GD+
Sbjct: 585 GDREASAELIKEMRSCGFAGDA 606
Score = 127 bits (319), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 117/233 (50%), Gaps = 2/233 (0%)
Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
Q+F+ M + P + L+ K + + +V+++M Q G+V N YN+LI
Sbjct: 382 QMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGL 441
Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
++ D D +++ EM V ++ TYNTL+ CK G +A+ V + ++R + P I
Sbjct: 442 FQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTI 501
Query: 271 VTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
TYN +I G C+ G++ + LF ++ KG P+ V Y T+I G+CR EEA L +
Sbjct: 502 YTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKE 561
Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
M G P YN+++R ++G + L+ EM A D T + N
Sbjct: 562 MKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTN 614
Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 163/350 (46%), Gaps = 24/350 (6%)
Query: 83 TMIHILTKNKHFKSAQNM---LEKIALRDFLSTPS-----------------VLNALVKI 122
T+I L K KH A N+ +E +R + T S +L+ +++
Sbjct: 261 TIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIER 320
Query: 123 HDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTD 182
+PD S L+ + + +++D+M ++ P + + L+N D
Sbjct: 321 KINPD--VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLD 378
Query: 183 MVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLI 242
++++ MV ++ YN LI CK V++ ++ EM + + + TYN LI
Sbjct: 379 EAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILI 438
Query: 243 ALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGA--T 300
+ G A + M +G+ P+I+TYN+L+ G C+ G++ +A +F ++ +
Sbjct: 439 QGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 498
Query: 301 PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRL 360
P TY +I+G C+A +E+ L ++ KGV P VV YN+++ C++G +A+ L
Sbjct: 499 PTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADAL 558
Query: 361 LNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
EM E P++ NTLI A + GD ++ ++ M G D T
Sbjct: 559 FKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST 608
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 207 bits (526), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 115/395 (29%), Positives = 208/395 (52%), Gaps = 2/395 (0%)
Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
+ + + D+M P L ++N L K D+ + KKM + + A++ +Y +
Sbjct: 202 SEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTI 261
Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
I A C +V+ L EM+ K +R ++ TYN+LI C G +A + M I
Sbjct: 262 IDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKI 321
Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
+P++VT+++LI F +EG++ EA +L+ ++ + P+ TY++LI+G+C + L+EA
Sbjct: 322 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 381
Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
+ E+M +K +P VVTYN++++ CK R+ + L EM+++ + + VT NTLI
Sbjct: 382 MFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLF 441
Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
+ GD A K+ +M+ G+ D TY L+ G CK +++ A + + + P
Sbjct: 442 QAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIY 501
Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
+Y+ +++G C E L +G+ +V +Y +I FC+K + A LF M
Sbjct: 502 TYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREM 561
Query: 505 QGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
+ +G L +S Y +L A R G+ A ++++ +M
Sbjct: 562 KEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEM 596
Score = 199 bits (505), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 123/416 (29%), Positives = 201/416 (48%), Gaps = 4/416 (0%)
Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
+VL ++K+ +PD LS L+ Y + K + + + DQM V P+ L++
Sbjct: 136 AVLGKMMKLGYEPD--IVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIH 193
Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
L + +MV G ++ Y +++ CK D+D LL +ME + A
Sbjct: 194 GLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEA 253
Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
D+ Y T+I C +AL + M+ +GI P++VTYNSLI C GR +A RL
Sbjct: 254 DVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLL 313
Query: 294 RDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
D+ + PN VT++ LID + + L EA +L + M + + P + TY+S++ C
Sbjct: 314 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 373
Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
R+ +A + M K P+ VT NTLI +CK M++ M + GL+ + TY
Sbjct: 374 DRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTY 433
Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
LI G +A + D+A+++ M+ G P +YS L+DG C E L + +
Sbjct: 434 NTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQK 493
Query: 472 RGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
+ D+ Y +I CK KV+ LF + G+ + +IYT++ + R G
Sbjct: 494 SKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKG 549
Score = 196 bits (497), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 116/366 (31%), Positives = 192/366 (52%), Gaps = 2/366 (0%)
Query: 165 LHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLC 224
L++ +L+N + + V KM++LG +I + L++ C + + L+
Sbjct: 115 LYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVD 174
Query: 225 EMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREG 284
+M + + + T+NTLI EA+A+ DRM G PD+ TY ++++G C+ G
Sbjct: 175 QMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRG 234
Query: 285 RMREARRLFRDIKGA--TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYN 342
+ A L + ++ + V YTT+ID C ++ +AL L M KG+ P VVTYN
Sbjct: 235 DIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYN 294
Query: 343 SILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEA 402
S++R LC GR DA+RLL++M E+KI P+ VT + LI+A+ K G A K+ + M++
Sbjct: 295 SLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 354
Query: 403 GLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEAL 462
+ D FTY +LI+GFC +D AK + M+ P+ +Y+ L+ G+C E
Sbjct: 355 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEG 414
Query: 463 LKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYA 522
++L E RGL + Y LI+ + D AQ++F M +G+ D + Y+ L
Sbjct: 415 MELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDG 474
Query: 523 YWRAGE 528
+ G+
Sbjct: 475 LCKYGK 480
Score = 177 bits (450), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 127/416 (30%), Positives = 202/416 (48%), Gaps = 15/416 (3%)
Query: 173 NSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVR 232
N L +L D V ++ +MVQ + +I +N L+ A K + D V L M+ +
Sbjct: 54 NVLLDLKLDDAV-DLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRIS 112
Query: 233 ADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRL 292
DL++YN LI +C++ ALAV +M + G PDIVT +SL++G+C R+ EA L
Sbjct: 113 YDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVAL 172
Query: 293 FRD--IKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
+ PN VT+ TLI G N EA+ L + M A+G P + TY +++ LCK
Sbjct: 173 VDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCK 232
Query: 351 EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
G I A LL +M + KI D V T+I+A C + A+ + M G+ + T
Sbjct: 233 RGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVT 292
Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFV 470
Y +LI C A LL M++ +P+ ++S L+D + + KL DE +
Sbjct: 293 YNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 352
Query: 471 SRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPK 530
R + D+ Y +LI FC +++D A+ +F LM + V Y +L + +A +
Sbjct: 353 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVE 412
Query: 531 ACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKEM 586
++ +M +R L+ Y + I LF + D M++ IFK+M
Sbjct: 413 EGMELFREMSQRGLVGNTVTYNTL---------IQGLFQAGDCD---MAQKIFKKM 456
Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 114/476 (23%), Positives = 208/476 (43%), Gaps = 59/476 (12%)
Query: 47 LLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIAL 106
LLN Y CH +S A + V Y+ + + T+IH L + A +++++
Sbjct: 156 LLNGY--CHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVA 213
Query: 107 R----DFLSTPSVLNALVKIHD--------------DPDGNSHVLSWLVIFYANLKMTQD 148
R D + +V+N L K D + + + + ++ N K D
Sbjct: 214 RGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVND 273
Query: 149 GLQVFDQMRVHNLMPHLHACTVLLNSLAK-DRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
L +F +M + P++ L+ L R +D ++ M++ + N+ ++ LI
Sbjct: 274 ALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSD-ASRLLSDMIERKINPNVVTFSALI 332
Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
A K + + EKL EM + + D+FTY++LI +C EA + + M +
Sbjct: 333 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 392
Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDIK------------------------------ 297
P++VTYN+LI GFC+ R+ E LFR++
Sbjct: 393 PNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKI 452
Query: 298 -------GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
G P+ +TY+ L+DG C+ LE+AL + E + + P + TYN ++ +CK
Sbjct: 453 FKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCK 512
Query: 351 EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
G++ D L ++ K + P+ + T+I+ +C+ G A + M E G + + T
Sbjct: 513 AGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGT 572
Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLL 466
Y LI + + + EL+ M GF + S +++ + E++ L++L
Sbjct: 573 YNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSYLEML 628
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 142/323 (43%), Gaps = 11/323 (3%)
Query: 244 LYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGATPNH 303
L+ +G+++ A + RE +S +++ L G M ++R L P+
Sbjct: 32 LFSLRGVYFSAASYD---YREKLSRNVLLDLKLDDAVDLFGEMVQSRPL--------PSI 80
Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
V + L+ + N + + L E M + + +YN ++ C+ ++ A +L +
Sbjct: 81 VEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGK 140
Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
M + PD VT ++L+N YC + A+ + ++M + T+ LIHG +
Sbjct: 141 MMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNK 200
Query: 424 MDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRA 483
A L+ M+ G P +Y +V+G C + + + L LL + + DV +Y
Sbjct: 201 ASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTT 260
Query: 484 LIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRR 543
+I C + V+ A LF M GI + V Y SL G S +L DM R+
Sbjct: 261 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK 320
Query: 544 LMITLKIYRSFSASYAKDNEILD 566
+ + + + ++ K+ ++++
Sbjct: 321 INPNVVTFSALIDAFVKEGKLVE 343
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 206 bits (524), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 125/378 (33%), Positives = 198/378 (52%), Gaps = 5/378 (1%)
Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
+ +F M V + L++ +++N L + + V KM++ G ++ + LI+
Sbjct: 89 ISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLING 148
Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
C+ + V L+ +ME R D+ YNT+I CK G+ +A+ + DRMER+G+ D
Sbjct: 149 FCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRAD 208
Query: 270 IVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEALRLRE 327
VTYNSL+ G C GR +A RL RD ++ PN +T+T +ID + + EA++L E
Sbjct: 209 AVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYE 268
Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
M + V P V TYNS++ LC GR+ +A ++L+ M K PD VT NTLIN +CK
Sbjct: 269 EMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSK 328
Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
K+ M + GL+ D TY +I G+ +A D A+E +F +D+ P+ +YS
Sbjct: 329 RVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQE-IFSRMDS--RPNIRTYS 385
Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGN 507
L+ G C E L L + + +D++ Y +I CK V+ A LF +
Sbjct: 386 ILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCK 445
Query: 508 GILGDSVIYTSLAYAYWR 525
G+ D V YT++ + R
Sbjct: 446 GLKPDVVSYTTMISGFCR 463
Score = 179 bits (453), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 106/320 (33%), Positives = 171/320 (53%), Gaps = 2/320 (0%)
Query: 187 VYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYC 246
++ KM+Q + +I ++ ++ KS + D V L ME + DL++YN +I C
Sbjct: 56 LFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLC 115
Query: 247 KKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHV 304
+ AL+V +M + G PD+VT +SLI+GFC+ R+ +A L ++ G P+ V
Sbjct: 116 RCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVV 175
Query: 305 TYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM 364
Y T+IDG C+ + +A+ L + M GV VTYNS++ LC GR DA RL+ +M
Sbjct: 176 IYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDM 235
Query: 365 NEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEM 424
+ I P+ +T +I+ + K G + AMK+ M + D FTY +LI+G C +
Sbjct: 236 VMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRV 295
Query: 425 DIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRAL 484
D AK++L M+ G P +Y+ L++G+C + KL E RGL D Y +
Sbjct: 296 DEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTI 355
Query: 485 IRRFCKKEKVDYAQRLFNLM 504
I+ + + + D AQ +F+ M
Sbjct: 356 IQGYFQAGRPDAAQEIFSRM 375
Score = 160 bits (404), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 95/350 (27%), Positives = 177/350 (50%), Gaps = 7/350 (2%)
Query: 109 FLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHAC 168
F+ SV+ ++K +PD +S L+ + D + + +M P +
Sbjct: 120 FVIALSVVGKMMKFGYEPD--VVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIY 177
Query: 169 TVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEF 228
+++ K L + +++ +M + GV A+ YN L+ C S +L+ +M
Sbjct: 178 NTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVM 237
Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
+D+ ++ T+ +I ++ K+G EA+ + + M R + PD+ TYNSLI+G C GR+ E
Sbjct: 238 RDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDE 297
Query: 289 ARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILR 346
A+++ + KG P+ VTY TLI+G+C++ ++E +L MA +G+ +TYN+I++
Sbjct: 298 AKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQ 357
Query: 347 KLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLML 406
+ GR A + + M+ + P+ T + L+ C A+ + M ++ + L
Sbjct: 358 GYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIEL 414
Query: 407 DQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNK 456
D TY +IHG CK ++ A +L + G P SY+ ++ G+C K
Sbjct: 415 DITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRK 464
Score = 151 bits (381), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 158/323 (48%), Gaps = 2/323 (0%)
Query: 222 LLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFC 281
L C+M + ++ +++ K + +++ ME GI D+ +YN +I+ C
Sbjct: 56 LFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLC 115
Query: 282 REGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVV 339
R R A + + G P+ VT ++LI+G+C+ N + +A+ L M G P VV
Sbjct: 116 RCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVV 175
Query: 340 TYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRM 399
YN+I+ CK G + DA L + M + D VT N+L+ C G + A ++ M
Sbjct: 176 IYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDM 235
Query: 400 LEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNE 459
+ ++ + T+ A+I F K + A +L M P +Y+ L++G C
Sbjct: 236 VMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRV 295
Query: 460 EALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
+ ++LD V++G DV Y LI FCK ++VD +LF M G++GD++ Y ++
Sbjct: 296 DEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTI 355
Query: 520 AYAYWRAGEPKACSDILDDMYRR 542
Y++AG P A +I M R
Sbjct: 356 IQGYFQAGRPDAAQEIFSRMDSR 378
Score = 70.1 bits (170), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/284 (21%), Positives = 114/284 (40%), Gaps = 72/284 (25%)
Query: 61 CAFFKWAESA-----------VPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALR-- 107
C +W+++A VPN + + +I + K F A + E++ R
Sbjct: 220 CCSGRWSDAARLMRDMVMRDIVPN----VITFTAVIDVFVKEGKFSEAMKLYEEMTRRCV 275
Query: 108 --DFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHL 165
D + S++N L +H D + Q+ D M +P +
Sbjct: 276 DPDVFTYNSLINGLC-MHGRVD--------------------EAKQMLDLMVTKGCLPDV 314
Query: 166 HACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVA--------------------------- 198
L+N K + D K++++M Q G+V
Sbjct: 315 VTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSR 374
Query: 199 -----NIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYE 253
NI Y++L++ C + V+K L M+ ++ D+ TYN +I CK G +
Sbjct: 375 MDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVED 434
Query: 254 ALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK 297
A + + +G+ PD+V+Y ++I GFCR+ + ++ L+R ++
Sbjct: 435 AWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQ 478
Score = 67.0 bits (162), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 93/204 (45%)
Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
L +M + + P V + +++ K + + + + M G+ D ++Y +I+ C
Sbjct: 56 LFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLC 115
Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
+ IA ++ M+ G+ P + S L++G+C N + L+ + G DV
Sbjct: 116 RCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVV 175
Query: 480 VYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
+Y +I CK V+ A LF+ M+ +G+ D+V Y SL +G + ++ DM
Sbjct: 176 IYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDM 235
Query: 540 YRRRLMITLKIYRSFSASYAKDNE 563
R ++ + + + + K+ +
Sbjct: 236 VMRDIVPNVITFTAVIDVFVKEGK 259
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 206 bits (524), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 131/443 (29%), Positives = 219/443 (49%), Gaps = 17/443 (3%)
Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
+G ++F +M + L LL L K K+ K+++ GV+ N+ YN+ I
Sbjct: 199 EGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFI 258
Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
C+ ++D +++ + + + D+ TYN LI CK EA +M EG+
Sbjct: 259 QGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLE 318
Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEALRL 325
PD TYN+LI G+C+ G ++ A R+ D G P+ TY +LIDG C + AL L
Sbjct: 319 PDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALAL 378
Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
KG+ P V+ YN++++ L +G I +A +L NEM+EK + P+ T N L+N CK
Sbjct: 379 FNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCK 438
Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
+G + A + M+ G D FT+ LIHG+ +M+ A E+L MLD G P +
Sbjct: 439 MGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYT 498
Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
Y+ L++G C + E +++ V +G ++ + L+ C+ K+D A L M+
Sbjct: 499 YNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMK 558
Query: 506 GNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR--RRLMITLKIYRSFSASYAKDNE 563
+ D+V + +L + + G+ LD Y R++ K+ S+S N
Sbjct: 559 NKSVNPDAVTFGTLIDGFCKNGD-------LDGAYTLFRKMEEAYKV----SSSTPTYNI 607
Query: 564 ILDLFWSHVVDRGLMSKHIFKEM 586
I+ F + M++ +F+EM
Sbjct: 608 IIHAFTEKL--NVTMAEKLFQEM 628
Score = 180 bits (457), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 123/512 (24%), Positives = 235/512 (45%), Gaps = 28/512 (5%)
Query: 73 NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHV 132
+KH+L ++ ++I L F++ + +L + +R+ + +H+
Sbjct: 35 GFKHTLSTYRSVIEKLGYYGKFEAMEEVL--VDMRENVG------------------NHM 74
Query: 133 LSWLVIF----YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
L + + Y Q+ + VF++M ++ P + + +++ L D KVY
Sbjct: 75 LEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVY 134
Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
+M G+ +++ + + + + CK+S +LL M + ++ Y T++ + ++
Sbjct: 135 MRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEE 194
Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTY 306
E + +M G+S + T+N L+ C++G ++E +L + +G PN TY
Sbjct: 195 NFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTY 254
Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
I G C+ +L+ A+R+ + +G P V+TYN+++ LCK + ++A L +M
Sbjct: 255 NLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVN 314
Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
+ + PD+ T NTLI YCK G A ++ + G + DQFTY++LI G C E +
Sbjct: 315 EGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNR 374
Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
A L L G P+ Y+ L+ G N+ +L +E +GL +V + L+
Sbjct: 375 ALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVN 434
Query: 487 RFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMI 546
CK V A L +M G D + L + Y + + +ILD M +
Sbjct: 435 GLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDP 494
Query: 547 TLKIYRSFSASYAKDNEILDLFWSH--VVDRG 576
+ Y S K ++ D+ ++ +V++G
Sbjct: 495 DVYTYNSLLNGLCKTSKFEDVMETYKTMVEKG 526
Score = 168 bits (425), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 114/443 (25%), Positives = 206/443 (46%), Gaps = 20/443 (4%)
Query: 75 KHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLS 134
K + ++ +I+ L KN F+ A+ L K+ +++ + +S+ +
Sbjct: 283 KPDVITYNNLIYGLCKNSKFQEAEVYLGKM-----------------VNEGLEPDSYTYN 325
Query: 135 WLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQL 194
L+ Y M Q ++ + +P L++ L + T+ ++ + +
Sbjct: 326 TLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGK 385
Query: 195 GVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEA 254
G+ N+ LYN LI + + +L EM K + ++ T+N L+ CK G +A
Sbjct: 386 GIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDA 445
Query: 255 LAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDG 312
+ M +G PDI T+N LIHG+ + +M A + + G P+ TY +L++G
Sbjct: 446 DGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNG 505
Query: 313 YCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPD 372
C+ + E+ + + M KG P + T+N +L LC+ ++ +A LL EM K + PD
Sbjct: 506 LCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPD 565
Query: 373 NVTCNTLINAYCKIGDTASAMKVKNRMLEA-GLMLDQFTYKALIHGFCKAKEMDIAKELL 431
VT TLI+ +CK GD A + +M EA + TY +IH F + + +A++L
Sbjct: 566 AVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLF 625
Query: 432 FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
M+D P +Y +VDG+C N K L E + G ++ +I C +
Sbjct: 626 QEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVE 685
Query: 492 EKVDYAQRLFNLMQGNGILGDSV 514
++V A + + M G++ ++V
Sbjct: 686 DRVYEAAGIIHRMVQKGLVPEAV 708
Score = 163 bits (412), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 124/454 (27%), Positives = 196/454 (43%), Gaps = 21/454 (4%)
Query: 78 LQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVK---IHDDPDGNSHVLS 134
L + ++ +L K K + +L+K+ R L N ++ + DG ++
Sbjct: 216 LSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVG 275
Query: 135 WL--------VIFYANL-------KMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDR 179
L VI Y NL Q+ +M L P + L+ K
Sbjct: 276 CLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGG 335
Query: 180 LTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYN 239
+ + ++ V G V + Y LI C + ++ L E K ++ ++ YN
Sbjct: 336 MVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYN 395
Query: 240 TLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--K 297
TLI +GM EA + + M +G+ P++ T+N L++G C+ G + +A L + + K
Sbjct: 396 TLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISK 455
Query: 298 GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDA 357
G P+ T+ LI GY +E AL + +VM GV P V TYNS+L LCK + D
Sbjct: 456 GYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDV 515
Query: 358 NRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHG 417
M EK AP+ T N L+ + C+ A+ + M + D T+ LI G
Sbjct: 516 METYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDG 575
Query: 418 FCKAKEMDIAKELLFGMLDA-GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCV 476
FCK ++D A L M +A S S +Y+ ++ + K N KL E V R L
Sbjct: 576 FCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGP 635
Query: 477 DVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGIL 510
D YR ++ FCK V+ + M NG +
Sbjct: 636 DGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFI 669
Score = 99.8 bits (247), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 136/312 (43%), Gaps = 4/312 (1%)
Query: 253 EALAVQDRMERE-GISPDIVTYNSLIHGFCREGRMREARRLFRDIKGATPNHV---TYTT 308
+AL + + M +E G + TY S+I G+ + D++ NH+ Y
Sbjct: 22 KALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVG 81
Query: 309 LIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKK 368
+ Y R ++EA+ + E M P V +YN+I+ L G A+++ M ++
Sbjct: 82 AMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRG 141
Query: 369 IAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAK 428
I PD + + ++CK +A+++ N M G ++ Y ++ GF +
Sbjct: 142 ITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGY 201
Query: 429 ELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRF 488
EL ML +G S +++ L+ C K + + KLLD+ + RG+ ++ Y I+
Sbjct: 202 ELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGL 261
Query: 489 CKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITL 548
C++ ++D A R+ + G D + Y +L Y + + + L M L
Sbjct: 262 CQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDS 321
Query: 549 KIYRSFSASYAK 560
Y + A Y K
Sbjct: 322 YTYNTLIAGYCK 333
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 205 bits (522), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 120/430 (27%), Positives = 214/430 (49%), Gaps = 5/430 (1%)
Query: 146 TQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNV 205
D + + D+M P+ +LN + K T + ++ +KM + + + Y++
Sbjct: 209 VSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSI 268
Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
+I CK +D L EME K +AD+ TYNTLI +C G + + M +
Sbjct: 269 IIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRK 328
Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEAL 323
ISP++VT++ LI F +EG++REA +L +++ +G PN +TY +LIDG+C+ N LEEA+
Sbjct: 329 ISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAI 388
Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
++ ++M +KG P ++T+N ++ CK RI D L EM+ + + + VT NTL+ +
Sbjct: 389 QMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGF 448
Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY 443
C+ G A K+ M+ + D +YK L+ G C E++ A E+ + +
Sbjct: 449 CQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDI 508
Query: 444 CSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNL 503
Y ++ G CN + + L +G+ +D Y +I C+K+ + A LF
Sbjct: 509 GIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRK 568
Query: 504 MQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL---MITLKIYRSFSASYAK 560
M G D + Y L A+ + ++++++M + T+K+ + +S
Sbjct: 569 MTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSSGEL 628
Query: 561 DNEILDLFWS 570
D LD+ +
Sbjct: 629 DKSFLDMLST 638
Score = 186 bits (473), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 108/399 (27%), Positives = 199/399 (49%), Gaps = 2/399 (0%)
Query: 155 QMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSS 214
QM + ++ ++++N + R + K+++LG + ++N L++ C
Sbjct: 113 QMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLEC 172
Query: 215 DVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYN 274
V + +L+ M + L T NTL+ C G +A+ + DRM G P+ VTY
Sbjct: 173 RVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYG 232
Query: 275 SLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAK 332
+++ C+ G+ A L R + + + V Y+ +IDG C+ L+ A L M K
Sbjct: 233 PVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIK 292
Query: 333 GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
G ++TYN+++ C GR D +LL +M ++KI+P+ VT + LI+++ K G A
Sbjct: 293 GFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREA 352
Query: 393 MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
++ M++ G+ + TY +LI GFCK ++ A +++ M+ G P +++ L++G
Sbjct: 353 DQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILING 412
Query: 453 YCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGD 512
YC N + L+L E RG+ + Y L++ FC+ K++ A++LF M + D
Sbjct: 413 YCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPD 472
Query: 513 SVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIY 551
V Y L GE + +I + + ++ + + IY
Sbjct: 473 IVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIY 511
Score = 182 bits (463), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 106/399 (26%), Positives = 199/399 (49%), Gaps = 2/399 (0%)
Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
D + +F M +P + L +++AK + ++V + K+M G+ +I+ +++I
Sbjct: 71 DAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMI 130
Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
+ C+ + + ++ D +NTL+ C + EAL + DRM G
Sbjct: 131 NCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHK 190
Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
P ++T N+L++G C G++ +A L + G PN VTY +++ C++ A+ L
Sbjct: 191 PTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMEL 250
Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
M + + V Y+ I+ LCK+G + +A L NEM K D +T NTLI +C
Sbjct: 251 LRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCN 310
Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
G K+ M++ + + T+ LI F K ++ A +LL M+ G +P+ +
Sbjct: 311 AGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTIT 370
Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
Y+ L+DG+C +N E ++++D +S+G D+ + LI +CK ++D LF M
Sbjct: 371 YNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMS 430
Query: 506 GNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL 544
G++ ++V Y +L + ++G+ + + +M RR+
Sbjct: 431 LRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRV 469
Score = 176 bits (445), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 106/368 (28%), Positives = 183/368 (49%), Gaps = 2/368 (0%)
Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
P LLN L + ++ +MV++G + N L++ C + V L
Sbjct: 156 PDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVL 215
Query: 223 LCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR 282
+ M + + TY ++ + CK G A+ + +ME I D V Y+ +I G C+
Sbjct: 216 IDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCK 275
Query: 283 EGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVT 340
+G + A LF + IKG + +TY TLI G+C A ++ +L M + + P VVT
Sbjct: 276 DGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVT 335
Query: 341 YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML 400
++ ++ KEG++R+A++LL EM ++ IAP+ +T N+LI+ +CK A+++ + M+
Sbjct: 336 FSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMI 395
Query: 401 EAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEE 460
G D T+ LI+G+CKA +D EL M G + +Y+ LV G+C E
Sbjct: 396 SKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLE 455
Query: 461 ALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLA 520
KL E VSR + D+ Y+ L+ C +++ A +F ++ + + D IY +
Sbjct: 456 VAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIII 515
Query: 521 YAYWRAGE 528
+ A +
Sbjct: 516 HGMCNASK 523
Score = 130 bits (327), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 95/396 (23%), Positives = 179/396 (45%), Gaps = 19/396 (4%)
Query: 73 NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHV 132
N K + +I L K+ +A N+ ++ ++ F + N L+ G +
Sbjct: 258 NIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIG------GFCNA 311
Query: 133 LSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMV 192
W DG ++ M + P++ +VL++S K+ ++ K+M+
Sbjct: 312 GRW-----------DDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMM 360
Query: 193 QLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHY 252
Q G+ N YN LI CK + +++ +++ M K D+ T+N LI YCK
Sbjct: 361 QRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRID 420
Query: 253 EALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLI 310
+ L + M G+ + VTYN+L+ GFC+ G++ A++LF+++ + P+ V+Y L+
Sbjct: 421 DGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILL 480
Query: 311 DGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIA 370
DG C +LE+AL + + + + Y I+ +C ++ DA L + K +
Sbjct: 481 DGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVK 540
Query: 371 PDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL 430
D N +I+ C+ + A + +M E G D+ TY LI + A EL
