BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048534
(91 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9CA64|BH135_ARATH Transcription factor bHLH135 OS=Arabidopsis thaliana GN=BHLH135
PE=1 SV=1
Length = 93
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 62/77 (80%), Positives = 72/77 (93%), Gaps = 1/77 (1%)
Query: 16 ITDDQINDLVSKLQQLLPELRNNR-SDKVSAGKVLQETCNYIRSLHREVDDLSERLSELL 74
I++DQINDL+ KLQQLLPELR++R SDKVSA +VLQ+TCNYIR+LHREVDDLSERLSELL
Sbjct: 17 ISEDQINDLIIKLQQLLPELRDSRRSDKVSAARVLQDTCNYIRNLHREVDDLSERLSELL 76
Query: 75 ATTDTAQAAIIRSLLMQ 91
A +DTAQAA+IRSLL Q
Sbjct: 77 ANSDTAQAALIRSLLTQ 93
>sp|Q15853|USF2_HUMAN Upstream stimulatory factor 2 OS=Homo sapiens GN=USF2 PE=2 SV=1
Length = 346
Score = 36.2 bits (82), Expect = 0.057, Method: Composition-based stats.
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 5 RSRSRQSGSSRITDDQINDLVSKLQQLLPELR-NNRSDKVSAGKVLQETCNYIRSLHREV 63
R R++ + R D+IN+ + +L +++P+ +N S G +L + C+YIR L +
Sbjct: 235 RRRAQHNEVERRRRDKINNWIVQLSKIIPDCNADNSKTGASKGGILSKACDYIRELRQTN 294
Query: 64 DDLSERLSE 72
+ E E
Sbjct: 295 QRMQETFKE 303
>sp|Q63665|USF2_RAT Upstream stimulatory factor 2 OS=Rattus norvegicus GN=Usf2 PE=1
SV=2
Length = 346
Score = 36.2 bits (82), Expect = 0.064, Method: Composition-based stats.
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 5 RSRSRQSGSSRITDDQINDLVSKLQQLLPELR-NNRSDKVSAGKVLQETCNYIRSLHREV 63
R R++ + R D+IN+ + +L +++P+ +N S G +L + C+YIR L +
Sbjct: 235 RRRAQHNEVERRRRDKINNWIVQLSKIIPDCHADNSKTGASKGGILSKACDYIRELRQTN 294
Query: 64 DDLSERLSE 72
+ E E
Sbjct: 295 QRMQETFKE 303
>sp|Q64705|USF2_MOUSE Upstream stimulatory factor 2 OS=Mus musculus GN=Usf2 PE=1 SV=1
Length = 346
Score = 36.2 bits (82), Expect = 0.064, Method: Composition-based stats.
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 5 RSRSRQSGSSRITDDQINDLVSKLQQLLPELR-NNRSDKVSAGKVLQETCNYIRSLHREV 63
R R++ + R D+IN+ + +L +++P+ +N S G +L + C+YIR L +
Sbjct: 235 RRRAQHNEVERRRRDKINNWIVQLSKIIPDCHADNSKTGASKGGILSKACDYIRELRQTN 294
Query: 64 DDLSERLSE 72
+ E E
Sbjct: 295 QRMQETFKE 303
>sp|P20067|ID1_MOUSE DNA-binding protein inhibitor ID-1 OS=Mus musculus GN=Id1 PE=1 SV=3
Length = 168
Score = 35.8 bits (81), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 21 INDLVSKLQQLLPELRNNRSDKVSAGKVLQETCNYIRSLHREVDDLSE 68
+N S+L++L+P L NR KVS ++LQ +YIR L E++ SE
Sbjct: 62 MNGCYSRLKELVPTLPQNR--KVSKVEILQHVIDYIRDLQLELNSESE 107
>sp|P41135|ID1_RAT DNA-binding protein inhibitor ID-1 OS=Rattus norvegicus GN=Id1 PE=1