Sbjct: 541 LDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAEL 600
Query: 431 LFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLL 466
+ M +GF + +++ + +++ L +L
Sbjct: 601 IEEMKSSGFPADVSTVKMVINMLSSGELDKSFLDML 636
Score = 100 bits (248), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 134/299 (44%), Gaps = 4/299 (1%)
Query: 288 EARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSIL 345
+A LFRD+ P + + L + E L L + M +KG+ + T + ++
Sbjct: 71 DAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMI 130
Query: 346 RKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLM 405
C+ ++ A + ++ + PD V NTL+N C + A+++ +RM+E G
Sbjct: 131 NCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHK 190
Query: 406 LDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKL 465
T L++G C ++ A L+ M++ GF P+ +Y +++ C ++L
Sbjct: 191 PTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMEL 250
Query: 466 LDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWR 525
L + R + +D Y +I CK +D A LFN M+ G D + Y +L +
Sbjct: 251 LRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCN 310
Query: 526 AGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI--LDLFWSHVVDRGLMSKHI 582
AG + +L DM +R++ + + S+ K+ ++ D ++ RG+ I
Sbjct: 311 AGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTI 369
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 205 bits (521), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 105/340 (30%), Positives = 186/340 (54%), Gaps = 2/340 (0%)
Query: 190 KMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKG 249
+MV+ G ++ YN +++ C+S D LL +ME ++V+AD+FTY+T+I C+ G
Sbjct: 183 RMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDG 242
Query: 250 MHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYT 307
A+++ ME +GI +VTYNSL+ G C+ G+ + L +D+ + PN +T+
Sbjct: 243 CIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFN 302
Query: 308 TLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEK 367
L+D + + L+EA L + M +G+ P ++TYN+++ C + R+ +AN +L+ M
Sbjct: 303 VLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRN 362
Query: 368 KIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIA 427
K +PD VT +LI YC + MKV + + GL+ + TY L+ GFC++ ++ +A
Sbjct: 363 KCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLA 422
Query: 428 KELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRR 487
+EL M+ G P +Y L+DG C+ E L++ ++ + + + +Y +I
Sbjct: 423 EELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEG 482
Query: 488 FCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
CK KV+ A LF + G+ + + YT + + G
Sbjct: 483 MCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKG 522
Score = 199 bits (506), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 124/428 (28%), Positives = 214/428 (50%), Gaps = 16/428 (3%)
Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
D + +F +M +P L + +++A+ + ++V K++ G+ NI+ N++I
Sbjct: 71 DAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMI 130
Query: 208 HA---CCKS----SDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDR 260
+ CCK+ S + KV KL E D T+NTLI +G EA+ + DR
Sbjct: 131 NCFCRCCKTCFAYSVLGKVMKLGYE-------PDTTTFNTLIKGLFLEGKVSEAVVLVDR 183
Query: 261 MEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRAND 318
M G PD+VTYNS+++G CR G A L R + + + TY+T+ID CR
Sbjct: 184 MVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGC 243
Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT 378
++ A+ L + M KG+ VVTYNS++R LCK G+ D LL +M ++I P+ +T N
Sbjct: 244 IDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNV 303
Query: 379 LINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAG 438
L++ + K G A ++ M+ G+ + TY L+ G+C + A +L M+
Sbjct: 304 LLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNK 363
Query: 439 FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQ 498
SP +++ L+ GYC + +K+ RGL + Y L++ FC+ K+ A+
Sbjct: 364 CSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAE 423
Query: 499 RLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASY 558
LF M +G+L D + Y L G+ + +I +D+ + ++ + + +Y +
Sbjct: 424 ELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGM 483
Query: 559 AKDNEILD 566
K ++ D
Sbjct: 484 CKGGKVED 491
Score = 189 bits (481), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 116/468 (24%), Positives = 230/468 (49%), Gaps = 16/468 (3%)
Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
SVL ++K+ +PD + +F + + + D+M + P + ++N
Sbjct: 144 SVLGKVMKLGYEPDTTTFNTLIKGLFLEG--KVSEAVVLVDRMVENGCQPDVVTYNSIVN 201
Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
+ + T + + +KM + V A++ Y+ +I + C+ +D L EME K +++
Sbjct: 202 GICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKS 261
Query: 234 DLFTYNTLIALYCKKGMHYE-ALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRL 292
+ TYN+L+ CK G + AL ++D + RE I P+++T+N L+ F +EG+++EA L
Sbjct: 262 SVVTYNSLVRGLCKAGKWNDGALLLKDMVSRE-IVPNVITFNVLLDVFVKEGKLQEANEL 320
Query: 293 FRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
++++ +G +PN +TY TL+DGYC N L EA + ++M P +VT+ S+++ C
Sbjct: 321 YKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCM 380
Query: 351 EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
R+ D ++ ++++ + + VT + L+ +C+ G A ++ M+ G++ D T
Sbjct: 381 VKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMT 440
Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFV 470
Y L+ G C +++ A E+ + + Y+ +++G C E L
Sbjct: 441 YGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLP 500
Query: 471 SRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPK 530
+G+ +V Y +I CKK + A L M+ +G + Y +L A+ R G+
Sbjct: 501 CKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLT 560
Query: 531 ACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLM 578
A + ++++M FSA + ++D+ S +D+ +
Sbjct: 561 ASAKLIEEMKS----------CGFSADASSIKMVIDMLLSGELDKSFL 598
Score = 143 bits (361), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 98/396 (24%), Positives = 185/396 (46%), Gaps = 19/396 (4%)
Query: 73 NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHV 132
N K + ++ T+I L ++ +A ++ +++ + S+ N+LV+ G
Sbjct: 223 NVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVR------GLCKA 276
Query: 133 LSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMV 192
W DG + M ++P++ VLL+ K+ ++YK+M+
Sbjct: 277 GKW-----------NDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMI 325
Query: 193 QLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHY 252
G+ NI YN L+ C + + + +L M D+ T+ +LI YC
Sbjct: 326 TRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVD 385
Query: 253 EALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLI 310
+ + V + + G+ + VTY+ L+ GFC+ G+++ A LF+++ G P+ +TY L+
Sbjct: 386 DGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILL 445
Query: 311 DGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIA 370
DG C LE+AL + E + + G+V Y +I+ +CK G++ DA L + K +
Sbjct: 446 DGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVK 505
Query: 371 PDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL 430
P+ +T +I+ CK G + A + +M E G + TY LI + ++ + +L
Sbjct: 506 PNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKL 565
Query: 431 LFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLL 466
+ M GFS S ++D + +++ L +L
Sbjct: 566 IEEMKSCGFSADASSIKMVIDMLLSGELDKSFLDML 601
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 113/260 (43%), Gaps = 2/260 (0%)
Query: 320 EEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTL 379
++A+ L + M P +V ++ + + + ++ IA + T N +
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 380 INAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGF 439
IN +C+ T A V ++++ G D T+ LI G ++ A L+ M++ G
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189
Query: 440 SPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQR 499
P +Y+ +V+G C + L LL + R + DV Y +I C+ +D A
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249
Query: 500 LFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYA 559
LF M+ GI V Y SL +AG+ + +L DM R ++ + + +
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 309
Query: 560 KDNEILDL--FWSHVVDRGL 577
K+ ++ + + ++ RG+
Sbjct: 310 KEGKLQEANELYKEMITRGI 329
>sp|O04504|PPR27_ARATH Pentatricopeptide repeat-containing protein At1g09820
OS=Arabidopsis thaliana GN=At1g09820 PE=2 SV=1
Length = 606
Score = 203 bits (516), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 143/555 (25%), Positives = 265/555 (47%), Gaps = 30/555 (5%)
Query: 14 IKTISAIMLKGHWAKL------LNPN-IASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKW 66
+ I+ ++ K HW+KL +NPN + L S+ + P L ++ W
Sbjct: 43 VAVIADLIEKQHWSKLGVHVTDINPNELFRQLISSELD------------PDLCLRYYSW 90
Query: 67 AESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDP 126
+ SL+ + ++H L K + ++ L+ + + + D+
Sbjct: 91 LVKN-SDISVSLELTFKLLHSLANAKRYSKIRSFLDGFVRNGSDHQVHSIFHAISMCDNV 149
Query: 127 DGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWK 186
NS + LV+ YAN + G + F + + +C L+ +L K+ + V
Sbjct: 150 CVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEY 209
Query: 187 VYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYC 246
VYK+M++ + N+ +NV+I+A CK+ ++K ++ +M+ ++ +YNTLI YC
Sbjct: 210 VYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYC 269
Query: 247 K---KGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATP 301
K G Y+A AV M +SP++ T+N LI GF ++ + + ++F+++ + P
Sbjct: 270 KLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKP 329
Query: 302 NHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLL 361
N ++Y +LI+G C + EA+ +R+ M + GV P ++TYN+++ CK +++A +
Sbjct: 330 NVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMF 389
Query: 362 NEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKA 421
+ + P N LI+AYCK+G +K M G++ D TY LI G C+
Sbjct: 390 GSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRN 449
Query: 422 KEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVY 481
++ AK+ LF L + P ++ L++GYC K LL E GL Y
Sbjct: 450 GNIEAAKK-LFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTY 508
Query: 482 RALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVI-YTSLAYAYWRAGEPKACSDILDDMY 540
+++ +CK+ + A + M+ L +V Y L Y + G+ + + +L++M
Sbjct: 509 NIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEML 568
Query: 541 RRRLM---ITLKIYR 552
+ L+ IT +I +
Sbjct: 569 EKGLVPNRITYEIVK 583
Score = 179 bits (454), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 108/359 (30%), Positives = 186/359 (51%), Gaps = 8/359 (2%)
Query: 152 VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWK---VYKKMVQLGVVANIHLYNVLIH 208
V + M+V+ P++ + L++ K ++K V K+MV+ V N+ +N+LI
Sbjct: 245 VMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILID 304
Query: 209 ACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISP 268
K ++ K+ EM +DV+ ++ +YN+LI C G EA++++D+M G+ P
Sbjct: 305 GFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQP 364
Query: 269 DIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLR 326
+++TYN+LI+GFC+ ++EA +F +K GA P Y LID YC+ +++ L+
Sbjct: 365 NLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALK 424
Query: 327 EVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKI 386
E M +G+ P V TYN ++ LC+ G I A +L +++ K + PD VT + L+ YC+
Sbjct: 425 EEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRK 483
Query: 387 GDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGM-LDAGFSPSYCS 445
G++ A + M + GL TY ++ G+CK + A + M + + S
Sbjct: 484 GESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVAS 543
Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKV-DYAQRLFNL 503
Y+ L+ GY K E LL+E + +GL + Y + + V D LFN+
Sbjct: 544 YNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQGFVPDIEGHLFNV 602
Score = 159 bits (401), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 159/313 (50%), Gaps = 6/313 (1%)
Query: 257 VQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYC 314
V M R I P++ T+N +I+ C+ G+M +AR + D+K G +PN V+Y TLIDGYC
Sbjct: 210 VYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYC 269
Query: 315 RAND---LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAP 371
+ + +A + + M V P + T+N ++ K+ + + ++ EM ++ + P
Sbjct: 270 KLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKP 329
Query: 372 DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
+ ++ N+LIN C G + A+ ++++M+ AG+ + TY ALI+GFCK + A ++
Sbjct: 330 NVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMF 389
Query: 432 FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
+ G P+ Y+ L+D YC + L +E G+ DV Y LI C+
Sbjct: 390 GSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRN 449
Query: 492 EKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIY 551
++ A++LF+ + G L D V + L Y R GE + + +L +M + L Y
Sbjct: 450 GNIEAAKKLFDQLTSKG-LPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTY 508
Query: 552 RSFSASYAKDNEI 564
Y K+ +
Sbjct: 509 NIVMKGYCKEGNL 521
Score = 103 bits (258), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 122/272 (44%), Gaps = 41/272 (15%)
Query: 125 DPDGNSHVLSW--LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTD 182
D D +V+S+ L+ N + + + D+M + P+L L+N K+ +
Sbjct: 324 DQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLK 383
Query: 183 MVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLI 242
++ + G V +YN+LI A CK +D L EME + + D+ TYN LI
Sbjct: 384 EALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLI 443
Query: 243 ALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GAT 300
A C+ G A + D++ +G+ PD+VT++ L+ G+CR+G R+A L +++ G
Sbjct: 444 AGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLK 502
Query: 301 PNHVTYTTLIDGYCRANDLEEALRLREVMA------------------------------ 330
P H+TY ++ GYC+ +L+ A +R M
Sbjct: 503 PRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANM 562
Query: 331 ------AKGVYPGVVTYNSILRKLCKEGRIRD 356
KG+ P +TY + ++ +G + D
Sbjct: 563 LLNEMLEKGLVPNRITYEIVKEEMVDQGFVPD 594
Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 125/300 (41%), Gaps = 6/300 (2%)
Query: 275 SLIHGFCREGRMREARRLFRDIK---GATPNHVTYTTLIDGYCRANDLEEALRLREVMAA 331
S + GF R G + +F I N + L+ Y + E +
Sbjct: 122 SFLDGFVRNGSDHQVHSIFHAISMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGY 181
Query: 332 KGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTAS 391
G ++ ++ L KE R D + EM +KI P+ T N +INA CK G
Sbjct: 182 YGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNK 241
Query: 392 AMKVKNRMLEAGLMLDQFTYKALIHGFCK---AKEMDIAKELLFGMLDAGFSPSYCSYSW 448
A V M G + +Y LI G+CK +M A +L M++ SP+ +++
Sbjct: 242 ARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNI 301
Query: 449 LVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG 508
L+DG+ +N +K+ E + + + +V Y +LI C K+ A + + M G
Sbjct: 302 LIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAG 361
Query: 509 ILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLF 568
+ + + Y +L + + K D+ + + + T ++Y +Y K +I D F
Sbjct: 362 VQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGF 421
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 203 bits (516), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 113/395 (28%), Positives = 209/395 (52%), Gaps = 2/395 (0%)
Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
+ + + DQM P L ++N L K D+ + KKM + + A++ +YN +
Sbjct: 205 SEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTI 264
Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
I CK +D L EM+ K +R D+FTY++LI+ C G +A + M I
Sbjct: 265 IDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKI 324
Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
+P++VT+++LI F +EG++ EA +L+ ++ + P+ TY++LI+G+C + L+EA
Sbjct: 325 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 384
Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
+ E+M +K +P VVTY+++++ CK R+ + L EM+++ + + VT TLI+ +
Sbjct: 385 MFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFF 444
Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
+ D +A V +M+ G+ + TY L+ G CK ++ A + + + P
Sbjct: 445 QARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIY 504
Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
+Y+ +++G C E +L +G+ +V Y +I FC+K + A L M
Sbjct: 505 TYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKM 564
Query: 505 QGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
+ +G L +S Y +L A R G+ +A ++++ +M
Sbjct: 565 KEDGPLPNSGTYNTLIRARLRDGDREASAELIKEM 599
Score = 201 bits (512), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 129/429 (30%), Positives = 212/429 (49%), Gaps = 6/429 (1%)
Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
+VL ++K+ +PD LS L+ Y + K D + + DQM P T L++
Sbjct: 139 AVLAKMMKLGYEPD--IVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIH 196
Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
L + +MVQ G ++ Y +++ CK D+D LL +ME + A
Sbjct: 197 GLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEA 256
Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
D+ YNT+I CK +AL + M+ +GI PD+ TY+SLI C GR +A RL
Sbjct: 257 DVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLL 316
Query: 294 RDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
D+ + PN VT++ LID + + L EA +L + M + + P + TY+S++ C
Sbjct: 317 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 376
Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
R+ +A + M K P+ VT +TLI +CK M++ M + GL+ + TY
Sbjct: 377 DRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTY 436
Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
LIHGF +A++ D A+ + M+ G P+ +Y+ L+DG C KN + A ++ E++
Sbjct: 437 TTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLC-KNGKLAKAMVVFEYLQ 495
Query: 472 RG-LCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPK 530
R + D+ Y +I CK KV+ LF + G+ + + Y ++ + R G +
Sbjct: 496 RSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKE 555
Query: 531 ACSDILDDM 539
+L M
Sbjct: 556 EADSLLKKM 564
Score = 193 bits (491), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 117/377 (31%), Positives = 193/377 (51%), Gaps = 2/377 (0%)
Query: 154 DQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKS 213
+QM+ + L+ ++ +N + + V KM++LG +I + L++ C S
Sbjct: 107 EQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHS 166
Query: 214 SDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTY 273
+ L+ +M + D FT+ TLI EA+A+ D+M + G PD+VTY
Sbjct: 167 KRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTY 226
Query: 274 NSLIHGFCREGRMREARRLFRDIKGA--TPNHVTYTTLIDGYCRANDLEEALRLREVMAA 331
++++G C+ G + A L + ++ + V Y T+IDG C+ +++AL L M
Sbjct: 227 GTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDN 286
Query: 332 KGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTAS 391
KG+ P V TY+S++ LC GR DA+RLL++M E+KI P+ VT + LI+A+ K G
Sbjct: 287 KGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVE 346
Query: 392 AMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVD 451
A K+ + M++ + D FTY +LI+GFC +D AK + M+ P+ +YS L+
Sbjct: 347 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIK 406
Query: 452 GYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILG 511
G+C E ++L E RGL + Y LI F + D AQ +F M G+
Sbjct: 407 GFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHP 466
Query: 512 DSVIYTSLAYAYWRAGE 528
+ + Y L + G+
Sbjct: 467 NILTYNILLDGLCKNGK 483
Score = 186 bits (471), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 110/381 (28%), Positives = 198/381 (51%), Gaps = 2/381 (0%)
Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
D + +F M P + LL+++AK ++V + ++M LG+ +++ Y++ I
Sbjct: 66 DAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFI 125
Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
+ C+ S + +L +M D+ T ++L+ YC +A+A+ D+M G
Sbjct: 126 NCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYK 185
Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
PD T+ +LIHG + EA L + +G P+ VTY T+++G C+ D++ AL L
Sbjct: 186 PDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSL 245
Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
+ M + VV YN+I+ LCK + DA L EM+ K I PD T ++LI+ C
Sbjct: 246 LKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCN 305
Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
G + A ++ + M+E + + T+ ALI F K ++ A++L M+ P +
Sbjct: 306 YGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 365
Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
YS L++G+C + + + + +S+ +V Y LI+ FCK ++V+ LF M
Sbjct: 366 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMS 425
Query: 506 GNGILGDSVIYTSLAYAYWRA 526
G++G++V YT+L + +++A
Sbjct: 426 QRGLVGNTVTYTTLIHGFFQA 446
Score = 181 bits (458), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 119/410 (29%), Positives = 203/410 (49%), Gaps = 9/410 (2%)
Query: 177 KDRLTDMV-----WKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDV 231
++RL+D++ ++ MV+ +I +N L+ A K + + V L +M+ +
Sbjct: 55 RNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGI 114
Query: 232 RADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARR 291
DL+TY+ I +C++ ALAV +M + G PDIVT +SL++G+C R+ +A
Sbjct: 115 SHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVA 174
Query: 292 LFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLC 349
L + G P+ T+TTLI G N EA+ L + M +G P +VTY +++ LC
Sbjct: 175 LVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLC 234
Query: 350 KEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQF 409
K G I A LL +M + KI D V NT+I+ CK A+ + M G+ D F
Sbjct: 235 KRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVF 294
Query: 410 TYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEF 469
TY +LI C A LL M++ +P+ ++S L+D + + KL DE
Sbjct: 295 TYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 354
Query: 470 VSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEP 529
+ R + D+ Y +LI FC +++D A+ +F LM + V Y++L + +A
Sbjct: 355 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRV 414
Query: 530 KACSDILDDMYRRRLMITLKIYRSFSASY--AKDNEILDLFWSHVVDRGL 577
+ ++ +M +R L+ Y + + A+D + + + +V G+
Sbjct: 415 EEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGV 464
Score = 128 bits (321), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 132/267 (49%), Gaps = 4/267 (1%)
Query: 117 NALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLA 176
+ ++K DPD ++ S L+ + + +F+ M + P++ + L+
Sbjct: 352 DEMIKRSIDPDIFTY--SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFC 409
Query: 177 KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLF 236
K + + +++++M Q G+V N Y LIH ++ D D + + +M V ++
Sbjct: 410 KAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNIL 469
Query: 237 TYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI 296
TYN L+ CK G +A+ V + ++R + PDI TYN +I G C+ G++ + LF ++
Sbjct: 470 TYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNL 529
Query: 297 --KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRI 354
KG +PN + Y T+I G+CR EEA L + M G P TYN+++R ++G
Sbjct: 530 SLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDR 589
Query: 355 RDANRLLNEMNEKKIAPDNVTCNTLIN 381
+ L+ EM A D T + N
Sbjct: 590 EASAELIKEMRSCGFAGDASTIGLVTN 616
Score = 125 bits (315), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 169/348 (48%), Gaps = 20/348 (5%)
Query: 83 TMIHILTKNKHFKSAQNMLEKI---ALR-DFLSTPSVLNALVKIHDDPDG---------- 128
T+I L K KH A N+ ++ +R D + S+++ L D
Sbjct: 263 TIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIER 322
Query: 129 --NSHVLSWLVIFYANLKMTQ--DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMV 184
N +V+++ + A +K + + +++D+M ++ P + + L+N D
Sbjct: 323 KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 382
Query: 185 WKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIAL 244
+++ M+ N+ Y+ LI CK+ V++ +L EM + + + TY TLI
Sbjct: 383 KHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHG 442
Query: 245 YCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGAT--PN 302
+ + A V +M G+ P+I+TYN L+ G C+ G++ +A +F ++ +T P+
Sbjct: 443 FFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPD 502
Query: 303 HVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLN 362
TY +I+G C+A +E+ L ++ KGV P V+ YN+++ C++G +A+ LL
Sbjct: 503 IYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLK 562
Query: 363 EMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
+M E P++ T NTLI A + GD ++ ++ M G D T
Sbjct: 563 KMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST 610
Score = 73.6 bits (179), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 94/214 (43%), Gaps = 1/214 (0%)
Query: 341 YNSILR-KLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRM 399
Y ILR +L ++ DA L +M + + P V N L++A K+ + + +M
Sbjct: 50 YREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQM 109
Query: 400 LEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNE 459
G+ D +TY I+ FC+ ++ +A +L M+ G+ P + S L++GYC+
Sbjct: 110 QTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRI 169
Query: 460 EALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
+ L+D+ V G D + LI K A L + M G D V Y ++
Sbjct: 170 SDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTV 229
Query: 520 AYAYWRAGEPKACSDILDDMYRRRLMITLKIYRS 553
+ G+ +L M + ++ + IY +
Sbjct: 230 VNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNT 263
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 202 bits (515), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 123/417 (29%), Positives = 212/417 (50%), Gaps = 6/417 (1%)
Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
SVL K+ +PD + S LV + + + + D+M P L + L+N
Sbjct: 126 SVLGRAWKLGYEPD--TITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLIN 183
Query: 174 SLA-KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVR 232
L K R+++ + + +MV+ G + Y +++ CKS + L +ME ++++
Sbjct: 184 GLCLKGRVSEALVLI-DRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIK 242
Query: 233 ADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRL 292
A + Y+ +I CK G +AL++ + ME +GI D+VTY+SLI G C +G+ + ++
Sbjct: 243 ASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKM 302
Query: 293 FRDIKGAT--PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
R++ G P+ VT++ LID + + L EA L M +G+ P +TYNS++ CK
Sbjct: 303 LREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCK 362
Query: 351 EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
E + +AN++ + M K PD VT + LIN+YCK M++ + GL+ + T
Sbjct: 363 ENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTIT 422
Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFV 470
Y L+ GFC++ +++ AKEL M+ G PS +Y L+DG C+ L++ ++
Sbjct: 423 YNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQ 482
Query: 471 SRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
+ + + +Y +I C KVD A LF + G+ D V Y + + G
Sbjct: 483 KSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKG 539
Score = 202 bits (513), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 113/396 (28%), Positives = 202/396 (51%), Gaps = 2/396 (0%)
Query: 146 TQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNV 205
+ L + D+M + P +LN L K + + +++KM + + A++ Y++
Sbjct: 191 VSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSI 250
Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
+I + CK D L EME K ++AD+ TY++LI C G + + M
Sbjct: 251 VIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRN 310
Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEAL 323
I PD+VT+++LI F +EG++ EA+ L+ ++ +G P+ +TY +LIDG+C+ N L EA
Sbjct: 311 IIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEAN 370
Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
++ ++M +KG P +VTY+ ++ CK R+ D RL E++ K + P+ +T NTL+ +
Sbjct: 371 QMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGF 430
Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY 443
C+ G +A ++ M+ G+ TY L+ G C E++ A E+ M + +
Sbjct: 431 CQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGI 490
Query: 444 CSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNL 503
Y+ ++ G CN + + L +G+ DV Y +I CKK + A LF
Sbjct: 491 GIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRK 550
Query: 504 MQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
M+ +G D Y L A+ + +++++M
Sbjct: 551 MKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEM 586
Score = 193 bits (490), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 118/398 (29%), Positives = 193/398 (48%), Gaps = 2/398 (0%)
Query: 156 MRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSD 215
M ++ + ++ T+++N + + + V + +LG + ++ L++ C
Sbjct: 96 MELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGR 155
Query: 216 VDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNS 275
V + L+ M R DL T +TLI C KG EAL + DRM G PD VTY
Sbjct: 156 VSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGP 215
Query: 276 LIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKG 333
+++ C+ G A LFR + + + V Y+ +ID C+ ++AL L M KG
Sbjct: 216 VLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKG 275
Query: 334 VYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAM 393
+ VVTY+S++ LC +G+ D ++L EM + I PD VT + LI+ + K G A
Sbjct: 276 IKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAK 335
Query: 394 KVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGY 453
++ N M+ G+ D TY +LI GFCK + A ++ M+ G P +YS L++ Y
Sbjct: 336 ELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSY 395
Query: 454 CNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDS 513
C + ++L E S+GL + Y L+ FC+ K++ A+ LF M G+
Sbjct: 396 CKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSV 455
Query: 514 VIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIY 551
V Y L GE +I + M + R+ + + IY
Sbjct: 456 VTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIY 493
Score = 192 bits (488), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 109/366 (29%), Positives = 188/366 (51%), Gaps = 2/366 (0%)
Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
L +F +M N+ + +++++SL KD D ++ +M G+ A++ Y+ LI
Sbjct: 230 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 289
Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
C D K+L EM +++ D+ T++ LI ++ K+G EA + + M GI+PD
Sbjct: 290 LCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPD 349
Query: 270 IVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLRE 327
+TYNSLI GFC+E + EA ++F + KG P+ VTY+ LI+ YC+A +++ +RL
Sbjct: 350 TITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFR 409
Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
+++KG+ P +TYN+++ C+ G++ A L EM + + P VT L++ C G
Sbjct: 410 EISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNG 469
Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
+ A+++ +M ++ + L Y +IHG C A ++D A L + D G P +Y+
Sbjct: 470 ELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYN 529
Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGN 507
++ G C K + L + G D Y LIR + + L M+
Sbjct: 530 VMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVC 589
Query: 508 GILGDS 513
G DS
Sbjct: 590 GFSADS 595
Score = 178 bits (452), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 125/456 (27%), Positives = 206/456 (45%), Gaps = 54/456 (11%)
Query: 171 LLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKD 230
L N + ++ D + +++ M+Q + +N L A ++ D V ME
Sbjct: 42 LRNGIVDIKVNDAI-DLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNG 100
Query: 231 VRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREAR 290
+ D++T +I YC+K A +V R + G PD +T+++L++GFC EGR+ EA
Sbjct: 101 IEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAV 160
Query: 291 RLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRK- 347
L + P+ VT +TLI+G C + EAL L + M G P VTY +L +
Sbjct: 161 ALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRL 220
Query: 348 ----------------------------------LCKEGRIRDANRLLNEMNEKKIAPDN 373
LCK+G DA L NEM K I D
Sbjct: 221 CKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADV 280
Query: 374 VTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFG 433
VT ++LI C G K+ M+ ++ D T+ ALI F K ++ AKEL
Sbjct: 281 VTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNE 340
Query: 434 MLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEK 493
M+ G +P +Y+ L+DG+C +N ++ D VS+G D+ Y LI +CK ++
Sbjct: 341 MITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKR 400
Query: 494 VDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRS 553