SV=1
Length = 164
Score = 35.8 bits (81), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 21 INDLVSKLQQLLPELRNNRSDKVSAGKVLQETCNYIRSLHREVDDLSE 68
+N S+L++L+P L NR KVS ++LQ +YIR L E++ SE
Sbjct: 62 MNGCYSRLKELVPTLPQNR--KVSKVEILQHVIDYIRDLQLELNSESE 107
>sp|P41134|ID1_HUMAN DNA-binding protein inhibitor ID-1 OS=Homo sapiens GN=ID1 PE=1 SV=3
Length = 155
Score = 35.8 bits (81), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 21 INDLVSKLQQLLPELRNNRSDKVSAGKVLQETCNYIRSLHREVDDLSE 68
+N S+L++L+P L NR KVS ++LQ +YIR L E++ SE
Sbjct: 69 MNGCYSRLKELVPTLPQNR--KVSKVEILQHVIDYIRDLQLELNSESE 114
>sp|Q6XBT4|USF1_BOVIN Upstream stimulatory factor 1 OS=Bos taurus GN=USF1 PE=2 SV=1
Length = 310
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 19 DQINDLVSKLQQLLPE--LRNNRSDKVSAGKVLQETCNYIRSLHREVDDLSERLSEL 73
D+IN+ + +L +++P+ + + +S + S G +L + C+YI+ L + LSE L L
Sbjct: 213 DKINNWIVQLSKIIPDCSMESTKSGQ-SKGGILSKACDYIQELRQSNHRLSEELQGL 268
>sp|O02818|USF1_RABIT Upstream stimulatory factor 1 OS=Oryctolagus cuniculus GN=USF1 PE=2
SV=1
Length = 310
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 19 DQINDLVSKLQQLLPE--LRNNRSDKVSAGKVLQETCNYIRSLHREVDDLSERLSEL 73
D+IN+ + +L +++P+ + + +S + S G +L + C+YI+ L + LSE L L
Sbjct: 213 DKINNWIVQLSKIIPDCSMESTKSGQ-SKGGILSKACDYIQELRQSNHRLSEELQGL 268
>sp|P22415|USF1_HUMAN Upstream stimulatory factor 1 OS=Homo sapiens GN=USF1 PE=1 SV=1
Length = 310
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 19 DQINDLVSKLQQLLPE--LRNNRSDKVSAGKVLQETCNYIRSLHREVDDLSERLSEL 73
D+IN+ + +L +++P+ + + +S + S G +L + C+YI+ L + LSE L L
Sbjct: 213 DKINNWIVQLSKIIPDCSMESTKSGQ-SKGGILSKACDYIQELRQSNHRLSEELQGL 268
>sp|Q61069|USF1_MOUSE Upstream stimulatory factor 1 OS=Mus musculus GN=Usf1 PE=2 SV=1
Length = 310
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 19 DQINDLVSKLQQLLPE--LRNNRSDKVSAGKVLQETCNYIRSLHREVDDLSERLSEL 73
D+IN+ + +L +++P+ + + +S + S G +L + C+YI+ L + LSE L L
Sbjct: 213 DKINNWIVQLSKIIPDCSMESTKSGQ-SKGGILSKACDYIQELRQSNHRLSEELQGL 268
>sp|Q07956|USF_STRPU Upstream stimulatory factor OS=Strongylocentrotus purpuratus PE=2
SV=1
Length = 265
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 19 DQINDLVSKLQQLLPELRNNRSDKV-SAGKVLQETCNYIRSL 59
D+IN+ + KL +++P+ + S + S G +L +TC+YI L
Sbjct: 204 DKINNWIVKLSKIIPDCNIDHSKQGQSKGGILTKTCDYIHDL 245
>sp|Q6PBD7|ID2_XENTR DNA-binding protein inhibitor ID-2 OS=Xenopus tropicalis GN=id2
PE=2 SV=1
Length = 132