VD RLF + G++ +++ Y +L + ++G+ A ++ +M R + ++ Y
Sbjct: 401 VDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTY-- 458
Query: 554 FSASYAKDNEILDLFWSHVVDRGLMSK--HIFKEMQ 587
+ + D G ++K IF++MQ
Sbjct: 459 ------------GILLDGLCDNGELNKALEIFEKMQ 482
Score = 159 bits (403), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 96/340 (28%), Positives = 170/340 (50%), Gaps = 2/340 (0%)
Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
D L +F++M + + + + L+ L D D K+ ++M+ ++ ++ ++ LI
Sbjct: 263 DALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALI 322
Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
K + + ++L EM + + D TYN+LI +CK+ +EA + D M +G
Sbjct: 323 DVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCE 382
Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
PDIVTY+ LI+ +C+ R+ + RLFR+I KG PN +TY TL+ G+C++ L A L
Sbjct: 383 PDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKEL 442
Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
+ M ++GV P VVTY +L LC G + A + +M + ++ N +I+ C
Sbjct: 443 FQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCN 502
Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
A + + + G+ D TY +I G CK + A L M + G +P +
Sbjct: 503 ASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFT 562
Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
Y+ L+ + + + ++L++E G D S + +I
Sbjct: 563 YNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVI 602
Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 104/400 (26%), Positives = 190/400 (47%), Gaps = 27/400 (6%)
Query: 73 NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALR----DFLSTPSVLNALVKIHDDPDG 128
N K S+ + +I L K+ F A ++ ++ ++ D ++ S++ L DG
Sbjct: 240 NIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCN-----DG 294
Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
W DG ++ +M N++P + + L++ K+ ++Y
Sbjct: 295 K-----W-----------DDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELY 338
Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
+M+ G+ + YN LI CK + + + ++ M K D+ TY+ LI YCK
Sbjct: 339 NEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKA 398
Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTY 306
+ + + + +G+ P+ +TYN+L+ GFC+ G++ A+ LF+++ +G P+ VTY
Sbjct: 399 KRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTY 458
Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
L+DG C +L +AL + E M + G+ YN I+ +C ++ DA L +++
Sbjct: 459 GILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSD 518
Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
K + PD VT N +I CK G + A + +M E G D FTY LI +
Sbjct: 519 KGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLIS 578
Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLL 466
+ EL+ M GFS + ++D ++ +++ L +L
Sbjct: 579 SVELIEEMKVCGFSADSSTIKMVIDMLSDRRLDKSFLDML 618
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 202 bits (515), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 165/568 (29%), Positives = 258/568 (45%), Gaps = 71/568 (12%)
Query: 19 AIMLKGHWAKLLNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSL 78
+I+ K +W K +P++ S +++ + V +L++ P + F W S P YKHS+
Sbjct: 68 SILSKPNWHK--SPSLKSMVSAISPSHVS-SLFSLDLDPKTALNFSHWI-SQNPRYKHSV 123
Query: 79 QSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVI 138
S+ +++ +L N + ++ KI L S SV +AL +VL
Sbjct: 124 YSYASLLTLLINNGYV----GVVFKIRLLMIKSCDSVGDAL-----------YVLDLC-- 166
Query: 139 FYANLKMTQDGLQVFDQMRVHNLMPHLHAC-TVLLNSLAKDRLTDMVWKVYKKMVQLGVV 197
KM +D R + C LLNSLA+ L D + +VY +M++ V
Sbjct: 167 ----RKMNKDE-------RFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVC 215
Query: 198 ANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAV 257
NI+ YN +++ CK +V++ + + ++ + D FTY +LI YC++ A V
Sbjct: 216 PNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKV 275
Query: 258 QDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK-------------------- 297
+ M +G + V Y LIHG C R+ EA LF +K
Sbjct: 276 FNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCG 335
Query: 298 -----------------GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVT 340
G PN TYT LID C E+A L M KG+ P V+T
Sbjct: 336 SERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVIT 395
Query: 341 YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML 400
YN+++ CK G I DA ++ M +K++P+ T N LI YCK + AM V N+ML
Sbjct: 396 YNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKML 454
Query: 401 EAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEE 460
E ++ D TY +LI G C++ D A LL M D G P +Y+ ++D C E
Sbjct: 455 ERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVE 514
Query: 461 ALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLA 520
L D +G+ +V +Y ALI +CK KVD A + M L +S+ + +L
Sbjct: 515 EACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALI 574
Query: 521 YAYWRAGEPKACSDILDDMYRRRLMITL 548
+ G+ K + + + M + L T+
Sbjct: 575 HGLCADGKLKEATLLEEKMVKIGLQPTV 602
Score = 201 bits (511), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 117/393 (29%), Positives = 194/393 (49%), Gaps = 1/393 (0%)
Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
+ + +F +M+ P + TVL+ SL + K+M + G+ NIH Y VLI
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
+ C +K +LL +M K + ++ TYN LI YCK+GM +A+ V + ME +S
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425
Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI-KGATPNHVTYTTLIDGYCRANDLEEALRLR 326
P+ TYN LI G+C+ + L + + + P+ VTY +LIDG CR+ + + A RL
Sbjct: 426 PNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLL 485
Query: 327 EVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKI 386
+M +G+ P TY S++ LCK R+ +A L + + +K + P+ V LI+ YCK
Sbjct: 486 SLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKA 545
Query: 387 GDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSY 446
G A + +ML + + T+ ALIHG C ++ A L M+ G P+ +
Sbjct: 546 GKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTD 605
Query: 447 SWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQG 506
+ L+ + + + +S G D Y I+ +C++ ++ A+ + M+
Sbjct: 606 TILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRE 665
Query: 507 NGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
NG+ D Y+SL Y G+ D+L M
Sbjct: 666 NGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRM 698
Score = 186 bits (472), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 113/395 (28%), Positives = 196/395 (49%), Gaps = 10/395 (2%)
Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
+ L + +M + P++H TVL++SL + ++ +M++ G++ N+ YN LI
Sbjct: 341 EALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALI 400
Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
+ CK ++ ++ ME + + + TYN LI YCK +H +A+ V ++M +
Sbjct: 401 NGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVH-KAMGVLNKMLERKVL 459
Query: 268 PDIVTYNSLIHGFCREGRMREARRLFR--DIKGATPNHVTYTTLIDGYCRANDLEEALRL 325
PD+VTYNSLI G CR G A RL + +G P+ TYT++ID C++ +EEA L
Sbjct: 460 PDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDL 519
Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
+ + KGV P VV Y +++ CK G++ +A+ +L +M K P+++T N LI+ C
Sbjct: 520 FDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCA 579
Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
G A ++ +M++ GL T LIH K + D A ML +G P +
Sbjct: 580 DGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHT 639
Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
Y+ + YC + ++ + G+ D+ Y +LI+ + + ++A + M+
Sbjct: 640 YTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMR 699
Query: 506 GNGILGDSVIYTSL-------AYAYWRAGEPKACS 533
G + SL Y + EP+ C+
Sbjct: 700 DTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCA 734
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 121/431 (28%), Positives = 203/431 (47%), Gaps = 50/431 (11%)
Query: 194 LGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADL------FTYNTLIALYCK 247
+GVV I L ++I +C D V L C KD R +L YNTL+ +
Sbjct: 139 VGVVFKIRL--LMIKSCDSVGDALYVLDL-CRKMNKDERFELKYKLIIGCYNTLLNSLAR 195
Query: 248 KGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVT 305
G+ E V M + + P+I TYN +++G+C+ G + EA + I G P+ T
Sbjct: 196 FGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFT 255
Query: 306 YTTLIDGYCRANDLEEALRLREVMAAKG-------------------------------- 333
YT+LI GYC+ DL+ A ++ M KG
Sbjct: 256 YTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMK 315
Query: 334 ---VYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTA 390
+P V TY +++ LC R +A L+ EM E I P+ T LI++ C
Sbjct: 316 DDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFE 375
Query: 391 SAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLV 450
A ++ +MLE GLM + TY ALI+G+CK ++ A +++ M SP+ +Y+ L+
Sbjct: 376 KARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELI 435
Query: 451 DGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGIL 510
GYC N +A + +L++ + R + DV Y +LI C+ D A RL +LM G++
Sbjct: 436 KGYCKSNVHKA-MGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLV 494
Query: 511 GDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWS 570
D YTS+ + ++ + D+ D + ++ + + +Y + Y K ++ + +
Sbjct: 495 PDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDE---A 551
Query: 571 HVVDRGLMSKH 581
H++ ++SK+
Sbjct: 552 HLMLEKMLSKN 562
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 105/432 (24%), Positives = 176/432 (40%), Gaps = 61/432 (14%)
Query: 156 MRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSD 215
M L+P T +++SL K + + ++ + Q GV N+ +Y LI CK+
Sbjct: 488 MNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGK 547
Query: 216 VDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNS 275
VD+ +L +M K+ + T+N LI C G EA ++++M + G+ P + T
Sbjct: 548 VDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTI 607
Query: 276 LIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKG 333
LIH ++G A F+ + G P+ TYTT I YCR L +A + M G
Sbjct: 608 LIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENG 667
Query: 334 VYPGVVTYNSILRKLCKEG----------RIRDAN------------------------- 358
V P + TY+S+++ G R+RD
Sbjct: 668 VSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKG 727
Query: 359 ------------------RLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML 400
LL +M E + P+ + LI C++G+ A KV + M
Sbjct: 728 SEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQ 787
Query: 401 E-AGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNE 459
G+ + + AL+ CK K+ + A +++ M+ G P S L+ G K +
Sbjct: 788 RNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEK 847
Query: 460 EALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
E + + G D ++ +I K+ V+ LFN+M+ NG ++S
Sbjct: 848 ERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNG-----CKFSSQ 902
Query: 520 AYAYWRAGEPKA 531
Y+ G P +
Sbjct: 903 TYSLLIEGPPDS 914
Score = 112 bits (281), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 99/438 (22%), Positives = 178/438 (40%), Gaps = 41/438 (9%)
Query: 73 NYKHSLQSHWT---MIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGN 129
N + + WT MI L K+K + A ++ + + + + AL+ DG
Sbjct: 489 NDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALI------DG- 541
Query: 130 SHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYK 189
Y + + ++M N +P+ L++ L D + +
Sbjct: 542 ----------YCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEE 591
Query: 190 KMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKG 249
KMV++G+ + +LIH K D D +M + D TY T I YC++G
Sbjct: 592 KMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREG 651
Query: 250 MHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYT 307
+A + +M G+SPD+ TY+SLI G+ G+ A + + ++ G P+ T+
Sbjct: 652 RLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFL 711
Query: 308 TLI---------------DGYCRANDLEE---ALRLREVMAAKGVYPGVVTYNSILRKLC 349
+LI C +++ E + L E M V P +Y ++ +C
Sbjct: 712 SLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGIC 771
Query: 350 KEGRIRDANRLLNEMNEKK-IAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ 408
+ G +R A ++ + M + I+P + N L++ CK+ A KV + M+ G +
Sbjct: 772 EVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQL 831
Query: 409 FTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
+ K LI G K E + + +L G+ ++ ++DG + EA +L +
Sbjct: 832 ESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNV 891
Query: 469 FVSRGLCVDVSVYRALIR 486
G Y LI
Sbjct: 892 MEKNGCKFSSQTYSLLIE 909
Score = 100 bits (248), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 99/378 (26%), Positives = 155/378 (41%), Gaps = 40/378 (10%)
Query: 97 AQNMLEKIALRDFLSTPSVLNALVKIHD-DPDGNSHVLSWLVIFYANLKMTQDGLQVFDQ 155
A MLEK+ ++ L NAL IH DG + L KM + GLQ
Sbjct: 551 AHLMLEKMLSKNCLPNSLTFNAL--IHGLCADGKLKEATLL-----EEKMVKIGLQ---- 599
Query: 156 MRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSD 215
P + T+L++ L KD D + +++M+ G + H Y I C+
Sbjct: 600 -------PTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGR 652
Query: 216 VDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNS 275
+ E ++ +M V DLFTY++LI Y G A V RM G P T+ S
Sbjct: 653 LLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLS 712
Query: 276 LIH---------------GFCREGRMREARRLFRDIK-----GATPNHVTYTTLIDGYCR 315
LI C M E + ++ TPN +Y LI G C
Sbjct: 713 LIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICE 772
Query: 316 ANDLEEALRLREVMAA-KGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNV 374
+L A ++ + M +G+ P + +N++L CK + +A +++++M P
Sbjct: 773 VGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLE 832
Query: 375 TCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGM 434
+C LI K G+ V +L+ G D+ +K +I G K ++ EL M
Sbjct: 833 SCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVM 892
Query: 435 LDAGFSPSYCSYSWLVDG 452
G S +YS L++G
Sbjct: 893 EKNGCKFSSQTYSLLIEG 910
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 202 bits (514), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 133/449 (29%), Positives = 218/449 (48%), Gaps = 40/449 (8%)
Query: 162 MPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEK 221
+P + LL+++AK + D+V + +KM +LG+ N++ YN+LI+ C+ S +
Sbjct: 7 LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALA 66
Query: 222 LLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFC 281
LL +M + T ++L+ YC +A+A+ D+M G PD +T+ +LIHG
Sbjct: 67 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 126
Query: 282 REGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLE------------------- 320
+ EA L + +G PN VTY +++G C+ D++
Sbjct: 127 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVV 186
Query: 321 ----------------EALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM 364
+AL L + M KG+ P VVTY+S++ LC GR DA++LL++M
Sbjct: 187 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 246
Query: 365 NEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEM 424
EKKI P+ VT N LI+A+ K G A K+ + M++ + D FTY +LI+GFC +
Sbjct: 247 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRL 306
Query: 425 DIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRAL 484
D AK++ M+ P +Y+ L+ G+C E +L E RGL D Y L
Sbjct: 307 DKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 366
Query: 485 IRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL 544
I+ D AQ++F M +G+ D + Y+ L G+ + ++ D M + +
Sbjct: 367 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 426
Query: 545 MITLKIYRSFSASYAKDNEI---LDLFWS 570
+ + IY + K ++ DLF S
Sbjct: 427 KLDIYIYTTMIEGMCKAGKVDDGWDLFCS 455
Score = 197 bits (501), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 116/401 (28%), Positives = 203/401 (50%), Gaps = 2/401 (0%)
Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
+ + + D+M P+L V++N L K D+ + + KM + A++ ++N +
Sbjct: 132 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTI 191
Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
I + CK VD L EME K +R ++ TY++LI+ C G +A + M + I
Sbjct: 192 IDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 251
Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
+P++VT+N+LI F +EG+ EA +L D+ + P+ TY +LI+G+C + L++A +
Sbjct: 252 NPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQ 311
Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
+ E M +K +P + TYN++++ CK R+ D L EM+ + + D VT TLI
Sbjct: 312 MFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLF 371
Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
GD +A KV +M+ G+ D TY L+ G C +++ A E+ M +
Sbjct: 372 HDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIY 431
Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
Y+ +++G C + L +G+ +V Y +I C K + A L M
Sbjct: 432 IYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKM 491
Query: 505 QGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
+ +G L DS Y +L A+ R G+ A ++++ +M R +
Sbjct: 492 KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFV 532
Score = 172 bits (435), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 101/346 (29%), Positives = 174/346 (50%), Gaps = 2/346 (0%)
Query: 170 VLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFK 229
+++SL K R D ++K+M G+ N+ Y+ LI C +LL +M K
Sbjct: 190 TIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK 249
Query: 230 DVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREA 289
+ +L T+N LI + K+G EA + D M + I PDI TYNSLI+GFC R+ +A
Sbjct: 250 KINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKA 309
Query: 290 RRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRK 347
+++F + K P+ TY TLI G+C++ +E+ L M+ +G+ VTY ++++
Sbjct: 310 KQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQG 369
Query: 348 LCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLD 407
L +G +A ++ +M + PD +T + L++ C G A++V + M ++ + LD
Sbjct: 370 LFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLD 429
Query: 408 QFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLD 467
+ Y +I G CKA ++D +L + G P+ +Y+ ++ G C+K + LL
Sbjct: 430 IYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLK 489
Query: 468 EFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDS 513
+ G D Y LIR + + L M+ +GD+
Sbjct: 490 KMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDA 535
Score = 113 bits (283), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 109/233 (46%), Gaps = 2/233 (0%)
Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
Q+F+ M + P L L+ K + + +++++M G+V + Y LI
Sbjct: 311 QMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL 370
Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
D D +K+ +M V D+ TY+ L+ C G +AL V D M++ I DI
Sbjct: 371 FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI 430
Query: 271 VTYNSLIHGFCREGRMREARRLF--RDIKGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
Y ++I G C+ G++ + LF +KG PN VTY T+I G C L+EA L +
Sbjct: 431 YIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKK 490
Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
M G P TYN+++R ++G + L+ EM + D T + N
Sbjct: 491 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVAN 543
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 98/227 (43%), Gaps = 12/227 (5%)
Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
M + + P N L++A K+ + + +M G+ + +TY LI+ FC+ +
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 424 MDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRA 483
+ +A LL M+ G+ PS + S L++GYC+ + L+D+ V G D +
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 484 LIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRR 543
LI K A L + M G + V Y + + G+ ++L+ M +
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
Query: 544 LMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKEMQLRN 590
+ + I+ + S K + HV D + ++FKEM+ +
Sbjct: 181 IEADVVIFNTIIDSLCK--------YRHVDD----ALNLFKEMETKG 215
>sp|P0C7R3|PP106_ARATH Pentatricopeptide repeat-containing protein At1g64583,
mitochondrial OS=Arabidopsis thaliana GN=At1g64583 PE=2
SV=1
Length = 512
Score = 202 bits (513), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 123/420 (29%), Positives = 205/420 (48%), Gaps = 2/420 (0%)
Query: 122 IHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLT 181
+H P + + L+ ANL+ + + +M ++ + L++ T+L++ +
Sbjct: 63 VHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRL 122
Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
V KM++LG +I + L+H C + + L+ M ++ YNTL
Sbjct: 123 SFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTL 182
Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGA 299
I CK G AL + + ME++G+ D+VTYN+L+ G C GR +A R+ RD+ +
Sbjct: 183 IDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSI 242
Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
P+ VT+T LID + + +L+EA L + M V P VTYNSI+ LC GR+ DA +
Sbjct: 243 NPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKK 302
Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
+ M K P+ VT NTLI+ +CK MK+ RM G D FTY LIHG+C
Sbjct: 303 TFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYC 362
Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
+ ++ +A ++ M+ +P ++ L+ G C E+ L D+ + +
Sbjct: 363 QVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIV 422
Query: 480 VYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
Y +I CK +KV+ A LF + G+ D+ YT + + G + +++ M
Sbjct: 423 AYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRM 482
Score = 156 bits (394), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 95/289 (32%), Positives = 143/289 (49%), Gaps = 2/289 (0%)
Query: 258 QDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCR 315
+ME GIS D+ ++ LIH FCR R+ A + + G P+ VT+ +L+ G+C
Sbjct: 94 SQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCL 153
Query: 316 ANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVT 375
N + +A L +M G P VV YN+++ LCK G + A LLNEM +K + D VT
Sbjct: 154 VNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVT 213
Query: 376 CNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGML 435
NTL+ C G + A ++ M++ + D T+ ALI F K +D A+EL M+
Sbjct: 214 YNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMI 273
Query: 436 DAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVD 495
+ P+ +Y+ +++G C K D S+G +V Y LI FCK VD
Sbjct: 274 QSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVD 333
Query: 496 YAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL 544
+LF M G D Y +L + Y + G+ + DI M RR+
Sbjct: 334 EGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRV 382
Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 97/228 (42%)
Query: 312 GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAP 371
G+ + E+A L M P +V + +L R +M I+
Sbjct: 45 GFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISH 104
Query: 372 DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
D + LI+ +C+ + A+ V +M++ G T+ +L+HGFC + A L+
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164
Query: 432 FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
M+ +G+ P+ Y+ L+DG C L+LL+E +GL DV Y L+ C
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224
Query: 492 EKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
+ A R+ M I D V +T+L + + G ++ +M
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEM 272
Score = 79.0 bits (193), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 84/192 (43%)
Query: 353 RIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYK 412
R DA L EM + P V L+ A + + + +M G+ D +++
Sbjct: 51 RFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFT 110
Query: 413 ALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSR 472
LIH FC+ + A +L M+ G+ PS ++ L+ G+C N L+ V
Sbjct: 111 ILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKS 170
Query: 473 GLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKAC 532
G +V VY LI CK +++ A L N M+ G+ D V Y +L +G
Sbjct: 171 GYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDA 230
Query: 533 SDILDDMYRRRL 544
+ +L DM +R +
Sbjct: 231 ARMLRDMMKRSI 242
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 201 bits (511), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 117/401 (29%), Positives = 205/401 (51%), Gaps = 2/401 (0%)
Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
+ + + D+M P+L V++N L K TD+ + KM + A++ ++N +
Sbjct: 207 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTI 266
Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
I + CK VD L EME K +R ++ TY++LI+ C G +A + M + I
Sbjct: 267 IDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 326
Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
+P++VT+N+LI F +EG+ EA +L+ D+ + P+ TY +L++G+C + L++A +
Sbjct: 327 NPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQ 386
Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
+ E M +K +P VVTYN++++ CK R+ D L EM+ + + D VT TLI
Sbjct: 387 MFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLF 446
Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
GD +A KV +M+ G+ D TY L+ G C +++ A E+ M +
Sbjct: 447 HDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIY 506
Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
Y+ +++G C + L +G+ +V Y +I C K + A L M
Sbjct: 507 IYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKM 566
Query: 505 QGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
+ +G L +S Y +L A+ R G+ A ++++ +M R +
Sbjct: 567 KEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFV 607
Score = 200 bits (508), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 134/463 (28%), Positives = 222/463 (47%), Gaps = 40/463 (8%)
Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
D + +F M +P + LL+++AK + D+V + +KM +L +V ++ YN+LI
Sbjct: 68 DAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILI 127
Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
+ C+ S + LL +M + T ++L+ YC +A+A+ D+M G
Sbjct: 128 NCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYR 187
Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRAND------- 318
PD +T+ +LIHG + EA L + +G PN VTY +++G C+ D
Sbjct: 188 PDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNL 247
Query: 319 ----------------------------LEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
+++AL L + M KG+ P VVTY+S++ LC
Sbjct: 248 LNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCS 307
Query: 351 EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
GR DA++LL++M EKKI P+ VT N LI+A+ K G A K+ + M++ + D FT
Sbjct: 308 YGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFT 367
Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFV 470
Y +L++GFC +D AK++ M+ P +Y+ L+ G+C E +L E
Sbjct: 368 YNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMS 427
Query: 471 SRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPK 530
RGL D Y LI+ D AQ++F M +G+ D + Y+ L G+ +
Sbjct: 428 HRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLE 487
Query: 531 ACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI---LDLFWS 570
++ D M + + + + IY + K ++ DLF S
Sbjct: 488 KALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCS 530
Score = 196 bits (499), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 126/408 (30%), Positives = 195/408 (47%), Gaps = 4/408 (0%)
Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
++L ++K+ +P + LS L+ Y + K D + + DQM P T L++
Sbjct: 141 ALLGKMMKLGYEP--SIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIH 198
Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
L + +MVQ G N+ Y V+++ CK D D LL +ME + A
Sbjct: 199 GLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEA 258
Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
D+ +NT+I CK +AL + ME +GI P++VTY+SLI C GR +A +L
Sbjct: 259 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 318
Query: 294 RDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
D+ K PN VT+ LID + + EA +L + M + + P + TYNS++ C
Sbjct: 319 SDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMH 378
Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
R+ A ++ M K PD VT NTLI +CK ++ M GL+ D TY
Sbjct: 379 DRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTY 438
Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
LI G + D A+++ M+ G P +YS L+DG CN E L++ D
Sbjct: 439 TTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK 498
Query: 472 RGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
+ +D+ +Y +I CK KVD LF + G+ + V Y ++
Sbjct: 499 SEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTM 546
Score = 174 bits (442), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 132/502 (26%), Positives = 231/502 (46%), Gaps = 37/502 (7%)
Query: 19 AIMLKGHWAKL-LNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHS 77
A+ L G KL P+I + L+S LLN Y CH +S A + Y+
Sbjct: 139 ALALLGKMMKLGYEPSIVT-LSS------LLNGY--CHGKRISDAVALVDQMVEMGYRPD 189
Query: 78 LQSHWTMIHILTKNKHFKSAQNMLEKIALR----DFLSTPSVLNALVKIHDDPDGNSHVL 133
+ T+IH L + A +++++ R + ++ V+N L K D
Sbjct: 190 TITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD--------- 240
Query: 134 SWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQ 193
T L + ++M + + +++SL K R D ++K+M
Sbjct: 241 ------------TDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMET 288
Query: 194 LGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYE 253
G+ N+ Y+ LI C +LL +M K + +L T+N LI + K+G E
Sbjct: 289 KGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVE 348
Query: 254 ALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLID 311
A + D M + I PDI TYNSL++GFC R+ +A+++F + K P+ VTY TLI
Sbjct: 349 AEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIK 408
Query: 312 GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAP 371
G+C++ +E+ L M+ +G+ VTY ++++ L +G +A ++ +M + P
Sbjct: 409 GFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPP 468
Query: 372 DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
D +T + L++ C G A++V + M ++ + LD + Y +I G CKA ++D +L
Sbjct: 469 DIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLF 528
Query: 432 FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
+ G P+ +Y+ ++ G C+K + LL + G + Y LIR +
Sbjct: 529 CSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRD 588
Query: 492 EKVDYAQRLFNLMQGNGILGDS 513
+ L M+ +GD+
Sbjct: 589 GDKAASAELIREMRSCRFVGDA 610
Score = 112 bits (279), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 109/233 (46%), Gaps = 2/233 (0%)
Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
Q+F+ M + P + L+ K + + +++++M G+V + Y LI
Sbjct: 386 QMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL 445
Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
D D +K+ +M V D+ TY+ L+ C G +AL V D M++ I DI
Sbjct: 446 FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI 505
Query: 271 VTYNSLIHGFCREGRMREARRLF--RDIKGATPNHVTYTTLIDGYCRANDLEEALRLREV 328
Y ++I G C+ G++ + LF +KG PN VTY T+I G C L+EA L +
Sbjct: 506 YIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKK 565
Query: 329 MAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLIN 381
M G P TYN+++R ++G + L+ EM + D T + N
Sbjct: 566 MKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVAN 618
Score = 83.2 bits (204), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 116/283 (40%), Gaps = 35/283 (12%)
Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT 378
L++A+ L M P +V +N +L + K + L +M +I T N
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNI 125
Query: 379 LINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAG 438
LIN +C+ + A+ + +M++ G T +L++G+C K + A L+ M++ G
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 439 FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSR--------------GLC--------- 475
+ P +++ L+ G N + L+D V R GLC
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 245
Query: 476 ------------VDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAY 523
DV ++ +I CK VD A LF M+ GI + V Y+SL
Sbjct: 246 NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 305
Query: 524 WRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
G S +L DM +++ L + + ++ K+ + ++
Sbjct: 306 CSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVE 348
Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 109/254 (42%), Gaps = 12/254 (4%)
Query: 337 GVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVK 396
G Y ILR + ++ DA L M + + P V N L++A K+ + +
Sbjct: 49 GSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLG 108
Query: 397 NRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNK 456
+M ++ +TY LI+ FC+ ++ +A LL M+ G+ PS + S L++GYC+
Sbjct: 109 EKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHG 168
Query: 457 NNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIY 516
+ L+D+ V G D + LI K A L + M G + V Y
Sbjct: 169 KRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTY 228
Query: 517 TSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRG 576
+ + G+ ++L+ M ++ + I+ + S K + HV D
Sbjct: 229 GVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCK--------YRHVDD-- 278
Query: 577 LMSKHIFKEMQLRN 590
+ ++FKEM+ +
Sbjct: 279 --ALNLFKEMETKG 290
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 199 bits (507), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 133/447 (29%), Positives = 216/447 (48%), Gaps = 15/447 (3%)
Query: 154 DQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKS 213
+QM+ + L+ ++ +N + + V KM++LG +I + L++ C S
Sbjct: 107 EQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHS 166
Query: 214 SDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTY 273
+ L+ +M + D FT+ TLI EA+A+ D+M + G PD+VTY
Sbjct: 167 KRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTY 226
Query: 274 NSLIHGFCREGRMREARRLFRDIKGA--TPNHVTYTTLIDGYCRANDLEEALRLREVMAA 331
++++G C+ G + A L ++ A N V + T+ID C+ +E A+ L M
Sbjct: 227 GTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMET 286
Query: 332 KGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTAS 391
KG+ P VVTYNS++ LC GR DA+RLL+ M EKKI P+ VT N LI+A+ K G
Sbjct: 287 KGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVE 346
Query: 392 AMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVD 451
A K+ M++ + D TY LI+GFC +D AK++ M+ P+ +Y+ L++
Sbjct: 347 AEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLIN 406
Query: 452 GYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILG 511
G+C E ++L E RGL + Y +I+ F + D AQ +F M N +
Sbjct: 407 GFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPT 466
Query: 512 DSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASY---AKDNEILDLF 568
D + Y+ L + G+ I + + + + + IY + K E DLF
Sbjct: 467 DIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLF 526
Query: 569 WS----------HVVDRGLMSKHIFKE 585
S + + GL SK + +E
Sbjct: 527 CSLSIKPDVVTYNTMISGLCSKRLLQE 553
Score = 174 bits (442), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 109/400 (27%), Positives = 186/400 (46%), Gaps = 34/400 (8%)
Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
+ + + DQM P L ++N L K D+ + KM + AN+ ++N +I
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTII 265
Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
+ CK V+ L EME K +R ++ TYN+LI C G +A + M + I+
Sbjct: 266 DSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKIN 325
Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
P++VT+N+LI F +EG++ EA +L ++ + P+ +TY LI+G+C N L+EA ++
Sbjct: 326 PNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQM 385
Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
+ M +K P + TYN+++ CK R+ D L EM+++ + + VT T+I + +
Sbjct: 386 FKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQ 445
Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIA------------------ 427
GD SA V +M+ + D TY L+HG C ++D A
Sbjct: 446 AGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFI 505
Query: 428 -KELLFGMLDAG-------------FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRG 473
++ GM AG P +Y+ ++ G C+K + L + G
Sbjct: 506 YNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDG 565
Query: 474 LCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDS 513
+ Y LIR + + L M+ +G +GD+
Sbjct: 566 TLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDA 605
Score = 143 bits (361), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 118/472 (25%), Positives = 204/472 (43%), Gaps = 61/472 (12%)
Query: 47 LLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIAL 106
LLN Y CH +S A + YK + T+IH L + A +++++
Sbjct: 159 LLNGY--CHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQ 216
Query: 107 R----DFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLM 162
R D ++ +V+N L K D L + ++M +
Sbjct: 217 RGCQPDLVTYGTVVNGLCKRGD---------------------IDLALNLLNKMEAARIK 255
Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
++ +++SL K R ++ ++ +M G+ N+ YN LI+ C +L
Sbjct: 256 ANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRL 315
Query: 223 LCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR 282
L M K + ++ T+N LI + K+G EA + + M + I PD +TYN LI+GFC
Sbjct: 316 LSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCM 375
Query: 283 EGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVT 340
R+ EA+++F+ + K PN TY TLI+G+C+ +E+ + L M+ +G+ VT
Sbjct: 376 HNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVT 435
Query: 341 YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG--DTA-------- 390
Y +I++ + G A + +M ++ D +T + L++ C G DTA
Sbjct: 436 YTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQ 495
Query: 391 -SAMK----VKNRMLEA-----------------GLMLDQFTYKALIHGFCKAKEMDIAK 428
S M+ + N M+E + D TY +I G C + + A
Sbjct: 496 KSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEAD 555
Query: 429 ELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSV 480
+L M + G P+ +Y+ L+ + A +L+ E S G D S
Sbjct: 556 DLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDAST 607
Score = 106 bits (265), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 135/284 (47%), Gaps = 2/284 (0%)
Query: 285 RMREARRLFRDIKGATP--NHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYN 342
++ +A LF D+ + P + V + L+ + N E + L E M G+ + TY+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 343 SILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEA 402
+ C+ ++ A +L +M + PD VT ++L+N YC + A+ + ++M+E
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 403 GLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEAL 462
G D FT+ LIHG + A L+ M+ G P +Y +V+G C + + +
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 463 LKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYA 522
L LL++ + + +V ++ +I CK V+ A LF M+ GI + V Y SL
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINC 302
Query: 523 YWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
G S +L +M +++ + + + ++ K+ ++++
Sbjct: 303 LCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVE 346
Score = 102 bits (254), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 111/236 (47%), Gaps = 11/236 (4%)
Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
Q+F M + +P++ L+N K + + +++++M Q G+V N Y +I
Sbjct: 384 QMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGF 443
Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDI 270
++ D D + + +M V D+ TY+ L+ C G AL + +++ + +I
Sbjct: 444 FQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNI 503
Query: 271 VTYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMA 330
YN++I G C+ G++ EA LF + P+ VTY T+I G C L+EA L M
Sbjct: 504 FIYNTMIEGMCKAGKVGEAWDLFCSLS-IKPDVVTYNTMISGLCSKRLLQEADDLFRKMK 562
Query: 331 AKGVYPGVVTYNSILRKLCKEGRIRDANR-----LLNEMNEKKIAPDNVTCNTLIN 381
G P TYN+++R +RD +R L+ EM D T + + N
Sbjct: 563 EDGTLPNSGTYNTLIR-----ANLRDCDRAASAELIKEMRSSGFVGDASTISLVTN 613
Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 110/228 (48%), Gaps = 6/228 (2%)
Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
N + L+ + K +DG+++F +M L+ + T ++ + D V+
Sbjct: 397 NIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVF 456
Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
K+MV V +I Y++L+H C +D + ++ ++ ++F YNT+I CK
Sbjct: 457 KQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKA 516
Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTY 306
G EA D I PD+VTYN++I G C + ++EA LFR +K G PN TY
Sbjct: 517 GKVGEAW---DLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTY 573
Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRI 354
TLI R D + L + M + G + G + S++ + +GR+
Sbjct: 574 NTLIRANLRDCDRAASAELIKEMRSSG-FVGDASTISLVTNMLHDGRL 620
Score = 75.9 bits (185), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 102/232 (43%), Gaps = 4/232 (1%)
Query: 341 YNSILR-KLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRM 399
Y ILR +L ++ DA L +M + + P V N L++A K+ + + +M
Sbjct: 50 YREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQM 109
Query: 400 LEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNE 459
G+ D +TY I+ FC+ ++ +A +L M+ G+ P + S L++GYC+
Sbjct: 110 QTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRI 169
Query: 460 EALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
+ L+D+ V G D + LI K A L + M G D V Y ++
Sbjct: 170 SDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTV 229
Query: 520 AYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI---LDLF 568
+ G+ ++L+ M R+ + I+ + S K + +DLF
Sbjct: 230 VNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLF 281
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 199 bits (507), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 118/390 (30%), Positives = 194/390 (49%), Gaps = 4/390 (1%)
Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
S + ++K+ +P N+ S L+ + L++ D+M P L L+N
Sbjct: 144 SAMGKIIKLGYEP--NTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVN 201
Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
L + KMV+ G N Y +++ CKS +LL +ME ++++
Sbjct: 202 GLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKL 261
Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
D Y+ +I CK G A + + ME +GI+ +I+TYN LI GFC GR + +L
Sbjct: 262 DAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLL 321
Query: 294 RDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
RD+ + PN VT++ LID + + L EA L + M +G+ P +TY S++ CKE
Sbjct: 322 RDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKE 381
Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
+ AN++++ M K P+ T N LIN YCK +++ +M G++ D TY
Sbjct: 382 NHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTY 441
Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
LI GFC+ ++++AKEL M+ P+ +Y L+DG C+ E L++ ++
Sbjct: 442 NTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEK 501
Query: 472 RGLCVDVSVYRALIRRFCKKEKVDYAQRLF 501
+ +D+ +Y +I C KVD A LF
Sbjct: 502 SKMELDIGIYNIIIHGMCNASKVDDAWDLF 531
Score = 196 bits (499), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 126/454 (27%), Positives = 219/454 (48%), Gaps = 5/454 (1%)
Query: 122 IHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLT 181
IH P S L A K L + QM + + +L+ ++++N + R
Sbjct: 80 IHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKL 139
Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
+ + K+++LG N ++ LI+ C V + +L+ M + DL T NTL
Sbjct: 140 CLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTL 199
Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGA 299
+ C G EA+ + D+M G P+ VTY +++ C+ G+ A L R + +
Sbjct: 200 VNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNI 259
Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
+ V Y+ +IDG C+ L+ A L M KG+ ++TYN ++ C GR D +
Sbjct: 260 KLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAK 319
Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
LL +M ++KI P+ VT + LI+++ K G A ++ M+ G+ D TY +LI GFC
Sbjct: 320 LLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFC 379
Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
K +D A +++ M+ G P+ +++ L++GYC N + L+L + RG+ D
Sbjct: 380 KENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTV 439
Query: 480 VYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
Y LI+ FC+ K++ A+ LF M + + V Y L GE + +I + +
Sbjct: 440 TYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKI 499
Query: 540 YRRRLMITLKIYRSF---SASYAKDNEILDLFWS 570
+ ++ + + IY + +K ++ DLF S
Sbjct: 500 EKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCS 533
Score = 189 bits (480), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 109/396 (27%), Positives = 199/396 (50%), Gaps = 2/396 (0%)
Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
+ + + D+M + P+ +LN + K T + ++ +KM + + + Y+++I
Sbjct: 211 EAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270
Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
CK +D L EME K + ++ TYN LI +C G + + M + I+
Sbjct: 271 DGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKIN 330
Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
P++VT++ LI F +EG++REA L +++ +G P+ +TYT+LIDG+C+ N L++A ++
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQM 390
Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
++M +KG P + T+N ++ CK RI D L +M+ + + D VT NTLI +C+
Sbjct: 391 VDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCE 450
Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
+G A ++ M+ + + TYK L+ G C E + A E+ + +
Sbjct: 451 LGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGI 510
Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
Y+ ++ G CN + + L +G+ V Y +I CKK + A+ LF M+
Sbjct: 511 YNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKME 570
Query: 506 GNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
+G D Y L A+ G+ +++++ R
Sbjct: 571 EDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKR 606
Score = 168 bits (426), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 111/427 (25%), Positives = 196/427 (45%), Gaps = 40/427 (9%)
Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
D +++ M+ + + ++ L A K+ D V L +ME K + +L+T + +
Sbjct: 70 DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIM 129
Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGA 299
I +C+ A + ++ + G P+ +T+++LI+G C EGR+ EA L + G
Sbjct: 130 INCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGH 189
Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
P+ +T TL++G C + EA+ L + M G P VTY +L +CK G+ A
Sbjct: 190 KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAME 249
Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
LL +M E+ I D V + +I+ CK G +A + N M G+ + TY LI GFC
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFC 309
Query: 420 KAKEMD-----------------------------------IAKELLFGMLDAGFSPSYC 444
A D A+EL M+ G +P
Sbjct: 310 NAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTI 369
Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
+Y+ L+DG+C +N+ + +++D VS+G ++ + LI +CK ++D LF M
Sbjct: 370 TYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKM 429
Query: 505 QGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL---MITLKIYRSFSASYAKD 561
G++ D+V Y +L + G+ ++ +M R++ ++T KI +
Sbjct: 430 SLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGES 489
Query: 562 NEILDLF 568
+ L++F
Sbjct: 490 EKALEIF 496
Score = 160 bits (405), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 100/377 (26%), Positives = 180/377 (47%), Gaps = 37/377 (9%)
Query: 146 TQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNV 205
T +++ +M N+ +++++ L K D + ++ +M G+ NI YN+
Sbjct: 244 TALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNI 303
Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
LI C + D KLL +M + + ++ T++ LI + K+G EA + M G
Sbjct: 304 LIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRG 363
Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEAL 323
I+PD +TY SLI GFC+E + +A ++ + KG PN T+ LI+GYC+AN +++ L
Sbjct: 364 IAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGL 423
Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
L M+ +GV VTYN++++ C+ G++ A L EM +K+ P+ VT L++
Sbjct: 424 ELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGL 483
Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQF---------------------------------- 409
C G++ A+++ ++ ++ + LD
Sbjct: 484 CDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGV 543
Query: 410 -TYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDE 468
TY +I G CK + A+ L M + G +P +Y+ L+ + + +KL++E
Sbjct: 544 KTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEE 603
Query: 469 FVSRGLCVDVSVYRALI 485
G VD S + +I
Sbjct: 604 LKRCGFSVDASTIKMVI 620
Score = 140 bits (352), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/317 (29%), Positives = 148/317 (46%), Gaps = 37/317 (11%)
Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
L+ + N DG ++ M + P++ +VL++S K+ +++K+M+ G
Sbjct: 304 LIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRG 363
Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
+ + Y LI CK + +DK +++ M K ++ T+N LI YCK + L
Sbjct: 364 IAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGL 423
Query: 256 AVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGY 313
+ +M G+ D VTYN+LI GFC G++ A+ LF+++ + PN VTY L+DG
Sbjct: 424 ELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGL 483
Query: 314 CRANDLEEALRLRE-----------------------------------VMAAKGVYPGV 338
C + E+AL + E + KGV PGV
Sbjct: 484 CDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGV 543
Query: 339 VTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNR 398
TYN ++ LCK+G + +A L +M E APD T N LI A+ GD ++K+
Sbjct: 544 KTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEE 603
Query: 399 MLEAGLMLDQFTYKALI 415
+ G +D T K +I
Sbjct: 604 LKRCGFSVDASTIKMVI 620
Score = 80.9 bits (198), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 106/244 (43%), Gaps = 38/244 (15%)
Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHAC 210
Q+ D M P++ +L+N K D ++++KM GVVA+ YN LI
Sbjct: 389 QMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGF 448
Query: 211 CKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER------- 263
C+ ++ ++L EM + V ++ TY L+ C G +AL + +++E+
Sbjct: 449 CELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDI 508
Query: 264 ----------------------------EGISPDIVTYNSLIHGFCREGRMREARRLFRD 295
+G+ P + TYN +I G C++G + EA LFR
Sbjct: 509 GIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRK 568
Query: 296 IK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGR 353
++ G P+ TY LI + D ++++L E + G T ++ L +GR
Sbjct: 569 MEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDML-SDGR 627
Query: 354 IRDA 357
++ +
Sbjct: 628 LKKS 631
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/206 (20%), Positives = 89/206 (43%)
Query: 339 VTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNR 398
++Y LR + + DA L +M + P + + L +A K + + +
Sbjct: 54 LSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQ 113
Query: 399 MLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNN 458
M G+ + +T +I+ FC+ +++ +A + ++ G+ P+ ++S L++G C +
Sbjct: 114 MELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGR 173
Query: 459 EEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTS 518
L+L+D V G D+ L+ C K A L + M G ++V Y
Sbjct: 174 VSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGP 233
Query: 519 LAYAYWRAGEPKACSDILDDMYRRRL 544
+ ++G+ ++L M R +
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNI 259
>sp|Q0WKZ3|PP105_ARATH Pentatricopeptide repeat-containing protein At1g64580
OS=Arabidopsis thaliana GN=At1g64580 PE=2 SV=1
Length = 523
Score = 198 bits (503), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 129/441 (29%), Positives = 209/441 (47%), Gaps = 37/441 (8%)
Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
D +F +M +P + T +L +AK D+V +Y KM LG+ +++ + +LI
Sbjct: 62 DAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILI 121
Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRM------ 261
H C+ S + LL +M R + T +L+ +C+ EA+++ D M
Sbjct: 122 HCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFV 181
Query: 262 -----------------------------EREGISPDIVTYNSLIHGFCREGRMREARRL 292
E++GI D VTYN+LI G GR +A RL
Sbjct: 182 PNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARL 241
Query: 293 FRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
RD+ + PN + +T LID + + +L EA L + M + V P V TYNS++ C
Sbjct: 242 LRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCI 301
Query: 351 EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
G + DA + + M K PD VT NTLI +CK MK+ M GL+ D FT
Sbjct: 302 HGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFT 361
Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFV 470
Y LIHG+C+A ++++A+++ M+D G SP +Y+ L+D CN E L ++++
Sbjct: 362 YNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQ 421
Query: 471 SRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPK 530
+ VD+ Y +I+ C+ +K+ A LF + G+ D++ Y ++ R G +
Sbjct: 422 KSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQR 481
Query: 531 ACSDILDDMYRRRLMITLKIY 551
+ M M + +IY
Sbjct: 482 EADKLCRRMKEDGFMPSERIY 502
Score = 176 bits (447), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 113/372 (30%), Positives = 188/372 (50%), Gaps = 2/372 (0%)
Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
D + ++ +M+Q + +I + ++ K + D V L +ME + DL+++ L
Sbjct: 61 DDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTIL 120
Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GA 299
I +C+ ALA+ +M + G P IVT SL++GFC+ R +EA L + G
Sbjct: 121 IHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGF 180
Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
PN V Y T+I+G C+ DL AL + M KG+ VTYN+++ L GR DA R
Sbjct: 181 VPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAAR 240
Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
LL +M ++KI P+ + LI+ + K G+ A + M+ ++ + FTY +LI+GFC
Sbjct: 241 LLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFC 300
Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
+ AK + M+ G P +Y+ L+ G+C E +KL E +GL D
Sbjct: 301 IHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAF 360
Query: 480 VYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
Y LI +C+ K++ AQ++FN M G+ D V Y L G+ + +++D+
Sbjct: 361 TYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDL 420
Query: 540 YRRRLMITLKIY 551
+ + + + Y
Sbjct: 421 QKSEMDVDIITY 432
Score = 154 bits (390), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 167/342 (48%), Gaps = 2/342 (0%)
Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
Q+ + + D M +P++ ++N L K+R + +V+ M + G+ A+ YN L
Sbjct: 166 QEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTL 225
Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
I S +LL +M + + ++ + LI + K+G EA + M R +
Sbjct: 226 ISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSV 285
Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
P++ TYNSLI+GFC G + +A+ +F + KG P+ VTY TLI G+C++ +E+ ++
Sbjct: 286 VPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMK 345
Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
L M +G+ TYN+++ C+ G++ A ++ N M + ++PD VT N L++ C
Sbjct: 346 LFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLC 405
Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
G A+ + + ++ + +D TY +I G C+ ++ A L + G P
Sbjct: 406 NNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAI 465
Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
+Y ++ G C K + KL G +Y +R
Sbjct: 466 AYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLR 507
Score = 83.2 bits (204), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 110/238 (46%), Gaps = 12/238 (5%)
Query: 353 RIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYK 412
+ DA L EM + + P V ++ K+ + + ++M G+ D +++
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118
Query: 413 ALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSR 472
LIH FC+ + +A LL M+ GF PS + L++G+C N + + L+D
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178
Query: 473 GLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKAC 532
G +V +Y +I CK ++ A +F M+ GI D+V Y +L +G
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 238
Query: 533 SDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKEMQLRN 590
+ +L DM +R++ + + + ++ K+ +L+ +++++KEM R+
Sbjct: 239 ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLE------------ARNLYKEMIRRS 284
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 113/266 (42%)
Query: 301 PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRL 360
P+ V +T ++ + N + + L M G+ + ++ ++ C+ R+ A L
Sbjct: 77 PSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALAL 136
Query: 361 LNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCK 420
L +M + P VT +L+N +C+ A+ + + M G + + Y +I+G CK
Sbjct: 137 LGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCK 196
Query: 421 AKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSV 480
++++ A E+ + M G +Y+ L+ G N +LL + V R + +V
Sbjct: 197 NRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIF 256
Query: 481 YRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMY 540
+ ALI F K+ + A+ L+ M ++ + Y SL + G + D M
Sbjct: 257 FTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMV 316
Query: 541 RRRLMITLKIYRSFSASYAKDNEILD 566
+ + Y + + K + D
Sbjct: 317 SKGCFPDVVTYNTLITGFCKSKRVED 342
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 197 bits (501), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 129/456 (28%), Positives = 219/456 (48%), Gaps = 37/456 (8%)
Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
D + +F M +P + LL+++AK + D+V + +KM +LG+ N++ YN+LI
Sbjct: 68 DAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILI 127
Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
+ C+ S + LL +M + T ++L+ YC +A+A+ D+M G
Sbjct: 128 NCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYR 187
Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLE----- 320
PD +T+ +LIHG + EA L + +G PN VTY +++G C+ D++
Sbjct: 188 PDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNL 247
Query: 321 ------------------------------EALRLREVMAAKGVYPGVVTYNSILRKLCK 350
+AL L M KGV P V+TY+S++ LC
Sbjct: 248 LNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCN 307
Query: 351 EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
R DA+RLL++M E+KI P+ VT N LI+A+ K G A K+ + M++ + D FT
Sbjct: 308 YERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 367
Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFV 470
Y +LI+GFC +D AK + M+ P+ +Y+ L++G+C + ++L E
Sbjct: 368 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMS 427
Query: 471 SRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPK 530
RGL + Y LI F + D AQ +F M +G+ + + Y +L + G+ +
Sbjct: 428 QRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLE 487
Query: 531 ACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
+ + + R ++ T+ Y K ++ D
Sbjct: 488 KAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVED 523
Score = 194 bits (493), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 121/416 (29%), Positives = 203/416 (48%), Gaps = 4/416 (0%)
Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
++L ++K+ +P + LS L+ Y + K D + + DQM P T L++
Sbjct: 141 ALLGKMMKLGYEP--SIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIH 198
Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
L + +MVQ G N+ Y V+++ CK D+D LL +ME + A
Sbjct: 199 GLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEA 258
Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
++ Y+T+I CK +AL + ME +G+ P+++TY+SLI C R +A RL
Sbjct: 259 NVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLL 318
Query: 294 RDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
D+ + PN VT+ LID + + L EA +L + M + + P + TY+S++ C
Sbjct: 319 SDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 378
Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
R+ +A + M K P+ VT NTLIN +CK +++ M + GL+ + TY
Sbjct: 379 DRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTY 438
Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
LIHGF +A++ D A+ + M+ G P+ +Y+ L+DG C E + + +
Sbjct: 439 TTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR 498
Query: 472 RGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
+ + Y +I CK KV+ LF + G+ D +IY ++ + R G
Sbjct: 499 SKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKG 554
Score = 190 bits (483), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 110/369 (29%), Positives = 195/369 (52%), Gaps = 2/369 (0%)
Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
+ + + D+M P+L V++N L K D+ + + KM + AN+ +Y+ +
Sbjct: 207 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTV 266
Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
I + CK D L EME K VR ++ TY++LI+ C +A + M I
Sbjct: 267 IDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKI 326
Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
+P++VT+N+LI F +EG++ EA +L+ ++ + P+ TY++LI+G+C + L+EA
Sbjct: 327 NPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 386
Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
+ E+M +K +P VVTYN+++ CK RI + L EM+++ + + VT TLI+ +
Sbjct: 387 MFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFF 446
Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
+ D +A V +M+ G+ + TY L+ G CK +++ A + + + P+
Sbjct: 447 QARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIY 506
Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
+Y+ +++G C E L +G+ DV +Y +I FC+K + A LF M
Sbjct: 507 TYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKM 566
Query: 505 QGNGILGDS 513
+ +G L DS
Sbjct: 567 REDGPLPDS 575
Score = 131 bits (330), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 105/420 (25%), Positives = 186/420 (44%), Gaps = 59/420 (14%)
Query: 47 LLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIAL 106
LLN Y CH +S A + Y+ + T+IH L + A +++++
Sbjct: 161 LLNGY--CHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ 218
Query: 107 R----DFLSTPSVLNALVKIHD--------------DPDGNSHVLSWLVIFYANLKMTQD 148
R + ++ V+N L K D + N + S ++ + D
Sbjct: 219 RGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDD 278
Query: 149 GLQVFDQMRVHNLMPHLHACTVLLNSLAK-DRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
L +F +M + P++ + L++ L +R +D ++ M++ + N+ +N LI
Sbjct: 279 ALNLFTEMENKGVRPNVITYSSLISCLCNYERWSD-ASRLLSDMIERKINPNVVTFNALI 337
Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
A K + + EKL EM + + D+FTY++LI +C EA + + M +
Sbjct: 338 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 397
Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDIK------------------------------ 297
P++VTYN+LI+GFC+ R+ E LFR++
Sbjct: 398 PNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 457
Query: 298 -------GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
G PN +TY TL+DG C+ LE+A+ + E + + P + TYN ++ +CK
Sbjct: 458 FKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 517
Query: 351 EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
G++ D L ++ K + PD + NT+I+ +C+ G A + +M E G + D T
Sbjct: 518 AGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 95/201 (47%)
Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT 378
L++A+ L M P + +N +L + K + L +M I+ + T N
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNI 125
Query: 379 LINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAG 438
LIN +C+ + A+ + +M++ G T +L++G+C K + A L+ M++ G
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 439 FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQ 498
+ P +++ L+ G N + L+D V RG ++ Y ++ CK+ +D A
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAF 245
Query: 499 RLFNLMQGNGILGDSVIYTSL 519
L N M+ I + VIY+++
Sbjct: 246 NLLNKMEAAKIEANVVIYSTV 266
Score = 73.6 bits (179), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 102/235 (43%), Gaps = 3/235 (1%)
Query: 337 GVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVK 396
G Y ILR ++ DA L M + + P N L++A K+ + +
Sbjct: 49 GSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLG 108
Query: 397 NRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNK 456
+M G+ + +TY LI+ FC+ ++ +A LL M+ G+ PS + S L++GYC+
Sbjct: 109 EKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHG 168
Query: 457 NNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIY 516
+ L+D+ V G D + LI K A L + M G + V Y
Sbjct: 169 KRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTY 228
Query: 517 TSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSAS---YAKDNEILDLF 568
+ + G+ ++L+ M ++ + IY + S Y +++ L+LF
Sbjct: 229 GVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLF 283
>sp|Q9SV46|PP282_ARATH Pentatricopeptide repeat-containing protein At3g54980,
mitochondrial OS=Arabidopsis thaliana GN=At3g54980 PE=2
SV=1
Length = 851
Score = 197 bits (501), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 133/470 (28%), Positives = 223/470 (47%), Gaps = 41/470 (8%)
Query: 149 GLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIH 208