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 21 INDLVSKLQQLLPELRNNRSDKVSAGKVLQETCNYIRSLHREVD 64
+ND SKL++L+P + N+ KVS ++LQ +YI L +D
Sbjct: 39 MNDCYSKLKELVPSIPQNK--KVSKMEILQHVIDYILDLQLALD 80
>sp|Q9PWJ5|ID2A_XENLA DNA-binding protein inhibitor ID-2-A OS=Xenopus laevis GN=id2-a
PE=2 SV=1
Length = 133
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 21 INDLVSKLQQLLPELRNNRSDKVSAGKVLQETCNYIRSLHREVD 64
+ND SKL++L+P + N+ KVS ++LQ +YI L +D
Sbjct: 39 MNDCYSKLKELVPSIPQNK--KVSKMEILQHVIDYILDLQLTLD 80
>sp|Q2VIU1|ID2_PIG DNA-binding protein inhibitor ID-2 OS=Sus scrofa GN=ID2 PE=2 SV=1
Length = 134
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 21 INDLVSKLQQLLPELRNNRSDKVSAGKVLQETCNYIRSLHREVD 64
+ND SKL++L+P + N+ KVS ++LQ +YI L +D
Sbjct: 39 MNDCYSKLKELVPSIPQNK--KVSKMEILQHVIDYILDLQIALD 80
>sp|Q95187|IFNT_GIRCA Interferon tau OS=Giraffa camelopardalis GN=IFNT PE=3 SV=1
Length = 195
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 31/76 (40%), Gaps = 3/76 (3%)
Query: 7 RSRQSGSSRITDDQINDLVSKLQQLLPELRNNRSDKVSAGKVLQETCNYIRSLHREVDDL 66
R GS D I+ L LQQ RS +L++ C LH+++DDL
Sbjct: 63 RKMVEGSQLQKDQAISVLHEMLQQCFNLFHTERSSAAWDNTLLEQLCT---GLHQQLDDL 119
Query: 67 SERLSELLATTDTAQA 82
RL L+ D+
Sbjct: 120 DARLGPLMGQKDSGMG 135
>sp|Q66J78|ID2B_XENLA DNA-binding protein inhibitor ID-2-B OS=Xenopus laevis GN=id2-b
PE=2 SV=1
Length = 135
Score = 33.1 bits (74), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 21 INDLVSKLQQLLPELRNNRSDKVSAGKVLQETCNYIRSLHREVD 64
+ND SKL++L+P + N+ KVS ++LQ +YI L +D
Sbjct: 39 MNDCYSKLKELVPSIPPNK--KVSKMEILQHVIDYILDLQLTLD 80
>sp|Q3ZC46|ID2_BOVIN DNA-binding protein inhibitor ID-2 OS=Bos taurus GN=ID2 PE=2 SV=1
Length = 134
Score = 33.1 bits (74), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 21 INDLVSKLQQLLPELRNNRSDKVSAGKVLQETCNYIRSLHREVD 64
+ND SKL++L+P + N+ KVS ++LQ +YI L +D
Sbjct: 39 MNDCYSKLKELVPSIPQNK--KVSKMEILQHVIDYILDLQIALD 80
>sp|Q5RCH7|ID2_PONAB DNA-binding protein inhibitor ID-2 OS=Pongo abelii GN=ID2 PE=2
SV=1
Length = 134
Score = 33.1 bits (74), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 21 INDLVSKLQQLLPELRNNRSDKVSAGKVLQETCNYIRSLHREVD 64
+ND SKL++L+P + N+ KVS ++LQ +YI L +D
Sbjct: 39 MNDCYSKLKELVPSIPQNK--KVSKMEILQHVIDYILDLQIALD 80
>sp|Q4R5J7|ID2_MACFA DNA-binding protein inhibitor ID-2 OS=Macaca fascicularis GN=ID2
PE=2 SV=1
Length = 134
Score = 33.1 bits (74), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 21 INDLVSKLQQLLPELRNNRSDKVSAGKVLQETCNYIRSLHREVD 64