L +FD+M P+ +VL+ K+ + + YKKM LG+ ++ + +I
Sbjct: 358 ALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQ 417
Query: 209 ACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISP 268
K ++ KL E F+ A++F NT+++ CK+G EA + +ME GI P
Sbjct: 418 GWLKGQKHEEALKLFDE-SFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGP 476
Query: 269 DIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLR 326
++V+YN+++ G CR+ M AR +F +I KG PN+ TY+ LIDG R +D + AL +
Sbjct: 477 NVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVV 536
Query: 327 EVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKK------------------ 368
M + + V Y +I+ LCK G+ A LL M E+K
Sbjct: 537 NHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFK 596
Query: 369 ------------------IAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
I+P+ +T +L+N CK A+++++ M G+ LD
Sbjct: 597 EGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPA 656
Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFV 470
Y ALI GFCK M+ A L +L+ G +PS Y+ L+ G+ N N A L L + +
Sbjct: 657 YGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKML 716
Query: 471 SRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPK 530
GL D+ Y LI K + A L+ MQ G++ D +IYT + + G+
Sbjct: 717 KDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFV 776
Query: 531 ACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSH--VVDRGLM 578
+ ++M + + + IY + A + ++ + + F H ++D+G++
Sbjct: 777 KVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGIL 826
Score = 166 bits (420), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 102/388 (26%), Positives = 193/388 (49%), Gaps = 7/388 (1%)
Query: 132 VLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKM 191
+LSWL T + ++ +M + P++ + ++ + + D+ V+ +
Sbjct: 449 ILSWL----CKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNI 504
Query: 192 VQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMH 251
++ G+ N + Y++LI C ++ D +++ M ++ + Y T+I CK G
Sbjct: 505 LEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQT 564
Query: 252 YEALAVQDRM-EREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTT 308
+A + M E + + ++YNS+I GF +EG M A + ++ G +PN +TYT+
Sbjct: 565 SKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTS 624
Query: 309 LIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKK 368
L++G C+ N +++AL +R+ M KGV + Y +++ CK + A+ L +E+ E+
Sbjct: 625 LMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEG 684
Query: 369 IAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAK 428
+ P N+LI+ + +G+ +A+ + +ML+ GL D TY LI G K + +A
Sbjct: 685 LNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILAS 744
Query: 429 ELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRF 488
EL M G P Y+ +V+G K ++K+ +E + +V +Y A+I
Sbjct: 745 ELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGH 804
Query: 489 CKKEKVDYAQRLFNLMQGNGILGDSVIY 516
++ +D A RL + M GIL D +
Sbjct: 805 YREGNLDEAFRLHDEMLDKGILPDGATF 832
Score = 122 bits (306), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 114/420 (27%), Positives = 185/420 (44%), Gaps = 11/420 (2%)
Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
SV++ L+ ++P+ +W + + + D V + V + + A +L+
Sbjct: 74 SVIDVLLNRRNNPEAALRFYNWARPWRGSFE-DGDVFWVLIHILVSSPETYGRASDLLIR 132
Query: 174 SLAKDRLTDMVWKVYKKMV----QLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFK 229
++ T M + K+V G N +N L++A K D ++ +M
Sbjct: 133 YVSTSNPTPMASVLVSKLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLEL 192
Query: 230 DVRADLFTY-NTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
DV F Y N ++ ++ EA + RM G+ D VT L+ RE + E
Sbjct: 193 DV-IPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAE 251
Query: 289 ARR-LFRDI-KGATPNHVTYTTLIDGYCRANDLEEALRL-REVMAAKGVYPGVVTYNSIL 345
A L R I +GA P+ + Y+ + C+ DL A L RE+ K P TY S++
Sbjct: 252 ALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVI 311
Query: 346 RKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLM 405
K+G + DA RL +EM I+ + V +LI +CK D SA+ + ++M + G
Sbjct: 312 LASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPS 371
Query: 406 LDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKL 465
+ T+ LI F K EM+ A E M G +PS ++ G+ E LKL
Sbjct: 372 PNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKL 431
Query: 466 LDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWR 525
DE GL +V V ++ CK+ K D A L + M+ GI + V Y ++ + R
Sbjct: 432 FDESFETGLA-NVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCR 490
Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 141/309 (45%), Gaps = 3/309 (0%)
Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG-VVANIHLYNV 205
Q+ L+V + M N+ + ++N L K T ++ M++ + + YN
Sbjct: 530 QNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNS 589
Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
+I K ++D EM + ++ TY +L+ CK +AL ++D M+ +G
Sbjct: 590 IIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKG 649
Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEAL 323
+ DI Y +LI GFC+ M A LF ++ +G P+ Y +LI G+ ++ AL
Sbjct: 650 VKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAAL 709
Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
L + M G+ + TY +++ L K+G + A+ L EM + PD + ++N
Sbjct: 710 DLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGL 769
Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY 443
K G +K+ M + + + Y A+I G + +D A L MLD G P
Sbjct: 770 SKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDG 829
Query: 444 CSYSWLVDG 452
++ LV G
Sbjct: 830 ATFDILVSG 838
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 102/232 (43%), Gaps = 1/232 (0%)
Query: 298 GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDA 357
G N + L++ Y + + A+ + M V P N L L + + +A
Sbjct: 158 GFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEA 217
Query: 358 NRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHG 417
L + M + DNVT L+ A + A A++V +R +E G D Y +
Sbjct: 218 KELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQA 277
Query: 418 FCKAKEMDIAKELLFGMLDAGFS-PSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCV 476
CK ++ +A LL M + PS +Y+ ++ + N + ++L DE +S G+ +
Sbjct: 278 CCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISM 337
Query: 477 DVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
+V +LI CK + A LF+ M+ G +SV ++ L + + GE
Sbjct: 338 NVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGE 389
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 73/144 (50%)
Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
L+ + NL L ++ +M L L T L++ L KD + ++Y +M +G
Sbjct: 695 LISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVG 754
Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
+V + +Y V+++ K KV K+ EM+ +V ++ YN +IA + ++G EA
Sbjct: 755 LVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAF 814
Query: 256 AVQDRMEREGISPDIVTYNSLIHG 279
+ D M +GI PD T++ L+ G
Sbjct: 815 RLHDEMLDKGILPDGATFDILVSG 838
Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 87/203 (42%), Gaps = 1/203 (0%)
Query: 341 YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML 400
+N +L K+ + A ++N+M E + P N ++A + A ++ +RM+
Sbjct: 166 FNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMV 225
Query: 401 EAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEE 460
G+ D T + L+ + ++ A E+L ++ G P YS V C +
Sbjct: 226 AIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLA 285
Query: 461 ALLKLLDEFVSRGLCV-DVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
LL E + LCV Y ++I K+ +D A RL + M +GI + V TSL
Sbjct: 286 MANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSL 345
Query: 520 AYAYWRAGEPKACSDILDDMYRR 542
+ + + + + D M +
Sbjct: 346 ITGHCKNNDLVSALVLFDKMEKE 368
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 197 bits (501), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 146/540 (27%), Positives = 239/540 (44%), Gaps = 64/540 (11%)
Query: 76 HSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSW 135
H+L ++ MI+ L + A +L K+ + + LN+L+ +G H
Sbjct: 98 HNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLL------NGFCHG--- 148
Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
+ + + DQM P T L++ L + + ++MV G
Sbjct: 149 --------NRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKG 200
Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
++ Y +I+ CK + D LL +ME + AD+ Y+T+I CK +AL
Sbjct: 201 CQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDAL 260
Query: 256 AVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGY 313
+ M+ +GI PD+ TY+SLI C GR +A RL D+ + PN VT+ +LID +
Sbjct: 261 NLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAF 320
Query: 314 CRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDN 373
+ L EA +L + M + + P +VTYNS++ C R+ +A ++ M K PD
Sbjct: 321 AKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDV 380
Query: 374 VTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFG 433
VT NTLIN +CK M++ M GL+ + TY LIHGF +A + D A+ +
Sbjct: 381 VTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQ 440
Query: 434 MLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLD--------------EFVSRGLC---- 475
M+ G P+ +Y+ L+DG C E + + + +S G+C
Sbjct: 441 MVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGK 500
Query: 476 -----------------VDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTS 518
DV Y +I FCKK + A LF M+ +G L DS Y +
Sbjct: 501 VEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNT 560
Query: 519 LAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLM 578
L A+ R G+ A ++++ +M R F+ + + D+ +D+G +
Sbjct: 561 LIRAHLRDGDKAASAELIKEMRSCR----------FAGDASTYGLVTDMLHDGRLDKGFL 610
Score = 190 bits (482), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 114/383 (29%), Positives = 199/383 (51%), Gaps = 2/383 (0%)
Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
+ + +F +M P + + LL+++AK + D+V +KM LGV N++ YN++I
Sbjct: 48 EAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMI 107
Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
+ C+ S + +L +M + T N+L+ +C EA+A+ D+M G
Sbjct: 108 NCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQ 167
Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEALRL 325
PD VT+ +L+HG + + EA L +KG P+ VTY +I+G C+ + + AL L
Sbjct: 168 PDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNL 227
Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
M + VV Y++++ LCK + DA L EM+ K I PD T ++LI+ C
Sbjct: 228 LNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCN 287
Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
G + A ++ + MLE + + T+ +LI F K ++ A++L M+ P+ +
Sbjct: 288 YGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVT 347
Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
Y+ L++G+C + + ++ VS+ DV Y LI FCK +KV LF M
Sbjct: 348 YNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMS 407
Query: 506 GNGILGDSVIYTSLAYAYWRAGE 528
G++G++V YT+L + +++A +
Sbjct: 408 RRGLVGNTVTYTTLIHGFFQASD 430
Score = 190 bits (482), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 124/400 (31%), Positives = 197/400 (49%), Gaps = 4/400 (1%)
Query: 182 DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTL 241
D ++ +MV+ +I ++ L+ A K D V +ME V +L+TYN +
Sbjct: 47 DEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIM 106
Query: 242 IALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGA 299
I C++ ALA+ +M + G P IVT NSL++GFC R+ EA L + G
Sbjct: 107 INCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY 166
Query: 300 TPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANR 359
P+ VT+TTL+ G + N EA+ L E M KG P +VTY +++ LCK G A
Sbjct: 167 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALN 226
Query: 360 LLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFC 419
LLN+M + KI D V +T+I++ CK A+ + M G+ D FTY +LI C
Sbjct: 227 LLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLC 286
Query: 420 KAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVS 479
A LL ML+ +P+ +++ L+D + + KL DE + R + ++
Sbjct: 287 NYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIV 346
Query: 480 VYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
Y +LI FC +++D AQ++F LM L D V Y +L + +A + ++ DM
Sbjct: 347 TYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDM 406
Query: 540 YRRRLMITLKIYRSFSASY--AKDNEILDLFWSHVVDRGL 577
RR L+ Y + + A D + + + +V G+
Sbjct: 407 SRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGV 446
Score = 168 bits (426), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 120/476 (25%), Positives = 219/476 (46%), Gaps = 29/476 (6%)
Query: 47 LLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIAL 106
LLN + CH +S A + Y+ + T++H L ++ A ++E++ +
Sbjct: 141 LLNGF--CHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVV 198
Query: 107 R----DFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLM 162
+ D ++ +V+N L K +PD L + ++M +
Sbjct: 199 KGCQPDLVTYGAVINGLCK-RGEPDL--------------------ALNLLNKMEKGKIE 237
Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
+ + +++SL K R D ++ +M G+ ++ Y+ LI C +L
Sbjct: 238 ADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRL 297
Query: 223 LCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR 282
L +M + + ++ T+N+LI + K+G EA + D M + I P+IVTYNSLI+GFC
Sbjct: 298 LSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCM 357
Query: 283 EGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVT 340
R+ EA+++F + K P+ VTY TLI+G+C+A + + + L M+ +G+ VT
Sbjct: 358 HDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVT 417
Query: 341 YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML 400
Y +++ + +A + +M + P+ +T NTL++ CK G AM V +
Sbjct: 418 YTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ 477
Query: 401 EAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEE 460
++ + D +TY + G CKA +++ +L + G P +Y+ ++ G+C K +E
Sbjct: 478 KSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKE 537
Query: 461 ALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIY 516
L + G D Y LIR + + L M+ GD+ Y
Sbjct: 538 EAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTY 593
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
SV=1
Length = 974
Score = 197 bits (500), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 121/402 (30%), Positives = 197/402 (49%), Gaps = 20/402 (4%)
Query: 155 QMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSS 214
+MR ++P+ CT L+N K Y+ MV G++ + Y VL++ K+
Sbjct: 547 EMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKND 606
Query: 215 DVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYN 274
VD E++ EM K + D+F+Y LI + K G +A ++ D M EG++P+++ YN
Sbjct: 607 KVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYN 666
Query: 275 SLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAK 332
L+ GFCR G + +A+ L + +KG PN VTY T+IDGYC++ DL EA RL + M K
Sbjct: 667 MLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLK 726
Query: 333 GVYPGVVTYNSILRKLCKEGRIRDANRLLN--EMNEKKIAPDNVTCNTLINAYCKIGDTA 390
G+ P Y +++ C R+ D R + N+K A N LIN K G T
Sbjct: 727 GLVPDSFVYTTLVDGCC---RLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTE 783
Query: 391 SAMKVKNRMLEAGLMLDQF------TYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
+V NR+++ D+F TY +I CK ++ AKEL M +A P+
Sbjct: 784 LKTEVLNRLMDGSF--DRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVI 841
Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
+Y+ L++GY + + DE ++ G+ D +Y +I F K+ A L + M
Sbjct: 842 TYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQM 901
Query: 505 QGNGILGDSVIYT-----SLAYAYWRAGEPKACSDILDDMYR 541
+ D + +L + + GE + ++++M R
Sbjct: 902 FAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVR 943
Score = 184 bits (466), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 124/420 (29%), Positives = 195/420 (46%), Gaps = 3/420 (0%)
Query: 148 DG-LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
DG L++ + M L+P + VL++ L K + + + +M LGV + H Y++L
Sbjct: 259 DGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLL 318
Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
I K + D + L+ EM + + Y+ I + K+G+ +A A+ D M G+
Sbjct: 319 IDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGL 378
Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALR 324
P Y SLI G+CRE +R+ L ++K + TY T++ G C + DL+ A
Sbjct: 379 IPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYN 438
Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
+ + M A G P VV Y ++++ + R DA R+L EM E+ IAPD N+LI
Sbjct: 439 IVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLS 498
Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
K A M+E GL + FTY A I G+ +A E A + + M + G P+
Sbjct: 499 KAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKV 558
Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
+ L++ YC K V +G+ D Y L+ K +KVD A+ +F M
Sbjct: 559 LCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREM 618
Query: 505 QGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
+G GI D Y L + + G + S I D+M L + IY + + EI
Sbjct: 619 RGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEI 678
Score = 182 bits (462), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 104/407 (25%), Positives = 197/407 (48%), Gaps = 4/407 (0%)
Query: 160 NLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKV 219
N+ P+++ C + + ++K+ + + ++ M+ G++ Y LI C+ +V +
Sbjct: 344 NIKPYMYDCCICV--MSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQG 401
Query: 220 EKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHG 279
+LL EM+ +++ +TY T++ C G A + M G P++V Y +LI
Sbjct: 402 YELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKT 461
Query: 280 FCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPG 337
F + R +A R+ +++K G P+ Y +LI G +A ++EA M G+ P
Sbjct: 462 FLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPN 521
Query: 338 VVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKN 397
TY + + + A++ + EM E + P+ V C LIN YCK G A
Sbjct: 522 AFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYR 581
Query: 398 RMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKN 457
M++ G++ D TY L++G K ++D A+E+ M G +P SY L++G+
Sbjct: 582 SMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLG 641
Query: 458 NEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYT 517
N + + DE V GL +V +Y L+ FC+ +++ A+ L + M G+ ++V Y
Sbjct: 642 NMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYC 701
Query: 518 SLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 564
++ Y ++G+ + D+M + L+ +Y + + N++
Sbjct: 702 TIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDV 748
Score = 180 bits (457), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 128/491 (26%), Positives = 221/491 (45%), Gaps = 57/491 (11%)
Query: 145 MTQDGLQ-----VFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
M+++G+ +FD M L+P A L+ +++ +++ +M + +V +
Sbjct: 357 MSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVIS 416
Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
+ Y ++ C S D+D ++ EM R ++ Y TLI + + +A+ V
Sbjct: 417 PYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLK 476
Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRAN 317
M+ +GI+PDI YNSLI G + RM EAR ++ G PN TY I GY A+
Sbjct: 477 EMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEAS 536
Query: 318 DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRI----------------------- 354
+ A + + M GV P V ++ + CK+G++
Sbjct: 537 EFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYT 596
Query: 355 ------------RDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEA 402
DA + EM K IAPD + LIN + K+G+ A + + M+E
Sbjct: 597 VLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEE 656
Query: 403 GLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEAL 462
GL + Y L+ GFC++ E++ AKELL M G P+ +Y ++DGYC +
Sbjct: 657 GLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEA 716
Query: 463 LKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYA 522
+L DE +GL D VY L+ C+ V+ A +F + G + + +L
Sbjct: 717 FRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNK-KGCASSTAPFNALINW 775
Query: 523 YWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEIL-DLFWSHVVDRGLM--S 579
++ G+ + +++L+ RLM SF + K N++ ++ ++ G + +
Sbjct: 776 VFKFGKTELKTEVLN-----RLMDG-----SFD-RFGKPNDVTYNIMIDYLCKEGNLEAA 824
Query: 580 KHIFKEMQLRN 590
K +F +MQ N
Sbjct: 825 KELFHQMQNAN 835
Score = 149 bits (376), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 99/357 (27%), Positives = 168/357 (47%), Gaps = 45/357 (12%)
Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
D ++F +MR + P + + VL+N +K ++ +MV+ G+ N+ +YN+L+
Sbjct: 610 DAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLL 669
Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
C+S +++K ++LL EM K + + TY T+I YCK G EA + D M+ +G+
Sbjct: 670 GGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLV 729
Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDIK--------------------GAT------- 300
PD Y +L+ G CR + A +F K G T
Sbjct: 730 PDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVL 789
Query: 301 -------------PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRK 347
PN VTY +ID C+ +LE A L M + P V+TY S+L
Sbjct: 790 NRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNG 849
Query: 348 LCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRM-----LEA 402
K GR + + +E I PD++ + +INA+ K G T A+ + ++M ++
Sbjct: 850 YDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDD 909
Query: 403 GLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNE 459
G L T +AL+ GF K EM++A++++ M+ + P + L++ C +N+
Sbjct: 910 GCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCISSNQ 966
Score = 108 bits (271), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 143/312 (45%), Gaps = 16/312 (5%)
Query: 269 DIVTYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTL-IDGYCRANDLEEALRLRE 327
D+ TY+ LI CR G ++ L +D+ T TL +DG AL+L+E
Sbjct: 220 DVKTYHMLIIAHCRAGNVQ----LGKDVLFKTEKEFRTATLNVDG---------ALKLKE 266
Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
M KG+ P TY+ ++ LCK R+ DA LL EM+ ++ DN T + LI+ K
Sbjct: 267 SMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGR 326
Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
+ +A + + M+ G+ + + Y I K M+ AK L GM+ +G P +Y+
Sbjct: 327 NADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYA 386
Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGN 507
L++GYC + N +LL E R + + Y +++ C +D A + M +
Sbjct: 387 SLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIAS 446
Query: 508 GILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSF--SASYAKDNEIL 565
G + VIYT+L + + +L +M + + + Y S S AK +
Sbjct: 447 GCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEA 506
Query: 566 DLFWSHVVDRGL 577
F +V+ GL
Sbjct: 507 RSFLVEMVENGL 518
>sp|Q9FLL3|PP412_ARATH Pentatricopeptide repeat-containing protein At5g41170,
mitochondrial OS=Arabidopsis thaliana GN=At5g41170 PE=2
SV=1
Length = 527
Score = 196 bits (499), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 116/360 (32%), Positives = 185/360 (51%), Gaps = 2/360 (0%)
Query: 187 VYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYC 246
++ MV+ + +I + L++ K D V L ++ V DL+T N L+ +C
Sbjct: 59 LFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFC 118
Query: 247 KKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHV 304
+ Y A + +M + G PDIVT+ SLI+GFC RM EA + + G P+ V
Sbjct: 119 QSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVV 178
Query: 305 TYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM 364
YTT+ID C+ + AL L + M G+ P VV Y S++ LC GR RDA+ LL M
Sbjct: 179 MYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGM 238
Query: 365 NEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEM 424
++KI PD +T N LI+A+ K G A ++ N M+ + + FTY +LI+GFC +
Sbjct: 239 TKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCV 298
Query: 425 DIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRAL 484
D A+++ + M G P +Y+ L++G+C + +K+ E +GL + Y L
Sbjct: 299 DEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTL 358
Query: 485 IRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL 544
I+ F + K + AQ +F+ M G+ + Y L + G+ K I +DM +R +
Sbjct: 359 IQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREM 418
Score = 171 bits (432), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 108/414 (26%), Positives = 187/414 (45%), Gaps = 40/414 (9%)
Query: 154 DQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKS 213
D +++ + L+ C +L+N + + KM++LG +I + LI+ C
Sbjct: 96 DHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLG 155
Query: 214 SDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTY 273
+ +++ ++ +M ++ D+ Y T+I CK G AL++ D+ME GI PD+V Y
Sbjct: 156 NRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMY 215
Query: 274 NSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAA 331
SL++G C GR R+A L R + + P+ +T+ LID + + +A L M
Sbjct: 216 TSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIR 275
Query: 332 KGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTAS 391
+ P + TY S++ C EG + +A ++ M K PD V +LIN +CK
Sbjct: 276 MSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDD 335
Query: 392 AMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVD 451
AMK+ M + GL + TY LI GF + + ++A+E+ M+ G P+ +Y+ L+
Sbjct: 336 AMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLH 395
Query: 452 GYCNKNNEEALLKLLDEFVSR-----------------GLCVDVSVYRALI--------- 485
C + L + ++ R GLC + + +AL+
Sbjct: 396 CLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKRE 455
Query: 486 ------------RRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
+ CK KV A LF + G+ + V YT++ +R G
Sbjct: 456 MDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREG 509
Score = 157 bits (396), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 99/334 (29%), Positives = 167/334 (50%), Gaps = 16/334 (4%)
Query: 259 DRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRA 316
D ++ G+S D+ T N L++ FC+ + A + G P+ VT+T+LI+G+C
Sbjct: 96 DHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLG 155
Query: 317 NDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTC 376
N +EEA+ + M G+ P VV Y +I+ LCK G + A L ++M I PD V
Sbjct: 156 NRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMY 215
Query: 377 NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD 436
+L+N C G A + M + + D T+ ALI F K + A+EL M+
Sbjct: 216 TSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIR 275
Query: 437 AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDY 496
+P+ +Y+ L++G+C + + ++ ++G DV Y +LI FCK +KVD
Sbjct: 276 MSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDD 335
Query: 497 AQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSA 556
A ++F M G+ G+++ YT+L + + G+P ++ M R + ++ Y
Sbjct: 336 AMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTY----- 390
Query: 557 SYAKDNEILD-LFWSHVVDRGLMSKHIFKEMQLR 589
N +L L ++ V + LM IF++MQ R
Sbjct: 391 -----NVLLHCLCYNGKVKKALM---IFEDMQKR 416
Score = 112 bits (279), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 158/351 (45%), Gaps = 56/351 (15%)
Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANL--KMTQDG-----LQVFDQMRVHNLMPHLH 166
S++N +V++ PD V+ Y + + ++G L +FDQM + + P +
Sbjct: 163 SMVNQMVEMGIKPD---------VVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVV 213
Query: 167 ACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEM 226
T L+N L + + M + + ++ +N LI A K E+L EM
Sbjct: 214 MYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEM 273
Query: 227 EFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRM 286
+ ++FTY +LI +C +G EA + ME +G PD+V Y SLI+GFC+ ++
Sbjct: 274 IRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKV 333
Query: 287 REARRLFRDI--KGATPNHVTYTTLIDGY------------------------------- 313
+A ++F ++ KG T N +TYTTLI G+
Sbjct: 334 DDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVL 393
Query: 314 ----CRANDLEEALRLREVMAAK---GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
C +++AL + E M + GV P + TYN +L LC G++ A + +M +
Sbjct: 394 LHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRK 453
Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHG 417
+++ +T +I CK G +A+ + + G+ + TY +I G
Sbjct: 454 REMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISG 504
Score = 108 bits (271), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 129/267 (48%), Gaps = 7/267 (2%)
Query: 109 FLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHAC 168
FL + N ++++ P N + L+ + + Q+F M P + A
Sbjct: 263 FLDAEELYNEMIRMSIAP--NIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAY 320
Query: 169 TVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEF 228
T L+N K + D K++ +M Q G+ N Y LI + + +++ M
Sbjct: 321 TSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVS 380
Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMER---EGISPDIVTYNSLIHGFCREGR 285
+ V ++ TYN L+ C G +AL + + M++ +G++P+I TYN L+HG C G+
Sbjct: 381 RGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGK 440
Query: 286 MREARRLFRDIKGATPNHVTYTTLI--DGYCRANDLEEALRLREVMAAKGVYPGVVTYNS 343
+ +A +F D++ + T I G C+A ++ A+ L + +KGV P VVTY +
Sbjct: 441 LEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTT 500
Query: 344 ILRKLCKEGRIRDANRLLNEMNEKKIA 370
++ L +EG +A+ L +M E ++
Sbjct: 501 MISGLFREGLKHEAHVLFRKMKEDGVS 527
Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 108/226 (47%)
Query: 341 YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML 400
Y ILR + +A L M E + P + L+N K+ + + + +
Sbjct: 40 YREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQ 99
Query: 401 EAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEE 460
G+ D +T L++ FC++ + +A L M+ GF P +++ L++G+C N E
Sbjct: 100 IMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRME 159
Query: 461 ALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLA 520
+ ++++ V G+ DV +Y +I CK V+YA LF+ M+ GI D V+YTSL
Sbjct: 160 EAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLV 219
Query: 521 YAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 566
+G + +L M +R++ + + + ++ K+ + LD
Sbjct: 220 NGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLD 265
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 118/276 (42%), Gaps = 16/276 (5%)
Query: 294 RDIKGATPNHVTYTTLID------GYCRANDL----------EEALRLREVMAAKGVYPG 337
R +KG + ++++ L+D +C ++ EAL L M P
Sbjct: 12 RLVKGNSGKALSFSRLLDLSFWVRAFCNYREILRNGLHSLQFNEALDLFTHMVESRPLPS 71
Query: 338 VVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKN 397
++ + +L + K + L + + ++ D TCN L+N +C+ A
Sbjct: 72 IIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLG 131
Query: 398 RMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKN 457
+M++ G D T+ +LI+GFC M+ A ++ M++ G P Y+ ++D C
Sbjct: 132 KMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNG 191
Query: 458 NEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYT 517
+ L L D+ + G+ DV +Y +L+ C + A L M I D + +
Sbjct: 192 HVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFN 251
Query: 518 SLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRS 553
+L A+ + G+ ++ ++M R + + Y S
Sbjct: 252 ALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTS 287
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 196 bits (497), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 128/454 (28%), Positives = 218/454 (48%), Gaps = 32/454 (7%)
Query: 81 HWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFY 140
+ T+IH L+K A +LE++ L + PD + + +++
Sbjct: 255 YQTLIHSLSKCNRVNEALQLLEEMFLMGCV---------------PD--AETFNDVILGL 297
Query: 141 ANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAK----DRLTDMVWKVYKKMVQLGV 196
+ ++ ++M + P L+N L K D D+ +++ K
Sbjct: 298 CKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK------- 350
Query: 197 VANIHLYNVLIHACCKSSDVDKVEKLLCEMEFK-DVRADLFTYNTLIALYCKKGMHYEAL 255
I ++N LIH +D + +L +M + D+ TYN+LI Y K+G+ AL
Sbjct: 351 -PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLAL 409
Query: 256 AVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGY 313
V M +G P++ +Y L+ GFC+ G++ EA + ++ G PN V + LI +
Sbjct: 410 EVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAF 469
Query: 314 CRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDN 373
C+ + + EA+ + M KG P V T+NS++ LC+ I+ A LL +M + + +