+ND SKL++L+P + N+ KVS ++LQ +YI L +D
Sbjct: 39 MNDCYSKLKELVPSIPQNK--KVSKMEILQHVIDYILDLQIALD 80
>sp|Q02363|ID2_HUMAN DNA-binding protein inhibitor ID-2 OS=Homo sapiens GN=ID2 PE=1
SV=1
Length = 134
Score = 33.1 bits (74), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 21 INDLVSKLQQLLPELRNNRSDKVSAGKVLQETCNYIRSLHREVD 64
+ND SKL++L+P + N+ KVS ++LQ +YI L +D
Sbjct: 39 MNDCYSKLKELVPSIPQNK--KVSKMEILQHVIDYILDLQIALD 80
>sp|Q9M0R0|BH081_ARATH Transcription factor bHLH81 OS=Arabidopsis thaliana GN=BHLH81 PE=2
SV=1
Length = 262
Score = 33.1 bits (74), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Query: 13 SSRITDDQINDLVSKLQQLLPELRNNRSDKVSAGKVLQETCNYIRSLHREVDDLSE 68
+ R+ +I+D + KLQ+L+P N + + +L+E Y++ L R++ +L+E
Sbjct: 198 AERVRRTRISDRIRKLQELVP----NMDKQTNTADMLEEAVEYVKVLQRQIQELTE 249
>sp|Q8GZM7|PIF1_ARATH Transcription factor PIF1 OS=Arabidopsis thaliana GN=PIF1 PE=1 SV=1
Length = 478
Score = 32.7 bits (73), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 41/68 (60%), Gaps = 7/68 (10%)
Query: 2 SSRRSRSRQSG--SSRITDDQINDLVSKLQQLLPELRNNRSDKVSAGKVLQETCNYIRSL 59
S++RSR+ + S R D+IN+ + LQ+L+P R N+SDK S +L E Y++SL
Sbjct: 279 STKRSRAAEVHNLSERKRRDRINERMKALQELIP--RCNKSDKAS---MLDEAIEYMKSL 333
Query: 60 HREVDDLS 67
++ +S
Sbjct: 334 QLQIQMMS 341
>sp|P41136|ID2_MOUSE DNA-binding protein inhibitor ID-2 OS=Mus musculus GN=Id2 PE=1
SV=3
Length = 134
Score = 32.3 bits (72), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 21 INDLVSKLQQLLPELRNNRSDKVSAGKVLQETCNYIRSLHREVD 64
+ND SKL++L+P + N+ KV+ ++LQ +YI L +D
Sbjct: 39 MNDCYSKLKELVPSIPQNK--KVTKMEILQHVIDYILDLQIALD 80
>sp|P41137|ID2_RAT DNA-binding protein inhibitor ID-2 OS=Rattus norvegicus GN=Id2
PE=1 SV=1
Length = 134
Score = 32.3 bits (72), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 21 INDLVSKLQQLLPELRNNRSDKVSAGKVLQETCNYIRSLHREVD 64
+ND SKL++L+P + N+ KV+ ++LQ +YI L +D
Sbjct: 39 MNDCYSKLKELVPSIPQNK--KVTKMEILQHVIDYILDLQIALD 80
>sp|Q07957|USF1_XENBO Upstream stimulatory factor 1 OS=Xenopus borealis GN=usf1 PE=2 SV=1
Length = 307
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 19 DQINDLVSKLQQLLPE--LRNNRSDKVSAGKVLQETCNYIRSLHREVDDLSERLSEL 73
D+IN+ + +L +++P+ + + ++ + S G +L + C+YI+ L + LSE L L
Sbjct: 210 DKINNWIVQLSKIIPDCSMESTKTGQ-SKGGILSKACDYIQELRQSNLRLSEELQNL 265
>sp|Q7TS99|HELT_MOUSE Hairy and enhancer of split-related protein HELT OS=Mus musculus
GN=Helt PE=1 SV=1
Length = 240
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