Sbjct: 470 CKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANT 529
Query: 374 VTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFG 433
VT NTLINA+ + G+ A K+ N M+ G LD+ TY +LI G C+A E+D A+ L
Sbjct: 530 VTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEK 589
Query: 434 MLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEK 493
ML G +PS S + L++G C E ++ E V RG D+ + +LI C+ +
Sbjct: 590 MLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGR 649
Query: 494 VDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
++ +F +Q GI D+V + +L + G
Sbjct: 650 IEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGG 683
Score = 191 bits (486), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 147/543 (27%), Positives = 238/543 (43%), Gaps = 32/543 (5%)
Query: 25 HWAKLLNPNIASSLTSTAIHKVL-LNLYNCCHIP---SLSCAFFKWAESAVPNYKHSLQS 80
W KLL P SL ++ HK+ LY +P S S F W S Y+HS
Sbjct: 56 EWEKLLKPFDLDSLRNS-FHKITPFQLYKLLELPLNVSTSMELFSWTGSQ-NGYRHSFDV 113
Query: 81 HWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHD---------------- 124
+ +I L N FK+ +L ++ + S+ ++++ +D
Sbjct: 114 YQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMR 173
Query: 125 -----DPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDR 179
+P S+ + ++ N VF M + P L V++ +
Sbjct: 174 NVYSCEPTFKSYNVVLEILVSGNCHKV--AANVFYDMLSRKIPPTLFTFGVVMKAFCAVN 231
Query: 180 LTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYN 239
D + + M + G V N +Y LIH+ K + V++ +LL EM D T+N
Sbjct: 232 EIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFN 291
Query: 240 TLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGA 299
+I CK EA + +RM G +PD +TY L++G C+ GR+ A+ LF I
Sbjct: 292 DVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRI--P 349
Query: 300 TPNHVTYTTLIDGYCRANDLEEA-LRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDAN 358
P V + TLI G+ L++A L +++ + G+ P V TYNS++ KEG + A
Sbjct: 350 KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLAL 409
Query: 359 RLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGF 418
+L++M K P+ + L++ +CK+G A V N M GL + + LI F
Sbjct: 410 EVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAF 469
Query: 419 CKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDV 478
CK + A E+ M G P +++ L+ G C + + L LL + +S G+ +
Sbjct: 470 CKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANT 529
Query: 479 SVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDD 538
Y LI F ++ ++ A++L N M G D + Y SL RAGE + +
Sbjct: 530 VTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEK 589
Query: 539 MYR 541
M R
Sbjct: 590 MLR 592
Score = 162 bits (410), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 112/403 (27%), Positives = 190/403 (47%), Gaps = 9/403 (2%)
Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAK-DRLTDMVWKV 187
NS + L+ + + LQ+ ++M + +P ++ L K DR+ + K+
Sbjct: 251 NSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAA-KM 309
Query: 188 YKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCK 247
+M+ G + Y L++ CK VD + L ++ + ++ +NTLI +
Sbjct: 310 VNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLF----YRIPKPEIVIFNTLIHGFVT 365
Query: 248 KGMHYEALAV-QDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHV 304
G +A AV D + GI PD+ TYNSLI+G+ +EG + A + D+ KG PN
Sbjct: 366 HGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVY 425
Query: 305 TYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM 364
+YT L+DG+C+ ++EA + M+A G+ P V +N ++ CKE RI +A + EM
Sbjct: 426 SYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREM 485
Query: 365 NEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEM 424
K PD T N+LI+ C++ + A+ + M+ G++ + TY LI+ F + E+
Sbjct: 486 PRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEI 545
Query: 425 DIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRAL 484
A++L+ M+ G +Y+ L+ G C + L ++ + G L
Sbjct: 546 KEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNIL 605
Query: 485 IRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
I C+ V+ A M G D V + SL RAG
Sbjct: 606 INGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAG 648
Score = 155 bits (393), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 155/299 (51%), Gaps = 2/299 (0%)
Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
N + + LV + L + V ++M L P+ L+++ K+ +++
Sbjct: 423 NVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIF 482
Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
++M + G +++ +N LI C+ ++ LL +M + V A+ TYNTLI + ++
Sbjct: 483 REMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRR 542
Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTY 306
G EA + + M +G D +TYNSLI G CR G + +AR LF + G P++++
Sbjct: 543 GEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISC 602
Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
LI+G CR+ +EEA+ ++ M +G P +VT+NS++ LC+ GRI D + ++
Sbjct: 603 NILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQA 662
Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMD 425
+ I PD VT NTL++ CK G A + + +E G + + T+ L+ + +D
Sbjct: 663 EGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLD 721
Score = 155 bits (392), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 92/303 (30%), Positives = 159/303 (52%), Gaps = 2/303 (0%)
Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
L+V MR P++++ T+L++ K D + V +M G+ N +N LI A
Sbjct: 409 LEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISA 468
Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
CK + + ++ EM K + D++T+N+LI+ C+ AL + M EG+ +
Sbjct: 469 FCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVAN 528
Query: 270 IVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLRE 327
VTYN+LI+ F R G ++EAR+L ++ +G+ + +TY +LI G CRA ++++A L E
Sbjct: 529 TVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFE 588
Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
M G P ++ N ++ LC+ G + +A EM + PD VT N+LIN C+ G
Sbjct: 589 KMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAG 648
Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
+ + ++ G+ D T+ L+ CK + A LL ++ GF P++ ++S
Sbjct: 649 RIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWS 708
Query: 448 WLV 450
L+
Sbjct: 709 ILL 711
Score = 148 bits (373), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 107/404 (26%), Positives = 185/404 (45%), Gaps = 8/404 (1%)
Query: 170 VLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEME-F 228
VL+ L + + ++ +M G+V L+ ++ K+ + +L+ EM
Sbjct: 116 VLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNV 175
Query: 229 KDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMRE 288
+YN ++ + H A V M I P + T+ ++ FC +
Sbjct: 176 YSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDS 235
Query: 289 ARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILR 346
A L RD+ G PN V Y TLI + N + EAL+L E M G P T+N ++
Sbjct: 236 ALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVIL 295
Query: 347 KLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLML 406
LCK RI +A +++N M + APD++T L+N CKIG +A + R+ + +++
Sbjct: 296 GLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVI 355
Query: 407 DQFTYKALIHGFCKAKEMDIAKELLFGMLDA-GFSPSYCSYSWLVDGYCNKNNEEALLKL 465
+ LIHGF +D AK +L M+ + G P C+Y+ L+ GY + L++
Sbjct: 356 ----FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEV 411
Query: 466 LDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWR 525
L + ++G +V Y L+ FCK K+D A + N M +G+ ++V + L A+ +
Sbjct: 412 LHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCK 471
Query: 526 AGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFW 569
+I +M R+ + + S + + +EI W
Sbjct: 472 EHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALW 515
>sp|Q9SH60|PP103_ARATH Pentatricopeptide repeat-containing protein At1g64100
OS=Arabidopsis thaliana GN=At1g64100 PE=2 SV=2
Length = 666
Score = 196 bits (497), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 138/554 (24%), Positives = 254/554 (45%), Gaps = 43/554 (7%)
Query: 24 GHWAKLLNPNIASSL-TSTAIHKVLLNLYN------C-CHIPSLSCAFFKWAESAVPNYK 75
G + ++ P++A SL I ++ LN+Y+ C C LS + + + ++
Sbjct: 114 GVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQ 173
Query: 76 HSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDP--------- 126
+ + T++H L A + + FL ++ + +V+I P
Sbjct: 174 PDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLI 233
Query: 127 -----DG-----------------NSHVLSWLVIFYANLKM--TQDGLQVFDQMRVHNLM 162
+G + V+++ I KM T+ L + +M ++
Sbjct: 234 NGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIK 293
Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
P + + +++ L KD ++ +M++ G+ N+ YN +I C ++L
Sbjct: 294 PDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRL 353
Query: 223 LCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCR 282
L +M +++ D+ T+N LI+ K+G +EA + D M I PD VTYNS+I+GFC+
Sbjct: 354 LRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCK 413
Query: 283 EGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYN 342
R +A+ +F + A+P+ VT+ T+ID YCRA ++E ++L ++ +G+ TYN
Sbjct: 414 HNRFDDAKHMFDLM--ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYN 471
Query: 343 SILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEA 402
+++ C+ + A L EM + PD +TCN L+ +C+ A+++ + +
Sbjct: 472 TLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMS 531
Query: 403 GLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEAL 462
+ LD Y +IHG CK ++D A +L + G P +Y+ ++ G+C K+
Sbjct: 532 KIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDA 591
Query: 463 LKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYA 522
L + G D S Y LIR K ++D + L + M+ NG GD+ +A
Sbjct: 592 NVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVADL 651
Query: 523 YWRAGEPKACSDIL 536
K+ SD+L
Sbjct: 652 ITDGRLDKSFSDML 665
Score = 192 bits (488), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 121/429 (28%), Positives = 198/429 (46%), Gaps = 41/429 (9%)
Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
+ + +FDQM L P + L+N L + + KMV G+ ++ Y ++
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268
Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
+ CK D LL +ME ++ D+ Y+ +I CK G H +A + M +GI+
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 328
Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
P++ TYN +I GFC GR +A+RL RD+ + P+ +T+ LI + L EA +L
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKL 388
Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
+ M + ++P VTYNS++ CK R DA + + M +PD VT NT+I+ YC+
Sbjct: 389 CDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCR 444
Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
M++ + GL+ + TY LIHGFC+ ++ A++L M+ G P +
Sbjct: 445 AKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTIT 504
Query: 446 YSWLVDGYCNKNNEEALLKLLD--------------EFVSRGLC---------------- 475
+ L+ G+C E L+L + + G+C
Sbjct: 505 CNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLP 564
Query: 476 -----VDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPK 530
DV Y +I FC K + A LF+ M+ NG D+ Y +L +AGE
Sbjct: 565 IHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEID 624
Query: 531 ACSDILDDM 539
+++ +M
Sbjct: 625 KSIELISEM 633
Score = 166 bits (420), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 107/368 (29%), Positives = 176/368 (47%), Gaps = 24/368 (6%)
Query: 225 EMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREG 284
+ME + + +++++N LI +C +L+ ++ + G PD+VT+N+L+HG C E
Sbjct: 131 KMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLED 190
Query: 285 RMREARRLFRDIK-----------------GATPNHVTYTTLIDGYCRANDLEEALRLRE 327
R+ EA LF + G TP +T+ TLI+G C + EA L
Sbjct: 191 RISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVN 250
Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
M KG++ VVTY +I+ +CK G + A LL++M E I PD V + +I+ CK G
Sbjct: 251 KMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDG 310
Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
+ A + + MLE G+ + FTY +I GFC A+ LL M++ +P +++
Sbjct: 311 HHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFN 370
Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGN 507
L+ + KL DE + R + D Y ++I FCK + D A+ +F+LM
Sbjct: 371 ALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASP 430
Query: 508 GILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKD---NEI 564
D V + ++ Y RA +L ++ RR L+ Y + + + N
Sbjct: 431 ----DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAA 486
Query: 565 LDLFWSHV 572
DLF +
Sbjct: 487 QDLFQEMI 494
Score = 63.9 bits (154), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 91/216 (42%), Gaps = 15/216 (6%)
Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT 378
L++A+ + M + V N ++ + R A L +M ++I + + N
Sbjct: 87 LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146
Query: 379 LINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAG 438
LI +C + ++ ++ + G D T+ L+HG C + A L M++ G
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206
Query: 439 F---------------SPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRA 483
F +P +++ L++G C + L+++ V +GL +DV Y
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266
Query: 484 LIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
++ CK A L + M+ I D VIY+++
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAI 302
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 196 bits (497), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 123/417 (29%), Positives = 201/417 (48%), Gaps = 6/417 (1%)
Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
S + ++K+ +PD + S L+ + L++ D+M P L L+N
Sbjct: 128 SAMGKIIKLGYEPD--TVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVN 185
Query: 174 SLA-KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVR 232
L +++D V + +MV+ G N Y ++ CKS +LL +ME + ++
Sbjct: 186 GLCLNGKVSDAVL-LIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIK 244
Query: 233 ADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRL 292
D Y+ +I CK G A + + ME +G DI+ Y +LI GFC GR + +L
Sbjct: 245 LDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKL 304
Query: 293 FRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
RD+ + TP+ V ++ LID + + L EA L + M +G+ P VTY S++ CK
Sbjct: 305 LRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCK 364
Query: 351 EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
E ++ AN +L+ M K P+ T N LIN YCK +++ +M G++ D T
Sbjct: 365 ENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVT 424
Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFV 470
Y LI GFC+ ++++AKEL M+ P SY L+DG C+ E L++ ++
Sbjct: 425 YNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIE 484
Query: 471 SRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
+ +D+ +Y +I C KVD A LF + G+ D Y + + G
Sbjct: 485 KSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKG 541
Score = 194 bits (493), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 130/491 (26%), Positives = 228/491 (46%), Gaps = 19/491 (3%)
Query: 53 CCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLST 112
CC LS AF + Y+ + T+I+ L A +++++ T
Sbjct: 117 CCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPT 176
Query: 113 PSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLL 172
LNALV N L+ V D + + D+M P+ +L
Sbjct: 177 LITLNALV--------NGLCLNGKV---------SDAVLLIDRMVETGFQPNEVTYGPVL 219
Query: 173 NSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVR 232
+ K T + ++ +KM + + + Y+++I CK +D L EME K +
Sbjct: 220 KVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFK 279
Query: 233 ADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRL 292
AD+ Y TLI +C G + + M + I+PD+V +++LI F +EG++REA L
Sbjct: 280 ADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEEL 339
Query: 293 FRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
+++ +G +P+ VTYT+LIDG+C+ N L++A + ++M +KG P + T+N ++ CK
Sbjct: 340 HKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCK 399
Query: 351 EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
I D L +M+ + + D VT NTLI +C++G A ++ M+ + D +
Sbjct: 400 ANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVS 459
Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFV 470
YK L+ G C E + A E+ + + Y+ ++ G CN + + L
Sbjct: 460 YKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLP 519
Query: 471 SRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPK 530
+G+ DV Y +I CKK + A LF M+ +G + Y L A+ G+
Sbjct: 520 LKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDAT 579
Query: 531 ACSDILDDMYR 541
+ +++++ R
Sbjct: 580 KSAKLIEEIKR 590
Score = 191 bits (485), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 126/463 (27%), Positives = 217/463 (46%), Gaps = 40/463 (8%)
Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
D + +F +M P L + L + +A+ + D+V + K+M G+ N++ +++I
Sbjct: 55 DAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMI 114
Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
+ CC+ + + ++ D T++TLI C +G EAL + DRM G
Sbjct: 115 NCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHK 174
Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTY------------------- 306
P ++T N+L++G C G++ +A L + G PN VTY
Sbjct: 175 PTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMEL 234
Query: 307 ----------------TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
+ +IDG C+ L+ A L M KG ++ Y +++R C
Sbjct: 235 LRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCY 294
Query: 351 EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
GR D +LL +M ++KI PD V + LI+ + K G A ++ M++ G+ D T
Sbjct: 295 AGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVT 354
Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFV 470
Y +LI GFCK ++D A +L M+ G P+ +++ L++GYC N + L+L +
Sbjct: 355 YTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMS 414
Query: 471 SRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPK 530
RG+ D Y LI+ FC+ K++ A+ LF M + D V Y L GEP+
Sbjct: 415 LRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPE 474
Query: 531 ACSDILDDMYRRRLMITLKIYRSF---SASYAKDNEILDLFWS 570
+I + + + ++ + + IY + +K ++ DLF S
Sbjct: 475 KALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCS 517
Score = 149 bits (375), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 110/376 (29%), Positives = 179/376 (47%), Gaps = 14/376 (3%)
Query: 217 DKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSL 276
D L EM R L ++ L ++ + + L + +ME +GI+ ++ T + +
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 277 IHGFCREGRMREA-RRLFRDIK-GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGV 334
I+ CR ++ A + + IK G P+ VT++TLI+G C + EAL L + M G
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 335 YPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMK 394
P ++T N+++ LC G++ DA L++ M E P+ VT ++ CK G TA AM+
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233
Query: 395 VKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYC 454
+ +M E + LD Y +I G CK +D A L M GF Y+ L+ G+C
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC 293
Query: 455 NKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSV 514
+ KLL + + R + DV + ALI F K+ K+ A+ L M GI D+V
Sbjct: 294 YAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTV 353
Query: 515 IYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVD 574
YTSL + + + + +LD M + ++ + Y K N ++D
Sbjct: 354 TYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKAN---------LID 404
Query: 575 RGLMSKHIFKEMQLRN 590
GL +F++M LR
Sbjct: 405 DGL---ELFRKMSLRG 417
Score = 134 bits (338), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/388 (25%), Positives = 177/388 (45%), Gaps = 19/388 (4%)
Query: 81 HWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFY 140
+ +I L K+ +A N+ ++ ++ F + + L++ G + W
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIR------GFCYAGRW----- 298
Query: 141 ANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANI 200
DG ++ M + P + A + L++ K+ +++K+M+Q G+ +
Sbjct: 299 ------DDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDT 352
Query: 201 HLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDR 260
Y LI CK + +DK +L M K ++ T+N LI YCK + + L + +
Sbjct: 353 VTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRK 412
Query: 261 MEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRAND 318
M G+ D VTYN+LI GFC G++ A+ LF+++ + P+ V+Y L+DG C +
Sbjct: 413 MSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGE 472
Query: 319 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNT 378
E+AL + E + + + YN I+ +C ++ DA L + K + PD T N
Sbjct: 473 PEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNI 532
Query: 379 LINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAG 438
+I CK G + A + +M E G + TY LI + + +L+ + G
Sbjct: 533 MIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCG 592
Query: 439 FSPSYCSYSWLVDGYCNKNNEEALLKLL 466
FS + +VD + +++ L +L
Sbjct: 593 FSVDASTVKMVVDMLSDGRLKKSFLDML 620
Score = 59.3 bits (142), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/254 (20%), Positives = 103/254 (40%), Gaps = 12/254 (4%)
Query: 337 GVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVK 396
G V+Y LR + + DA L EM + P + + L + + + +
Sbjct: 36 GKVSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLC 95
Query: 397 NRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNK 456
+M G+ + +T +I+ C+ +++ +A + ++ G+ P ++S L++G C +
Sbjct: 96 KQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLE 155
Query: 457 NNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIY 516
L+L+D V G + AL+ C KV A L + M G + V Y
Sbjct: 156 GRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTY 215
Query: 517 TSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRG 576
+ ++G+ ++L M R++ + Y KD + + F
Sbjct: 216 GPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAF-------- 267
Query: 577 LMSKHIFKEMQLRN 590
++F EM+++
Sbjct: 268 ----NLFNEMEIKG 277
>sp|Q9ZVX5|PP156_ARATH Pentatricopeptide repeat-containing protein At2g16880
OS=Arabidopsis thaliana GN=At2g16880 PE=2 SV=1
Length = 743
Score = 195 bits (495), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 142/559 (25%), Positives = 264/559 (47%), Gaps = 53/559 (9%)
Query: 10 DTKFIKTISAIML--KGHWAKLLNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWA 67
+++ +KT+++I+ K H+ + LNP I + + LL+ + P +FF+WA
Sbjct: 8 ESQLLKTLTSILTSEKTHFLETLNPYIPQ--ITQPLLTSLLSSPSLAKKPETLVSFFQWA 65
Query: 68 ESAVPNYKHSLQSHWTMIHI---LTKNKHFKSAQNMLEKIALRDFLSTPSVLNALV--KI 122
++++P S S +I + L + F A+++L +R ++ S+ N+L+ +
Sbjct: 66 QTSIPEAFPS-DSPLPLISVVRSLLSHHKFADAKSLLVSY-IRTSDASLSLCNSLLHPNL 123
Query: 123 HDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLT- 181
H P + + + Y + LQ+F +M L P+L C LL L + +
Sbjct: 124 HLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSF 183
Query: 182 --DMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYN 239
+V+ MV++GV N+ T+N
Sbjct: 184 SISSAREVFDDMVKIGVSLNVQ-----------------------------------TFN 208
Query: 240 TLIALYCKKGMHYEALAVQDRMERE-GISPDIVTYNSLIHGFCREGRMREARRLFRDIK- 297
L+ YC +G +AL + +RM E ++PD VTYN+++ ++GR+ + + L D+K
Sbjct: 209 VLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKK 268
Query: 298 -GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRD 356
G PN VTY L+ GYC+ L+EA ++ E+M V P + TYN ++ LC G +R+
Sbjct: 269 NGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMRE 328
Query: 357 ANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIH 416
L++ M K+ PD VT NTLI+ ++G + A K+ +M G+ +Q T+ +
Sbjct: 329 GLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLK 388
Query: 417 GFCKAKEMDIAKELLFGMLDA-GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLC 475
CK ++ + + ++D GFSP +Y L+ Y + L+++ E +G+
Sbjct: 389 WLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIK 448
Query: 476 VDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDI 535
++ ++ CK+ K+D A L N G + D V Y +L ++R + + ++
Sbjct: 449 MNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEM 508
Query: 536 LDDMYRRRLMITLKIYRSF 554
D+M + ++ T+ + S
Sbjct: 509 WDEMKKVKITPTVSTFNSL 527
Score = 162 bits (409), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 120/459 (26%), Positives = 214/459 (46%), Gaps = 15/459 (3%)
Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
LV Y L ++ Q+ + M+ N++P L +L+N L ++ M L
Sbjct: 281 LVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLK 340
Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
+ ++ YN LI C + + KL+ +ME V+A+ T+N + CK+ EA+
Sbjct: 341 LQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKR-EAV 399
Query: 256 A--VQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLID 311
V++ ++ G SPDIVTY++LI + + G + A + R++ KG N +T T++D
Sbjct: 400 TRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILD 459
Query: 312 GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAP 371
C+ L+EA L +G VTY +++ +E ++ A + +EM + KI P
Sbjct: 460 ALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITP 519
Query: 372 DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
T N+LI C G T AM+ + + E+GL+ D T+ ++I G+CK ++ A E
Sbjct: 520 TVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFY 579
Query: 432 FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKK 491
+ F P + + L++G C + E L + + VD Y +I FCK
Sbjct: 580 NESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEERE-VDTVTYNTMISAFCKD 638
Query: 492 EKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRR--RLMITLK 549
+K+ A L + M+ G+ D Y S G+ ++L + + L+
Sbjct: 639 KKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGKFGSMKRDLQ 698
Query: 550 IYRSFSASYAKDNEILD---LFWSHVVD----RGLMSKH 581
+ + + ++ E L+ + +S V+D RG + +H
Sbjct: 699 VETEKNPATSESKEELNTEAIAYSDVIDELCSRGRLKEH 737
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 113/251 (45%), Gaps = 30/251 (11%)
Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
L++ + + + L+++D+M+ + P + L+ L T++ + + ++ + G
Sbjct: 492 LIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESG 551
Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
++ + +N +I CK V+K + E + D +T N L+ CK+GM +AL
Sbjct: 552 LLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKAL 611
Query: 256 AVQDRM--EREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLID 311
+ + ERE D VTYN++I FC++ +++EA L ++ KG P+ TY + I
Sbjct: 612 NFFNTLIEERE---VDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFIS 668
Query: 312 GYCRANDLEEALRL------------REVMAAKGVYPGV-----------VTYNSILRKL 348
L E L R++ P + Y+ ++ +L
Sbjct: 669 LLMEDGKLSETDELLKKFSGKFGSMKRDLQVETEKNPATSESKEELNTEAIAYSDVIDEL 728
Query: 349 CKEGRIRDANR 359
C GR+++ +R
Sbjct: 729 CSRGRLKEHSR 739
>sp|Q9LN69|PPR50_ARATH Putative pentatricopeptide repeat-containing protein At1g19290
OS=Arabidopsis thaliana GN=At1g19290 PE=3 SV=2
Length = 904
Score = 192 bits (487), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 146/565 (25%), Positives = 278/565 (49%), Gaps = 19/565 (3%)
Query: 12 KFIKTISAIMLKGHWAKL--LNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAES 69
+ ++ +S +++ G + L L+ + + L ++ + ++ LN C I +L+ K+
Sbjct: 44 ELLERVSRLLVLGRYEALHDLSLDFSDELLNSILRRLRLNPEACLEIFNLASKQQKFR-- 101
Query: 70 AVPNYKHSLQSHWTMIHILTKNKHFKSAQNML-EKIALRDFLSTPSVLNALVKIHDDPDG 128
P+YK ++ M+HIL++ ++++ ++ L E +AL S V LV++ +
Sbjct: 102 --PDYK----AYCKMVHILSRARNYQQTKSYLCELVALNH--SGFVVWGELVRVFKEFSF 153
Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
+ V ++ YA + ++ L VFD M + +P L +C LL++L + + VY
Sbjct: 154 SPTVFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVY 213
Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFK-DVRADLFTYNTLIALYCK 247
+M+ V ++ +++++A C+S +VDK E E + ++ TYN+LI Y
Sbjct: 214 DQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAM 273
Query: 248 KGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGA--TPNHVT 305
G V M G+S ++VTY SLI G+C++G M EA +F +K +
Sbjct: 274 IGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHM 333
Query: 306 YTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMN 365
Y L+DGYCR + +A+R+ + M GV NS++ CK G++ +A ++ + MN
Sbjct: 334 YGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMN 393
Query: 366 EKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMD 425
+ + PD+ T NTL++ YC+ G A+K+ ++M + ++ TY L+ G+ +
Sbjct: 394 DWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFH 453
Query: 426 IAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
L ML G + S S L++ + +KL + ++RGL D +I
Sbjct: 454 DVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMI 513
Query: 486 RRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
CK EKV+ A+ + + + Y +L++ Y++ G K + + M R+ +
Sbjct: 514 SGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIF 573
Query: 546 ITLKIYRSFSAS---YAKDNEILDL 567
T+++Y + + Y N++ DL
Sbjct: 574 PTIEMYNTLISGAFKYRHLNKVADL 598
Score = 152 bits (384), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 181/364 (49%), Gaps = 2/364 (0%)
Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
L+ Y + ++ VF+ ++ L+ H VL++ + +V+ M+++G
Sbjct: 302 LIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIG 361
Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
V N + N LI+ CKS + + E++ M ++ D TYNTL+ YC+ G EAL
Sbjct: 362 VRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEAL 421
Query: 256 AVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGY 313
+ D+M ++ + P ++TYN L+ G+ R G + L++ + +G + ++ +TL++
Sbjct: 422 KLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEAL 481
Query: 314 CRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDN 373
+ D EA++L E + A+G+ +T N ++ LCK ++ +A +L+ +N + P
Sbjct: 482 FKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAV 541
Query: 374 VTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFG 433
T L + Y K+G+ A VK M G+ Y LI G K + ++ +L+
Sbjct: 542 QTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIE 601
Query: 434 MLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEK 493
+ G +P+ +Y L+ G+CN + E + +G+ ++V++ + + +K
Sbjct: 602 LRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDK 661
Query: 494 VDYA 497
+D A
Sbjct: 662 IDEA 665
Score = 136 bits (343), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 151/289 (52%), Gaps = 26/289 (8%)
Query: 155 QMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSS 214
++R L P + L+ + D + +M++ G+ N+++ + + ++ +
Sbjct: 601 ELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLD 660
Query: 215 DVDKVEKLLCEMEFKDVRADLF--TYNTL------IALYCKKGMHYEALAVQDRMEREGI 266
+D+ C + K V DL Y +L A C K A +V++ ++ +
Sbjct: 661 KIDEA----CLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKI-AESVENSTPKKLL 715
Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDIKGA---TPNHVTYTTLIDGYCRANDLEEAL 323
P+ + YN I G C+ G++ +AR+LF D+ + P+ TYT LI G A D+ +A
Sbjct: 716 VPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAF 775
Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
LR+ MA KG+ P +VTYN++++ LCK G + A RLL+++ +K I P+ +T NTLI+
Sbjct: 776 TLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGL 835
Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLF 432
K G+ A AM++K +M+E G L+ G K ++DI KE++
Sbjct: 836 VKSGNVAEAMRLKEKMIEKG----------LVRGSDKQGDVDIPKEVVL 874
Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 104/412 (25%), Positives = 188/412 (45%), Gaps = 6/412 (1%)
Query: 140 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVAN 199
Y+ + D L ++ M + +C+ LL +L K + K+++ ++ G++ +
Sbjct: 446 YSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTD 505
Query: 200 IHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQD 259
NV+I CK V++ +++L + + + TY L Y K G EA AV++
Sbjct: 506 TITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKE 565
Query: 260 RMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRAN 317
MER+GI P I YN+LI G + + + L +++ G TP TY LI G+C
Sbjct: 566 YMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIG 625
Query: 318 DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE-KKIAPDNVTC 376
+++A M KG+ V + I L + +I +A LL ++ + + P +
Sbjct: 626 MIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSL 685
Query: 377 NTLINAYCK--IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGM 434
+ A + A V+N + L+ + Y I G CKA +++ A++L +
Sbjct: 686 KEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDL 745
Query: 435 LDAG-FSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEK 493
L + F P +Y+ L+ G + L DE +G+ ++ Y ALI+ CK
Sbjct: 746 LSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGN 805
Query: 494 VDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
VD AQRL + + GI +++ Y +L ++G + + M + L+
Sbjct: 806 VDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGLV 857
Score = 119 bits (297), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 96/405 (23%), Positives = 176/405 (43%), Gaps = 37/405 (9%)
Query: 83 TMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYAN 142
T++ L K F A + E + R L+ LN ++ S L
Sbjct: 476 TLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMI-------------SGL----CK 518
Query: 143 LKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHL 202
++ + ++ D + + P + L + K + V + M + G+ I +
Sbjct: 519 MEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEM 578
Query: 203 YNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRME 262
YN LI K ++KV L+ E+ + + + TY LI +C GM +A A M
Sbjct: 579 YNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMI 638
Query: 263 REGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEA 322
+GI+ ++ + + + R ++ EA L + I V + L+ GY + EA
Sbjct: 639 EKGITLNVNICSKIANSLFRLDKIDEACLLLQKI-------VDFDLLLPGYQSLKEFLEA 691
Query: 323 -----LRLREVMAA-------KGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM-NEKKI 369
L+ +++ + K + P + YN + LCK G++ DA +L +++ + +
Sbjct: 692 SATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRF 751
Query: 370 APDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKE 429
PD T LI+ GD A +++ M G++ + TY ALI G CK +D A+
Sbjct: 752 IPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQR 811
Query: 430 LLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGL 474
LL + G +P+ +Y+ L+DG N ++L ++ + +GL
Sbjct: 812 LLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGL 856
Score = 113 bits (283), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 104/470 (22%), Positives = 196/470 (41%), Gaps = 45/470 (9%)
Query: 128 GNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKV 187
+ H+ L+ Y +D ++V D M + + C L+N K ++
Sbjct: 329 ADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQI 388
Query: 188 YKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCK 247
+ +M + + H YN L+ C++ VD+ KL +M K+V + TYN L+ Y +
Sbjct: 389 FSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSR 448
Query: 248 KGMHYEALAVQDRMEREGISP-----------------------------------DIVT 272
G ++ L++ M + G++ D +T
Sbjct: 449 IGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTIT 508
Query: 273 YNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMA 330
N +I G C+ ++ EA+ + ++ P TY L GY + +L+EA ++E M
Sbjct: 509 LNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYME 568
Query: 331 AKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTA 390
KG++P + YN+++ K + L+ E+ + + P T LI +C IG
Sbjct: 569 RKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMID 628
Query: 391 SAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAG-FSPSYCSYSWL 449
A M+E G+ L+ + + + ++D A LL ++D P Y S
Sbjct: 629 KAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEF 688
Query: 450 VDG---YCNKNNEEALLKLLDEFVSRGLCVDVS-VYRALIRRFCKKEKVDYAQRLF-NLM 504
++ C K + A + ++ + L V + VY I CK K++ A++LF +L+
Sbjct: 689 LEASATTCLKTQKIA--ESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLL 746
Query: 505 QGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSF 554
+ + D YT L + AG+ + D+M + ++ + Y +
Sbjct: 747 SSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNAL 796
>sp|Q9SUD8|PP340_ARATH Pentatricopeptide repeat-containing protein At4g28010
OS=Arabidopsis thaliana GN=At4g28010 PE=2 SV=1
Length = 704
Score = 192 bits (487), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 165/612 (26%), Positives = 262/612 (42%), Gaps = 65/612 (10%)
Query: 28 KLLNPNIASSLTSTAIHKVLLNLYNCCHI--PSLSCAFFKWAESAVPNYKHSLQSHWTMI 85
KLLNP + S L + A + L + C P L A + ++ + + M
Sbjct: 22 KLLNPRVYSKLVN-AFSETETKLRSLCEDSNPQLKNAVSVFQQAVDSGSSLAFAGNNLMA 80
Query: 86 HILTKNKH---FKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYA- 141
++ H F + MLE +F+S +L V++ + L +A
Sbjct: 81 KLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAF 140
Query: 142 ---NLKMTQDGL----------QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
N + GL + +MR ++LMP + + ++ + + + ++
Sbjct: 141 NVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELA 200
Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
+M G ++ + +LI A CK+ +D+ L EM+F + ADL Y +LI +C
Sbjct: 201 NEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDC 260
Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTY 306
G A+ D + G SP +TYN+LI GFC+ G+++EA +F + +G PN TY
Sbjct: 261 GELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTY 320
Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
T LIDG C +EAL+L +M K P VTYN I+ KLCK+G + DA ++ M +
Sbjct: 321 TGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKK 380
Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQ--FTYKALIHGFCK---- 420
++ PDN+T N L+ C GD A K+ ML+ D +Y ALIHG CK
Sbjct: 381 RRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRL 440
Query: 421 -------------------------------AKEMDIAKELLFGMLDAGFSPSYCSYSWL 449
A +++ A EL + D+ + +Y+ +
Sbjct: 441 HQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAM 500
Query: 450 VDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGI 509
+DG+C LL + L V Y L+ CK+ +D A RLF MQ +
Sbjct: 501 IDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNN 560
Query: 510 LGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAK----DNEIL 565
D V + + +AG+ K+ +L M R L L Y + K D I
Sbjct: 561 FPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAI- 619
Query: 566 DLFWSHVVDRGL 577
F+ +VD G
Sbjct: 620 -SFFDKMVDSGF 630
Score = 143 bits (360), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 114/382 (29%), Positives = 179/382 (46%), Gaps = 13/382 (3%)
Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
N + + L+ + T++ LQ+ + M + P+ +++N L KD L ++
Sbjct: 316 NVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIV 375
Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKD---VRADLFTYNTLIALY 245
+ M + + YN+L+ C D+D+ KLL M KD D+ +YN LI
Sbjct: 376 ELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLM-LKDSSYTDPDVISYNALIHGL 434
Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGA--TPNH 303
CK+ ++AL + D + + + D VT N L++ + G + +A L++ I + N
Sbjct: 435 CKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNS 494
Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNE 363
TYT +IDG+C+ L A L M + P V YN +L LCKEG + A RL E
Sbjct: 495 DTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEE 554
Query: 364 MNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKE 423
M PD V+ N +I+ K GD SA + M AGL D FTY LI+ F K
Sbjct: 555 MQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGY 614
Query: 424 MDIAKELLFGMLDAGFSPS--YCSYSWLVDGYCNKNNE-EALLKLLDEFVSRGLCVDVSV 480
+D A M+D+GF P C V YC E + L +L+ + V + + +D +
Sbjct: 615 LDEAISFFDKMVDSGFEPDAHICDS---VLKYCISQGETDKLTELVKKLVDKDIVLDKEL 671
Query: 481 YRALIRRFCKKE-KVDYAQRLF 501
++ C +D A+RL
Sbjct: 672 TCTVMDYMCNSSANMDLAKRLL 693
Score = 140 bits (353), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 104/402 (25%), Positives = 180/402 (44%), Gaps = 4/402 (0%)
Query: 149 GLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIH 208
G +FD++ P L+ K ++++ M++ GV N++ Y LI
Sbjct: 266 GKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLID 325
Query: 209 ACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISP 268
C + +LL M KD + TYN +I CK G+ +A+ + + M++ P
Sbjct: 326 GLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRP 385
Query: 269 DIVTYNSLIHGFCREGRMREARRLF----RDIKGATPNHVTYTTLIDGYCRANDLEEALR 324
D +TYN L+ G C +G + EA +L +D P+ ++Y LI G C+ N L +AL
Sbjct: 386 DNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALD 445
Query: 325 LREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYC 384
+ +++ K VT N +L K G + A L ++++ KI ++ T +I+ +C
Sbjct: 446 IYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFC 505
Query: 385 KIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYC 444
K G A + +M + L F Y L+ CK +D A L M P
Sbjct: 506 KTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVV 565
Query: 445 SYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
S++ ++DG + ++ LL GL D+ Y LI RF K +D A F+ M
Sbjct: 566 SFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKM 625
Query: 505 QGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMI 546
+G D+ I S+ GE ++++ + + +++
Sbjct: 626 VDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVL 667
Score = 126 bits (316), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 88/355 (24%), Positives = 168/355 (47%), Gaps = 4/355 (1%)
Query: 136 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG 195
L+ + L ++ ++F+ M + P+++ T L++ L T ++ M++
Sbjct: 288 LIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKD 347
Query: 196 VVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL 255
N YN++I+ CK V +++ M+ + R D TYN L+ C KG EA
Sbjct: 348 EEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEAS 407
Query: 256 AVQDRMEREG--ISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLID 311
+ M ++ PD+++YN+LIHG C+E R+ +A ++ + K + VT L++
Sbjct: 408 KLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLN 467
Query: 312 GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAP 371
+A D+ +A+ L + ++ + TY +++ CK G + A LL +M ++ P
Sbjct: 468 STLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQP 527
Query: 372 DNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELL 431
N L+++ CK G A ++ M D ++ +I G KA ++ A+ LL
Sbjct: 528 SVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLL 587
Query: 432 FGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
GM AG SP +YS L++ + + + D+ V G D + ++++
Sbjct: 588 VGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLK 642
>sp|P0C7Q9|PPR56_ARATH Pentatricopeptide repeat-containing protein At1g22960,
mitochondrial OS=Arabidopsis thaliana GN=At1g22960 PE=2
SV=1
Length = 718
Score = 191 bits (486), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 141/567 (24%), Positives = 240/567 (42%), Gaps = 108/567 (19%)
Query: 57 PSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVL 116
P ++ FF W + + K S Q+ M+ IL +N A + E+ L +
Sbjct: 99 PEIAFRFFNWIQRQ-SDVKQSRQAFAAMLEILAENDLMSEAYLVAERSID---LGMHEID 154
Query: 117 NALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLA 176
+ L+ D +L L+ Y M + L F++M +P + C ++L L
Sbjct: 155 DLLIDGSFDKLIALKLLDLLLWVYTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLR 214
Query: 177 KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEM-----EFKDV 231
R+ + VY+ M++ G++ + +N ++ +C K+ D+++V+K+ EM EF +V
Sbjct: 215 DSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEV 274
Query: 232 RADL------------------------------FTYNTLIALYCKKGMHYEALAVQDRM 261
++ +++N LI YCK+G+ +A V D M
Sbjct: 275 TYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEM 334
Query: 262 EREGI-------------------------------SPDIVTYNSLIHGFCREGRMREAR 290
GI +PD+V+YN+L+HG+ + G+ EA
Sbjct: 335 LNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEAS 394
Query: 291 RLFRDIKGAT--PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKL 348
LF D++ P+ VTY TLIDG C + +LE A RL+E M + ++P V+TY ++++
Sbjct: 395 LLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGF 454
Query: 349 CKEGRIRDANRLLNEMNEKKI------------------------------------APD 372
K G + A + +EM K I APD
Sbjct: 455 VKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPD 514
Query: 373 NVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLF 432
N I+ CK+G+ A++ + ++ GL+ D TY +I G+ + + +A+ L
Sbjct: 515 LTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYD 574
Query: 433 GMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKE 492
ML PS +Y L+ G+ E + E RG+ +V + AL+ CK
Sbjct: 575 EMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAG 634
Query: 493 KVDYAQRLFNLMQGNGILGDSVIYTSL 519
+D A R M+ GI + YT L
Sbjct: 635 NIDEAYRYLCKMEEEGIPPNKYSYTML 661
Score = 143 bits (361), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 116/476 (24%), Positives = 196/476 (41%), Gaps = 62/476 (13%)
Query: 66 WAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDD 125
W E N + S ++ +I+ +KN + A+ + F TP N L++
Sbjct: 261 WLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIE---- 316
Query: 126 PDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVW 185
Y + D V D+M + P + + +L D
Sbjct: 317 -------------GYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDAR 363
Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
++ M VV+ YN L+H K + L ++ D+ + TYNTLI
Sbjct: 364 ELLSSMAAPDVVS----YNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGL 419
Query: 246 CKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNH 303
C+ G A +++ M + I PD++TY +L+ GF + G + A ++ ++ KG P+
Sbjct: 420 CESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDG 479
Query: 304 VTYTTLIDGYCRANDLEEALRLREVMAAK------------------------------- 332
YTT G R D ++A RL E M A
Sbjct: 480 YAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQR 539
Query: 333 -----GVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
G+ P VTY +++R + G+ + A L +EM K++ P +T LI + K G
Sbjct: 540 KIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAG 599
Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
A + M + G+ + T+ AL++G CKA +D A L M + G P+ SY+
Sbjct: 600 RLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYT 659
Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCK---KEKVDYAQRL 500
L+ C+ E ++KL E + + + D +RAL + K +V++ +RL
Sbjct: 660 MLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKDHESREVEFLERL 715
Score = 137 bits (344), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 115/419 (27%), Positives = 170/419 (40%), Gaps = 43/419 (10%)
Query: 139 FYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVA 198
F N KM ++ + MR ++ L+ K L D W V +M+ G+
Sbjct: 283 FSKNGKM-EEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYP 341
Query: 199 NIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQ 258
YN+ I A C +D +LL M DV +YNTL+ Y K G EA +
Sbjct: 342 TTSTYNIYICALCDFGRIDDARELLSSMAAPDV----VSYNTLMHGYIKMGKFVEASLLF 397
Query: 259 DRMEREGISPDIVTYNSLIHGFCREGRMREARRL---------FRDI------------- 296
D + I P IVTYN+LI G C G + A+RL F D+
Sbjct: 398 DDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKN 457
Query: 297 ---------------KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVY-PGVVT 340
KG P+ YTT G R D ++A RL E M A + P +
Sbjct: 458 GNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTI 517
Query: 341 YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRML 400
YN + LCK G + A ++ + PD+VT T+I Y + G A + + ML
Sbjct: 518 YNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEML 577
Query: 401 EAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEE 460
L TY LI+G KA ++ A + M G P+ +++ L+ G C N +
Sbjct: 578 RKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNID 637
Query: 461 ALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSL 519
+ L + G+ + Y LI + C EK + +L+ M I D + +L
Sbjct: 638 EAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRAL 696
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 191 bits (484), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 121/378 (32%), Positives = 189/378 (50%), Gaps = 2/378 (0%)
Query: 191 MVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGM 250
MVQ + +I ++ L+ A K D V L +M+ + +L T N L+ +C+
Sbjct: 72 MVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQ 131
Query: 251 HYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGAT--PNHVTYTT 308
AL+ +M + G P IVT+ SL++GFCR R+ +A +F + G PN V Y T
Sbjct: 132 LSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNT 191
Query: 309 LIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKK 368
+IDG C++ ++ AL L M G+ P VVTYNS++ LC GR DA R+++ M +++
Sbjct: 192 IIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKRE 251
Query: 369 IAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAK 428
I PD T N LI+A K G + A + M+ L D TY LI+G C +D A+
Sbjct: 252 IYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAE 311
Query: 429 ELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRF 488
E+ M+ G P +YS L++GYC E +KL E RG+ + Y LI+ +
Sbjct: 312 EMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGY 371
Query: 489 CKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITL 548
C+ K++ A+ +F M G+ + + Y L + G+ + IL DM + + +
Sbjct: 372 CRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADI 431
Query: 549 KIYRSFSASYAKDNEILD 566
Y K E+ D
Sbjct: 432 VTYNIIIRGMCKAGEVAD 449
Score = 189 bits (479), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 110/380 (28%), Positives = 191/380 (50%), Gaps = 2/380 (0%)
Query: 150 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
+ +++QM++ + +L C +LLN + + KM++LG +I + L++
Sbjct: 101 IYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNG 160
Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
C+ V + +M + ++ YNT+I CK AL + +RME++GI PD
Sbjct: 161 FCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPD 220
Query: 270 IVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLRE 327
+VTYNSLI G C GR +A R+ + + P+ T+ LID + + EA E
Sbjct: 221 VVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYE 280
Query: 328 VMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIG 387
M + + P +VTY+ ++ LC R+ +A + M K PD VT + LIN YCK
Sbjct: 281 EMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSK 340
Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
MK+ M + G++ + TY LI G+C+A ++++A+E+ M+ G P+ +Y+
Sbjct: 341 KVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYN 400
Query: 448 WLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGN 507
L+ G C+ E L +L + G+ D+ Y +IR CK +V A ++ +
Sbjct: 401 VLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQ 460
Query: 508 GILGDSVIYTSLAYAYWRAG 527
G++ D YT++ ++ G
Sbjct: 461 GLMPDIWTYTTMMLGLYKKG 480
Score = 174 bits (441), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 108/390 (27%), Positives = 190/390 (48%), Gaps = 2/390 (0%)
Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
D L +F M +P + + LL++++K + D+V ++++M LG+ N+ N+L+
Sbjct: 64 DSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILL 123
Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
+ C+ S + L +M + T+ +L+ +C+ Y+AL + D+M G
Sbjct: 124 NCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYK 183
Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRL 325
P++V YN++I G C+ ++ A L ++ G P+ VTY +LI G C + +A R+
Sbjct: 184 PNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRM 243
Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
M + +YP V T+N+++ KEGR+ +A EM + + PD VT + LI C
Sbjct: 244 VSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCM 303
Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
A ++ M+ G D TY LI+G+CK+K+++ +L M G + +
Sbjct: 304 YSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVT 363
Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
Y+ L+ GYC ++ V G+ ++ Y L+ C K++ A + MQ
Sbjct: 364 YTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQ 423
Query: 506 GNGILGDSVIYTSLAYAYWRAGEPKACSDI 535
NG+ D V Y + +AGE DI
Sbjct: 424 KNGMDADIVTYNIIIRGMCKAGEVADAWDI 453
Score = 173 bits (439), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 106/351 (30%), Positives = 174/351 (49%), Gaps = 4/351 (1%)
Query: 163 PHLHACTVLLNSLAK-DRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEK 221
P + LLN + DR+ D ++ ++ +MV +G N+ +YN +I CKS VD
Sbjct: 149 PSIVTFGSLLNGFCRGDRVYDALY-MFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALD 207
Query: 222 LLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFC 281
LL ME + D+ TYN+LI+ C G +A + M + I PD+ T+N+LI
Sbjct: 208 LLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACV 267
Query: 282 REGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVV 339
+EGR+ EA + ++ + P+ VTY+ LI G C + L+EA + M +KG +P VV
Sbjct: 268 KEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVV 327
Query: 340 TYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRM 399
TY+ ++ CK ++ +L EM+++ + + VT LI YC+ G A ++ RM
Sbjct: 328 TYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRM 387
Query: 400 LEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNE 459
+ G+ + TY L+HG C +++ A +L M G +Y+ ++ G C
Sbjct: 388 VFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEV 447
Query: 460 EALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGIL 510
+ +GL D+ Y ++ KK A LF M+ +GIL
Sbjct: 448 ADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGIL 498
Score = 149 bits (375), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 105/368 (28%), Positives = 161/368 (43%), Gaps = 39/368 (10%)
Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
S L ++K+ +P + L+ + D L +FDQM P++ +++
Sbjct: 137 SFLGKMIKLGHEP--SIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIID 194
Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
L K + D + +M + G+ ++ YN LI C S +++ M +++
Sbjct: 195 GLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYP 254
Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
D+FT+N LI K+G EA + M R + PDIVTY+ LI+G C R+ EA +F
Sbjct: 255 DVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMF 314
Query: 294 ---------RDI----------------------------KGATPNHVTYTTLIDGYCRA 316
D+ +G N VTYT LI GYCRA
Sbjct: 315 GFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRA 374
Query: 317 NDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTC 376
L A + M GV+P ++TYN +L LC G+I A +L +M + + D VT
Sbjct: 375 GKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTY 434
Query: 377 NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD 436
N +I CK G+ A A + + GLM D +TY ++ G K A L M +
Sbjct: 435 NIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKE 494
Query: 437 AGFSPSYC 444
G P+ C
Sbjct: 495 DGILPNEC 502
Score = 82.8 bits (203), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 121/281 (43%), Gaps = 4/281 (1%)
Query: 299 ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDAN 358
A N Y ++ R L+++L L M P + ++ +L + K +
Sbjct: 42 AYSNGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVI 101
Query: 359 RLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGF 418
L +M I + TCN L+N +C+ + A+ +M++ G T+ +L++GF
Sbjct: 102 YLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGF 161
Query: 419 CKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDV 478
C+ + A + M+ G+ P+ Y+ ++DG C + L LL+ G+ DV
Sbjct: 162 CRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDV 221
Query: 479 SVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDD 538
Y +LI C + A R+ + M I D + +L A + G + ++
Sbjct: 222 VTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEE 281
Query: 539 MYRRRL---MITLKIYRSFSASYAKDNEILDLFWSHVVDRG 576
M RR L ++T + Y++ +E ++F +V +G
Sbjct: 282 MIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMF-GFMVSKG 321
Score = 73.6 bits (179), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 111/249 (44%), Gaps = 2/249 (0%)
Query: 331 AKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTA 390
++ Y Y +LR + ++ D+ L M + + P + L++A K+
Sbjct: 39 SRRAYSNGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYD 98
Query: 391 SAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLV 450
+ + +M G+ + T L++ FC+ ++ +A L M+ G PS ++ L+
Sbjct: 99 VVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLL 158
Query: 451 DGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGIL 510
+G+C + L + D+ V G +V +Y +I CK ++VD A L N M+ +GI
Sbjct: 159 NGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIG 218
Query: 511 GDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDL--F 568
D V Y SL +G + ++ M +R + + + + + K+ + + F
Sbjct: 219 PDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEF 278
Query: 569 WSHVVDRGL 577
+ ++ R L
Sbjct: 279 YEEMIRRSL 287
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 190 bits (482), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 123/417 (29%), Positives = 197/417 (47%), Gaps = 37/417 (8%)
Query: 148 DGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
D + +F M P + LL+++ K + D+V + KKM LG+ +++ +N++I
Sbjct: 68 DAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVI 127
Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
+ C V +L +M D T +L+ +C++ +A+++ D+M G
Sbjct: 128 NCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYK 187
Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
PDIV YN++I C+ R+ +A F++I KG PN VTYT L++G C ++ +A RL
Sbjct: 188 PDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARL 247
Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVT---------- 375
M K + P V+TY+++L K G++ +A L EM I PD VT
Sbjct: 248 LSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCL 307
Query: 376 ------------------C-------NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
C NTLIN +CK MK+ M + GL+ + T
Sbjct: 308 HDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVT 367
Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFV 470
Y LI GF +A ++D A+E M G SP +Y+ L+ G C+ E L + ++
Sbjct: 368 YNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQ 427
Query: 471 SRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
R + +D+ Y +IR CK KV+ A LF + G+ D V YT++ G
Sbjct: 428 KREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKG 484
Score = 184 bits (466), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 125/406 (30%), Positives = 197/406 (48%), Gaps = 7/406 (1%)
Query: 171 LLNSLAKDRLTDM----VWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEM 226
L L+K RL D+ ++ MV+ +I +N L+ A K D V L +M
Sbjct: 52 LRERLSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKM 111
Query: 227 EFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRM 286
E +R DL+T+N +I +C AL++ +M + G PD VT SL++GFCR R+
Sbjct: 112 EVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRV 171
Query: 287 REARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSI 344
+A L + G P+ V Y +ID C+ + +A + + KG+ P VVTY ++
Sbjct: 172 SDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTAL 231
Query: 345 LRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGL 404
+ LC R DA RLL++M +KKI P+ +T + L++A+ K G A ++ M+ +
Sbjct: 232 VNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSI 291
Query: 405 MLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLK 464
D TY +LI+G C +D A ++ M+ G SY+ L++G+C E +K
Sbjct: 292 DPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMK 351
Query: 465 LLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYW 524
L E RGL + Y LI+ F + VD AQ F+ M GI D Y L
Sbjct: 352 LFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLC 411
Query: 525 RAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWS 570
GE + I +DM +R + + + Y + K ++ + WS
Sbjct: 412 DNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEA-WS 456
Score = 170 bits (431), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 177/346 (51%), Gaps = 4/346 (1%)
Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
S+L ++K+ +PD + LV + D + + D+M P + A +++
Sbjct: 141 SILGKMLKLGYEPD--RVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIID 198
Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
SL K + + + +K++ + G+ N+ Y L++ C SS +LL +M K +
Sbjct: 199 SLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITP 258
Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
++ TY+ L+ + K G EA + + M R I PDIVTY+SLI+G C R+ EA ++F
Sbjct: 259 NVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMF 318
Query: 294 RDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
+ KG + V+Y TLI+G+C+A +E+ ++L M+ +G+ VTYN++++ +
Sbjct: 319 DLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQA 378
Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
G + A ++M+ I+PD T N L+ C G+ A+ + M + + LD TY
Sbjct: 379 GDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTY 438
Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKN 457
+I G CK +++ A L + G P +Y+ ++ G C K
Sbjct: 439 TTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKG 484
Score = 165 bits (418), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 98/365 (26%), Positives = 183/365 (50%), Gaps = 4/365 (1%)
Query: 149 GLQVFDQMRVHNLMPHLHACTVLLNSLAK-DRLTDMVWKVYKKMVQLGVVANIHLYNVLI 207
L + +M P L+N + +R++D V + KMV++G +I YN +I
Sbjct: 139 ALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAV-SLVDKMVEIGYKPDIVAYNAII 197
Query: 208 HACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGIS 267
+ CK+ V+ E+E K +R ++ TY L+ C +A + M ++ I+
Sbjct: 198 DSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKIT 257
Query: 268 PDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRL 325
P+++TY++L+ F + G++ EA+ LF ++ P+ VTY++LI+G C + ++EA ++
Sbjct: 258 PNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQM 317
Query: 326 REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK 385
++M +KG VV+YN+++ CK R+ D +L EM+++ + + VT NTLI + +
Sbjct: 318 FDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQ 377
Query: 386 IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCS 445
GD A + ++M G+ D +TY L+ G C E++ A + M +
Sbjct: 378 AGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVT 437
Query: 446 YSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQ 505
Y+ ++ G C E L +GL D+ Y ++ C K + + L+ M+
Sbjct: 438 YTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMK 497
Query: 506 GNGIL 510
G++
Sbjct: 498 QEGLM 502
Score = 116 bits (290), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 147/308 (47%), Gaps = 34/308 (11%)
Query: 54 CHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSA----QNMLEKIALRDF 109
C ++ AF + E + ++ ++ +++ L + + A +M++K +
Sbjct: 201 CKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNV 260
Query: 110 LSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQD-----------GL-------- 150
++ ++L+A VK N VL +F ++M+ D GL
Sbjct: 261 ITYSALLDAFVK-------NGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDE 313
Query: 151 --QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIH 208
Q+FD M + + + L+N K + + K++++M Q G+V+N YN LI
Sbjct: 314 ANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQ 373
Query: 209 ACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISP 268
++ DVDK ++ +M+F + D++TYN L+ C G +AL + + M++ +
Sbjct: 374 GFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDL 433
Query: 269 DIVTYNSLIHGFCREGRMREARRLF--RDIKGATPNHVTYTTLIDGYCRANDLEEALRLR 326
DIVTY ++I G C+ G++ EA LF +KG P+ VTYTT++ G C L E L
Sbjct: 434 DIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALY 493
Query: 327 EVMAAKGV 334
M +G+
Sbjct: 494 TKMKQEGL 501
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 190 bits (482), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 130/462 (28%), Positives = 214/462 (46%), Gaps = 53/462 (11%)
Query: 167 ACTVLLNSLAKD-RLTDMVWKVYKKMVQLGVVANIHLYNVLIHACC-------------- 211
A T LL L D R +D + V ++M +LG + N+ YN+L+ C
Sbjct: 124 AFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHM 183
Query: 212 ------------------------KSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCK 247
K D DK EM + + D+ TYN++IA CK
Sbjct: 184 MADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCK 243
Query: 248 KGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVT 305
+A+ V + M + G+ PD +TYNS++HG+C G+ +EA + ++ G P+ VT
Sbjct: 244 AQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVT 303
Query: 306 YTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMN 365
Y+ L+D C+ EA ++ + M +G+ P + TY ++L+ +G + + + LL+ M
Sbjct: 304 YSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMV 363
Query: 366 EKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMD 425
I PD+ + LI AY K G AM V ++M + GL + TY A+I CK+ ++
Sbjct: 364 RNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVE 423
Query: 426 IAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
A M+D G SP Y+ L+ G C N E +L+ E + RG+C++ + ++I
Sbjct: 424 DAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSII 483
Query: 486 RRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
CK+ +V +++LF LM G+ + + Y +L Y AG+ +L M L
Sbjct: 484 DSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLK 543