Query: 1 MSSR-RSRSRQSGSSRITD----DQINDLVSKLQQLLP-ELRNNRSDKVSAGKVLQETCN 54
MS R + R R S ++ + D+IN +++L + +P L S K+ ++L+ T
Sbjct: 1 MSDRLKERKRTPVSHKVIEKRRRDRINRCLNELGKTVPMALAKQSSGKLEKAEILEMTVQ 60
Query: 55 YIRSLHREVDDLSERLSELLA 75
Y+R+LH D R ELLA
Sbjct: 61 YLRALH-SADFPRGREKELLA 80
>sp|Q9FJL4|BH078_ARATH Transcription factor bHLH78 OS=Arabidopsis thaliana GN=BHLH78 PE=2
SV=1
Length = 498
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 37/61 (60%), Gaps = 8/61 (13%)
Query: 15 RITDDQINDLVSKLQQLLPELRNNRSDKVSAGK--VLQETCNYIRSLHREVDDLSERLSE 72
R+ ++I + + LQ L+P +KV+ GK +L E NY++SL R+V+ LS +LS
Sbjct: 317 RVRREKIGERMKLLQDLVPGC-----NKVT-GKALMLDEIINYVQSLQRQVEFLSMKLSS 370
Query: 73 L 73
+
Sbjct: 371 V 371
>sp|Q9D952|EVPL_MOUSE Envoplakin OS=Mus musculus GN=Evpl PE=2 SV=3
Length = 2035
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 48/86 (55%), Gaps = 10/86 (11%)
Query: 5 RSRSRQSGSSRITDDQINDLVSKLQQLLPELRNNRSDK--VSAGKVLQETCNYIRSLH-- 60
R++ +++GS + +Q ++++LLPEL R+ K V +V QE + ++
Sbjct: 1215 RAQLQETGSKKSGVEQ------EVEKLLPELEVLRAQKPVVEYKEVTQEVVRHEKNPEVL 1268
Query: 61 REVDDLSERLSELLATTDTAQAAIIR 86
RE+D L +L+EL+ T +Q +IR
Sbjct: 1269 REIDRLKAQLNELVNTNGRSQEQLIR 1294
>sp|Q9CAA9|BH049_ARATH Transcription factor bHLH49 OS=Arabidopsis thaliana GN=BHLH49 PE=2
SV=1
Length = 486
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%), Gaps = 8/79 (10%)
Query: 3 SRRSRSRQSGS--SRITDDQINDLVSKLQQLLPELRNNRSDKVSAGKV-LQETCNYIRSL 59
+RR ++ S S R+ ++I++ + LQ L+P +KV+ V L E NY++SL
Sbjct: 305 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGC-----NKVTGKAVMLDEIINYVQSL 359
Query: 60 HREVDDLSERLSELLATTD 78
R+V+ LS +L+ + D
Sbjct: 360 QRQVEFLSMKLATVNPQMD 378
>sp|Q9FE22|HFR1_ARATH Transcription factor HFR1 OS=Arabidopsis thaliana GN=HFR1 PE=1 SV=1
Length = 292
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 35/54 (64%), Gaps = 5/54 (9%)
Query: 6 SRSRQSGSSRITDDQINDLVSKLQQLLPELRNNRSDKVSAGKVLQETCNYIRSL 59
S +R+ R D+++++ + KLQQL+P +++DKVS VL +T Y+++L
Sbjct: 135 SVTRKGSKRRRRDEKMSNKMRKLQQLVPNC--HKTDKVS---VLDKTIEYMKNL 183
>sp|A0JP75|EFC4A_XENTR EF-hand calcium-binding domain-containing protein 4A OS=Xenopus
tropicalis GN=efcab4a PE=2 SV=1
Length = 256
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 8/61 (13%)
Query: 12 GSSRITDD--QINDLVSKLQQLLPELRNNRSDKVSAGKVLQETCNYIRSLHREVDDLSER 69
G+SRI + +I DL S+L++ PEL ++ + L +YIR +H E D L +
Sbjct: 150 GASRIFQEHKEIRDLWSRLRKERPELLSHFEE------FLYRVSSYIRDVHHEKDTLEQA 203
Query: 70 L 70
L
Sbjct: 204 L 204