Query: 546 ITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKEMQ 587
Y + Y K + + D +FKEM+
Sbjct: 544 PNTVTYSTLINGYCKISRMEDALV------------LFKEME 573
Score = 189 bits (479), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 118/446 (26%), Positives = 207/446 (46%), Gaps = 40/446 (8%)
Query: 146 TQDGLQVFDQM---RVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHL 202
+Q+ L++ M R P + + T ++N K+ +D + Y +M+ G++ ++
Sbjct: 174 SQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVT 233
Query: 203 YNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRME 262
YN +I A CK+ +DK ++L M V D TYN+++ YC G EA+ +M
Sbjct: 234 YNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMR 293
Query: 263 REGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLE 320
+G+ PD+VTY+ L+ C+ GR EAR++F + +G P TY TL+ GY L
Sbjct: 294 SDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALV 353
Query: 321 EALRLREVMAAKGVYP-----------------------------------GVVTYNSIL 345
E L ++M G++P VTY +++
Sbjct: 354 EMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVI 413
Query: 346 RKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLM 405
LCK GR+ DA +M ++ ++P N+ N+LI+ C A ++ ML+ G+
Sbjct: 414 GILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGIC 473
Query: 406 LDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKL 465
L+ + ++I CK + +++L M+ G P+ +Y+ L++GYC + +KL
Sbjct: 474 LNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKL 533
Query: 466 LDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWR 525
L VS GL + Y LI +CK +++ A LF M+ +G+ D + Y + ++
Sbjct: 534 LSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQ 593
Query: 526 AGEPKACSDILDDMYRRRLMITLKIY 551
A ++ + I L Y
Sbjct: 594 TRRTAAAKELYVRITESGTQIELSTY 619
Score = 174 bits (441), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 120/448 (26%), Positives = 211/448 (47%), Gaps = 19/448 (4%)
Query: 62 AFFKWAES--AVPNYKHSLQSHWTMIHILTKNKHFKS---AQNMLEKIALRDFLSTPSVL 116
FFK +S A Y H + + ++T N + AQ M + + VL
Sbjct: 205 GFFKEGDSDKAYSTY-HEMLDRGILPDVVTYNSIIAALCKAQAMDKAM---------EVL 254
Query: 117 NALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLA 176
N +VK PD ++ + ++ Y + ++ + +MR + P + ++L++ L
Sbjct: 255 NTMVKNGVMPDCMTY--NSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLC 312
Query: 177 KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLF 236
K+ K++ M + G+ I Y L+ + ++ LL M + D +
Sbjct: 313 KNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHY 372
Query: 237 TYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI 296
++ LI Y K+G +A+ V +M ++G++P+ VTY ++I C+ GR+ +A F +
Sbjct: 373 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQM 432
Query: 297 --KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRI 354
+G +P ++ Y +LI G C N E A L M +G+ + +NSI+ CKEGR+
Sbjct: 433 IDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRV 492
Query: 355 RDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKAL 414
++ +L M + P+ +T NTLIN YC G AMK+ + M+ GL + TY L
Sbjct: 493 IESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTL 552
Query: 415 IHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGL 474
I+G+CK M+ A L M +G SP +Y+ ++ G A +L G
Sbjct: 553 INGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGT 612
Query: 475 CVDVSVYRALIRRFCKKEKVDYAQRLFN 502
+++S Y ++ CK + D A ++F
Sbjct: 613 QIELSTYNIILHGLCKNKLTDDALQMFQ 640
Score = 169 bits (428), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 108/393 (27%), Positives = 193/393 (49%), Gaps = 4/393 (1%)
Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
+L+ +V+ PD +V S L+ YA + VF +MR L P+ ++
Sbjct: 357 GLLDLMVRNGIHPD--HYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIG 414
Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
L K + +++M+ G+ +YN LIH C + ++ E+L+ EM + +
Sbjct: 415 ILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICL 474
Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
+ +N++I +CK+G E+ + + M R G+ P+++TYN+LI+G+C G+M EA +L
Sbjct: 475 NTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLL 534
Query: 294 RDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKE 351
+ G PN VTY+TLI+GYC+ + +E+AL L + M + GV P ++TYN IL+ L +
Sbjct: 535 SGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQT 594
Query: 352 GRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTY 411
R A L + E + T N +++ CK T A+++ + L L+ T+
Sbjct: 595 RRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTF 654
Query: 412 KALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVS 471
+I K D AK+L G P+Y +Y + + + E L +L
Sbjct: 655 NIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMED 714
Query: 472 RGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLM 504
G VD + ++R ++ ++ A +++
Sbjct: 715 NGCTVDSGMLNFIVRELLQRGEITRAGTYLSMI 747
Score = 165 bits (418), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 112/390 (28%), Positives = 184/390 (47%), Gaps = 10/390 (2%)
Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLG---VVANIHLY 203
+D VFD++ ++ L +A+D V + Y +M + G V ++ Y
Sbjct: 32 EDARHVFDELLRRGRGASIYGLNRALADVARDSPAAAVSR-YNRMARAGADEVTPDLCTY 90
Query: 204 NVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEAL-AVQDRME 262
+LI CC++ +D L + K R D + L+ C +A+ V RM
Sbjct: 91 GILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 150
Query: 263 REGISPDIVTYNSLIHGFCREGRMREARRLFRDIK-----GATPNHVTYTTLIDGYCRAN 317
G P++ +YN L+ G C E R +EA L + G+ P+ V+YTT+I+G+ +
Sbjct: 151 ELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEG 210
Query: 318 DLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCN 377
D ++A M +G+ P VVTYNSI+ LCK + A +LN M + + PD +T N
Sbjct: 211 DSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYN 270
Query: 378 TLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA 437
++++ YC G A+ +M G+ D TY L+ CK A+++ M
Sbjct: 271 SILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKR 330
Query: 438 GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYA 497
G P +Y L+ GY K + LLD V G+ D V+ LI + K+ KVD A
Sbjct: 331 GLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQA 390
Query: 498 QRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
+F+ M+ G+ ++V Y ++ ++G
Sbjct: 391 MLVFSKMRQQGLNPNAVTYGAVIGILCKSG 420
Score = 164 bits (414), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 112/416 (26%), Positives = 191/416 (45%), Gaps = 39/416 (9%)
Query: 151 QVFDQMRVHNLMPHLHACTVLLNSLA-KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHA 209
++FD M L P + LL A K L +M + MV+ G+ + +++++LI A
Sbjct: 322 KIFDSMTKRGLKPEITTYGTLLQGYATKGALVEM-HGLLDLMVRNGIHPDHYVFSILICA 380
Query: 210 CCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPD 269
K VD+ + +M + + + TY +I + CK G +A+ ++M EG+SP
Sbjct: 381 YAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPG 440
Query: 270 IVTYNSLIHGFC-----------------------------------REGRMREARRLFR 294
+ YNSLIHG C +EGR+ E+ +LF
Sbjct: 441 NIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFE 500
Query: 295 DIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEG 352
+ G PN +TY TLI+GYC A ++EA++L M + G+ P VTY++++ CK
Sbjct: 501 LMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKIS 560
Query: 353 RIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYK 412
R+ DA L EM ++PD +T N ++ + TA+A ++ R+ E+G ++ TY
Sbjct: 561 RMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYN 620
Query: 413 ALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSR 472
++HG CK K D A ++ + +++ ++D + L F S
Sbjct: 621 IILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSN 680
Query: 473 GLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGE 528
GL + YR + + ++ +LF M+ NG DS + + + GE
Sbjct: 681 GLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGE 736
Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 132/322 (40%), Gaps = 42/322 (13%)
Query: 254 ALAVQDRMEREG---ISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTT 308
A++ +RM R G ++PD+ TY LI CR GR+ ++ KG + + +T
Sbjct: 68 AVSRYNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTP 127
Query: 309 LIDGYC---RANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMN 365
L+ G C R +D + + R M G P V +YN +L+ LC E R ++A LL+ M
Sbjct: 128 LLKGLCADKRTSDAMDIVLRR--MTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMA 185
Query: 366 EKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMD 425
+ + G D +Y +I+GF K + D
Sbjct: 186 DDR--------------------------------GGGSPPDVVSYTTVINGFFKEGDSD 213
Query: 426 IAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALI 485
A MLD G P +Y+ ++ C + +++L+ V G+ D Y +++
Sbjct: 214 KAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSIL 273
Query: 486 RRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLM 545
+C + A M+ +G+ D V Y+ L + G I D M +R L
Sbjct: 274 HGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLK 333
Query: 546 ITLKIYRSFSASYAKDNEILDL 567
+ Y + YA ++++
Sbjct: 334 PEITTYGTLLQGYATKGALVEM 355
Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 104/268 (38%), Gaps = 72/268 (26%)
Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
K+++ MV++GV N+ YN LI+ C + +D+ KLL M ++ + TY+TLI Y
Sbjct: 497 KLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGY 556
Query: 246 CKKGMHYEALAVQDRMEREGISPDIVT--------------------------------- 272
CK +AL + ME G+SPDI+T
Sbjct: 557 CKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIEL 616
Query: 273 --YNSLIHGFCRE-----------------------------------GRMREARRLFRD 295
YN ++HG C+ GR EA+ LF
Sbjct: 617 STYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVA 676
Query: 296 IK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGR 353
G PN+ TY + + LEE +L M G N I+R+L + G
Sbjct: 677 FSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGE 736
Query: 354 IRDANRLLNEMNEKKIAPDNVTCNTLIN 381
I A L+ ++EK + + T + I+
Sbjct: 737 ITRAGTYLSMIDEKHFSLEASTASLFID 764
>sp|Q9SZ10|PP338_ARATH Pentatricopeptide repeat-containing protein At4g26680,
mitochondrial OS=Arabidopsis thaliana GN=At4g26680 PE=2
SV=1
Length = 521
Score = 188 bits (478), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 137/507 (27%), Positives = 232/507 (45%), Gaps = 44/507 (8%)
Query: 10 DTKFIKTISAIMLKGHWAKLLNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAES 69
D F+ + +++ W KL ++ L S + VLL + LS FF WA++
Sbjct: 53 DLDFVNVAHSHLIQSDWDKL--NKLSDHLDSFRVKNVLLKIQKDY---LLSLEFFNWAKT 107
Query: 70 AVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPS-VLNALVKIHDDPDG 128
P HSL++H ++H LTKN+ FKSA+++L + + + P+ V +AL+ + + D
Sbjct: 108 RNPG-SHSLETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFDALLYSYRECDS 166
Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVY 188
V L +A+LK ++ F QM+ + +P + +C ++SL D+ + Y
Sbjct: 167 TPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFY 226
Query: 189 KKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKK 248
++M + CK + + +T N +++ YC+
Sbjct: 227 REMRR-----------------CK------------------ISPNPYTLNMVMSGYCRS 251
Query: 249 GMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRL--FRDIKGATPNHVTY 306
G + + + MER G V+YN+LI G C +G + A +L G PN VT+
Sbjct: 252 GKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTF 311
Query: 307 TTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNE 366
TLI G+CRA L+EA ++ M A V P VTYN+++ ++G A R +M
Sbjct: 312 NTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVC 371
Query: 367 KKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDI 426
I D +T N LI CK T A + + + L+ + T+ ALI G C K D
Sbjct: 372 NGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADR 431
Query: 427 AKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIR 486
EL M+ +G P+ +++ LV +C + + ++L E V R + +D +
Sbjct: 432 GFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCN 491
Query: 487 RFCKKEKVDYAQRLFNLMQGNGILGDS 513
+ K ++L M+G L +S
Sbjct: 492 GLKHQGKDQLVKKLLQEMEGKKFLQES 518
Score = 46.6 bits (109), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 87/204 (42%), Gaps = 4/204 (1%)
Query: 377 NTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLD 436
++L + + +A +M + G + + A + +DIA M
Sbjct: 172 DSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRR 231
Query: 437 AGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGL-CVDVSVYRALIRRFCKKEKVD 495
SP+ + + ++ GYC + ++LL + G DVS Y LI C+K +
Sbjct: 232 CKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVS-YNTLIAGHCEKGLLS 290
Query: 496 YAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFS 555
A +L N+M +G+ + V + +L + + RA + + S + +M + Y +
Sbjct: 291 SALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLI 350
Query: 556 ASYAK--DNEILDLFWSHVVDRGL 577
Y++ D+E+ F+ +V G+
Sbjct: 351 NGYSQQGDHEMAFRFYEDMVCNGI 374
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 186 bits (473), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 117/353 (33%), Positives = 179/353 (50%), Gaps = 3/353 (0%)
Query: 177 KDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLF 236
+D D ++ MV+ +I ++ L+ A K + D V L +M+ + +L+
Sbjct: 52 QDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLY 111
Query: 237 TYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI 296
TY+ I +C++ ALA+ +M + G P IVT NSL++GFC R+ EA L +
Sbjct: 112 TYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 171
Query: 297 --KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRI 354
G P+ VT+TTL+ G + N EA+ L E M KG P +VTY +++ LCK G
Sbjct: 172 VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP 231
Query: 355 RDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKAL 414
A LLN+M + KI D V NT+I+ CK A + N+M G+ D FTY L
Sbjct: 232 DLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPL 291
Query: 415 IHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGL 474
I C A LL ML+ +P ++ L+D + + KL DE V
Sbjct: 292 ISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKH 351
Query: 475 CV-DVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRA 526
C DV Y LI+ FCK ++V+ +F M G++G++V YT+L + +++A
Sbjct: 352 CFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQA 404
Score = 186 bits (471), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 119/403 (29%), Positives = 193/403 (47%), Gaps = 5/403 (1%)
Query: 129 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLA-KDRLTDMVWKV 187
N + S + ++ L + +M P + LLN +R+++ V V
Sbjct: 109 NLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALV 168
Query: 188 YKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCK 247
+MV++G + + L+H + + + L+ M K + DL TY +I CK
Sbjct: 169 -DQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCK 227
Query: 248 KGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFR--DIKGATPNHVT 305
+G AL + ++ME+ I D+V YN++I G C+ M +A LF + KG P+ T
Sbjct: 228 RGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFT 287
Query: 306 YTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEM- 364
Y LI C +A RL M K + P +V +N+++ KEG++ +A +L +EM
Sbjct: 288 YNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMV 347
Query: 365 NEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEM 424
K PD V NTLI +CK M+V M + GL+ + TY LIHGF +A++
Sbjct: 348 KSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDC 407
Query: 425 DIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRAL 484
D A+ + M+ G P +Y+ L+DG CN N E L + + R + +D+ Y +
Sbjct: 408 DNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTM 467
Query: 485 IRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAG 527
I CK KV+ LF + G+ + V YT++ + R G
Sbjct: 468 IEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKG 510
Score = 172 bits (437), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 110/396 (27%), Positives = 190/396 (47%), Gaps = 3/396 (0%)
Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVL 206
+ + + DQM P T L++ L + + ++MV G ++ Y +
Sbjct: 162 SEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAV 221
Query: 207 IHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGI 266
I+ CK + D LL +ME + AD+ YNT+I CK +A + ++ME +GI
Sbjct: 222 INGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGI 281
Query: 267 SPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALR 324
PD+ TYN LI C GR +A RL D+ K P+ V + LID + + L EA +
Sbjct: 282 KPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEK 341
Query: 325 L-REVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
L E++ +K +P VV YN++++ CK R+ + + EM+++ + + VT TLI+ +
Sbjct: 342 LYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGF 401
Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY 443
+ D +A V +M+ G+ D TY L+ G C ++ A + M
Sbjct: 402 FQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDI 461
Query: 444 CSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNL 503
+Y+ +++ C E L +G+ +V Y ++ FC+K + A LF
Sbjct: 462 VTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVE 521
Query: 504 MQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 539
M+ +G L +S Y +L A R G+ A ++++ +M
Sbjct: 522 MKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEM 557
Score = 170 bits (431), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 106/406 (26%), Positives = 194/406 (47%), Gaps = 5/406 (1%)
Query: 114 SVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN 173
++++ +V++ PD + +F N + + + ++M V P L ++N
Sbjct: 166 ALVDQMVEMGYQPDTVTFTTLVHGLFQHN--KASEAVALVERMVVKGCQPDLVTYGAVIN 223
Query: 174 SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRA 233
L K D+ + KM + + A++ +YN +I CK +D L +ME K ++
Sbjct: 224 GLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKP 283
Query: 234 DLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF 293
D+FTYN LI+ C G +A + M + I+PD+V +N+LI F +EG++ EA +L+
Sbjct: 284 DVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLY 343
Query: 294 RDI---KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCK 350
++ K P+ V Y TLI G+C+ +EE + + M+ +G+ VTY +++ +
Sbjct: 344 DEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQ 403
Query: 351 EGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFT 410
+A + +M + PD +T N L++ C G+ +A+ V M + + LD T
Sbjct: 404 ARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVT 463
Query: 411 YKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFV 470
Y +I CKA +++ +L + G P+ +Y+ ++ G+C K +E L E
Sbjct: 464 YTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMK 523
Query: 471 SRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIY 516
G + Y LIR + + L M+ G GD+ +
Sbjct: 524 EDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTF 569
Score = 161 bits (408), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 118/442 (26%), Positives = 204/442 (46%), Gaps = 30/442 (6%)
Query: 47 LLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIAL 106
LLN + CH +S A + Y+ + T++H L ++ A ++E++ +
Sbjct: 151 LLNGF--CHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVV 208
Query: 107 R----DFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLM 162
+ D ++ +V+N L K +PD L + ++M +
Sbjct: 209 KGCQPDLVTYGAVINGLCK-RGEPD--------------------LALNLLNKMEKGKIE 247
Query: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKL 222
+ +++ L K + D + ++ KM G+ ++ YN LI C +L
Sbjct: 248 ADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRL 307
Query: 223 LCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRM-EREGISPDIVTYNSLIHGFC 281
L +M K++ DL +N LI + K+G EA + D M + + PD+V YN+LI GFC
Sbjct: 308 LSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFC 367
Query: 282 REGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVV 339
+ R+ E +FR++ +G N VTYTTLI G+ +A D + A + + M + GV+P ++
Sbjct: 368 KYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIM 427
Query: 340 TYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRM 399
TYN +L LC G + A + M ++ + D VT T+I A CK G + +
Sbjct: 428 TYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSL 487
Query: 400 LEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNE 459
G+ + TY ++ GFC+ + A L M + G P+ +Y+ L+ +E
Sbjct: 488 SLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDE 547
Query: 460 EALLKLLDEFVSRGLCVDVSVY 481
A +L+ E S G D S +
Sbjct: 548 AASAELIKEMRSCGFAGDASTF 569
Score = 117 bits (292), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 134/293 (45%), Gaps = 2/293 (0%)
Query: 253 EALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLI 310
+A+ + M + P IV ++ L+ + + L ++ G + N TY+ I
Sbjct: 58 DAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFI 117
Query: 311 DGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIA 370
+ +CR + L AL + M G P +VT NS+L C RI +A L+++M E
Sbjct: 118 NYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQ 177
Query: 371 PDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKEL 430
PD VT TL++ + + A+ + RM+ G D TY A+I+G CK E D+A L
Sbjct: 178 PDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNL 237
Query: 431 LFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCK 490
L M Y+ ++DG C + + L ++ ++G+ DV Y LI C
Sbjct: 238 LNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCN 297
Query: 491 KEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRR 543
+ A RL + M I D V + +L A+ + G+ + D+M + +
Sbjct: 298 YGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSK 350
Score = 112 bits (280), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 143/309 (46%), Gaps = 4/309 (1%)
Query: 285 RMREARRLFRDIKGATP--NHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYN 342
++ +A LF D+ + P + V ++ L+ + N + + L E M G+ + TY+
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 343 SILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEA 402
+ C+ ++ A +L +M + P VT N+L+N +C + A+ + ++M+E
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 403 GLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEAL 462
G D T+ L+HG + + A L+ M+ G P +Y +++G C + +
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234
Query: 463 LKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYA 522
L LL++ + DV +Y +I CK + +D A LFN M+ GI D Y L
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISC 294
Query: 523 YWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHI 582
G S +L DM + + L + + ++ K+ ++++ + D + SKH
Sbjct: 295 LCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVE--AEKLYDEMVKSKHC 352
Query: 583 FKEMQLRNS 591
F ++ N+
Sbjct: 353 FPDVVAYNT 361
Score = 79.3 bits (194), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 102/223 (45%)
Query: 346 RKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLM 405
RK+ ++ ++ DA L +M + + P V + L++A K+ + + +M G+
Sbjct: 48 RKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGIS 107
Query: 406 LDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKL 465
+ +TY I+ FC+ ++ +A +L M+ G+ PS + + L++G+C+ N + L
Sbjct: 108 HNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVAL 167
Query: 466 LDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWR 525
+D+ V G D + L+ + K A L M G D V Y ++ +
Sbjct: 168 VDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCK 227
Query: 526 AGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLF 568
GEP ++L+ M + ++ + IY + K + D F
Sbjct: 228 RGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAF 270
>sp|P0C8Q3|PP326_ARATH Pentatricopeptide repeat-containing protein At4g19890
OS=Arabidopsis thaliana GN=At4g19890 PE=2 SV=1
Length = 701
Score = 185 bits (470), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 122/427 (28%), Positives = 205/427 (48%), Gaps = 5/427 (1%)
Query: 126 PDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVW 185
PD +S+ L +VI Q+ + M +P CT++L +L ++ L +
Sbjct: 215 PDSSSYKL--MVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAI 272
Query: 186 KVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALY 245
++KM+ LG N+ + LI CK + + ++L EM + +++T+ LI
Sbjct: 273 WYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGL 332
Query: 246 CKKGMHYEALAVQDRMER-EGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPN 302
CK+G +A + ++ R + P++ TY S+I G+C+E ++ A LF +K G PN
Sbjct: 333 CKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPN 392
Query: 303 HVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLN 362
TYTTLI+G+C+A A L +M +G P + TYN+ + LCK+ R +A LLN
Sbjct: 393 VNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLN 452
Query: 363 EMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAK 422
+ + D VT LI CK D A+ RM + G D LI FC+ K
Sbjct: 453 KAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQK 512
Query: 423 EMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYR 482
+M ++ L ++ G P+ +Y+ ++ YC + + + LK G D Y
Sbjct: 513 KMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYG 572
Query: 483 ALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRR 542
+LI CKK VD A +L+ M G+ V +LAY Y + + +L+ + ++
Sbjct: 573 SLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLDKK 632
Query: 543 RLMITLK 549
+ T++
Sbjct: 633 LWIRTVR 639
Score = 169 bits (428), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 108/398 (27%), Positives = 189/398 (47%), Gaps = 6/398 (1%)
Query: 147 QDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVV-ANIHLYNV 205
+ ++ ++M + P+++ T L++ L K T+ ++++ K+V+ N+H Y
Sbjct: 304 KQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTS 363
Query: 206 LIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREG 265
+I CK +++ E L M+ + + ++ TY TLI +CK G A + + M EG
Sbjct: 364 MIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEG 423
Query: 266 ISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEAL 323
P+I TYN+ I C++ R EA L G + VTYT LI C+ ND+ +AL
Sbjct: 424 FMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQAL 483
Query: 324 RLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAY 383
M G + N ++ C++ +++++ RL + + P T ++I+ Y
Sbjct: 484 AFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCY 543
Query: 384 CKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSY 443
CK GD A+K + M G + D FTY +LI G CK +D A +L M+D G SP
Sbjct: 544 CKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPE 603
Query: 444 CSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNL 503
+ L YC +N+ + LL+ + + + R L+R+ C ++KV A F
Sbjct: 604 VTRVTLAYEYCKRNDSANAMILLEPLDKK---LWIRTVRTLVRKLCSEKKVGVAALFFQK 660
Query: 504 MQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 541
+ D V + A +G+ +D+ + + R
Sbjct: 661 LLEKDSSADRVTLAAFTTACSESGKNNLVTDLTERISR 698
Score = 166 bits (419), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 112/432 (25%), Positives = 193/432 (44%), Gaps = 5/432 (1%)
Query: 156 MRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSD 215
M+ L P +L + L + V+ +M GVV + Y +++ C +
Sbjct: 173 MQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGK 232
Query: 216 VDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNS 275
+ + ++ L M + D T ++ C+ G+ A+ +M G P+++ + S
Sbjct: 233 IQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTS 292
Query: 276 LIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKG 333
LI G C++G +++A + ++ G PN T+T LIDG C+ E+A RL +
Sbjct: 293 LIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSD 352
Query: 334 VY-PGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASA 392
Y P V TY S++ CKE ++ A L + M E+ + P+ T TLIN +CK G A
Sbjct: 353 TYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRA 412
Query: 393 MKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDG 452
++ N M + G M + +TY A I CK A ELL G +Y+ L+
Sbjct: 413 YELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQE 472
Query: 453 YCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGD 512
C +N+ L G D+ + LI FC+++K+ ++RLF L+ G++
Sbjct: 473 QCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPT 532
Query: 513 SVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDL--FWS 570
YTS+ Y + G+ +M R + Y S + K + + + +
Sbjct: 533 KETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYE 592
Query: 571 HVVDRGLMSKHI 582
++DRGL +
Sbjct: 593 AMIDRGLSPPEV 604
Score = 141 bits (356), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 113/401 (28%), Positives = 177/401 (44%), Gaps = 5/401 (1%)
Query: 179 RLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTY 238
RL + V V M G+ + N ++ + ++ E + EM + V D +Y
Sbjct: 162 RLNEAVGMVMD-MQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSY 220
Query: 239 NTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI-- 296
++ + G EA M + G PD T ++ C G + A FR +
Sbjct: 221 KLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMID 280
Query: 297 KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRD 356
G PN + +T+LIDG C+ +++A + E M G P V T+ +++ LCK G
Sbjct: 281 LGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEK 340
Query: 357 ANRLLNEMNEKKIAPDNV-TCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALI 415
A RL ++ NV T ++I YCK A + +RM E GL + TY LI
Sbjct: 341 AFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLI 400
Query: 416 HGFCKAKEMDIAKELLFGMLDAGFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLC 475
+G CKA A EL+ M D GF P+ +Y+ +D C K+ +LL++ S GL
Sbjct: 401 NGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLE 460
Query: 476 VDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDI 535
D Y LI+ CK+ ++ A F M G D + L A+ R + K +
Sbjct: 461 ADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERL 520
Query: 536 LDDMYRRRLMITLKIYRSFSASYAKDNEI-LDLFWSHVVDR 575
+ L+ T + Y S + Y K+ +I L L + H + R
Sbjct: 521 FQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKR 561
Score = 87.4 bits (215), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 123/287 (42%), Gaps = 36/287 (12%)
Query: 303 HVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLN 362
H ++ + L EA+ + M +G+ P +T N +L + G I A + +
Sbjct: 147 HEVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFD 206
Query: 363 EMNEKKIA-----------------------------------PDNVTCNTLINAYCKIG 387
EM+ + + PDN TC ++ A C+ G
Sbjct: 207 EMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENG 266
Query: 388 DTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDAGFSPSYCSYS 447
A+ +M++ G + + +LI G CK + A E+L M+ G+ P+ +++
Sbjct: 267 LVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHT 326
Query: 448 WLVDGYCNKNNEEALLKLLDEFV-SRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQG 506
L+DG C + E +L + V S +V Y ++I +CK++K++ A+ LF+ M+
Sbjct: 327 ALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKE 386
Query: 507 NGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRS 553
G+ + YT+L + +AG ++++ M M + Y +
Sbjct: 387 QGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNA 433
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/277 (20%), Positives = 114/277 (41%), Gaps = 46/277 (16%)
Query: 344 ILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAG 403
+LR + GR+ +A ++ +M + + P ++T N ++ ++G A V + M G
Sbjct: 153 MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 212
Query: 404 LMLDQFTYKALIHGFCKAKEMDIAKELLFGMLDA-------------------------- 437
++ D +YK ++ G + ++ A L GM+
Sbjct: 213 VVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAI 272
Query: 438 ---------GFSPSYCSYSWLVDGYCNKNNEEALLKLLDEFVSRGLCVDVSVYRALIRRF 488
GF P+ +++ L+DG C K + + ++L+E V G +V + ALI
Sbjct: 273 WYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGL 332
Query: 489 CKKEKVDYAQRLF-NLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMIT 547
CK+ + A RLF L++ + + YTS+ Y + + + M + L
Sbjct: 333 CKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPN 392
Query: 548 LKIYRSF------SASYAKDNEILDLFWSHVVDRGLM 578
+ Y + + S+ + E+++L D G M
Sbjct: 393 VNTYTTLINGHCKAGSFGRAYELMNLMG----DEGFM 425
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.136 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 212,199,603
Number of Sequences: 539616
Number of extensions: 8728310
Number of successful extensions: 37022
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 403
Number of HSP's successfully gapped in prelim test: 96
Number of HSP's that attempted gapping in prelim test: 26049
Number of HSP's gapped (non-prelim): 2954
length of query: 591
length of database: 191,569,459
effective HSP length: 123
effective length of query: 468
effective length of database: 125,196,691
effective search space: 58592051388
effective search space used: 58592051388
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 64 (29.3 bits)