>sp|Q9SRT2|BH062_ARATH Transcription factor bHLH62 OS=Arabidopsis thaliana GN=BHLH62 PE=2
SV=1
Length = 456
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 45/75 (60%), Gaps = 10/75 (13%)
Query: 3 SRRSRSRQSGS--SRITDDQINDLVSKLQQLLPELRNNRSDKVSAGK--VLQETCNYIRS 58
+RR ++ S S R+ ++I++ + LQ L+P +KV+ GK +L E NY++S
Sbjct: 260 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGC-----NKVT-GKALMLDEIINYVQS 313
Query: 59 LHREVDDLSERLSEL 73
L R+V+ LS +LS +
Sbjct: 314 LQRQVEFLSMKLSSV 328
>sp|Q9C8P8|BH080_ARATH Transcription factor bHLH80 OS=Arabidopsis thaliana GN=BHLH80 PE=1
SV=1
Length = 259
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 14/57 (24%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Query: 13 SSRITDDQINDLVSKLQQLLPELRNNRSDKVSAGKVLQETCNYIRSLHREVDDLSER 69
+ R+ +I+D + +LQ+L+P N + + +L+E Y+++L ++ +L+E+
Sbjct: 195 AERVRRTRISDRIRRLQELVP----NMDKQTNTADMLEEAVEYVKALQSQIQELTEQ 247
>sp|Q9LV17|BH079_ARATH Transcription factor bHLH79 OS=Arabidopsis thaliana GN=BHLH79 PE=2
SV=1
Length = 281
Score = 30.0 bits (66), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 9 RQSGSSRITDDQINDLVSKLQQLLPELRNNRSDKVSAGKVLQETCNYIRSLHREVDDLSE 68
R S + R ++I++ ++ LQ ++P + + VL E NYI+SL R+V+ LS
Sbjct: 163 RHSLAERARREKISEKMTALQDIIPGC----NKIIGKALVLDEIINYIQSLQRQVEFLSM 218
Query: 69 RL 70
+L
Sbjct: 219 KL 220
>sp|O80536|PIF3_ARATH Transcription factor PIF3 OS=Arabidopsis thaliana GN=PIF3 PE=1 SV=1
Length = 524
Score = 29.6 bits (65), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 7/69 (10%)
Query: 1 MSSRRSRSRQSG--SSRITDDQINDLVSKLQQLLPELRNNRSDKVSAGKVLQETCNYIRS 58
+ S+RSRS + S R D+IN+ + LQ+L+P N+ DK S +L E Y++S
Sbjct: 337 LGSKRSRSAEVHNLSERRRRDRINEKMRALQELIPNC--NKVDKAS---MLDEAIEYLKS 391
Query: 59 LHREVDDLS 67
L +V +S
Sbjct: 392 LQLQVQIMS 400
>sp|Q6NKN9|BH074_ARATH Transcription factor bHLH74 OS=Arabidopsis thaliana GN=BHLH74 PE=2
SV=1
Length = 366
Score = 29.6 bits (65), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 44/74 (59%), Gaps = 8/74 (10%)
Query: 1 MSSRRSRSRQSGS--SRITDDQINDLVSKLQQLLPELRNNRSDKVSAGKV-LQETCNYIR 57
M +RR ++ S S R+ ++I++ + LQ+L+P +K++ V L E NY++
Sbjct: 206 MRARRGQATNSHSLAERVRREKISERMRLLQELVPGC-----NKITGKAVMLDEIINYVQ 260
Query: 58 SLHREVDDLSERLS 71
SL ++V+ LS +L+
Sbjct: 261 SLQQQVEFLSMKLA 274
>sp|Q9DBX7|HEYL_MOUSE Hairy/enhancer-of-split related with YRPW motif-like protein
OS=Mus musculus GN=Heyl PE=1 SV=2
Length = 326
Score = 29.3 bits (64), Expect = 6.9, Method: Composition-based stats.
Identities = 15/43 (34%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Query: 19 DQINDLVSKLQQLLPE-LRNNRSDKVSAGKVLQETCNYIRSLH 60
D+IN +S+L++L+P S K+ +VLQ T ++++ LH
Sbjct: 57 DRINSSLSELRRLVPTAFEKQGSSKLEKAEVLQMTVDHLKMLH 99
>sp|Q0JXE7|BPE_ARATH Transcription factor BPE OS=Arabidopsis thaliana GN=BPE PE=2 SV=1
Length = 343
Score = 29.3 bits (64), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
Query: 19 DQINDLVSKLQQLLPELRNNRSDKVSAGKVLQETCNYIRSLHREVDDLSERL 70
++I++ + LQ L+P + + VL E NYI+SL R+V+ LS +L
Sbjct: 156 EKISERMKILQDLVPGC----NKVIGKALVLDEIINYIQSLQRQVEFLSMKL 203
>sp|Q9NQ87|HEYL_HUMAN Hairy/enhancer-of-split related with YRPW motif-like protein
OS=Homo sapiens GN=HEYL PE=2 SV=2
Length = 328
Score = 29.3 bits (64), Expect = 8.0, Method: Composition-based stats.
Identities = 15/43 (34%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Query: 19 DQINDLVSKLQQLLPE-LRNNRSDKVSAGKVLQETCNYIRSLH 60
D+IN +S+L++L+P S K+ +VLQ T ++++ LH
Sbjct: 57 DRINSSLSELRRLVPTAFEKQGSSKLEKAEVLQMTVDHLKMLH 99
>sp|Q92817|EVPL_HUMAN Envoplakin OS=Homo sapiens GN=EVPL PE=1 SV=3
Length = 2033
Score = 29.3 bits (64), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 18/88 (20%)
Query: 17 TDDQINDLVSKLQQ--------------LLPELRNNRSDK--VSAGKVLQETCNYIRSLH 60
T+ +I L +KLQ+ LLP+L R+ K V +V QE + RS
Sbjct: 1206 TEQEITRLKAKLQEMAGKRSGVEKEVEKLLPDLEVLRAQKPTVEYKEVTQEVVRHERSPE 1265
Query: 61 --REVDDLSERLSELLATTDTAQAAIIR 86
RE+D L +L+EL+ + +Q +IR
Sbjct: 1266 VLREIDRLKAQLNELVNSHGRSQEQLIR 1293
>sp|Q8VZ02|BH048_ARATH Transcription factor bHLH48 OS=Arabidopsis thaliana GN=BHLH48 PE=2
SV=1
Length = 327
Score = 29.3 bits (64), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 6/54 (11%)
Query: 19 DQINDLVSKLQQLLPELRNNRSDKVSAGK-VLQETCNYIRSLHREVDDLSERLS 71
++IN + LQ+L+P DK+ VL E N++++L R+V+ LS RL+
Sbjct: 205 EKINARMKLLQELVP-----GCDKIQGTALVLDEIINHVQTLQRQVEMLSMRLA 253
>sp|Q8GXT3|BH123_ARATH Transcription factor bHLH123 OS=Arabidopsis thaliana GN=BHLH123
PE=2 SV=1
Length = 454
Score = 29.3 bits (64), Expect = 8.1, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 7/68 (10%)
Query: 2 SSRRSRSRQSGSSRI--TDDQINDLVSKLQQLLPELRNNRSDKVSAGKVLQETCNYIRSL 59
+++R++S + S +++ D ++ LQQL+ K A VL E YI+ L
Sbjct: 329 AAKRAKSEAASPSPAFKRKEKMGDRIAALQQLVSPF-----GKTDAASVLSEAIEYIKFL 383
Query: 60 HREVDDLS 67
H++V LS
Sbjct: 384 HQQVSALS 391
>sp|Q9Y5J3|HEY1_HUMAN Hairy/enhancer-of-split related with YRPW motif protein 1 OS=Homo
sapiens GN=HEY1 PE=1 SV=1
Length = 304
Score = 29.3 bits (64), Expect = 8.4, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 19 DQINDLVSKLQQLLPE-LRNNRSDKVSAGKVLQETCNYIRSLH 60
D+IN+ +S+L++L+P S K+ ++LQ T ++++ LH
Sbjct: 63 DRINNSLSELRRLVPSAFEKQGSAKLEKAEILQMTVDHLKMLH 105
>sp|Q9FHE8|P2A06_ARATH Protein PHLOEM PROTEIN 2-LIKE A6 OS=Arabidopsis thaliana GN=PP2A6
PE=2 SV=1
Length = 392
Score = 28.9 bits (63), Expect = 8.7, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 23/37 (62%)
Query: 13 SSRITDDQINDLVSKLQQLLPELRNNRSDKVSAGKVL 49
S R +D IN +V K+QQLL + R++++ A + L
Sbjct: 161 SERTDNDFINSMVIKIQQLLENMAVRRNNEIEAQRKL 197
>sp|Q8AXV6|HEY1_DANRE Hairy/enhancer-of-split related with YRPW motif protein 1 OS=Danio
rerio GN=hey1 PE=2 SV=1
Length = 317
Score = 28.9 bits (63), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 19 DQINDLVSKLQQLLPE-LRNNRSDKVSAGKVLQETCNYIRSLH 60
D+IN+ +S+L++L+P S K+ ++LQ T ++++ LH
Sbjct: 62 DRINNSLSELRRLVPSAFEKQGSAKLEKAEILQMTVDHLKMLH 104
>sp|Q9TSZ2|HEY1_CANFA Hairy/enhancer-of-split related with YRPW motif protein 1 OS=Canis
familiaris GN=HEY1 PE=2 SV=1
Length = 304
Score = 28.9 bits (63), Expect = 9.0, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 19 DQINDLVSKLQQLLPE-LRNNRSDKVSAGKVLQETCNYIRSLH 60
D+IN+ +S+L++L+P S K+ ++LQ T ++++ LH
Sbjct: 63 DRINNSLSELRRLVPSAFEKQGSAKLEKAEILQMTVDHLKMLH 105
>sp|Q4J8P2|SYE_SULAC Glutamate--tRNA ligase OS=Sulfolobus acidocaldarius (strain ATCC
33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
GN=gltX PE=3 SV=1
Length = 567
Score = 28.9 bits (63), Expect = 9.4, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Query: 21 INDLVSKLQQLLPELRNNRSDKVSAGKVLQETCNYIRSLHREVD--DLSERLSELL 74
+N +VSK+ PELR+ D V K E NY+ SL E +L + E+L
Sbjct: 26 VNAVVSKIFAERPELRSKAKDIVEIAK---ELVNYVNSLDVESQKKELESKFPEML 78
>sp|P61672|MUTS_TREDE DNA mismatch repair protein MutS OS=Treponema denticola (strain
ATCC 35405 / CIP 103919 / DSM 14222) GN=mutS PE=3 SV=1
Length = 891
Score = 28.9 bits (63), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 28 LQQLLPELRNNRSDKVSAGK-VLQETCNYIRSLHREVDDLSERLSELLATTDTAQAAIIR 86
L+Q+ + N+ + A K V E C I S H + L+E ++EL AQAA++
Sbjct: 519 LKQIEDNINNSEERLIEAEKEVFDEVCTEIGSHHCFLQKLAEEVAELDVNQSFAQAAVLH 578
Query: 87 S 87
+
Sbjct: 579 A 579
>sp|Q2NL18|HEYL_BOVIN Hairy/enhancer-of-split related with YRPW motif-like protein
OS=Bos taurus GN=HEYL PE=2 SV=3
Length = 328
Score = 28.9 bits (63), Expect = 9.9, Method: Composition-based stats.
Identities = 15/43 (34%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Query: 19 DQINDLVSKLQQLLPE-LRNNRSDKVSAGKVLQETCNYIRSLH 60
D+IN +S+L++L+P S K+ +VLQ T ++++ LH
Sbjct: 57 DRINSSLSELRRLVPTAFEKQGSSKLEKAEVLQMTVDHLKMLH 99
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.125 0.318
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,679,093
Number of Sequences: 539616
Number of extensions: 804001
Number of successful extensions: 4368
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 119
Number of HSP's that attempted gapping in prelim test: 4319
Number of HSP's gapped (non-prelim): 165
length of query: 91
length of database: 191,569,459
effective HSP length: 61
effective length of query: 30
effective length of database: 158,652,883
effective search space: 4759586490
effective search space used: 4759586490
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 55 (25.8 bits)